RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPAST (Homo sapiens)

Ensembl gene IDs: ENSG00000021574

Ensembl transcript IDs: ENST00000315285.9, ENST00000621856.2, ENST00000642281.1, ENST00000642455.1, ENST00000642751.1, ENST00000642999.1, ENST00000643327.1, ENST00000643334.1, ENST00000644408.1, ENST00000644954.1, ENST00000645159.1, ENST00000645400.1, ENST00000645550.1, ENST00000645671.1, ENST00000646082.1, ENST00000646571.1, ENST00000647007.1, ENST00000647133.1

Found 640 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTAAGCGGTCCTTGGCCATAACCAAATTAGTCATCATTTTAGCTTaGAGGCGTCTAGCTCTTTCACACTGTTCACCTTGTCCTGTAACT +
Preference number: 1 (lower is better)
Translates to: CKRSLAITKLVIILA*RRLALSHCSPCPVT
Trigger: AGTTACAGGACAAGGTGAACAGTGTGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACTAATTTGGTTATGGCCAAGGACCGCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645400.1
3UTR GCA 90 bp CATTATGATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTaGTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCA +
Preference number: 1 (lower is better)
Translates to: HYDYIGKEDQNQVLL*SNLVSIGITVTIKA
Trigger: TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATCATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR CCA 90 bp CCTGAGTATCCATCAGTCATTCTAGCAAGTTGTGCTAGTTCTTTTTaGGTCAATGGACTTCCTTGTTTACATAACAGATTTTTAAGCAAA +
Preference number: 1 (lower is better)
Translates to: PEYPSVILASCASSF*VNGLPCLHNRFLSK
Trigger: TTTGCTTAAAAATCTGTTATGTAAACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACAACTTGCTAGAATGACTGATGGATACTCAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
3UTR CCA 90 bp TCTCAACTCTCATTTTTATTATTCAGGGAGTTCCAAAGTCATGATTaGAAGAGACATGATTTACCTTATGGCTACAAACAGCATATGATC +
Preference number: 1 (lower is better)
Translates to: SQLSFLLFREFQSHD*KRHDLPYGYKQHMI
Trigger: GATCATATGCTGTTTGTAGCCATAAGGTAAATCATGTCTCTTCCAATCATGACTTTGGAACTCCCTGAATAATAAAAATGAGAGTTGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
3UTR-3UTR TCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTACGCTTCTAAAGTTTaGGGGCTGACGCTGCGTTTT +
Preference number: 2 (lower is better)
Translates to: LCSNLVSIGITVTIKARPYASKV*GLTLRF
Trigger: AAAACGCAGCGTCAGCCCTCAAACTTTAGAAGCGTA...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
3UTR-3UTR TCA 90 bp TTCTCATCTCACTGGCAGACATATTCTTCACCTGTTCTGGTTTTAGTTCTCGGATTCGGAGTACCCTTATaGGTGGTAGGAGCAGGACCA +
Preference number: 2 (lower is better)
Translates to: FSSHWQTYSSPVLVLVLGFGVPL*VVGAGP
Trigger: TGGTCCTGCTCCTACCACTCATAAGGGTACTCCGAA...TCCGAGAACTAAAACCAGAACAGGTGAAGAATATGTCTGCCAGTGAGATGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643334.1
3UTR-3UTR GCA 90 bp GTGACTTGGAAAATGGCAAAACTGGTTGCATCTTCTCTAGAAGTTGTAAGCGGTTTGCTCCTTCTGTCCTaGCAGGCTAGTCTCGAACTC +
Preference number: 2 (lower is better)
Translates to: VTWKMAKLVASSLEVVSGLLLLS*QASLEL
Trigger: GAGTTCGAGACTAGCCTGGCAGGACAGAAGGAGCAA...ACCGCTTACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATTTTCCAAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645400.1
3UTR-3UTR TCA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGTACGCTTCTAAAGTTTaGGGGCTGACGCTGCGTTTT +
Preference number: 2 (lower is better)
Translates to: YGYKQHMILRNHASSGWAYASKV*GLTLRF
Trigger: AAAACGCAGCGTCAGCCCTCAAACTTTAGAAGCGTA...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642751.1
3UTR-3UTR GCA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGGATCCTAAGAAATCATaGATCTTCTGGCTGGGCGCA +
Preference number: 2 (lower is better)
Translates to: YGYKQHMILRNHASSGWADPKKS*IFWLGA
Trigger: TGCGCCCAGCCAGAAGATGCATGATTTCTTAGGATC...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
3UTR-3UTR GCA 90 bp TCCGTTTGTGACTTGGAAAATGGCAAAACTGGTTGCATCTTCTCTAGAAGTTGTTACCATTCCACAGCTTaGTCCTTCTGTCCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: SVCDLENGKTGCIFSRSCYHSTA*SFCPAR
Trigger: CCTGGCAGGACAGAAGGAGCAAGCTGTGGAATGGTA...ACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATTTTCCAAGTCACAAACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645400.1
3UTR-3UTR CCA 90 bp TCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAACAGCCTCAGCTCCACTTTCTGACTaGAGATGTCCATTGCGGCAT +
Preference number: 2 (lower is better)
Translates to: SFGKDTYTRLMKRLRTASAPLSD*RCPLRH
