RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPATA13 (Homo sapiens)

Ensembl gene IDs: ENSG00000182957, ENSG00000228741

Ensembl transcript IDs: ENST00000343003.10, ENST00000382095.8, ENST00000382108.8, ENST00000399949.6, ENST00000409126.5, ENST00000424834.6, ENST00000434675.5, ENST00000439928.2, ENST00000454083.1, ENST00000466831.2, ENST00000474317.1, ENST00000488060.1, ENST00000494772.5

Found 1717 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCAGGGGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATaGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGG +
Preference number: 1 (lower is better)
Translates to: SRGGFSCCLITRFRA*YRVPHLGHLIVGHG
Trigger: CCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
3UTR GCA 90 bp TGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTaGCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTG +
Preference number: 1 (lower is better)
Translates to: CSRHLLIISRGGFSC*LITRFRAWYRVPHL
Trigger: CAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
3UTR GCA 90 bp ACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTaGTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACAT +
Preference number: 1 (lower is better)
Translates to: TCSRHLLIISRGGFS*CLITRFRAWYRVPH
Trigger: ATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
3UTR GCA 90 bp AGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTaGAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAG +
Preference number: 1 (lower is better)
Translates to: SMWARCDFCSELLKA*RQEGIRLRDKASVQ
Trigger: CTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR GCA 90 bp CCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTTaGCTGAAAAGCAGTGGATTCTTGAGGATGCGTAAGTTGCTCTGC +
Preference number: 1 (lower is better)
Translates to: PTPGQSQCAAGFLPP*LKSSGFLRMRKLLC
Trigger: GCAGAGCAACTTACGCATCCTCAAGAATCCACTGCTTTTCAGGCAAGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR CCA 90 bp CCACAGCACCCAGCCTTGCATAGCAGTTTCTTAGGTTACAGCATGTaGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGG +
Preference number: 1 (lower is better)
Translates to: PQHPALHSSFLGYSM*ARCDFCSELLKACR
Trigger: CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTAACCTAAGAAACTGCTATGCAAGGCTGGGTGCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR GCA 90 bp CATAGCAGTTTCTTAGGTTACAGCATGTGGGCAAGATGTGATTTCTaGTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCCGACTC +
Preference number: 1 (lower is better)
Translates to: HSSFLGYSMWARCDF*SELLKACRQEGIRL
Trigger: GAGTCGGATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTAACCTAAGAAACTGCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR GCA 90 bp AAACCATGTGGCTGGTATCCCAGGGAAGCTCCAGCATACTACTGCTaGCCTCTTTCTAGTCCGCAGGCCAAAGACAAAGAAATCTACTGC +
Preference number: 1 (lower is better)
Translates to: KPCGWYPREAPAYYC*PLSSPQAKDKEIYC
Trigger: GCAGTAGATTTCTTTGTCTTTGGCCTGCGGACTAGAAAGAGGGCAGCAGTAGTATGCTGGAGCTTCCCTGGGATACCAGCCACATGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR GCA 90 bp AAGAAACCATGTGGCTGGTATCCCAGGGAAGCTCCAGCATACTACTaGTGCCCTCTTTCTAGTCCGCAGGCCAAAGACAAAGAAATCTAC +
Preference number: 1 (lower is better)
Translates to: KKPCGWYPREAPAYY*CPLSSPQAKDKEIY
Trigger: GTAGATTTCTTTGTCTTTGGCCTGCGGACTAGAAAGAGGGCAGCAGTAGTATGCTGGAGCTTCCCTGGGATACCAGCCACATGGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR GCA 90 bp CCTTGCCTGAAAAGCAGTGGATTCTTGAGGATGCGTAAGTTGCTCTaGACTGAGGACCCTGATGAAGGTGACAGATGCATCTTCTTTCTC +
Preference number: 1 (lower is better)
Translates to: PCLKSSGFLRMRKLL*TEDPDEGDRCIFFL
Trigger: GAGAAAGAAGATGCATCTGTCACCTTCATCAGGGTCCTCAGTGCAGAGCAACTTACGCATCCTCAAGAATCCACTGCTTTTCAGGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR GCA 90 bp AGGACCCTGATGAAGGTGACAGATGCATCTTCTTTCTCTCCACTTTaGTTGCAGGAAGAGGAACCTTGCAGGATGACATTTGCACTACCA +
Preference number: 1 (lower is better)
Translates to: RTLMKVTDASSFSPL*LQEEEPCRMTFALP
Trigger: TGGTAGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGAAAGAAGATGCATCTGTCACCTTCATCAGGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR TCA 90 bp TGTGACTTCATTGCTAAGGACGATGTCAGGAGCAGTGCGGCTCTTTaGGAGTGCCTTCTGACCAGTGCATTTTCATATTCACTGTATCAT +
Preference number: 1 (lower is better)
Translates to: CDFIAKDDVRSSAAL*ECLLTSAFSYSLYH
Trigger: ATGATACAGTGAATATGAAAATGCACTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCTCCTGACATCGTCCTTAGCAATGAAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR TCA 90 bp CCATGGAGGAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTaGCTCAAATCAGGAAGGAAGTTTGGCAAATGGAAGATGAGAATA +
Preference number: 1 (lower is better)
Translates to: PWRRLSVPFLSKWNT*LKSGRKFGKWKMRI
Trigger: TATTCTCATCTTCCATTTGCCAAACTTCCTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTCCTCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR TCA 90 bp GGAACACGTGACTCAAATCAGGAAGGAAGTTTGGCAAATGGAAGATaGGAATACTTGAGCCTTCCATTCTTGAAGAACTCAGGCATGTGG +
Preference number: 1 (lower is better)
Translates to: GTRDSNQEGSLANGR*EYLSLPFLKNSGMW
Trigger: CCACATGCCTGAGTTCTTCAAGAATGGAAGGCTCAAGTATTCTCATCTTCCATTTGCCAAACTTCCTTCCTGATTTGAGTCACGTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR TCA 90 bp CATGGTTATGCCCTGTTTGGCTTTATATGTGATAAAGGCAGCTTCTaGTTTCCAAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCA +
Preference number: 1 (lower is better)
Translates to: HGYALFGFICDKGSF*FPRSRTALAVFVTS
Trigger: TGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTTGGAAATCAGAAGCTGCCTTTATCACATATAAAGCCAAACAGGGCATAACCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR TCA 90 bp GCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCTaGCTGGGACACCAAGTTGATCTGCATGAAGGAGTATCAGCAATT +
Preference number: 1 (lower is better)
Translates to: AEILPLTPGNYAVLF*LGHQVDLHEGVSAI
Trigger: AATTGCTGATACTCCTTCATGCAGATCAACTTGGTGTCCCAGTCAGAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR GCA 90 bp CAGGTAATTATGCTGTTCTATTCTGACTGGGACACCAAGTTGATCTaGATGAAGGAGTATCAGCAATTTGGCTTGCAGAGATTTCCACCT +
Preference number: 1 (lower is better)
Translates to: QVIMLFYSDWDTKLI*MKEYQQFGLQRFPP
Trigger: AGGTGGAAATCTCTGCAAGCCAAATTGCTGATACTCCTTCATGCAGATCAACTTGGTGTCCCAGTCAGAATAGAACAGCATAATTACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR TCA 90 bp CTAAGGACGATGTCAGGAGCAGTGCGGCTCTTTGAGAGTGCCTTCTaGCCAGTGCATTTTCATATTCACTGTATCATAAATATTACAGTA +
Preference number: 1 (lower is better)
Translates to: LRTMSGAVRLFESAF*PVHFHIHCIINITV
Trigger: TACTGTAATATTTATGATACAGTGAATATGAAAATGCACTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCTCCTGACATCGTCCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CCA 90 bp ATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGTaGCCTTTGTTAATAAAGACTGCTATCTCTAAGCCAAGATATTTT +
Preference number: 1 (lower is better)
Translates to: IDKEKEMIICRCQPR*PLLIKTAISKPRYF
Trigger: AAAATATCTTGGCTTAGAGATAGCAGTCTTTATTAACAAAGGCCACCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR GCA 90 bp ATACAAACAACTCTAGCAGAGACCCCTACAGTTATTGCTAAGGTGTaGAGGAAAAGCATATTAAGTAGTTTCCAACATATATCATTGTAT +
Preference number: 1 (lower is better)
Translates to: IQTTLAETPTVIAKV*RKSILSSFQHISLY
Trigger: ATACAATGATATATGTTGGAAACTACTTAATATGCTTTTCCTGCACACCTTAGCAATAACTGTAGGGGTCTCTGCTAGAGTTGTTTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACAGGGGTGGCTTCAGCTaGTGCCTAATCACTCGCTTT +
Preference number: 2 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHRGGFS*CLITRF
Trigger: AAAGCGAGTGATTAGGCAGCAGCTGAAGCCACCCCT...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCCCTGCAGCAGGCACTTaGTCATCATCAGCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAPAAGT*SSSAGV
Trigger: CACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGG...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACGCATGTGTGCCAAGGTaGCTCAGAATGGACATCAGG +
Preference number: 2 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHACVPR*LRMDIR
Trigger: CCTGATGTCCATTCTGAGCCACCTTGGCACACATGC...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR TCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCAGCAGTGCGGCTCTTTaGGAGTGCCTTCTGACCAGT +
Preference number: 2 (lower is better)
Translates to: HLLSRALSGLKGHLSCRASSAAL*ECLLTS
Trigger: ACTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCT...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACGGTGGCTTCAGCTGCTaGCTAATCACTCGCTTTAGA +
Preference number: 2 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHGGFSC*LITRFR
Trigger: TCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCCCTGGATGCTGTGTTTaGACCTGCAGCAGGCACTTG +
Preference number: 2 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAPGCCV*TCSRHL
Trigger: CAAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGG...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR TCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAACAGCCATGGGGCACCTaGACCCTTAGCAGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKQPWGT*TLSSAA
Trigger: GGCAGCACTGCTAAGGGTTCAGGTGCCCCATGGCTG...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACTCTCTCCACTTTGCTTaGAGGAAGAGGAACCTTGCA +
Preference number: 2 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHSLHFA*RKRNLA
Trigger: TGCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGA...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTACTCGCTTTAGAGCATaGTACCGGGTCCCACATCTG +
Preference number: 2 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPTRFRA*YRVPHL
Trigger: CAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
3UTR-3UTR CCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGTGCCAGGGAACACCGTaGTCAGCCCCACGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: YSMWARCDFCSELLKACRCQGTP*SAPRQL
Trigger: CAGCTGCCGTGGGGCTGACCACGGTGTTCCCTGGCA...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR TCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCTCTGCTCGGAGTTACTaGAGGCGTGCAGGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSSARSY*RRAGRR
Trigger: CCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGA...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCACTCCTTAGGAACTaGAAAGCCCTGGATGCTGTG +
Preference number: 2 (lower is better)
Translates to: RAGRRESDSGTKPVCSRISLLRN*KALDAV
Trigger: CACAGCATCCAGGGCTTTGCAGTTCCTAAGGAGTGA...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTACTCGCTTTAGAGCATaGTACCGGGTCCCACATCTG +
Preference number: 2 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPTRFRA*YRVPHL
Trigger: CAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCTGCCAGGGAACACCGTaGTCAGCCCCACGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLCQGTP*SAPRQL
Trigger: CAGCTGCCGTGGGGCTGACCACGGTGTTCCCTGGCA...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CAA 90 bp GAACTGCAAAGCCCTGGATGCTGTGTTTGGACCTGCAGCAGGCACTaGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTAATCACT +
Preference number: 2 (lower is better)
Translates to: ELQSPGCCVWTCSRH*LIISRGGFSCCLIT
Trigger: AGTGATTAGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGGGCTTTGCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
3UTR-3UTR GCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCGGATTTCTCCCTCCTTaGCTGAAAAGCAGTGGATTC +
Preference number: 2 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAGFLPP*LKSSGF
Trigger: GAATCCACTGCTTTTCAGGCAAGGAGGGAGAAATCC...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGACATCATCAGCAGGGGTaGCTTCAGCTGCTGCCTAAT +
Preference number: 2 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRHHQQG*LQLLPN
Trigger: ATTAGGCAGCAGCTGAAGCCACCCCTGCTGATGATG...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR TCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCAGCAGTGCGGCTCTTTaGGAGTGCCTTCTGACCAGT +
Preference number: 2 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSSSAAL*ECLLTS
Trigger: ACTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCT...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR TCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCGATAAAGGCAGCTTCTaGTTTCCAAGAAGCAGGACT +
Preference number: 2 (lower is better)
Translates to: HLLSRALSGLKGHLSCRADKGSF*FPRSRT
Trigger: AGTCCTGCTTCTTGGAAATCAGAAGCTGCCTTTATC...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACGTGCCTTCTGACCAGTaGATTTTCATATTCACTGTA +
Preference number: 2 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHVPSDQ*IFIFTV
Trigger: TACAGTGAATATGAAAATGCACTGGTCAGAAGGCAC...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGACCTGGATGCTGTGTTTaGACCTGCAGCAGGCACTTG +
Preference number: 2 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGPGCCV*TCSRHL
Trigger: CAAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGG...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACATTATTAGTAGAGACTaGGCTTTGCCATATTGGCCA +
Preference number: 2 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHIISRD*ALPYWP
Trigger: TGGCCAATATGGCAAAGCCCAGTCTCTACTAATAAT...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGTGCTGTGTTTGGACCTaGAGCAGGCACTTGCTCATC +
Preference number: 2 (lower is better)
Translates to: MWARCDFCSELLKACRQECCVWT*SRHLLI
Trigger: GATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCA...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR GCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTTGTGGACACAGACGATaGCAGGGAACACCGTGGTCA +
Preference number: 2 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSCGHRR*QGTPWS
Trigger: TGACCACGGTGTTCCCTGGCATCGTCTGTGTCCACA...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCCAAGGTGGCTCAGAATaGACATCAGGCGGTCACAGA +
Preference number: 2 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSQGGSE*TSGGHR
Trigger: TCTGTGACCGCCTGATGTCCATTCTGAGCCACCTTG...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGGTCCGTGGAGGTAGGTaGGAGCCGGAAGTTAGGGCT +
Preference number: 2 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKVRGGR*EPEVRA
Trigger: AGCCCTAACTTCCGGCTCCCACCTACCTCCACGGAC...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR TCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCCTTCTCTCCTTCATTaGTCCCTAAAAGGAAGTTTT +
Preference number: 2 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCPSLLH*SLKGSF
Trigger: AAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGG...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
3UTR-3UTR GCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAAGGTGGCTTCAGCTGCTaGCTAATCACTCGCTTTAGA +
Preference number: 2 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKGGFSC*LITRFR
Trigger: TCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAATCACTCCTTAGGAACTaGAAAGCCCTGGATGCTGTG +
Preference number: 2 (lower is better)
Translates to: CDQTRAALCQPRLDGILESLLRN*KALDAV
Trigger: CACAGCATCCAGGGCTTTGCAGTTCCTAAGGAGTGA...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR GCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACACCCCCACACATaGCACAGGACCTCTCCAGAA +
Preference number: 2 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLTHPHT*HRTSPE
Trigger: TTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGT...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTACTCGCTTTAGAGCATaGTACCGGGTCCCACATCTG +
Preference number: 2 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSTRFRA*YRVPHL
Trigger: CAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTCCTGGATGCTGTGTTTaGACCTGCAGCAGGCACTTG +
Preference number: 2 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVAPGCCV*TCSRHL
Trigger: CAAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGG...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCATTATTAGTAGAGACTaGGCTTTGCCATATTGGCCA +
Preference number: 2 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAIISRD*ALPYWP
Trigger: TGGCCAATATGGCAAAGCCCAGTCTCTACTAATAAT...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CAA 90 bp TGTGCAGCAGGATTTCTCCCTCCTTGCCTGAAAAGCAGTGGATTCTaGAGGATGCGTAAGTTGCTCTGCACTGAGGACCCTGATGAAGGT +
Preference number: 2 (lower is better)
Translates to: CAAGFLPPCLKSSGF*RMRKLLCTEDPDEG
Trigger: ACCTTCATCAGGGTCCTCAGTGCAGAGCAACTTACGCATCCTCAAGAATCCACTGCTTTTCAGGCAAGGAGGGAGAAATCCTGCTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR TCA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCAAACTTTCCCTGGATTaGAGCACACAAGAAACAAAG +
Preference number: 2 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSKLSLD*STQETK
Trigger: CTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTT...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTTGCTGTGTTTGGACCTaGAGCAGGCACTTGCTCATC +
Preference number: 2 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVACCVWT*SRHLLI
Trigger: GATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCA...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR GCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCTCACTCCTTAGGAACTaGAAAGCCCTGGATGCTGTG +
Preference number: 2 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSSLLRN*KALDAV
Trigger: CACAGCATCCAGGGCTTTGCAGTTCCTAAGGAGTGA...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATACAGGAAGAGGAACCTTaGAGGATGACATTTGCACTA +
Preference number: 2 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIQEEEP*RMTFAL
Trigger: TAGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTG...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGATTTCTCCCTCCTTaGCTGAAAAGCAGTGGATTC +
Preference number: 2 (lower is better)
Translates to: MWARCDFCSELLKACRQEGFLPP*LKSSGF
Trigger: GAATCCACTGCTTTTCAGGCAAGGAGGGAGAAATCC...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR GCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGACACACCCCCACACATaGCACAGGACCTCTCCAGAA +
Preference number: 2 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKTHPHT*HRTSPE
Trigger: TTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGT...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CAA 90 bp GCATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTaGCAGAGCCTGCCTTCTCTAGACATAGTTAAAAGTTATATCATG +
Preference number: 2 (lower is better)
Translates to: ASPVQGTERVERAPL*QSLPSLDIVKSYIM
Trigger: CATGATATAACTTTTAACTATGTCTAGAGAAGGCAGGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR TCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAAAACTTTCCCTGGATTaGAGCACACAAGAAACAAAG +
Preference number: 2 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASKLSLD*STQETK
Trigger: CTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTT...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
3UTR-3UTR TCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAAAAAGCAGTGGATTCTTaGGGATGCGTAAGTTGCTCT +
Preference number: 2 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKKAVDS*GCVSCS
Trigger: AGAGCAACTTACGCATCCTCAAGAATCCACTGCTTT...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR TCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCAAAGCAGTGGATTCTTaGGGATGCGTAAGTTGCTCT +
Preference number: 2 (lower is better)
Translates to: ARCDFCSELLKACRQEGIKAVDS*GCVSCS
Trigger: AGAGCAACTTACGCATCCTCAAGAATCCACTGCTTT...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR GCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCTCACTCCTTAGGAACTaGAAAGCCCTGGATGCTGTG +
Preference number: 2 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLSLLRN*KALDAV
Trigger: CACAGCATCCAGGGCTTTGCAGTTCCTAAGGAGTGA...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAGGAAGTTTTTATCACTaGGTCCAAGAAACTTTCCCT +
Preference number: 2 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRGSFYH*VQETFP
Trigger: AGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCC...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCTGCCAGGGAACACCGTaGTCAGCCCCACGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFCQGTP*SAPRQL
Trigger: CAGCTGCCGTGGGGCTGACCACGGTGTTCCCTGGCA...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAGGTGTCAGCCTAGGTaGCCTTTGTTAATAAAGACT +
Preference number: 2 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIRCQPR*PLLIKT
Trigger: AGTCTTTATTAACAAAGGCCACCTAGGCTGACACCT...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CAA 90 bp GAGGACCCTGATGAAGGTGACAGATGCATCTTCTTTCTCTCCACTTaGCTTGCAGGAAGAGGAACCTTGCAGGATGACATTTGCACTACC +
Preference number: 2 (lower is better)
Translates to: EDPDEGDRCIFFLST*LAGRGTLQDDICTT
Trigger: GGTAGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGAAAGAAGATGCATCTGTCACCTTCATCAGGGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR TCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCTTCCAAGGGTTCACCTaGGGACCAAGGTTATGTTTT +
Preference number: 2 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSFQGFT*GPRLCF
Trigger: AAAACATAACCTTGGTCCTCAGGTGAACCCTTGGAA...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCATGCTGTGTTTGGACCTaGAGCAGGCACTTGCTCATC +
Preference number: 2 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSCCVWT*SRHLLI
Trigger: GATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCA...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR GCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAATGTGGACACAGACGATaGCAGGGAACACCGTGGTCA +
Preference number: 2 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKCGHRR*QGTPWS
Trigger: TGACCACGGTGTTCCCTGGCATCGTCTGTGTCCACA...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGATGAAGGTGACAGATaGATCTTCTTTCTCTCCACT +
Preference number: 2 (lower is better)
Translates to: MWARCDFCSELLKACRQEDEGDR*IFFLST
Trigger: AGTGGAGAGAAAGAAGATGCATCTGTCACCTTCATC...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR GCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAAGAGTTACTGAAGGCGTaGAGGCAGGAGGGAATCCGA +
Preference number: 2 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKELLKA*RQEGIR
Trigger: TCGGATTCCCTCCTGCCTGCACGCCTTCAGTAACTC...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCCTGATGACATaGTCACGTGACATGGTTATG +
Preference number: 2 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSRSLMT*SRDMVM
Trigger: CATAACCATGTCACGTGAGCATGTCATCAGGCTTCT...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATACCAAGAAACTTTCCCTaGATTGAAGCACACAAGAAA +
Preference number: 2 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIPRNFP*IEAHKK
Trigger: TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGG...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCAACTCGCTTTAGAGCATaGTACCGGGTCCCACATCTG +
Preference number: 2 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSTRFRA*YRVPHL
Trigger: CAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR CAA 90 bp ACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTaGAAAATCAAATGCAGAAGTGATCCTCTAACCTCATCACTCCTT +
Preference number: 2 (lower is better)
Translates to: TRHVQHCVNPVLTAS*KIKCRSDPLTSSLL
Trigger: AAGGAGTGATGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR TCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCAATCAAATGCAGAAGTaGTCCTCTAACCTCATCACT +
Preference number: 2 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSNQMQK*SSNLIT
Trigger: AGTGATGAGGTTAGAGGATCACTTCTGCATTTGATT...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR TCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTAAAGCAGTGGATTCTTaGGGATGCGTAAGTTGCTCT +
Preference number: 2 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVAKAVDS*GCVSCS
Trigger: AGAGCAACTTACGCATCCTCAAGAATCCACTGCTTT...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR TCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAATACACCTTTGTCTCTaGCATCACAGACTTGTTTAT +
Preference number: 2 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIIHLCL*HHRLVY
Trigger: ATAAACAAGTCTGTGATGTCAGAGACAAAGGTGTAT...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCAGAAGCCTGATGACATaGTCACGTGACATGGTTATG +
Preference number: 2 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLRSLMT*SRDMVM
Trigger: CATAACCATGTCACGTGAGCATGTCATCAGGCTTCT...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CAA 90 bp TTTCTAAGTGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTaGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACC +
Preference number: 2 (lower is better)
Translates to: FLSVTRHVQHCVNPV*TASLKIKCRSDPLT
Trigger: GGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACACTTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR TCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGAATCAAATGCAGAAGTaGTCCTCTAACCTCATCACT +
Preference number: 2 (lower is better)
Translates to: YSMWARCDFCSELLKACRNQMQK*SSNLIT
Trigger: AGTGATGAGGTTAGAGGATCACTTCTGCATTTGATT...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR TCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCCATGTGGGCAAGATGTaGTTTCTGCTCGGAGTTACT +
Preference number: 2 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVHVGKM*FLLGVT
Trigger: AGTAACTCCGAGCAGAAATCACATCTTGCCCACATG...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR TCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACACAGCCATGGGGCACCTaGACCCTTAGCAGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTQPWGT*TLSSAA
Trigger: GGCAGCACTGCTAAGGGTTCAGGTGCCCCATGGCTG...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATACCAAGAAACTTTCCCTaGATTGAAGCACACAAGAAA +
Preference number: 2 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIPRNFP*IEAHKK
Trigger: TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGG...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
3UTR-3UTR CCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCCAAGAAACTTTCCCTaGATTGAAGCACACAAGAAA +
Preference number: 2 (lower is better)
Translates to: YSMWARCDFCSELLKACRPRNFP*IEAHKK
Trigger: TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGG...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR GCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCTCCTTGAAAATCAAATaGAGAAGTGATCCTCTAACC +
Preference number: 2 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSSLKIK*RSDPLT
Trigger: GGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGA...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAAAAGGAGATGATTATCTaGAGGTGTCAGCCTAGGTGG +
Preference number: 2 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKKEMII*RCQPRW
Trigger: CCACCTAGGCTGACACCTGCAGATAATCATCTCCTT...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGGGAAGTTTTTATCACTaGGTCCAAGAAACTTTCCCT +
Preference number: 2 (lower is better)
Translates to: EAGESKIPNEIHTLSMEEGSFYH*VQETFP
Trigger: AGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCC...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR TCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACAAGCAGTGCGGCTCTTTaGGAGTGCCTTCTGACCAGT +
Preference number: 2 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTSSAAL*ECLLTS
Trigger: ACTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCT...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR TCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGATACACCTTTGTCTCTaGCATCACAGACTTGTTTAT +
Preference number: 2 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKIHLCL*HHRLVY
Trigger: ATAAACAAGTCTGTGATGTCAGAGACAAAGGTGTAT...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGTCCTTGAAAATCAAATaGAGAAGTGATCCTCTAACC +
Preference number: 2 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKSLKIK*RSDPLT
Trigger: GGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGA...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGGGATTTCTCCCTCCTTaGCTGAAAAGCAGTGGATTC +
Preference number: 2 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRGFLPP*LKSSGF
Trigger: GAATCCACTGCTTTTCAGGCAAGGAGGGAGAAATCC...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCACCAGAAGCTCCTTCCTaGAGCAACTTCTGTCTCAGG +
Preference number: 2 (lower is better)
Translates to: LENKLGLATKCKPFLHYPPEAPS*SNFCLR
Trigger: CCTGAGACAGAAGTTGCTGCAGGAAGGAGCTTCTGG...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACAAGGGGTGGCTTCAGCTaGTGCCTAATCACTCGCTTT +
Preference number: 2 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTRGGFS*CLITRF
Trigger: AAAGCGAGTGATTAGGCAGCAGCTGAAGCCACCCCT...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGGATGAAGGTGACAGATaGATCTTCTTTCTCTCCACT +
Preference number: 2 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRDEGDR*IFFLST
Trigger: AGTGGAGAGAAAGAAGATGCATCTGTCACCTTCATC...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR TCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCAGATAAAGGCAGCTTCTaGTTTCCAAGAAGCAGGACT +
Preference number: 2 (lower is better)
Translates to: LENKLGLATKCKPFLHYPDKGSF*FPRSRT
Trigger: AGTCCTGCTTCTTGGAAATCAGAAGCTGCCTTTATC...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACATCCAAGAAGCAGGACTaGTTTGGCTGTCTTTGTGAC +
Preference number: 2 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTSKKQD*FGCLCD
Trigger: GTCACAAAGACAGCCAAAGCAGTCCTGCTTCTTGGA...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCCACGTGACATGGTTATaGCCTGTTTGGCTTTATATG +
Preference number: 2 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFHVTWL*PVWLYM
Trigger: CATATAAAGCCAAACAGGGCATAACCATGTCACGTG...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR TCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCAAACTTTCCCTGGATTaGAGCACACAAGAAACAAAG +
Preference number: 2 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFKLSLD*STQETK
Trigger: CTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTT...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR TCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCACCTTCTCTCCTTCATTaGTCCCTAAAAGGAAGTTTT +
Preference number: 2 (lower is better)
Translates to: LENKLGLATKCKPFLHYPPSLLH*SLKGSF
Trigger: AAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGG...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACACACGTGACATGGTTATaGCCTGTTTGGCTTTATATG +
Preference number: 2 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTHVTWL*PVWLYM
Trigger: CATATAAAGCCAAACAGGGCATAACCATGTCACGTG...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCAATTATTAGTAGAGACTaGGCTTTGCCATATTGGCCA +
Preference number: 2 (lower is better)
Translates to: LENKLGLATKCKPFLHYPIISRD*ALPYWP
Trigger: TGGCCAATATGGCAAAGCCCAGTCTCTACTAATAAT...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR TCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACATTTGAGAGTGCCTTCTaGCCAGTGCATTTTCATATT +
Preference number: 2 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTFESAF*PVHFHI
Trigger: AATATGAAAATGCACTGGTCAGAAGGCACTCTCAAA...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR GCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACAGTGCCTTCTGACCAGTaGATTTTCATATTCACTGTA +
Preference number: 2 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTVPSDQ*IFIFTV
Trigger: TACAGTGAATATGAAAATGCACTGGTCAGAAGGCAC...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACGAAAGGGCACCTCTCTaGCAGAGCCTGCCTTCTCTA +
Preference number: 3 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHERAPL*QSLPSL
Trigger: TAGAGAAGGCAGGCTCTGCAAGAGAGGTGCCCTTTC...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR GCA 72 bp GCCCTGGATGCTGTGTTTGGACCTGCAGCAGGCACTTaGTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCC +
Preference number: 3 (lower is better)
Translates to: ALDAVFGPAAGT*SSSAGVASAAA
Trigger: GGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
3UTR-3UTR CAA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCACCTGCAGCAGGCACTaGCTCATCATCAGCAGGGGT +
Preference number: 3 (lower is better)
Translates to: HLLSRALSGLKGHLSCRATCSRH*LIISRG
Trigger: ACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGT...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCGAGCAGTGCGGCTCTTaGAGAGTGCCTTCTGACCAG +
Preference number: 3 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAEQCGS*RVPSDQ
Trigger: CTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCTC...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR GCA 72 bp CACACATGCCACAGGACCTCTCCAGAAGCTCCTTCCTaGAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCA +
Preference number: 3 (lower is better)
Translates to: HTCHRTSPEAPS*SNFCLRTCRAA
Trigger: TGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAGGAAGGAGCTTCTGGAGAGGTCCTGTGGCATGTGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACGCAGGAAGAGGAACCTaGCAGGATGACATTTGCACT +
Preference number: 3 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHAGRGT*QDDICT
Trigger: AGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTGC...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR TCA 72 bp GCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTaGAGGCGTGCAGGCAGGAGGGAATCCGACTCCGGG +
Preference number: 3 (lower is better)
Translates to: ACGQDVISARSY*RRAGRRESDSG
Trigger: CCCGGAGTCGGATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR TCA 72 bp TGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATaGTGGTCCACAGAAGCAACTCGGGCTGTCAGCCAT +
Preference number: 3 (lower is better)
Translates to: CSNFCLRTCRAA*WSTEATRAVSH
Trigger: ATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGACAGACACGTGCAGCATaGTGTCAACCCCGTCTTGAC +
Preference number: 3 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRQTRAA*CQPRLD
Trigger: GTCAAGACGGGGTTGACACAATGCTGCACGTGTCTG...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CAA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAGAGCAGTGCGGCTCTTaGAGAGTGCCTTCTGACCAG +
Preference number: 3 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIEQCGS*RVPSDQ
Trigger: CTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCTC...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR GCA 72 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTaGAGGCAGGAGGGAATCCGACTCCGGGACAAAGCC +
Preference number: 3 (lower is better)
Translates to: ARCDFCSELLKA*RQEGIRLRDKA
Trigger: GGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CAA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTTGTGTCAACCCCGTCTaGACGGCATCCTTGAAAATC +
Preference number: 3 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPCVNPV*TASLKI
Trigger: GATTTTCAAGGATGCCGTCAAGACGGGGTTGACACA...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR GCA 72 bp CACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTaGCTAATCACTCGCTTTAGAGCATGGTACCGGGTC +
Preference number: 3 (lower is better)
Translates to: HLLIISRGGFSC*LITRFRAWYRV
Trigger: GACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
3UTR GCA 72 bp AGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTaGTGCCTAATCACTCGCTTTAGAGCATGGTACCGG +
Preference number: 3 (lower is better)
Translates to: RHLLIISRGGFS*CLITRFRAWYR
Trigger: CCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
3UTR CCA 72 bp GGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATaGTACCGGGTCCCACATCTGGGCCATCTCATAGTG +
Preference number: 3 (lower is better)
Translates to: GFSCCLITRFRA*YRVPHLGHLIV
Trigger: CACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
3UTR-3UTR CAA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTAAGACAGTTCTTCTCTaGACACCCAGCTCCATGGAA +
Preference number: 3 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPKTVLL*TPSSME
Trigger: TTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTT...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CAA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCCCCTGGATGCTGTGTTaGGACCTGCAGCAGGCACTT +
Preference number: 3 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSPWMLC*DLQQAL
Trigger: AAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGGG...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCCAGACACGTGCAGCATaGTGTCAACCCCGTCTTGAC +
Preference number: 3 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSQTRAA*CQPRLD
Trigger: GTCAAGACGGGGTTGACACAATGCTGCACGTGTCTG...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCGTCTTTGTGACTTCATaGCTAAGGACGATGTCAGGA +
Preference number: 3 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAVFVTS*LRTMSG
Trigger: TCCTGACATCGTCCTTAGCAATGAAGTCACAAAGAC...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR GCA 72 bp TCAAGAAGGAAACATACACACACACACCCCCACACATaGCACAGGACCTCTCCAGAAGCTCCTTCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: SRRKHTHTHPHT*HRTSPEAPSCS
Trigger: GCTGCAGGAAGGAGCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR GCA 72 bp GGCTGGTATCCCAGGGAAGCTCCAGCATACTACTGCTaGCCTCTTTCTAGTCCGCAGGCCAAAGACAAAGAA +
Preference number: 3 (lower is better)
Translates to: GWYPREAPAYYC*PLSSPQAKDKE
Trigger: TTCTTTGTCTTTGGCCTGCGGACTAGAAAGAGGGCAGCAGTAGTATGCTGGAGCTTCCCTGGGATACCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGACCTGCAGCAGGCACTaGCTCATCATCAGCAGGGGT +
Preference number: 3 (lower is better)
Translates to: EAGESKIPNEIHTLSMEETCSRH*LIISRG
Trigger: ACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGT...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAGCAGGAAGAGGAACCTaGCAGGATGACATTTGCACT +
Preference number: 3 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIAGRGT*QDDICT
Trigger: AGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTGC...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGCAGGAAGAGGAACCTaGCAGGATGACATTTGCACT +
Preference number: 3 (lower is better)
Translates to: MWARCDFCSELLKACRQEAGRGT*QDDICT
Trigger: AGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTGC...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CAA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGTTCTCTCCACTTTGCTaGCAGGAAGAGGAACCTTGC +
Preference number: 3 (lower is better)
Translates to: MWARCDFCSELLKACRQEFSPLC*QEEEPC
Trigger: GCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGAA...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CAA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGGAAAGGGCACCTCTCTaGCAGAGCCTGCCTTCTCTA +
Preference number: 3 (lower is better)
Translates to: EAGESKIPNEIHTLSMEEERAPL*QSLPSL
Trigger: TAGAGAAGGCAGGCTCTGCAAGAGAGGTGCCCTTTC...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTACCTTCTCTCCTTCATaGATCCCTAAAAGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPTFSPS*IPKRKF
Trigger: AAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGT...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CAA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAGTCTTGACGGCATCCTaGAAAATCAAATGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRVLTAS*KIKCRS
Trigger: ACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGAC...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CAA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCTTGAGGATGCGTAAGTaGCTCTGCACTGAGGACCCT +
Preference number: 3 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLLRMRK*LCTEDP
Trigger: AGGGTCCTCAGTGCAGAGCAACTTACGCATCCTCAA...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCTCTGACATCACAGACTaGTTTATTCTCAAACATGGG +
Preference number: 3 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSSDITD*FILKHG
Trigger: CCCATGTTTGAGAATAAACAAGTCTGTGATGTCAGA...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR GCA 72 bp TTCTTAGGTTACAGCATGTGGGCAAGATGTGATTTCTaGTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGA +
Preference number: 3 (lower is better)
Translates to: FLGYSMWARCDF*SELLKACRQEG
Trigger: TCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTAACCTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CAA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGAAGACAGTTCTTCTCTaGACACCCAGCTCCATGGAA +
Preference number: 3 (lower is better)
Translates to: YSMWARCDFCSELLKACRKTVLL*TPSSME
Trigger: TTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTT...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CAA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAAAGACAGTTCTTCTCTaGACACCCAGCTCCATGGAA +
Preference number: 3 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIKTVLL*TPSSME
Trigger: TTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTT...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
3UTR-3UTR CAA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAACCTTCTCTCCTTCATaGATCCCTAAAAGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRTFSPS*IPKRKF
Trigger: AAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGT...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR-3UTR CAA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTACCTTCTCTCCTTCATaGATCCCTAAAAGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVATFSPS*IPKRKF
Trigger: AAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGT...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
3UTR-3UTR CAA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAAACCTGCAGCAGGCACTaGCTCATCATCAGCAGGGGT +
Preference number: 3 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKTCSRH*LIISRG
Trigger: ACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGT...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAGTCTTGACGGCATCCTaGAAAATCAAATGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIVLTAS*KIKCRS
Trigger: ACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGAC...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAACCTTCTCTCCTTCATaGATCCCTAAAAGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKITFSPS*IPKRKF
Trigger: AAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGT...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGAGTCTTGACGGCATCCTaGAAAATCAAATGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGVLTAS*KIKCRS
Trigger: ACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGAC...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAACAGACACGTGCAGCATaGTGTCAACCCCGTCTTGAC +
Preference number: 3 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKQTRAA*CQPRLD
Trigger: GTCAAGACGGGGTTGACACAATGCTGCACGTGTCTG...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR TCA 72 bp CTCCACTTTGCTTGCAGGAAGAGGAACCTTGCAGGATaGCATTTGCACTACCAGTTAGCATCTGTGTGGACA +
Preference number: 3 (lower is better)
Translates to: LHFACRKRNLAG*HLHYQLASVWT
Trigger: TGTCCACACAGATGCTAACTGGTAGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR TCA 72 bp CCAAGGGTTCACCTGAGGACCAAGGTTATGTTTTCTTaGTGCATGATGTCACTCTCAGGAACGGCTCTGGAT +
Preference number: 3 (lower is better)
Translates to: PRVHLRTKVMFS*CMMSLSGTALD
Trigger: ATCCAGAGCCGTTCCTGAGAGTGACATCATGCATCAAGAAAACATAACCTTGGTCCTCAGGTGAACCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR TCA 72 bp CAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTaGCCCTCACACTCTATAAAACTGACAGGGGCAACG +
Preference number: 3 (lower is better)
Translates to: QVGSTQERSLME*PSHSIKLTGAT
Trigger: CGTTGCCCCTGTCAGTTTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAAACCTTCTCTCCTTCATaGATCCCTAAAAGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKTFSPS*IPKRKF
Trigger: AAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGT...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGCCCTGGATGCTGTGTTaGGACCTGCAGCAGGCACTT +
Preference number: 3 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRPWMLC*DLQQAL
Trigger: AAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGGG...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCAGACCCCTACAGTTATaGCTAAGGTGTGCAGGAAAA +
Preference number: 3 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLRPLQL*LRCAGK
Trigger: TTTTCCTGCACACCTTAGCAATAACTGTAGGGGTCT...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGACCTTCTCTCCTTCATaGATCCCTAAAAGGAAGTTT +
Preference number: 3 (lower is better)
Translates to: YSMWARCDFCSELLKACRTFSPS*IPKRKF
Trigger: AAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGT...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR TCA 72 bp ATTGCTAAGGACGATGTCAGGAGCAGTGCGGCTCTTTaGGAGTGCCTTCTGACCAGTGCATTTTCATATTCA +
Preference number: 3 (lower is better)
Translates to: IAKDDVRSSAAL*ECLLTSAFSYS
Trigger: TGAATATGAAAATGCACTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCTCCTGACATCGTCCTTAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR GCA 72 bp GTCAACCCCGTCTTGACGGCATCCTTGAAAATCAAATaGAGAAGTGATCCTCTAACCTCATCACTCCTTAGG +
Preference number: 3 (lower is better)
Translates to: VNPVLTASLKIK*RSDPLTSSLLR
Trigger: CCTAAGGAGTGATGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGGGTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR CCA 72 bp CCAGCCTTGCATAGCAGTTTCTTAGGTTACAGCATGTaGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAG +
Preference number: 3 (lower is better)
Translates to: PALHSSFLGYSM*ARCDFCSELLK
Trigger: CTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTAACCTAAGAAACTGCTATGCAAGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR TCA 72 bp AGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTaGCTCAAATCAGGAAGGAAGTTTGGCAAATGGAAG +
Preference number: 3 (lower is better)
Translates to: RLSVPFLSKWNT*LKSGRKFGKWK
Trigger: CTTCCATTTGCCAAACTTCCTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR TCA 72 bp CTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCTaGCTGGGACACCAAGTTGATCTGCATGAAGGAGTA +
Preference number: 3 (lower is better)
Translates to: LPLTPGNYAVLF*LGHQVDLHEGV
Trigger: TACTCCTTCATGCAGATCAACTTGGTGTCCCAGTCAGAATAGAACAGCATAATTACCTGGAGTTAGGGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGTTCTCTCCACTTTGCTaGCAGGAAGAGGAACCTTGC +
Preference number: 3 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRFSPLC*QEEEPC
Trigger: GCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGAA...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR TCA 72 bp GCCCTGTTTGGCTTTATATGTGATAAAGGCAGCTTCTaGTTTCCAAGAAGCAGGACTGCTTTGGCTGTCTTT +
Preference number: 3 (lower is better)
Translates to: ALFGFICDKGSF*FPRSRTALAVF
Trigger: AAAGACAGCCAAAGCAGTCCTGCTTCTTGGAAATCAGAAGCTGCCTTTATCACATATAAAGCCAAACAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR TCA 72 bp TTGACTTGGGTCCTCCATTTCTGGCCTGTGAGCTGGTaGAAGGACATTTATTCATACTTCTTGACACTCCTT +
Preference number: 3 (lower is better)
Translates to: LTWVLHFWPVSW*KDIYSYFLTLL
Trigger: AAGGAGTGTCAAGAAGTATGAATAAATGTCCTTTCACCAGCTCACAGGCCAGAAATGGAGGACCCAAGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGAAGACAGTTCTTCTCTaGACACCCAGCTCCATGGAA +
Preference number: 3 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRKTVLL*TPSSME
Trigger: TTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTT...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACAAGACAGTTCTTCTCTaGACACCCAGCTCCATGGAA +
Preference number: 3 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHKTVLL*TPSSME
Trigger: TTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTT...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
3UTR-3UTR CAA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCTTCTCTCCACTTTGCTaGCAGGAAGAGGAACCTTGC +
Preference number: 3 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFFSPLC*QEEEPC
Trigger: GCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGAA...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAACTGAAGAATACACCTTaGTCTCTGACATCACAGACT +
Preference number: 3 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKLKNTP*SLTSQT
Trigger: AGTCTGTGATGTCAGAGACAAAGGTGTATTCTTCAG...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CCA 72 bp GAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGTaGCCTTTGTTAATAAAGACTGCTATCTCTAAGCCA +
Preference number: 3 (lower is better)
Translates to: EKEMIICRCQPR*PLLIKTAISKP
Trigger: TGGCTTAGAGATAGCAGTCTTTATTAACAAAGGCCACCTAGGCTGACACCTGCAGATAATCATCTCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGAAAAGCAGTGGATTCTaGAGGATGCGTAAGTTGCTC +
Preference number: 3 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRKSSGF*RMRKLL
Trigger: GAGCAACTTACGCATCCTCAAGAATCCACTGCTTTT...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCGACTGGGACACCAAGTaGATCTGCATGAAGGAGTAT +
Preference number: 3 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFDWDTK*ICMKEY
Trigger: ATACTCCTTCATGCAGATCAACTTGGTGTCCCAGTC...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR-3UTR CAA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACATGTGTCAACCCCGTCTaGACGGCATCCTTGAAAATC +
Preference number: 3 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTCVNPV*TASLKI
Trigger: GATTTTCAAGGATGCCGTCAAGACGGGGTTGACACA...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR TCA 72 bp GACTCAAATCAGGAAGGAAGTTTGGCAAATGGAAGATaGGAATACTTGAGCCTTCCATTCTTGAAGAACTCA +
Preference number: 3 (lower is better)
Translates to: DSNQEGSLANGR*EYLSLPFLKNS
Trigger: TGAGTTCTTCAAGAATGGAAGGCTCAAGTATTCTCATCTTCCATTTGCCAAACTTCCTTCCTGATTTGAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CCA 72 bp AGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTaGATTGAAGCACACAAGAAACAAAGACAGTTCTTC +
Preference number: 3 (lower is better)
Translates to: RKFLSLGPRNFP*IEAHKKQRQFF
Trigger: GAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
3UTR GCA 72 bp ACTCTAGCAGAGACCCCTACAGTTATTGCTAAGGTGTaGAGGAAAAGCATATTAAGTAGTTTCCAACATATA +
Preference number: 3 (lower is better)
Translates to: TLAETPTVIAKV*RKSILSSFQHI
Trigger: TATATGTTGGAAACTACTTAATATGCTTTTCCTGCACACCTTAGCAATAACTGTAGGGGTCTCTGCTAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCAGTGGTCCCATGCATaGCCGCCCCGCCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCQWSHA*PPRPAC
Trigger: GCAGGCGGGGCGGGGCGGTCATGCATGGGACCACTG...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTGCTCCCCGCCGGGCTaGAGGTACCGAGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRICSPPG*RYRGLA
Trigger: GGCCAGCCCTCGGTACCTGCAGCCCGGCGGGGAGCA...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTGCTCCCCGCCGGGCTaGAGGTACCGAGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPCSPPG*RYRGLA
Trigger: GGCCAGCCCTCGGTACCTGCAGCCCGGCGGGGAGCA...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCAGAGCCACCTCCGGTaGCGGCGGAGCCCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCQSHLR*RRSPEV
Trigger: GACCTCGGGGCTCCGCCGGCACCGGAGGTGGCTCTG...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382095.8
ENST00000382108.8
CDS-3UTR TCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACCAGCCATGGGGCACCTaGACCCTTAGCAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHQPWGT*TLSSAA
Trigger: GGCAGCACTGCTAAGGGTTCAGGTGCCCCATGGCTG...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACCGCCCCGCCCCGCCTaGTGTCCTGCTCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPPPRPA*CPAQCS
Trigger: GGAGCACTGAGCAGGACAGCAGGCGGGGCGGGGCGG...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCACAGCTGGCACTTCCTaGCCCGGGGCTCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRATAGTS*PGALGA
Trigger: AGCCCCCAGAGCCCCGGGGCAGGAAGTGCCAGCTGT...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCGGGCTCCTGGGTaGCCACGGGCTCCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPHRAPG*PRAPAA
Trigger: CGCCGCAGGAGCCCGTGGCCACCCAGGAGCCCGATG...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382108.8
CDS-3UTR CCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACTGTGCCCCACTCTGCTaGCCTGAGGGCACCACATGC +
Preference number: 4 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHCAPLC*PEGTTC
Trigger: GCATGTGGTGCCCTCAGGCCAGCAGAGTGGGGCACA...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCCCCACTCTGCTGGCCTaGGGGCACCACATGCTGGTC +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAPTLLA*GHHMLV
Trigger: GACCAGCATGTGGTGCCCTCAGGCCAGCAGAGTGGG...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGTGCTCCCCGCCGGGCTaGAGGTACCGAGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKCSPPG*RYRGLA
Trigger: GGCCAGCCCTCGGTACCTGCAGCCCGGCGGGGAGCA...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTTGCTCCCCGCCGGGCTaGAGGTACCGAGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGCSPPG*RYRGLA
Trigger: GGCCAGCCCTCGGTACCTGCAGCCCGGCGGGGAGCA...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACGGCTGGCAGAAGTCATaGTTGCCTGGGGGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHGWQKS*LPGGPR