Trigger: ATGCCGCAATGGACATCTCCAGTCAGAAAGTGGAGC...TGAGGCTGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643334.1
3UTR-3UTR GCA 90 bp TCAGTTTTTAGGCGTCTACTAGCATCGTGCTCCCCTTCTCTTCTTTCACACAAACGATTCTGCAGCTACTaGTTTAGCCAGCATTGTCTT +
Preference number: 2 (lower is better)
Translates to: SVFRRLLASCSPSLLSHKRFCSY*FSQHCL
Trigger: AAGACAATGCTGGCTAAAGCAGTAGCTGCAGAATCG...TTTGTGTGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACGCCTAAAAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
3UTR-3UTR GCA 90 bp CCGTTTGTGACTTGGAAAATGGCAAAACTGGTTGCATCTTCTCTAGAAGTTGTAACACGTGTGAGCCACTaGACCTGGACTGCATTATTT +
Preference number: 2 (lower is better)
Translates to: PFVTWKMAKLVASSLEVVTRVSH*TWTALF
Trigger: AAATAATGCAGTCCAGGTGCAGTGGCTCACACGTGT...TACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATTTTCCAAGTCACAAACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645400.1
3UTR-3UTR TCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGTGTTTCTGTAGCCGATaGCGTTCATTGAAGATCTTG +
Preference number: 2 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGCFCSR*RSLKIL
Trigger: CAAGATCTTCAATGAACGTCATCGGCTACAGAAACA...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR TCA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGATACTGCAGGTCACATaGAGACTGATCTACATGTTA +
Preference number: 2 (lower is better)
Translates to: YGYKQHMILRNHASSGWAILQVT*RLIYML
Trigger: TAACATGTAGATCAGTCTTCATGTGACCTGCAGTAT...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
3UTR-3UTR TCA 90 bp AAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTTACGCTTCTAAAGTTTaGGGGCTGACGCTGCGTTTT +
Preference number: 2 (lower is better)
Translates to: KQWYLQSPCSNVCTLLKFYASKV*GLTLRF
Trigger: AAAACGCAGCGTCAGCCCTCAAACTTTAGAAGCGTA...AAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
3UTR-3UTR TCA 90 bp TGCACCCATTACAAGTACTCTGTCATCTCCAGCAGACTGTACACCATCAAATTCAAAATTATAGAAGGTTaGAGTTCTCGAGCCACAGCA +
Preference number: 2 (lower is better)
Translates to: CTHYKYSVISSRLYTIKFKIIEG*SSRATA
Trigger: TGCTGTGGCTCGAGAACTTCAACCTTCTATAATTTT...GAATTTGATGGTGTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
3UTR-3UTR TCA 90 bp CTTAAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTGTTTCTGTAGCCGATaGCGTTCATTGAAGATCTTG +
Preference number: 2 (lower is better)
Translates to: LKQWYLQSPCSNVCTLLKCFCSR*RSLKIL
Trigger: CAAGATCTTCAATGAACGTCATCGGCTACAGAAACA...CTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
3UTR-3UTR TCA 90 bp TCAGTTTTTAGGCGTCTACTAGCATCGTGCTCCCCTTCTCTTCTTTCACACAAATGTTTTGCCAAGTCTTaGCCAGCTATATCATCAAAT +
Preference number: 2 (lower is better)
Translates to: SVFRRLLASCSPSLLSHKCFAKS*PAISSN
Trigger: ATTTGATGATATAGCTGGTCAAGACTTGGCAAAACA...TTTGTGTGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACGCCTAAAAACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
3UTR-3UTR CCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGACCATTCACTGTTCCTaGAATACTTTCATCTGCAAC +
Preference number: 2 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGTIHCS*NTFICN
Trigger: GTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGT...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR TCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGATGTTTCTGTAGCCGATaGCGTTCATTGAAGATCTTG +
Preference number: 2 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGCFCSR*RSLKIL
Trigger: CAAGATCTTCAATGAACGTCATCGGCTACAGAAACA...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR TCA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGATACTGCAGGTCACATaGAGACTGATCTACATGTTA +
Preference number: 2 (lower is better)
Translates to: MFETLKGYYPSPNICIALILQVT*RLIYML
Trigger: TAACATGTAGATCAGTCTTCATGTGACCTGCAGTAT...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
3UTR-3UTR GCA 90 bp AATTCAGTTTTTAGGCGTCTACTAGCATCGTGCTCCCCTTCTCTTCTTTCACACTATATTAAAGAAGGTTaGATTCGATTCTGCAGCTAC +
Preference number: 2 (lower is better)
Translates to: NSVFRRLLASCSPSLLSHYIKEG*IRFCSY
Trigger: GTAGCTGCAGAATCGAATGCAACCTTCTTTAATATA...GTGTGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACGCCTAAAAACTGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
3UTR-3UTR CCA 90 bp TTCTCATCTCACTGGCAGACATATTCTTCACCTGTTCTGGTTTTAGTTCTCGGATATTTCTCATCTCACTaGCAGACATATTCTTCACCT +
Preference number: 2 (lower is better)
Translates to: FSSHWQTYSSPVLVLVLGYFSSH*QTYSSP