Trigger: ACGAGGACCCCCAGGCAAGCATGACTTCTGCCAGCC...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCGAATGGCCGAGGCCTTaGCCGTCTCCCAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAEWPRP*PSPRAP
Trigger: TGGGGCTCTGGGAGACGGCCAAGGCCTCGGCCATTC...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACTTCTCCGGGCTCCTTTaGGGCAGCCCACTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHFSGLL*GSPLEH
Trigger: ATGCTCCAGTGGGCTGCCCCAAAGGAGCCCGGAGAA...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTTGCTCTGGGAGAATGTaGAGGGCCGGAACCGGGCCG +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPCSGRM*RAGTGP
Trigger: CGGCCCGGTTCCGGCCCTTCACATTCTCCCAGAGCA...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACAGCATCACAGAGGACTaGACAGGCTGGCAGCTACGG +
Preference number: 4 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHSITED*TGWQLR
Trigger: CCGTAGCTGCCAGCCTGTGCAGTCCTCTGTGATGCT...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343003.10
CDS-3UTR GCA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCTCATTGATGGCCAGCTaGTCCCCGCCGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSSLMAS*SPPGCR
Trigger: CCTGCAGCCCGGCGGGGAGCAGCTGGCCATCAATGA...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCCTGGCCTCCTCGTCCTaGTCCTCACTGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSLASSS*SSLGVL
Trigger: CAGCACCCCCAGTGAGGAGCAGGACGAGGAGGCCAG...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCAGGCCAAAGACCTGCTaGTGGGGGACGCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRARPKTC*WGTLVG
Trigger: GCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCT...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAGAGCCTGGGATCCAGTaGGCGCCCTCGGAGCTAGCG +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKREPGIQ*APSELA
Trigger: CGCTAGCTCCGAGGGCGCGCACTGGATCCCAGGCTC...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382095.8
ENST00000382108.8
CDS-3UTR GCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTGAGCCTGGGATCCAGTaGGCGCCCTCGGAGCTAGCG +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAEPGIQ*APSELA
Trigger: CGCTAGCTCCGAGGGCGCGCACTGGATCCCAGGCTC...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382095.8
ENST00000382108.8
CDS-3UTR GCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATACCAGGCCGTAGGCTCTaGGGAGGCTGCGGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIPGRRL*GGCGSG
Trigger: ACCGCTCCCGCAGCCTCCGCAGAGCCTACGGCCTGG...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTCCCCGCCTGCTGTCCTaGTCAGTGCTCCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPPRLLS*SVLLET
Trigger: CGTCTCCAGGAGCACTGAGCAGGACAGCAGGCGGGG...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGACCGCCCCGCCCCGCCTaGTGTCCTGCTCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGPPRPA*CPAQCS
Trigger: GGAGCACTGAGCAGGACAGCAGGCGGGGCGGGGCGG...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCTGTCTGTGGCGGCTCTaGCTGGCCTCCTCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSCLWRL*LASSSC
Trigger: GCAGGACGAGGAGGCCAGCCAGAGCCGCCACAGACA...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGATGGGGTGCAGGCCCTaGTGCGGTGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKMGCRP*CGGATG
Trigger: CCCTGTGGCCCCACCGCACCAGGGCCTGCACCCCAT...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCGAACGGCTCTGGATGTaGGGGGCTGCAGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAERLWM*GAAGEK
Trigger: CTTCTCCCCTGCAGCCCCCCACATCCAGAGCCGTTC...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTCGGGCACCTGGCCAGTaGCTATCGTGGGTGTCGCAT +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIRAPGQ*LSWVSH
Trigger: ATGCGACACCCACGATAGCCACTGGCCAGGTGCCCG...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCCGGGCACCTGGCCAGTaGCTATCGTGGGTGTCGCAT +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRARAPGQ*LSWVSH
Trigger: ATGCGACACCCACGATAGCCACTGGCCAGGTGCCCG...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCCAGGCATGGGCGGCCTaGAAGCCGGTTGGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAQAWAA*KPVGSE
Trigger: TTCTGACCCAACCGGCTTCCAGGCCGCCCATGCCTG...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTCCTGGTGAGCAGGCATaGGCGGCCTGGAAGCCGGTT +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPPGEQA*AAWKPV
Trigger: AACCGGCTTCCAGGCCGCCCATGCCTGCTCACCAGG...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAAGCAGGACTGGGGTGTaGCCGAGGAGCCGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVSRTGV*PRSRSP
Trigger: TGGGGACCGGCTCCTCGGTCACACCCCAGTCCTGCT...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR TCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGAGCAGGACTGGGGTGTaGCCGAGGAGCCGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKSRTGV*PRSRSP
Trigger: TGGGGACCGGCTCCTCGGTCACACCCCAGTCCTGCT...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR TCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTCGTCATGGGCCGTCCTaGGGTCTGCAAGATTGGAGG +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIRHGPS*GLQDWR
Trigger: CCTCCAATCTTGCAGACCTCAGGACGGCCCATGACG...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGTGGTCCCATGCATaGCCGCCCCGCCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRQWSHA*PPRPAC
Trigger: GCAGGCGGGGCGGGGCGGTCATGCATGGGACCACTG...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCCCCTTAGAGGTGGCTaGGCCGAAACCGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGPLRGG*AETGGH
Trigger: GTGGCCCCCGGTTTCGGCTCAGCCACCTCTAAGGGG...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGCCCCTTAGAGGTGGCTaGGCCGAAACCGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKPLRGG*AETGGH
Trigger: GTGGCCCCCGGTTTCGGCTCAGCCACCTCTAAGGGG...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCTGCTCCCCGCCGGGCTaGAGGTACCGAGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLCSPPG*RYRGLA
Trigger: GGCCAGCCCTCGGTACCTGCAGCCCGGCGGGGAGCA...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCAGGCCAAAGACCTGCTaGTGGGGGACGCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSRPKTC*WGTLVG
Trigger: GCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCT...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTGTGGCCACGGGCTCCTaGGGCGCCTCTTGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSVATGS*GASWRS
Trigger: GCTCCGCCAAGAGGCGCCGCAGGAGCCCGTGGCCAC...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382108.8
CDS-3UTR GCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCGTTCTCCAGGCAGGGTaGCCAGGGCCGCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGIVLQAG*PGPHGS
Trigger: GCTGCCGTGCGGCCCTGGGCACCCTGCCTGGAGAAC...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCGGGGGAGCCCCTGCTTaGCTGGGCTCCTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGIGGAPA*LGSWDS
Trigger: GCTGTCCCAGGAGCCCAGGCAAGCAGGGGCTCCCCC...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAGTTGCAGTGGTCCCATaGATGACCGCCCCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVVAVVP*MTAPPR
Trigger: GCGGGGCGGGGCGGTCATGCATGGGACCACTGCAAC...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTGGCAGAAGTCATGCTTaGCTGGGGGTCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIGRSHA*LGVLVH
Trigger: GTGGACGAGGACCCCCAGGCAAGCATGACTTCTGCC...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTGAGGACTGCACAGGCTaGCAGCTACGGGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPEDCTG*QLRELQ
Trigger: CTGCAGTTCCCGTAGCTGCCAGCCTGTGCAGTCCTC...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR CCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTGTCTGTGGCGGCTCTaGCTGGCCTCCTCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVACLWRL*LASSSC
Trigger: GCAGGACGAGGAGGCCAGCCAGAGCCGCCACAGACA...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTTCTCACAGTGTCTGTaGCGGCTCTGGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIFSQCL*RLWLAS
Trigger: GGAGGCCAGCCAGAGCCGCCACAGACACTGTGAGAA...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCTTCTCACAGTGTCTGTaGCGGCTCTGGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCFSQCL*RLWLAS
Trigger: GGAGGCCAGCCAGAGCCGCCACAGACACTGTGAGAA...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTAGGCAGGCGCCCGGGTaGTTGTTGCAGTACTCGGAA +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIRQAPG*LLQYSE
Trigger: TTCCGAGTACTGCAACAACCACCCGGGCGCCTGCCT...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTAGGCAGGCGCCCGGGTaGTTGTTGCAGTACTCGGAA +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPRQAPG*LLQYSE
Trigger: TTCCGAGTACTGCAACAACCACCCGGGCGCCTGCCT...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGATGGGGTGCAGGCCCTaGTGCGGTGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKMGCRP*CGGATG
Trigger: CCCTGTGGCCCCACCGCACCAGGGCCTGCACCCCAT...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAATGGGGTGCAGGCCCTaGTGCGGTGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILEMGCRP*CGGATG
Trigger: CCCTGTGGCCCCACCGCACCAGGGCCTGCACCCCAT...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGTGTGGCGCTGGTGGATaGGGTGCAGGCCCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKCGAGG*GAGPGA
Trigger: CGCACCAGGGCCTGCACCCCATCCACCAGCGCCACA...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTATAGTGATGTGGCGCTaGTGGATGGGGTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIIVMWR*WMGCRP
Trigger: GGGCCTGCACCCCATCCACCAGCGCCACATCACTAT...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTGTGGGCATAGTGATGTaGCGCTGGTGGATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPVGIVM*RWWMGC
Trigger: GCACCCCATCCACCAGCGCCACATCACTATGCCCAC...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTGCCAGGGAACACCGTaGTCAGCCCCACGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVACQGTP*SAPRQL
Trigger: CAGCTGCCGTGGGGCTGACCACGGTGTTCCCTGGCA...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTTGCACATCGGGCTCCTaGGTGGCCACGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGCTSGS*VATGSC
Trigger: GCAGGAGCCCGTGGCCACCCAGGAGCCCGATGTGCA...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382108.8
CDS-3UTR CCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAGGCCGCACGGCAGCCTaGGTCATGGCCACGGGCACT +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILEGRTAA*VMATGT
Trigger: AGTGCCCGTGGCCATGACCCAGGCTGCCGTGCGGCC...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCTGGGGCCGCTCGGGGTaGGCACCCGTCCTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSWGRSG*APVLFR
Trigger: TCGGAAGAGGACGGGTGCCCACCCCGAGCGGCCCCA...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAACCAGGACCATGGAGTaGGGCCGCTCGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVTRTME*GRSGWA
Trigger: TGCCCACCCCGAGCGGCCCCACTCCATGGTCCTGGT...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAGAGCCCCTGCTTGCCTaGGCTCCTGGGACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVEPLLA*APGTAP
Trigger: TGGCGCTGTCCCAGGAGCCCAGGCAAGCAGGGGCTC...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCGGCCAGTGGCTATCGTaGGTGTCGCATGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCGQWLS*VSHGSG
Trigger: CCCAGAACCATGCGACACCCACGATAGCCACTGGCC...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTGTGTCAGCGTCTAGGTaGGGCCCCTTAGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIVSASR*GPLEVA
Trigger: AGCCACCTCTAAGGGGCCCCACCTAGACGCTGACAC...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTACCTGGTGAGCAGGCATaGGCGGCCTGGAAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVPGEQA*AAWKPA
Trigger: AGCCGGCTTCCAGGCCGCCCATGCCTGCTCACCAGG...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434675.5
CDS-3UTR TCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCAGCAGGACTGGGGTGTaGCCGAGGAGCCGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSSRTGV*PRSRSP
Trigger: TGGGGACCGGCTCCTCGGTCACACCCCAGTCCTGCT...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343003.10
CDS-3UTR TCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCTCTTCTGCACTGGTGTaGGCAGGAACCCGTCGATGG +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRASSALV*AGTRRW
Trigger: CCATCGACGGGTTCCTGCTCACACCAGTGCAGAAGA...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCCTGTGTGGTATACTTaGGCAGCTCGGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCPVWYT*AARPAA
Trigger: TGCAGCTGGCCGAGCTGCTCAAGTATACCACACAGG...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR TCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTCCTGTGTGGTATACTTaGGCAGCTCGGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPPVWYT*AARPAA
Trigger: TGCAGCTGGCCGAGCTGCTCAAGTATACCACACAGG...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTCGGCCAGGATGTTTGTaGGGCCTACGCTTTGCCATC +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIRPGCL*GLRFAI
Trigger: GATGGCAAAGCGTAGGCCTCACAAACATCCTGGCCG...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS-3UTR GCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAAGGCCAAAGACCTGCTaGTGGGGGACGCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPRPKTC*WGTLVG
Trigger: GCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCT...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAGCCAGGCCAAAGACCTaGTGCTGGGGGACGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPARPKT*CWGTLV
Trigger: CACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCTGGC...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTCCTGCAGCAGGCACTTaGTCATCATCAGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPPAAGT*SSSAGV
Trigger: CACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGG...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAACATGGCCACGGGCACTaGCGAGTCCGCAGACCGCAG +
Preference number: 4 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKHGHGH*RVRRPQ
Trigger: CTGCGGTCTGCGGACTCGGCAGTGCCCGTGGCCATG...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCTTTCAGGTCCGAGCCTaGACAGGGGGCTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGIFQVRA*TGGCGA
Trigger: GGCCCCGCAGCCCCCTGTGCAGGCTCGGACCTGAAA...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCTGTCGCCACCAGGGCTaGAGCCACAGACTCCATTTC +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRACRHQG*SHRLHF
Trigger: GAAATGGAGTCTGTGGCTGCAGCCCTGGTGGCGACA...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTGGGGGAGCCCCTGCTTaGCTGGGCTCCTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSGGAPA*LGSWDS
Trigger: GCTGTCCCAGGAGCCCAGGCAAGCAGGGGCTCCCCC...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAAGGCTCTGCGGAGGCTaGGGGAGCGGTGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILERLCGG*GSGVCS
Trigger: GGAGCACACACCGCTCCCGCAGCCTCCGCAGAGCCT...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCATTGGATGCTCTCATCTaGCGCCGGCGTCCCACACGG +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPLDALI*RRRPTR
Trigger: CCGTGTGGGACGCCGGCGGCAGATGAGAGCATCCAA...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTATGTCTGTGGCGGCTCTaGCTGGCCTCCTCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVCLWRL*LASSSC
Trigger: GCAGGACGAGGAGGCCAGCCAGAGCCGCCACAGACA...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACCAGGACACCAGCTGGTaGTCAAACAGGAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHQDTSW*SNRKNV
Trigger: GACGTTCTTCCTGTTTGACCACCAGCTGGTGTCCTG...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTATGGGGTGCAGGCCCTaGTGCGGTGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSMGCRP*CGGATG
Trigger: CCCTGTGGCCCCACCGCACCAGGGCCTGCACCCCAT...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAATGTGGCGCTGGTGGATaGGGTGCAGGCCCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKCGAGG*GAGPGA
Trigger: CGCACCAGGGCCTGCACCCCATCCACCAGCGCCACA...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGATGTGGCGCTGGTGGATaGGGTGCAGGCCCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGCGAGG*GAGPGA
Trigger: CGCACCAGGGCCTGCACCCCATCCACCAGCGCCACA...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCTGTGGCGCTGGTGGATaGGGTGCAGGCCCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGICGAGG*GAGPGA
Trigger: CGCACCAGGGCCTGCACCCCATCCACCAGCGCCACA...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAGTGATGTGGCGCTGGTaGATGGGGTGCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVVMWRW*MGCRPW
Trigger: CCAGGGCCTGCACCCCATCCACCAGCGCCACATCAC...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTCCAAAGACCTGCTGCTaGGGGACGCTTGTGGGCATA +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPPKTCC*GTLVGI
Trigger: TATGCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGG...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTGCGAGGACTTCCTCTTaGGTTCCGCCAGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPARTSS*VPPGQR
Trigger: TCTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGC...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTGTCCGTGGAGGTAGGTaGGAGCCGGAAGTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPVRGGR*EPEVRA
Trigger: AGCCCTAACTTCCGGCTCCCACCTACCTCCACGGAC...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTGGCCGTTTGGGGCAGTaGTCATGTTCTCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPGRLGQ*SCSPGR
Trigger: CCTGCCTGGAGAACATGACCACTGCCCCAAACGGCC...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTCGAGGGTGTTCCATGTaGAGGAGTTCCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIRGCSM*RSSPPG
Trigger: TCCTGGTGGGGAACTCCTCCACATGGAACACCCTCG...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAGGTGTCGCATGGTTCTaGGGCGCATCCAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPGVAWF*GASSRQ
Trigger: CTGCCTGCTGGATGCGCCCCAGAACCATGCGACACC...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGGGCCTCTCCAGGGGATaGGGCCCCACTCCTAGGACT +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKGLSRG*GPTPRT
Trigger: AGTCCTAGGAGTGGGGCCCCATCCCCTGGAGAGGCC...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTCCTGAAGTCTCAGGCTaGCCTCTCCAGGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAPEVSG*PLQGMG
Trigger: CCCCATCCCCTGGAGAGGCCAGCCTGAGACTTCAGG...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGACCTGCTCAGTGCTCCTaGAGACGCGGCGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRPAQCS*RRGGSS
Trigger: ACTACTCCCGCCGCGTCTCCAGGAGCACTGAGCAGG...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACCTTCTCCTTTTCTTCTaGGCCGGCTGCCACACCAAT +
Preference number: 4 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHLLLFF*AGCHTN
Trigger: ATTGGTGTGGCAGCCGGCCCAGAAGAAAAGGAGAAG...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTGCCGTAGTCAGAGAATaGCCGAGGCCTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPAVVRE*PRPWPS
Trigger: AGACGGCCAAGGCCTCGGCCATTCTCTGACTACGGC...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CAA 72 bp AGCCCTGGATGCTGTGTTTGGACCTGCAGCAGGCACTaGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SPGCCVWTCSRH*LIISRGGFSCC
Trigger: GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR TCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTTCTTCTGCACTGGTGTaGGCAGGAACCCGTCGATGG +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPSSALV*AGTRRW
Trigger: CCATCGACGGGTTCCTGCTCACACCAGTGCAGAAGA...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCCCTGTGTGGTATACTTaGGCAGCTCGGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSPVWYT*AARPAA
Trigger: TGCAGCTGGCCGAGCTGCTCAAGTATACCACACAGG...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCTGCGCTTGCGCTCGTTaGTCAGACAGGCCACATTCT +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCCACAR*SDRPHS
Trigger: AGAATGTGGCCTGTCTGATCAACGAGCGCAAGCGCA...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR TCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCTGCTCGGAGTTACTaGAGGCGTGCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVASARSY*RRAGRR
Trigger: CCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGA...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCAGCAGTGCGGCTCTTTaGGAGTGCCTTCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCSSAAL*ECLLTS
Trigger: ACTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCT...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAATCATTGATGGCCAGCTaGTCCCCGCCGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILESLMAS*SPPGCR
Trigger: CCTGCAGCCCGGCGGGGAGCAGCTGGCCATCAATGA...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGTCATTGATGGCCAGCTaGTCCCCGCCGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKSLMAS*SPPGCR
Trigger: CCTGCAGCCCGGCGGGGAGCAGCTGGCCATCAATGA...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAGTCCCACAGGGCTTCTaGGCAGACCACGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPVPQGF*ADHVAI
Trigger: GATGGCAACGTGGTCTGCGCAGAAGCCCTGTGGGAC...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTCTTCCTTATCTTCACTaGGGCCCCACCACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPLPYLH*GPTTSP
Trigger: AGGACTGGTGGTGGGGCCGCAGTGAAGATAAGGAAG...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTCCTCACTGGGGGTGCTaGTGGAGTTTTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPPHWGC*WSFPTA
Trigger: AGCTGTCGGAAAACTCCAGCAGCACCCCCAGTGAGG...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCCTGGCCTCCTCGTCCTaGTCCTCACTGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGILASSS*SSLGVL
Trigger: CAGCACCCCCAGTGAGGAGCAGGACGAGGAGGCCAG...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTAGTACAGCATGTCCCTaGGCAGCAGGTCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPSTACP*AAGPSC
Trigger: GCAAGAAGGACCTGCTGCGCAGGGACATGCTGTACT...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAAGGCCAAAGACCTGCTaGTGGGGGACGCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVRPKTC*WGTLVG
Trigger: GCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCT...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAGCCAGGCCAAAGACCTaGTGCTGGGGGACGCTTGTG +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVARPKT*CWGTLV
Trigger: CACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCTGGC...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACTCACTCCTTAGGAACTaGAAAGCCCTGGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHSLLRN*KALDAV
Trigger: CACAGCATCCAGGGCTTTGCAGTTCCTAAGGAGTGA...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCGAGTTACTGAAGGCGTaGAGGCAGGAGGGAATCCGA +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAELLKA*RQEGIR
Trigger: TCGGATTCCCTCCTGCCTGCACGCCTTCAGTAACTC...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCACCTGGCACTCACACCTaGCTTGCACATCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASPGTHT*LAHRAP
Trigger: AGGAGCCCGATGTGCAAGGCAGGTGTGAGTGCCAGG...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGAGGCTCTGCGGAGGCTaGGGGAGCGGTGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRRLCGG*GSGVCS
Trigger: GGAGCACACACCGCTCCCGCAGCCTCCGCAGAGCCT...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAACATCCAGCAGGCAGATaGGGCCCAGGCCGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKHPAGR*GPGRRL
Trigger: GAGCCTACGGCCTGGGCCGCATCTGCCTGCTGGATG...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGACATCCAGCAGGCAGATaGGGCCCAGGCCGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGHPAGR*GPGRRL
Trigger: GAGCCTACGGCCTGGGCCGCATCTGCCTGCTGGATG...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCTGCTGTCCTGCTCAGTaGTCCTGGAGACGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSCCPAQ*SWRRGG
Trigger: CCCGCCGCGTCTCCAGGAGCACTGAGCAGGACAGCA...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGAACCGGGGGCCACGGTaGAGGTTGCAGTGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKNRGPR*RLQWSH
Trigger: ATGGGACCACTGCAACCTGCACCGTGGCCCCCGGTT...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGAACCGGGGGCCACGGTaGAGGTTGCAGTGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKNRGPR*RLQWSH
Trigger: ATGGGACCACTGCAACCTGCACCGTGGCCCCCGGTT...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTTTGGATGCTCTCATCTaGCGCCGGCGTCCCACACGG +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGLDALI*RRRPTR
Trigger: CCGTGTGGGACGCCGGCGGCAGATGAGAGCATCCAA...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCCTTCAGAGCAGGACTaGGGTGTGACCGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGPSEQD*GVTEEP
Trigger: CGGCTCCTCGGTCACACCCCAGTCCTGCTCTGAAGG...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR CCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCTCATCCATGGTCACATaGTCCCACAGGGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRASSMVT*SHRASA
Trigger: CGCAGAAGCCCTGTGGGACCATGTGACCATGGATGA...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCGAGGCTTCCAGAACCTaGATGACATCCCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAEASRT*MTSPAL
Trigger: CAAAGCCGGGGATGTCATCCAGGTTCTGGAAGCCTC...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAAGGCAGGCGCCCGGGTaGTTGTTGCAGTACTCGGAA +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPRQAPG*LLQYSE
Trigger: TTCCGAGTACTGCAACAACCACCCGGGCGCCTGCCT...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGATGGGGTGCAGGCCCTaGTGCGGTGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEEMGCRP*CGGATG
Trigger: CCCTGTGGCCCCACCGCACCAGGGCCTGCACCCCAT...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTTGTGGCGCTGGTGGATaGGGTGCAGGCCCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSCGAGG*GAGPGA
Trigger: CGCACCAGGGCCTGCACCCCATCCACCAGCGCCACA...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGGTGATGTGGCGCTGGTaGATGGGGTGCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKVMWRW*MGCRPW
Trigger: CCAGGGCCTGCACCCCATCCACCAGCGCCACATCAC...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAATAGTGATGTGGCGCTaGTGGATGGGGTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRIVMWR*WMGCRP
Trigger: GGGCCTGCACCCCATCCACCAGCGCCACATCACTAT...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAATAGTGATGTGGCGCTaGTGGATGGGGTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPIVMWR*WMGCRP
Trigger: GGGCCTGCACCCCATCCACCAGCGCCACATCACTAT...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTGTGGGCATAGTGATGTaGCGCTGGTGGATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAVGIVM*RWWMGC
Trigger: GCACCCCATCCACCAGCGCCACATCACTATGCCCAC...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGTGCCAGGGAACACCGTaGTCAGCCCCACGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKCQGTP*SAPRQL
Trigger: CAGCTGCCGTGGGGCTGACCACGGTGTTCCCTGGCA...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCTGCCAGGGAACACCGTaGTCAGCCCCACGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGICQGTP*SAPRQL
Trigger: CAGCTGCCGTGGGGCTGACCACGGTGTTCCCTGGCA...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCACTCTCGGAGGAGCCTaGGATCCAGTGCGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGITLGGA*DPVRAL
Trigger: GAGGGCGCGCACTGGATCCCAGGCTCCTCCGAGAGT...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382095.8
ENST00000382108.8
CDS-3UTR CCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCACCAGGAATGCCGTCCTaGCACTCACACCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASPGMPS*HSHLPC
Trigger: GCAAGGCAGGTGTGAGTGCCAGGACGGCATTCCTGG...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTGAGCCCCTGCTTGCCTaGGCTCCTGGGACAGCGCCA +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSEPLLA*APGTAP
Trigger: TGGCGCTGTCCCAGGAGCCCAGGCAAGCAGGGGCTC...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTGGTGTCGCATGGTTCTaGGGCGCATCCAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGGVAWF*GASSRQ
Trigger: CTGCCTGCTGGATGCGCCCCAGAACCATGCGACACC...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGGGCTTGGGTGTGGTaGGCCTTAGAGGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQEGAWVW*ALEGWE
Trigger: CTCCCACCCCTCTAAGGCCCACCACACCCAAGCCCC...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTACACGGTCTTCCTTCTaGGGGTCTGCAGCAACCGAG +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPTRSSF*GSAATE
Trigger: CTCGGTTGCTGCAGACCCCCAGAAGGAAGACCGTGT...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAGAAGTCATGCTTGCCTaGGGGTCCTCGTCCACACGG +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPEVMLA*GSSSTR
Trigger: CCGTGTGGACGAGGACCCCCAGGCAAGCATGACTTC...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCATTCTCCGGGCTCCTTTaGGGCAGCCCACTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPFSGLL*GSPLEH
Trigger: ATGCTCCAGTGGGCTGCCCCAAAGGAGCCCGGAGAA...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACACCTATCACGGAAATaGGGCGCCTTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPHLSRK*GAFSGL
Trigger: GAGCCCGGAGAAGGCGCCCCATTTCCGTGATAGGTG...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATACAGGCATGGGCGGCCTaGAAGCCGGTTGGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIQAWAA*KPVGSE
Trigger: TTCTGACCCAACCGGCTTCCAGGCCGCCCATGCCTG...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAACCTGGTGAGCAGGCATaGGCGGCCTGGAAGCCGGTT +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILEPGEQA*AAWKPV
Trigger: AACCGGCTTCCAGGCCGCCCATGCCTGCTCACCAGG...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTCTAGCTGCGCAACGGTaGACATTCCTGTGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPLAAQR*TFLCAC
Trigger: GCAAGCACACAGGAATGTTCACCGTTGCGCAGCTAG...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGACTTGCCCTGCTTCATaGGGTTGGCGAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKTCPAS*GWRAPG
Trigger: GCCTGGAGCTCGCCAACCTCATGAAGCAGGGCAAGT...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCACCTGTGTGGTATACTTaGGCAGCTCGGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASPVWYT*AARPAA
Trigger: TGCAGCTGGCCGAGCTGCTCAAGTATACCACACAGG...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR TCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCAGGCATTTTTCACGCTaGGGTTGCAGTCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCRHFSR*GCSPCR
Trigger: GCGACAAGGACTGCAACCTCAGCGTGAAAAATGCCT...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR TCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGTCTGCTCGGAGTTACTaGAGGCGTGCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKSARSY*RRAGRR
Trigger: CCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGA...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGACAGCCATGGGGCACCTaGACCCTTAGCAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGQPWGT*TLSSAA
Trigger: GGCAGCACTGCTAAGGGTTCAGGTGCCCCATGGCTG...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAACGTGCCGAGCGGCATaGTGGTCCACAGAAGCAACT +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRTCRAA*WSTEAT
Trigger: AGTTGCTTCTGTGGACCATCATGCCGCTCGGCACGT...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTTGCTCTGGGAGAATGTaGAGGGCCGGAACCGGGCCG +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSCSGRM*RAGTGP
Trigger: CGGCCCGGTTCCGGCCCTTCACATTCTCCCAGAGCA...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATATGCTCTGGGAGAATGTaGAGGGCCGGAACCGGGCCG +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLICSGRM*RAGTGP
Trigger: CGGCCCGGTTCCGGCCCTTCACATTCTCCCAGAGCA...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAAGCATCACAGAGGACTaGACAGGCTGGCAGCTACGG +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPSITED*TGWQLR
Trigger: CCGTAGCTGCCAGCCTGTGCAGTCCTCTGTGATGCT...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR GCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTTCATTGATGGCCAGCTaGTCCCCGCCGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSSLMAS*SPPGCR
Trigger: CCTGCAGCCCGGCGGGGAGCAGCTGGCCATCAATGA...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTCCCACAGGGCTTCTaGGCAGACCACGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKVPQGF*ADHVAI
Trigger: GATGGCAACGTGGTCTGCGCAGAAGCCCTGTGGGAC...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCACCTCACTGGGGGTGCTaGTGGAGTTTTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASPHWGC*WSFPTA
Trigger: AGCTGTCGGAAAACTCCAGCAGCACCCCCAGTGAGG...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAGCTCCTCACTGGGGGTaGTGCTGGAGTTTTCCGACA +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPAPHWG*CWSFPT
Trigger: TGTCGGAAAACTCCAGCAGCACCCCCAGTGAGGAGC...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCTGGCCTCCTCGTCCTaGTCCTCACTGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSLASSS*SSLGVL
Trigger: CAGCACCCCCAGTGAGGAGCAGGACGAGGAGGCCAG...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTCGCCCGGGTGGTTGTTaGAGTACTCGGAATAGATGG +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPRPGGC*STRNRW
Trigger: CCATCTATTCCGAGTACTGCAACAACCACCCGGGCG...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTGTCTGTACTTGCCCTaGTTCATGAGGTTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPCLYLP*FMRLAS
Trigger: GCTCGCCAACCTCATGAAGCAGGGCAAGTACAGACA...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTAGCCTGTTGAAGGTGTaGCAGAAGAGCGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPSLLKV*QKSEDF
Trigger: GAAGTCCTCGCTCTTCTGGCACACCTTCAACAGGCT...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACGGATTTCTCCCTCCTTaGCTGAAAAGCAGTGGATTC +
Preference number: 4 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHGFLPP*LKSSGF
Trigger: GAATCCACTGCTTTTCAGGCAAGGAGGGAGAAATCC...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTGAGTTACTGAAGGCGTaGAGGCAGGAGGGAATCCGA +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPELLKA*RQEGIR
Trigger: TCGGATTCCCTCCTGCCTGCACGCCTTCAGTAACTC...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGTTTCAGGTCCGAGCCTaGACAGGGGGCTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEEFQVRA*TGGCGA
Trigger: GGCCCCGCAGCCCCCTGTGCAGGCTCGGACCTGAAA...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAACCTCTGTGGTACCCGTaGGTCATGGGCCGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILEPLWYP*VMGRPE
Trigger: CTCAGGACGGCCCATGACGCACGGGTACCACAGAGG...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCAGTCAGTGGAGGAACTaGTCAGGGTCCTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCSQWRN*SGSSVV
Trigger: TACCACAGAGGACCCTGAGCAGTTCCTCCACTGACT...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAATGCAGCCGGCTGTGTaGCTGAAGTCTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIMQPAV*LKSQAG
Trigger: GCCAGCCTGAGACTTCAGGCACACAGCCGGCTGCAT...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCCCCGCCTGCTGTCCTaGTCAGTGCTCCTGGAGACG +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRPRLLS*SVLLET
Trigger: CGTCTCCAGGAGCACTGAGCAGGACAGCAGGCGGGG...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAGGCCACGGTGCAGGTTaGAGTGGTCCCATGCATGAC +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIGHGAG*SGPMHD
Trigger: GTCATGCATGGGACCACTGCAACCTGCACCGTGGCC...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCCTTGGGGGTTCTCTGTaGCTCTGTCCTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRALGGSL*LCPFLI
Trigger: GATGAGGAAAGGACAGAGGCACAGAGAACCCCCAAG...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGAGGACTGCACAGGCTaGCAGCTACGGGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKEDCTG*QLRELQ
Trigger: CTGCAGTTCCCGTAGCTGCCAGCCTGTGCAGTCCTC...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR CCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTTCATCCATGGTCACATaGTCCCACAGGGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPSSMVT*SHRASA
Trigger: CGCAGAAGCCCTGTGGGACCATGTGACCATGGATGA...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTACCACCAGTCCTTGTTaGAGGCTTCCAGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPTTSPC*RLPEPG
Trigger: TCCAGGTTCTGGAAGCCTCCAACAAGGACTGGTGGT...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCGTGATGTGGCGCTGGTaGATGGGGTGCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLVMWRW*MGCRPW
Trigger: CCAGGGCCTGCACCCCATCCACCAGCGCCACATCAC...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGATGTGGCGCTGGTaGATGGGGTGCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIVMWRW*MGCRPW
Trigger: CCAGGGCCTGCACCCCATCCACCAGCGCCACATCAC...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTGTGGGCATAGTGATGTaGCGCTGGTGGATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGVGIVM*RWWMGC
Trigger: GCACCCCATCCACCAGCGCCACATCACTATGCCCAC...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTCCAAAGACCTGCTGCTaGGGGACGCTTGTGGGCATA +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAPKTCC*GTLVGI
Trigger: TATGCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGG...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAGCGAGGACTTCCTCTTaGGTTCCGCCAGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRARTSS*VPPGQR
Trigger: TCTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGC...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCACTCGCTTTAGAGCATaGTACCGGGTCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRATRFRA*YRVPHL
Trigger: CAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTCATCATCAGCAGGGGTaGCTTCAGCTGCTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIHHQQG*LQLLPN
Trigger: ATTAGGCAGCAGCTGAAGCCACCCCTGCTGATGATG...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTCATCATCAGCAGGGGTaGCTTCAGCTGCTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPHHQQG*LQLLPN
Trigger: ATTAGGCAGCAGCTGAAGCCACCCCTGCTGATGATG...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAAGAACGGCTCTGGATGTaGGGGGCTGCAGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKERLWM*GAAGEK
Trigger: CTTCTCCCCTGCAGCCCCCCACATCCAGAGCCGTTC...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCGAACGGCTCTGGATGTaGGGGGCTGCAGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSERLWM*GAAGEK
Trigger: CTTCTCCCCTGCAGCCCCCCACATCCAGAGCCGTTC...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGAGAACGGCTCTGGATGTaGGGGGCTGCAGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGERLWM*GAAGEK
Trigger: CTTCTCCCCTGCAGCCCCCCACATCCAGAGCCGTTC...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTGCATGTGTGCCAAGGTaGCTCAGAATGGACATCAGG +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPACVPR*LRMDIR
Trigger: CCTGATGTCCATTCTGAGCCACCTTGGCACACATGC...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAGTCCGTGGAGGTAGGTaGGAGCCGGAAGTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVVRGGR*EPEVRA
Trigger: AGCCCTAACTTCCGGCTCCCACCTACCTCCACGGAC...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCCAGGAATGCCGTCCTaGCACTCACACCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGPGMPS*HSHLPC
Trigger: GCAAGGCAGGTGTGAGTGCCAGGACGGCATTCCTGG...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCGCACAAGCTTGGCTaGGCTGAGTTTGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASAHKLG*AEFGFL
Trigger: CAGGAAGCCAAACTCAGCCCAGCCAAGCTTGTGCGC...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGTGGGGCCGCTCGGGGTaGGCACCCGTCCTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKWGRSG*APVLFR
Trigger: TCGGAAGAGGACGGGTGCCCACCCCGAGCGGCCCCA...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAAGGTACCCGTGCGTCATaGGCCGTCCTGAGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKGTRAS*AVLRSA
Trigger: TGCAGACCTCAGGACGGCCCATGACGCACGGGTACC...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCGCTCAGGGTCCTCTGTaGTACCCGTGCGTCATGGGC +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGIAQGPL*YPCVMG
Trigger: GCCCATGACGCACGGGTACCACAGAGGACCCTGAGC...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGTCAGCGTCTAGGTaGGGCCCCTTAGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKVSASR*GPLEVA
Trigger: AGCCACCTCTAAGGGGCCCCACCTAGACGCTGACAC...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTCCCACTGGAGCATTCTaGTCTTCAGGGCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPPTGAF*SSGLAE
Trigger: TTCTGCCAGCCCTGAAGACCAGAATGCTCCAGTGGG...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCTTTGGGGCAGCCCACTaGAGCATTCTGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSFGAAH*SILVFR
Trigger: CCTGAAGACCAGAATGCTCCAGTGGGCTGCCCCAAA...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTACCTGTGTGGTATACTTaGGCAGCTCGGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVPVWYT*AARPAA
Trigger: TGCAGCTGGCCGAGCTGCTCAAGTATACCACACAGG...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCTCTGCTCGGAGTTACTaGAGGCGTGCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGISARSY*RRAGRR
Trigger: CCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGA...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAAGCAGTGCGGCTCTTTaGGAGTGCCTTCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASSSAAL*ECLLTS
Trigger: ACTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCT...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAGACCCCTCTCGGCTCTaGATTCCTTTCAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPDPSRL*IPFRTE
Trigger: CTCAGTCCTGAAAGGAATTCAGAGCCGAGAGGGGTC...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTCCCACTCTGCTGGCCTaGGGGCACCACATGCTGGTC +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVAPTLLA*GHHMLV
Trigger: GACCAGCATGTGGTGCCCTCAGGCCAGCAGAGTGGG...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAACGTCATGGGCCGTCCTaGGGTCTGCAAGATTGGAGG +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILERHGPS*GLQDWR
Trigger: CCTCCAATCTTGCAGACCTCAGGACGGCCCATGACG...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGGTCGGATATAGCCTCTaGCGAAGCTCGCGGGGAACC +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKVGYSL*RSSRGT
Trigger: GGTTCCCCGCGAGCTTCGTCAGAGGCTATATCCGAC...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409126.5
ENST00000434675.5
CDS-3UTR GCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGTCCCACAGGGCTTCTaGGCAGACCACGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQEVPQGF*ADHVAI
Trigger: GATGGCAACGTGGTCTGCGCAGAAGCCCTGTGGGAC...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTCTTCCTTATCTTCACTaGGGCCCCACCACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVALPYLH*GPTTSP
Trigger: AGGACTGGTGGTGGGGCCGCAGTGAAGATAAGGAAG...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAGCTCCTCACTGGGGGTaGTGCTGGAGTTTTCCGACA +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVAPHWG*CWSFPT
Trigger: TGTCGGAAAACTCCAGCAGCACCCCCAGTGAGGAGC...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCCTGGCCTCCTCGTCCTaGTCCTCACTGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLLASSS*SSLGVL
Trigger: CAGCACCCCCAGTGAGGAGCAGGACGAGGAGGCCAG...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTTGGTCCGCATCTGCTaGTTGTTCTCACAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPLVRIC*LFSQCL
Trigger: CAGACACTGTGAGAACAAGCAGCAGATGCGGACCAA...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCACATTCCTGTGTGCTTaGGGCACTGTCGGATATAGC +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRATFLCA*GTVGYS
Trigger: GCTATATCCGACAGTGCCGCAAGCACACAGGAATGT...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCACATTCCTGTGTGCTTaGGGCACTGTCGGATATAGC +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCTFLCA*GTVGYS
Trigger: GCTATATCCGACAGTGCCGCAAGCACACAGGAATGT...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTGTGAACATTCCTGTGTaGTTGCGGCACTGTCGGATA +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIVNIPV*LRHCRI
Trigger: TATCCGACAGTGCCGCAAGCACACAGGAATGTTCAC...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTATCATCTGCACAGGCCTaGAGCCACCTCGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVSSAQA*SHLALS
Trigger: AGACAAGGCGAGGTGGCTGCAGGCCTGTGCAGATGA...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATATCATCTGCACAGGCCTaGAGCCACCTCGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKISSAQA*SHLALS
Trigger: AGACAAGGCGAGGTGGCTGCAGGCCTGTGCAGATGA...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGGCCAAAGACCTGCTaGTGGGGGACGCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSRPKTC*WGTLVG
Trigger: GCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCT...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTGGTGGCTTCAGCTGCTaGCTAATCACTCGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPGGFSC*LITRFR
Trigger: TCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAGAGTTACTGAAGGCGTaGAGGCAGGAGGGAATCCGA +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRELLKA*RQEGIR
Trigger: TCGGATTCCCTCCTGCCTGCACGCCTTCAGTAACTC...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAACACACCCCCACACATaGCACAGGACCTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRTHPHT*HRTSPE
Trigger: TTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGT...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAACACACCCCCACACATaGCACAGGACCTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPTHPHT*HRTSPE
Trigger: TTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGT...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGTGTCCAACACGTCCCTaGCCTCAGAGCCACCTCCGG +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRCPTRP*PQSHLR
Trigger: CCGGAGGTGGCTCTGAGGGCAGGGACGTGTTGGACA...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382095.8
ENST00000382108.8
CDS-3UTR GCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGACTTTCCCAGGCCATaGTCCGAAGCCTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASDFPRP*SEASPF
Trigger: AAAGGGAGAGGCTTCGGAGCATGGCCTGGGAAAGTC...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGCAATGTGCCCCACTCTaGTGGCCTGAGGGCACCACA +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQEQCAPL*WPEGTT
Trigger: TGTGGTGCCCTCAGGCCAGCAGAGTGGGGCACATTG...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCTGCGGGAGCGGTGTGTaGTCCGCTGGAAGGCATCGT +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLCGSGV*SAGRHR
Trigger: ACGATGCCTTCCAGCGGAGCACACACCGCTCCCGCA...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCACCAGGCCGTAGGCTCTaGGGAGGCTGCGGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSPGRRL*GGCGSG
Trigger: ACCGCTCCCGCAGCCTCCGCAGAGCCTACGGCCTGG...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGGGCCACGGTGCAGGTTaGAGTGGTCCCATGCATGAC +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKGHGAG*SGPMHD
Trigger: GTCATGCATGGGACCACTGCAACCTGCACCGTGGCC...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTGTGAGGCCTACGCTTTaGCATCTGCACGGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGVRPTL*HLHGVA
Trigger: GGCAACACCGTGCAGATGGCAAAGCGTAGGCCTCAC...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS-3UTR CCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCGAGGACTGCACAGGCTaGCAGCTACGGGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGIEDCTG*QLRELQ
Trigger: CTGCAGTTCCCGTAGCTGCCAGCCTGTGCAGTCCTC...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000399949.6
CDS-3UTR CCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTGAGGCTTCCAGAACCTaGATGACATCCCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAEASRT*MTSPAL
Trigger: CAAAGCCGGGGATGTCATCCAGGTTCTGGAAGCCTC...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTACGTCCTGCTCCTCACTaGGGGTGCTGCTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVRPAPH*GCCWSF
Trigger: AAAACTCCAGCAGCACCCCCAGTGAGGAGCAGGACG...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGCGTCCTGCTCCTCACTaGGGGTGCTGCTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKRPAPH*GCCWSF
Trigger: AAAACTCCAGCAGCACCCCCAGTGAGGAGCAGGACG...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTTGTCTGTGGCGGCTCTaGCTGGCCTCCTCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVACLWRL*LASSSC
Trigger: GCAGGACGAGGAGGCCAGCCAGAGCCGCCACAGACA...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCTTCTCACAGTGTCTGTaGCGGCTCTGGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSFSQCL*RLWLAS
Trigger: GGAGGCCAGCCAGAGCCGCCACAGACACTGTGAGAA...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCAATGGGGTGCAGGCCCTaGTGCGGTGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSMGCRP*CGGATG
Trigger: CCCTGTGGCCCCACCGCACCAGGGCCTGCACCCCAT...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGGTGATGTGGCGCTGGTaGATGGGGTGCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEEVMWRW*MGCRPW
Trigger: CCAGGGCCTGCACCCCATCCACCAGCGCCACATCAC...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGATAGTGATGTGGCGCTaGTGGATGGGGTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKIVMWR*WMGCRP
Trigger: GGGCCTGCACCCCATCCACCAGCGCCACATCACTAT...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGCCAAAGACCTGCTGCTaGGGGACGCTTGTGGGCATA +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKPKTCC*GTLVGI
Trigger: TATGCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGG...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTCCTGGATGCTGTGTTTaGACCTGCAGCAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAPGCCV*TCSRHL
Trigger: CAAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGG...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCACCTGGATGCTGTGTTTaGACCTGCAGCAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASPGCCV*TCSRHL
Trigger: CAAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGG...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTAAGAAACCATGTGGCTaGTATCCCAGGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPKKPCG*YPREAP
Trigger: TGGAGCTTCCCTGGGATACCAGCCACATGGTTTCTT...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGATCCTGCGGCGCCTCTTaGCGGAGCCTACAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGSCGAS*RSLQSQ
Trigger: CTGACTTTGTAGGCTCCGCCAAGAGGCGCCGCAGGA...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382095.8
ENST00000382108.8
CDS-3UTR CCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCGGCCGTTTGGGGCAGTaGTCATGTTCTCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGIGRLGQ*SCSPGR
Trigger: CCTGCCTGGAGAACATGACCACTGCCCCAAACGGCC...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCTGAGTTTGGCTTCCTaGGTGTCCGTGTCGCCACCA +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGLSLAS*VSVSPP
Trigger: TGGTGGCGACACGGACACCCAGGAAGCCAAACTCAG...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTACTGAGTTTGGCTTCCTaGGTGTCCGTGTCGCCACCA +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVLSLAS*VSVSPP
Trigger: TGGTGGCGACACGGACACCCAGGAAGCCAAACTCAG...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGACCGTCCTCTTCCGACTaGTGGAAAAGAGGCGCACAA +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRPSSSD*WKRGAQ
Trigger: TTGTGCGCCTCTTTTCCACCAGTCGGAAGAGGACGG...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGTGGGACAGCGCCATTTaGGATGGACTTTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKWDSAI*DGLSQA
Trigger: GGCCTGGGAAAGTCCATCCCAAATGGCGCTGTCCCA...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCATCGTGGGTGTCGCATaGTTCTGGGGCGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGIIVGVA*FWGASS
Trigger: GCTGGATGCGCCCCAGAACCATGCGACACCCACGAT...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCCACACGGCGGGCACCTaGCCAGTGGCTATCGTGGGT +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLHTAGT*PVAIVG
Trigger: ACCCACGATAGCCACTGGCCAGGTGCCCGCCGTGTG...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCCTGCTCAGTGCTCCTaGAGACGCGGCGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRPAQCS*RRGGSS
Trigger: ACTACTCCCGCCGCGTCTCCAGGAGCACTGAGCAGG...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCTCTGGGGCTTGGGTGTaGTGGGCCTTAGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLSGAWV*WALEGW
Trigger: CCACCCCTCTAAGGCCCACCACACCCAAGCCCCAGA...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCACCTCATCACCATGTGTaGCTTCCAGGGGATCCTGCA +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASPHHHV*LPGDPA
Trigger: TGCAGGATCCCCTGGAAGCCACACATGGTGATGAGG...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGGCCTGGAAGCCGGTTaGGTCAGAAGATTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASGLEAG*VRRLSS
Trigger: ACTGGACAATCTTCTGACCCAACCGGCTTCCAGGCC...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGCACGGTCCAACCCAATaGGGGTGCTCTGGGAGAATG +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKHGPTQ*GCSGRM
Trigger: CATTCTCCCAGAGCACCCCCATTGGGTTGGACCGTG...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGCTAGCTGCGCAACGGTaGACATTCCTGTGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKLAAQR*TFLCAC
Trigger: GCAAGCACACAGGAATGTTCACCGTTGCGCAGCTAG...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGCTAGCTGCGCAACGGTaGACATTCCTGTGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKLAAQR*TFLCAC
Trigger: GCAAGCACACAGGAATGTTCACCGTTGCGCAGCTAG...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGACTTGCCCTGCTTCATaGGGTTGGCGAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRTCPAS*GWRAPG
Trigger: GCCTGGAGCTCGCCAACCTCATGAAGCAGGGCAAGT...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCTCTTCTGCACTGGTGTaGGCAGGAACCCGTCGATGG +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGISSALV*AGTRRW
Trigger: CCATCGACGGGTTCCTGCTCACACCAGTGCAGAAGA...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCCCTGTGTGGTATACTTaGGCAGCTCGGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGIPVWYT*AARPAA
Trigger: TGCAGCTGGCCGAGCTGCTCAAGTATACCACACAGG...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTATGCGCTTGCGCTCGTTaGTCAGACAGGCCACATTCT +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVCACAR*SDRPHS
Trigger: AGAATGTGGCCTGTCTGATCAACGAGCGCAAGCGCA...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATATGCGCTTGCGCTCGTTaGTCAGACAGGCCACATTCT +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKICACAR*SDRPHS
Trigger: AGAATGTGGCCTGTCTGATCAACGAGCGCAAGCGCA...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAAGGCATTTTTCACGCTaGGGTTGCAGTCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASRHFSR*GCSPCR
Trigger: GCGACAAGGACTGCAACCTCAGCGTGAAAAATGCCT...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR TCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCTCTGCTCGGAGTTACTaGAGGCGTGCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLSARSY*RRAGRR
Trigger: CCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGA...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCACGTGCCGAGCGGCATaGTGGTCCACAGAAGCAACT +
Preference number: 4 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSTCRAA*WSTEAT
Trigger: AGTTGCTTCTGTGGACCATCATGCCGCTCGGCACGT...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCACGTGCCGAGCGGCATaGTGGTCCACAGAAGCAACT +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGITCRAA*WSTEAT
Trigger: AGTTGCTTCTGTGGACCATCATGCCGCTCGGCACGT...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCTCCAAGTGGAACACGTaGCTCAAATCAGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRASKWNT*LKSGRK
Trigger: CTTCCTTCCTGATTTGAGTCACGTGTTCCACTTGGA...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAGCGTTTGGTCCTTCCTaGCCCAAGCTTTTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVAFGPS*PKLLGV
Trigger: GACTCCCAAAAGCTTGGGTCAGGAAGGACCAAACGC...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGTCATTGATGGCCAGCTaGTCCCCGCCGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKSLMAS*SPPGCR
Trigger: CCTGCAGCCCGGCGGGGAGCAGCTGGCCATCAATGA...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTCCCACAGGGCTTCTaGGCAGACCACGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIVPQGF*ADHVAI
Trigger: GATGGCAACGTGGTCTGCGCAGAAGCCCTGTGGGAC...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCTTCCTTATCTTCACTaGGGCCCCACCACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGLPYLH*GPTTSP
Trigger: AGGACTGGTGGTGGGGCCGCAGTGAAGATAAGGAAG...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAAGTACAGCATGTCCCTaGGCAGCAGGTCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVSTACP*AAGPSC
Trigger: GCAAGAAGGACCTGCTGCGCAGGGACATGCTGTACT...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGTCATCTGCACAGGCCTaGAGCCACCTCGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKSSAQA*SHLALS
Trigger: AGACAAGGCGAGGTGGCTGCAGGCCTGTGCAGATGA...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCAGGCCAAAGACCTGCTaGTGGGGGACGCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLRPKTC*WGTLVG
Trigger: GCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCT...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGGCCAGGCCAAAGACCTaGTGCTGGGGGACGCTTGTG +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEEARPKT*CWGTLV
Trigger: CACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCTGGC...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAAGCCTGTTGAAGGTGTaGCAGAAGAGCGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASSLLKV*QKSEDF
Trigger: GAAGTCCTCGCTCTTCTGGCACACCTTCAACAGGCT...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAAGGGGTGGCTTCAGCTaGTGCCTAATCACTCGCTTT +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRRGGFS*CLITRF
Trigger: AAAGCGAGTGATTAGGCAGCAGCTGAAGCCACCCCT...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAAGGGGTGGCTTCAGCTaGTGCCTAATCACTCGCTTT +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPRGGFS*CLITRF
Trigger: AAAGCGAGTGATTAGGCAGCAGCTGAAGCCACCCCT...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGCCTGCAGCAGGCACTTaGTCATCATCAGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKPAAGT*SSSAGV
Trigger: CACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGG...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCATGCTGTGTTTGGACCTaGAGCAGGCACTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASCCVWT*SRHLLI
Trigger: GATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCA...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTGCTGTGTTTGGACCTaGAGCAGGCACTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVACCVWT*SRHLLI
Trigger: GATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCA...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTTGTGGACACAGACGATaGCAGGGAACACCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGCGHRR*QGTPWS
Trigger: TGACCACGGTGTTCCCTGGCATCGTCTGTGTCCACA...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTCTCTCCACTTTGCTTaGAGGAAGAGGAACCTTGCA +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPSLHFA*RKRNLA
Trigger: TGCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGA...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAGAGTTACTGAAGGCGTaGAGGCAGGAGGGAATCCGA +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIELLKA*RQEGIR
Trigger: TCGGATTCCCTCCTGCCTGCACGCCTTCAGTAACTC...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATACGATGTCAGGAGCAGTaGGGCTCTTTGAGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIRCQEQ*GSLRVP
Trigger: AGGCACTCTCAAAGAGCCGCACTGCTCCTGACATCG...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCTCCAAGAAGCAGGACTaGTTTGGCTGTCTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCSKKQD*FGCLCD
Trigger: GTCACAAAGACAGCCAAAGCAGTCCTGCTTCTTGGA...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGACCAGAAGCTCCTTCCTaGAGCAACTTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRPEAPS*SNFCLR
Trigger: CCTGAGACAGAAGTTGCTGCAGGAAGGAGCTTCTGG...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACGACACCAAGTTGATCTaGATGAAGGAGTATCAGCAA +
Preference number: 4 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHDTKLI*MKEYQQ
Trigger: TTGCTGATACTCCTTCATGCAGATCAACTTGGTGTC...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAATGTCGCCACCAGGGCTaGAGCCACAGACTCCATTTC +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILECRHQG*SHRLHF
Trigger: GAAATGGAGTCTGTGGCTGCAGCCCTGGTGGCGACA...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTCCTCTGTGGTACCCGTaGGTCATGGGCCGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVAPLWYP*VMGRPE
Trigger: CTCAGGACGGCCCATGACGCACGGGTACCACAGAGG...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCAGTTGCAGTGGTCCCATaGATGACCGCCCCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSVAVVP*MTAPPR
Trigger: GCGGGGCGGGGCGGTCATGCATGGGACCACTGCAAC...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGTTCTTCTGGGCCGGCTaGCACACCAATGTTCACCAG +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKFFWAG*HTNVHQ
Trigger: CTGGTGAACATTGGTGTGGCAGCCGGCCCAGAAGAA...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTATTCCTTCTGGGGGTCTaGAGCAACCGAGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVFLLGV*SNRVFR
Trigger: CCTGAAGACTCGGTTGCTGCAGACCCCCAGAAGGAA...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGGCTGGCAGAAGTCATaGTTGCCTGGGGGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIGWQKS*LPGGPR
Trigger: ACGAGGACCCCCAGGCAAGCATGACTTCTGCCAGCC...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCATCAGGGACGACCTCCTaGGGCGCCTCTTGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEASGTTS*GASWRS
Trigger: GCTCCGCCAAGAGGCGCCGCAGGAGGTCGTCCCTGA...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382095.8
CDS-3UTR CCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAGAGGCTTCCAGAACCTaGATGACATCCCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVEASRT*MTSPAL
Trigger: CAAAGCCGGGGATGTCATCCAGGTTCTGGAAGCCTC...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGGAGGCTTCCAGAACCTaGATGACATCCCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKEASRT*MTSPAL
Trigger: CAAAGCCGGGGATGTCATCCAGGTTCTGGAAGCCTC...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAACCACCAGTCCTTGTTaGAGGCTTCCAGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASTTSPC*RLPEPG
Trigger: TCCAGGTTCTGGAAGCCTCCAACAAGGACTGGTGGT...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGACGTCCTGCTCCTCACTaGGGGTGCTGCTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGRPAPH*GCCWSF
Trigger: AAAACTCCAGCAGCACCCCCAGTGAGGAGCAGGACG...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTTTCTCACAGTGTCTGTaGCGGCTCTGGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSFSQCL*RLWLAS
Trigger: GGAGGCCAGCCAGAGCCGCCACAGACACTGTGAGAA...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGGCAGGCGCCCGGGTaGTTGTTGCAGTACTCGGAA +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSRQAPG*LLQYSE
Trigger: TTCCGAGTACTGCAACAACCACCCGGGCGCCTGCCT...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATATGGGGTGCAGGCCCTaGTGCGGTGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHMGCRP*CGGATG
Trigger: CCCTGTGGCCCCACCGCACCAGGGCCTGCACCCCAT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCATGTGGCGCTGGTGGATaGGGTGCAGGCCCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEACGAGG*GAGPGA
Trigger: CGCACCAGGGCCTGCACCCCATCCACCAGCGCCACA...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCGTGGGCATAGTGATGTaGCGCTGGTGGATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSVGIVM*RWWMGC
Trigger: GCACCCCATCCACCAGCGCCACATCACTATGCCCAC...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCGTGGGCATAGTGATGTaGCGCTGGTGGATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLVGIVM*RWWMGC
Trigger: GCACCCCATCCACCAGCGCCACATCACTATGCCCAC...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGACCAAAGACCTGCTGCTaGGGGACGCTTGTGGGCATA +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGPKTCC*GTLVGI
Trigger: TATGCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGG...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAACCAAAGACCTGCTGCTaGGGGACGCTTGTGGGCATA +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILEPKTCC*GTLVGI
Trigger: TATGCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGG...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGCCAAAGACCTGCTGCTaGGGGACGCTTGTGGGCATA +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQEPKTCC*GTLVGI
Trigger: TATGCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGG...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGCGAGGACTTCCTCTTaGGTTCCGCCAGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQEARTSS*VPPGQR
Trigger: TCTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGC...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATACCTGGATGCTGTGTTTaGACCTGCAGCAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIPGCCV*TCSRHL
Trigger: CAAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGG...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGTGCCAGGGAACACCGTaGTCAGCCCCACGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKCQGTP*SAPRQL
Trigger: CAGCTGCCGTGGGGCTGACCACGGTGTTCCCTGGCA...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCATGCTCACGTGACATaGTTATGCCCTGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCHAHVT*LCPVWL
Trigger: AAGCCAAACAGGGCATAACCATGTCACGTGAGCATG...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACAAGGTGGCTCAGAATaGACATCAGGCGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPQGGSE*TSGGHR
Trigger: TCTGTGACCGCCTGATGTCCATTCTGAGCCACCTTG...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCCGGCAGCCTGGGTCATaGCCACGGGCACTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVRQPGS*PRALPS
Trigger: ACTCGGCAGTGCCCGTGGCCATGACCCAGGCTGCCG...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGATCCTCTTCCGACTGGTaGAAAAGAGGCGCACAAGCT +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRSSSDW*KRGAQA
Trigger: AGCTTGTGCGCCTCTTTTCCACCAGTCGGAAGAGGA...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTGCTTGCCTGGGCTCCTaGGACAGCGCCATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSACLGS*DSAIWD
Trigger: ATCCCAAATGGCGCTGTCCCAGGAGCCCAGGCAAGC...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTTGTGCCCCACTCTGCTaGCCTGAGGGCACCACATGC +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVACAPLC*PEGTTC
Trigger: GCATGTGGTGCCCTCAGGCCAGCAGAGTGGGGCACA...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCATCGTGGGTGTCGCATaGTTCTGGGGCGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLIVGVA*FWGASS
Trigger: GCTGGATGCGCCCCAGAACCATGCGACACCCACGAT...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGACCTGACCCAAGCTTTTaGGAGTCAGTGGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRPDPSF*ESVEEL
Trigger: CAGTTCCTCCACTGACTCCCAAAAGCTTGGGTCAGG...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATATGGGCCTTAGAGGGGTaGGAGGCTGCTCAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIWALEG*EAAQGQ
Trigger: TTGACCCTGAGCAGCCTCCCACCCCTCTAAGGCCCA...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCCAAGGACACAGGCCCTaGCTCTCTCTGAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSQGHRP*LSLSRL
Trigger: GAGCCTGCTCAGAGAGAGCCAGGGCCTGTGTCCTTG...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGACTTCTCCTTTTCTTCTaGGCCGGCTGCCACACCAAT +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRLLLFF*AGCHTN
Trigger: ATTGGTGTGGCAGCCGGCCCAGAAGAAAAGGAGAAG...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCGAAGTCATGCTTGCCTaGGGGTCCTCGTCCACACGG +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSEVMLA*GSSSTR
Trigger: CCGTGTGGACGAGGACCCCCAGGCAAGCATGACTTC...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTTTCTCCGGGCTCCTTTaGGGCAGCCCACTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSFSGLL*GSPLEH
Trigger: ATGCTCCAGTGGGCTGCCCCAAAGGAGCCCGGAGAA...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTCACCTATCACGGAAATaGGGCGCCTTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSHLSRK*GAFSGL
Trigger: GAGCCCGGAGAAGGCGCCCCATTTCCGTGATAGGTG...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGGCCTGGAAGCCGGTTaGGTCAGAAGATTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKGLEAG*VRRLSS
Trigger: ACTGGACAATCTTCTGACCCAACCGGCTTCCAGGCC...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGCAGGCATGGGCGGCCTaGAAGCCGGTTGGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEEQAWAA*KPVGSE
Trigger: TTCTGACCCAACCGGCTTCCAGGCCGCCCATGCCTG...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTCCAATGGGGGTGCTCTaGGAGAATGTGAAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSPMGVL*ENVKGR
Trigger: CCGGCCCTTCACATTCTCCCAGAGCACCCCCATTGG...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGCATCGGGCTCCTGGGTaGCCACGGGCGAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKHRAPG*PRASFC
Trigger: GCAGAAACTCGCCCGTGGCCACCCAGGAGCCCGATG...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS-3UTR TCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGCTAGCTGCGCAACGGTaGACATTCCTGTGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQELAAQR*TFLCAC
Trigger: GCAAGCACACAGGAATGTTCACCGTTGCGCAGCTAG...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGCTAGCTGCGCAACGGTaGACATTCCTGTGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKLAAQR*TFLCAC
Trigger: GCAAGCACACAGGAATGTTCACCGTTGCGCAGCTAG...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCTCTTCTGCACTGGTGTaGGCAGGAACCCGTCGATGG +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLSSALV*AGTRRW
Trigger: CCATCGACGGGTTCCTGCTCACACCAGTGCAGAAGA...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGTGCGCTTGCGCTCGTTaGTCAGACAGGCCACATTCT +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQECACAR*SDRPHS
Trigger: AGAATGTGGCCTGTCTGATCAACGAGCGCAAGCGCA...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAAGGCATTTTTCACGCTaGGGTTGCAGTCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVRHFSR*GCSPCR
Trigger: GCGACAAGGACTGCAACCTCAGCGTGAAAAATGCCT...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGAGCAGTGCGGCTCTTTaGGAGTGCCTTCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKSSAAL*ECLLTS
Trigger: ACTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCT...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTTCCAAGGGTTCACCTaGGGACCAAGGTTATGTTTT +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPFQGFT*GPRLCF
Trigger: AAAACATAACCTTGGTCCTCAGGTGAACCCTTGGAA...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCACGTGCCGAGCGGCATaGTGGTCCACAGAAGCAACT +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSTCRAA*WSTEAT
Trigger: AGTTGCTTCTGTGGACCATCATGCCGCTCGGCACGT...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGTGCTTTGACGTTGTATaGGTTCCCGGCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQECFDVV*VPGQSL
Trigger: CAGGCTCTGGCCGGGAACGCATACAACGTCAAAGCA...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000399949.6
CDS-3UTR GCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTGGCAGCTACGGGAACTaGAGAAATCGCTTATTCACT +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPGSYGN*RNRLFT
Trigger: AGTGAATAAGCGATTTCTGCAGTTCCCGTAGCTGCC...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000399949.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGATGCTCCCCGCCGGGCTaGAGGTACCGAGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRCSPPG*RYRGLA
Trigger: GGCCAGCCCTCGGTACCTGCAGCCCGGCGGGGAGCA...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGACTTCCTTATCTTCACTaGGGCCCCACCACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGLPYLH*GPTTSP
Trigger: AGGACTGGTGGTGGGGCCGCAGTGAAGATAAGGAAG...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAACTTCCTTATCTTCACTaGGGCCCCACCACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKLPYLH*GPTTSP
Trigger: AGGACTGGTGGTGGGGCCGCAGTGAAGATAAGGAAG...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGCTTCCTTATCTTCACTaGGGCCCCACCACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKLPYLH*GPTTSP
Trigger: AGGACTGGTGGTGGGGCCGCAGTGAAGATAAGGAAG...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATACCTCACTGGGGGTGCTaGTGGAGTTTTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIPHWGC*WSFPTA
Trigger: AGCTGTCGGAAAACTCCAGCAGCACCCCCAGTGAGG...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTAAAATAGTGGCTAGCTaGGCAACGGTGAACATTCCT +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPKIVAS*ATVNIP
Trigger: AGGAATGTTCACCGTTGCGCAGCTAGCCACTATTTT...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTTGTCTGTACTTGCCCTaGTTCATGAGGTTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGCLYLP*FMRLAS
Trigger: GCTCGCCAACCTCATGAAGCAGGGCAAGTACAGACA...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCCCCACGATAGACACCTaGCAGCGAGCTATCTTGTCG +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGIPTIDT*QRAILS
Trigger: CGACAAGATAGCTCGCTGGCAGGTGTCTATCGTGGG...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGAAGTACAGCATGTCCCTaGGCAGCAGGTCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGSTACP*AAGPSC
Trigger: GCAAGAAGGACCTGCTGCGCAGGGACATGCTGTACT...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGAGTACAGCATGTCCCTaGGCAGCAGGTCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKSTACP*AAGPSC
Trigger: GCAAGAAGGACCTGCTGCGCAGGGACATGCTGTACT...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCTCATCTGCACAGGCCTaGAGCCACCTCGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSSSAQA*SHLALS
Trigger: AGACAAGGCGAGGTGGCTGCAGGCCTGTGCAGATGA...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTTCATCTGCACAGGCCTaGAGCCACCTCGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSSSAQA*SHLALS
Trigger: AGACAAGGCGAGGTGGCTGCAGGCCTGTGCAGATGA...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAATCTCCTTGTCCTCTTaGACCCGCCTCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASISLSS*TRLLSS
Trigger: AGATGAAAGGAGGCGGGTGCAAGAGGACAAGGAGAT...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGAGCCTGTTGAAGGTGTaGCAGAAGAGCGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKSLLKV*QKSEDF
Trigger: GAAGTCCTCGCTCTTCTGGCACACCTTCAACAGGCT...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAGGTGGCTTCAGCTGCTaGCTAATCACTCGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRGGFSC*LITRFR
Trigger: TCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAAGAGTTACTGAAGGCGTaGAGGCAGGAGGGAATCCGA +
Preference number: 4 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKELLKA*RQEGIR
Trigger: TCGGATTCCCTCCTGCCTGCACGCCTTCAGTAACTC...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCAGGCATGCGCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCRHAPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGCGCATGCCT...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAACGATGTCAGGAGCAGTaGGGCTCTTTGAGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILERCQEQ*GSLRVP
Trigger: AGGCACTCTCAAAGAGCCGCACTGCTCCTGACATCG...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCCGATGTCAGGAGCAGTaGGGCTCTTTGAGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSRCQEQ*GSLRVP
Trigger: AGGCACTCTCAAAGAGCCGCACTGCTCCTGACATCG...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGCGATGTCAGGAGCAGTaGGGCTCTTTGAGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQERCQEQ*GSLRVP
Trigger: AGGCACTCTCAAAGAGCCGCACTGCTCCTGACATCG...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGAGGTGCCACACACCTaGAGACTGAAGAATACACCT +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASEVPHT*RLKNTP
Trigger: AGGTGTATTCTTCAGTCTGCAGGTGTGTGGCACCTC...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGACACACCCCCACACATaGCACAGGACCTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKTHPHT*HRTSPE
Trigger: TTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGT...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACTTCCACCTGATAAAATaGTGGTTCAGCTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHFHLIK*WFSWLL
Trigger: TAAAAGCCAGCTGAACCAGCATTTTATCAGGTGGAA...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCTTGGGGGTTCTCTGTaGCTCTGTCCTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGLGGSL*LCPFLI
Trigger: GATGAGGAAAGGACAGAGGCACAGAGAACCCCCAAG...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGATCATCCATGGTCACATaGTCCCACAGGGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGSSMVT*SHRASA
Trigger: CGCAGAAGCCCTGTGGGACCATGTGACCATGGATGA...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCTCATCCATGGTCACATaGTCCCACAGGGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGISSMVT*SHRASA
Trigger: CGCAGAAGCCCTGTGGGACCATGTGACCATGGATGA...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGACCACCAGTCCTTGTTaGAGGCTTCCAGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKTTSPC*RLPEPG
Trigger: TCCAGGTTCTGGAAGCCTCCAACAAGGACTGGTGGT...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAACCACCAGTCCTTGTTaGAGGCTTCCAGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVTTSPC*RLPEPG
Trigger: TCCAGGTTCTGGAAGCCTCCAACAAGGACTGGTGGT...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCGTCCTGCTCCTCACTaGGGGTGCTGCTGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLRPAPH*GCCWSF
Trigger: AAAACTCCAGCAGCACCCCCAGTGAGGAGCAGGACG...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCAGGCCACATTCTTCATaGCCTCATATGCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRARPHSS*PHMLPL
Trigger: TAAAGGCAGCATATGAGGCCATGAAGAATGTGGCCT...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTAGGCCACATTCTTCATaGCCTCATATGCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIRPHSS*PHMLPL
Trigger: TAAAGGCAGCATATGAGGCCATGAAGAATGTGGCCT...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAAAGAACGTCCGCTGCTaGCTTTTGCCTTGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPKNVRC*LLPCLV
Trigger: CACTAAGCAAGGCAAAAGCCAGCAGCGGACGTTCTT...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGCAGGACACCAGCTGGTaGTCAAACAGGAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKQDTSW*SNRKNV
Trigger: GACGTTCTTCCTGTTTGACCACCAGCTGGTGTCCTG...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCAGTGATGTGGCGCTGGTaGATGGGGTGCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSVMWRW*MGCRPW
Trigger: CCAGGGCCTGCACCCCATCCACCAGCGCCACATCAC...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTGTGGGCATAGTGATGTaGCGCTGGTGGATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVAVGIVM*RWWMGC
Trigger: GCACCCCATCCACCAGCGCCACATCACTATGCCCAC...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCCAAAGACCTGCTGCTaGGGGACGCTTGTGGGCATA +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRPKTCC*GTLVGI
Trigger: TATGCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGG...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACCCAAGAAACTTTCCCTaGATTGAAGCACACAAGAAA +
Preference number: 4 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHPRNFP*IEAHKK
Trigger: TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGG...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTCGCTTTAGAGCATaGTACCGGGTCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKTRFRA*YRVPHL
Trigger: CAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCATGCCAGGGAACACCGTaGTCAGCCCCACGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSCQGTP*SAPRQL
Trigger: CAGCTGCCGTGGGGCTGACCACGGTGTTCCCTGGCA...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGGGAGGTCACCATCTTaGCGTCTTTCAGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIGRSPS*RLSGPS
Trigger: GCTCGGACCTGAAAGACGCCAAGATGGTGACCTCCC...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCGCGCACAAGCTTGGCTaGGCTGAGTTTGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLAHKLG*AEFGFL
Trigger: CAGGAAGCCAAACTCAGCCCAGCCAAGCTTGTGCGC...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAAACCAGGACCATGGAGTaGGGCCGCTCGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKTRTME*GRSGWA
Trigger: TGCCCACCCCGAGCGGCCCCACTCCATGGTCCTGGT...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTGCTTGCCTGGGCTCCTaGGACAGCGCCATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVAACLGS*DSAIWD
Trigger: ATCCCAAATGGCGCTGTCCCAGGAGCCCAGGCAAGC...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGCGGTGTGTGCTCCGCTaGAAGGCATCGTCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKRCVLR*KASSVS
Trigger: GGACACGGACGATGCCTTCCAGCGGAGCACACACCG...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTGGGTCAAATGTCAACTaGCTGCCAGCGTTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGGSNVN*LPAFGS
Trigger: TGACCCAAACGCTGGCAGCCAGTTGACATTTGACCC...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCACACGGTCTTCCTTCTaGGGGTCTGCAGCAACCGAG +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSTRSSF*GSAATE
Trigger: CTCGGTTGCTGCAGACCCCCAGAAGGAAGACCGTGT...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCGGCCTGGAAGCCGGTTaGGTCAGAAGATTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGIGLEAG*VRRLSS
Trigger: ACTGGACAATCTTCTGACCCAACCGGCTTCCAGGCC...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCACGGTCCAACCCAATaGGGGTGCTCTGGGAGAATG +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRHGPTQ*GCSGRM
Trigger: CATTCTCCCAGAGCACCCCCATTGGGTTGGACCGTG...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCACGGTCCAACCCAATaGGGGTGCTCTGGGAGAATG +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLHGPTQ*GCSGRM
Trigger: CATTCTCCCAGAGCACCCCCATTGGGTTGGACCGTG...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGACATCTGAAGAAACGTTaGATGCTCTCATCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRHLKKR*MLSSAA
Trigger: GGCGGCAGATGAGAGCATCCAACGTTTCTTCAGATG...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGCTTATTCACTGCTTTaGCGTTGTATGCGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKAYSLL*RCMRSR
Trigger: CCGGGAACGCATACAACGTCAAAGCAGTGAATAAGC...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000399949.6
CDS-3UTR TCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCTCTTCTGCACTGGTGTaGGCAGGAACCCGTCGATGG +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLSSALV*AGTRRW
Trigger: CCATCGACGGGTTCCTGCTCACACCAGTGCAGAAGA...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATATGCGCTTGCGCTCGTTaGTCAGACAGGCCACATTCT +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLICACAR*SDRPHS
Trigger: AGAATGTGGCCTGTCTGATCAACGAGCGCAAGCGCA...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCGATAAAGGCAGCTTCTaGTTTCCAAGAAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSDKGSF*FPRSRT
Trigger: AGTCCTGCTTCTTGGAAATCAGAAGCTGCCTTTATC...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCATCCAAGTGGAACACGTaGCTCAAATCAGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPSKWNT*LKSGRK
Trigger: CTTCCTTCCTGATTTGAGTCACGTGTTCCACTTGGA...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCTATGCTGTTCTATTCTaGCTGGGACACCAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAYAVLF*LGHQVD
Trigger: ATCAACTTGGTGTCCCAGTCAGAATAGAACAGCATA...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTCATTGCTCACAAGTTTaGAGACTCTGTCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIHCSQV*RLCQSP
Trigger: AGGACTTTGACAGAGTCTTCAAACTTGTGAGCAATG...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAATGGTCCCATACAAGCTaGCCCCACCTATCACGGAAA +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILEWSHTS*PHLSRK
Trigger: TTTCCGTGATAGGTGGGGTCAGCTTGTATGGGACCA...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCATCTGAAGAAACCAAGTaGAGGCTTTCCAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASSEETK*RLSRLQ
Trigger: CTGGAGTCTGGAAAGCCTTCACTTGGTTTCTTCAGA...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399949.6
ENST00000409126.5
CDS-3UTR GCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTCAGACTCCAGAATCTTaGTATCTCCCCTCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAQTPES*YLPSSY
Trigger: GTAGCTAGAGGGGAGATAGCAAGATTCTGGAGTCTG...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR GCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCACAGACTCCAGAATCTTaGTATCTCCCCTCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASQTPES*YLPSSY
Trigger: GTAGCTAGAGGGGAGATAGCAAGATTCTGGAGTCTG...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAATGCTCCCCGCCGGGCTaGAGGTACCGAGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKCSPPG*RYRGLA
Trigger: GGCCAGCCCTCGGTACCTGCAGCCCGGCGGGGAGCA...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGTTGGTCCGCATCTGCTaGTTGTTCTCACAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKLVRIC*LFSQCL
Trigger: CAGACACTGTGAGAACAAGCAGCAGATGCGGACCAA...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTACATTCCTGTGTGCTTaGGGCACTGTCGGATATAGC +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGTFLCA*GTVGYS
Trigger: GCTATATCCGACAGTGCCGCAAGCACACAGGAATGT...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAGTGAACATTCCTGTGTaGTTGCGGCACTGTCGGATA +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIVNIPV*LRHCRI
Trigger: TATCCGACAGTGCCGCAAGCACACAGGAATGTTCAC...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCGCCCGGGTGGTTGTTaGAGTACTCGGAATAGATGG +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSRPGGC*STRNRW
Trigger: CCATCTATTCCGAGTACTGCAACAACCACCCGGGCG...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCGCCCGGGTGGTTGTTaGAGTACTCGGAATAGATGG +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLRPGGC*STRNRW
Trigger: CCATCTATTCCGAGTACTGCAACAACCACCCGGGCG...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCCGCCCGGGTGGTTGTTaGAGTACTCGGAATAGATGG +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSRPGGC*STRNRW
Trigger: CCATCTATTCCGAGTACTGCAACAACCACCCGGGCG...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGTGTCTGTACTTGCCCTaGTTCATGAGGTTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQECLYLP*FMRLAS
Trigger: GCTCGCCAACCTCATGAAGCAGGGCAAGTACAGACA...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTATGCTGCCTTTATGTTaGTGTAATCACCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIMLPLC*CNHRVP
Trigger: AGGAACACGGTGATTACAGCAACATAAAGGCAGCAT...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGAGAGCTATCTTGTCGATaGTCTCCAGCTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGELSCR*SPACAC
Trigger: GCAAGCGCAAGCTGGAGAGCATCGACAAGATAGCTC...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATACCCACGATAGACACCTaGCAGCGAGCTATCTTGTCG +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIPTIDT*QRAILS
Trigger: CGACAAGATAGCTCGCTGGCAGGTGTCTATCGTGGG...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCCACGATAGACACCTaGCAGCGAGCTATCTTGTCG +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSPTIDT*QRAILS
Trigger: CGACAAGATAGCTCGCTGGCAGGTGTCTATCGTGGG...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGAGGAAGAACGTCCGCTaGTGGCTTTTGCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKRKNVR*WLLPCL
Trigger: TAAGCAAGGCAAAAGCCAGCAGCGGACGTTCTTCCT...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTAGGAAGAACGTCCGCTaGTGGCTTTTGCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGRKNVR*WLLPCL
Trigger: TAAGCAAGGCAAAAGCCAGCAGCGGACGTTCTTCCT...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGATCTCCTTGTCCTCTTaGACCCGCCTCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKISLSS*TRLLSS
Trigger: AGATGAAAGGAGGCGGGTGCAAGAGGACAAGGAGAT...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAGGTGGCTTCAGCTGCTaGCTAATCACTCGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIGGFSC*LITRFR
Trigger: TCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGTGCTGTGTTTGGACCTaGAGCAGGCACTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKCCVWT*SRHLLI
Trigger: GATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCA...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTATCACTCCTTAGGAACTaGAAAGCCCTGGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVSLLRN*KALDAV
Trigger: CACAGCATCCAGGGCTTTGCAGTTCCTAAGGAGTGA...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCTGTGGACACAGACGATaGCAGGGAACACCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLCGHRR*QGTPWS
Trigger: TGACCACGGTGTTCCCTGGCATCGTCTGTGTCCACA...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGATCTCTCCACTTTGCTTaGAGGAAGAGGAACCTTGCA +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRSLHFA*RKRNLA
Trigger: TGCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGA...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAGGATTTCTCCCTCCTTaGCTGAAAAGCAGTGGATTC +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRGFLPP*LKSSGF
Trigger: GAATCCACTGCTTTTCAGGCAAGGAGGGAGAAATCC...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTAGGCATGCGCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPRHAPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGCGCATGCCT...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGCCAGAAGCTCCTTCCTaGAGCAACTTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQEPEAPS*SNFCLR
Trigger: CCTGAGACAGAAGTTGCTGCAGGAAGGAGCTTCTGG...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTACACACCCCCACACATaGCACAGGACCTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSTHPHT*HRTSPE
Trigger: TTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGT...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAACCAGCATACTACTGCTaGCCTCTTTCTAGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKPAYYC*PLSSPQ
Trigger: CTGCGGACTAGAAAGAGGGCAGCAGTAGTATGCTGG...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAGCTCCAGCATACTACTaGTGCCCTCTTTCTAGTCCG +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILEAPAYY*CPLSSP
Trigger: CGGACTAGAAAGAGGGCAGCAGTAGTATGCTGGAGC...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAGAGCCACCTCCGGTaGCGGCGGAGCCCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKQSHLR*RRSPEV
Trigger: GACCTCGGGGCTCCGCCGGCACCGGAGGTGGCTCTG...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382095.8
ENST00000382108.8
CDS-3UTR GCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCCTTCATCTCCAGGAATaGCGTCCTGGCACTCACACC +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSLHLQE*RPGTHT
Trigger: GGTGTGAGTGCCAGGACGGCATTCCTGGAGATGAAG...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGTTCTCCAGGCAGGGTaGCCAGGGCCGCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRVLQAG*PGPHGS
Trigger: GCTGCCGTGCGGCCCTGGGCACCCTGCCTGGAGAAC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTGATTGTCCGTGCTCTTaGTCCTCCTGTAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSDCPCS*SSCSPC
Trigger: GCATGGGCTACAGGAGGAGCAAGAGCACGGACAATC...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGGCCGTCCTGAGGTCTaGAAGATTGGAGGTGGACTT +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIGRPEV*KIGGGL
Trigger: AAGTCCACCTCCAATCTTGCAGACCTCAGGACGGCC...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCGGCTTGGCAAAGAGCTaGAAGTGCAGGAACTGTCGC +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSGLAKS*KCRNCR
Trigger: GCGACAGTTCCTGCACTTGCAGCTCTTTGCCAAGCC...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAACAAATGTCAACTGGCTaGCAGCGTTTGGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILEQMSTG*QRLGHR
Trigger: CCTGTGACCCAAACGCTGGCAGCCAGTTGACATTTG...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAAGAGGGGTGGGAGGCTaGTCAGGGTCAAATGTCAAC +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIRGVGG*SGSNVN
Trigger: GTTGACATTTGACCCTGAGCAGCCTCCCACCCCTCT...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGTCATCCATGGTCACATaGTCCCACAGGGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRSSMVT*SHRASA
Trigger: CGCAGAAGCCCTGTGGGACCATGTGACCATGGATGA...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAACCACCAGTCCTTGTTaGAGGCTTCCAGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILETTSPC*RLPEPG
Trigger: TCCAGGTTCTGGAAGCCTCCAACAAGGACTGGTGGT...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGAGGCAGGCGCCCGGGTaGTTGTTGCAGTACTCGGAA +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKRQAPG*LLQYSE
Trigger: TTCCGAGTACTGCAACAACCACCCGGGCGCCTGCCT...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGAAGAACGTCCGCTGCTaGCTTTTGCCTTGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKKNVRC*LLPCLV
Trigger: CACTAAGCAAGGCAAAAGCCAGCAGCGGACGTTCTT...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAAAGAACGTCCGCTGCTaGCTTTTGCCTTGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVKNVRC*LLPCLV
Trigger: CACTAAGCAAGGCAAAAGCCAGCAGCGGACGTTCTT...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGCAGGACACCAGCTGGTaGTCAAACAGGAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQEQDTSW*SNRKNV
Trigger: GACGTTCTTCCTGTTTGACCACCAGCTGGTGTCCTG...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAACTCGCTTTAGAGCATaGTACCGGGTCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILETRFRA*YRVPHL
Trigger: CAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAACATCATCAGCAGGGGTaGCTTCAGCTGCTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKHHQQG*LQLLPN
Trigger: ATTAGGCAGCAGCTGAAGCCACCCCTGCTGATGATG...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGCATCATCAGCAGGGGTaGCTTCAGCTGCTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKHHQQG*LQLLPN
Trigger: ATTAGGCAGCAGCTGAAGCCACCCCTGCTGATGATG...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCTGGATGCTGTGTTTaGACCTGCAGCAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSPGCCV*TCSRHL
Trigger: CAAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGG...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCCCTGGATGCTGTGTTTaGACCTGCAGCAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSPGCCV*TCSRHL
Trigger: CAAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGG...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTCATGCTCACGTGACATaGTTATGCCCTGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAHAHVT*LCPVWL
Trigger: AAGCCAAACAGGGCATAACCATGTCACGTGAGCATG...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAAGAAACCATGTGGCTaGTATCCCAGGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIKKPCG*YPREAP
Trigger: TGGAGCTTCCCTGGGATACCAGCCACATGGTTTCTT...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCCTGTTCTATTCTGACTaGGACACCAAGTTGATCTGC +
Preference number: 4 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSLFYSD*DTKLIC
Trigger: GCAGATCAACTTGGTGTCCCAGTCAGAATAGAACAG...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGTCCTGCGGCGCCTCTTaGCGGAGCCTACAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKSCGAS*RSLQSQ
Trigger: CTGACTTTGTAGGCTCCGCCAAGAGGCGCCGCAGGA...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382095.8
ENST00000382108.8
CDS-3UTR CCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAGCGCCATTTGGGATaGACTTTCCCAGGCCATGCT +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLQRHLG*TFPGHA
Trigger: AGCATGGCCTGGGAAAGTCCATCCCAAATGGCGCTG...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGTGGGACAGCGCCATTTaGGATGGACTTTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEEWDSAI*DGLSQA
Trigger: GGCCTGGGAAAGTCCATCCCAAATGGCGCTGTCCCA...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATCACACGGCGGGCACCTaGCCAGTGGCTATCGTGGGT +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHHTAGT*PVAIVG
Trigger: ACCCACGATAGCCACTGGCCAGGTGCCCGCCGTGTG...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTCTCTGTCAAAGTCCTTaGCCCTTATCGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSLCQSP*PLSGSS
Trigger: GGAGGAGCCCGATAAGGGCCAAGGACTTTGACAGAG...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACCGCCCAGGAACTTTTaGTTTCAAGAGGAAATACGG +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPPPRNF*FQEEIR
Trigger: CCGTATTTCCTCTTGAAACCAAAAGTTCCTGGGCGG...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAAGAATGGCCGAGGCCTTaGCCGTCTCCCAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKEWPRP*PSPRAP
Trigger: TGGGGCTCTGGGAGACGGCCAAGGCCTCGGCCATTC...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTCCCACTGGAGCATTCTaGTCTTCAGGGCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSPTGAF*SSGLAE
Trigger: TTCTGCCAGCCCTGAAGACCAGAATGCTCCAGTGGG...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGTTTGGGGCAGCCCACTaGAGCATTCTGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRFGAAH*SILVFR
Trigger: CCTGAAGACCAGAATGCTCCAGTGGGCTGCCCCAAA...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGCCAATGGGGGTGCTCTaGGAGAATGTGAAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKPMGVL*ENVKGR
Trigger: CCGGCCCTTCACATTCTCCCAGAGCACCCCCATTGG...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CAA 72 bp GTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTaGCAGAGCCTGCCTTCTCTAGACATAGTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: VQGTERVERAPL*QSLPSLDIVKS
Trigger: ACTTTTAACTATGTCTAGAGAAGGCAGGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTCCTATTTCACTTAAGTaGGGTTCCTCTTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIPISLK*GSSLLY
Trigger: GTACAACAAAGAGGAACCTCACTTAAGTGAAATAGG...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTCCTATTTCACTTAAGTaGGGTTCCTCTTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPPISLK*GSSLLY
Trigger: GTACAACAAAGAGGAACCTCACTTAAGTGAAATAGG...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGGCATTTTTCACGCTaGGGTTGCAGTCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSRHFSR*GCSPCR
Trigger: GCGACAAGGACTGCAACCTCAGCGTGAAAAATGCCT...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAAGGCATTTTTCACGCTaGGGTTGCAGTCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIRHFSR*GCSPCR
Trigger: GCGACAAGGACTGCAACCTCAGCGTGAAAAATGCCT...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTAAACTTTCCCTGGATTaGAGCACACAAGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPKLSLD*STQETK
Trigger: CTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTT...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCAAACTTTCCCTGGATTaGAGCACACAAGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCKLSLD*STQETK
Trigger: CTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTT...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR TCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTCCTTCTCTCCTTCATTaGTCCCTAAAAGGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIPSLLH*SLKGSF
Trigger: AAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGG...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATACATGTGGGCAAGATGTaGTTTCTGCTCGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIHVGKM*FLLGVT
Trigger: AGTAACTCCGAGCAGAAATCACATCTTGCCCACATG...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTTTGAGAGTGCCTTCTaGCCAGTGCATTTTCATATT +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPFESAF*PVHFHI
Trigger: AATATGAAAATGCACTGGTCAGAAGGCACTCTCAAA...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAGATAAAGGCAGCTTCTaGTTTCCAAGAAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRDKGSF*FPRSRT
Trigger: AGTCCTGCTTCTTGGAAATCAGAAGCTGCCTTTATC...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAGATAAAGGCAGCTTCTaGTTTCCAAGAAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPDKGSF*FPRSRT
Trigger: AGTCCTGCTTCTTGGAAATCAGAAGCTGCCTTTATC...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAACAGCCATGGGGCACCTaGACCCTTAGCAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKQPWGT*TLSSAA
Trigger: GGCAGCACTGCTAAGGGTTCAGGTGCCCCATGGCTG...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCGAGCAAGATTCCCAATaGAATTCATACACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAEQDSQ*NSYTVH
Trigger: ATGGACAGTGTATGAATTTCATTGGGAATCTTGCTC...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAGTAGTTTCACCTAGTTaGCTTGGGTCCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRVVSPS*LGSSIS
Trigger: AGAAATGGAGGACCCAAGTCAACTAGGTGAAACTAC...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATAGCCGGCTGTGTGCCTaGAGTCTCAGGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHSRLCA*SLRLAS
Trigger: AGAGGCCAGCCTGAGACTTCAGGCACACAGCCGGCT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATATCCTTCACTTTCCTCTaGATTCGCGGACAGGGCACT +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLISFTFL*IRGQGT
Trigger: AGTGCCCTGTCCGCGAATTCAGAGGAAAGTGAAGGA...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTACTCAGTACCTCCATCTaGAGAAACGTTGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVLSTSI*RNVGCS
Trigger: AGAGCATCCAACGTTTCTTCAGATGGAGGTACTGAG...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCTCAGTACCTCCATCTaGAGAAACCAAGTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGLSTSI*RNQVKA
Trigger: AGCCTTCACTTGGTTTCTTCAGATGGAGGTACTGAG...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399949.6
ENST00000409126.5
CDS-3UTR GCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGGCTCCTCACTGGGGGTaGTGCTGGAGTTTTCCGACA +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKAPHWG*CWSFPT
Trigger: TGTCGGAAAACTCCAGCAGCACCCCCAGTGAGGAGC...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAAGTGAACATTCCTGTGTaGTTGCGGCACTGTCGGATA +
Preference number: 4 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKVNIPV*LRHCRI
Trigger: TATCCGACAGTGCCGCAAGCACACAGGAATGTTCAC...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAAAAATAGTGGCTAGCTaGGCAACGGTGAACATTCCT +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPKIVAS*ATVNIP
Trigger: AGGAATGTTCACCGTTGCGCAGCTAGCCACTATTTT...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTCGCCCGGGTGGTTGTTaGAGTACTCGGAATAGATGG +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVARPGGC*STRNRW
Trigger: CCATCTATTCCGAGTACTGCAACAACCACCCGGGCG...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCTGTCTGTACTTGCCCTaGTTCATGAGGTTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLCLYLP*FMRLAS
Trigger: GCTCGCCAACCTCATGAAGCAGGGCAAGTACAGACA...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTGAGCTATCTTGTCGATaGTCTCCAGCTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSELSCR*SPACAC
Trigger: GCAAGCGCAAGCTGGAGAGCATCGACAAGATAGCTC...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCATGCTGGCTTTTGCCTTaGTTAGTGATTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPCWLLP*LVILVS
Trigger: GCTGACCAAAATCACTAAGCAAGGCAAAAGCCAGCA...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTGCTGGCTTTTGCCTTaGTTAGTGATTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVACWLLP*LVILVS
Trigger: GCTGACCAAAATCACTAAGCAAGGCAAAAGCCAGCA...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCAGGAAGAACGTCCGCTaGTGGCTTTTGCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGIRKNVR*WLLPCL
Trigger: TAAGCAAGGCAAAAGCCAGCAGCGGACGTTCTTCCT...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGAGGAAGAACGTCCGCTaGTGGCTTTTGCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKRKNVR*WLLPCL
Trigger: TAAGCAAGGCAAAAGCCAGCAGCGGACGTTCTTCCT...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGCCAGGCCAAAGACCTaGTGCTGGGGGACGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHARPKT*CWGTLV
Trigger: CACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCTGGC...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTTGCTGTGTTTGGACCTaGAGCAGGCACTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSCCVWT*SRHLLI
Trigger: GATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCA...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGATCACTCCTTAGGAACTaGAAAGCCCTGGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGSLLRN*KALDAV
Trigger: CACAGCATCCAGGGCTTTGCAGTTCCTAAGGAGTGA...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTATCCAAGAAGCAGGACTaGTTTGGCTGTCTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVSKKQD*FGCLCD
Trigger: GTCACAAAGACAGCCAAAGCAGTCCTGCTTCTTGGA...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCCACGTGACATGGTTATaGCCTGTTTGGCTTTATATG +
Preference number: 4 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSHVTWL*PVWLYM
Trigger: CATATAAAGCCAAACAGGGCATAACCATGTCACGTG...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAAGGAGATGATTATCTaGAGGTGTCAGCCTAGGTGG +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIKEMII*RCQPRW
Trigger: CCACCTAGGCTGACACCTGCAGATAATCATCTCCTT...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCGCCTGTAAGCATGTGTaGCAAGGTGGCTCAGAATGG +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSACKHV*QGGSEW
Trigger: CCATTCTGAGCCACCTTGGCACACATGCTTACAGGC...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCCAGAAGCTCCTTCCTaGAGCAACTTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRPEAPS*SNFCLR
Trigger: CCTGAGACAGAAGTTGCTGCAGGAAGGAGCTTCTGG...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCACCTGGCACTCACACCTaGCTTGCACATCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSPGTHT*LAHRAP
Trigger: AGGAGCCCGATGTGCAAGGCAGGTGTGAGTGCCAGG...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCACAATGTGCCCCACTCTaGTGGCCTGAGGGCACCACA +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEAQCAPL*WPEGTT
Trigger: TGTGGTGCCCTCAGGCCAGCAGAGTGGGGCACATTG...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATATCCTCCTGTAGCCCATaGTGTTGTTTTCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLISSCSP*CCFQGP
Trigger: GGGACCCTGAAAACAACAGCATGGGCTACAGGAGGA...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCTCCTCCTGTAGCCCATaGTGTTGTTTTCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSSSCSP*CCFQGP
Trigger: GGGACCCTGAAAACAACAGCATGGGCTACAGGAGGA...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGGCAAGATTGTCCGTaGTCTTGCTCCTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSRQDCP*SCSSCS