Trigger: AGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATA...TCCGAGAACTAAAACCAGAACAGGTGAAGAATATGTCTGCCAGTGAGATGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
3UTR-3UTR TCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGTGTTTCTGTAGCCGATaGCGTTCATTGAAGATCTTG +
Preference number: 2 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLCFCSR*RSLKIL
Trigger: CAAGATCTTCAATGAACGTCATCGGCTACAGAAACA...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR GCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAATCAGGTTTTGTTGTaGTCTAACTTAGTGTCCATT +
Preference number: 2 (lower is better)
Translates to: VLLCSNLVSIGITVTIKANQVLL*SNLVSI
Trigger: AATGGACACTAAGTTAGAGCACAACAAAACCTGATT...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR GCA 90 bp TCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAACAGCCTCATATATTAAAGAAGGTTaGATTCGATTCTGCAGCTAC +
Preference number: 2 (lower is better)
Translates to: SFGKDTYTRLMKRLRTASYIKEG*IRFCSY
Trigger: GTAGCTGCAGAATCGAATGCAACCTTCTTTAATATA...TGAGGCTGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
3UTR-3UTR TCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTGTTTCTGTAGCCGATaGCGTTCATTGAAGATCTTG +
Preference number: 2 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVCFCSR*RSLKIL
Trigger: CAAGATCTTCAATGAACGTCATCGGCTACAGAAACA...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCACCATTCACTGTTCCTaGAATACTTTCATCTGCAAC +
Preference number: 2 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSTIHCS*NTFICN
Trigger: GTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGT...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CCA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACAACCATTCACTGTTCCTaGAATACTTTCATCTGCAAC +
Preference number: 2 (lower is better)
Translates to: CLLPFTVPGILSSATQYTTIHCS*NTFICN
Trigger: GTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGT...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR GCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAAATCAGGTTTTGTTGTaGTCTAACTTAGTGTCCATT +
Preference number: 2 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGNQVLL*SNLVSI
Trigger: AATGGACACTAAGTTAGAGCACAACAAAACCTGATT...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCACCATTCACTGTTCCTaGAATACTTTCATCTGCAAC +
Preference number: 2 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFTIHCS*NTFICN
Trigger: GTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGT...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR CAA 90 bp TTACATTATGATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAG +
Preference number: 2 (lower is better)
Translates to: LHYDYIGKEDQNQVL*CSNLVSIGITVTIK
Trigger: CTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATCATAATGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR GCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCAATCAGGTTTTGTTGTaGTCTAACTTAGTGTCCATT +
Preference number: 2 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSNQVLL*SNLVSI
Trigger: AATGGACACTAAGTTAGAGCACAACAAAACCTGATT...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR GCA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACAAATCAGGTTTTGTTGTaGTCTAACTTAGTGTCCATT +
Preference number: 2 (lower is better)
Translates to: CLLPFTVPGILSSATQYTNQVLL*SNLVSI
Trigger: AATGGACACTAAGTTAGAGCACAACAAAACCTGATT...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR GCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGAATCAGGTTTTGTTGTaGTCTAACTTAGTGTCCATT +
Preference number: 2 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLNQVLL*SNLVSI
Trigger: AATGGACACTAAGTTAGAGCACAACAAAACCTGATT...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CAA 90 bp GGTGGACCAAAGAGTAACAGCCCTCTGGCAGGAGCTCTAAGCCCTGTGAACAACGACTGGAGATGTCCATaGCGGCATGCCAAGTTAGTA +
Preference number: 3 (lower is better)
Translates to: GGPKSNSPLAGALSPVNNDWRCP*RHAKLV
Trigger: TACTAACTTGGCATGCCGCAATGGACATCTCCAGTC...GTTGTTCACAGGGCTTAGAGCTCCTGCCAGAGGGCTGTTACTCTTTGGTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643334.1
3UTR-3UTR CAA 90 bp GTGACTTGGAAAATGGCAAAACTGGTTGCATCTTCTCTAGAAGTTGTAAGCGGTATACCATTCCACAGCTaGCTCCTTCTGTCCTGCCAG +
Preference number: 3 (lower is better)
Translates to: VTWKMAKLVASSLEVVSGIPFHS*LLLSCQ
Trigger: CTGGCAGGACAGAAGGAGCAAGCTGTGGAATGGTAT...ACCGCTTACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATTTTCCAAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645400.1