Trigger: GCTACAGGAGGAGCAAGAGCACGGACAATCTTGCCT...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCACAGGGCACTGTGATTaGTGTGACAGCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLTGHCD*CDSWHF
Trigger: GAAGTGCCAGCTGTCACAGCAATCACAGTGCCCTGT...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCTTCCTTCTGGGGGTCTaGAGCAACCGAGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLFLLGV*SNRVFR
Trigger: CCTGAAGACTCGGTTGCTGCAGACCCCCAGAAGGAA...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAGGCTGGCAGAAGTCATaGTTGCCTGGGGGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEAGWQKS*LPGGPR
Trigger: ACGAGGACCCCCAGGCAAGCATGACTTCTGCCAGCC...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTACCACCAGTCCTTGTTaGAGGCTTCCAGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSTTSPC*RLPEPG
Trigger: TCCAGGTTCTGGAAGCCTCCAACAAGGACTGGTGGT...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAGGCAGGCGCCCGGGTaGTTGTTGCAGTACTCGGAA +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSRQAPG*LLQYSE
Trigger: TTCCGAGTACTGCAACAACCACCCGGGCGCCTGCCT...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTCAGGACACCAGCTGGTaGTCAAACAGGAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSQDTSW*SNRKNV
Trigger: GACGTTCTTCCTGTTTGACCACCAGCTGGTGTCCTG...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGATGTGGCGCTGGTGGATaGGGTGCAGGCCCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRCGAGG*GAGPGA
Trigger: CGCACCAGGGCCTGCACCCCATCCACCAGCGCCACA...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGGCGAGGACTTCCTCTTaGGTTCCGCCAGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKARTSS*VPPGQR
Trigger: TCTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGC...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCCAAGAAACTTTCCCTaGATTGAAGCACACAAGAAA +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCPRNFP*IEAHKK
Trigger: TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGG...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAACTCGCTTTAGAGCATaGTACCGGGTCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLITRFRA*YRVPHL
Trigger: CAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCATCATCAGCAGGGGTaGCTTCAGCTGCTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSHHQQG*LQLLPN
Trigger: ATTAGGCAGCAGCTGAAGCCACCCCTGCTGATGATG...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTACATGCTCACGTGACATaGTTATGCCCTGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVHAHVT*LCPVWL
Trigger: AAGCCAAACAGGGCATAACCATGTCACGTGAGCATG...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCGTCCGTGGAGGTAGGTaGGAGCCGGAAGTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSVRGGR*EPEVRA
Trigger: AGCCCTAACTTCCGGCTCCCACCTACCTCCACGGAC...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGAAAGAAACCATGTGGCTaGTATCCCAGGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGKKPCG*YPREAP
Trigger: TGGAGCTTCCCTGGGATACCAGCCACATGGTTTCTT...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCGCTTTTGGGAGTCAGTaGAGGAACTGCTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLAFGSQ*RNCSGS
Trigger: GGACCCTGAGCAGTTCCTCCACTGACTCCCAAAAGC...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAACCTGAAGTCTCAGGCTaGCCTCTCCAGGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKPEVSG*PLQGMG
Trigger: CCCCATCCCCTGGAGAGGCCAGCCTGAGACTTCAGG...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCCAAGGACACAGGCCCTaGCTCTCTCTGAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSQGHRP*LSLSRL
Trigger: GAGCCTGCTCAGAGAGAGCCAGGGCCTGTGTCCTTG...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCACCAATGGGGGTGCTCTaGGAGAATGTGAAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSPMGVL*ENVKGR
Trigger: CCGGCCCTTCACATTCTCCCAGAGCACCCCCATTGG...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGCACGGTCCAACCCAATaGGGGTGCTCTGGGAGAATG +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKHGPTQ*GCSGRM
Trigger: CATTCTCCCAGAGCACCCCCATTGGGTTGGACCGTG...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGCATCTGAAGAAACGTTaGATGCTCTCATCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKHLKKR*MLSSAA
Trigger: GGCGGCAGATGAGAGCATCCAACGTTTCTTCAGATG...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGGCTTATTCACTGCTTTaGCGTTGTATGCGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRAYSLL*RCMRSR
Trigger: CCGGGAACGCATACAACGTCAAAGCAGTGAATAAGC...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000399949.6
CDS-3UTR TCA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCCCTATTTCACTTAAGTaGGGTTCCTCTTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSPISLK*GSSLLY
Trigger: GTACAACAAAGAGGAACCTCACTTAAGTGAAATAGG...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATACTTGCCCTGCTTCATaGGGTTGGCGAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHTCPAS*GWRAPG
Trigger: GCCTGGAGCTCGCCAACCTCATGAAGCAGGGCAAGT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCACCTGTGTGGTATACTTaGGCAGCTCGGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEAPVWYT*AARPAA
Trigger: TGCAGCTGGCCGAGCTGCTCAAGTATACCACACAGG...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAATCTGCTCGGAGTTACTaGAGGCGTGCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKSARSY*RRAGRR
Trigger: CCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGA...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCCATGTGGGCAAGATGTaGTTTCTGCTCGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSHVGKM*FLLGVT
Trigger: AGTAACTCCGAGCAGAAATCACATCTTGCCCACATG...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGAGCAGTGCGGCTCTTTaGGAGTGCCTTCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKSSAAL*ECLLTS
Trigger: ACTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCT...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGTCCAAGTGGAACACGTaGCTCAAATCAGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKSKWNT*LKSGRK
Trigger: CTTCCTTCCTGATTTGAGTCACGTGTTCCACTTGGA...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTATGGCCTGTGAGCTGGTaGAAGGACATTTATTCATAC +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVWPVSW*KDIYSY
Trigger: GTATGAATAAATGTCCTTTCACCAGCTCACAGGCCA...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGGAGCTTGACAAGGTTTaGAGCTGGCCCTGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKELDKV*SWPCLS
Trigger: GCTGAGACAGGGCCAGCTTCAAACCTTGTCAAGCTC...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGATCATTGATGGCCAGCTaGTCCCCGCCGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRSLMAS*SPPGCR
Trigger: CCTGCAGCCCGGCGGGGAGCAGCTGGCCATCAATGA...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGTCCCACAGGGCTTCTaGGCAGACCACGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHVPQGF*ADHVAI
Trigger: GATGGCAACGTGGTCTGCGCAGAAGCCCTGTGGGAC...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACCTGGCCTCCTCGTCCTaGTCCTCACTGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHLASSS*SSLGVL
Trigger: CAGCACCCCCAGTGAGGAGCAGGACGAGGAGGCCAG...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGTTGGTCCGCATCTGCTaGTTGTTCTCACAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRLVRIC*LFSQCL
Trigger: CAGACACTGTGAGAACAAGCAGCAGATGCGGACCAA...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCACGTTGGTCCGCATCTaGTGCTTGTTCTCACAGTGT +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLTLVRI*CLFSQC
Trigger: ACACTGTGAGAACAAGCAGCAGATGCGGACCAACGT...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAACATTCCTGTGTGCTTaGGGCACTGTCGGATATAGC +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLITFLCA*GTVGYS
Trigger: GCTATATCCGACAGTGCCGCAAGCACACAGGAATGT...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTACATTCCTGTGTGCTTaGGGCACTGTCGGATATAGC +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSTFLCA*GTVGYS
Trigger: GCTATATCCGACAGTGCCGCAAGCACACAGGAATGT...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTGTGAACATTCCTGTGTaGTTGCGGCACTGTCGGATA +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSVNIPV*LRHCRI
Trigger: TATCCGACAGTGCCGCAAGCACACAGGAATGTTCAC...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCGTGAACATTCCTGTGTaGTTGCGGCACTGTCGGATA +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLVNIPV*LRHCRI
Trigger: TATCCGACAGTGCCGCAAGCACACAGGAATGTTCAC...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGAAAATAGTGGCTAGCTaGGCAACGGTGAACATTCCT +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKKIVAS*ATVNIP
Trigger: AGGAATGTTCACCGTTGCGCAGCTAGCCACTATTTT...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTTGTCTGTACTTGCCCTaGTTCATGAGGTTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVACLYLP*FMRLAS
Trigger: GCTCGCCAACCTCATGAAGCAGGGCAAGTACAGACA...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTCATGGCCTCATATGCTaGCTTTATGTTGCTGTAATC +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAHGLIC*LYVAVI
Trigger: GATTACAGCAACATAAAGGCAGCATATGAGGCCATG...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATGGCCTCATATGCTaGCTTTATGTTGCTGTAATC +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPHGLIC*LYVAVI
Trigger: GATTACAGCAACATAAAGGCAGCATATGAGGCCATG...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCACTTCATGGCCTCATATaGTGCCTTTATGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASLHGLI*CLYVAV
Trigger: TACAGCAACATAAAGGCAGCATATGAGGCCATGAAG...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATATGCTGGCTTTTGCCTTaGTTAGTGATTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKICWLLP*LVILVS
Trigger: GCTGACCAAAATCACTAAGCAAGGCAAAAGCCAGCA...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGGAAGAACGTCCGCTaGTGGCTTTTGCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSRKNVR*WLLPCL
Trigger: TAAGCAAGGCAAAAGCCAGCAGCGGACGTTCTTCCT...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCTCATCTGCACAGGCCTaGAGCCACCTCGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSSSAQA*SHLALS
Trigger: AGACAAGGCGAGGTGGCTGCAGGCCTGTGCAGATGA...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCATCTCCTTGTCCTCTTaGACCCGCCTCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLISLSS*TRLLSS
Trigger: AGATGAAAGGAGGCGGGTGCAAGAGGACAAGGAGAT...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCAGCCTGTTGAAGGTGTaGCAGAAGAGCGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLSLLKV*QKSEDF
Trigger: GAAGTCCTCGCTCTTCTGGCACACCTTCAACAGGCT...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGGTGGCTTCAGCTGCTaGCTAATCACTCGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIGGFSC*LITRFR
Trigger: TCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCAGGGGTGGCTTCAGCTaGTGCCTAATCACTCGCTTT +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLRGGFS*CLITRF
Trigger: AAAGCGAGTGATTAGGCAGCAGCTGAAGCCACCCCT...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTAGGGGTGGCTTCAGCTaGTGCCTAATCACTCGCTTT +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVARGGFS*CLITRF
Trigger: AAAGCGAGTGATTAGGCAGCAGCTGAAGCCACCCCT...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCACCTGCAGCAGGCACTTaGTCATCATCAGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEAPAAGT*SSSAGV
Trigger: CACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGG...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTTCACTCCTTAGGAACTaGAAAGCCCTGGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSSLLRN*KALDAV
Trigger: CACAGCATCCAGGGCTTTGCAGTTCCTAAGGAGTGA...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTACAGGAAGAGGAACCTTaGAGGATGACATTTGCACTA +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVQEEEP*RMTFAL
Trigger: TAGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTG...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGCAGGAAGAGGAACCTTaGAGGATGACATTTGCACTA +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKQEEEP*RMTFAL
Trigger: TAGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTG...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAGGATTTCTCCCTCCTTaGCTGAAAAGCAGTGGATTC +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILEGFLPP*LKSSGF
Trigger: GAATCCACTGCTTTTCAGGCAAGGAGGGAGAAATCC...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAATCCAAGAAGCAGGACTaGTTTGGCTGTCTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKSKKQD*FGCLCD
Trigger: GTCACAAAGACAGCCAAAGCAGTCCTGCTTCTTGGA...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAGAAGCCTGATGACATaGTCACGTGACATGGTTATG +
Preference number: 4 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIRSLMT*SRDMVM
Trigger: CATAACCATGTCACGTGAGCATGTCATCAGGCTTCT...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGAAGGAGATGATTATCTaGAGGTGTCAGCCTAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKKEMII*RCQPRW
Trigger: CCACCTAGGCTGACACCTGCAGATAATCATCTCCTT...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGAAGGAGATGATTATCTaGAGGTGTCAGCCTAGGTGG +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQEKEMII*RCQPRW
Trigger: CCACCTAGGCTGACACCTGCAGATAATCATCTCCTT...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGAGGTGCCACACACCTaGAGACTGAAGAATACACCT +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIEVPHT*RLKNTP
Trigger: AGGTGTATTCTTCAGTCTGCAGGTGTGTGGCACCTC...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCAGTCAGTGGAGGAACTaGTCAGGGTCCTCTGTGGTA +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLSQWRN*SGSSVV
Trigger: TACCACAGAGGACCCTGAGCAGTTCCTCCACTGACT...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAAATGCAGCCGGCTGTGTaGCTGAAGTCTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKMQPAV*LKSQAG
Trigger: GCCAGCCTGAGACTTCAGGCACACAGCCGGCTGCAT...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCATGCTGTCCTGCTCAGTaGTCCTGGAGACGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPCCPAQ*SWRRGG
Trigger: CCCGCCGCGTCTCCAGGAGCACTGAGCAGGACAGCA...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGAGGTCACAGGAGTCTTTaGTCAACACATCCTGGACAA +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGGHRSL*STHPGQ
Trigger: TTGTCCAGGATGTGTTGAGCAAAGACTCCTGTGACC...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAACAGCTGGCACTTCCTaGCCCGGGGCTCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKTAGTS*PGALGA
Trigger: AGCCCCCAGAGCCCCGGGGCAGGAAGTGCCAGCTGT...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTACAGGGCACTGTGATTaGTGTGACAGCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVATGHCD*CDSWHF
Trigger: GAAGTGCCAGCTGTCACAGCAATCACAGTGCCCTGT...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGCCAGAAGGTCCTTGCTaGCCTCATCACCATGTGTGG +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKPEGPC*PHHHVW
Trigger: CCACACATGGTGATGAGGGCAGCAAGGACCTTCTGG...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACTGTCTGTGGCGGCTCTaGCTGGCCTCCTCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNCLWRL*LASSSC
Trigger: GCAGGACGAGGAGGCCAGCCAGAGCCGCCACAGACA...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAAATAGTGATGTGGCGCTaGTGGATGGGGTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKIVMWR*WMGCRP
Trigger: GGGCCTGCACCCCATCCACCAGCGCCACATCACTAT...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATATAGTGATGTGGCGCTaGTGGATGGGGTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHIVMWR*WMGCRP
Trigger: GGGCCTGCACCCCATCCACCAGCGCCACATCACTAT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCATTAGGTTACAGCATGTaGGCAAGATGTGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASLGYSM*ARCDFC
Trigger: GCAGAAATCACATCTTGCCCACATGCTGTAACCTAA...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGATTAGGTTACAGCATGTaGGCAAGATGTGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRLGYSM*ARCDFC
Trigger: GCAGAAATCACATCTTGCCCACATGCTGTAACCTAA...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGCATGCTCACGTGACATaGTTATGCCCTGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKHAHVT*LCPVWL
Trigger: AAGCCAAACAGGGCATAACCATGTCACGTGAGCATG...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCCAAGGTGGCTCAGAATaGACATCAGGCGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLQGGSE*TSGGHR
Trigger: TCTGTGACCGCCTGATGTCCATTCTGAGCCACCTTG...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCTTGTACACTATACTTTaGCTGTCAACAGCAAATTCC +
Preference number: 4 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCLYTIL*LSTANS
Trigger: GGAATTTGCTGTTGACAGCCAAAGTATAGTGTACAA...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTTGTACACTATACTTTaGCTGTCAACAGCAAATTCC +
Preference number: 4 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPLYTIL*LSTANS
Trigger: GGAATTTGCTGTTGACAGCCAAAGTATAGTGTACAA...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAACGGCAGCCTGGGTCATaGCCACGGGCACTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKRQPGS*PRALPS
Trigger: ACTCGGCAGTGCCCGTGGCCATGACCCAGGCTGCCG...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCCGAGGGTGTTCCATGTaGAGGAGTTCCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVRGCSM*RSSPPG
Trigger: TCCTGGTGGGGAACTCCTCCACATGGAACACCCTCG...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACGGCCTCTCCAGGGGATaGGGCCCCACTCCTAGGACT +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNGLSRG*GPTPRT
Trigger: AGTCCTAGGAGTGGGGCCCCATCCCCTGGAGAGGCC...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCCCGCCCAGGAACTTTTaGTTTCAAGAGGAAATACGG +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGIPPRNF*FQEEIR
Trigger: CCGTATTTCCTCTTGAAACCAAAAGTTCCTGGGCGG...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGGGGTCAAATGTCAACTaGCTGCCAGCGTTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEEGSNVN*LPAFGS
Trigger: TGACCCAAACGCTGGCAGCCAGTTGACATTTGACCC...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGGGGCTTGGGTGTGGTaGGCCTTAGAGGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRGAWVW*ALEGWE
Trigger: CTCCCACCCCTCTAAGGCCCACCACACCCAAGCCCC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCACCTGGTGAGCAGGCATaGGCGGCCTGGAAGCCGGTT +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPPGEQA*AAWKPV
Trigger: AACCGGCTTCCAGGCCGCCCATGCCTGCTCACCAGG...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATCCAATGGGGGTGCTCTaGGAGAATGTGAAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHPMGVL*ENVKGR
Trigger: CCGGCCCTTCACATTCTCCCAGAGCACCCCCATTGG...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCCTAGCTGCGCAACGGTaGACATTCCTGTGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSLAAQR*TFLCAC
Trigger: GCAAGCACACAGGAATGTTCACCGTTGCGCAGCTAG...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATTCTTCTGCACTGGTGTaGGCAGGAACCCGTCGATGG +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHSSALV*AGTRRW
Trigger: CCATCGACGGGTTCCTGCTCACACCAGTGCAGAAGA...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCATGCGCTTGCGCTCGTTaGTCAGACAGGCCACATTCT +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEACACAR*SDRPHS
Trigger: AGAATGTGGCCTGTCTGATCAACGAGCGCAAGCGCA...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTCCTTCTCTCCTTCATTaGTCCCTAAAAGGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAPSLLH*SLKGSF
Trigger: AAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGG...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR TCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGACCTTCTCTCCTTCATTaGTCCCTAAAAGGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRPSLLH*SLKGSF
Trigger: AAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGG...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAAATCAAATGCAGAAGTaGTCCTCTAACCTCATCACT +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRNQMQK*SSNLIT
Trigger: AGTGATGAGGTTAGAGGATCACTTCTGCATTTGATT...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTAATCAAATGCAGAAGTaGTCCTCTAACCTCATCACT +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVANQMQK*SSNLIT
Trigger: AGTGATGAGGTTAGAGGATCACTTCTGCATTTGATT...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR TCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGAAAGCAGTGGATTCTTaGGGATGCGTAAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQEKAVDS*GCVSCS
Trigger: AGAGCAACTTACGCATCCTCAAGAATCCACTGCTTT...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGAAAAGCAGTGGATTCTTaGGGATGCGTAAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGKAVDS*GCVSCS
Trigger: AGAGCAACTTACGCATCCTCAAGAATCCACTGCTTT...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGAAAGCAGTGGATTCTTaGGGATGCGTAAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKKAVDS*GCVSCS
Trigger: AGAGCAACTTACGCATCCTCAAGAATCCACTGCTTT...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTGATGACATGCTCACGTaGCATGGTTATGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSDDMLT*HGYALF
Trigger: AAACAGGGCATAACCATGTCACGTGAGCATGTCATC...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGCAGCCATGGGGCACCTaGACCCTTAGCAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRQPWGT*TLSSAA
Trigger: GGCAGCACTGCTAAGGGTTCAGGTGCCCCATGGCTG...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGTCCAAGTGGAACACGTaGCTCAAATCAGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRSKWNT*LKSGRK
Trigger: CTTCCTTCCTGATTTGAGTCACGTGTTCCACTTGGA...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAGAGCAAGATTCCCAATaGAATTCATACACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPEQDSQ*NSYTVH
Trigger: ATGGACAGTGTATGAATTTCATTGGGAATCTTGCTC...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAATGGCCTGTGAGCTGGTaGAAGGACATTTATTCATAC +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILEWPVSW*KDIYSY
Trigger: GTATGAATAAATGTCCTTTCACCAGCTCACAGGCCA...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGATGGCCTGTGAGCTGGTaGAAGGACATTTATTCATAC +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGWPVSW*KDIYSY
Trigger: GTATGAATAAATGTCCTTTCACCAGCTCACAGGCCA...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGTCCATTTCTGGCCTGTaGGCTGGTGAAAGGACATTT +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRSISGL*AGERTF
Trigger: AAATGTCCTTTCACCAGCTCACAGGCCAGAAATGGA...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTTCCATTTCTGGCCTGTaGGCTGGTGAAAGGACATTT +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSSISGL*AGERTF
Trigger: AAATGTCCTTTCACCAGCTCACAGGCCAGAAATGGA...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCGTAGTTTCACCTAGTTaGCTTGGGTCCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSVVSPS*LGSSIS
Trigger: AGAAATGGAGGACCCAAGTCAACTAGGTGAAACTAC...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCGCGTTTGGTCCTTCCTaGCCCAAGCTTTTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVAFGPS*PKLLGV
Trigger: GACTCCCAAAAGCTTGGGTCAGGAAGGACCAAACGC...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAAGCCGGCTGTGTGCCTaGAGTCTCAGGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRSRLCA*SLRLAS
Trigger: AGAGGCCAGCCTGAGACTTCAGGCACACAGCCGGCT...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGTGGTCCCATACAAGCTaGCCCCACCTATCACGGAAA +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKWSHTS*PHLSRK
Trigger: TTTCCGTGATAGGTGGGGTCAGCTTGTATGGGACCA...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCTGCTCTGGGAGAATGTaGAGGGCCGGAACCGGGCCG +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFCSGRM*RAGTGP
Trigger: CGGCCCGGTTCCGGCCCTTCACATTCTCCCAGAGCA...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCTCAGTACCTCCATCTaGAGAAACGTTGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRLSTSI*RNVGCS
Trigger: AGAGCATCCAACGTTTCTTCAGATGGAGGTACTGAG...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATAGCATCACAGAGGACTaGACAGGCTGGCAGCTACGG +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHSITED*TGWQLR
Trigger: CCGTAGCTGCCAGCCTGTGCAGTCCTCTGTGATGCT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAATCATTGATGGCCAGCTaGTCCCCGCCGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKSLMAS*SPPGCR
Trigger: CCTGCAGCCCGGCGGGGAGCAGCTGGCCATCAATGA...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATCCTCACTGGGGGTGCTaGTGGAGTTTTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHPHWGC*WSFPTA
Trigger: AGCTGTCGGAAAACTCCAGCAGCACCCCCAGTGAGG...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAACCTCACTGGGGGTGCTaGTGGAGTTTTCCGACAGCT +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKPHWGC*WSFPTA
Trigger: AGCTGTCGGAAAACTCCAGCAGCACCCCCAGTGAGG...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACATTCCTGTGTGCTTaGGGCACTGTCGGATATAGC +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLTFLCA*GTVGYS
Trigger: GCTATATCCGACAGTGCCGCAAGCACACAGGAATGT...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCAAAATAGTGGCTAGCTaGGCAACGGTGAACATTCCT +
Preference number: 4 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSKIVAS*ATVNIP
Trigger: AGGAATGTTCACCGTTGCGCAGCTAGCCACTATTTT...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAAAAAATAGTGGCTAGCTaGGCAACGGTGAACATTCCT +
Preference number: 4 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKKIVAS*ATVNIP
Trigger: AGGAATGTTCACCGTTGCGCAGCTAGCCACTATTTT...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGATGCTGCCTTTATGTTaGTGTAATCACCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKMLPLC*CNHRVP
Trigger: AGGAACACGGTGATTACAGCAACATAAAGGCAGCAT...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTACATGGCCTCATATGCTaGCTTTATGTTGCTGTAATC +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVHGLIC*LYVAVI
Trigger: GATTACAGCAACATAAAGGCAGCATATGAGGCCATG...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGCATGGCCTCATATGCTaGCTTTATGTTGCTGTAATC +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKHGLIC*LYVAVI
Trigger: GATTACAGCAACATAAAGGCAGCATATGAGGCCATG...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCTTCATGGCCTCATATaGTGCCTTTATGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGLHGLI*CLYVAV
Trigger: TACAGCAACATAAAGGCAGCATATGAGGCCATGAAG...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCCCCACGATAGACACCTaGCAGCGAGCTATCTTGTCG +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSPTIDT*QRAILS
Trigger: CGACAAGATAGCTCGCTGGCAGGTGTCTATCGTGGG...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGTGCTGGCTTTTGCCTTaGTTAGTGATTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQECWLLP*LVILVS
Trigger: GCTGACCAAAATCACTAAGCAAGGCAAAAGCCAGCA...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGAGGAAGAACGTCCGCTaGTGGCTTTTGCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEERKNVR*WLLPCL
Trigger: TAAGCAAGGCAAAAGCCAGCAGCGGACGTTCTTCCT...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACGCCAGGCCAAAGACCTaGTGCTGGGGGACGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNARPKT*CWGTLV
Trigger: CACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCTGGC...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGTCACTCCTTAGGAACTaGAAAGCCCTGGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEESLLRN*KALDAV
Trigger: CACAGCATCCAGGGCTTTGCAGTTCCTAAGGAGTGA...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCCAGGAAGAGGAACCTTaGAGGATGACATTTGCACTA +
Preference number: 4 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSQEEEP*RMTFAL
Trigger: TAGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTG...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGCAGGAAGAGGAACCTTaGAGGATGACATTTGCACTA +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKQEEEP*RMTFAL
Trigger: TAGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTG...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCGGATTTCTCCCTCCTTaGCTGAAAAGCAGTGGATTC +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSGFLPP*LKSSGF
Trigger: GAATCCACTGCTTTTCAGGCAAGGAGGGAGAAATCC...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGGCTCCAGCATACTACTaGTGCCCTCTTTCTAGTCCG +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKAPAYY*CPLSSP
Trigger: CGGACTAGAAAGAGGGCAGCAGTAGTATGCTGGAGC...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTGAAATCCACTTTCATTaGATCCTGAAAACAATGAGA +
Preference number: 4 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIEIHFH*ILKTMR
Trigger: TCTCATTGTTTTCAGGATGCAATGAAAGTGGATTTC...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCGACTTTCCCAGGCCATaGTCCGAAGCCTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSDFPRP*SEASPF
Trigger: AAAGGGAGAGGCTTCGGAGCATGGCCTGGGAAAGTC...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCAGATTGTCCGTGCTCTTaGTCCTCCTGTAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSDCPCS*SSCSPC
Trigger: GCATGGGCTACAGGAGGAGCAAGAGCACGGACAATC...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGGGTCACAGGAGTCTTTaGTCAACACATCCTGGACAA +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRGHRSL*STHPGQ
Trigger: TTGTCCAGGATGTGTTGAGCAAAGACTCCTGTGACC...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCATTGGATGCTCTCATCTaGCGCCGGCGTCCCACACGG +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPLDALI*RRRPTR
Trigger: CCGTGTGGGACGCCGGCGGCAGATGAGAGCATCCAA...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGACCTTCAGAGCAGGACTaGGGTGTGACCGAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRPSEQD*GVTEEP
Trigger: CGGCTCCTCGGTCACACCCCAGTCCTGCTCTGAAGG...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR CCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTTACCATCCTTCTGTTTaGAAAACGGCAACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGYHPSV*KTATFR
Trigger: TCTGAAGGTTGCCGTTTTCCAAACAGAAGGATGGTA...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR CCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCGAGGCTTCCAGAACCTaGATGACATCCCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSEASRT*MTSPAL
Trigger: CAAAGCCGGGGATGTCATCCAGGTTCTGGAAGCCTC...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGAGGCCACATTCTTCATaGCCTCATATGCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKRPHSS*PHMLPL
Trigger: TAAAGGCAGCATATGAGGCCATGAAGAATGTGGCCT...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTCCAAGAAACTTTCCCTaGATTGAAGCACACAAGAAA +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAPRNFP*IEAHKK
Trigger: TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGG...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCACCTGGATGCTGTGTTTaGACCTGCAGCAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEAPGCCV*TCSRHL
Trigger: CAAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGG...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CCA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAATTATTAGTAGAGACTaGGCTTTGCCATATTGGCCA +
Preference number: 4 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASIISRD*ALPYWP
Trigger: TGGCCAATATGGCAAAGCCCAGTCTCTACTAATAAT...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCAAGAAACCATGTGGCTaGTATCCCAGGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLKKPCG*YPREAP
Trigger: TGGAGCTTCCCTGGGATACCAGCCACATGGTTTCTT...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCGGAGTATCAGCAATTTaGCTTGCAGAGATTTCCACC +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGIGVSAI*LAEIST
Trigger: GGTGGAAATCTCTGCAAGCCAAATTGCTGATACTCC...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAGGAGTATCAGCAATTTaGCTTGCAGAGATTTCCACC +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILEGVSAI*LAEIST
Trigger: GGTGGAAATCTCTGCAAGCCAAATTGCTGATACTCC...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGCTGTTCTATTCTGACTaGGACACCAAGTTGATCTGC +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKLFYSD*DTKLIC
Trigger: GCAGATCAACTTGGTGTCCCAGTCAGAATAGAACAG...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACAGGCCGCACGGCAGCCTaGGTCATGGCCACGGGCACT +
Preference number: 4 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTGRTAA*VMATGT
Trigger: AGTGCCCGTGGCCATGACCCAGGCTGCCGTGCGGCC...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACCGGTGTGTGCTCCGCTaGAAGGCATCGTCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNRCVLR*KASSVS
Trigger: GGACACGGACGATGCCTTCCAGCGGAGCACACACCG...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGGTACCCGTGCGTCATaGGCCGTCCTGAGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRGTRAS*AVLRSA
Trigger: TGCAGACCTCAGGACGGCCCATGACGCACGGGTACC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCACCTCATCACCATGTGTaGCTTCCAGGGGATCCTGCA +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSPHHHV*LPGDPA
Trigger: TGCAGGATCCCCTGGAAGCCACACATGGTGATGAGG...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCGAATGGCCGAGGCCTTaGCCGTCTCCCAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFEWPRP*PSPRAP
Trigger: TGGGGCTCTGGGAGACGGCCAAGGCCTCGGCCATTC...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGTCTGGTCTTCAGGGCTaGCAGAAGTCATGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKSGLQG*QKSCLP
Trigger: AGGCAAGCATGACTTCTGCCAGCCCTGAAGACCAGA...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACTGCACATCGGGCTCCTaGGTGGCCACGGGCGAGTTT +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNCTSGS*VATGEF
Trigger: AAACTCGCCCGTGGCCACCCAGGAGCCCGATGTGCA...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS-3UTR TCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCCTATTTCACTTAAGTaGGGTTCCTCTTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGPISLK*GSSLLY
Trigger: GTACAACAAAGAGGAACCTCACTTAAGTGAAATAGG...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAACTTGCCCTGCTTCATaGGGTTGGCGAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRTCPAS*GWRAPG
Trigger: GCCTGGAGCTCGCCAACCTCATGAAGCAGGGCAAGT...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACACTTGCCCTGCTTCATaGGGTTGGCGAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNTCPAS*GWRAPG
Trigger: GCCTGGAGCTCGCCAACCTCATGAAGCAGGGCAAGT...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCAAAGCAGTGGATTCTTaGGGATGCGTAAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLKAVDS*GCVSCS
Trigger: AGAGCAACTTACGCATCCTCAAGAATCCACTGCTTT...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCCATGTGGGCAAGATGTaGTTTCTGCTCGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLHVGKM*FLLGVT
Trigger: AGTAACTCCGAGCAGAAATCACATCTTGCCCACATG...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAATACACCTTTGTCTCTaGCATCACAGACTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRIHLCL*HHRLVY
Trigger: ATAAACAAGTCTGTGATGTCAGAGACAAAGGTGTAT...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTTTCCAAGGGTTCACCTaGGGACCAAGGTTATGTTTT +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSFQGFT*GPRLCF
Trigger: AAAACATAACCTTGGTCCTCAGGTGAACCCTTGGAA...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAAGATCTTTAATGGAGTaGCCCTCACACTCTATAAAA +
Preference number: 4 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRRSLME*PSHSIK
Trigger: TTTTATAGAGTGTGAGGGTCACTCCATTAAAGATCT...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAATTGGCAAATGGAAGATaGGAATACTTGAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILELANGR*EYLSLP
Trigger: TGGAAGGCTCAAGTATTCTCATCTTCCATTTGCCAA...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGAGTTTCTTCTCTCCCTaGCAAGTAATAGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKSFFSP*QVIVQK
Trigger: TTTCTGCACTATTACTTGTCAGGGAGAGAAGAAACT...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTTTCTTGACACTCCTTTaGGGGACAATTCTAAGTTTC +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGFLTLL*GTILSF
Trigger: GAAACTTAGAATTGTCCCTCAAAGGAGTGTCAAGAA...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGTCCATTTCTGGCCTGTaGGCTGGTGAAAGGACATTT +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEESISGL*AGERTF
Trigger: AAATGTCCTTTCACCAGCTCACAGGCCAGAAATGGA...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACGTCGGATATAGCCTCTaGCGAAGCTCGCGGGGAACC +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNVGYSL*RSSRGT
Trigger: GGTTCCCCGCGAGCTTCGTCAGAGGCTATATCCGAC...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409126.5
ENST00000434675.5
CDS-3UTR GCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGGTGAACATTCCTGTGTaGTTGCGGCACTGTCGGATA +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKVNIPV*LRHCRI
Trigger: TATCCGACAGTGCCGCAAGCACACAGGAATGTTCAC...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAACCCACGATAGACACCTaGCAGCGAGCTATCTTGTCG +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKPTIDT*QRAILS
Trigger: CGACAAGATAGCTCGCTGGCAGGTGTCTATCGTGGG...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTTGCTGGCTTTTGCCTTaGTTAGTGATTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSCWLLP*LVILVS
Trigger: GCTGACCAAAATCACTAAGCAAGGCAAAAGCCAGCA...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATAGTACAGCATGTCCCTaGGCAGCAGGTCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHSTACP*AAGPSC
Trigger: GCAAGAAGGACCTGCTGCGCAGGGACATGCTGTACT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAAGGCCAAAGACCTGCTaGTGGGGGACGCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKRPKTC*WGTLVG
Trigger: GCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCT...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAAGCCTGTTGAAGGTGTaGCAGAAGAGCGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEASLLKV*QKSEDF
Trigger: GAAGTCCTCGCTCTTCTGGCACACCTTCAACAGGCT...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAGGGGTGGCTTCAGCTaGTGCCTAATCACTCGCTTT +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSRGGFS*CLITRF
Trigger: AAAGCGAGTGATTAGGCAGCAGCTGAAGCCACCCCT...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGTCTCTCCACTTTGCTTaGAGGAAGAGGAACCTTGCA +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEESLHFA*RKRNLA
Trigger: TGCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGA...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCGGATTTCTCCCTCCTTaGCTGAAAAGCAGTGGATTC +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLGFLPP*LKSSGF
Trigger: GAATCCACTGCTTTTCAGGCAAGGAGGGAGAAATCC...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGGTGCCTTCTGACCAGTaGATTTTCATATTCACTGTA +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKVPSDQ*IFIFTV
Trigger: TACAGTGAATATGAAAATGCACTGGTCAGAAGGCAC...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTAGAAGCCTGATGACATaGTCACGTGACATGGTTATG +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSRSLMT*SRDMVM
Trigger: CATAACCATGTCACGTGAGCATGTCATCAGGCTTCT...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCGCCTGTAAGCATGTGTaGCAAGGTGGCTCAGAATGG +
Preference number: 4 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVACKHV*QGGSEW
Trigger: CCATTCTGAGCCACCTTGGCACACATGCTTACAGGC...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCACCAGAAGCTCCTTCCTaGAGCAACTTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSPEAPS*SNFCLR
Trigger: CCTGAGACAGAAGTTGCTGCAGGAAGGAGCTTCTGG...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACACATGGCCACGGGCACTaGCGAGTCCGCAGACCGCAG +
Preference number: 4 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTHGHGH*RVRRPQ
Trigger: CTGCGGTCTGCGGACTCGGCAGTGCCCGTGGCCATG...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAAGGCAAGATTGTCCGTaGTCTTGCTCCTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEARQDCP*SCSSCS
Trigger: GCTACAGGAGGAGCAAGAGCACGGACAATCTTGCCT...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCACAAATGTCAACTGGCTaGCAGCGTTTGGGTCACAGG +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEAQMSTG*QRLGHR
Trigger: CCTGTGACCCAAACGCTGGCAGCCAGTTGACATTTG...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGGCAGAAGTCATGCTTaGCTGGGGGTCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRGRSHA*LGVLVH
Trigger: GTGGACGAGGACCCCCAGGCAAGCATGACTTCTGCC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAATTGGATGCTCTCATCTaGCGCCGGCGTCCCACACGG +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKLDALI*RRRPTR
Trigger: CCGTGTGGGACGCCGGCGGCAGATGAGAGCATCCAA...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGTACCATCCTTCTGTTTaGAAAACGGCAACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKYHPSV*KTATFR
Trigger: TCTGAAGGTTGCCGTTTTCCAAACAGAAGGATGGTA...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR CCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGATTCTCACAGTGTCTGTaGCGGCTCTGGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRFSQCL*RLWLAS
Trigger: GGAGGCCAGCCAGAGCCGCCACAGACACTGTGAGAA...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGAGTACTCGGAATAGATaGCAAAGCCCTCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKSTRNR*QSPLDF
Trigger: AAAATCAAGAGGGCTTTGCCATCTATTCCGAGTACT...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACGTGGGCATAGTGATGTaGCGCTGGTGGATGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNVGIVM*RWWMGC
Trigger: GCACCCCATCCACCAGCGCCACATCACTATGCCCAC...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTACCAAGAAACTTTCCCTaGATTGAAGCACACAAGAAA +
Preference number: 4 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVPRNFP*IEAHKK
Trigger: TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGG...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTGGAAGTTTTTATCACTaGGTCCAAGAAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGGSFYH*VQETFP
Trigger: AGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCC...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAACTCGCTTTAGAGCATaGTACCGGGTCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEATRFRA*YRVPHL
Trigger: CAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAAGGTGTCAGCCTAGGTaGCCTTTGTTAATAAAGACT +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILERCQPR*PLLIKT
Trigger: AGTCTTTATTAACAAAGGCCACCTAGGCTGACACCT...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGAGGTGTCAGCCTAGGTaGCCTTTGTTAATAAAGACT +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKRCQPR*PLLIKT
Trigger: AGTCTTTATTAACAAAGGCCACCTAGGCTGACACCT...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCTGTTCTATTCTGACTaGGACACCAAGTTGATCTGC +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLLFYSD*DTKLIC
Trigger: GCAGATCAACTTGGTGTCCCAGTCAGAATAGAACAG...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCAACTCTCGGAGGAGCCTaGGATCCAGTGCGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LENKLGLATKCKPFLHYPTLGGA*DPVRAL
Trigger: GAGGGCGCGCACTGGATCCCAGGCTCCTCCGAGAGT...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382095.8
ENST00000382108.8
CDS-3UTR CCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCATGGCCCGAGGCCGTTTaGGGCAGTGGTCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPWPEAV*GSGHVL
Trigger: GAGAACATGACCACTGCCCCAAACGGCCTCGGGCCA...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCTCCTCTTCCGACTGGTaGAAAAGAGGCGCACAAGCT +
Preference number: 4 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVSSSDW*KRGAQA
Trigger: AGCTTGTGCGCCTCTTTTCCACCAGTCGGAAGAGGA...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCCTGGACAATCGGGCTTaGCAAAGAGCTGCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSLDNRA*QRAASA
Trigger: TGCACTTGCAGCTCTTTGCCAAGCCCGATTGTCCAG...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCCTGGACAATCGGGCTTaGCAAAGAGCTGCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVLDNRA*QRAASA
Trigger: TGCACTTGCAGCTCTTTGCCAAGCCCGATTGTCCAG...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACTGGGCCTTAGAGGGGTaGGAGGCTGCTCAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHWALEG*EAAQGQ
Trigger: TTGACCCTGAGCAGCCTCCCACCCCTCTAAGGCCCA...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAATCTGGGGCTTGGGTGTaGTGGGCCTTAGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKSGAWV*WALEGW
Trigger: CCACCCCTCTAAGGCCCACCACACCCAAGCCCCAGA...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCAGCCGTAGTCAGAGAATaGCCGAGGCCTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPAVVRE*PRPWPS
Trigger: AGACGGCCAAGGCCTCGGCCATTCTCTGACTACGGC...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGCCGTAGTCAGAGAATaGCCGAGGCCTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRAVVRE*PRPWPS
Trigger: AGACGGCCAAGGCCTCGGCCATTCTCTGACTACGGC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CAA 72 bp GTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTaGACGGCATCCTTGAAAATCAAATGCAGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VTRHVQHCVNPV*TASLKIKCRSD
Trigger: ATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR CAA 72 bp TCCAAGGGTTCACCTGAGGACCAAGGTTATGTTTTCTaGATGCATGATGTCACTCTCAGGAACGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SKGSPEDQGYVF*MHDVTLRNGSG
Trigger: TCCAGAGCCGTTCCTGAGAGTGACATCATGCATCAAGAAAACATAACCTTGGTCCTCAGGTGAACCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAACTTGCCCTGCTTCATaGGGTTGGCGAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKTCPAS*GWRAPG
Trigger: GCCTGGAGCTCGCCAACCTCATGAAGCAGGGCAAGT...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACTCTTCTGCACTGGTGTaGGCAGGAACCCGTCGATGG +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHSSALV*AGTRRW
Trigger: CCATCGACGGGTTCCTGCTCACACCAGTGCAGAAGA...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCAAACTTTCCCTGGATTaGAGCACACAAGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSKLSLD*STQETK
Trigger: CTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTT...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCCCTTCTCTCCTTCATTaGTCCCTAAAAGGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: ARCDFCSELLKACRQEGIPSLLH*SLKGSF
Trigger: AAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGG...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGTTTGAGAGTGCCTTCTaGCCAGTGCATTTTCATATT +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKFESAF*PVHFHI
Trigger: AATATGAAAATGCACTGGTCAGAAGGCACTCTCAAA...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTTTCCAAGGGTTCACCTaGGGACCAAGGTTATGTTTT +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVAFQGFT*GPRLCF
Trigger: AAAACATAACCTTGGTCCTCAGGTGAACCCTTGGAA...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCTTCCAAGGGTTCACCTaGGGACCAAGGTTATGTTTT +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLFQGFT*GPRLCF
Trigger: AAAACATAACCTTGGTCCTCAGGTGAACCCTTGGAA...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGTTGGCAAATGGAAGATaGGAATACTTGAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRLANGR*EYLSLP
Trigger: TGGAAGGCTCAAGTATTCTCATCTTCCATTTGCCAA...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGTATGCTGTTCTATTCTaGCTGGGACACCAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRYAVLF*LGHQVD
Trigger: ATCAACTTGGTGTCCCAGTCAGAATAGAACAGCATA...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAAGTTTCTTCTCTCCCTaGCAAGTAATAGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: CDQTRAALCQPRLDGILESFFSP*QVIVQK
Trigger: TTTCTGCACTATTACTTGTCAGGGAGAGAAGAAACT...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAGTCCCACAGGGCTTCTaGGCAGACCACGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKVPQGF*ADHVAI
Trigger: GATGGCAACGTGGTCTGCGCAGAAGCCCTGTGGGAC...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGCTCCTCACTGGGGGTaGTGCTGGAGTTTTCCGACA +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRAPHWG*CWSFPT
Trigger: TGTCGGAAAACTCCAGCAGCACCCCCAGTGAGGAGC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCATTGGTCCGCATCTGCTaGTTGTTCTCACAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEALVRIC*LFSQCL
Trigger: CAGACACTGTGAGAACAAGCAGCAGATGCGGACCAA...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCACGTTGGTCCGCATCTaGTGCTTGTTCTCACAGTGT +
Preference number: 4 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVTLVRI*CLFSQC
Trigger: ACACTGTGAGAACAAGCAGCAGATGCGGACCAACGT...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAACATTCCTGTGTGCTTaGGGCACTGTCGGATATAGC +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEATFLCA*GTVGYS
Trigger: GCTATATCCGACAGTGCCGCAAGCACACAGGAATGT...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGAGCTATCTTGTCGATaGTCTCCAGCTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHELSCR*SPACAC
Trigger: GCAAGCGCAAGCTGGAGAGCATCGACAAGATAGCTC...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCGGTGGCTTCAGCTGCTaGCTAATCACTCGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVGGFSC*LITRFR
Trigger: TCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGCCTGCAGCAGGCACTTaGTCATCATCAGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRPAAGT*SSSAGV
Trigger: CACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGG...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGACCTGCAGCAGGCACTTaGTCATCATCAGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRPAAGT*SSSAGV
Trigger: CACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGG...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTTCCTTGAAAATCAAATaGAGAAGTGATCCTCTAACC +
Preference number: 4 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGSLKIK*RSDPLT
Trigger: GGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGA...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGTCCTTGAAAATCAAATaGAGAAGTGATCCTCTAACC +
Preference number: 4 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKSLKIK*RSDPLT
Trigger: GGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGA...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCGATGAAGGTGACAGATaGATCTTCTTTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLDEGDR*IFFLST
Trigger: AGTGGAGAGAAAGAAGATGCATCTGTCACCTTCATC...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGAGGCATGCGCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEERHAPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGCGCATGCCT...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGTCCAAGAAGCAGGACTaGTTTGGCTGTCTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKSKKQD*FGCLCD
Trigger: GTCACAAAGACAGCCAAAGCAGTCCTGCTTCTTGGA...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATACACGTGACATGGTTATaGCCTGTTTGGCTTTATATG +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIHVTWL*PVWLYM
Trigger: CATATAAAGCCAAACAGGGCATAACCATGTCACGTG...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCCACGTGACATGGTTATaGCCTGTTTGGCTTTATATG +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSHVTWL*PVWLYM
Trigger: CATATAAAGCCAAACAGGGCATAACCATGTCACGTG...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAGAGGTGCCACACACCTaGAGACTGAAGAATACACCT +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEAEVPHT*RLKNTP
Trigger: AGGTGTATTCTTCAGTCTGCAGGTGTGTGGCACCTC...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAACCAGCATACTACTGCTaGCCTCTTTCTAGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKPAYYC*PLSSPQ
Trigger: CTGCGGACTAGAAAGAGGGCAGCAGTAGTATGCTGG...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGCTCCAGCATACTACTaGTGCCCTCTTTCTAGTCCG +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHAPAYY*CPLSSP
Trigger: CGGACTAGAAAGAGGGCAGCAGTAGTATGCTGGAGC...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGATTCCACCTGATAAAATaGTGGTTCAGCTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGFHLIK*WFSWLL
Trigger: TAAAAGCCAGCTGAACCAGCATTTTATCAGGTGGAA...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGGACACCAAGTTGATCTaGATGAAGGAGTATCAGCAA +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRDTKLI*MKEYQQ
Trigger: TTGCTGATACTCCTTCATGCAGATCAACTTGGTGTC...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTGAAATCCACTTTCATTaGATCCTGAAAACAATGAGA +
Preference number: 4 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAEIHFH*ILKTMR
Trigger: TCTCATTGTTTTCAGGATGCAATGAAAGTGGATTTC...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCATGTCCAACACGTCCCTaGCCTCAGAGCCACCTCCGG +
Preference number: 4 (lower is better)
Translates to: LENKLGLATKCKPFLHYPCPTRP*PQSHLR
Trigger: CCGGAGGTGGCTCTGAGGGCAGGGACGTGTTGGACA...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382095.8
ENST00000382108.8
CDS-3UTR GCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCATGCGGGAGCGGTGTGTaGTCCGCTGGAAGGCATCGT +
Preference number: 4 (lower is better)
Translates to: LENKLGLATKCKPFLHYPCGSGV*SAGRHR
Trigger: ACGATGCCTTCCAGCGGAGCACACACCGCTCCCGCA...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCGGCAGAAGTCATGCTTaGCTGGGGGTCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFGRSHA*LGVLVH
Trigger: GTGGACGAGGACCCCCAGGCAAGCATGACTTCTGCC...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGAGTACTCGGAATAGATaGCAAAGCCCTCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKSTRNR*QSPLDF
Trigger: AAAATCAAGAGGGCTTTGCCATCTATTCCGAGTACT...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAAGGCAGGCGCCCGGGTaGTTGTTGCAGTACTCGGAA +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKRQAPG*LLQYSE
Trigger: TTCCGAGTACTGCAACAACCACCCGGGCGCCTGCCT...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCAGGCCACATTCTTCATaGCCTCATATGCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLRPHSS*PHMLPL
Trigger: TAAAGGCAGCATATGAGGCCATGAAGAATGTGGCCT...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCAAAGAACGTCCGCTGCTaGCTTTTGCCTTGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSKNVRC*LLPCLV
Trigger: CACTAAGCAAGGCAAAAGCCAGCAGCGGACGTTCTT...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAACAGGACACCAGCTGGTaGTCAAACAGGAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKQDTSW*SNRKNV
Trigger: GACGTTCTTCCTGTTTGACCACCAGCTGGTGTCCTG...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGGCGAGGACTTCCTCTTaGGTTCCGCCAGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRARTSS*VPPGQR
Trigger: TCTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGC...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCAGCGAGGACTTCCTCTTaGGTTCCGCCAGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPARTSS*VPPGQR
Trigger: TCTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGC...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGCCAAGAAACTTTCCCTaGATTGAAGCACACAAGAAA +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKPRNFP*IEAHKK
Trigger: TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGG...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGGGAAGTTTTTATCACTaGGTCCAAGAAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKGSFYH*VQETFP
Trigger: AGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCC...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCTTAGGTTACAGCATGTaGGCAAGATGTGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLLGYSM*ARCDFC
Trigger: GCAGAAATCACATCTTGCCCACATGCTGTAACCTAA...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAAGGTGTCAGCCTAGGTaGCCTTTGTTAATAAAGACT +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIRCQPR*PLLIKT
Trigger: AGTCTTTATTAACAAAGGCCACCTAGGCTGACACCT...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAAGCATGTGTGCCAAGGTaGCTCAGAATGGACATCAGG +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKACVPR*LRMDIR
Trigger: CCTGATGTCCATTCTGAGCCACCTTGGCACACATGC...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCAACAGTCATGTAGGATaGGGGGATTTTCTGAATAAG +
Preference number: 4 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSNSHVG*GDFLNK
Trigger: CTTATTCAGAAAATCCCCCCATCCTACATGACTGTT...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCAGCTCAGGGTCCTCTGTaGTACCCGTGCGTCATGGGC +
Preference number: 4 (lower is better)
Translates to: LENKLGLATKCKPFLHYPAQGPL*YPCVMG
Trigger: GCCCATGACGCACGGGTACCACAGAGGACCCTGAGC...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGTTGCTCAACACATCCTaGACAATCGGGCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKLLNTS*TIGLGK
Trigger: TTTGCCAAGCCCGATTGTCCAGGATGTGTTGAGCAA...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCGAAGTCATGCTTGCCTaGGGGTCCTCGTCCACACGG +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFEVMLA*GSSSTR
Trigger: CCGTGTGGACGAGGACCCCCAGGCAAGCATGACTTC...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCCATCTGAAGAAACGTTaGATGCTCTCATCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVHLKKR*MLSSAA
Trigger: GGCGGCAGATGAGAGCATCCAACGTTTCTTCAGATG...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCACATCTGAAGAAACGTTaGATGCTCTCATCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSHLKKR*MLSSAA
Trigger: GGCGGCAGATGAGAGCATCCAACGTTTCTTCAGATG...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAGGCATGGGCGGCCTaGAAGCCGGCTGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKQAWAA*KPAAKR
Trigger: TCTTTTTGCAGCCGGCTTCCAGGCCGCCCATGCCTG...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434675.5
CDS-3UTR TCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATACCTATTTCACTTAAGTaGGGTTCCTCTTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIPISLK*GSSLLY
Trigger: GTACAACAAAGAGGAACCTCACTTAAGTGAAATAGG...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCAAACTTTCCCTGGATTaGAGCACACAAGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLKLSLD*STQETK
Trigger: CTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTT...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCTTCTCTCCTTCATTaGTCCCTAAAAGGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSPSLLH*SLKGSF
Trigger: AAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGG...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTAATCAAATGCAGAAGTaGTCCTCTAACCTCATCACT +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSNQMQK*SSNLIT
Trigger: AGTGATGAGGTTAGAGGATCACTTCTGCATTTGATT...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR TCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCGATGACATGCTCACGTaGCATGGTTATGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSDDMLT*HGYALF
Trigger: AAACAGGGCATAACCATGTCACGTGAGCATGTCATC...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCGAGCAAGATTCCCAATaGAATTCATACACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSEQDSQ*NSYTVH
Trigger: ATGGACAGTGTATGAATTTCATTGGGAATCTTGCTC...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGTTTCTTCTCTCCCTaGCAAGTAATAGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSSFFSP*QVIVQK
Trigger: TTTCTGCACTATTACTTGTCAGGGAGAGAAGAAACT...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATATTCTTGACACTCCTTTaGGGGACAATTCTAAGTTTC +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIFLTLL*GTILSF
Trigger: GAAACTTAGAATTGTCCCTCAAAGGAGTGTCAAGAA...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTCATTGCTCACAAGTTTaGAGACTCTGTCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVAHCSQV*RLCQSP
Trigger: AGGACTTTGACAGAGTCTTCAAACTTGTGAGCAATG...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCACTCAGTACCTCCATCTaGAGAAACGTTGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSLSTSI*RNVGCS
Trigger: AGAGCATCCAACGTTTCTTCAGATGGAGGTACTGAG...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCATCTGAAGAAACCAAGTaGAGGCTTTCCAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEASEETK*RLSRLQ
Trigger: CTGGAGTCTGGAAAGCCTTCACTTGGTTTCTTCAGA...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399949.6
ENST00000409126.5
CDS-3UTR GCA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGAAATCGCTTATTCACTaGTTTGACGTTGTATGCGTT +
Preference number: 4 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKKSLIH*FDVVCV
Trigger: AACGCATACAACGTCAAAGCAGTGAATAAGCGATTT...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000399949.6
CDS-3UTR GCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCCAGACTCCAGAATCTTaGTATCTCCCCTCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSQTPES*YLPSSY
Trigger: GTAGCTAGAGGGGAGATAGCAAGATTCTGGAGTCTG...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR GCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATACGTTGGTCCGCATCTaGTGCTTGTTCTCACAGTGT +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHTLVRI*CLFSQC
Trigger: ACACTGTGAGAACAAGCAGCAGATGCGGACCAACGT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTATGCTGCCTTTATGTTaGTGTAATCACCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVAMLPLC*CNHRVP
Trigger: AGGAACACGGTGATTACAGCAACATAAAGGCAGCAT...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCCTTCATGGCCTCATATaGTGCCTTTATGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLLHGLI*CLYVAV
Trigger: TACAGCAACATAAAGGCAGCATATGAGGCCATGAAG...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACCCCACGATAGACACCTaGCAGCGAGCTATCTTGTCG +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHPTIDT*QRAILS
Trigger: CGACAAGATAGCTCGCTGGCAGGTGTCTATCGTGGG...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGAGTACAGCATGTCCCTaGGCAGCAGGTCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRSTACP*AAGPSC
Trigger: GCAAGAAGGACCTGCTGCGCAGGGACATGCTGTACT...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAAGTACAGCATGTCCCTaGGCAGCAGGTCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRSTACP*AAGPSC
Trigger: GCAAGAAGGACCTGCTGCGCAGGGACATGCTGTACT...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAATCATCTGCACAGGCCTaGAGCCACCTCGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKSSAQA*SHLALS
Trigger: AGACAAGGCGAGGTGGCTGCAGGCCTGTGCAGATGA...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAACCTGCAGCAGGCACTTaGTCATCATCAGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKPAAGT*SSSAGV
Trigger: CACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGG...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAATCCTTGAAAATCAAATaGAGAAGTGATCCTCTAACC +
Preference number: 4 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKSLKIK*RSDPLT
Trigger: GGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGA...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGATCCTTGAAAATCAAATaGAGAAGTGATCCTCTAACC +
Preference number: 4 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGSLKIK*RSDPLT
Trigger: GGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGA...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGATGTGGACACAGACGATaGCAGGGAACACCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRCGHRR*QGTPWS
Trigger: TGACCACGGTGTTCCCTGGCATCGTCTGTGTCCACA...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTGTGCCTTCTGACCAGTaGATTTTCATATTCACTGTA +
Preference number: 4 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSVPSDQ*IFIFTV
Trigger: TACAGTGAATATGAAAATGCACTGGTCAGAAGGCAC...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGAGAAGCCTGATGACATaGTCACGTGACATGGTTATG +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKRSLMT*SRDMVM
Trigger: CATAACCATGTCACGTGAGCATGTCATCAGGCTTCT...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTGACACCAAGTTGATCTaGATGAAGGAGTATCAGCAA +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVADTKLI*MKEYQQ
Trigger: TTGCTGATACTCCTTCATGCAGATCAACTTGGTGTC...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAAGAGGGGTGGGAGGCTaGTCAGGGTCAAATGTCAAC +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRRGVGG*SGSNVN
Trigger: GTTGACATTTGACCCTGAGCAGCCTCCCACCCCTCT...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACTTCTTCTGGGCCGGCTaGCACACCAATGTTCACCAG +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHFFWAG*HTNVHQ
Trigger: CTGGTGAACATTGGTGTGGCAGCCGGCCCAGAAGAA...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCATCATCCATGGTCACATaGTCCCACAGGGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPSSMVT*SHRASA
Trigger: CGCAGAAGCCCTGTGGGACCATGTGACCATGGATGA...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACGAGGCTTCCAGAACCTaGATGACATCCCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHEASRT*MTSPAL
Trigger: CAAAGCCGGGGATGTCATCCAGGTTCTGGAAGCCTC...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTGGAAGTTTTTATCACTaGGTCCAAGAAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSGSFYH*VQETFP
Trigger: AGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCC...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAATTATTAGTAGAGACTaGGCTTTGCCATATTGGCCA +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIIISRD*ALPYWP
Trigger: TGGCCAATATGGCAAAGCCCAGTCTCTACTAATAAT...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTCACCTGATAAAATGCTaGTTCAGCTGGCTTTTACAA +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSHLIKC*FSWLLQ
Trigger: TTGTAAAAGCCAGCTGAACCAGCATTTTATCAGGTG...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGTTGTACACTATACTTTaGCTGTCAACAGCAAATTCC +
Preference number: 4 (lower is better)
Translates to: MWARCDFCSELLKACRQELYTIL*LSTANS
Trigger: GGAATTTGCTGTTGACAGCCAAAGTATAGTGTACAA...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCAGCTTTTGGGAGTCAGTaGAGGAACTGCTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPAFGSQ*RNCSGS
Trigger: GGACCCTGAGCAGTTCCTCCACTGACTCCCAAAAGC...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCATTGCTCAACACATCCTaGACAATCGGGCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEALLNTS*TIGLGK
Trigger: TTTGCCAAGCCCGATTGTCCAGGATGTGTTGAGCAA...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCACACGGTCTTCCTTCTaGGGGTCTGCAGCAACCGAG +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFTRSSF*GSAATE
Trigger: CTCGGTTGCTGCAGACCCCCAGAAGGAAGACCGTGT...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CAA 72 bp GTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTaGAAAATCAAATGCAGAAGTGATCCTCTAACCTCA +
Preference number: 4 (lower is better)
Translates to: VQHCVNPVLTAS*KIKCRSDPLTS
Trigger: TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
3UTR CAA 72 bp AGCTCAATTTCTAAGTGTGACCAGACACGTGCAGCATaGTGTCAACCCCGTCTTGACGGCATCCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SSISKCDQTRAA*CQPRLDGILEN
Trigger: ATTTTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACACTTAGAAATTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAACTAGCTGCGCAACGGTaGACATTCCTGTGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKLAAQR*TFLCAC
Trigger: GCAAGCACACAGGAATGTTCACCGTTGCGCAGCTAG...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACAACTTGCCCTGCTTCATaGGGTTGGCGAGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTTCPAS*GWRAPG
Trigger: GCCTGGAGCTCGCCAACCTCATGAAGCAGGGCAAGT...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGAGGCATTTTTCACGCTaGGGTTGCAGTCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRRHFSR*GCSPCR
Trigger: GCGACAAGGACTGCAACCTCAGCGTGAAAAATGCCT...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGAAACTTTCCCTGGATTaGAGCACACAAGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEEKLSLD*STQETK
Trigger: CTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTT...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGATCTTTAATGGAGTaGCCCTCACACTCTATAAAA +
Preference number: 4 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSRSLME*PSHSIK
Trigger: TTTTATAGAGTGTGAGGGTCACTCCATTAAAGATCT...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGAGATCTTTAATGGAGTaGCCCTCACACTCTATAAAA +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRRSLME*PSHSIK
Trigger: TTTTATAGAGTGTGAGGGTCACTCCATTAAAGATCT...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGTTGGCAAATGGAAGATaGGAATACTTGAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKLANGR*EYLSLP
Trigger: TGGAAGGCTCAAGTATTCTCATCTTCCATTTGCCAA...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTAGTTTCTTCTCTCCCTaGCAAGTAATAGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVASFFSP*QVIVQK
Trigger: TTTCTGCACTATTACTTGTCAGGGAGAGAAGAAACT...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCAATTCCTTTCAGGACTaGGGACTTCAGTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLNSFQD*GLQFLK
Trigger: TTTAAGAAACTGAAGTCCTCAGTCCTGAAAGGAATT...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACTCCTTCACTTTCCTCTaGATTCGCGGACAGGGCACT +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNSFTFL*IRGQGT
Trigger: AGTGCCCTGTCCGCGAATTCAGAGGAAAGTGAAGGA...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCATGCACCAGCTACTCTTaGAGACAAGCTCTTCACGGC +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPCTSYS*RQALHG
Trigger: GCCGTGAAGAGCTTGTCTTCAAGAGTAGCTGGTGCA...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACTTCCTTATCTTCACTaGGGCCCCACCACCAGTCCT +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKLPYLH*GPTTSP
Trigger: AGGACTGGTGGTGGGGCCGCAGTGAAGATAAGGAAG...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAACGCCCGGGTGGTTGTTaGAGTACTCGGAATAGATGG +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKRPGGC*STRNRW
Trigger: CCATCTATTCCGAGTACTGCAACAACCACCCGGGCG...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACTGTCTGTACTTGCCCTaGTTCATGAGGTTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHCLYLP*FMRLAS
Trigger: GCTCGCCAACCTCATGAAGCAGGGCAAGTACAGACA...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGAGCTATCTTGTCGATaGTCTCCAGCTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRELSCR*SPACAC
Trigger: GCAAGCGCAAGCTGGAGAGCATCGACAAGATAGCTC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACGAGCTATCTTGTCGATaGTCTCCAGCTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNELSCR*SPACAC
Trigger: GCAAGCGCAAGCTGGAGAGCATCGACAAGATAGCTC...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCAGAGCTATCTTGTCGATaGTCTCCAGCTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPELSCR*SPACAC
Trigger: GCAAGCGCAAGCTGGAGAGCATCGACAAGATAGCTC...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCTGCTGGCTTTTGCCTTaGTTAGTGATTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVCWLLP*LVILVS
Trigger: GCTGACCAAAATCACTAAGCAAGGCAAAAGCCAGCA...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCTGCTGGCTTTTGCCTTaGTTAGTGATTTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSCWLLP*LVILVS
Trigger: GCTGACCAAAATCACTAAGCAAGGCAAAAGCCAGCA...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGAGCCTGTTGAAGGTGTaGCAGAAGAGCGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRSLLKV*QKSEDF
Trigger: GAAGTCCTCGCTCTTCTGGCACACCTTCAACAGGCT...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACAGCCTGTTGAAGGTGTaGCAGAAGAGCGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHSLLKV*QKSEDF
Trigger: GAAGTCCTCGCTCTTCTGGCACACCTTCAACAGGCT...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGATGCTGTGTTTGGACCTaGAGCAGGCACTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRCCVWT*SRHLLI
Trigger: GATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCA...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR GCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGTCCTTGAAAATCAAATaGAGAAGTGATCCTCTAACC +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACRSLKIK*RSDPLT
Trigger: GGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGA...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCTGTGGACACAGACGATaGCAGGGAACACCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFCGHRR*QGTPWS
Trigger: TGACCACGGTGTTCCCTGGCATCGTCTGTGTCCACA...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAATCTCTCCACTTTGCTTaGAGGAAGAGGAACCTTGCA +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKSLHFA*RKRNLA
Trigger: TGCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGA...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCAGAAGCCTGATGACATaGTCACGTGACATGGTTATG +
Preference number: 4 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVRSLMT*SRDMVM
Trigger: CATAACCATGTCACGTGAGCATGTCATCAGGCTTCT...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGGCCTGTAAGCATGTGTaGCAAGGTGGCTCAGAATGG +
Preference number: 4 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRACKHV*QGGSEW
Trigger: CCATTCTGAGCCACCTTGGCACACATGCTTACAGGC...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAAGTTATTGCTAAGGTGTaGAGGAAAAGCATATTAAGT +
Preference number: 4 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKVIAKV*RKSILS
Trigger: ACTTAATATGCTTTTCCTGCACACCTTAGCAATAAC...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCGTTATTGCTAAGGTGTaGAGGAAAAGCATATTAAGT +
Preference number: 4 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSVIAKV*RKSILS
Trigger: ACTTAATATGCTTTTCCTGCACACCTTAGCAATAAC...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGACCAGCATACTACTGCTaGCCTCTTTCTAGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRPAYYC*PLSSPQ
Trigger: CTGCGGACTAGAAAGAGGGCAGCAGTAGTATGCTGG...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGGCTCCAGCATACTACTaGTGCCCTCTTTCTAGTCCG +
Preference number: 4 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRAPAYY*CPLSSP
Trigger: CGGACTAGAAAGAGGGCAGCAGTAGTATGCTGGAGC...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACTTCATCTCCAGGAATaGCGTCCTGGCACTCACACC +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKLHLQE*RPGTHT
Trigger: GGTGTGAGTGCCAGGACGGCATTCCTGGAGATGAAG...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCGGCCGTCCTGAGGTCTaGAAGATTGGAGGTGGACTT +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFGRPEV*KIGGGL
Trigger: AAGTCCACCTCCAATCTTGCAGACCTCAGGACGGCC...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCGGCTTGGCAAAGAGCTaGAAGTGCAGGAACTGTCGC +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFGLAKS*KCRNCR
Trigger: GCGACAGTTCCTGCACTTGCAGCTCTTTGCCAAGCC...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAATCATCCATGGTCACATaGTCCCACAGGGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKSSMVT*SHRASA
Trigger: CGCAGAAGCCCTGTGGGACCATGTGACCATGGATGA...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGGCTTCCAGAACCTaGATGACATCCCCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKEASRT*MTSPAL
Trigger: CAAAGCCGGGGATGTCATCCAGGTTCTGGAAGCCTC...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACCAGGACACCAGCTGGTaGTCAAACAGGAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHQDTSW*SNRKNV
Trigger: GACGTTCTTCCTGTTTGACCACCAGCTGGTGTCCTG...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACACTCGCTTTAGAGCATaGTACCGGGTCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNTRFRA*YRVPHL
Trigger: CAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACCATCATCAGCAGGGGTaGCTTCAGCTGCTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNHHQQG*LQLLPN
Trigger: ATTAGGCAGCAGCTGAAGCCACCCCTGCTGATGATG...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACCAAGGTGGCTCAGAATaGACATCAGGCGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHQGGSE*TSGGHR
Trigger: TCTGTGACCGCCTGATGTCCATTCTGAGCCACCTTG...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACCAAGGTGGCTCAGAATaGACATCAGGCGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNQGGSE*TSGGHR
Trigger: TCTGTGACCGCCTGATGTCCATTCTGAGCCACCTTG...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGAACAGTCATGTAGGATaGGGGGATTTTCTGAATAAG +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEENSHVG*GDFLNK
Trigger: CTTATTCAGAAAATCCCCCCATCCTACATGACTGTT...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCAGGAGTATCAGCAATTTaGCTTGCAGAGATTTCCACC +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSGVSAI*LAEIST
Trigger: GGTGGAAATCTCTGCAAGCCAAATTGCTGATACTCC...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCACTGTTCTATTCTGACTaGGACACCAAGTTGATCTGC +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSLFYSD*DTKLIC
Trigger: GCAGATCAACTTGGTGTCCCAGTCAGAATAGAACAG...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAACCGTCCTCTTCCGACTaGTGGAAAAGAGGCGCACAA +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKPSSSD*WKRGAQ
Trigger: TTGTGCGCCTCTTTTCCACCAGTCGGAAGAGGACGG...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAGCGCCATTTGGGATaGACTTTCCCAGGCCATGCT +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKQRHLG*TFPGHA
Trigger: AGCATGGCCTGGGAAAGTCCATCCCAAATGGCGCTG...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACCCTGACCCAAGCTTTTaGGAGTCAGTGGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHPDPSF*ESVEEL
Trigger: CAGTTCCTCCACTGACTCCCAAAAGCTTGGGTCAGG...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACTCTGTCAAAGTCCTTaGCCCTTATCGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKLCQSP*PLSGSS
Trigger: GGAGGAGCCCGATAAGGGCCAAGGACTTTGACAGAG...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACTCTGGTCTTCAGGGCTaGCAGAAGTCATGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNSGLQG*QKSCLP
Trigger: AGGCAAGCATGACTTCTGCCAGCCCTGAAGACCAGA...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAATTTGGGGCAGCCCACTaGAGCATTCTGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKFGAAH*SILVFR
Trigger: CCTGAAGACCAGAATGCTCCAGTGGGCTGCCCCAAA...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACACACCTATCACGGAAATaGGGCGCCTTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTHLSRK*GAFSGL
Trigger: GAGCCCGGAGAAGGCGCCCCATTTCCGTGATAGGTG...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CAA 72 bp GATGAAGGTGACAGATGCATCTTCTTTCTCTCCACTTaGCTTGCAGGAAGAGGAACCTTGCAGGATGACATT +
Preference number: 4 (lower is better)
Translates to: DEGDRCIFFLST*LAGRGTLQDDI
Trigger: AATGTCATCCTGCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGAAAGAAGATGCATCTGTCACCTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGTTTGAGAGTGCCTTCTaGCCAGTGCATTTTCATATT +
Preference number: 4 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKFESAF*PVHFHI
Trigger: AATATGAAAATGCACTGGTCAGAAGGCACTCTCAAA...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTATACACCTTTGTCTCTaGCATCACAGACTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVAIHLCL*HHRLVY
Trigger: ATAAACAAGTCTGTGATGTCAGAGACAAAGGTGTAT...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTAAAGTCGACCAATTCTaGAACGTGAAGAATGGAATA +
Preference number: 4 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVAKVDQF*NVKNGI
Trigger: TATTCCATTCTTCACGTTTCAGAATTGGTCGACTTT...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGAAAGTCGACCAATTCTaGAACGTGAAGAATGGAATA +
Preference number: 4 (lower is better)
Translates to: EAGESKIPNEIHTLSMEEKVDQF*NVKNGI
Trigger: TATTCCATTCTTCACGTTTCAGAATTGGTCGACTTT...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCTCCCTTGTCAGAGCTTaGCAAGGTTTGAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFSLVRA*QGLKLA
Trigger: GGCCAGCTTCAAACCTTGTCAAGCTCTGACAAGGGA...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS-3UTR GCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCATGCTTTGACGTTGTATaGGTTCCCGGCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LENKLGLATKCKPFLHYPCFDVV*VPGQSL
Trigger: CAGGCTCTGGCCGGGAACGCATACAACGTCAAAGCA...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343003.10
CDS-3UTR GCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACACGTTGGTCCGCATCTaGTGCTTGTTCTCACAGTGT +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNTLVRI*CLFSQC
Trigger: ACACTGTGAGAACAAGCAGCAGATGCGGACCAACGT...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATAAAATAGTGGCTAGCTaGGCAACGGTGAACATTCCT +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHKIVAS*ATVNIP
Trigger: AGGAATGTTCACCGTTGCGCAGCTAGCCACTATTTT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAATGTCTGTACTTGCCCTaGTTCATGAGGTTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKCLYLP*FMRLAS
Trigger: GCTCGCCAACCTCATGAAGCAGGGCAAGTACAGACA...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCACATGGCCTCATATGCTaGCTTTATGTTGCTGTAATC +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSHGLIC*LYVAVI
Trigger: GATTACAGCAACATAAAGGCAGCATATGAGGCCATG...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCCTTCATGGCCTCATATaGTGCCTTTATGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVLHGLI*CLYVAV
Trigger: TACAGCAACATAAAGGCAGCATATGAGGCCATGAAG...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGCTATCTTGTCGATaGTCTCCAGCTTGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKELSCR*SPACAC
Trigger: GCAAGCGCAAGCTGGAGAGCATCGACAAGATAGCTC...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCACCCACGATAGACACCTaGCAGCGAGCTATCTTGTCG +
Preference number: 4 (lower is better)
Translates to: LENKLGLATKCKPFLHYPPTIDT*QRAILS
Trigger: CGACAAGATAGCTCGCTGGCAGGTGTCTATCGTGGG...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAATCTCCTTGTCCTCTTaGACCCGCCTCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRISLSS*TRLLSS
Trigger: AGATGAAAGGAGGCGGGTGCAAGAGGACAAGGAGAT...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACGGTGGCTTCAGCTGCTaGCTAATCACTCGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHGGFSC*LITRFR
Trigger: TCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCATGTGGACACAGACGATaGCAGGGAACACCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LENKLGLATKCKPFLHYPCGHRR*QGTPWS
Trigger: TGACCACGGTGTTCCCTGGCATCGTCTGTGTCCACA...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAGATGAAGGTGACAGATaGATCTTCTTTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEADEGDR*IFFLST
Trigger: AGTGGAGAGAAAGAAGATGCATCTGTCACCTTCATC...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATAGGCATGCGCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHRHAPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGCGCATGCCT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCCACGTGACATGGTTATaGCCTGTTTGGCTTTATATG +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSHVTWL*PVWLYM
Trigger: CATATAAAGCCAAACAGGGCATAACCATGTCACGTG...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCGTTATTGCTAAGGTGTaGAGGAAAAGCATATTAAGT +
Preference number: 4 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSVIAKV*RKSILS
Trigger: ACTTAATATGCTTTTCCTGCACACCTTAGCAATAAC...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCCCAGCATACTACTGCTaGCCTCTTTCTAGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFPAYYC*PLSSPQ
Trigger: CTGCGGACTAGAAAGAGGGCAGCAGTAGTATGCTGG...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGGAAATCCACTTTCATTaGATCCTGAAAACAATGAGA +
Preference number: 4 (lower is better)
Translates to: YSMWARCDFCSELLKACREIHFH*ILKTMR
Trigger: TCTCATTGTTTTCAGGATGCAATGAAAGTGGATTTC...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACTTGGGGGTTCTCTGTaGCTCTGTCCTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKLGGSL*LCPFLI
Trigger: GATGAGGAAAGGACAGAGGCACAGAGAACCCCCAAG...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATATTGAGTATGAGTCCTTaGTCAAGTTTCTTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LITRFRAWYRVPHLGHLILSMSP*SSFFLC
Trigger: ACAAAGAAAGAAACTTGACCAAGGACTCATACTCAA...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343003.10
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAACCACCAGTCCTTGTTaGAGGCTTCCAGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKTTSPC*RLPEPG
Trigger: TCCAGGTTCTGGAAGCCTCCAACAAGGACTGGTGGT...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAGGACACCAGCTGGTaGTCAAACAGGAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKQDTSW*SNRKNV
Trigger: GACGTTCTTCCTGTTTGACCACCAGCTGGTGTCCTG...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACATCATCAGCAGGGGTaGCTTCAGCTGCTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKHHQQG*LQLLPN
Trigger: ATTAGGCAGCAGCTGAAGCCACCCCTGCTGATGATG...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCTTAGGTTACAGCATGTaGGCAAGATGTGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVLGYSM*ARCDFC
Trigger: GCAGAAATCACATCTTGCCCACATGCTGTAACCTAA...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACAGGGAGGTCACCATCTTaGCGTCTTTCAGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTGRSPS*RLSGPS
Trigger: GCTCGGACCTGAAAGACGCCAAGATGGTGACCTCCC...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCTCTGGTCTTCAGGGCTaGCAGAAGTCATGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFSGLQG*QKSCLP
Trigger: AGGCAAGCATGACTTCTGCCAGCCCTGAAGACCAGA...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAAAACTTTCCCTGGATTaGAGCACACAAGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEAKLSLD*STQETK
Trigger: CTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTT...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACCATGTGGGCAAGATGTaGTTTCTGCTCGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHHVGKM*FLLGVT
Trigger: AGTAACTCCGAGCAGAAATCACATCTTGCCCACATG...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCTTTGAGAGTGCCTTCTaGCCAGTGCATTTTCATATT +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSFESAF*PVHFHI
Trigger: AATATGAAAATGCACTGGTCAGAAGGCACTCTCAAA...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCAGATGACATGCTCACGTaGCATGGTTATGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPDDMLT*HGYALF
Trigger: AAACAGGGCATAACCATGTCACGTGAGCATGTCATC...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACTCCATTTCTGGCCTGTaGGCTGGTGAAAGGACATTT +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNSISGL*AGERTF
Trigger: AAATGTCCTTTCACCAGCTCACAGGCCAGAAATGGA...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACAGACCCCTCTCGGCTCTaGATTCCTTTCAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTDPSRL*IPFRTE
Trigger: CTCAGTCCTGAAAGGAATTCAGAGCCGAGAGGGGTC...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCATGGTCCCATACAAGCTaGCCCCACCTATCACGGAAA +
Preference number: 4 (lower is better)
Translates to: LENKLGLATKCKPFLHYPWSHTS*PHLSRK
Trigger: TTTCCGTGATAGGTGGGGTCAGCTTGTATGGGACCA...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACCTCAGTACCTCCATCTaGAGAAACGTTGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHLSTSI*RNVGCS
Trigger: AGAGCATCCAACGTTTCTTCAGATGGAGGTACTGAG...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCACGTTGGTCCGCATCTaGTGCTTGTTCTCACAGTGT +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFTLVRI*CLFSQC
Trigger: ACACTGTGAGAACAAGCAGCAGATGCGGACCAACGT...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAGTGAACATTCCTGTGTaGTTGCGGCACTGTCGGATA +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKVNIPV*LRHCRI
Trigger: TATCCGACAGTGCCGCAAGCACACAGGAATGTTCAC...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAAATGCTGCCTTTATGTTaGTGTAATCACCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKMLPLC*CNHRVP
Trigger: AGGAACACGGTGATTACAGCAACATAAAGGCAGCAT...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATATGCTGCCTTTATGTTaGTGTAATCACCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHMLPLC*CNHRVP
Trigger: AGGAACACGGTGATTACAGCAACATAAAGGCAGCAT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAAGGAAGAACGTCCGCTaGTGGCTTTTGCCTTGCTTA +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKRKNVR*WLLPCL
Trigger: TAAGCAAGGCAAAAGCCAGCAGCGGACGTTCTTCCT...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAATCTCCTTGTCCTCTTaGACCCGCCTCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKISLSS*TRLLSS
Trigger: AGATGAAAGGAGGCGGGTGCAAGAGGACAAGGAGAT...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAATCTCCTTGTCCTCTTaGACCCGCCTCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKISLSS*TRLLSS
Trigger: AGATGAAAGGAGGCGGGTGCAAGAGGACAAGGAGAT...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCAAGGGGTGGCTTCAGCTaGTGCCTAATCACTCGCTTT +
Preference number: 4 (lower is better)
Translates to: LENKLGLATKCKPFLHYPRGGFS*CLITRF
Trigger: AAAGCGAGTGATTAGGCAGCAGCTGAAGCCACCCCT...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGGTGCCACACACCTaGAGACTGAAGAATACACCT +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKEVPHT*RLKNTP
Trigger: AGGTGTATTCTTCAGTCTGCAGGTGTGTGGCACCTC...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACATTCCTTCTGGGGGTCTaGAGCAACCGAGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTFLLGV*SNRVFR
Trigger: CCTGAAGACTCGGTTGCTGCAGACCCCCAGAAGGAA...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCAAGAACGTCCGCTGCTaGCTTTTGCCTTGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFKNVRC*LLPCLV
Trigger: CACTAAGCAAGGCAAAAGCCAGCAGCGGACGTTCTT...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAAAGAACGTCCGCTGCTaGCTTTTGCCTTGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKKNVRC*LLPCLV
Trigger: CACTAAGCAAGGCAAAAGCCAGCAGCGGACGTTCTT...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAAAGAACGTCCGCTGCTaGCTTTTGCCTTGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKKNVRC*LLPCLV
Trigger: CACTAAGCAAGGCAAAAGCCAGCAGCGGACGTTCTT...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCACCAAGAAACTTTCCCTaGATTGAAGCACACAAGAAA +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSPRNFP*IEAHKK
Trigger: TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGG...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCGGAAGTTTTTATCACTaGGTCCAAGAAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSGSFYH*VQETFP
Trigger: AGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCC...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCGGAAGTTTTTATCACTaGGTCCAAGAAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVGSFYH*VQETFP
Trigger: AGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCC...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCAACTCGCTTTAGAGCATaGTACCGGGTCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: LENKLGLATKCKPFLHYPTRFRA*YRVPHL
Trigger: CAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAATTATTAGTAGAGACTaGGCTTTGCCATATTGGCCA +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEAIISRD*ALPYWP
Trigger: TGGCCAATATGGCAAAGCCCAGTCTCTACTAATAAT...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCAGCATGTGTGCCAAGGTaGCTCAGAATGGACATCAGG +
Preference number: 4 (lower is better)
Translates to: LENKLGLATKCKPFLHYPACVPR*LRMDIR
Trigger: CCTGATGTCCATTCTGAGCCACCTTGGCACACATGC...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAAACAGTCATGTAGGATaGGGGGATTTTCTGAATAAG +
Preference number: 4 (lower is better)
Translates to: STQETKTVLLLTPSSMEANSHVG*GDFLNK
Trigger: CTTATTCAGAAAATCCCCCCATCCTACATGACTGTT...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATAATCAAATGCAGAAGTaGTCCTCTAACCTCATCACT +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHNQMQK*SSNLIT
Trigger: AGTGATGAGGTTAGAGGATCACTTCTGCATTTGATT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR TCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGCAGTGGATTCTTaGGGATGCGTAAGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNKAVDS*GCVSCS
Trigger: AGAGCAACTTACGCATCCTCAAGAATCCACTGCTTT...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR TCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGATAAAGGCAGCTTCTaGTTTCCAAGAAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRDKGSF*FPRSRT
Trigger: AGTCCTGCTTCTTGGAAATCAGAAGCTGCCTTTATC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGTAGTTTCACCTAGTTaGCTTGGGTCCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRVVSPS*LGSSIS
Trigger: AGAAATGGAGGACCCAAGTCAACTAGGTGAAACTAC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACGTAGTTTCACCTAGTTaGCTTGGGTCCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNVVSPS*LGSSIS
Trigger: AGAAATGGAGGACCCAAGTCAACTAGGTGAAACTAC...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCATCCTTGAAAATCAAATaGAGAAGTGATCCTCTAACC +
Preference number: 4 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSSLKIK*RSDPLT
Trigger: GGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGA...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACCAGGAAGAGGAACCTTaGAGGATGACATTTGCACTA +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHQEEEP*RMTFAL
Trigger: TAGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTG...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATAGTACTCGGAATAGATaGCAAAGCCCTCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHSTRNR*QSPLDF
Trigger: AAAATCAAGAGGGCTTTGCCATCTATTCCGAGTACT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAAGGCCACATTCTTCATaGCCTCATATGCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRRPHSS*PHMLPL
Trigger: TAAAGGCAGCATATGAGGCCATGAAGAATGTGGCCT...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATAACAGTCATGTAGGATaGGGGGATTTTCTGAATAAG +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHNSHVG*GDFLNK
Trigger: CTTATTCAGAAAATCCCCCCATCCTACATGACTGTT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAACACCTGATAAAATGCTaGTTCAGCTGGCTTTTACAA +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKHLIKC*FSWLLQ
Trigger: TTGTAAAAGCCAGCTGAACCAGCATTTTATCAGGTG...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACGGAGTATCAGCAATTTaGCTTGCAGAGATTTCCACC +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNGVSAI*LAEIST
Trigger: GGTGGAAATCTCTGCAAGCCAAATTGCTGATACTCC...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CAA 72 bp GTAATTATGCTGTTCTATTCTGACTGGGACACCAAGTaGATCTGCATGAAGGAGTATCAGCAATTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VIMLFYSDWDTK*ICMKEYQQFGL
Trigger: CAAGCCAAATTGCTGATACTCCTTCATGCAGATCAACTTGGTGTCCCAGTCAGAATAGAACAGCATAATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCACATGTGGGCAAGATGTaGTTTCTGCTCGGAGTTACT +
Preference number: 4 (lower is better)
Translates to: LENKLGLATKCKPFLHYPHVGKM*FLLGVT
Trigger: AGTAACTCCGAGCAGAAATCACATCTTGCCCACATG...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCAGATGACATGCTCACGTaGCATGGTTATGCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: LENKLGLATKCKPFLHYPDDMLT*HGYALF
Trigger: AAACAGGGCATAACCATGTCACGTGAGCATGTCATC...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAAATACACCTTTGTCTCTaGCATCACAGACTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKIHLCL*HHRLVY
Trigger: ATAAACAAGTCTGTGATGTCAGAGACAAAGGTGTAT...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATAAAGTCGACCAATTCTaGAACGTGAAGAATGGAATA +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHKVDQF*NVKNGI
Trigger: TATTCCATTCTTCACGTTTCAGAATTGGTCGACTTT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAATGGCCTGTGAGCTGGTaGAAGGACATTTATTCATAC +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKWPVSW*KDIYSY
Trigger: GTATGAATAAATGTCCTTTCACCAGCTCACAGGCCA...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATAAATCGCTTATTCACTaGTTTGACGTTGTATGCGTT +
Preference number: 4 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHKSLIH*FDVVCV
Trigger: AACGCATACAACGTCAAAGCAGTGAATAAGCGATTT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000399949.6
CDS-3UTR GCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACATTGGTCCGCATCTGCTaGTTGTTCTCACAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTLVRIC*LFSQCL
Trigger: CAGACACTGTGAGAACAAGCAGCAGATGCGGACCAA...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAATGCTGCCTTTATGTTaGTGTAATCACCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRMLPLC*CNHRVP
Trigger: AGGAACACGGTGATTACAGCAACATAAAGGCAGCAT...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCAATGCTGCCTTTATGTTaGTGTAATCACCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPMLPLC*CNHRVP
Trigger: AGGAACACGGTGATTACAGCAACATAAAGGCAGCAT...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGCATGGCCTCATATGCTaGCTTTATGTTGCTGTAATC +
Preference number: 4 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRHGLIC*LYVAVI
Trigger: GATTACAGCAACATAAAGGCAGCATATGAGGCCATG...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACCTTCATGGCCTCATATaGTGCCTTTATGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNLHGLI*CLYVAV
Trigger: TACAGCAACATAAAGGCAGCATATGAGGCCATGAAG...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR GCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACAGGTGGCTTCAGCTGCTaGCTAATCACTCGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTGGFSC*LITRFR
Trigger: TCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACATCACTCCTTAGGAACTaGAAAGCCCTGGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTSLLRN*KALDAV
Trigger: CACAGCATCCAGGGCTTTGCAGTTCCTAAGGAGTGA...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGATGAAGGTGACAGATaGATCTTCTTTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRDEGDR*IFFLST
Trigger: AGTGGAGAGAAAGAAGATGCATCTGTCACCTTCATC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGATACCATCCTTCTGTTTaGAAAACGGCAACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRYHPSV*KTATFR
Trigger: TCTGAAGGTTGCCGTTTTCCAAACAGAAGGATGGTA...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAAGGCCACATTCTTCATaGCCTCATATGCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKRPHSS*PHMLPL
Trigger: TAAAGGCAGCATATGAGGCCATGAAGAATGTGGCCT...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCAAGGTGTCAGCCTAGGTaGCCTTTGTTAATAAAGACT +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPRCQPR*PLLIKT
Trigger: AGTCTTTATTAACAAAGGCCACCTAGGCTGACACCT...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGACCTATTTCACTTAAGTaGGGTTCCTCTTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRPISLK*GSSLLY
Trigger: GTACAACAAAGAGGAACCTCACTTAAGTGAAATAGG...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAACTTTCCCTGGATTaGAGCACACAAGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNKLSLD*STQETK
Trigger: CTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTT...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACCCTTCTCTCCTTCATTaGTCCCTAAAAGGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNPSLLH*SLKGSF
Trigger: AAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGG...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR TCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCAAATCAAATGCAGAAGTaGTCCTCTAACCTCATCACT +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPNQMQK*SSNLIT
Trigger: AGTGATGAGGTTAGAGGATCACTTCTGCATTTGATT...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR TCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAATCAAATGCAGAAGTaGTCCTCTAACCTCATCACT +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNNQMQK*SSNLIT
Trigger: AGTGATGAGGTTAGAGGATCACTTCTGCATTTGATT...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR TCA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGGAGCAAGATTCCCAATaGAATTCATACACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: MYNIDKEKEMIICRCQPREQDSQ*NSYTVH
Trigger: ATGGACAGTGTATGAATTTCATTGGGAATCTTGCTC...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACTTCTTGACACTCCTTTaGGGGACAATTCTAAGTTTC +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHFLTLL*GTILSF
Trigger: GAAACTTAGAATTGTCCCTCAAAGGAGTGTCAAGAA...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCGATGAAGGTGACAGATaGATCTTCTTTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFDEGDR*IFFLST
Trigger: AGTGGAGAGAAAGAAGATGCATCTGTCACCTTCATC...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGATGAAGGTGACAGATaGATCTTCTTTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKDEGDR*IFFLST
Trigger: AGTGGAGAGAAAGAAGATGCATCTGTCACCTTCATC...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGTGCCTTCTGACCAGTaGATTTTCATATTCACTGTA +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRVPSDQ*IFIFTV
Trigger: TACAGTGAATATGAAAATGCACTGGTCAGAAGGCAC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACTTCCACCTGATAAAATaGTGGTTCAGCTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHFHLIK*WFSWLL
Trigger: TAAAAGCCAGCTGAACCAGCATTTTATCAGGTGGAA...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGATTCCACCTGATAAAATaGTGGTTCAGCTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRFHLIK*WFSWLL
Trigger: TAAAAGCCAGCTGAACCAGCATTTTATCAGGTGGAA...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAGACACCAAGTTGATCTaGATGAAGGAGTATCAGCAA +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKDTKLI*MKEYQQ
Trigger: TTGCTGATACTCCTTCATGCAGATCAACTTGGTGTC...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAGTACTCGGAATAGATaGCAAAGCCCTCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNSTRNR*QSPLDF
Trigger: AAAATCAAGAGGGCTTTGCCATCTATTCCGAGTACT...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACAGTACTCGGAATAGATaGCAAAGCCCTCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHSTRNR*QSPLDF
Trigger: AAAATCAAGAGGGCTTTGCCATCTATTCCGAGTACT...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACCCAAGAAACTTTCCCTaGATTGAAGCACACAAGAAA +
Preference number: 4 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNPRNFP*IEAHKK
Trigger: TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGG...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGGAAGTTTTTATCACTaGGTCCAAGAAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRGSFYH*VQETFP
Trigger: AGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAATTAGGTTACAGCATGTaGGCAAGATGTGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKLGYSM*ARCDFC
Trigger: GCAGAAATCACATCTTGCCCACATGCTGTAACCTAA...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCACACCTGATAAAATGCTaGTTCAGCTGGCTTTTACAA +
Preference number: 4 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPHLIKC*FSWLLQ
Trigger: TTGTAAAAGCCAGCTGAACCAGCATTTTATCAGGTG...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCCCTATTTCACTTAAGTaGGGTTCCTCTTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFPISLK*GSSLLY
Trigger: GTACAACAAAGAGGAACCTCACTTAAGTGAAATAGG...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCCCTTCTCTCCTTCATTaGTCCCTAAAAGGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFPSLLH*SLKGSF
Trigger: AAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGG...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGATACACCTTTGTCTCTaGCATCACAGACTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRIHLCL*HHRLVY
Trigger: ATAAACAAGTCTGTGATGTCAGAGACAAAGGTGTAT...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAAGATCTTTAATGGAGTaGCCCTCACACTCTATAAAA +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRRSLME*PSHSIK
Trigger: TTTTATAGAGTGTGAGGGTCACTCCATTAAAGATCT...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCATTGGCAAATGGAAGATaGGAATACTTGAGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LENKLGLATKCKPFLHYPLANGR*EYLSLP
Trigger: TGGAAGGCTCAAGTATTCTCATCTTCCATTTGCCAA...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAATTCTTGACACTCCTTTaGGGGACAATTCTAAGTTTC +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKFLTLL*GTILSF
Trigger: GAAACTTAGAATTGTCCCTCAAAGGAGTGTCAAGAA...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAAATTCCTTTCAGGACTaGGGACTTCAGTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRNSFQD*GLQFLK
Trigger: TTTAAGAAACTGAAGTCCTCAGTCCTGAAAGGAATT...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAGTGCCTTCTGACCAGTaGATTTTCATATTCACTGTA +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKVPSDQ*IFIFTV
Trigger: TACAGTGAATATGAAAATGCACTGGTCAGAAGGCAC...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCAGTACTCGGAATAGATaGCAAAGCCCTCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFSTRNR*QSPLDF
Trigger: AAAATCAAGAGGGCTTTGCCATCTATTCCGAGTACT...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAAGTACTCGGAATAGATaGCAAAGCCCTCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKSTRNR*QSPLDF
Trigger: AAAATCAAGAGGGCTTTGCCATCTATTCCGAGTACT...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACAAGGCCACATTCTTCATaGCCTCATATGCTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTRPHSS*PHMLPL
Trigger: TAAAGGCAGCATATGAGGCCATGAAGAATGTGGCCT...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAGGAAGTTTTTATCACTaGGTCCAAGAAACTTTCCCT +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKGSFYH*VQETFP
Trigger: AGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCC...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAATTATTAGTAGAGACTaGGCTTTGCCATATTGGCCA +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKIISRD*ALPYWP
Trigger: TGGCCAATATGGCAAAGCCCAGTCTCTACTAATAAT...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAATTATTAGTAGAGACTaGGCTTTGCCATATTGGCCA +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKIISRD*ALPYWP
Trigger: TGGCCAATATGGCAAAGCCCAGTCTCTACTAATAAT...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CCA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAACACCTGATAAAATGCTaGTTCAGCTGGCTTTTACAA +
Preference number: 4 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKHLIKC*FSWLLQ
Trigger: TTGTAAAAGCCAGCTGAACCAGCATTTTATCAGGTG...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CAA 72 bp GTGAAAGGACATTTATTCATACTTCTTGACACTCCTTaGAGGGACAATTCTAAGTTTCTTCTCTCCCTGACA +
Preference number: 4 (lower is better)
Translates to: VKGHLFILLDTP*RDNSKFLLSLT
Trigger: TGTCAGGGAGAGAAGAAACTTAGAATTGTCCCTCAAAGGAGTGTCAAGAAGTATGAATAAATGTCCTTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR TCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACATATGCTGTTCTATTCTaGCTGGGACACCAAGTTGAT +
Preference number: 4 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTYAVLF*LGHQVD
Trigger: ATCAACTTGGTGTCCCAGTCAGAATAGAACAGCATA...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACACATGGCCTCATATGCTaGCTTTATGTTGCTGTAATC +
Preference number: 4 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTHGLIC*LYVAVI
Trigger: GATTACAGCAACATAAAGGCAGCATATGAGGCCATG...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR GCA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGTTATTGCTAAGGTGTaGAGGAAAAGCATATTAAGT +