3UTR GCA 72 bp AGTTCTTCAATACCTTTCTTATACCATTCCACAGCTTaGTCCTTCTGTCCTGCCAGGCTAGTCTCGAACTCC +
Preference number: 3 (lower is better)
Translates to: SSSIPFLYHSTA*SFCPARLVSNS
Trigger: GGAGTTCGAGACTAGCCTGGCAGGACAGAAGGAGCAAGCTGTGGAATGGTATAAGAAAGGTATTGAAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645400.1
3UTR-3UTR CAA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTGTATCTCCAAAGTCCTaGTTCCAACGTATGTACGCT +
Preference number: 3 (lower is better)
Translates to: LCSNLVSIGITVTIKARPVSPKS*FQRMYA
Trigger: AGCGTACATACGTTGGAACAAGGACTTTGGAGATAC...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
3UTR-3UTR CAA 90 bp GCACCCATTACAAGTACTCTGTCATCTCCAGCAGACTGTACACCATCAAATTCTGTATCTCCAAAGTCCTaGTTCCAACGTATGTACGCT +
Preference number: 3 (lower is better)
Translates to: APITSTLSSPADCTPSNSVSPKS*FQRMYA
Trigger: AGCGTACATACGTTGGAACAAGGACTTTGGAGATAC...AGAATTTGATGGTGTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646082.1
3UTR-3UTR CAA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGCAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCC +
Preference number: 3 (lower is better)
Translates to: YGYKQHMILRNHASSGWAQNQVL*CSNLVS
Trigger: GGACACTAAGTTAGAGCACAACAAAACCTGATTCTG...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
3UTR-3UTR CAA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGGACCAGAATCAGGTTTaGTTGTGCTCTAACTTAGTG +
Preference number: 3 (lower is better)
Translates to: YGYKQHMILRNHASSGWADQNQV*LCSNLV
Trigger: CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTC...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
3UTR-3UTR CAA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAGTATCTCCAAAGTCCTaGTTCCAACGTATGTACGCT +
Preference number: 3 (lower is better)
Translates to: VLLCSNLVSIGITVTIKAVSPKS*FQRMYA
Trigger: AGCGTACATACGTTGGAACAAGGACTTTGGAGATAC...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
3UTR-3UTR CAA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGGACCAGAATCAGGTTTaGTTGTGCTCTAACTTAGTG +
Preference number: 3 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGDQNQV*LCSNLV
Trigger: CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTC...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CAA 90 bp GCACCCATTACAAGTACTCTGTCATCTCCAGCAGACTGTACACCATCAAATTCTATAAGGTTAGCAAGGTaGCTGTCCACATTCCTAAAA +
Preference number: 3 (lower is better)
Translates to: APITSTLSSPADCTPSNSIRLAR*LSTFLK
Trigger: TTTTAGGAATGTGGACAGCAACCTTGCTAACCTTAT...AGAATTTGATGGTGTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
3UTR-3UTR CAA 90 bp AATTCAGTTTTTAGGCGTCTACTAGCATCGTGCTCCCCTTCTCTTCTTTCACACAAAAATTATAGAAGGTaGAAGTTCTCGAGCCACAGC +
Preference number: 3 (lower is better)
Translates to: NSVFRRLLASCSPSLLSHKNYRR*KFSSHS
Trigger: GCTGTGGCTCGAGAACTTCAACCTTCTATAATTTTT...GTGTGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACGCCTAAAAACTGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
3UTR TCA 72 bp TCCTTGGCCATAACCAAATTAGTCATCATTTTAGCTTaGAGGCGTCTAGCTCTTTCACACTGTTCACCTTGT +
Preference number: 3 (lower is better)
Translates to: SLAITKLVIILA*RRLALSHCSPC
Trigger: ACAAGGTGAACAGTGTGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACTAATTTGGTTATGGCCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645400.1
3UTR TCA 72 bp TGCCAAGTTAGTACTGTCATTATAGACGTCCGTTTGTaGCTTGGAAAATGGCAAAACTGGTTGCATCTTCTC +
Preference number: 3 (lower is better)
Translates to: CQVSTVIIDVRL*LGKWQNWLHLL
Trigger: GAGAAGATGCAACCAGTTTTGCCATTTTCCAAGTCACAAACGGACGTCTATAATGACAGTACTAACTTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645400.1
3UTR-3UTR CAA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTCAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCC +
Preference number: 3 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITQNQVL*CSNLVS
Trigger: GGACACTAAGTTAGAGCACAACAAAACCTGATTCTG...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CAA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGCAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCC +
Preference number: 3 (lower is better)
Translates to: MFETLKGYYPSPNICIALQNQVL*CSNLVS
Trigger: GGACACTAAGTTAGAGCACAACAAAACCTGATTCTG...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