Preference number: 4 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRVIAKV*RKSILS
Trigger: ACTTAATATGCTTTTCCTGCACACCTTAGCAATAAC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CCA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAATTGTACACTATACTTTaGCTGTCAACAGCAAATTCC +
Preference number: 4 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKLYTIL*LSTANS
Trigger: GGAATTTGCTGTTGACAGCCAAAGTATAGTGTACAA...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
3UTR CAA 72 bp TACATATCAAGTTACATCAATCTTGTACACTATACTTaGGCTGTCAACAGCAAATTCCTCAGTTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: YISSYINLVHYT*AVNSKFLSSEV
Trigger: GACTTCTGAACTGAGGAATTTGCTGTTGACAGCCAAAGTATAGTGTACAAGATTGATGTAACTTGATATGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS GCA 90 bp CGGAGCCCCGAGGTCGCCGCACTCTCGGAGGAGCCTGGGATCCAGTaGGCGCCCTCGGAGCTAGCGACCGGCAGGGCGATCGCGGGAGAA +
Preference number: 5 (lower is better)
Translates to: RSPEVAALSEEPGIQ*APSELATGRAIAGE
Trigger: TTCTCCCGCGATCGCCCTGCCGGTCGCTAGCTCCGAGGGCGCGCACTGGATCCCAGGCTCCTCCGAGAGTGCGGCGACCTCGGGGCTCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000466831.2
CDS GCA 90 bp AAGTCAGCGTGTCCAACACGTCCCTGCCCTCAGAGCCACCTCCGGTaGCGGCGGAGCCCCGAGGTCGCCGCACTCTCGGAGGAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: KSACPTRPCPQSHLR*RRSPEVAALSEEPG
Trigger: CCCAGGCTCCTCCGAGAGTGCGGCGACCTCGGGGCTCCGCCGGCACCGGAGGTGGCTCTGAGGGCAGGGACGTGTTGGACACGCTGACTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000466831.2
CDS GCA 90 bp TGGCCCGAGGCCGTTTGGGGCAGTGGTCATGTTCTCCAGGCAGGGTaGCCAGGGCCGCACGGCAGCCTGGGTCATGGCCACGGGCACTGC +
Preference number: 5 (lower is better)
Translates to: WPEAVWGSGHVLQAG*PGPHGSLGHGHGHC
Trigger: GCAGTGCCCGTGGCCATGACCCAGGCTGCCGTGCGGCCCTGGGCACCCTGCCTGGAGAACATGACCACTGCCCCAAACGGCCTCGGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp GTGGTCATGTTCTCCAGGCAGGGTGCCCAGGGCCGCACGGCAGCCTaGGTCATGGCCACGGGCACTGCCGAGTCCGCAGACCGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VVMFSRQGAQGRTAA*VMATGTAESADRSS
Trigger: GGAGCTGCGGTCTGCGGACTCGGCAGTGCCCGTGGCCATGACCCAGGCTGCCGTGCGGCCCTGGGCACCCTGCCTGGAGAACATGACCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 90 bp TCTGGGGCGCATCCAGCAGGCAGATGCGGCCCAGGCCGTAGGCTCTaGGGAGGCTGCGGGAGCGGTGTGTGCTCCGCTGGAAGGCATCGT +
Preference number: 5 (lower is better)
Translates to: SGAHPAGRCGPGRRL*GGCGSGVCSAGRHR
Trigger: ACGATGCCTTCCAGCGGAGCACACACCGCTCCCGCAGCCTCCGCAGAGCCTACGGCCTGGGCCGCATCTGCCTGCTGGATGCGCCCCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 90 bp CATCCAGCAGGCAGATGCGGCCCAGGCCGTAGGCTCTGCGGAGGCTaGGGGAGCGGTGTGTGCTCCGCTGGAAGGCATCGTCCGTGTCCT +
Preference number: 5 (lower is better)
Translates to: HPAGRCGPGRRLCGG*GSGVCSAGRHRPCP
Trigger: AGGACACGGACGATGCCTTCCAGCGGAGCACACACCGCTCCCGCAGCCTCCGCAGAGCCTACGGCCTGGGCCGCATCTGCCTGCTGGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 90 bp GCTCCAGGCCTTCATCTCCAGGAATGCCGTCCTGGCACTCACACCTaGCTTGCACATCGGGCTCCTGGGTGGCCACGGGCTCCTGCGGCG +
Preference number: 5 (lower is better)
Translates to: APGLHLQECRPGTHT*LAHRAPGWPRAPAA
Trigger: CGCCGCAGGAGCCCGTGGCCACCCAGGAGCCCGATGTGCAAGGCAGGTGTGAGTGCCAGGACGGCATTCCTGGAGATGAAGGCCTGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000466831.2
CDS CCA 90 bp CGTCCTGGGGCTGCTGGCTCTGAGCACGGCTCCTCCCGTCCATCCTaGCTGACACCTGCCGATCCATCCTGGGCCCTCTCCTCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: RPGAAGSEHGSSRPS*LTPADPSWALSSAL
Trigger: CAGAGCAGAGGAGAGGGCCCAGGATGGATCGGCAGGTGTCAGCCAGGATGGACGGGAGGAGCCGTGCTCAGAGCCAGCAGCCCCAGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488060.1
CDS GCA 90 bp GCTCCCTTCCCGCAGGAGGGTCGCCCACATGAGGGACCTCGCCGCTaGCCTTACCTCCTCCTTCTCCTTTTCTTCTGGGCCGGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: APFPQEGRPHEGPRR*PYLLLLLFFWAGCH
Trigger: GTGGCAGCCGGCCCAGAAGAAAAGGAGAAGGAGGAGGTAAGGGCAGCGGCGAGGTCCCTCATGTGGGCGACCCTCCTGCGGGAAGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466831.2
CDS CCA 90 bp GCGAGGGTGTTCCATGTGGAGGAGTTCCCCACCAGGACCATGGAGTaGGGCCGCTCGGGGTGGGCACCCGTCCTCTTCCGACTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: ARVFHVEEFPTRTME*GRSGWAPVLFRLVE
Trigger: TTCCACCAGTCGGAAGAGGACGGGTGCCCACCCCGAGCGGCCCCACTCCATGGTCCTGGTGGGGAACTCCTCCACATGGAACACCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp CAGCCGGCTGTGTGCCTGAAGTCTCAGGCTGGCCTCTCCAGGGGATaGGGCCCCACTCCTAGGACTCTCCCTCCTCCAGGCAGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: QPAVCLKSQAGLSRG*GPTPRTLPPPGSLS
Trigger: ACTGAGGCTGCCTGGAGGAGGGAGAGTCCTAGGAGTGGGGCCCCATCCCCTGGAGAGGCCAGCCTGAGACTTCAGGCACACAGCCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp GGAGAATGTGAAGGGCCGGAACCGGGCCGACACAGCCTTGTAGGGTaGCACCTGGTGAGCAGGCATGGGCGGCCTGGAAGCCGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: GECEGPEPGRHSLVG*HLVSRHGRPGSRLG
Trigger: ACCCAACCGGCTTCCAGGCCGCCCATGCCTGCTCACCAGGTGCCACCCTACAAGGCTGTGTCGGCCCGGTTCCGGCCCTTCACATTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS CCA 90 bp GGAGAATGTGAAGGGCCGGAACCGGGCCGACACAGCCTTGTAGGGTaGCACCTGGTGAGCAGGCATGGGCGGCCTGGAAGCCGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: GECEGPEPGRHSLVG*HLVSRHGRPGSRLQ
Trigger: TTGCAGCCGGCTTCCAGGCCGCCCATGCCTGCTCACCAGGTGCCACCCTACAAGGCTGTGTCGGCCCGGTTCCGGCCCTTCACATTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434675.5
CDS TCA 90 bp GGCGTCCCACACGGTCCAACCCAATGGGGGTGCTCTGGGAGAATGTaGAGGGCCGGAACCGGGCCGACACAGCCTTGTAGGGTGGCACCT +
Preference number: 5 (lower is better)
Translates to: GVPHGPTQWGCSGRM*RAGTGPTQPCRVAP
Trigger: AGGTGCCACCCTACAAGGCTGTGTCGGCCCGGTTCCGGCCCTTCACATTCTCCCAGAGCACCCCCATTGGGTTGGACCGTGTGGGACGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
ENST00000494772.5
CDS TCA 90 bp CTTCTGTTCCTAGCCAGGAGCTGCTCGTCCTGGGGCTGCTGGCTCTaGGCACGGCTCCTCCCGTCCATCCTGGCTGACACCTGCCGATCC +
Preference number: 5 (lower is better)
Translates to: LLFLARSCSSWGCWL*ARLLPSILADTCRS
Trigger: GGATCGGCAGGTGTCAGCCAGGATGGACGGGAGGAGCCGTGCTCAGAGCCAGCAGCCCCAGGACGAGCAGCTCCTGGCTAGGAACAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488060.1
CDS CCA 90 bp GCACCACATGCTGGTCCCGGTGCTAAGGGGGAGCCCCTGCTTGCCTaGGCTCCTGGGACAGCGCCATTTGGGATGGACTTTCCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: APHAGPGAKGEPLLA*APGTAPFGMDFPRP
Trigger: TGGCCTGGGAAAGTCCATCCCAAATGGCGCTGTCCCAGGAGCCCAGGCAAGCAGGGGCTCCCCCTTAGCACCGGGACCAGCATGTGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp CAGGGTCCCTCACGAGAATCTCACACACGGCGGGCACCTGGCCAGTaGCTATCGTGGGTGTCGCATGGTTCTGGGGCGCATCCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: QGPSRESHTRRAPGQ*LSWVSHGSGAHPAG
Trigger: GCCTGCTGGATGCGCCCCAGAACCATGCGACACCCACGATAGCCACTGGCCAGGTGCCCGCCGTGTGTGAGATTCTCGTGAGGGACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp ACTGCGGCTGGCCAGCTGGCCGTAGTCAGAGAATGGCCGAGGCCTTaGCCGTCTCCCAGAGCCCCATCTCCTCTTGGGGGTTCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: TAAGQLAVVREWPRP*PSPRAPSPLGGSLC
Trigger: GCACAGAGAACCCCCAAGAGGAGATGGGGCTCTGGGAGACGGCCAAGGCCTCGGCCATTCTCTGACTACGGCCAGCTGGCCAGCCGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000474317.1
CDS GCA 90 bp GCTCCAGGCCTTCATCTCCAGGAATGCCGTCCTGGCACTCACACCTaGCTTGCACATCGGGCTCCTGGGTGGCCACGGGCGAGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: APGLHLQECRPGTHT*LAHRAPGWPRASFC
Trigger: GCAGAAACTCGCCCGTGGCCACCCAGGAGCCCGATGTGCAAGGCAGGTGTGAGTGCCAGGACGGCATTCCTGGAGATGAAGGCCTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS CCA 90 bp TCACGAGAATCTCACACACGGCGGGCACCTGGCCAGTGGCTATCGTaGGTGTCGCATGGTTCTGGGGCGCATCCAGCAGGCAGATGCGGC +
Preference number: 5 (lower is better)
Translates to: SRESHTRRAPGQWLS*VSHGSGAHPAGRCG
Trigger: GCCGCATCTGCCTGCTGGATGCGCCCCAGAACCATGCGACACCCACGATAGCCACTGGCCAGGTGCCCGCCGTGTGTGAGATTCTCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp TGCAGCCACAGACTCCATTTCCACACGCAAGGGAGGTCACCATCTTaGCGTCTTTCAGGTCCGAGCCTGCACAGGGGGCTGCGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: CSHRLHFHTQGRSPS*RLSGPSLHRGLRGL
Trigger: CAGGCCCCGCAGCCCCCTGTGCAGGCTCGGACCTGAAAGACGCCAAGATGGTGACCTCCCTTGCGTGTGGAAATGGAGTCTGTGGCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp GGGAGCCCCTGCTTGCCTGGGCTCCTGGGACAGCGCCATTTGGGATaGACTTTCCCAGGCCATGCTCCGAAGCCTCTCCCTTTGAACAGG +
Preference number: 5 (lower is better)
Translates to: GSPCLPGLLGQRHLG*TFPGHAPKPLPLNR
Trigger: CCTGTTCAAAGGGAGAGGCTTCGGAGCATGGCCTGGGAAAGTCCATCCCAAATGGCGCTGTCCCAGGAGCCCAGGCAAGCAGGGGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS-3UTR CAA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTCCCTGCTTCATGAGGTaGGCGAGCTCCAGGCAGGCG +
Preference number: 5 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPPCFMR*ASSRQA
Trigger: CGCCTGCCTGGAGCTCGCCAACCTCATGAAGCAGGG...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS TCA 90 bp ACACCAGGTCCCCACTGCAGGCTGGGCAAGGATCCACAACCTTCGTaGGCCCCCTTGAAGCTGAGGACTGGAATGGCTGCTGTGTGCCCG +
Preference number: 5 (lower is better)
Translates to: TPGPHCRLGKDPQPS*APLKLRTGMAAVCP
Trigger: CGGGCACACAGCAGCCATTCCAGTCCTCAGCTTCAAGGGGGCTCACGAAGGTTGTGGATCCTTGCCCAGCCTGCAGTGGGGACCTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS GCA 90 bp CAGAAGAGCGAGGACTTCCTCTTGGGTTCCGCCAGGCCAAAGACCTaGTGCTGGGGGACGCTTGTGGGCATAGTGATGTGGCGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: QKSEDFLLGSARPKT*CWGTLVGIVMWRWW
Trigger: CCACCAGCGCCACATCACTATGCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGCTCTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS GCA 90 bp GCCCACTGGAGCATTCTGGTCTTCAGGGCTGGCAGAAGTCATGCTTaGCTGGGGGTCCTCGTCCACACGGTCTTCCTTCTGGGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: AHWSILVFRAGRSHA*LGVLVHTVFLLGVC
Trigger: GCAGACCCCCAGAAGGAAGACCGTGTGGACGAGGACCCCCAGGCAAGCATGACTTCTGCCAGCCCTGAAGACCAGAATGCTCCAGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS GCA 90 bp GGCAGCCCACTGGAGCATTCTGGTCTTCAGGGCTGGCAGAAGTCATaGTTGCCTGGGGGTCCTCGTCCACACGGTCTTCCTTCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: GSPLEHSGLQGWQKS*LPGGPRPHGLPSGG
Trigger: ACCCCCAGAAGGAAGACCGTGTGGACGAGGACCCCCAGGCAAGCATGACTTCTGCCAGCCCTGAAGACCAGAATGCTCCAGTGGGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS GCA 90 bp GCTCTCTGGGCTGGTGTCTCGTCAGCCCTCCCAGTTTCTGACGGCTaGCCAACTGGCTGGACAGACCTGAGCAATCACCCATCCGGCTTC +
Preference number: 5 (lower is better)
Translates to: ALWAGVSSALPVSDG*PTGWTDLSNHPSGF
Trigger: GAAGCCGGATGGGTGATTGCTCAGGTCTGTCCAGCCAGTTGGGCAGCCGTCAGAAACTGGGAGGGCTGACGAGACACCAGCCCAGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488060.1
CDS CCA 90 bp ACCCGTCCTCTTCCGACTGGTGGAAAAGAGGCGCACAAGCTTGGCTaGGCTGAGTTTGGCTTCCTGGGTGTCCGTGTCGCCACCAGGGCT +
Preference number: 5 (lower is better)
Translates to: TRPLPTGGKEAHKLG*AEFGFLGVRVATRA
Trigger: AGCCCTGGTGGCGACACGGACACCCAGGAAGCCAAACTCAGCCCAGCCAAGCTTGTGCGCCTCTTTTCCACCAGTCGGAAGAGGACGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp GGGCTCCTTTGGGGCAGCCCACTGGAGCATTCTGGTCTTCAGGGCTaGCAGAAGTCATGCTTGCCTGGGGGTCCTCGTCCACACGGTCTT +
Preference number: 5 (lower is better)
Translates to: GLLWGSPLEHSGLQG*QKSCLPGGPRPHGL
Trigger: AAGACCGTGTGGACGAGGACCCCCAGGCAAGCATGACTTCTGCCAGCCCTGAAGACCAGAATGCTCCAGTGGGCTGCCCCAAAGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACTCCTGTGTGGTATACTaGAGCAGCTCGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHSCVVY*SSSASC
Trigger: GCAGCTGGCCGAGCTGCTCAAGTATACCACACAGGA...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCCTGAGGTTGCAGTCCTaGTCGCGCCCATCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSLRLQS*SRPSPR
Trigger: CCTGGGGGATGGGCGCGACAAGGACTGCAACCTCAG...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACAAGGGGGTGAGCCTGTaGAAGGTGTGCCAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHKGVSL*KVCQKS
Trigger: GCTCTTCTGGCACACCTTCAACAGGCTCACCCCCTT...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACCCCTGGATGCTGTGTTaGGACCTGCAGCAGGCACTT +
Preference number: 5 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHPWMLC*DLQQAL
Trigger: AAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGGG...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAAGAATGGCCGAGGCCTaGGCCGTCTCCCAGAGCCCC +
Preference number: 5 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASRMAEA*AVSQSP
Trigger: GGGGCTCTGGGAGACGGCCAAGGCCTCGGCCATTCT...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS TCA 90 bp CCTGACAGCTCTCTGGGCTGGTGTCTCGTCAGCCCTCCCAGTTTCTaGCGGCTGCCCAACTGGCTGGACAGACCTGAGCAATCACCCATC +
Preference number: 5 (lower is better)
Translates to: PDSSLGWCLVSPPSF*RLPNWLDRPEQSPI
Trigger: GATGGGTGATTGCTCAGGTCTGTCCAGCCAGTTGGGCAGCCGTCAGAAACTGGGAGGGCTGACGAGACACCAGCCCAGAGAGCTGTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488060.1
CDS GCA 90 bp TGCTGCAGCAGGCGGCAGGCTTCAAAGAAATGTCTGTACTTGCCCTaGTTCATGAGGTTGGCGAGCTCCAGGCAGGCGCCCGGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: CCSRRQASKKCLYLP*FMRLASSRQAPGWL
Trigger: CAACCACCCGGGCGCCTGCCTGGAGCTCGCCAACCTCATGAAGCAGGGCAAGTACAGACATTTCTTTGAAGCCTGCCGCCTGCTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS GCA 90 bp AAGAGCGAGGACTTCCTCTTGGGTTCCGCCAGGCCAAAGACCTGCTaGTGGGGGACGCTTGTGGGCATAGTGATGTGGCGCTGGTGGATG +
Preference number: 5 (lower is better)
Translates to: KSEDFLLGSARPKTC*WGTLVGIVMWRWWM
Trigger: CATCCACCAGCGCCACATCACTATGCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS GCA 90 bp GCTTGCCTGGGGGTCCTCGTCCACACGGTCTTCCTTCTGGGGGTCTaGAGCAACCGAGTCTTCAGGAATAGACAAACTGCGGCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: ACLGVLVHTVFLLGV*SNRVFRNRQTAAGQ
Trigger: CTGGCCAGCCGCAGTTTGTCTATTCCTGAAGACTCGGTTGCTGCAGACCCCCAGAAGGAAGACCGTGTGGACGAGGACCCCCAGGCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS CCA 90 bp TTGTTTTCAGGGTCCCTCACGAGAATCTCACACACGGCGGGCACCTaGCCAGTGGCTATCGTGGGTGTCGCATGGTTCTGGGGCGCATCC +
Preference number: 5 (lower is better)
Translates to: LFSGSLTRISHTAGT*PVAIVGVAWFWGAS
Trigger: GGATGCGCCCCAGAACCATGCGACACCCACGATAGCCACTGGCCAGGTGCCCGCCGTGTGTGAGATTCTCGTGAGGGACCCTGAAAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp GAGGGACCTCGCCGCTGCCCTTACCTCCTCCTTCTCCTTTTCTTCTaGGCCGGCTGCCACACCAATGTTCACCAGAAGGTCCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: EGPRRCPYLLLLLFF*AGCHTNVHQKVLAA
Trigger: GGCAGCAAGGACCTTCTGGTGAACATTGGTGTGGCAGCCGGCCCAGAAGAAAAGGAGAAGGAGGAGGTAAGGGCAGCGGCGAGGTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466831.2
CDS-3UTR CAA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTCTGAGGTTGCAGTCCTaGTCGCGCCCATCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVALRLQS*SRPSPR
Trigger: CCTGGGGGATGGGCGCGACAAGGACTGCAACCTCAG...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCACTGAGGTTGCAGTCCTaGTCGCGCCCATCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASLRLQS*SRPSPR
Trigger: CCTGGGGGATGGGCGCGACAAGGACTGCAACCTCAG...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTAGCGAGGACTTCCTCTaGGGTTCCGCCAGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: RAGRRESDSGTKPVCSRISEDFL*GSARPK
Trigger: CTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGCT...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTAGGGCACTGAGCGGGTaGAAAGGGCACCTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIRALSG*KGHLSC
Trigger: GCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCT...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCTGGCAGAAGTCATGCTaGCCTGGGGGTCCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAWQKSC*PGGPRP
Trigger: TGGACGAGGACCCCCAGGCAAGCATGACTTCTGCCA...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCGGCCTGGAAGCCGGTaGGGTCAGAAGATTGTCCAG +
Preference number: 5 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCRPGSR*GQKIVQ
Trigger: CTGGACAATCTTCTGACCCAACCGGCTTCCAGGCCG...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS TCA 90 bp CAGCCCTCCCAGTTTCTGACGGCTGCCCAACTGGCTGGACAGACCTaGGCAATCACCCATCCGGCTTCCTGGCATCTTAATGTGCGCCAG +
Preference number: 5 (lower is better)
Translates to: QPSQFLTAAQLAGQT*AITHPASWHLNVRQ
Trigger: CTGGCGCACATTAAGATGCCAGGAAGCCGGATGGGTGATTGCTCAGGTCTGTCCAGCCAGTTGGGCAGCCGTCAGAAACTGGGAGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488060.1
CDS GCA 90 bp TGGGCTCCTGGGACAGCGCCATTTGGGATGGACTTTCCCAGGCCATaGTCCGAAGCCTCTCCCTTTGAACAGGCATTTGACCCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: WAPGTAPFGMDFPRP*SEASPFEQAFDPSR
Trigger: CCGAGAGGGGTCAAATGCCTGTTCAAAGGGAGAGGCTTCGGAGCATGGCCTGGGAAAGTCCATCCCAAATGGCGCTGTCCCAGGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 90 bp CGCCGCTGCCCTTACCTCCTCCTTCTCCTTTTCTTCTGGGCCGGCTaGCACACCAATGTTCACCAGAAGGTCCTTGCTGCCCTCATCACC +
Preference number: 5 (lower is better)
Translates to: RRCPYLLLLLFFWAG*HTNVHQKVLAALIT
Trigger: GGTGATGAGGGCAGCAAGGACCTTCTGGTGAACATTGGTGTGGCAGCCGGCCCAGAAGAAAAGGAGAAGGAGGAGGTAAGGGCAGCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466831.2
CDS CCA 90 bp GTGGAAAAGAGGCGCACAAGCTTGGCTGGGCTGAGTTTGGCTTCCTaGGTGTCCGTGTCGCCACCAGGGCTGCAGCCACAGACTCCATTT +
Preference number: 5 (lower is better)
Translates to: VEKRRTSLAGLSLAS*VSVSPPGLQPQTPF
Trigger: AAATGGAGTCTGTGGCTGCAGCCCTGGTGGCGACACGGACACCCAGGAAGCCAAACTCAGCCCAGCCAAGCTTGTGCGCCTCTTTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp ACTGGAGCATTCTGGTCTTCAGGGCTGGCAGAAGTCATGCTTGCCTaGGGGTCCTCGTCCACACGGTCTTCCTTCTGGGGGTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: TGAFWSSGLAEVMLA*GSSSTRSSFWGSAA
Trigger: TGCTGCAGACCCCCAGAAGGAAGACCGTGTGGACGAGGACCCCCAGGCAAGCATGACTTCTGCCAGCCCTGAAGACCAGAATGCTCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS CCA 90 bp GGGCAAGGATCCACAACCTTCGTGAGCCCCCTTGAAGCTGAGGACTaGAATGGCTGCTGTGTGCCCGGGTTCTCCTCAGGGTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: GQGSTTFVSPLEAED*NGCCVPGFSSGSSS
Trigger: GGAAGAAGACCCTGAGGAGAACCCGGGCACACAGCAGCCATTCCAGTCCTCAGCTTCAAGGGGGCTCACGAAGGTTGTGGATCCTTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS-3UTR CAA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTCCTGTGTGGTATACTaGAGCAGCTCGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPSCVVY*SSSASC
Trigger: GCAGCTGGCCGAGCTGCTCAAGTATACCACACAGGA...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTCTCTCCAGCTTGCGCTaGCGCTCGTTGATCAGACAG +
Preference number: 5 (lower is better)
Translates to: RAGRRESDSGTKPVCSRILSSLR*RSLIRQ
Trigger: CTGTCTGATCAACGAGCGCAAGCGCAAGCTGGAGAG...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTCTCCAGCTTGCGCTaGCGCTCGTTGATCAGACAG +
Preference number: 5 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCLSSLR*RSLIRQ
Trigger: CTGTCTGATCAACGAGCGCAAGCGCAAGCTGGAGAG...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCGATGCTCTCCAGCTaGCGCTTGCGCTCGTTGATC +
Preference number: 5 (lower is better)
Translates to: RAGRRESDSGTKPVCSRISMLSS*RLRSLI
Trigger: GATCAACGAGCGCAAGCGCAAGCTGGAGAGCATCGA...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTCGATGCTCTCCAGCTaGCGCTTGCGCTCGTTGATC +
Preference number: 5 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPSMLSS*RLRSLI
Trigger: GATCAACGAGCGCAAGCGCAAGCTGGAGAGCATCGA...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCCATTCCCATCTCCTaGTCCTCTTGCACCCGCCTC +
Preference number: 5 (lower is better)
Translates to: RAGRRESDSGTKPVCSRISIPIS*SSCTRL
Trigger: GAGGCGGGTGCAAGAGGACAAGGAGATGGGAATGGA...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTAGCGAGGACTTCCTCTaGGGTTCCGCCAGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPSEDFL*GSARPK
Trigger: CTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGCT...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTAAGGGGGTGAGCCTGTaGAAGGTGTGCCAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIKGVSL*KVCQKS
Trigger: GCTCTTCTGGCACACCTTCAACAGGCTCACCCCCTT...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTCCCTGGATGCTGTGTTaGGACCTGCAGCAGGCACTT +
Preference number: 5 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPPWMLC*DLQQAL
Trigger: AAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGGG...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACCCACAGCACCCAGCCTaGCATAGCAGTTTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHPQHPA*HSSFLG
Trigger: ACCTAAGAAACTGCTATGCAAGGCTGGGTGCTGTGG...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTGAGCAGTGCGGCTCTTaGAGAGTGCCTTCTGACCAG +
Preference number: 5 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIEQCGS*RVPSDQ
Trigger: CTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCTC...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACTTCACCAGAAGGTCCTaGCTGCCCTCATCACCATGT +
Preference number: 5 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHFTRRS*LPSSPC
Trigger: ACATGGTGATGAGGGCAGCAAGGACCTTCTGGTGAA...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGCTTCTCCGGGCTCCTTaGGGGCAGCCCACTGGAGCA +
Preference number: 5 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKLLRAP*GQPTGA
Trigger: TGCTCCAGTGGGCTGCCCCAAAGGAGCCCGGAGAAG...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS GCA 90 bp CTTCTGGGCCGGCTGCCACACCAATGTTCACCAGAAGGTCCTTGCTaGCCTCATCACCATGTGTGGCTTCCAGGGGATCCTGCAAGGACA +
Preference number: 5 (lower is better)
Translates to: LLGRLPHQCSPEGPC*PHHHVWLPGDPART
Trigger: TGTCCTTGCAGGATCCCCTGGAAGCCACACATGGTGATGAGGGCAGCAAGGACCTTCTGGTGAACATTGGTGTGGCAGCCGGCCCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
ENST00000474317.1
CDS GCA 90 bp GCCATCAGGGACGACCTCCTCCTTCTCCTTTTCTTCTGGGCCGGCTaGCACACCAATGTTCACCAGAAGGTCCTTGCTGCCCTCATCACC +
Preference number: 5 (lower is better)
Translates to: AIRDDLLLLLFFWAG*HTNVHQKVLAALIT
Trigger: GGTGATGAGGGCAGCAAGGACCTTCTGGTGAACATTGGTGTGGCAGCCGGCCCAGAAGAAAAGGAGAAGGAGGAGGTCGTCCCTGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000474317.1
CDS CCA 90 bp TCAGTGGAGGAACTGCTCAGGGTCCTCTGTGGTACCCGTGCGTCATaGGCCGTCCTGAGGTCTGCAAGATTGGAGGTGGACTTCCGCTTA +
Preference number: 5 (lower is better)
Translates to: SVEELLRVLCGTRAS*AVLRSARLEVDFRL
Trigger: TAAGCGGAAGTCCACCTCCAATCTTGCAGACCTCAGGACGGCCCATGACGCACGGGTACCACAGAGGACCCTGAGCAGTTCCTCCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp TCCTCCAGCGTTTGGTCCTTCCTGACCCAAGCTTTTGGGAGTCAGTaGAGGAACTGCTCAGGGTCCTCTGTGGTACCCGTGCGTCATGGG +
Preference number: 5 (lower is better)
Translates to: SSSVWSFLTQAFGSQ*RNCSGSSVVPVRHG
Trigger: CCCATGACGCACGGGTACCACAGAGGACCCTGAGCAGTTCCTCCACTGACTCCCAAAAGCTTGGGTCAGGAAGGACCAAACGCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS-3UTR CAA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCTCCTGTGTGGTATACTaGAGCAGCTCGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSSCVVY*SSSASC
Trigger: GCAGCTGGCCGAGCTGCTCAAGTATACCACACAGGA...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTTGCGCTTGCGCTCGTaGATCAGACAGGCCACATTC +
Preference number: 5 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPLRLRS*IRQATF
Trigger: GAATGTGGCCTGTCTGATCAACGAGCGCAAGCGCAA...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCTGCCAGCGAGCTATCTaGTCGATGCTCTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCCQRAI*SMLSSL
Trigger: CAAGCTGGAGAGCATCGACAAGATAGCTCGCTGGCA...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTGCCAGCGAGCTATCTaGTCGATGCTCTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPCQRAI*SMLSSL
Trigger: CAAGCTGGAGAGCATCGACAAGATAGCTCGCTGGCA...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTGAGCAGTGCGGCTCTTaGAGAGTGCCTTCTGACCAG +
Preference number: 5 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPEQCGS*RVPSDQ
Trigger: CTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCTC...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCTCCTGCGGCGCCTCTaGGCGGAGCCTACAAAGTCA +
Preference number: 5 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGLLRRL*AEPTKS
Trigger: TGACTTTGTAGGCTCCGCCAAGAGGCGCCGCAGGAG...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382095.8
ENST00000382108.8
CDS-3UTR CAA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTAAGAGGCGCACAAGCTaGGCTGGGCTGAGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPKRRTS*AGLSLA
Trigger: AGCCAAACTCAGCCCAGCCAAGCTTGTGCGCCTCTT...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCCTTCTCCGGGCTCCTTaGGGGCAGCCCACTGGAGCA +
Preference number: 5 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSLLRAP*GQPTGA
Trigger: TGCTCCAGTGGGCTGCCCCAAAGGAGCCCGGAGAAG...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCGGTTGGGTCAGAAGATaGTCCAGTTCCTCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAGWVRR*SSSSVW
Trigger: CCAGACGGAGGAACTGGACAATCTTCTGACCCAACC...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS TCA 90 bp CAATCACTCCTAGGACTCTGCCTCTCAGCCCCTGCTGCTGTGCTGTaGAAATCCCAGGCCATACAAGCAGCCACGTGTAGGTGCCGTACC +
Preference number: 5 (lower is better)
Translates to: QSLLGLCLSAPAAVL*KSQAIQAATCRCRT
Trigger: GGTACGGCACCTACACGTGGCTGCTTGTATGGCCTGGGATTTTCACAGCACAGCAGCAGGGGCTGAGAGGCAGAGTCCTAGGAGTGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS GCA 90 bp GCCTCCTGTTTTCATTTCCGGAAGGGGGTGAGCCTGTTGAAGGTGTaGCAGAAGAGCGAGGACTTCCTCTTGGGTTCCGCCAGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: ASCFHFRKGVSLLKV*QKSEDFLLGSARPK
Trigger: CTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGCTCTTCTGGCACACCTTCAACAGGCTCACCCCCTTCCGGAAATGAAAACAGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS GCA 90 bp TTTCTTCTGGGCCGGCTGCCACACCAATGTTCACCAGAAGGTCCTTaGTGCCCTCATCACCATGTGTGGCTTCCAGGGGATCCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: FLLGRLPHQCSPEGP*CPHHHVWLPGDPAR
Trigger: CCTTGCAGGATCCCCTGGAAGCCACACATGGTGATGAGGGCAGCAAGGACCTTCTGGTGAACATTGGTGTGGCAGCCGGCCCAGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
ENST00000474317.1
CDS CCA 90 bp GCTACCATCCTTCTGTTTGGAAAACGGCAACCTTCAGAGCAGGACTaGGGTGTGACCGAGGAGCCGGTCCCCAAGCATCACAGAGGACTG +
Preference number: 5 (lower is better)
Translates to: ATILLFGKRQPSEQD*GVTEEPVPKHHRGL
Trigger: CAGTCCTCTGTGATGCTTGGGGACCGGCTCCTCGGTCACACCCCAGTCCTGCTCTGAAGGTTGCCGTTTTCCAAACAGAAGGATGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS CCA 90 bp GTGGGCCTTAGAGGGGTGGGAGGCTGCTCAGGGTCAAATGTCAACTaGCTGCCAGCGTTTGGGTCACAGGAGTCTTTGCTCAACACATCC +
Preference number: 5 (lower is better)
Translates to: VGLRGVGGCSGSNVN*LPAFGSQESLLNTS
Trigger: GGATGTGTTGAGCAAAGACTCCTGTGACCCAAACGCTGGCAGCCAGTTGACATTTGACCCTGAGCAGCCTCCCACCCCTCTAAGGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp CACCAATGTTCACCAGAAGGTCCTTGCTGCCCTCATCACCATGTGTaGCTTCCAGGGGATCCTGCAAGGACACAGGCCCTGGCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: HQCSPEGPCCPHHHV*LPGDPARTQALALS
Trigger: AGAGAGAGCCAGGGCCTGTGTCCTTGCAGGATCCCCTGGAAGCCACACATGGTGATGAGGGCAGCAAGGACCTTCTGGTGAACATTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
ENST00000474317.1
CDS CCA 90 bp GAAGTCATGCTTGCCTGGGGGTCCTCGTCCACACGGTCTTCCTTCTaGGGGTCTGCAGCAACCGAGTCTTCAGGAATAGACAAACTGCGG +
Preference number: 5 (lower is better)
Translates to: EVMLAWGSSSTRSSF*GSAATESSGIDKLR
Trigger: CCGCAGTTTGTCTATTCCTGAAGACTCGGTTGCTGCAGACCCCCAGAAGGAAGACCGTGTGGACGAGGACCCCCAGGCAAGCATGACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCTTCACTGCTTTGACGTaGTATGCGTTCCCGGCCAGA +
Preference number: 5 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCFTALT*YAFPAR
Trigger: TCTGGCCGGGAACGCATACAACGTCAAAGCAGTGAA...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000399949.6
CDS-3UTR CAA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCTCCTCCTCACTACCGTaGTCATCCACTAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCSSSLP*SSTKAE
Trigger: CTCTGCCTTAGTGGATGACAACGGTAGTGAGGAGGA...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCATCACTGATCAGCTCATaGATGGCCAGCTGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASSLISS*MASCSP
Trigger: CGGGGAGCAGCTGGCCATCAATGAGCTGATCAGTGA...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCATCACTGATCAGCTCATaGATGGCCAGCTGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPSLISS*MASCSP
Trigger: CGGGGAGCAGCTGGCCATCAATGAGCTGATCAGTGA...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATACCCTGCTTCATGAGGTaGGCGAGCTCCAGGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIPCFMR*ASSRQA
Trigger: CGCCTGCCTGGAGCTCGCCAACCTCATGAAGCAGGG...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCCTGCTTCATGAGGTaGGCGAGCTCCAGGCAGGCG +
Preference number: 5 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSPCFMR*ASSRQA
Trigger: CGCCTGCCTGGAGCTCGCCAACCTCATGAAGCAGGG...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCTTGCGCTTGCGCTCGTaGATCAGACAGGCCACATTC +
Preference number: 5 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSLRLRS*IRQATF
Trigger: GAATGTGGCCTGTCTGATCAACGAGCGCAAGCGCAA...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCATCCATTCCCATCTCCTaGTCCTCTTGCACCCGCCTC +
Preference number: 5 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASSIPIS*SSCTRL
Trigger: GAGGCGGGTGCAAGAGGACAAGGAGATGGGAATGGA...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGAGCGAGGACTTCCTCTaGGGTTCCGCCAGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKSEDFL*GSARPK
Trigger: CTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGCT...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAAGCGAGGACTTCCTCTaGGGTTCCGCCAGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVSEDFL*GSARPK
Trigger: CTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGCT...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTACCTGCAGCAGGCACTaGCTCATCATCAGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVATCSRH*LIISRG
Trigger: ACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGT...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAACCTGCAGCAGGCACTaGCTCATCATCAGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRTCSRH*LIISRG
Trigger: ACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGT...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCACCCTGGATGCTGTGTTaGGACCTGCAGCAGGCACTT +
Preference number: 5 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASPWMLC*DLQQAL
Trigger: AAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGGG...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTTGAGGATGCGTAAGTaGCTCTGCACTGAGGACCCT +
Preference number: 5 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPLRMRK*LCTEDP
Trigger: AGGGTCCTCAGTGCAGAGCAACTTACGCATCCTCAA...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTGAGGTCTGCAAGATaGGAGGTGGACTTCCGCTTA +
Preference number: 5 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCLRSAR*EVDFRL
Trigger: TAAGCGGAAGTCCACCTCCAATCTTGCAGACCTCAG...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCGGGCTCCTCCAGCGTTaGGTCCTTCCTGACCCAAGC +
Preference number: 5 (lower is better)
Translates to: ARCDFCSELLKACRQEGIGLLQR*VLPDPS
Trigger: GCTTGGGTCAGGAAGGACCAAACGCTGGAGGAGCCC...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTGGGTCACAGGAGTCTTaGCTCAACACATCCTGGACA +
Preference number: 5 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIGSQES*LNTSWT
Trigger: TGTCCAGGATGTGTTGAGCAAAGACTCCTGTGACCC...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTCCATCTGAAGAAACGTaGGATGCTCTCATCTGCCGC +
Preference number: 5 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIPSEET*DALICR
Trigger: GCGGCAGATGAGAGCATCCAACGTTTCTTCAGATGG...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS TCA 90 bp AAAGTCCTTGGCCCTTATCGGGCTCCTCCAGCGTTTGGTCCTTCCTaGCCCAAGCTTTTGGGAGTCAGTGGAGGAACTGCTCAGGGTCCT +
Preference number: 5 (lower is better)
Translates to: KVLGPYRAPPAFGPS*PKLLGVSGGTAQGP
Trigger: AGGACCCTGAGCAGTTCCTCCACTGACTCCCAAAAGCTTGGGTCAGGAAGGACCAAACGCTGGAGGAGCCCGATAAGGGCCAAGGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 90 bp GCCTTAGAGGGGTGGGAGGCTGCTCAGGGTCAAATGTCAACTGGCTaGCAGCGTTTGGGTCACAGGAGTCTTTGCTCAACACATCCTGGA +
Preference number: 5 (lower is better)
Translates to: ALEGWEAAQGQMSTG*QRLGHRSLCSTHPG
Trigger: TCCAGGATGTGTTGAGCAAAGACTCCTGTGACCCAAACGCTGGCAGCCAGTTGACATTTGACCCTGAGCAGCCTCCCACCCCTCTAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp GGTGGGAGGCTGCTCAGGGTCAAATGTCAACTGGCTGCCAGCGTTTaGGTCACAGGAGTCTTTGCTCAACACATCCTGGACAATCGGGCT +
Preference number: 5 (lower is better)
Translates to: GGRLLRVKCQLAASV*VTGVFAQHILDNRA
Trigger: AGCCCGATTGTCCAGGATGTGTTGAGCAAAGACTCCTGTGACCCAAACGCTGGCAGCCAGTTGACATTTGACCCTGAGCAGCCTCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp CGTGTAGGTGCCGTACCCACTGGCAGCTATGGGATTGAGCTGTCATaGAGGCTTCCACCTGGTGAACCTCCCAATGACTGTGGTCCAAGT +
Preference number: 5 (lower is better)
Translates to: RVGAVPTGSYGIELS*RLPPGEPPNDCGPS
Trigger: ACTTGGACCACAGTCATTGGGAGGTTCACCAGGTGGAAGCCTCCATGACAGCTCAATCCCATAGCTGCCAGTGGGTACGGCACCTACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS-3UTR CAA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTTTCACTGCTTTGACGTaGTATGCGTTCCCGGCCAGA +
Preference number: 5 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPFTALT*YAFPAR
Trigger: TCTGGCCGGGAACGCATACAACGTCAAAGCAGTGAA...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000399949.6
CDS-3UTR CAA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATATCACTGATCAGCTCATaGATGGCCAGCTGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKISLISS*MASCSP
Trigger: CGGGGAGCAGCTGGCCATCAATGAGCTGATCAGTGA...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTATCACTGATCAGCTCATaGATGGCCAGCTGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVSLISS*MASCSP
Trigger: CGGGGAGCAGCTGGCCATCAATGAGCTGATCAGTGA...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAATGACATCCCCGGCTTaGAAGCCCAGTTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASMTSPA*KPSSWS
Trigger: TGACCAGGAACTGGGCTTCAAAGCCGGGGATGTCAT...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTACACCACCAGTCCTTGTaGGAGGCTTCCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVHHQSL*EASRTW
Trigger: CCAGGTTCTGGAAGCCTCCAACAAGGACTGGTGGTG...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGCACCACCAGTCCTTGTaGGAGGCTTCCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKHHQSL*EASRTW
Trigger: CCAGGTTCTGGAAGCCTCCAACAAGGACTGGTGGTG...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAGTCCGCATCTGCTGCTaGTTCTCACAGTGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPVRICC*FSQCLW
Trigger: CCACAGACACTGTGAGAACAAGCAGCAGATGCGGAC...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGTCCGCATCTGCTGCTaGTTCTCACAGTGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASVRICC*FSQCLW
Trigger: CCACAGACACTGTGAGAACAAGCAGCAGATGCGGAC...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCCCCTGCTTCATGAGGTaGGCGAGCTCCAGGCAGGCG +
Preference number: 5 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLPCFMR*ASSRQA
Trigger: CGCCTGCCTGGAGCTCGCCAACCTCATGAAGCAGGG...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTGTCCGCTGCTGGCTTTaGCCTTGCTTAGTGATTTTG +
Preference number: 5 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPVRCWL*PCLVIL
Trigger: CAAAATCACTAAGCAAGGCAAAAGCCAGCAGCGGAC...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTGTCCGCTGCTGGCTTTaGCCTTGCTTAGTGATTTTG +
Preference number: 5 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIVRCWL*PCLVIL
Trigger: CAAAATCACTAAGCAAGGCAAAAGCCAGCAGCGGAC...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCATTTTTCACGCTGAGGTaGCAGTCCTTGTCGCGCCCA +
Preference number: 5 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASFFTLR*QSLSRP
Trigger: TGGGCGCGACAAGGACTGCAACCTCAGCGTGAAAAA...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAACCTGCAGCAGGCACTaGCTCATCATCAGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKITCSRH*LIISRG
Trigger: ACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGT...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTTCTCTCCACTTTGCTaGCAGGAAGAGGAACCTTGC +
Preference number: 5 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPFSPLC*QEEEPC
Trigger: GCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGAA...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTTCTCTCCACTTTGCTaGCAGGAAGAGGAACCTTGC +
Preference number: 5 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIFSPLC*QEEEPC
Trigger: GCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGAA...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCTTCTCTCCACTTTGCTaGCAGGAAGAGGAACCTTGC +
Preference number: 5 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAFSPLC*QEEEPC
Trigger: GCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGAA...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACGTCTTTGTGACTTCATaGCTAAGGACGATGTCAGGA +
Preference number: 5 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHVFVTS*LRTMSG
Trigger: TCCTGACATCGTCCTTAGCAATGAAGTCACAAAGAC...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCTTTCACCTAGTTGACTaGGGTCCTCCATTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAFHLVD*GPPFLA
Trigger: GGCCAGAAATGGAGGACCCAAGTCAACTAGGTGAAA...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCTGGCCCGAGGCCGTTaGGGGCAGTGGTCATGTTCT +
Preference number: 5 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSLARGR*GQWSCS
Trigger: AGAACATGACCACTGCCCCAAACGGCCTCGGGCCAG...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAACTGGGACAGCGCCATTaGGGATGGACTTTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKLGQRH*GWTFPG
Trigger: GCCTGGGAAAGTCCATCCCAAATGGCGCTGTCCCAG...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGGGCTCCTCCAGCGTTaGGTCCTTCCTGACCCAAGC +
Preference number: 5 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIGLLQR*VLPDPS
Trigger: GCTTGGGTCAGGAAGGACCAAACGCTGGAGGAGCCC...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAACTCTGTCAAAGTCCTaGGCCCTTATCGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: AVFGPAAGTCSSSAGVASTLSKS*ALIGLL
Trigger: GAGGAGCCCGATAAGGGCCAAGGACTTTGACAGAGT...TGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTACCTGGACAATCGGGCTaGGCAAAGAGCTGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVPGQSG*AKSCKC
Trigger: GCACTTGCAGCTCTTTGCCAAGCCCGATTGTCCAGG...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCCTGGACAATCGGGCTaGGCAAAGAGCTGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGPGQSG*AKSCKC
Trigger: GCACTTGCAGCTCTTTGCCAAGCCCGATTGTCCAGG...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGCTTCTCCGGGCTCCTTaGGGGCAGCCCACTGGAGCA +
Preference number: 5 (lower is better)
Translates to: EAGESKIPNEIHTLSMEELLRAP*GQPTGA
Trigger: TGCTCCAGTGGGCTGCCCCAAAGGAGCCCGGAGAAG...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGCGGCCTGGAAGCCGGTaGGGTCAGAAGATTGTCCAG +
Preference number: 5 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKRPGSR*GQKIVQ
Trigger: CTGGACAATCTTCTGACCCAACCGGCTTCCAGGCCG...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTGTCCTCAGAGGGTCCTaGGAGGGATCCCAGCATCCC +
Preference number: 5 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSVLRGS*EGSQHP
Trigger: GGGATGCTGGGATCCCTCCAAGGACCCTCTGAGGAC...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS-3UTR CAA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGTGTGAGGCCTACGCTTaGCCATCTGCACGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKCEAYA*PSARCC
Trigger: GCAACACCGTGCAGATGGCAAAGCGTAGGCCTCACA...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS TCA 90 bp TGGCTCTCTCTGAGCAGGCTCTTCTGCCCTTCCTTCACTTTCCTCTaGATTCGCGGACAGGGCACTGTGATTGCTGTGACAGCTGGCACT +
Preference number: 5 (lower is better)
Translates to: WLSLSRLFCPSFTFL*IRGQGTVIAVTAGT
Trigger: AGTGCCAGCTGTCACAGCAATCACAGTGCCCTGTCCGCGAATTCAGAGGAAAGTGAAGGAAGGGCAGAAGAGCCTGCTCAGAGAGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
ENST00000474317.1
CDS CCA 90 bp AGCTGCAAGTGCAGGAACTGTCGCTTTCCACCGCCCAGGAACTTTTaGTTTCAAGAGGAAATACGGCAGTGTCAGCGTCTAGGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: SCKCRNCRFPPPRNF*FQEEIRQCQRLGGA
Trigger: GGCCCCACCTAGACGCTGACACTGCCGTATTTCCTCTTGAAACCAAAAGTTCCTGGGCGGTGGAAAGCGACAGTTCCTGCACTTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp TGGCTGCCAGCGTTTGGGTCACAGGAGTCTTTGCTCAACACATCCTaGACAATCGGGCTTGGCAAAGAGCTGCAAGTGCAGGAACTGTCG +
Preference number: 5 (lower is better)
Translates to: WLPAFGSQESLLNTS*TIGLGKELQVQELS
Trigger: CGACAGTTCCTGCACTTGCAGCTCTTTGCCAAGCCCGATTGTCCAGGATGTGTTGAGCAAAGACTCCTGTGACCCAAACGCTGGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp TGCCTTCTTCTTTTCTGTCACATGACGGAGGGACACGCAGCCAGGTaGAGGCAACTGCTCCATCAGCACACTACGCAATCTCCCCCTACT +
Preference number: 5 (lower is better)
Translates to: CLLLFCHMTEGHAAR*RQLLHQHTTQSPPT
Trigger: AGTAGGGGGAGATTGCGTAGTGTGCTGATGGAGCAGTTGCCTCCACCTGGCTGCGTGTCCCTCCGTCATGTGACAGAAAAGAAGAAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS-3UTR CAA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCCTCCTCACTACCGTaGTCATCCACTAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVASSSLP*SSTKAE
Trigger: CTCTGCCTTAGTGGATGACAACGGTAGTGAGGAGGA...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAATGACATCCCCGGCTTaGAAGCCCAGTTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVMTSPA*KPSSWS
Trigger: TGACCAGGAACTGGGCTTCAAAGCCGGGGATGTCAT...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTTTGCGCTTGCGCTCGTaGATCAGACAGGCCACATTC +
Preference number: 5 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGLRLRS*IRQATF
Trigger: GAATGTGGCCTGTCTGATCAACGAGCGCAAGCGCAA...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGCTCTCCAGCTTGCGCTaGCGCTCGTTGATCAGACAG +
Preference number: 5 (lower is better)
Translates to: MWARCDFCSELLKACRQELSSLR*RSLIRQ
Trigger: CTGTCTGATCAACGAGCGCAAGCGCAAGCTGGAGAG...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGTCGATGCTCTCCAGCTaGCGCTTGCGCTCGTTGATC +
Preference number: 5 (lower is better)
Translates to: MWARCDFCSELLKACRQESMLSS*RLRSLI
Trigger: GATCAACGAGCGCAAGCGCAAGCTGGAGAGCATCGA...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTTGCCAGCGAGCTATCTaGTCGATGCTCTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGCQRAI*SMLSSL
Trigger: CAAGCTGGAGAGCATCGACAAGATAGCTCGCTGGCA...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCGTCCTACTGACGAGCTaGAAGGCATTTTTCACGCTG +
Preference number: 5 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSVLLTS*KAFFTL
Trigger: CAGCGTGAAAAATGCCTTCAAGCTCGTCAGTAGGAC...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGCATCTCCTTGTCCTCTaGCACCCGCCTCCTTTCATC +
Preference number: 5 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKHLLVL*HPPPFI
Trigger: GATGAAAGGAGGCGGGTGCAAGAGGACAAGGAGATG...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAATCCATTCCCATCTCCTaGTCCTCTTGCACCCGCCTC +
Preference number: 5 (lower is better)
Translates to: CDQTRAALCQPRLDGILESIPIS*SSCTRL
Trigger: GAGGCGGGTGCAAGAGGACAAGGAGATGGGAATGGA...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCACCTGTTGTAGCCTTTaGACTTTCCATGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCTCCSL*TFHVLP
Trigger: AGGCAGGACATGGAAAGTCAAAAGGCTACAACAGGT...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCAAGGGGGTGAGCCTGTaGAAGGTGTGCCAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: ARCDFCSELLKACRQEGIKGVSL*KVCQKS
Trigger: GCTCTTCTGGCACACCTTCAACAGGCTCACCCCCTT...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAAAGGGGGTGAGCCTGTaGAAGGTGTGCCAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: CDQTRAALCQPRLDGILEKGVSL*KVCQKS
Trigger: GCTCTTCTGGCACACCTTCAACAGGCTCACCCCCTT...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCAAGACAGTTCTTCTCTaGACACCCAGCTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAKTVLL*TPSSME
Trigger: TTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTT...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAACCCTGGATGCTGTGTTaGGACCTGCAGCAGGCACTT +
Preference number: 5 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKPWMLC*DLQQAL
Trigger: AAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGGG...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTAGAAGCAGGACTGCTTaGGCTGTCTTTGTGACTTCA +
Preference number: 5 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIRSRTA*AVFVTS
Trigger: TGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCT...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCAGGGCACTGAGCGGGTaGAAAGGGCACCTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLRALSG*KGHLSC
Trigger: GCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCT...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACTCACAATTGAAAAGGTaGCTTTTGACCCAAGGCTAC +
Preference number: 5 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHSQLKR*LLTQGY
Trigger: GTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTCTGGCCCGAGGCCGTTaGGGGCAGTGGTCATGTTCT +
Preference number: 5 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVALARGR*GQWSCS
Trigger: AGAACATGACCACTGCCCCAAACGGCCTCGGGCCAG...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACACATTGCTCACAAGTTaGAAGACTCTGTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHTLLTS*KTLSKS
Trigger: GGACTTTGACAGAGTCTTCAAACTTGTGAGCAATGT...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCTGGCAGAAGTCATGCTaGCCTGGGGGTCCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLWQKSC*PGGPRP
Trigger: TGGACGAGGACCCCCAGGCAAGCATGACTTCTGCCA...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGGTTGGGTCAGAAGATaGTCCAGTTCCTCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKGWVRR*SSSSVW
Trigger: CCAGACGGAGGAACTGGACAATCTTCTGACCCAACC...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTCGGCCTGGAAGCCGGTaGGGTCAGAAGATTGTCCAG +
Preference number: 5 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSRPGSR*GQKIVQ
Trigger: CTGGACAATCTTCTGACCCAACCGGCTTCCAGGCCG...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS GCA 90 bp CCCCAAGCATCACAGAGGACTGCACAGGCTGGCAGCTACGGGAACTaGAGAAATCGCTTATTCACTGCTTTGACGTTGTATGCGTTCCCG +
Preference number: 5 (lower is better)
Translates to: PQASQRTAQAGSYGN*RNRLFTALTLYAFP
Trigger: CGGGAACGCATACAACGTCAAAGCAGTGAATAAGCGATTTCTGCAGTTCCCGTAGCTGCCAGCCTGTGCAGTCCTCTGTGATGCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000399949.6
CDS GCA 90 bp TCAGAAAGGCAAGATTGTCCGTGCTCTTGCTCCTCCTGTAGCCCATaGTGTTGTTTTCAGGGTCCCTCACGAGAATCTCACACACGGCGG +
Preference number: 5 (lower is better)
Translates to: SERQDCPCSCSSCSP*CCFQGPSRESHTRR
Trigger: CCGCCGTGTGTGAGATTCTCGTGAGGGACCCTGAAAACAACAGCATGGGCTACAGGAGGAGCAAGAGCACGGACAATCTTGCCTTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 90 bp GCTCAGCCTCTTAGAAGACTGATGAGAGCTTTTGCTTCTGCTCTCTaGGGACAATCACTCCTAGGACTCTGCCTCTCAGCCCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: AQPLRRLMRAFASAL*GQSLLGLCLSAPAA
Trigger: AGCAGCAGGGGCTGAGAGGCAGAGTCCTAGGAGTGATTGTCCCCAGAGAGCAGAAGCAAAAGCTCTCATCAGTCTTCTAAGAGGCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS-3UTR CAA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCTCACTGATCAGCTCATaGATGGCCAGCTGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLSLISS*MASCSP
Trigger: CGGGGAGCAGCTGGCCATCAATGAGCTGATCAGTGA...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAAATGACATCCCCGGCTTaGAAGCCCAGTTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKMTSPA*KPSSWS
Trigger: TGACCAGGAACTGGGCTTCAAAGCCGGGGATGTCAT...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCACCACCAGTCCTTGTaGGAGGCTTCCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: YSMWARCDFCSELLKACRHHQSL*EASRTW
Trigger: CCAGGTTCTGGAAGCCTCCAACAAGGACTGGTGGTG...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCACCACCAGTCCTTGTaGGAGGCTTCCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSHHQSL*EASRTW
Trigger: CCAGGTTCTGGAAGCCTCCAACAAGGACTGGTGGTG...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCATGTCCCTGAGGTGTTaGATGTACACCCGCTCGGTG +
Preference number: 5 (lower is better)
Translates to: ARCDFCSELLKACRQEGIMSLRC*MYTRSV
Trigger: CACCGAGCGGGTGTACATCAAACACCTCAGGGACAT...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCACCCTGCTTCATGAGGTaGGCGAGCTCCAGGCAGGCG +
Preference number: 5 (lower is better)
Translates to: STQETKTVLLLTPSSMEAPCFMR*ASSRQA
Trigger: CGCCTGCCTGGAGCTCGCCAACCTCATGAAGCAGGG...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCTCCTGTGTGGTATACTaGAGCAGCTCGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSSCVVY*SSSASC
Trigger: GCAGCTGGCCGAGCTGCTCAAGTATACCACACAGGA...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATATCCTGTGTGGTATACTaGAGCAGCTCGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LITRFRAWYRVPHLGHLISCVVY*SSSASC
Trigger: GCAGCTGGCCGAGCTGCTCAAGTATACCACACAGGA...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCTCCTGTGTGGTATACTaGAGCAGCTCGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLSCVVY*SSSASC
Trigger: GCAGCTGGCCGAGCTGCTCAAGTATACCACACAGGA...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTTCCTGTGTGGTATACTaGAGCAGCTCGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSSCVVY*SSSASC
Trigger: GCAGCTGGCCGAGCTGCTCAAGTATACCACACAGGA...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCTTGCGCTTGCGCTCGTaGATCAGACAGGCCACATTC +
Preference number: 5 (lower is better)
Translates to: ARCDFCSELLKACRQEGILRLRS*IRQATF
Trigger: GAATGTGGCCTGTCTGATCAACGAGCGCAAGCGCAA...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGATTGCGCTTGCGCTCGTaGATCAGACAGGCCACATTC +
Preference number: 5 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGLRLRS*IRQATF
Trigger: GAATGTGGCCTGTCTGATCAACGAGCGCAAGCGCAA...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCTCTCCAGCTTGCGCTaGCGCTCGTTGATCAGACAG +
Preference number: 5 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLLSSLR*RSLIRQ
Trigger: CTGTCTGATCAACGAGCGCAAGCGCAAGCTGGAGAG...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCTCTCCAGCTTGCGCTaGCGCTCGTTGATCAGACAG +
Preference number: 5 (lower is better)
Translates to: YSMWARCDFCSELLKACRLSSLR*RSLIRQ
Trigger: CTGTCTGATCAACGAGCGCAAGCGCAAGCTGGAGAG...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGTGCCAGCGAGCTATCTaGTCGATGCTCTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: MWARCDFCSELLKACRQECQRAI*SMLSSL
Trigger: CAAGCTGGAGAGCATCGACAAGATAGCTCGCTGGCA...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCCTGCTGGCTTTTGCCTaGCTTAGTGATTTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSLLAFA*LSDFGQ
Trigger: CTGACCAAAATCACTAAGCAAGGCAAAAGCCAGCAG...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCCTGAGGTTGCAGTCCTaGTCGCGCCCATCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVLRLQS*SRPSPR
Trigger: CCTGGGGGATGGGCGCGACAAGGACTGCAACCTCAG...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGATTTTTCACGCTGAGGTaGCAGTCCTTGTCGCGCCCA +
Preference number: 5 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGFFTLR*QSLSRP
Trigger: TGGGCGCGACAAGGACTGCAACCTCAGCGTGAAAAA...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGTTTTTCACGCTGAGGTaGCAGTCCTTGTCGCGCCCA +
Preference number: 5 (lower is better)
Translates to: MWARCDFCSELLKACRQEFFTLR*QSLSRP
Trigger: TGGGCGCGACAAGGACTGCAACCTCAGCGTGAAAAA...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGCATCTCCTTGTCCTCTaGCACCCGCCTCCTTTCATC +
Preference number: 5 (lower is better)
Translates to: MWARCDFCSELLKACRQEHLLVL*HPPPFI
Trigger: GATGAAAGGAGGCGGGTGCAAGAGGACAAGGAGATG...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTCTCCCTCCTACCTGTTGTAGCCTTTaGACTTTCCATGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: GGNPTPGQSQCAAGFLPPTCCSL*TFHVLP
Trigger: AGGCAGGACATGGAAAGTCAAAAGGCTACAACAGGT...AGGAGGGAGAAATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCAGCGAGGACTTCCTCTaGGGTTCCGCCAGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLSEDFL*GSARPK
Trigger: CTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGCT...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTACCTGCAGCAGGCACTaGCTCATCATCAGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSTCSRH*LIISRG
Trigger: ACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGT...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCCCTGGATGCTGTGTTaGGACCTGCAGCAGGCACTT +
Preference number: 5 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLPWMLC*DLQQAL
Trigger: AAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGGG...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGCAGACACGTGCAGCATaGTGTCAACCCCGTCTTGAC +
Preference number: 5 (lower is better)