3UTR-3UTR CAA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGACCAGAATCAGGTTTaGTTGTGCTCTAACTTAGTG +
Preference number: 3 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITDQNQV*LCSNLV
Trigger: CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTC...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CAA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAGTATCTCCAAAGTCCTaGTTCCAACGTATGTACGCT +
Preference number: 3 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGVSPKS*FQRMYA
Trigger: AGCGTACATACGTTGGAACAAGGACTTTGGAGATAC...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642751.1
ENST00000644408.1
3UTR-3UTR CAA 90 bp AATTCAGTTTTTAGGCGTCTACTAGCATCGTGCTCCCCTTCTCTTCTTTCACACTTGTTTTGCCAAGTCTaGACCAGCTATATCATCAAA +
Preference number: 3 (lower is better)
Translates to: NSVFRRLLASCSPSLLSHLFCQV*TSYIIK
Trigger: TTTGATGATATAGCTGGTCAAGACTTGGCAAAACAA...GTGTGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACGCCTAAAAACTGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
3UTR-3UTR CAA 90 bp GCACCCATTACAAGTACTCTGTCATCTCCAGCAGACTGTACACCATCAAATTCTTTGTTTTGCCAAGTCTaGACCAGCTATATCATCAAA +
Preference number: 3 (lower is better)
Translates to: APITSTLSSPADCTPSNSLFCQV*TSYIIK
Trigger: TTTGATGATATAGCTGGTCAAGACTTGGCAAAACAA...AGAATTTGATGGTGTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
3UTR-3UTR CAA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAAGGTTCATCTTCAAGTTaGGTGCACAAATATGTAAGA +
Preference number: 3 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKGSSSS*VHKYVR
Trigger: TCTTACATATTTGTGCACCAAACTTGAAGATGAACC...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CAA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAGGTTCATCTTCAAGTTaGGTGCACAAATATGTAAGA +
Preference number: 3 (lower is better)
Translates to: VLLCSNLVSIGITVTIKAGSSSS*VHKYVR
Trigger: TCTTACATATTTGTGCACCAAACTTGAAGATGAACC...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CAA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGACAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCC +
Preference number: 3 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGQNQVL*CSNLVS
Trigger: GGACACTAAGTTAGAGCACAACAAAACCTGATTCTG...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CAA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAGACCAGAATCAGGTTTaGTTGTGCTCTAACTTAGTG +
Preference number: 3 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGDQNQV*LCSNLV
Trigger: CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTC...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR TCA 72 bp AGGCTATCAACTTCATCTATAAAAATTATAGAAGGTTaGAGTTCTCGAGCCACAGCAAAAAGAGCCCTCACC +
Preference number: 3 (lower is better)
Translates to: RLSTSSIKIIEG*SSRATAKRALT
Trigger: GGTGAGGGCTCTTTTTGCTGTGGCTCGAGAACTTCAACCTTCTATAATTTTTATAGATGAAGTTGATAGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
3UTR-3UTR CAA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCCAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCC +
Preference number: 3 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSQNQVL*CSNLVS
Trigger: GGACACTAAGTTAGAGCACAACAAAACCTGATTCTG...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CAA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCCAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCC +
Preference number: 3 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSQNQVL*CSNLVS
Trigger: GGACACTAAGTTAGAGCACAACAAAACCTGATTCTG...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CAA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACAGACCAGAATCAGGTTTaGTTGTGCTCTAACTTAGTG +
Preference number: 3 (lower is better)
Translates to: CLLPFTVPGILSSATQYTDQNQV*LCSNLV
Trigger: CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTC...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR GCA 72 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTaGTCTAACTTAGTGTCCATTGGGATAACTGTGACC +
Preference number: 3 (lower is better)
Translates to: YIGKEDQNQVLL*SNLVSIGITVT
Trigger: GGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CAA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAGGTTCATCTTCAAGTTaGGTGCACAAATATGTAAGA +
Preference number: 3 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGGSSSS*VHKYVR
Trigger: TCTTACATATTTGTGCACCAAACTTGAAGATGAACC...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CAA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATGGTTCATCTTCAAGTTaGGTGCACAAATATGTAAGA +
Preference number: 3 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNGSSSS*VHKYVR
Trigger: TCTTACATATTTGTGCACCAAACTTGAAGATGAACC...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR-3UTR CAA 90 bp TTACTGTACATTTTGGGAGAACAAAAGGCAGATCAACAGACTAGAACTAGAACTAGTATTTCCCTTCTCTaGCACTGGAAACATTTTCAC +
Preference number: 3 (lower is better)
Translates to: LLYILGEQKADQQTRTRTSISLL*HWKHFH
Trigger: GTGAAAATGTTTCCAGTGCAAGAGAAGGGAAATACT...AGTTCTAGTTCTAGTCTGTTGATCTGCCTTTTGTTCTCCCAAAATGTACAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR TCA 72 bp ACTGCAGGTCACATGAAGACTGATCTACATGTTATATaGCAGAGTAACTCAAACCTTCAAACCTTCTCTATT +
Preference number: 3 (lower is better)
Translates to: TAGHMKTDLHVI*QSNSNLQTFSI
Trigger: AATAGAGAAGGTTTGAAGGTTTGAGTTACTCTGTCATATAACATGTAGATCAGTCTTCATGTGACCTGCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR CCA 72 bp CCATCAGTCATTCTAGCAAGTTGTGCTAGTTCTTTTTaGGTCAATGGACTTCCTTGTTTACATAACAGATTT +
Preference number: 3 (lower is better)
Translates to: PSVILASCASSF*VNGLPCLHNRF
Trigger: AAATCTGTTATGTAAACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACAACTTGCTAGAATGACTGATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
3UTR-3UTR CAA 90 bp TTACTGTACATTTTGGGAGAACAAAAGGCAGATCAACAGACTAGAACTAGAACTGGTTCATCTTCAAGTTaGGTGCACAAATATGTAAGA +
Preference number: 3 (lower is better)
Translates to: LLYILGEQKADQQTRTRTGSSSS*VHKYVR
Trigger: TCTTACATATTTGTGCACCAAACTTGAAGATGAACC...AGTTCTAGTTCTAGTCTGTTGATCTGCCTTTTGTTCTCCCAAAATGTACAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
3UTR CCA 72 bp TCATTTTTATTATTCAGGGAGTTCCAAAGTCATGATTaGAAGAGACATGATTTACCTTATGGCTACAAACAG +
Preference number: 3 (lower is better)
Translates to: SFLLFREFQSHD*KRHDLPYGYKQ
Trigger: CTGTTTGTAGCCATAAGGTAAATCATGTCTCTTCCAATCATGACTTTGGAACTCCCTGAATAATAAAAATGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGTCAGGAGCTCCGCACTaGCGCACGCTGCCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: YGYKQHMILRNHASSGWASGAPH*RTLPAG
Trigger: GCCGGCGGGCAGCGTGCGGCAGTGCGGAGCTCCTGA...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000646571.1
CDS-3UTR CCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTGAGGCACCGGGTTGCTaGCGCCGCCGGAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPEAPGC*RRRSLS
Trigger: AGAAAGGCTCCGGCGGCGCCAGCAACCCGGTGCCTC...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000646571.1
CDS-3UTR TCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTCCTCTTGGCTGCCATaGGGGCGCGGGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPSSWLP*GRGRSA
Trigger: AGCGCTTCTCCCGCGCCCTCATGGCAGCCAAGAGGA...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp CCCTCTGGCAGGAGCTCTAAGCCCTGTGAACAACTCAGGCCTCAGAGAAGGAAGTCGGATAGGACCCAGTaGTGCATCTTTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PSGRSSKPCEQLRPQRRKSDRTQ*CIFCQS
Trigger: GCTTTGGCAAAAGATGCAGCACTGGGTCCTATCCGA...CTTCCTTCTCTGAGGCCTGAGTTGTTCACAGGGCTTAGAGCTCCTGCCAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR GCA 90 bp AGCCCTCTGGCAGGAGCTCTAAGCCCTGTGAACAACTCAGGCCTCAGAGAAGGACGTCTACTAGCATCGTaGTCCCCTTCTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SPLAGALSPVNNSGLREGRLLAS*SPSLLS
Trigger: TGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACG...TCCTTCTCTGAGGCCTGAGTTGTTCACAGGGCTTAGAGCTCCTGCCAGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR GCA 90 bp AGCCCTCTGGCAGGAGCTCTAAGCCCTGTGAACAACTCAGGCCTCAGAGAAGGAGATAGGACCCAGTGCTaGATCTTTTGCCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SPLAGALSPVNNSGLREGDRTQC*IFCQSC
Trigger: ACAGCTTTGGCAAAAGATGCAGCACTGGGTCCTATC...TCCTTCTCTGAGGCCTGAGTTGTTCACAGGGCTTAGAGCTCCTGCCAGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CCA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTAAGGGGGCGGAGGCCTaGGAGGCACCGGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITKGAEA*EAPGCW
Trigger: CCAGCAACCCGGTGCCTCCCAGGCCTCCGCCCCCTT...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000646571.1
CDS-3UTR CCA 90 bp TTGAAGGCGTCTAGCTCTTTCACACTGTTCACCTTGTCCTGTAACTATAACAGCGCGCGGGAGAAGCGCTaGCAGAGCCACACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LKASSSFTLFTLSCNYNSAREKR*QSHTKR