Translates to: MWARCDFCSELLKACRQEQTRAA*CQPRLD
Trigger: GTCAAGACGGGGTTGACACAATGCTGCACGTGTCTG...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTGCAGGAAGAGGAACCTaGCAGGATGACATTTGCACT +
Preference number: 5 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAAGRGT*QDDICT
Trigger: AGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTGC...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGGAGCAGTGCGGCTCTTaGAGAGTGCCTTCTGACCAG +
Preference number: 5 (lower is better)
Translates to: YSMWARCDFCSELLKACREQCGS*RVPSDQ
Trigger: CTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCTC...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTGCAGCAACTTCTGTCTCAGGACGTGCCGAGCGGCATGATGGTCCACAGAAGCAGAAGCAGGACTGCTTaGGCTGTCTTTGTGACTTCA +
Preference number: 5 (lower is better)
Translates to: LQQLLSQDVPSGMMVHRSRSRTA*AVFVTS
Trigger: TGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCT...GCTTCTGTGGACCATCATGCCGCTCGGCACGTCCTGAGACAGAAGTTGCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAGAAAGGGCACCTCTCTaGCAGAGCCTGCCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: CDQTRAALCQPRLDGILEERAPL*QSLPSL
Trigger: TAGAGAAGGCAGGCTCTGCAAGAGAGGTGCCCTTTC...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACTCTGACATCACAGACTaGTTTATTCTCAAACATGGG +
Preference number: 5 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHSDITD*FILKHG
Trigger: CCCATGTTTGAGAATAAACAAGTCTGTGATGTCAGA...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCAGACCCCTACAGTTATaGCTAAGGTGTGCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCRPLQL*LRCAGK
Trigger: TTTTCCTGCACACCTTAGCAATAACTGTAGGGGTCT...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCCGAGCGGCATGATGGTCCACAGAAGCAACTCGGGCTGTCAGCCATGGGGCACCTTCTTGACACTCCTTaGAGGGACAATTCTAAGTTT +
Preference number: 5 (lower is better)
Translates to: AERHDGPQKQLGLSAMGHLLDTP*RDNSKF
Trigger: AAACTTAGAATTGTCCCTCAAAGGAGTGTCAAGAAG...GTGCCCCATGGCTGACAGCCCGAGTTGCTTCTGTGGACCATCATGCCGCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGATTTCACCTAGTTGACTaGGGTCCTCCATTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRFHLVD*GPPFLA
Trigger: GGCCAGAAATGGAGGACCCAAGTCAACTAGGTGAAA...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAAAGAATGGCCGAGGCCTaGGCCGTCTCCCAGAGCCCC +
Preference number: 5 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKRMAEA*AVSQSP
Trigger: GGGGCTCTGGGAGACGGCCAAGGCCTCGGCCATTCT...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGCCATCTGAAGAAACGTaGGATGCTCTCATCTGCCGC +
Preference number: 5 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKPSEET*DALICR
Trigger: GCGGCAGATGAGAGCATCCAACGTTTCTTCAGATGG...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCATTCCCTTGTCAGAGCTaGACAAGGTTTGAAGCTGGC +
Preference number: 5 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPFPCQS*TRFEAG
Trigger: GCCAGCTTCAAACCTTGTCAAGCTCTGACAAGGGAA...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS-3UTR CAA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAATGACATCCCCGGCTTaGAAGCCCAGTTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIMTSPA*KPSSWS
Trigger: TGACCAGGAACTGGGCTTCAAAGCCGGGGATGTCAT...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCATGTCCCTGAGGTGTTaGATGTACACCCGCTCGGTG +
Preference number: 5 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSMSLRC*MYTRSV
Trigger: CACCGAGCGGGTGTACATCAAACACCTCAGGGACAT...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTATGTCCCTGAGGTGTTaGATGTACACCCGCTCGGTG +
Preference number: 5 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSMSLRC*MYTRSV
Trigger: CACCGAGCGGGTGTACATCAAACACCTCAGGGACAT...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTGATGGCAAAGCCCTCTaGATTTTGAAGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPDGKAL*ILKKAR
Trigger: TCTTGCTTTCTTCAAAATCAAGAGGGCTTTGCCATC...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGTCGATGCTCTCCAGCTaGCGCTTGCGCTCGTTGATC +
Preference number: 5 (lower is better)
Translates to: EAGESKIPNEIHTLSMEESMLSS*RLRSLI
Trigger: GATCAACGAGCGCAAGCGCAAGCTGGAGAGCATCGA...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATATGCCAGCGAGCTATCTaGTCGATGCTCTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LITRFRAWYRVPHLGHLICQRAI*SMLSSL
Trigger: CAAGCTGGAGAGCATCGACAAGATAGCTCGCTGGCA...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAGTCCGCTGCTGGCTTTaGCCTTGCTTAGTGATTTTG +
Preference number: 5 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIVRCWL*PCLVIL
Trigger: CAAAATCACTAAGCAAGGCAAAAGCCAGCAGCGGAC...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTTTTTTCACGCTGAGGTaGCAGTCCTTGTCGCGCCCA +
Preference number: 5 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSFFTLR*QSLSRP
Trigger: TGGGCGCGACAAGGACTGCAACCTCAGCGTGAAAAA...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAGTCCTACTGACGAGCTaGAAGGCATTTTTCACGCTG +
Preference number: 5 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVVLLTS*KAFFTL
Trigger: CAGCGTGAAAAATGCCTTCAAGCTCGTCAGTAGGAC...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTATGTGTCAACCCCGTCTaGACGGCATCCTTGAAAATC +
Preference number: 5 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVCVNPV*TASLKI
Trigger: GATTTTCAAGGATGCCGTCAAGACGGGGTTGACACA...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAACCACAGCACCCAGCCTaGCATAGCAGTTTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKPQHPA*HSSFLG
Trigger: ACCTAAGAAACTGCTATGCAAGGCTGGGTGCTGTGG...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAACCACAGCACCCAGCCTaGCATAGCAGTTTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: CDQTRAALCQPRLDGILEPQHPA*HSSFLG
Trigger: ACCTAAGAAACTGCTATGCAAGGCTGGGTGCTGTGG...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTGAAAGGGCACCTCTCTaGCAGAGCCTGCCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSERAPL*QSLPSL
Trigger: TAGAGAAGGCAGGCTCTGCAAGAGAGGTGCCCTTTC...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTTATCAGCAATTTGGCTaGCAGAGATTTCCACCTGAT +
Preference number: 5 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIYQQFG*QRFPPD
Trigger: ATCAGGTGGAAATCTCTGCAAGCCAAATTGCTGATA...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCTATCAGCAATTTGGCTaGCAGAGATTTCCACCTGAT +
Preference number: 5 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAYQQFG*QRFPPD
Trigger: ATCAGGTGGAAATCTCTGCAAGCCAAATTGCTGATA...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTATGTTGCCCAAAGCCTaGCAAAGTAGGTTAGCGAGT +
Preference number: 5 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAMLPKA*QSRLAS
Trigger: ACTCGCTAACCTACTTTGCAAGGCTTTGGGCAACAT...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAATGTTGCCCAAAGCCTaGCAAAGTAGGTTAGCGAGT +
Preference number: 5 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRMLPKA*QSRLAS
Trigger: ACTCGCTAACCTACTTTGCAAGGCTTTGGGCAACAT...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGAGTTCCTCCGTCTGGTaGGTCCCATACAAGCTGACC +
Preference number: 5 (lower is better)
Translates to: YSMWARCDFCSELLKACRSSSVW*VPYKLT
Trigger: GGTCAGCTTGTATGGGACCAACCAGACGGAGGAACT...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGATGTCCCTGAGGTGTTaGATGTACACCCGCTCGGTG +
Preference number: 5 (lower is better)
Translates to: EAGESKIPNEIHTLSMEEMSLRC*MYTRSV
Trigger: CACCGAGCGGGTGTACATCAAACACCTCAGGGACAT...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGTCGATGCTCTCCAGCTaGCGCTTGCGCTCGTTGATC +
Preference number: 5 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKSMLSS*RLRSLI
Trigger: GATCAACGAGCGCAAGCGCAAGCTGGAGAGCATCGA...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGTTTTTCACGCTGAGGTaGCAGTCCTTGTCGCGCCCA +
Preference number: 5 (lower is better)
Translates to: EAGESKIPNEIHTLSMEEFFTLR*QSLSRP
Trigger: TGGGCGCGACAAGGACTGCAACCTCAGCGTGAAAAA...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGGTCCTACTGACGAGCTaGAAGGCATTTTTCACGCTG +
Preference number: 5 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKVLLTS*KAFFTL
Trigger: CAGCGTGAAAAATGCCTTCAAGCTCGTCAGTAGGAC...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAGCGAGGACTTCCTCTaGGGTTCCGCCAGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSSEDFL*GSARPK
Trigger: CTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGCT...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAAGACAGTTCTTCTCTaGACACCCAGCTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIKTVLL*TPSSME
Trigger: TTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTT...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAATGTGTCAACCCCGTCTaGACGGCATCCTTGAAAATC +
Preference number: 5 (lower is better)
Translates to: CDQTRAALCQPRLDGILECVNPV*TASLKI
Trigger: GATTTTCAAGGATGCCGTCAAGACGGGGTTGACACA...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAGCAGGAAGAGGAACCTaGCAGGATGACATTTGCACT +
Preference number: 5 (lower is better)
Translates to: CDQTRAALCQPRLDGILEAGRGT*QDDICT
Trigger: AGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTGC...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTTTGAGGATGCGTAAGTaGCTCTGCACTGAGGACCCT +
Preference number: 5 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSLRMRK*LCTEDP
Trigger: AGGGTCCTCAGTGCAGAGCAACTTACGCATCCTCAA...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GATGCTGTGTTTGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTAAAAGCAGTGGATTCTaGAGGATGCGTAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: DAVFGPAAGTCSSSAGVAKSSGF*RMRKLL
Trigger: GAGCAACTTACGCATCCTCAAGAATCCACTGCTTTT...AGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCAAACACAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCCACAGCACCCAGCCTaGCATAGCAGTTTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: YSMWARCDFCSELLKACRPQHPA*HSSFLG
Trigger: ACCTAAGAAACTGCTATGCAAGGCTGGGTGCTGTGG...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGAGAAGCAGGACTGCTTaGGCTGTCTTTGTGACTTCA +
Preference number: 5 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKRSRTA*AVFVTS
Trigger: TGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCT...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTATTGAGCCTTCCATTCTaGAAGAACTCAGGCATGTGG +
Preference number: 5 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVLSLPF*KNSGMW
Trigger: CCACATGCCTGAGTTCTTCAAGAATGGAAGGCTCAA...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTTGAAAAGGTTGCTTTaGACCCAAGGCTACTTCAAT +
Preference number: 5 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPLKRLL*TQGYFN
Trigger: ATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAA...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCAAGGAGTATCAGCAATTaGGCTTGCAGAGATTTCCAC +
Preference number: 5 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPRSISN*ACRDFH
Trigger: GTGGAAATCTCTGCAAGCCAAATTGCTGATACTCCT...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TGGACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTTGTACACTATACTTaGGCTGTCAACAGCAAATTC +
Preference number: 5 (lower is better)
Translates to: WTCSRHLLIISRGGFSCCLVHYT*AVNSKF
Trigger: GAATTTGCTGTTGACAGCCAAAGTATAGTGTACAAG...GCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGTTCAGAAAGGCAAGATaGTCCGTGCTCTTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKFRKAR*SVLLLL
Trigger: GAGGAGCAAGAGCACGGACAATCTTGCCTTTCTGAA...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATATTCACCAGAAGGTCCTaGCTGCCCTCATCACCATGT +
Preference number: 5 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIFTRRS*LPSSPC
Trigger: ACATGGTGATGAGGGCAGCAAGGACCTTCTGGTGAA...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS TCA 90 bp ACTTGTTATTGGTGTGCTTTGAGCCTCAAGTGGAATGATGATACATaGAAGCACCCGTTGGATGCTCTCATCTGCCGCCGGCGTCCCACA +
Preference number: 5 (lower is better)
Translates to: TCYWCALSLKWNDDT*KHPLDALICRRRPT
Trigger: TGTGGGACGCCGGCGGCAGATGAGAGCATCCAACGGGTGCTTTCATGTATCATCATTCCACTTGAGGCTCAAAGCACACCAATAACAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494772.5
CDS-3UTR CAA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGGTCCGCATCTGCTGCTaGTTCTCACAGTGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKVRICC*FSQCLW
Trigger: CCACAGACACTGTGAGAACAAGCAGCAGATGCGGAC...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CGTGCAGGCAGGAGGGAATCCGACTCCGGGACAAAGCCAGTGTGCAGCAGGATTAAAGCCCTCTTGATTTaGAAGAAAGCAAGATCCTAT +
Preference number: 5 (lower is better)
Translates to: RAGRRESDSGTKPVCSRIKALLI*KKARSY
Trigger: ATAGGATCTTGCTTTCTTCAAAATCAAGAGGGCTTT...AATCCTGCTGCACACTGGCTTTGTCCCGGAGTCGGATTCCCTCCTGCCTGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGCCCTGCTTCATGAGGTaGGCGAGCTCCAGGCAGGCG +
Preference number: 5 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRPCFMR*ASSRQA
Trigger: CGCCTGCCTGGAGCTCGCCAACCTCATGAAGCAGGG...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCACCCTGCTTCATGAGGTaGGCGAGCTCCAGGCAGGCG +
Preference number: 5 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPPCFMR*ASSRQA
Trigger: CGCCTGCCTGGAGCTCGCCAACCTCATGAAGCAGGG...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAAGAAATGTCTGTACTaGCCCTGCTTCATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIKKCLY*PCFMRL
Trigger: CAACCTCATGAAGCAGGGCAAGTACAGACATTTCTT...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGCTGCTGGCTTTTGCCTaGCTTAGTGATTTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: MWARCDFCSELLKACRQELLAFA*LSDFGQ
Trigger: CTGACCAAAATCACTAAGCAAGGCAAAAGCCAGCAG...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAACTGCTGGCTTTTGCCTaGCTTAGTGATTTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKLLAFA*LSDFGQ
Trigger: CTGACCAAAATCACTAAGCAAGGCAAAAGCCAGCAG...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCCTGCTGGCTTTTGCCTaGCTTAGTGATTTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: ARCDFCSELLKACRQEGILLAFA*LSDFGQ
Trigger: CTGACCAAAATCACTAAGCAAGGCAAAAGCCAGCAG...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTCCGCTGCTGGCTTTaGCCTTGCTTAGTGATTTTG +
Preference number: 5 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIVRCWL*PCLVIL
Trigger: CAAAATCACTAAGCAAGGCAAAAGCCAGCAGCGGAC...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCACTGAGGTTGCAGTCCTaGTCGCGCCCATCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPLRLQS*SRPSPR
Trigger: CCTGGGGGATGGGCGCGACAAGGACTGCAACCTCAG...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGCATCTCCTTGTCCTCTaGCACCCGCCTCCTTTCATC +
Preference number: 5 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKHLLVL*HPPPFI
Trigger: GATGAAAGGAGGCGGGTGCAAGAGGACAAGGAGATG...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGACCTGTTGTAGCCTTTaGACTTTCCATGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKTCCSL*TFHVLP
Trigger: AGGCAGGACATGGAAAGTCAAAAGGCTACAACAGGT...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAAAGGGGGTGAGCCTGTaGAAGGTGTGCCAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: STQETKTVLLLTPSSMEAKGVSL*KVCQKS
Trigger: GCTCTTCTGGCACACCTTCAACAGGCTCACCCCCTT...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCACCTGCAGCAGGCACTaGCTCATCATCAGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSTCSRH*LIISRG
Trigger: ACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGT...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTTGTGTCAACCCCGTCTaGACGGCATCCTTGAAAATC +
Preference number: 5 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSCVNPV*TASLKI
Trigger: GATTTTCAAGGATGCCGTCAAGACGGGGTTGACACA...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CTGCAACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTGCAGGAAGAGGAACCTaGCAGGATGACATTTGCACT +
Preference number: 5 (lower is better)
Translates to: LQPPLPRFKRFSYLSLPSAGRGT*QDDICT
Trigger: AGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTGC...ACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCTTCTCTCCACTTTGCTaGCAGGAAGAGGAACCTTGC +
Preference number: 5 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSFSPLC*QEEEPC
Trigger: GCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGAA...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CATCTCCTGTCCAGGGCACTGAGCGGGTTGAAAGGGCACCTCTCTTGCAGAGCCATGGTTATGCCCTGTTaGGCTTTATATGTGATAAAG +
Preference number: 5 (lower is better)
Translates to: HLLSRALSGLKGHLSCRAMVMPC*ALYVIK
Trigger: CTTTATCACATATAAAGCCAAACAGGGCATAACCAT...GGCTCTGCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCTGGACAGGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATAGGGCACTGAGCGGGTaGAAAGGGCACCTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHRALSG*KGHLSC
Trigger: GCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTCACGGGTGTTTCTGTGTAAGACCCCTACAGTTATaGCTAAGGTGTGCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: YRVPHLGHLIVGHGCFCVRPLQL*LRCAGK
Trigger: TTTTCCTGCACACCTTAGCAATAACTGTAGGGGTCT...TACACAGAAACACCCGTGACCCACTATGAGATGGCCCAGATGTGGGACCCGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAGACCCCTACAGTTATaGCTAAGGTGTGCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKIRPLQL*LRCAGK
Trigger: TTTTCCTGCACACCTTAGCAATAACTGTAGGGGTCT...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGAGACCCCTACAGTTATaGCTAAGGTGTGCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKRPLQL*LRCAGK
Trigger: TTTTCCTGCACACCTTAGCAATAACTGTAGGGGTCT...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGTTGAGCCTTCCATTCTaGAAGAACTCAGGCATGTGG +
Preference number: 5 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKLSLPF*KNSGMW
Trigger: CCACATGCCTGAGTTCTTCAAGAATGGAAGGCTCAA...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAATTGAGCCTTCCATTCTaGAAGAACTCAGGCATGTGG +
Preference number: 5 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKLSLPF*KNSGMW
Trigger: CCACATGCCTGAGTTCTTCAAGAATGGAAGGCTCAA...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCGACTGGGACACCAAGTaGATCTGCATGAAGGAGTAT +
Preference number: 5 (lower is better)
Translates to: ARCDFCSELLKACRQEGIDWDTK*ICMKEY
Trigger: ATACTCCTTCATGCAGATCAACTTGGTGTCCCAGTC...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGAGACTGGGACACCAAGTaGATCTGCATGAAGGAGTAT +
Preference number: 5 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGDWDTK*ICMKEY
Trigger: ATACTCCTTCATGCAGATCAACTTGGTGTCCCAGTC...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGTTTCACCTAGTTGACTaGGGTCCTCCATTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: YSMWARCDFCSELLKACRFHLVD*GPPFLA
Trigger: GGCCAGAAATGGAGGACCCAAGTCAACTAGGTGAAA...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GACCTGCAGCAGGCACTTGCTCATCATCAGCAGGGGTGGCTTCAGCTGCTGCCTCAAGTTACATCAATCTaGTACACTATACTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: DLQQALAHHQQGWLQLLPQVTSI*YTILWL
Trigger: CAGCCAAAGTATAGTGTACAAGATTGATGTAACTTG...AGGCAGCAGCTGAAGCCACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGCTGAGGTCTGCAAGATaGGAGGTGGACTTCCGCTTA +
Preference number: 5 (lower is better)
Translates to: EAGESKIPNEIHTLSMEELRSAR*EVDFRL
Trigger: TAAGCGGAAGTCCACCTCCAATCTTGCAGACCTCAG...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AACACCGTGGTCAGCCCCACGGCAGCTGTAGGTCCCCCAGTATTACAGAAGAGAACATTGCTCACAAGTTaGAAGACTCTGTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: NTVVSPTAAVGPPVLQKRTLLTS*KTLSKS
Trigger: GGACTTTGACAGAGTCTTCAAACTTGTGAGCAATGT...TCTCTTCTGTAATACTGGGGGACCTACAGCTGCCGTGGGGCTGACCACGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAGCAGCCTCAGTCACATaGCTCACAAGTTTGAAGACT +
Preference number: 5 (lower is better)
Translates to: CDQTRAALCQPRLDGILEAASVT*LTSLKT
Trigger: AGTCTTCAAACTTGTGAGCAATGTGACTGAGGCTGC...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS TCA 90 bp GCTGATGGGGTAAAGATGGCCACAGTTGCTTTGAACTCTCTCCATTaGGAGGTGGAGTTTATCTTCCGACAGCCTGAATTTAGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: ADGVKMATVALNSLH*EVEFIFRQPEFSLA
Trigger: GGCCAGGCTAAATTCAGGCTGTCGGAAGATAAACTCCACCTCTCAATGGAGAGAGTTCAAAGCAACTGTGGCCATCTTTACCCCATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS TCA 90 bp TTAATGTGCGCCAGGCACTGCGCTCAGCGCTGGAATAAATCCTCTTaGGAGCCTCACAAGCATCTTGGAGTGTTGCTGTCTGGTTATGAA +
Preference number: 5 (lower is better)
Translates to: LMCARHCAQRWNKSS*EPHKHLGVLLSGYE
Trigger: TTCATAACCAGACAGCAACACTCCAAGATGCTTGTGAGGCTCTCAAGAGGATTTATTCCAGCGCTGAGCGCAGTGCCTGGCGCACATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488060.1
CDS-3UTR CAA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCATGACATCCCCGGCTTaGAAGCCCAGTTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSMTSPA*KPSSWS
Trigger: TGACCAGGAACTGGGCTTCAAAGCCGGGGATGTCAT...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATCACCACCAGTCCTTGTaGGAGGCTTCCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHHHQSL*EASRTW
Trigger: CCAGGTTCTGGAAGCCTCCAACAAGGACTGGTGGTG...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCAGTCCGCATCTGCTGCTaGTTCTCACAGTGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSVRICC*FSQCLW
Trigger: CCACAGACACTGTGAGAACAAGCAGCAGATGCGGAC...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCCTGCTGGCTTTTGCCTaGCTTAGTGATTTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSLLAFA*LSDFGQ
Trigger: CTGACCAAAATCACTAAGCAAGGCAAAAGCCAGCAG...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCATTTTTCACGCTGAGGTaGCAGTCCTTGTCGCGCCCA +
Preference number: 5 (lower is better)
Translates to: STQETKTVLLLTPSSMEAFFTLR*QSLSRP
Trigger: TGGGCGCGACAAGGACTGCAACCTCAGCGTGAAAAA...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAACCTGTTGTAGCCTTTaGACTTTCCATGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LITRFRAWYRVPHLGHLITCCSL*TFHVLP
Trigger: AGGCAGGACATGGAAAGTCAAAAGGCTACAACAGGT...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATAAGGGGGTGAGCCTGTaGAAGGTGTGCCAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHKGVSL*KVCQKS
Trigger: GCTCTTCTGGCACACCTTCAACAGGCTCACCCCCTT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCCAGACACGTGCAGCATaGTGTCAACCCCGTCTTGAC +
Preference number: 5 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVQTRAA*CQPRLD
Trigger: GTCAAGACGGGGTTGACACAATGCTGCACGTGTCTG...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGTTGAGGATGCGTAAGTaGCTCTGCACTGAGGACCCT +
Preference number: 5 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKLRMRK*LCTEDP
Trigger: AGGGTCCTCAGTGCAGAGCAACTTACGCATCCTCAA...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAAAAAGCAGTGGATTCTaGAGGATGCGTAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: CDQTRAALCQPRLDGILEKSSGF*RMRKLL
Trigger: GAGCAACTTACGCATCCTCAAGAATCCACTGCTTTT...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp ATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGTCTTTGTGACTTCATaGCTAAGGACGATGTCAGGA +
Preference number: 5 (lower is better)
Translates to: MWARCDFCSELLKACRQEVFVTS*LRTMSG
Trigger: TCCTGACATCGTCCTTAGCAATGAAGTCACAAAGAC...CTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GGTGGCTTCAGCTGCTGCCTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCATCTGACATCACAGACTaGTTTATTCTCAAACATGGG +
Preference number: 5 (lower is better)
Translates to: GGFSCCLITRFRAWYRVPSDITD*FILKHG
Trigger: CCCATGTTTGAGAATAAACAAGTCTGTGATGTCAGA...TGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAGGCAGCAGCTGAAGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGTCACAATTGAAAAGGTaGCTTTTGACCCAAGGCTAC +
Preference number: 5 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKSQLKR*LLTQGY
Trigger: GTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTGACTGGGACACCAAGTaGATCTGCATGAAGGAGTAT +
Preference number: 5 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSDWDTK*ICMKEY
Trigger: ATACTCCTTCATGCAGATCAACTTGGTGTCCCAGTC...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATAAGAGGCGCACAAGCTaGGCTGGGCTGAGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHKRRTS*AGLSLA
Trigger: AGCCAAACTCAGCCCAGCCAAGCTTGTGCGCCTCTT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAACTCTGTCAAAGTCCTaGGCCCTTATCGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: STQETKTVLLLTPSSMEATLSKS*ALIGLL
Trigger: GAGGAGCCCGATAAGGGCCAAGGACTTTGACAGAGT...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCGCAGCCTCAGTCACATaGCTCACAAGTTTGAAGACT +
Preference number: 5 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLAASVT*LTSLKT
Trigger: AGTCTTCAAACTTGTGAGCAATGTGACTGAGGCTGC...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAAGTTCCTCCGTCTGGTaGGTCCCATACAAGCTGACC +
Preference number: 5 (lower is better)
Translates to: STQETKTVLLLTPSSMEASSSVW*VPYKLT
Trigger: GGTCAGCTTGTATGGGACCAACCAGACGGAGGAACT...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS TCA 90 bp CCCAATGACTGTGGTCCAAGTGACATCACAAGACTAGGGCCCAAGTaGCCTTGGTCCACGCATAGAACTCTGGGGAATAATAAAACGGTT +
Preference number: 5 (lower is better)
Translates to: PNDCGPSDITRLGPK*PWSTHRTLGNNKTV
Trigger: AACCGTTTTATTATTCCCCAGAGTTCTATGCGTGGACCAAGGTCACTTGGGCCCTAGTCTTGTGATGTCACTTGGACCACAGTCATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS-3UTR CAA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCTCCTCCTCACTACCGTaGTCATCCACTAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVSSSLP*SSTKAE
Trigger: CTCTGCCTTAGTGGATGACAACGGTAGTGAGGAGGA...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATATGACATCCCCGGCTTaGAAGCCCAGTTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHMTSPA*KPSSWS
Trigger: TGACCAGGAACTGGGCTTCAAAGCCGGGGATGTCAT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTAAGAAATGTCTGTACTaGCCCTGCTTCATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSKKCLY*PCFMRL
Trigger: CAACCTCATGAAGCAGGGCAAGTACAGACATTTCTT...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGGTCCTACTGACGAGCTaGAAGGCATTTTTCACGCTG +
Preference number: 5 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKVLLTS*KAFFTL
Trigger: CAGCGTGAAAAATGCCTTCAAGCTCGTCAGTAGGAC...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCAAGCGAGGACTTCCTCTaGGGTTCCGCCAGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPSEDFL*GSARPK
Trigger: CTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTCGCT...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AACCTCCGCTTCCCAGATTCAAAAGATTCTCCTACCTCAGCCTTCCCAGTAGCTAAGACAGTTCTTCTCTaGACACCCAGCTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: NLRFPDSKDSPTSAFPVAKTVLL*TPSSME
Trigger: TTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTT...AGCTACTGGGAAGGCTGAGGTAGGAGAATCTTTTGAATCTGGGAAGCGGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCAAGACAGTTCTTCTCTaGACACCCAGCTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLKTVLL*TPSSME
Trigger: TTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTT...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTACCTTCTCTCCTTCATaGATCCCTAAAAGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGTFSPS*IPKRKF
Trigger: AAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGT...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGACCTTCTCTCCTTCATaGATCCCTAAAAGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKTFSPS*IPKRKF
Trigger: AAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGT...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGAAGCGTCTTGACGGCATCCTaGAAAATCAAATGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: KETYTHTPPHMPQDLSRSVLTAS*KIKCRS
Trigger: ACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGAC...GCTTCTGGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGGTCTTGACGGCATCCTaGAAAATCAAATGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKVLTAS*KIKCRS
Trigger: ACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGAC...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGGCAGGAAGAGGAACCTaGCAGGATGACATTTGCACT +
Preference number: 5 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKAGRGT*QDDICT
Trigger: AGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTGC...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCTTGAGGATGCGTAAGTaGCTCTGCACTGAGGACCCT +
Preference number: 5 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSLRMRK*LCTEDP
Trigger: AGGGTCCTCAGTGCAGAGCAACTTACGCATCCTCAA...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCATTGAGGATGCGTAAGTaGCTCTGCACTGAGGACCCT +
Preference number: 5 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSLRMRK*LCTEDP
Trigger: AGGGTCCTCAGTGCAGAGCAACTTACGCATCCTCAA...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCACCACAGCACCCAGCCTaGCATAGCAGTTTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: STQETKTVLLLTPSSMEAPQHPA*HSSFLG
Trigger: ACCTAAGAAACTGCTATGCAAGGCTGGGTGCTGTGG...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGGTCTTTGTGACTTCATaGCTAAGGACGATGTCAGGA +
Preference number: 5 (lower is better)
Translates to: YSMWARCDFCSELLKACRVFVTS*LRTMSG
Trigger: TCCTGACATCGTCCTTAGCAATGAAGTCACAAAGAC...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGGAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATATCTGACATCACAGACTaGTTTATTCTCAAACATGGG +
Preference number: 5 (lower is better)
Translates to: RKSVEVGGSRKLGLSWKISDITD*FILKHG
Trigger: CCCATGTTTGAGAATAAACAAGTCTGTGATGTCAGA...TATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCAGGAGGGAATCCTGAAGAATACACCTTaGTCTCTGACATCACAGACT +
Preference number: 5 (lower is better)
Translates to: ARCDFCSELLKACRQEGILKNTP*SLTSQT
Trigger: AGTCTGTGATGTCAGAGACAAAGGTGTATTCTTCAG...GATTCCCTCCTGCCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAAGTCCGTGGAGGTAGGTGGGAGCCGGAAGTTAGGGCTCAGCTGGAAAATAAACTGAAGAATACACCTTaGTCTCTGACATCACAGACT +
Preference number: 5 (lower is better)
Translates to: EVRGGRWEPEVRAQLENKLKNTP*SLTSQT
Trigger: AGTCTGTGATGTCAGAGACAAAGGTGTATTCTTCAG...TTTATTTTCCAGCTGAGCCCTAACTTCCGGCTCCCACCTACCTCCACGGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGTTGAAAAGGTTGCTTTaGACCCAAGGCTACTTCAAT +
Preference number: 5 (lower is better)
Translates to: VMTVSSLPQRQLGLQRLKLKRLL*TQGYFN
Trigger: ATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAA...CTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCAGGAGTATCAGCAATTaGGCTTGCAGAGATTTCCAC +
Preference number: 5 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSRSISN*ACRDFH
Trigger: GTGGAAATCTCTGCAAGCCAAATTGCTGATACTCCT...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCCTCCTGCGGCGCCTCTaGGCGGAGCCTACAAAGTCA +
Preference number: 5 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFLLRRL*AEPTKS
Trigger: TGACTTTGTAGGCTCCGCCAAGAGGCGCCGCAGGAG...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382095.8
ENST00000382108.8
CDS-3UTR CAA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCCCTTTGAACAGGCATTaGACCCCTCTCGGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSPLNRH*TPLGSE
Trigger: TTCAGAGCCGAGAGGGGTCAAATGCCTGTTCAAAGG...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACAAGAATGGCCGAGGCCTaGGCCGTCTCCCAGAGCCCC +
Preference number: 5 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTRMAEA*AVSQSP
Trigger: GGGGCTCTGGGAGACGGCCAAGGCCTCGGCCATTCT...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCATGGCAGAAGTCATGCTaGCCTGGGGGTCCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPWQKSC*PGGPRP
Trigger: TGGACGAGGACCCCCAGGCAAGCATGACTTCTGCCA...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCCCATCTGAAGAAACGTaGGATGCTCTCATCTGCCGC +
Preference number: 5 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSPSEET*DALICR
Trigger: GCGGCAGATGAGAGCATCCAACGTTTCTTCAGATGG...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGAGGCTTCATCTTCCCTaGTCAGAGCTTGACAAGGTT +
Preference number: 5 (lower is better)
Translates to: EAGESKIPNEIHTLSMEERLHLP*SELDKV
Trigger: AACCTTGTCAAGCTCTGACAAGGGAAGATGAAGCCT...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS-3UTR CAA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATTCCTCCTCACTACCGTaGTCATCCACTAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHSSSLP*SSTKAE
Trigger: CTCTGCCTTAGTGGATGACAACGGTAGTGAGGAGGA...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACTCACTGATCAGCTCATaGATGGCCAGCTGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHSLISS*MASCSP
Trigger: CGGGGAGCAGCTGGCCATCAATGAGCTGATCAGTGA...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp ACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGTGGGTAAAGCCCTCTTGATTTaGAAGAAAGCAAGATCCTAT +
Preference number: 5 (lower is better)
Translates to: TRFRAWYRVPHLGHLIVGKALLI*KKARSY
Trigger: ATAGGATCTTGCTTTCTTCAAAATCAAGAGGGCTTT...ACCCACTATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CTAATCACTCGCTTTAGAGCATGGTACCGGGTCCCACATCTGGGCCATCTCATAGATGGCAAAGCCCTCTaGATTTTGAAGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: LITRFRAWYRVPHLGHLIDGKAL*ILKKAR
Trigger: TCTTGCTTTCTTCAAAATCAAGAGGGCTTTGCCATC...TATGAGATGGCCCAGATGTGGGACCCGGTACCATGCTCTAAAGCGAGTGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACCTCTCCAGCTTGCGCTaGCGCTCGTTGATCAGACAG +
Preference number: 5 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHLSSLR*RSLIRQ
Trigger: CTGTCTGATCAACGAGCGCAAGCGCAAGCTGGAGAG...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACCTCTCCAGCTTGCGCTaGCGCTCGTTGATCAGACAG +
Preference number: 5 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNLSSLR*RSLIRQ
Trigger: CTGTCTGATCAACGAGCGCAAGCGCAAGCTGGAGAG...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACTCGATGCTCTCCAGCTaGCGCTTGCGCTCGTTGATC +
Preference number: 5 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNSMLSS*RLRSLI
Trigger: GATCAACGAGCGCAAGCGCAAGCTGGAGAGCATCGA...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCAGTCCGCTGCTGGCTTTaGCCTTGCTTAGTGATTTTG +
Preference number: 5 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSVRCWL*PCLVIL
Trigger: CAAAATCACTAAGCAAGGCAAAAGCCAGCAGCGGAC...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCATCCATTCCCATCTCCTaGTCCTCTTGCACCCGCCTC +
Preference number: 5 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPSIPIS*SSCTRL
Trigger: GAGGCGGGTGCAAGAGGACAAGGAGATGGGAATGGA...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACTCCATTCCCATCTCCTaGTCCTCTTGCACCCGCCTC +
Preference number: 5 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHSIPIS*SSCTRL
Trigger: GAGGCGGGTGCAAGAGGACAAGGAGATGGGAATGGA...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TGTGACCAGACACGTGCAGCATTGTGTCAACCCCGTCTTGACGGCATCCTTGAAACCTTCTCTCCTTCATaGATCCCTAAAAGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: CDQTRAALCQPRLDGILETFSPS*IPKRKF
Trigger: AAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGT...TTCAAGGATGCCGTCAAGACGGGGTTGACACAATGCTGCACGTGTCTGGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGACCTTCTCTCCTTCATaGATCCCTAAAAGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKTFSPS*IPKRKF
Trigger: AAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGT...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACACCTGCAGCAGGCACTaGCTCATCATCAGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNTCSRH*LIISRG
Trigger: ACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGT...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCACCCTGGATGCTGTGTTaGGACCTGCAGCAGGCACTT +
Preference number: 5 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPPWMLC*DLQQAL
Trigger: AAGTGCCTGCTGCAGGTCCAAACACAGCATCCAGGG...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
CDS-3UTR CAA 90 bp ATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCGTCTTGACGGCATCCTaGAAAATCAAATGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: IKLCVMTVSSLPQRQLGLVLTAS*KIKCRS
Trigger: ACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGAC...GAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTGTCTTGACGGCATCCTaGAAAATCAAATGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSVLTAS*KIKCRS
Trigger: ACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGAC...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGGAGCAGTGCGGCTCTTaGAGAGTGCCTTCTGACCAG +
Preference number: 5 (lower is better)
Translates to: MYNIDKEKEMIICRCQPREQCGS*RVPSDQ
Trigger: CTGGTCAGAAGGCACTCTCAAAGAGCCGCACTGCTC...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCAGGGCACTGAGCGGGTaGAAAGGGCACCTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFRALSG*KGHLSC
Trigger: GCAAGAGAGGTGCCCTTTCAACCCGCTCAGTGCCCT...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAACCCTTAGCAGTGCTGCCTGTAAGCATGTGTGCCAAGGTGGCTCAGAATGGACAAGGTTATGTTTTCTaGATGCATGATGTCACTCTC +
Preference number: 5 (lower is better)
Translates to: EPLAVLPVSMCAKVAQNGQGYVF*MHDVTL
Trigger: GAGAGTGACATCATGCATCAAGAAAACATAACCTTG...TCCATTCTGAGCCACCTTGGCACACATGCTTACAGGCAGCACTGCTAAGGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGACTGAAGGTGATTCCAAGCTTGTACACTATACTTaGGCTGTCAACAGCAAATTC +
Preference number: 5 (lower is better)
Translates to: LLPSTKAAGSPKTEGDSKLVHYT*AVNSKF
Trigger: GAATTTGCTGTTGACAGCCAAAGTATAGTGTACAAG...CTTGGAATCACCTTCAGTCTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCCAAAGCAAGTTACATCAATCTaGTACACTATACTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: ALCHDRLLPSTKAAGSPKQVTSI*YTILWL
Trigger: CAGCCAAAGTATAGTGTACAAGATTGATGTAACTTG...CTTTGGAGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCATTCAGAAAGGCAAGATaGTCCGTGCTCTTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: STQETKTVLLLTPSSMEAFRKAR*SVLLLL
Trigger: GAGGAGCAAGAGCACGGACAATCTTGCCTTTCTGAA...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAACGCTTATTCACTGCTTaGACGTTGTATGCGTTCCCG +
Preference number: 5 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKRLFTA*TLYAFP
Trigger: CGGGAACGCATACAACGTCAAAGCAGTGAATAAGCG...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343003.10
CDS-3UTR CAA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAATCACTGATCAGCTCATaGATGGCCAGCTGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKSLISS*MASCSP
Trigger: CGGGGAGCAGCTGGCCATCAATGAGCTGATCAGTGA...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACATGACATCCCCGGCTTaGAAGCCCAGTTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNMTSPA*KPSSWS
Trigger: TGACCAGGAACTGGGCTTCAAAGCCGGGGATGTCAT...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCAATGTCCCTGAGGTGTTaGATGTACACCCGCTCGGTG +
Preference number: 5 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPMSLRC*MYTRSV
Trigger: CACCGAGCGGGTGTACATCAAACACCTCAGGGACAT...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCGATGGCAAAGCCCTCTaGATTTTGAAGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLDGKAL*ILKKAR
Trigger: TCTTGCTTTCTTCAAAATCAAGAGGGCTTTGCCATC...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGATTGCGCTTGCGCTCGTaGATCAGACAGGCCACATTC +
Preference number: 5 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRLRLRS*IRQATF
Trigger: GAATGTGGCCTGTCTGATCAACGAGCGCAAGCGCAA...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAATCGATGCTCTCCAGCTaGCGCTTGCGCTCGTTGATC +
Preference number: 5 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKSMLSS*RLRSLI
Trigger: GATCAACGAGCGCAAGCGCAAGCTGGAGAGCATCGA...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCATGCCAGCGAGCTATCTaGTCGATGCTCTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPCQRAI*SMLSSL
Trigger: CAAGCTGGAGAGCATCGACAAGATAGCTCGCTGGCA...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACTGCCAGCGAGCTATCTaGTCGATGCTCTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHCQRAI*SMLSSL
Trigger: CAAGCTGGAGAGCATCGACAAGATAGCTCGCTGGCA...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACCATCTCCTTGTCCTCTaGCACCCGCCTCCTTTCATC +
Preference number: 5 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHHLLVL*HPPPFI
Trigger: GATGAAAGGAGGCGGGTGCAAGAGGACAAGGAGATG...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCACATCTCCTTGTCCTCTaGCACCCGCCTCCTTTCATC +
Preference number: 5 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPHLLVL*HPPPFI
Trigger: GATGAAAGGAGGCGGGTGCAAGAGGACAAGGAGATG...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGCATCTCCTTGTCCTCTaGCACCCGCCTCCTTTCATC +
Preference number: 5 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRHLLVL*HPPPFI
Trigger: GATGAAAGGAGGCGGGTGCAAGAGGACAAGGAGATG...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACCATCTCCTTGTCCTCTaGCACCCGCCTCCTTTCATC +
Preference number: 5 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNHLLVL*HPPPFI
Trigger: GATGAAAGGAGGCGGGTGCAAGAGGACAAGGAGATG...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAATCCATTCCCATCTCCTaGTCCTCTTGCACCCGCCTC +
Preference number: 5 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKSIPIS*SSCTRL
Trigger: GAGGCGGGTGCAAGAGGACAAGGAGATGGGAATGGA...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCTCCATTCCCATCTCCTaGTCCTCTTGCACCCGCCTC +
Preference number: 5 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFSIPIS*SSCTRL
Trigger: GAGGCGGGTGCAAGAGGACAAGGAGATGGGAATGGA...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCAAGGGGGTGAGCCTGTaGAAGGTGTGCCAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFKGVSL*KVCQKS
Trigger: GCTCTTCTGGCACACCTTCAACAGGCTCACCCCCTT...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAAAGACAGTTCTTCTCTaGACACCCAGCTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: STQETKTVLLLTPSSMEAKTVLL*TPSSME
Trigger: TTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTT...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCACCTGCAGCAGGCACTaGCTCATCATCAGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFTCSRH*LIISRG
Trigger: ACCCCTGCTGATGATGAGCAAGTGCCTGCTGCAGGT...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATTGTGTCAACCCCGTCTaGACGGCATCCTTGAAAATC +
Preference number: 5 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHCVNPV*TASLKI
Trigger: GATTTTCAAGGATGCCGTCAAGACGGGGTTGACACA...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCACAGACACGTGCAGCATaGTGTCAACCCCGTCTTGAC +
Preference number: 5 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPQTRAA*CQPRLD
Trigger: GTCAAGACGGGGTTGACACAATGCTGCACGTGTCTG...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGAAAAGCAGTGGATTCTaGAGGATGCGTAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKKSSGF*RMRKLL
Trigger: GAGCAACTTACGCATCCTCAAGAATCCACTGCTTTT...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAGGCTCTCTGTTCCCTTTCTTTCCAAGTGGAACACGTGACTCAAATCAGGAAGGTCTTTGTGACTTCATaGCTAAGGACGATGTCAGGA +
Preference number: 5 (lower is better)
Translates to: EALCSLSFQVEHVTQIRKVFVTS*LRTMSG
Trigger: TCCTGACATCGTCCTTAGCAATGAAGTCACAAAGAC...CTTCCTGATTTGAGTCACGTGTTCCACTTGGAAAGAAAGGGAACAGAGAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACGAAAGGGCACCTCTCTaGCAGAGCCTGCCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHERAPL*QSLPSL
Trigger: TAGAGAAGGCAGGCTCTGCAAGAGAGGTGCCCTTTC...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TTCAAGAAGGAAACATACACACACACACCCCCACACATGCCACAGGACCTCTCCTTGAAAAGGTTGCTTTaGACCCAAGGCTACTTCAAT +
Preference number: 5 (lower is better)
Translates to: FKKETYTHTPPHMPQDLSLKRLL*TQGYFN
Trigger: ATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAA...GGAGAGGTCCTGTGGCATGTGTGGGGGTGTGTGTGTGTATGTTTCCTTCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTTTGAAAAGGTTGCTTTaGACCCAAGGCTACTTCAAT +
Preference number: 5 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSLKRLL*TQGYFN
Trigger: ATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAA...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCTCACAATTGAAAAGGTaGCTTTTGACCCAAGGCTAC +
Preference number: 5 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLSQLKR*LLTQGY
Trigger: GTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCGACTGGGACACCAAGTaGATCTGCATGAAGGAGTAT +
Preference number: 5 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVDWDTK*ICMKEY
Trigger: ATACTCCTTCATGCAGATCAACTTGGTGTCCCAGTC...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GATAAAGCTTTGTGTCATGACCGTCTCCTCCCTTCCACAAAGGCAGCTGGGTCTCTTCTTGACACTCCTTaGAGGGACAATTCTAAGTTT +
Preference number: 5 (lower is better)
Translates to: DKALCHDRLLPSTKAAGSLLDTP*RDNSKF
Trigger: AAACTTAGAATTGTCCCTCAAAGGAGTGTCAAGAAG...AGACCCAGCTGCCTTTGTGGAAGGGAGGAGACGGTCATGACACAAAGCTTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCATGTTGCCCAAAGCCTaGCAAAGTAGGTTAGCGAGT +
Preference number: 5 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSMLPKA*QSRLAS
Trigger: ACTCGCTAACCTACTTTGCAAGGCTTTGGGCAACAT...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGCTTGTACACTATACTTaGGCTGTCAACAGCAAATTC +
Preference number: 5 (lower is better)
Translates to: YSMWARCDFCSELLKACRLVHYT*AVNSKF
Trigger: GAATTTGCTGTTGACAGCCAAAGTATAGTGTACAAG...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS TCA 90 bp ACTTGTTATTGGTGTGCTTTGAGCCTCAAGTGGAATGATGATACATaGAAGCACCCTTTGACTTGTCCCACAGTGCCTGTCTTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: TCYWCALSLKWNDDT*KHPLTCPTVPVFCS
Trigger: GGAACAGAAGACAGGCACTGTGGGACAAGTCAAAGGGTGCTTTCATGTATCATCATTCCACTTGAGGCTCAAAGCACACCAATAACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488060.1
CDS-3UTR CAA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACTCCTCCTCACTACCGTaGTCATCCACTAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHSSSLP*SSTKAE
Trigger: CTCTGCCTTAGTGGATGACAACGGTAGTGAGGAGGA...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGATCCTCCTCACTACCGTaGTCATCCACTAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRSSSLP*SSTKAE
Trigger: CTCTGCCTTAGTGGATGACAACGGTAGTGAGGAGGA...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TACAGCATGTGGGCAAGATGTGATTTCTGCTCGGAGTTACTGAAGGCGTGCAGGAAAGCCCTCTTGATTTaGAAGAAAGCAAGATCCTAT +
Preference number: 5 (lower is better)
Translates to: YSMWARCDFCSELLKACRKALLI*KKARSY
Trigger: ATAGGATCTTGCTTTCTTCAAAATCAAGAGGGCTTT...CCTGCACGCCTTCAGTAACTCCGAGCAGAAATCACATCTTGCCCACATGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCAAAGAAATGTCTGTACTaGCCCTGCTTCATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSKKCLY*PCFMRL
Trigger: CAACCTCATGAAGCAGGGCAAGTACAGACATTTCTT...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp AGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAAAGAAATGTCTGTACTaGCCCTGCTTCATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: STQETKTVLLLTPSSMEAKKCLY*PCFMRL
Trigger: CAACCTCATGAAGCAGGGCAAGTACAGACATTTCTT...TGCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCTTGCGCTTGCGCTCGTaGATCAGACAGGCCACATTC +
Preference number: 5 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFLRLRS*IRQATF
Trigger: GAATGTGGCCTGTCTGATCAACGAGCGCAAGCGCAA...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATACCTGTTGTAGCCTTTaGACTTTCCATGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHTCCSL*TFHVLP
Trigger: AGGCAGGACATGGAAAGTCAAAAGGCTACAACAGGT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCAGGAGTATCAGCAATTaGGCTTGCAGAGATTTCCAC +
Preference number: 5 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSRSISN*ACRDFH
Trigger: GTGGAAATCTCTGCAAGCCAAATTGCTGATACTCCT...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACACTGGGACAGCGCCATTaGGGATGGACTTTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTLGQRH*GWTFPG
Trigger: GCCTGGGAAAGTCCATCCCAAATGGCGCTGTCCCAG...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGGGGTCACAGGAGTCTTaGCTCAACACATCCTGGACA +
Preference number: 5 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRGSQES*LNTSWT
Trigger: TGTCCAGGATGTGTTGAGCAAAGACTCCTGTGACCC...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGGTTGGGTCAGAAGATaGTCCAGTTCCTCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKGWVRR*SSSSVW
Trigger: CCAGACGGAGGAACTGGACAATCTTCTGACCCAACC...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS TCA 90 bp TTCTGTGGGTGGAGGAAGCCACCCTTATGGCTCTTAATCAAATGTTaGAAGTGTGCCCACAACAATGACTGGAACAAAGTGGAATCTTCA +
Preference number: 5 (lower is better)
Translates to: FCGWRKPPLWLLIKC*KCAHNNDWNKVESS
Trigger: TGAAGATTCCACTTTGTTCCAGTCATTGTTGTGGGCACACTTTCAACATTTGATTAAGAGCCATAAGGGTGGCTTCCTCCACCCACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS-3UTR CAA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACACACCACCAGTCCTTGTaGGAGGCTTCCAGAACCTGG +
Preference number: 5 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTHHQSL*EASRTW
Trigger: CCAGGTTCTGGAAGCCTCCAACAAGGACTGGTGGTG...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GAGGCGGGAGAGAGCAAGATTCCCAATGAAATTCATACACTGTCCATGGAGGAGAAAGCCCTCTTGATTTaGAAGAAAGCAAGATCCTAT +
Preference number: 5 (lower is better)
Translates to: EAGESKIPNEIHTLSMEEKALLI*KKARSY
Trigger: ATAGGATCTTGCTTTCTTCAAAATCAAGAGGGCTTT...CTCCTCCATGGACAGTGTATGAATTTCATTGGGAATCTTGCTCTCTCCCGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCGATGGCAAAGCCCTCTaGATTTTGAAGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSDGKAL*ILKKAR
Trigger: TCTTGCTTTCTTCAAAATCAAGAGGGCTTTGCCATC...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAAAAGAAATGTCTGTACTaGCCCTGCTTCATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKKKCLY*PCFMRL
Trigger: CAACCTCATGAAGCAGGGCAAGTACAGACATTTCTT...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACGTCCGCTGCTGGCTTTaGCCTTGCTTAGTGATTTTG +
Preference number: 5 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHVRCWL*PCLVIL
Trigger: CAAAATCACTAAGCAAGGCAAAAGCCAGCAGCGGAC...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCAGTCCGCTGCTGGCTTTaGCCTTGCTTAGTGATTTTG +
Preference number: 5 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPVRCWL*PCLVIL
Trigger: CAAAATCACTAAGCAAGGCAAAAGCCAGCAGCGGAC...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGGTCCTACTGACGAGCTaGAAGGCATTTTTCACGCTG +
Preference number: 5 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRVLLTS*KAFFTL
Trigger: CAGCGTGAAAAATGCCTTCAAGCTCGTCAGTAGGAC...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACGTCCTACTGACGAGCTaGAAGGCATTTTTCACGCTG +
Preference number: 5 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHVLLTS*KAFFTL
Trigger: CAGCGTGAAAAATGCCTTCAAGCTCGTCAGTAGGAC...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGCAGGAAGAGGAACCTaGCAGGATGACATTTGCACT +
Preference number: 5 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRAGRGT*QDDICT
Trigger: AGTGCAAATGTCATCCTGCAAGGTTCCTCTTCCTGC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS-3UTR CAA 90 bp CCTGAACATCCAAGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCATGGTTATGCCCTGTTaGGCTTTATATGTGATAAAG +
Preference number: 5 (lower is better)
Translates to: PEHPSRIHPGEIFNGVTLMVMPC*ALYVIK
Trigger: CTTTATCACATATAAAGCCAAACAGGGCATAACCAT...GAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACTTGGATGTTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCAGAAAGGGCACCTCTCTaGCAGAGCCTGCCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: LENKLGLATKCKPFLHYPERAPL*QSLPSL
Trigger: TAGAGAAGGCAGGCTCTGCAAGAGAGGTGCCCTTTC...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGAAGCAGGACTGCTTTGGCTGTCTTTGTGACTTCATTGCTAAGGACGATGTCCTGAAGAATACACCTTaGTCTCTGACATCACAGACT +
Preference number: 5 (lower is better)
Translates to: KKQDCFGCLCDFIAKDDVLKNTP*SLTSQT
Trigger: AGTCTGTGATGTCAGAGACAAAGGTGTATTCTTCAG...GACATCGTCCTTAGCAATGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATGGAAGCTATCAGCAATTTGGCTaGCAGAGATTTCCACCTGAT +
Preference number: 5 (lower is better)
Translates to: KHTRNKDSSSLDTQLHGSYQQFG*QRFPPD
Trigger: ATCAGGTGGAAATCTCTGCAAGCCAAATTGCTGATA...GCTTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCAAGTTCCTCCGTCTGGTaGGTCCCATACAAGCTGACC +
Preference number: 5 (lower is better)
Translates to: LENKLGLATKCKPFLHYPSSSVW*VPYKLT
Trigger: GGTCAGCTTGTATGGGACCAACCAGACGGAGGAACT...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACCATCTGAAGAAACGTaGGATGCTCTCATCTGCCGC +
Preference number: 5 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKPSEET*DALICR
Trigger: GCGGCAGATGAGAGCATCCAACGTTTCTTCAGATGG...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAACGCTTATTCACTGCTTaGACGTTGTATGCGTTCCCG +
Preference number: 5 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKRLFTA*TLYAFP
Trigger: CGGGAACGCATACAACGTCAAAGCAGTGAATAAGCG...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000399949.6
CDS-3UTR CAA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACCTACCATCCTTCTGTTaGGAAAACGGCAACCTTCAG +