Trigger: CCTCTTCGTGTGGCTCTGCCAGCGCTTCTCCCGCGC...GCTGTTATAGTTACAGGACAAGGTGAACAGTGTGAAAGAGCTAGACGCCTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR GCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAACCCCTTCTCCTCCTaGAGTCGGTGGCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKANPFSS*SRWLGP
Trigger: GGGCCCGAGCCACCGACTGCAGGAGGAGAAGGGGTT...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315285.9
CDS-3UTR GCA 90 bp GGTGGACCAAAGAGTAACAGCCCTCTGGCAGGAGCTCTAAGCCCTGTGAACAACGATAGGACCCAGTGCTaGATCTTTTGCCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GGPKSNSPLAGALSPVNNDRTQC*IFCQSC
Trigger: ACAGCTTTGGCAAAAGATGCAGCACTGGGTCCTATC...GTTGTTCACAGGGCTTAGAGCTCCTGCCAGAGGGCTGTTACTCTTTGGTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CCA 90 bp CTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAGCGCGGGAGAAGCGCTaGCAGAGCCACACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LVSSFGKDTYTRLMKRLRAREKR*QSHTKR
Trigger: CCTCTTCGTGTGGCTCTGCCAGCGCTTCTCCCGCGC...TCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646082.1
CDS-3UTR CCA 90 bp CCCTCTGGCAGGAGCTCTAAGCCCTGTGAACAACTCAGGCCTCAGAGAAGGAAGCTCATCAAGCTCTTGTaGCCTATTAGTTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: PSGRSSKPCEQLRPQRRKLIKLL*PISCTH
Trigger: ATGGGTGCAACTAATAGGCCACAAGAGCTTGATGAG...CTTCCTTCTCTGAGGCCTGAGTTGTTCACAGGGCTTAGAGCTCCTGCCAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CCA 90 bp AGCCCTCTGGCAGGAGCTCTAAGCCCTGTGAACAACTCAGGCCTCAGAGAAGGACTCATCAAGCTCTTGTaGCCTATTAGTTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: SPLAGALSPVNNSGLREGLIKLL*PISCTH
Trigger: ATGGGTGCAACTAATAGGCCACAAGAGCTTGATGAG...TCCTTCTCTGAGGCCTGAGTTGTTCACAGGGCTTAGAGCTCCTGCCAGAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR TCA 90 bp CTTAAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTCCTCTTGGCTGCCATaGGGGCGCGGGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: LKQWYLQSPCSNVCTLLKSSWLP*GRGRSA
Trigger: AGCGCTTCTCCCGCGCCCTCATGGCAGCCAAGAGGA...CTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR GCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCAGGAGCTCCGCACTaGCGCACGCTGCCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVSGAPH*RTLPAG
Trigger: GCCGGCGGGCAGCGTGCGGCAGTGCGGAGCTCCTGA...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000646571.1
CDS-3UTR GCA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCGACGGCGGCAGCCACTaGTACGGCGGGGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSDGGSH*YGGGHR
Trigger: TCTGTGGCCCCCGCCGTAGCAGTGGCTGCCGCCGTC...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000646571.1
CDS-3UTR GCA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACAGACGGCGGCAGCCACTaGTACGGCGGGGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: CLLPFTVPGILSSATQYTDGGSH*YGGGHR
Trigger: TCTGTGGCCCCCGCCGTAGCAGTGGCTGCCGCCGTC...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000646571.1
CDS-3UTR GCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCTGGGAGGCACCGGGTTaGTGGCGCCGCCGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSWEAPG*WRRRSL
Trigger: AAGGCTCCGGCGGCGCCAGCAACCCGGTGCCTCCCA...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACATGGGAGGCACCGGGTTaGTGGCGCCGCCGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: CLLPFTVPGILSSATQYTWEAPG*WRRRSL
Trigger: AAGGCTCCGGCGGCGCCAGCAACCCGGTGCCTCCCA...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000646571.1
CDS-3UTR CCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAGAGGCACCGGGTTGCTaGCGCCGCCGGAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGEAPGC*RRRSLS
Trigger: AGAAAGGCTCCGGCGGCGCCAGCAACCCGGTGCCTC...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000646571.1
CDS-3UTR CCA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGGCGCGGGAGAAGCGCTaGCAGAGCCACACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: MFETLKGYYPSPNICIALAREKR*QSHTKR
Trigger: CCTCTTCGTGTGGCTCTGCCAGCGCTTCTCCCGCGC...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGATCCTCTTGGCTGCCATaGGGGCGCGGGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGSSWLP*GRGRSA
Trigger: AGCGCTTCTCCCGCGCCCTCATGGCAGCCAAGAGGA...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp CCAAAGAGTAACAGCCCTCTGGCAGGAGCTCTAAGCCCTGTGAACAACTCAGGCGTCATCATTTTAGCTTaGAGGCGTCTAGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: PKSNSPLAGALSPVNNSGVIILA*RRLALS