Preference number: 5 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNLPSFC*ENGNLQ
Trigger: CTGAAGGTTGCCGTTTTCCAAACAGAAGGATGGTAG...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS-3UTR CAA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCACTGCTGGCTTTTGCCTaGCTTAGTGATTTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPLLAFA*LSDFGQ
Trigger: CTGACCAAAATCACTAAGCAAGGCAAAAGCCAGCAG...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACATTTTTCACGCTGAGGTaGCAGTCCTTGTCGCGCCCA +
Preference number: 5 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTFFTLR*QSLSRP
Trigger: TGGGCGCGACAAGGACTGCAACCTCAGCGTGAAAAA...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACCTGTTGTAGCCTTTaGACTTTCCATGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHTCCSL*TFHVLP
Trigger: AGGCAGGACATGGAAAGTCAAAAGGCTACAACAGGT...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAAAGACAGTTCTTCTCTaGACACCCAGCTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRKTVLL*TPSSME
Trigger: TTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTT...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAGACAGTTCTTCTCTaGACACCCAGCTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNKTVLL*TPSSME
Trigger: TTCCATGGAGCTGGGTGTCAAGAGAAGAACTGTCTT...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAAGTCTTGACGGCATCCTaGAAAATCAAATGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKVLTAS*KIKCRS
Trigger: ACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGAC...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACACAGACACGTGCAGCATaGTGTCAACCCCGTCTTGAC +
Preference number: 5 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTQTRAA*CQPRLD
Trigger: GTCAAGACGGGGTTGACACAATGCTGCACGTGTCTG...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCATTGAGCCTTCCATTCTaGAAGAACTCAGGCATGTGG +
Preference number: 5 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPLSLPF*KNSGMW
Trigger: CCACATGCCTGAGTTCTTCAAGAATGGAAGGCTCAA...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATTATCAGCAATTTGGCTaGCAGAGATTTCCACCTGAT +
Preference number: 5 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHYQQFG*QRFPPD
Trigger: ATCAGGTGGAAATCTCTGCAAGCCAAATTGCTGATA...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCTTTCACCTAGTTGACTaGGGTCCTCCATTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFFHLVD*GPPFLA
Trigger: GGCCAGAAATGGAGGACCCAAGTCAACTAGGTGAAA...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACATGTTGCCCAAAGCCTaGCAAAGTAGGTTAGCGAGT +
Preference number: 5 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNMLPKA*QSRLAS
Trigger: ACTCGCTAACCTACTTTGCAAGGCTTTGGGCAACAT...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCACCTTTGAACAGGCATTaGACCCCTCTCGGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: LENKLGLATKCKPFLHYPPLNRH*TPLGSE
Trigger: TTCAGAGCCGAGAGGGGTCAAATGCCTGTTCAAAGG...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGACCTTCTCTCCTTCATTGATCCCTAAAAGGAAGTTTTTATCACTGGGTCCAAAGAAATGTCTGTACTaGCCCTGCTTCATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: KTFSPSLIPKRKFLSLGPKKCLY*PCFMRL
Trigger: CAACCTCATGAAGCAGGGCAAGTACAGACATTTCTT...TGGACCCAGTGATAAAAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAAAGAAATGTCTGTACTaGCCCTGCTTCATGAGGTTG +
Preference number: 5 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRKKCLY*PCFMRL
Trigger: CAACCTCATGAAGCAGGGCAAGTACAGACATTTCTT...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACTGCTGGCTTTTGCCTaGCTTAGTGATTTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKLLAFA*LSDFGQ
Trigger: CTGACCAAAATCACTAAGCAAGGCAAAAGCCAGCAG...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CTGGAAAATAAATTAGGACTGGCCACAAAATGCAAACCATTTCTTCATTACCCATTCTCTCCACTTTGCTaGCAGGAAGAGGAACCTTGC +
Preference number: 5 (lower is better)
Translates to: LENKLGLATKCKPFLHYPFSPLC*QEEEPC
Trigger: GCAAGGTTCCTCTTCCTGCAAGCAAAGTGGAGAGAA...TGGGTAATGAAGAAATGGTTTGCATTTTGTGGCCAGTCCTAATTTATTTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCAGAAGCAGGACTGCTTaGGCTGTCTTTGTGACTTCA +
Preference number: 5 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFRSRTA*AVFVTS
Trigger: TGAAGTCACAAAGACAGCCAAAGCAGTCCTGCTTCT...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CCCGTCTTGACGGCATCCTTGAAAATCAAATGCAGAAGTGATCCTCTAACCTCAATGGTTATGCCCTGTTaGGCTTTATATGTGATAAAG +
Preference number: 5 (lower is better)
Translates to: PVLTASLKIKCRSDPLTSMVMPC*ALYVIK
Trigger: CTTTATCACATATAAAGCCAAACAGGGCATAACCAT...TGAGGTTAGAGGATCACTTCTGCATTTGATTTTCAAGGATGCCGTCAAGACGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAATCTGACATCACAGACTaGTTTATTCTCAAACATGGG +
Preference number: 5 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKSDITD*FILKHG
Trigger: CCCATGTTTGAGAATAAACAAGTCTGTGATGTCAGA...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTAGGATCCACCCAGGAGAGATCTTTAATGGAGTGACCCTCACACTCTATAAACAAGGTTATGTTTTCTaGATGCATGATGTCACTCTC +
Preference number: 5 (lower is better)
Translates to: SRIHPGEIFNGVTLTLYKQGYVF*MHDVTL
Trigger: GAGAGTGACATCATGCATCAAGAAAACATAACCTTG...TTTATAGAGTGTGAGGGTCACTCCATTAAAGATCTCTCCTGGGTGGATCCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS TCA 90 bp GGGTTGTTTATACATTCTGAACAAGTACTTGTTATTGGTGTGCTTTaGGCCTCAAGTGGAATGATGATACATGAAAGCACCCGTTGGATG +
Preference number: 5 (lower is better)
Translates to: GLFIHSEQVLVIGVL*ASSGMMIHESTRWM
Trigger: CATCCAACGGGTGCTTTCATGTATCATCATTCCACTTGAGGCTCAAAGCACACCAATAACAAGTACTTGTTCAGAATGTATAAACAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494772.5
CDS-3UTR CAA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATATTCTGAACAAGTACTaGTTATTGGTGTGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHILNKY*LLVCFE
Trigger: CTCAAAGCACACCAATAACAAGTACTTGTTCAGAAT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343003.10
CDS-3UTR CAA 90 bp GGATTGAAGCACACAAGAAACAAAGACAGTTCTTCTCTTGACACCCAGCTCCATAAAGCCCTCTTGATTTaGAAGAAAGCAAGATCCTAT +
Preference number: 5 (lower is better)
Translates to: GLKHTRNKDSSSLDTQLHKALLI*KKARSY
Trigger: ATAGGATCTTGCTTTCTTCAAAATCAAGAGGGCTTT...ATGGAGCTGGGTGTCAAGAGAAGAACTGTCTTTGTTTCTTGTGTGCTTCAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACGATGGCAAAGCCCTCTaGATTTTGAAGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHDGKAL*ILKKAR
Trigger: TCTTGCTTTCTTCAAAATCAAGAGGGCTTTGCCATC...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGAGATGGCAAAGCCCTCTaGATTTTGAAGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRDGKAL*ILKKAR
Trigger: TCTTGCTTTCTTCAAAATCAAGAGGGCTTTGCCATC...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCAAAAGCAGTGGATTCTaGAGGATGCGTAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFKSSGF*RMRKLL
Trigger: GAGCAACTTACGCATCCTCAAGAATCCACTGCTTTT...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTAATAGTGCAGAAATACTCCCCCTAACTCCAGGTAATTATGCTGTTCTATTCAGGAGTATCAGCAATTaGGCTTGCAGAGATTTCCAC +
Preference number: 5 (lower is better)
Translates to: SNSAEILPLTPGNYAVLFRSISN*ACRDFH
Trigger: GTGGAAATCTCTGCAAGCCAAATTGCTGATACTCCT...GAATAGAACAGCATAATTACCTGGAGTTAGGGGGAGTATTTCTGCACTATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS TCA 90 bp GGGTTGTTTATACATTCTGAACAAGTACTTGTTATTGGTGTGCTTTaGGCCTCAAGTGGAATGATGATACATGAAAGCACCCCAAGTGAA +
Preference number: 5 (lower is better)
Translates to: GLFIHSEQVLVIGVL*ASSGMMIHESTPSE
Trigger: TTCACTTGGGGTGCTTTCATGTATCATCATTCCACTTGAGGCTCAAAGCACACCAATAACAAGTACTTGTTCAGAATGTATAAACAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000454083.1
CDS TCA 90 bp ACCCTTATGGCTCTTAATCAAATGTTGAAAGTGTGCCCACAACAATaGCTGGAACAAAGTGGAATCTTCAGAATTGCGATGCAGATAAAG +
Preference number: 5 (lower is better)
Translates to: TLMALNQMLKVCPQQ*LEQSGIFRIAMQIK
Trigger: CTTTATCTGCATCGCAATTCTGAAGATTCCACTTTGTTCCAGTCATTGTTGTGGGCACACTTTCAACATTTGATTAAGAGCCATAAGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS-3UTR CAA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGATGGCAAAGCCCTCTaGATTTTGAAGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKDGKAL*ILKKAR
Trigger: TCTTGCTTTCTTCAAAATCAAGAGGGCTTTGCCATC...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp TCACAATTGAAAAGGTTGCTTTTGACCCAAGGCTACTTCAATTATCTTCTAACAACCTGTTGTAGCCTTTaGACTTTCCATGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: SQLKRLLLTQGYFNYLLTTCCSL*TFHVLP
Trigger: AGGCAGGACATGGAAAGTCAAAAGGCTACAACAGGT...TGTTAGAAGATAATTGAAGTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp CTAAAAGGAAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACCAAGGTTATGTTTTCTaGATGCATGATGTCACTCTC +
Preference number: 5 (lower is better)
Translates to: LKGSFYHWVQETFPGLKHQGYVF*MHDVTL
Trigger: GAGAGTGACATCATGCATCAAGAAAACATAACCTTG...GTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTTCCTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGACAAGGTTATGTTTTCTaGATGCATGATGTCACTCTC +
Preference number: 5 (lower is better)
Translates to: LSLGPRNFPWIEAHKKQRQGYVF*MHDVTL
Trigger: GAGAGTGACATCATGCATCAAGAAAACATAACCTTG...TCTTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAATCACAATTGAAAAGGTaGCTTTTGACCCAAGGCTAC +
Preference number: 5 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKSQLKR*LLTQGY
Trigger: GTAGCCTTGGGTCAAAAGCAACCTTTTCAATTGTGA...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACCTTCTTGACACTCCTTaGAGGGACAATTCTAAGTTT +
Preference number: 5 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNLLDTP*RDNSKF
Trigger: AAACTTAGAATTGTCCCTCAAAGGAGTGTCAAGAAG...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp ATGTACAACATAGACAAAGAAAAGGAGATGATTATCTGCAGGTGTCAGCCTAGGAAAGCCCTCTTGATTTaGAAGAAAGCAAGATCCTAT +
Preference number: 5 (lower is better)
Translates to: MYNIDKEKEMIICRCQPRKALLI*KKARSY
Trigger: ATAGGATCTTGCTTTCTTCAAAATCAAGAGGGCTTT...CCTAGGCTGACACCTGCAGATAATCATCTCCTTTTCTTTGTCTATGTTGTACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAAGCCCTCTTGATTTaGAAGAAAGCAAGATCCTAT +
Preference number: 5 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNKALLI*KKARSY
Trigger: ATAGGATCTTGCTTTCTTCAAAATCAAGAGGGCTTT...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAACCTTCTCTCCTTCATaGATCCCTAAAAGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKTFSPS*IPKRKF
Trigger: AAACTTCCTTTTAGGGATCAATGAAGGAGAGAAGGT...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS-3UTR CAA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACTTCTTGACACTCCTTaGAGGGACAATTCTAAGTTT +
Preference number: 5 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKLLDTP*RDNSKF
Trigger: AAACTTAGAATTGTCCCTCAAAGGAGTGTCAAGAAG...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAACTTGTACACTATACTTaGGCTGTCAACAGCAAATTC +
Preference number: 5 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKLVHYT*AVNSKF
Trigger: GAATTTGCTGTTGACAGCCAAAGTATAGTGTACAAG...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACCAAGTTACATCAATCTaGTACACTATACTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SFYHWVQETFPGLKHTRNQVTSI*YTILWL
Trigger: CAGCCAAAGTATAGTGTACAAGATTGATGTAACTTG...GTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp AAGTTTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAAATGGTTATGCCCTGTTaGGCTTTATATGTGATAAAG +
Preference number: 5 (lower is better)
Translates to: KFLSLGPRNFPWIEAHKKMVMPC*ALYVIK
Trigger: CTTTATCACATATAAAGCCAAACAGGGCATAACCAT...TTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS-3UTR CAA 90 bp TTTTATCACTGGGTCCAAGAAACTTTCCCTGGATTGAAGCACACAAGAAACAAACAAGTTACATCAATCTaGTACACTATACTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: FYHWVQETFPGLKHTRNKQVTSI*YTILWL
Trigger: CAGCCAAAGTATAGTGTACAAGATTGATGTAACTTG...TTTGTTTCTTGTGTGCTTCAATCCAGGGAAAGTTTCTTGGACCCAGTGATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS CCA 72 bp GCGGAGCCCCGAGGTCGCCGCACTCTCGGAGGAGCCTaGGATCCAGTGCGCGCCCTCGGAGCTAGCGACCGG +
Preference number: 6 (lower is better)
Translates to: AEPRGRRTLGGA*DPVRALGASDR
Trigger: CCGGTCGCTAGCTCCGAGGGCGCGCACTGGATCCCAGGCTCCTCCGAGAGTGCGGCGACCTCGGGGCTCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000466831.2
CDS CCA 72 bp CCGCCCCGCCCCGCCTGCTGTCCTGCTCAGTGCTCCTaGAGACGCGGCGGGAGTAGTCGTCATGCAGCCGGC +
Preference number: 6 (lower is better)
Translates to: PPRPACCPAQCS*RRGGSSRHAAG
Trigger: GCCGGCTGCATGACGACTACTCCCGCCGCGTCTCCAGGAGCACTGAGCAGGACAGCAGGCGGGGCGGGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 72 bp GAGGTCGCCGCACTCTCGGAGGAGCCTGGGATCCAGTaGGCGCCCTCGGAGCTAGCGACCGGCAGGGCGATC +
Preference number: 6 (lower is better)
Translates to: EVAALSEEPGIQ*APSELATGRAI
Trigger: GATCGCCCTGCCGGTCGCTAGCTCCGAGGGCGCGCACTGGATCCCAGGCTCCTCCGAGAGTGCGGCGACCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000466831.2
CDS GCA 72 bp TGTCCAACACGTCCCTGCCCTCAGAGCCACCTCCGGTaGCGGCGGAGCCCCGAGGTCGCCGCACTCTCGGAG +
Preference number: 6 (lower is better)
Translates to: CPTRPCPQSHLR*RRSPEVAALSE
Trigger: CTCCGAGAGTGCGGCGACCTCGGGGCTCCGCCGGCACCGGAGGTGGCTCTGAGGGCAGGGACGTGTTGGACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000466831.2
CDS GCA 72 bp GTGTCGCATGGTTCTGGGGCGCATCCAGCAGGCAGATaGGGCCCAGGCCGTAGGCTCTGCGGAGGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: VSHGSGAHPAGR*GPGRRLCGGCG
Trigger: CCCGCAGCCTCCGCAGAGCCTACGGCCTGGGCCGCATCTGCCTGCTGGATGCGCCCCAGAACCATGCGACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 72 bp GCTCTGCGGAGGCTGCGGGAGCGGTGTGTGCTCCGCTaGAAGGCATCGTCCGTGTCCTCGAGGTCGGAGCCA +
Preference number: 6 (lower is better)
Translates to: ALRRLRERCVLR*KASSVSSRSEP
Trigger: TGGCTCCGACCTCGAGGACACGGACGATGCCTTCCAGCGGAGCACACACCGCTCCCGCAGCCTCCGCAGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 72 bp GCGGGCACCTGGCCAGTGGCTATCGTGGGTGTCGCATaGTTCTGGGGCGCATCCAGCAGGCAGATGCGGCCC +
Preference number: 6 (lower is better)
Translates to: AGTWPVAIVGVA*FWGASSRQMRP
Trigger: GGGCCGCATCTGCCTGCTGGATGCGCCCCAGAACCATGCGACACCCACGATAGCCACTGGCCAGGTGCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 90 bp CAGGCCTTCATCTCCAGGAATGCCGTCCTGGCACTCACACCTGCCTaGCACATCGGGCTCCTGGGTGGCCACGGGCTCCTGCGGCGCCTC +
Preference number: 6 (lower is better)
Translates to: QAFISRNAVLALTPA*HIGLLGGHGLLRRL
Trigger: GAGGCGCCGCAGGAGCCCGTGGCCACCCAGGAGCCCGATGTGCAAGGCAGGTGTGAGTGCCAGGACGGCATTCCTGGAGATGAAGGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000466831.2
CDS CCA 72 bp ACCTGGCCAGTGGCTATCGTGGGTGTCGCATGGTTCTaGGGCGCATCCAGCAGGCAGATGCGGCCCAGGCCG +
Preference number: 6 (lower is better)
Translates to: TWPVAIVGVAWF*GASSRQMRPRP
Trigger: CGGCCTGGGCCGCATCTGCCTGCTGGATGCGCCCCAGAACCATGCGACACCCACGATAGCCACTGGCCAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 72 bp GCTGCTGGCTCTGAGCACGGCTCCTCCCGTCCATCCTaGCTGACACCTGCCGATCCATCCTGGGCCCTCTCC +
Preference number: 6 (lower is better)
Translates to: AAGSEHGSSRPS*LTPADPSWALS
Trigger: GGAGAGGGCCCAGGATGGATCGGCAGGTGTCAGCCAGGATGGACGGGAGGAGCCGTGCTCAGAGCCAGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488060.1
CDS TCA 72 bp GGTCGGAGCCATCCAATGTGCCCCACTCTGCTGGCCTaGGGGCACCACATGCTGGTCCCGGTGCTAAGGGGG +
Preference number: 6 (lower is better)
Translates to: GRSHPMCPTLLA*GHHMLVPVLRG
Trigger: CCCCCTTAGCACCGGGACCAGCATGTGGTGCCCTCAGGCCAGCAGAGTGGGGCACATTGGATGGCTCCGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 72 bp CACCACATGCTGGTCCCGGTGCTAAGGGGGAGCCCCTaGTTGCCTGGGCTCCTGGGACAGCGCCATTTGGGA +
Preference number: 6 (lower is better)
Translates to: HHMLVPVLRGSP*LPGLLGQRHLG
Trigger: TCCCAAATGGCGCTGTCCCAGGAGCCCAGGCAAGCAGGGGCTCCCCCTTAGCACCGGGACCAGCATGTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 72 bp GTCCTCGAGGTCGGAGCCATCCAATGTGCCCCACTCTaGTGGCCTGAGGGCACCACATGCTGGTCCCGGTGC +
Preference number: 6 (lower is better)
Translates to: VLEVGAIQCAPL*WPEGTTCWSRC
Trigger: GCACCGGGACCAGCATGTGGTGCCCTCAGGCCAGCAGAGTGGGGCACATTGGATGGCTCCGACCTCGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 72 bp GACGCGGCGGGAGTAGTCGTCATGCAGCCGGCTGTGTaGCTGAAGTCTCAGGCTGGCCTCTCCAGGGGATGG +
Preference number: 6 (lower is better)
Translates to: DAAGVVVMQPAV*LKSQAGLSRGW
Trigger: CCATCCCCTGGAGAGGCCAGCCTGAGACTTCAGGCACACAGCCGGCTGCATGACGACTACTCCCGCCGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 72 bp ACCTGCTGCTGGGGGACGCTTGTGGGCATAGTGATGTaGCGCTGGTGGATGGGGTGCAGGCCCTGGTGCGGT +
Preference number: 6 (lower is better)
Translates to: TCCWGTLVGIVM*RWWMGCRPWCG
Trigger: ACCGCACCAGGGCCTGCACCCCATCCACCAGCGCCACATCACTATGCCCACAAGCGTCCCCCAGCAGCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS CCA 72 bp TTCCATGTGGAGGAGTTCCCCACCAGGACCATGGAGTaGGGCCGCTCGGGGTGGGCACCCGTCCTCTTCCGA +
Preference number: 6 (lower is better)
Translates to: FHVEEFPTRTME*GRSGWAPVLFR
Trigger: TCGGAAGAGGACGGGTGCCCACCCCGAGCGGCCCCACTCCATGGTCCTGGTGGGGAACTCCTCCACATGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 72 bp GTGTGCCTGAAGTCTCAGGCTGGCCTCTCCAGGGGATaGGGCCCCACTCCTAGGACTCTCCCTCCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: VCLKSQAGLSRG*GPTPRTLPPPG
Trigger: GCCTGGAGGAGGGAGAGTCCTAGGAGTGGGGCCCCATCCCCTGGAGAGGCCAGCCTGAGACTTCAGGCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 72 bp GGCCAGCTGGCCGTAGTCAGAGAATGGCCGAGGCCTTaGCCGTCTCCCAGAGCCCCATCTCCTCTTGGGGGT +
Preference number: 6 (lower is better)
Translates to: GQLAVVREWPRP*PSPRAPSPLGG
Trigger: ACCCCCAAGAGGAGATGGGGCTCTGGGAGACGGCCAAGGCCTCGGCCATTCTCTGACTACGGCCAGCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000474317.1
CDS CAA 72 bp TGGCCAGCTGGCCGTAGTCAGAGAATGGCCGAGGCCTaGGCCGTCTCCCAGAGCCCCATCTCCTCTTGGGGG +
Preference number: 6 (lower is better)
Translates to: WPAGRSQRMAEA*AVSQSPISSWG
Trigger: CCCCCAAGAGGAGATGGGGCTCTGGGAGACGGCCAAGGCCTCGGCCATTCTCTGACTACGGCCAGCTGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000474317.1
CDS GCA 72 bp ACGTTGCCATCACTGATCAGCTCATTGATGGCCAGCTaGTCCCCGCCGGGCTGCAGGTACCGAGGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: TLPSLISSLMAS*SPPGCRYRGLA
Trigger: GGCCAGCCCTCGGTACCTGCAGCCCGGCGGGGAGCAGCTGGCCATCAATGAGCTGATCAGTGATGGCAACGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
ENST00000454083.1
CDS GCA 72 bp CTTCATCTCCAGGAATGCCGTCCTGGCACTCACACCTaGCTTGCACATCGGGCTCCTGGGTGGCCACGGGCG +
Preference number: 6 (lower is better)
Translates to: LHLQECRPGTHT*LAHRAPGWPRA
Trigger: CGCCCGTGGCCACCCAGGAGCCCGATGTGCAAGGCAGGTGTGAGTGCCAGGACGGCATTCCTGGAGATGAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS CCA 72 bp GGCGGCTCTGGCTGGCCTCCTCGTCCTGCTCCTCACTaGGGGTGCTGCTGGAGTTTTCCGACAGCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: GGSGWPPRPAPH*GCCWSFPTALP
Trigger: AGGAAGAGCTGTCGGAAAACTCCAGCAGCACCCCCAGTGAGGAGCAGGACGAGGAGGCCAGCCAGAGCCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS CCA 72 bp AGGCGCACAAGCTTGGCTGGGCTGAGTTTGGCTTCCTaGGTGTCCGTGTCGCCACCAGGGCTGCAGCCACAG +
Preference number: 6 (lower is better)
Translates to: RRTSLAGLSLAS*VSVSPPGLQPQ
Trigger: CTGTGGCTGCAGCCCTGGTGGCGACACGGACACCCAGGAAGCCAAACTCAGCCCAGCCAAGCTTGTGCGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 72 bp GCTGGTCCCGGTGCTAAGGGGGAGCCCCTGCTTGCCTaGGCTCCTGGGACAGCGCCATTTGGGATGGACTTT +
Preference number: 6 (lower is better)
Translates to: AGPGAKGEPLLA*APGTAPFGMDF
Trigger: AAAGTCCATCCCAAATGGCGCTGTCCCAGGAGCCCAGGCAAGCAGGGGCTCCCCCTTAGCACCGGGACCAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 72 bp CAGGGGCCATCAGGGACGACCTCCTGCGGCGCCTCTTaGCGGAGCCTACAAAGTCAGCGTGTCCAACACGTC +
Preference number: 6 (lower is better)
Translates to: QGPSGTTSCGAS*RSLQSQRVQHV
Trigger: GACGTGTTGGACACGCTGACTTTGTAGGCTCCGCCAAGAGGCGCCGCAGGAGGTCGTCCCTGATGGCCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382095.8
CDS CAA 72 bp ATCTCCAGGAATGCCGTCCTGGCACTCACACCTGCCTaGCACATCGGGCTCCTGGGTGGCCACGGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: ISRNAVLALTPA*HIGLLGGHGLL
Trigger: CAGGAGCCCGTGGCCACCCAGGAGCCCGATGTGCAAGGCAGGTGTGAGTGCCAGGACGGCATTCCTGGAGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000466831.2
CDS CAA 72 bp CCAGGGGCCATCAGGGACGACCTCCTGCGGCGCCTCTaGGCGGAGCCTACAAAGTCAGCGTGTCCAACACGT +
Preference number: 6 (lower is better)
Translates to: PGAIRDDLLRRL*AEPTKSACPTR
Trigger: ACGTGTTGGACACGCTGACTTTGTAGGCTCCGCCAAGAGGCGCCGCAGGAGGTCGTCCCTGATGGCCCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382095.8
CDS CAA 90 bp AACTGCGGCTGGCCAGCTGGCCGTAGTCAGAGAATGGCCGAGGCCTaGGCCGTCTCCCAGAGCCCCATCTCCTCTTGGGGGTTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: NCGWPAGRSQRMAEA*AVSQSPISSWGFSV
Trigger: CACAGAGAACCCCCAAGAGGAGATGGGGCTCTGGGAGACGGCCAAGGCCTCGGCCATTCTCTGACTACGGCCAGCTGGCCAGCCGCAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000474317.1
CDS TCA 72 bp CACGGTCCAACCCAATGGGGGTGCTCTGGGAGAATGTaGAGGGCCGGAACCGGGCCGACACAGCCTTGTAGG +
Preference number: 6 (lower is better)
Translates to: HGPTQWGCSGRM*RAGTGPTQPCR
Trigger: CCTACAAGGCTGTGTCGGCCCGGTTCCGGCCCTTCACATTCTCCCAGAGCACCCCCATTGGGTTGGACCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
ENST00000434675.5
ENST00000494772.5
CDS GCA 72 bp CTTCATCTCCAGGAATGCCGTCCTGGCACTCACACCTaGCTTGCACATCGGGCTCCTGGGTGGCCACGGGCT +
Preference number: 6 (lower is better)
Translates to: LHLQECRPGTHT*LAHRAPGWPRA
Trigger: AGCCCGTGGCCACCCAGGAGCCCGATGTGCAAGGCAGGTGTGAGTGCCAGGACGGCATTCCTGGAGATGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382108.8
ENST00000466831.2
CDS CCA 72 bp GGGTCCCTCACGAGAATCTCACACACGGCGGGCACCTaGCCAGTGGCTATCGTGGGTGTCGCATGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: GSLTRISHTAGT*PVAIVGVAWFW
Trigger: CCAGAACCATGCGACACCCACGATAGCCACTGGCCAGGTGCCCGCCGTGTGTGAGATTCTCGTGAGGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 72 bp GGCTCTGGGGCTTGGGTGTGGTGGGCCTTAGAGGGGTaGGAGGCTGCTCAGGGTCAAATGTCAACTGGCTGC +
Preference number: 6 (lower is better)
Translates to: GSGAWVWWALEG*EAAQGQMSTGC
Trigger: GCAGCCAGTTGACATTTGACCCTGAGCAGCCTCCCACCCCTCTAAGGCCCACCACACCCAAGCCCCAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
ENST00000474317.1
CDS CAA 72 bp AGCCCCTGCTTGCCTGGGCTCCTGGGACAGCGCCATTaGGGATGGACTTTCCCAGGCCATGCTCCGAAGCCT +
Preference number: 6 (lower is better)
Translates to: SPCLPGLLGQRH*GWTFPGHAPKP
Trigger: AGGCTTCGGAGCATGGCCTGGGAAAGTCCATCCCAAATGGCGCTGTCCCAGGAGCCCAGGCAAGCAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 72 bp ATCTCCAGGAATGCCGTCCTGGCACTCACACCTGCCTaGCACATCGGGCTCCTGGGTGGCCACGGGCGAGTT +
Preference number: 6 (lower is better)
Translates to: ISRNAVLALTPA*HIGLLGGHGRV
Trigger: AACTCGCCCGTGGCCACCCAGGAGCCCGATGTGCAAGGCAGGTGTGAGTGCCAGGACGGCATTCCTGGAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS CAA 90 bp CTGCAGCCACAGACTCCATTTCCACACGCAAGGGAGGTCACCATCTaGGCGTCTTTCAGGTCCGAGCCTGCACAGGGGGCTGCGGGGCCT +
Preference number: 6 (lower is better)
Translates to: LQPQTPFPHAREVTI*ASFRSEPAQGAAGP
Trigger: AGGCCCCGCAGCCCCCTGTGCAGGCTCGGACCTGAAAGACGCCAAGATGGTGACCTCCCTTGCGTGTGGAAATGGAGTCTGTGGCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 90 bp CTAAGGGGGAGCCCCTGCTTGCCTGGGCTCCTGGGACAGCGCCATTaGGGATGGACTTTCCCAGGCCATGCTCCGAAGCCTCTCCCTTTG +
Preference number: 6 (lower is better)
Translates to: LRGSPCLPGLLGQRH*GWTFPGHAPKPLPL
Trigger: CAAAGGGAGAGGCTTCGGAGCATGGCCTGGGAAAGTCCATCCCAAATGGCGCTGTCCCAGGAGCCCAGGCAAGCAGGGGCTCCCCCTTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 90 bp CAGGCCTTCATCTCCAGGAATGCCGTCCTGGCACTCACACCTGCCTaGCACATCGGGCTCCTGGGTGGCCACGGGCGAGTTTCTGCACCA +
Preference number: 6 (lower is better)
Translates to: QAFISRNAVLALTPA*HIGLLGGHGRVSAP
Trigger: TGGTGCAGAAACTCGCCCGTGGCCACCCAGGAGCCCGATGTGCAAGGCAGGTGTGAGTGCCAGGACGGCATTCCTGGAGATGAAGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS CAA 90 bp TTCCGACTGGTGGAAAAGAGGCGCACAAGCTTGGCTGGGCTGAGTTaGGCTTCCTGGGTGTCCGTGTCGCCACCAGGGCTGCAGCCACAG +
Preference number: 6 (lower is better)
Translates to: FRLVEKRRTSLAGLS*ASWVSVSPPGLQPQ
Trigger: CTGTGGCTGCAGCCCTGGTGGCGACACGGACACCCAGGAAGCCAAACTCAGCCCAGCCAAGCTTGTGCGCCTCTTTTCCACCAGTCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 72 bp GACTTCCTCTTGGGTTCCGCCAGGCCAAAGACCTGCTaGTGGGGGACGCTTGTGGGCATAGTGATGTGGCGC +
Preference number: 6 (lower is better)
Translates to: DFLLGSARPKTC*WGTLVGIVMWR
Trigger: GCGCCACATCACTATGCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCTGGCGGAACCCAAGAGGAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS GCA 72 bp GTTTGGCTTCCTGGGTGTCCGTGTCGCCACCAGGGCTaGAGCCACAGACTCCATTTCCACACGCAAGGGAGG +
Preference number: 6 (lower is better)
Translates to: VWLPGCPCRHQG*SHRLHFHTQGR
Trigger: CCTCCCTTGCGTGTGGAAATGGAGTCTGTGGCTGCAGCCCTGGTGGCGACACGGACACCCAGGAAGCCAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 72 bp ATCTGCTGCTTGTTCTCACAGTGTCTGTGGCGGCTCTaGCTGGCCTCCTCGTCCTGCTCCTCACTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: ICCLFSQCLWRL*LASSSCSSLGV
Trigger: CACCCCCAGTGAGGAGCAGGACGAGGAGGCCAGCCAGAGCCGCCACAGACACTGTGAGAACAAGCAGCAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS CCA 72 bp TGCTTGCCTGGGCTCCTGGGACAGCGCCATTTGGGATaGACTTTCCCAGGCCATGCTCCGAAGCCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: CLPGLLGQRHLG*TFPGHAPKPLP
Trigger: AGGGAGAGGCTTCGGAGCATGGCCTGGGAAAGTCCATCCCAAATGGCGCTGTCCCAGGAGCCCAGGCAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 72 bp TGGGGCAGCCCACTGGAGCATTCTGGTCTTCAGGGCTaGCAGAAGTCATGCTTGCCTGGGGGTCCTCGTCCA +
Preference number: 6 (lower is better)
Translates to: WGSPLEHSGLQG*QKSCLPGGPRP
Trigger: TGGACGAGGACCCCCAGGCAAGCATGACTTCTGCCAGCCCTGAAGACCAGAATGCTCCAGTGGGCTGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS CCA 72 bp CTATCACGGAAATGGGGCGCCTTCTCCGGGCTCCTTTaGGGCAGCCCACTGGAGCATTCTGGTCTTCAGGGC +
Preference number: 6 (lower is better)
Translates to: LSRKWGAFSGLL*GSPLEHSGLQG
Trigger: GCCCTGAAGACCAGAATGCTCCAGTGGGCTGCCCCAAAGGAGCCCGGAGAAGGCGCCCCATTTCCGTGATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS CAA 72 bp GTGGAAAAGAGGCGCACAAGCTTGGCTGGGCTGAGTTaGGCTTCCTGGGTGTCCGTGTCGCCACCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: VEKRRTSLAGLS*ASWVSVSPPGL
Trigger: CAGCCCTGGTGGCGACACGGACACCCAGGAAGCCAAACTCAGCCCAGCCAAGCTTGTGCGCCTCTTTTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 72 bp CCTATCACGGAAATGGGGCGCCTTCTCCGGGCTCCTTaGGGGCAGCCCACTGGAGCATTCTGGTCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: PITEMGRLLRAP*GQPTGAFWSSG
Trigger: CCCTGAAGACCAGAATGCTCCAGTGGGCTGCCCCAAAGGAGCCCGGAGAAGGCGCCCCATTTCCGTGATAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS CAA 90 bp AGCCCACTGGAGCATTCTGGTCTTCAGGGCTGGCAGAAGTCATGCTaGCCTGGGGGTCCTCGTCCACACGGTCTTCCTTCTGGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: SPLEHSGLQGWQKSC*PGGPRPHGLPSGGL
Trigger: CAGACCCCCAGAAGGAAGACCGTGTGGACGAGGACCCCCAGGCAAGCATGACTTCTGCCAGCCCTGAAGACCAGAATGCTCCAGTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS TCA 72 bp CCCCACTGCAGGCTGGGCAAGGATCCACAACCTTCGTaGGCCCCCTTGAAGCTGAGGACTGGAATGGCTGCT +
Preference number: 6 (lower is better)
Translates to: PHCRLGKDPQPS*APLKLRTGMAA
Trigger: AGCAGCCATTCCAGTCCTCAGCTTCAAGGGGGCTCACGAAGGTTGTGGATCCTTGCCCAGCCTGCAGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS TCA 72 bp TCTCTGGGCTGGTGTCTCGTCAGCCCTCCCAGTTTCTaGCGGCTGCCCAACTGGCTGGACAGACCTGAGCAA +
Preference number: 6 (lower is better)
Translates to: SLGWCLVSPPSF*RLPNWLDRPEQ
Trigger: TTGCTCAGGTCTGTCCAGCCAGTTGGGCAGCCGTCAGAAACTGGGAGGGCTGACGAGACACCAGCCCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488060.1
CDS GCA 72 bp GAGGACTTCCTCTTGGGTTCCGCCAGGCCAAAGACCTaGTGCTGGGGGACGCTTGTGGGCATAGTGATGTGG +
Preference number: 6 (lower is better)
Translates to: EDFLLGSARPKT*CWGTLVGIVMW
Trigger: CCACATCACTATGCCCACAAGCGTCCCCCAGCAGCAGGTCTTTGGCCTGGCGGAACCCAAGAGGAAGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS GCA 72 bp GCTGGTGTCTCGTCAGCCCTCCCAGTTTCTGACGGCTaGCCAACTGGCTGGACAGACCTGAGCAATCACCCA +
Preference number: 6 (lower is better)
Translates to: AGVSSALPVSDG*PTGWTDLSNHP
Trigger: TGGGTGATTGCTCAGGTCTGTCCAGCCAGTTGGGCAGCCGTCAGAAACTGGGAGGGCTGACGAGACACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488060.1
CDS CCA 72 bp TTGGTCCGCATCTGCTGCTTGTTCTCACAGTGTCTGTaGCGGCTCTGGCTGGCCTCCTCGTCCTGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: LVRICCLFSQCL*RLWLASSSCSS
Trigger: TGAGGAGCAGGACGAGGAGGCCAGCCAGAGCCGCCACAGACACTGTGAGAACAAGCAGCAGATGCGGACCAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS CCA 72 bp CTTCCGACTGGTGGAAAAGAGGCGCACAAGCTTGGCTaGGCTGAGTTTGGCTTCCTGGGTGTCCGTGTCGCC +
Preference number: 6 (lower is better)
Translates to: LPTGGKEAHKLG*AEFGFLGVRVA
Trigger: GGCGACACGGACACCCAGGAAGCCAAACTCAGCCCAGCCAAGCTTGTGCGCCTCTTTTCCACCAGTCGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 72 bp GAACTGCTCAGGGTCCTCTGTGGTACCCGTGCGTCATaGGCCGTCCTGAGGTCTGCAAGATTGGAGGTGGAC +
Preference number: 6 (lower is better)
Translates to: ELLRVLCGTRAS*AVLRSARLEVD
Trigger: GTCCACCTCCAATCTTGCAGACCTCAGGACGGCCCATGACGCACGGGTACCACAGAGGACCCTGAGCAGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 72 bp TTCTGGTCTTCAGGGCTGGCAGAAGTCATGCTTGCCTaGGGGTCCTCGTCCACACGGTCTTCCTTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: FWSSGLAEVMLA*GSSSTRSSFWG
Trigger: CCCCCAGAAGGAAGACCGTGTGGACGAGGACCCCCAGGCAAGCATGACTTCTGCCAGCCCTGAAGACCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS CCA 72 bp TCCACAACCTTCGTGAGCCCCCTTGAAGCTGAGGACTaGAATGGCTGCTGTGTGCCCGGGTTCTCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: STTFVSPLEAED*NGCCVPGFSSG
Trigger: CCCTGAGGAGAACCCGGGCACACAGCAGCCATTCCAGTCCTCAGCTTCAAGGGGGCTCACGAAGGTTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS CCA 72 bp TCAGCCCTCCCAGTTTCTGACGGCTGCCCAACTGGCTaGACAGACCTGAGCAATCACCCATCCGGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: SALPVSDGCPTG*TDLSNHPSGFL
Trigger: CAGGAAGCCGGATGGGTGATTGCTCAGGTCTGTCCAGCCAGTTGGGCAGCCGTCAGAAACTGGGAGGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488060.1
CDS GCA 72 bp TCTGGCTGGCCTCCTCGTCCTGCTCCTCACTGGGGGTaGTGCTGGAGTTTTCCGACAGCTCTTCCTGATTCA +
Preference number: 6 (lower is better)
Translates to: SGWPPRPAPHWG*CWSFPTALPDS
Trigger: TGAATCAGGAAGAGCTGTCGGAAAACTCCAGCAGCACCCCCAGTGAGGAGCAGGACGAGGAGGCCAGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000424834.6
CDS GCA 72 bp AGTGGAGGAACTGCTCAGGGTCCTCTGTGGTACCCGTaGGTCATGGGCCGTCCTGAGGTCTGCAAGATTGGA +
Preference number: 6 (lower is better)
Translates to: SGGTAQGPLWYP*VMGRPEVCKIG
Trigger: TCCAATCTTGCAGACCTCAGGACGGCCCATGACGCACGGGTACCACAGAGGACCCTGAGCAGTTCCTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 72 bp CACTTTCCTCTGAATTCGCGGACAGGGCACTGTGATTaGTGTGACAGCTGGCACTTCCTGCCCCGGGGCTCT +
Preference number: 6 (lower is better)
Translates to: HFPLNSRTGHCD*CDSWHFLPRGS
Trigger: AGAGCCCCGGGGCAGGAAGTGCCAGCTGTCACAGCAATCACAGTGCCCTGTCCGCGAATTCAGAGGAAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
ENST00000474317.1
CDS GCA 72 bp GGCCGGCTGCCACACCAATGTTCACCAGAAGGTCCTTaGTGCCCTCATCACCATGTGTGGCTTCCAGGGGAT +
Preference number: 6 (lower is better)
Translates to: GRLPHQCSPEGP*CPHHHVWLPGD
Trigger: ATCCCCTGGAAGCCACACATGGTGATGAGGGCAGCAAGGACCTTCTGGTGAACATTGGTGTGGCAGCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
ENST00000474317.1
CDS GCA 72 bp CTGGAGCATTCTGGTCTTCAGGGCTGGCAGAAGTCATaGTTGCCTGGGGGTCCTCGTCCACACGGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: LEHSGLQGWQKS*LPGGPRPHGLP
Trigger: AGGAAGACCGTGTGGACGAGGACCCCCAGGCAAGCATGACTTCTGCCAGCCCTGAAGACCAGAATGCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS CCA 72 bp AGACTCCATTTCCACACGCAAGGGAGGTCACCATCTTaGCGTCTTTCAGGTCCGAGCCTGCACAGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: RLHFHTQGRSPS*RLSGPSLHRGL
Trigger: CAGCCCCCTGTGCAGGCTCGGACCTGAAAGACGCCAAGATGGTGACCTCCCTTGCGTGTGGAAATGGAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CCA 72 bp GTTTCAAGAGGAAATACGGCAGTGTCAGCGTCTAGGTaGGGCCCCTTAGAGGTGGCTGAGCCGAAACCGGGG +
Preference number: 6 (lower is better)
Translates to: VSRGNTAVSASR*GPLEVAEPKPG
Trigger: CCCCGGTTTCGGCTCAGCCACCTCTAAGGGGCCCCACCTAGACGCTGACACTGCCGTATTTCCTCTTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 72 bp CAGACTCCATTTCCACACGCAAGGGAGGTCACCATCTaGGCGTCTTTCAGGTCCGAGCCTGCACAGGGGGCT +
Preference number: 6 (lower is better)
Translates to: QTPFPHAREVTI*ASFRSEPAQGA
Trigger: AGCCCCCTGTGCAGGCTCGGACCTGAAAGACGCCAAGATGGTGACCTCCCTTGCGTGTGGAAATGGAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS TCA 72 bp AGGCTTCAAAGAAATGTCTGTACTTGCCCTGCTTCATaGGGTTGGCGAGCTCCAGGCAGGCGCCCGGGTGGT +
Preference number: 6 (lower is better)
Translates to: RLQRNVCTCPAS*GWRAPGRRPGG
Trigger: ACCACCCGGGCGCCTGCCTGGAGCTCGCCAACCTCATGAAGCAGGGCAAGTACAGACATTTCTTTGAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS GCA 72 bp CATCTCCTTGTCCTCTTGCACCCGCCTCCTTTCATCTaGACAGGCCTGCAGCCACCTCGCCTTGTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: HLLVLLHPPPFI*TGLQPPRLVFL
Trigger: CAAGAAGACAAGGCGAGGTGGCTGCAGGCCTGTGCAGATGAAAGGAGGCGGGTGCAAGAGGACAAGGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS GCA 72 bp TTCCTGACCCAAGCTTTTGGGAGTCAGTGGAGGAACTaGTCAGGGTCCTCTGTGGTACCCGTGCGTCATGGG +
Preference number: 6 (lower is better)
Translates to: FLTQAFGSQWRN*SGSSVVPVRHG
Trigger: CCCATGACGCACGGGTACCACAGAGGACCCTGAGCAGTTCCTCCACTGACTCCCAAAAGCTTGGGTCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 72 bp GACGACCTCCTCCTTCTCCTTTTCTTCTGGGCCGGCTaGCACACCAATGTTCACCAGAAGGTCCTTGCTGCC +
Preference number: 6 (lower is better)
Translates to: DDLLLLLFFWAG*HTNVHQKVLAA
Trigger: GGCAGCAAGGACCTTCTGGTGAACATTGGTGTGGCAGCCGGCCCAGAAGAAAAGGAGAAGGAGGAGGTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000474317.1
CDS GCA 72 bp GGGGTCCTCGTCCACACGGTCTTCCTTCTGGGGGTCTaGAGCAACCGAGTCTTCAGGAATAGACAAACTGCG +
Preference number: 6 (lower is better)
Translates to: GVLVHTVFLLGV*SNRVFRNRQTA
Trigger: CGCAGTTTGTCTATTCCTGAAGACTCGGTTGCTGCAGACCCCCAGAAGGAAGACCGTGTGGACGAGGACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS GCA 72 bp AGCATTCTGGTCTTCAGGGCTGGCAGAAGTCATGCTTaGCTGGGGGTCCTCGTCCACACGGTCTTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: SILVFRAGRSHA*LGVLVHTVFLL
Trigger: CAGAAGGAAGACCGTGTGGACGAGGACCCCCAGGCAAGCATGACTTCTGCCAGCCCTGAAGACCAGAATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS CCA 72 bp CTTCTGTTTGGAAAACGGCAACCTTCAGAGCAGGACTaGGGTGTGACCGAGGAGCCGGTCCCCAAGCATCAC +
Preference number: 6 (lower is better)
Translates to: LLFGKRQPSEQD*GVTEEPVPKHH
Trigger: GTGATGCTTGGGGACCGGCTCCTCGGTCACACCCCAGTCCTGCTCTGAAGGTTGCCGTTTTCCAAACAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS CCA 72 bp AGAGGGGTGGGAGGCTGCTCAGGGTCAAATGTCAACTaGCTGCCAGCGTTTGGGTCACAGGAGTCTTTGCTC +
Preference number: 6 (lower is better)
Translates to: RGVGGCSGSNVN*LPAFGSQESLL
Trigger: GAGCAAAGACTCCTGTGACCCAAACGCTGGCAGCCAGTTGACATTTGACCCTGAGCAGCCTCCCACCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
ENST00000474317.1
CDS CCA 72 bp GCCATCAGGGACGACCTCCTCCTTCTCCTTTTCTTCTaGGCCGGCTGCCACACCAATGTTCACCAGAAGGTC +
Preference number: 6 (lower is better)
Translates to: AIRDDLLLLLFF*AGCHTNVHQKV
Trigger: GACCTTCTGGTGAACATTGGTGTGGCAGCCGGCCCAGAAGAAAAGGAGAAGGAGGAGGTCGTCCCTGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000474317.1
CDS CAA 72 bp GAGCATTCTGGTCTTCAGGGCTGGCAGAAGTCATGCTaGCCTGGGGGTCCTCGTCCACACGGTCTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: EHSGLQGWQKSC*PGGPRPHGLPS
Trigger: AGAAGGAAGACCGTGTGGACGAGGACCCCCAGGCAAGCATGACTTCTGCCAGCCCTGAAGACCAGAATGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382095.8
ENST00000382108.8
ENST00000424834.6
CDS CAA 90 bp TCTGTGGTCCTACTGACGAGCTTGAAGGCATTTTTCACGCTGAGGTaGCAGTCCTTGTCGCGCCCATCCCCCAGGTCCACAAGCTCCATC +
Preference number: 6 (lower is better)
Translates to: SVVLLTSLKAFFTLR*QSLSRPSPRSTSSI
Trigger: GATGGAGCTTGTGGACCTGGGGGATGGGCGCGACAAGGACTGCAACCTCAGCGTGAAAAATGCCTTCAAGCTCGTCAGTAGGACCACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS CAA 90 bp TTTTCTTCTGGGCCGGCTGCCACACCAATGTTCACCAGAAGGTCCTaGCTGCCCTCATCACCATGTGTGGCTTCCAGGGGATCCTGCAAG +
Preference number: 6 (lower is better)
Translates to: FSSGPAATPMFTRRS*LPSSPCVASRGSCK
Trigger: CTTGCAGGATCCCCTGGAAGCCACACATGGTGATGAGGGCAGCAAGGACCTTCTGGTGAACATTGGTGTGGCAGCCGGCCCAGAAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
ENST00000474317.1
CDS TCA 72 bp GGGTGGCCACGGGCGAGTTTCTGCACCAGCTACTCTTaGAGACAAGCTCTTCACGGCCAGGATGTTTGTGAG +
Preference number: 6 (lower is better)
Translates to: GWPRASFCTSYS*RQALHGQDVCE
Trigger: CTCACAAACATCCTGGCCGTGAAGAGCTTGTCTTCAAGAGTAGCTGGTGCAGAAACTCGCCCGTGGCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424834.6
CDS GCA 72 bp TTTCATTTCCGGAAGGGGGTGAGCCTGTTGAAGGTGTaGCAGAAGAGCGAGGACTTCCTCTTGGGTTCCGCC +
Preference number: 6 (lower is better)
Translates to: FHFRKGVSLLKV*QKSEDFLLGSA
Trigger: GGCGGAACCCAAGAGGAAGTCCTCGCTCTTCTGGCACACCTTCAACAGGCTCACCCCCTTCCGGAAATGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS GCA 72 bp GGGACAGCGCCATTTGGGATGGACTTTCCCAGGCCATaGTCCGAAGCCTCTCCCTTTGAACAGGCATTTGAC +
Preference number: 6 (lower is better)
Translates to: GTAPFGMDFPRP*SEASPFEQAFD
Trigger: GTCAAATGCCTGTTCAAAGGGAGAGGCTTCGGAGCATGGCCTGGGAAAGTCCATCCCAAATGGCGCTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 72 bp GGGTGGGAGGCTGCTCAGGGTCAAATGTCAACTGGCTaGCAGCGTTTGGGTCACAGGAGTCTTTGCTCAACA +
Preference number: 6 (lower is better)
Translates to: GWEAAQGQMSTG*QRLGHRSLCST
Trigger: TGTTGAGCAAAGACTCCTGTGACCCAAACGCTGGCAGCCAGTTGACATTTGACCCTGAGCAGCCTCCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
ENST00000474317.1
CDS GCA 72 bp GGGACAATCACTCCTAGGACTCTGCCTCTCAGCCCCTaGTGCTGTGCTGTGAAAATCCCAGGCCATACAAGC +
Preference number: 6 (lower is better)
Translates to: GTITPRTLPLSP*CCAVKIPGHTS
Trigger: GCTTGTATGGCCTGGGATTTTCACAGCACAGCAGCAGGGGCTGAGAGGCAGAGTCCTAGGAGTGATTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS GCA 72 bp CCTTACCTCCTCCTTCTCCTTTTCTTCTGGGCCGGCTaGCACACCAATGTTCACCAGAAGGTCCTTGCTGCC +
Preference number: 6 (lower is better)
Translates to: PYLLLLLFFWAG*HTNVHQKVLAA
Trigger: GGCAGCAAGGACCTTCTGGTGAACATTGGTGTGGCAGCCGGCCCAGAAGAAAAGGAGAAGGAGGAGGTAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466831.2
CDS GCA 72 bp GAGCAATCACCCATCCGGCTTCCTGGCATCTTAATGTaGGCCAGGCACTGCGCTCAGCGCTGGAATAAATCC +
Preference number: 6 (lower is better)
Translates to: EQSPIRLPGILM*ARHCAQRWNKS
Trigger: GGATTTATTCCAGCGCTGAGCGCAGTGCCTGGCGCACATTAAGATGCCAGGAAGCCGGATGGGTGATTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488060.1
CDS CCA 72 bp AGCCGGTCCCCAAGCATCACAGAGGACTGCACAGGCTaGCAGCTACGGGAACTGCAGAAATCGCTTATTCAC +
Preference number: 6 (lower is better)
Translates to: SRSPSITEDCTG*QLRELQKSLIH
Trigger: GTGAATAAGCGATTTCTGCAGTTCCCGTAGCTGCCAGCCTGTGCAGTCCTCTGTGATGCTTGGGGACCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343003.10
ENST00000399949.6
ENST00000409126.5
CDS CAA 72 bp TGCAGCAGGCGGCAGGCTTCAAAGAAATGTCTGTACTaGCCCTGCTTCATGAGGTTGGCGAGCTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: CSRRQASKKCLY*PCFMRLASSRQ
Trigger: CTGCCTGGAGCTCGCCAACCTCATGAAGCAGGGCAAGTACAGACATTTCTTTGAAGCCTGCCGCCTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS CAA 72 bp AGCTTGAAGGCATTTTTCACGCTGAGGTTGCAGTCCTaGTCGCGCCCATCCCCCAGGTCCACAAGCTCCATC +
Preference number: 6 (lower is better)
Translates to: SLKAFFTLRLQS*SRPSPRSTSSI
Trigger: GATGGAGCTTGTGGACCTGGGGGATGGGCGCGACAAGGACTGCAACCTCAGCGTGAAAAATGCCTTCAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS CAA 72 bp CTACTGACGAGCTTGAAGGCATTTTTCACGCTGAGGTaGCAGTCCTTGTCGCGCCCATCCCCCAGGTCCACA +
Preference number: 6 (lower is better)
Translates to: LLTSLKAFFTLR*QSLSRPSPRST
Trigger: TGTGGACCTGGGGGATGGGCGCGACAAGGACTGCAACCTCAGCGTGAAAAATGCCTTCAAGCTCGTCAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS CAA 90 bp CTCTGTGGTACCCGTGCGTCATGGGCCGTCCTGAGGTCTGCAAGATaGGAGGTGGACTTCCGCTTAAAGGAGCTCTTCTTCAGAAAGGCA +
Preference number: 6 (lower is better)
Translates to: LCGTRASWAVLRSAR*EVDFRLKELFFRKA
Trigger: TGCCTTTCTGAAGAAGAGCTCCTTTAAGCGGAAGTCCACCTCCAATCTTGCAGACCTCAGGACGGCCCATGACGCACGGGTACCACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 90 bp GGACTCTCCCTCCTCCAGGCAGCCTCAGTCACATTGCTCACAAGTTaGAAGACTCTGTCAAAGTCCTTGGCCCTTATCGGGCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GLSLLQAASVTLLTS*KTLSKSLALIGLLQ
Trigger: CTGGAGGAGCCCGATAAGGGCCAAGGACTTTGACAGAGTCTTCAAACTTGTGAGCAATGTGACTGAGGCTGCCTGGAGGAGGGAGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 90 bp GAGCTGCAAGTGCAGGAACTGTCGCTTTCCACCGCCCAGGAACTTTaGGTTTCAAGAGGAAATACGGCAGTGTCAGCGTCTAGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: ELQVQELSLSTAQEL*VSRGNTAVSASRWG
Trigger: GCCCCACCTAGACGCTGACACTGCCGTATTTCCTCTTGAAACCAAAAGTTCCTGGGCGGTGGAAAGCGACAGTTCCTGCACTTGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 90 bp TTGGGTCACAGGAGTCTTTGCTCAACACATCCTGGACAATCGGGCTaGGCAAAGAGCTGCAAGTGCAGGAACTGTCGCTTTCCACCGCCC +
Preference number: 6 (lower is better)
Translates to: LGHRSLCSTHPGQSG*AKSCKCRNCRFPPP
Trigger: GGGCGGTGGAAAGCGACAGTTCCTGCACTTGCAGCTCTTTGCCAAGCCCGATTGTCCAGGATGTGTTGAGCAAAGACTCCTGTGACCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS TCA 72 bp GCTACGGGAACTGCAGAAATCGCTTATTCACTGCTTTaGCGTTGTATGCGTTCCCGGCCAGAGCCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: ATGTAEIAYSLL*RCMRSRPEPAQ
Trigger: CTGGGCAGGCTCTGGCCGGGAACGCATACAACGTCAAAGCAGTGAATAAGCGATTTCTGCAGTTCCCGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000399949.6
CDS TCA 72 bp CAGTTTCTGACGGCTGCCCAACTGGCTGGACAGACCTaGGCAATCACCCATCCGGCTTCCTGGCATCTTAAT +
Preference number: 6 (lower is better)
Translates to: QFLTAAQLAGQT*AITHPASWHLN
Trigger: ATTAAGATGCCAGGAAGCCGGATGGGTGATTGCTCAGGTCTGTCCAGCCAGTTGGGCAGCCGTCAGAAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488060.1
CDS GCA 72 bp ACAATCACTCCTAGGACTCTGCCTCTCAGCCCCTGCTaGTGTGCTGTGAAAATCCCAGGCCATACAAGCAGC +
Preference number: 6 (lower is better)
Translates to: TITPRTLPLSPC*CAVKIPGHTSS
Trigger: GCTGCTTGTATGGCCTGGGATTTTCACAGCACAGCAGCAGGGGCTGAGAGGCAGAGTCCTAGGAGTGATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS CCA 72 bp CTTTTCTGTCACATGACGGAGGGACACGCAGCCAGGTaGAGGCAACTGCTCCATCAGCACACTACGCAATCT +
Preference number: 6 (lower is better)
Translates to: LFCHMTEGHAAR*RQLLHQHTTQS
Trigger: AGATTGCGTAGTGTGCTGATGGAGCAGTTGCCTCCACCTGGCTGCGTGTCCCTCCGTCATGTGACAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS CAA 72 bp TTGGAGGCTTCCAGAACCTGGATGACATCCCCGGCTTaGAAGCCCAGTTCCTGGTCATCCATGGTCACATGG +
Preference number: 6 (lower is better)
Translates to: LEASRTWMTSPA*KPSSWSSMVTW
Trigger: CCATGTGACCATGGATGACCAGGAACTGGGCTTCAAAGCCGGGGATGTCATCCAGGTTCTGGAAGCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
ENST00000454083.1
CDS CAA 72 bp GCCTCCTGTTTTCATTTCCGGAAGGGGGTGAGCCTGTaGAAGGTGTGCCAGAAGAGCGAGGACTTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: ASCFHFRKGVSL*KVCQKSEDFLL
Trigger: CAAGAGGAAGTCCTCGCTCTTCTGGCACACCTTCAACAGGCTCACCCCCTTCCGGAAATGAAAACAGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS CAA 72 bp GGCCATGCTCCGAAGCCTCTCCCTTTGAACAGGCATTaGACCCCTCTCGGCTCTGAATTCCTTTCAGGACTG +
Preference number: 6 (lower is better)
Translates to: GHAPKPLPLNRH*TPLGSEFLSGL
Trigger: CAGTCCTGAAAGGAATTCAGAGCCGAGAGGGGTCAAATGCCTGTTCAAAGGGAGAGGCTTCGGAGCATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 90 bp AAGACTCTGTCAAAGTCCTTGGCCCTTATCGGGCTCCTCCAGCGTTaGGTCCTTCCTGACCCAAGCTTTTGGGAGTCAGTGGAGGAACTG +
Preference number: 6 (lower is better)
Translates to: KTLSKSLALIGLLQR*VLPDPSFWESVEEL
Trigger: CAGTTCCTCCACTGACTCCCAAAAGCTTGGGTCAGGAAGGACCAAACGCTGGAGGAGCCCGATAAGGGCCAAGGACTTTGACAGAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS TCA 72 bp CTCTTGAAGACAAGCTCTTCACGGCCAGGATGTTTGTaGGGCCTACGCTTTGCCATCTGCACGGTGTTGCCA +
Preference number: 6 (lower is better)
Translates to: LLKTSSSRPGCL*GLRFAICTVLP
Trigger: TGGCAACACCGTGCAGATGGCAAAGCGTAGGCCTCACAAACATCCTGGCCGTGAAGAGCTTGTCTTCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424834.6
ENST00000439928.2
CDS GCA 72 bp TCAACTGGCTGCCAGCGTTTGGGTCACAGGAGTCTTTaGTCAACACATCCTGGACAATCGGGCTTGGCAAAG +
Preference number: 6 (lower is better)
Translates to: STGCQRLGHRSL*STHPGQSGLAK
Trigger: CTTTGCCAAGCCCGATTGTCCAGGATGTGTTGAGCAAAGACTCCTGTGACCCAAACGCTGGCAGCCAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 72 bp AGCTACGGGAACTGCAGAAATCGCTTATTCACTGCTTaGACGTTGTATGCGTTCCCGGCCAGAGCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: SYGNCRNRLFTA*TLYAFPARACP
Trigger: TGGGCAGGCTCTGGCCGGGAACGCATACAACGTCAAAGCAGTGAATAAGCGATTTCTGCAGTTCCCGTAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000399949.6
CDS CAA 72 bp GTCAACTGGCTGCCAGCGTTTGGGTCACAGGAGTCTTaGCTCAACACATCCTGGACAATCGGGCTTGGCAAA +
Preference number: 6 (lower is better)
Translates to: VNWLPAFGSQES*LNTSWTIGLGK
Trigger: TTTGCCAAGCCCGATTGTCCAGGATGTGTTGAGCAAAGACTCCTGTGACCCAAACGCTGGCAGCCAGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 90 bp ACTTTCCCAGGCCATGCTCCGAAGCCTCTCCCTTTGAACAGGCATTaGACCCCTCTCGGCTCTGAATTCCTTTCAGGACTGAGGACTTCA +
Preference number: 6 (lower is better)
Translates to: TFPGHAPKPLPLNRH*TPLGSEFLSGLRTS
Trigger: TGAAGTCCTCAGTCCTGAAAGGAATTCAGAGCCGAGAGGGGTCAAATGCCTGTTCAAAGGGAGAGGCTTCGGAGCATGGCCTGGGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 90 bp CATTTGGGATGGACTTTCCCAGGCCATGCTCCGAAGCCTCTCCCTTaGAACAGGCATTTGACCCCTCTCGGCTCTGAATTCCTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: HLGWTFPGHAPKPLP*NRHLTPLGSEFLSG
Trigger: TCCTGAAAGGAATTCAGAGCCGAGAGGGGTCAAATGCCTGTTCAAAGGGAGAGGCTTCGGAGCATGGCCTGGGAAAGTCCATCCCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS TCA 72 bp AGGTCAGTCCGAGCGAGTTTCTGCACCAGCTACTCTTaGAGACAAGCTCTTCACGGCCAGGATGTTTGTGAG +
Preference number: 6 (lower is better)
Translates to: RSVRASFCTSYS*RQALHGQDVCE
Trigger: CTCACAAACATCCTGGCCGTGAAGAGCTTGTCTTCAAGAGTAGCTGGTGCAGAAACTCGCTCGGACTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS TCA 72 bp TGGTGTGCTTTGAGCCTCAAGTGGAATGATGATACATaGAAGCACCCGTTGGATGCTCTCATCTGCCGCCGG +
Preference number: 6 (lower is better)
Translates to: WCALSLKWNDDT*KHPLDALICRR
Trigger: CCGGCGGCAGATGAGAGCATCCAACGGGTGCTTTCATGTATCATCATTCCACTTGAGGCTCAAAGCACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494772.5
CDS CAA 72 bp GGGAACTGCAGAAATCGCTTATTCACTGCTTTGACGTaGTATGCGTTCCCGGCCAGAGCCTGCCCAGAAACT +
Preference number: 6 (lower is better)
Translates to: GNCRNRLFTALT*YAFPARACPET
Trigger: AGTTTCTGGGCAGGCTCTGGCCGGGAACGCATACAACGTCAAAGCAGTGAATAAGCGATTTCTGCAGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343003.10
CDS CAA 72 bp CTCCTCCAGGCAGCCTCAGTCACATTGCTCACAAGTTaGAAGACTCTGTCAAAGTCCTTGGCCCTTATCGGG +
Preference number: 6 (lower is better)
Translates to: LLQAASVTLLTS*KTLSKSLALIG
Trigger: CCCGATAAGGGCCAAGGACTTTGACAGAGTCTTCAAACTTGTGAGCAATGTGACTGAGGCTGCCTGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 72 bp GTGCAGGAACTGTCGCTTTCCACCGCCCAGGAACTTTaGGTTTCAAGAGGAAATACGGCAGTGTCAGCGTCT +
Preference number: 6 (lower is better)
Translates to: VQELSLSTAQEL*VSRGNTAVSAS
Trigger: AGACGCTGACACTGCCGTATTTCCTCTTGAAACCAAAAGTTCCTGGGCGGTGGAAAGCGACAGTTCCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 72 bp GCACCCCAAGTGAAGGCTTTCCAGACTCCAGAATCTTaGTATCTCCCCTCTAGCTACCATCCTTCTGTTTGG +
Preference number: 6 (lower is better)
Translates to: APQVKAFQTPES*YLPSSYHPSVW
Trigger: CCAAACAGAAGGATGGTAGCTAGAGGGGAGATAGCAAGATTCTGGAGTCTGGAAAGCCTTCACTTGGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000454083.1
CDS CCA 72 bp TGCAGGAACTGTCGCTTTCCACCGCCCAGGAACTTTTaGTTTCAAGAGGAAATACGGCAGTGTCAGCGTCTA +
Preference number: 6 (lower is better)
Translates to: CRNCRFPPPRNF*FQEEIRQCQRL
Trigger: TAGACGCTGACACTGCCGTATTTCCTCTTGAAACCAAAAGTTCCTGGGCGGTGGAAAGCGACAGTTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 72 bp AGGAGTCTTTGCTCAACACATCCTGGACAATCGGGCTaGGCAAAGAGCTGCAAGTGCAGGAACTGTCGCTTT +
Preference number: 6 (lower is better)
Translates to: RSLCSTHPGQSG*AKSCKCRNCRF
Trigger: AAAGCGACAGTTCCTGCACTTGCAGCTCTTTGCCAAGCCCGATTGTCCAGGATGTGTTGAGCAAAGACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS TCA 72 bp TGTGGTCCAAGTGACATCACAAGACTAGGGCCCAAGTaGCCTTGGTCCACGCATAGAACTCTGGGGAATAAT +
Preference number: 6 (lower is better)
Translates to: CGPSDITRLGPK*PWSTHRTLGNN
Trigger: ATTATTCCCCAGAGTTCTATGCGTGGACCAAGGTCACTTGGGCCCTAGTCTTGTGATGTCACTTGGACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS GCA 72 bp TCACAGAGGACTGCACAGGCTGGCAGCTACGGGAACTaGAGAAATCGCTTATTCACTGCTTTGACGTTGTAT +
Preference number: 6 (lower is better)
Translates to: SQRTAQAGSYGN*RNRLFTALTLY
Trigger: ATACAACGTCAAAGCAGTGAATAAGCGATTTCTGCAGTTCCCGTAGCTGCCAGCCTGTGCAGTCCTCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343003.10
ENST00000399949.6
CDS GCA 72 bp AGCTCTTCTTCAGAAAGGCAAGATTGTCCGTGCTCTTaGTCCTCCTGTAGCCCATGCTGTTGTTTTCAGGGT +
Preference number: 6 (lower is better)
Translates to: SSSSERQDCPCS*SSCSPCCCFQG
Trigger: ACCCTGAAAACAACAGCATGGGCTACAGGAGGAGCAAGAGCACGGACAATCTTGCCTTTCTGAAGAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS CAA 72 bp ACATTGCTCACAAGTTTGAAGACTCTGTCAAAGTCCTaGGCCCTTATCGGGCTCCTCCAGCGTTTGGTCCTT +
Preference number: 6 (lower is better)
Translates to: TLLTSLKTLSKS*ALIGLLQRLVL
Trigger: AAGGACCAAACGCTGGAGGAGCCCGATAAGGGCCAAGGACTTTGACAGAGTCTTCAAACTTGTGAGCAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS TCA 72 bp TGGTGTGCTTTGAGCCTCAAGTGGAATGATGATACATaGAAGCACCCTTTGACTTGTCCCACAGTGCCTGTC +
Preference number: 6 (lower is better)
Translates to: WCALSLKWNDDT*KHPLTCPTVPV
Trigger: GACAGGCACTGTGGGACAAGTCAAAGGGTGCTTTCATGTATCATCATTCCACTTGAGGCTCAAAGCACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488060.1
CDS TCA 72 bp TCTCCCTTTGAACAGGCATTTGACCCCTCTCGGCTCTaGATTCCTTTCAGGACTGAGGACTTCAGTTTCTTA +
Preference number: 6 (lower is better)
Translates to: SPFEQAFDPSRL*IPFRTEDFSFL
Trigger: TAAGAAACTGAAGTCCTCAGTCCTGAAAGGAATTCAGAGCCGAGAGGGGTCAAATGCCTGTTCAAAGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382108.8
ENST00000424834.6
ENST00000466831.2
CDS GCA 72 bp GATCAGACAGGCCACATTCTTCATGGCCTCATATGCTaGCTTTATGTTGCTGTAATCACCGTGTTCCTGTGT +
Preference number: 6 (lower is better)
Translates to: DQTGHILHGLIC*LYVAVITVFLC
Trigger: ACACAGGAACACGGTGATTACAGCAACATAAAGGCAGCATATGAGGCCATGAAGAATGTGGCCTGTCTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343003.10
ENST00000382095.8
ENST00000382108.8
ENST00000399949.6
ENST00000409126.5
ENST00000424834.6
ENST00000434675.5
CDS GCA 72 bp AGAAACCAAGTGAAGGCTTTCCAGACTCCAGAATCTTaGTATCTCCCCTCTAGCTACCATCCTTCTGTTTGG +
Preference number: 6 (lower is better)
Translates to: RNQVKAFQTPES*YLPSSYHPSVW
Trigger: CCAAACAGAAGGATGGTAGCTAGAGGGGAGATAGCAAGATTCTGGAGTCTGGAAAGCCTTCACTTGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399949.6
ENST00000409126.5
CDS TCA 72 bp TGGAGGAAGCCACCCTTATGGCTCTTAATCAAATGTTaGAAGTGTGCCCACAACAATGACTGGAACAAAGTG +
Preference number: 6 (lower is better)
Translates to: WRKPPLWLLIKC*KCAHNNDWNKV
Trigger: CACTTTGTTCCAGTCATTGTTGTGGGCACACTTTCAACATTTGATTAAGAGCCATAAGGGTGGCTTCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS CCA 72 bp GTTGAAAGTGTGCCCACAACAATGACTGGAACAAAGTaGAATCTTCAGAATTGCGATGCAGATAAAGGGTCT +
Preference number: 6 (lower is better)
Translates to: VESVPTTMTGTK*NLQNCDADKGS
Trigger: AGACCCTTTATCTGCATCGCAATTCTGAAGATTCCACTTTGTTCCAGTCATTGTTGTGGGCACACTTTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS TCA 72 bp GCTCTTAATCAAATGTTGAAAGTGTGCCCACAACAATaGCTGGAACAAAGTGGAATCTTCAGAATTGCGATG +
Preference number: 6 (lower is better)
Translates to: ALNQMLKVCPQQ*LEQSGIFRIAM
Trigger: CATCGCAATTCTGAAGATTCCACTTTGTTCCAGTCATTGTTGTGGGCACACTTTCAACATTTGATTAAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS TCA 72 bp CTGTTAGGTACATTGATCAACAAGTGCTACAGACCCTaGAGTAAGCATTTTGCATTAAGTGATTGGACCCAA +
Preference number: 6 (lower is better)
Translates to: LLGTLINKCYRP*SKHFALSDWTQ
Trigger: TTGGGTCCAATCACTTAATGCAAAATGCTTACTTCAGGGTCTGTAGCACTTGTTGATCAATGTACCTAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439928.2
CDS CAA 72 bp CTGTTGAATGTGGATGATAAAACCCATCTCTCAGGGTaGTTTATACATTCTGAACAAGTACTTGTTATTGGT +
Preference number: 6 (lower is better)
Translates to: LLNVDDKTHLSG*FIHSEQVLVIG
Trigger: ACCAATAACAAGTACTTGTTCAGAATGTATAAACAACCCTGAGAGATGGGTTTTATCATCCACATTCAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343003.10
ENST00000454083.1
ENST00000488060.1
ENST00000494772.5