Trigger: TGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGAC...GCCTGAGTTGTTCACAGGGCTTAGAGCTCCTGCCAGAGGGCTGTTACTCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR TCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTGCTCTATGGTGGCCTaGAAGGCCTGCAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPCSMVA*KACRSS
Trigger: ACTGGATCTGCAGGCCTTTCAGGCCACCATAGAGCA...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCCCACAGACCCCCGTGTaGCCGCCGGTCTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSPQTPV*PPVSGA
Trigger: AGCTCCTGAGACCGGCGGGCACACGGGGGTCTGTGG...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000646571.1
CDS-3UTR GCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTGGGAGGCACCGGGTTaGTGGCGCCGCCGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVWEAPG*WRRRSL
Trigger: AAGGCTCCGGCGGCGCCAGCAACCCGGTGCCTCCCA...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000646571.1
CDS-3UTR GCA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTTACAGGTTCCGCTTATaGGGCGACTCGGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITYRFRL*GDSGGG
Trigger: CCCTCCGCCCGAGTCGCCGCATAAGCGGAACCTGTA...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTGTGGTGAGTCGAGATTaGGCCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPVVSRD*AIALQP
Trigger: AGGCTGGAGTGCAATGGCGCAATCTCGACTCACCAC...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp CTGGAGATGTCCATTGCGGCATGCCAAGTTAGTACTGTCATTATAGACGTCCGTTACCATTCCACAGCTTaGTCCTTCTGTCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LEMSIAACQVSTVIIDVRYHSTA*SFCPAR
Trigger: CCTGGCAGGACAGAAGGAGCAAGCTGTGGAATGGTA...ACGGACGTCTATAATGACAGTACTAACTTGGCATGCCGCAATGGACATCTCCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR CCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGAGGCACCGGGTTGCTaGCGCCGCCGGAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSIEAPGC*RRRSLS
Trigger: AGAAAGGCTCCGGCGGCGCCAGCAACCCGGTGCCTC...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000646571.1
CDS-3UTR CCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGAAGGGGGCGGAGGCCTaGGAGGCACCGGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVKGAEA*EAPGCW
Trigger: CCAGCAACCCGGTGCCTCCCAGGCCTCCGCCCCCTT...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000646571.1
CDS-3UTR CCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAAAAGAGGAGCCCCAGGTaGAAGGCGACCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKKRSPR*KATKRS
Trigger: GCTGCGTTTGGTCGCCTTCCACCTGGGGCTCCTCTT...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGAAGAGGAGCCCCAGGTaGAAGGCGACCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGKRSPR*KATKRS
Trigger: GCTGCGTTTGGTCGCCTTCCACCTGGGGCTCCTCTT...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAGCGCGGGAGAAGCGCTaGCAGAGCCACACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGAREKR*QSHTKR
Trigger: CCTCTTCGTGTGGCTCTGCCAGCGCTTCTCCCGCGC...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGTCGAAGGCCTGTTTGTaGAAGACTCGGACGCGCTCG +
Preference number: 4 (lower is better)
Translates to: YGYKQHMILRNHASSGWASKACL*KTRTRS
Trigger: CGAGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGA...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp CCCTCTGGCAGGAGCTCTAAGCCCTGTGAACAACTCAGGCCTCAGAGAAGGAAGTGTGCTAGTTCTTTTTaGGTCAATGGACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PSGRSSKPCEQLRPQRRKCASSF*VNGLPC
Trigger: ACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACA...CTTCCTTCTCTGAGGCCTGAGTTGTTCACAGGGCTTAGAGCTCCTGCCAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR TCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCTCCTCTTGGCTGCCATaGGGGCGCGGGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSSSWLP*GRGRSA
Trigger: AGCGCTTCTCCCGCGCCCTCATGGCAGCCAAGAGGA...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGCCACAGACCCCCGTGTaGCCGCCGGTCTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVPQTPV*PPVSGA
Trigger: AGCTCCTGAGACCGGCGGGCACACGGGGGTCTGTGG...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000646571.1
CDS-3UTR GCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATTACAGGTTCCGCTTATaGGGCGACTCGGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNYRFRL*GDSGGG
Trigger: CCCTCCGCCCGAGTCGCCGCATAAGCGGAACCTGTA...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000646571.1
CDS-3UTR GCA 90 bp CGAGCCACAGCAAAAAGAGCCCTCACCAATTTCTCTCCTTCTCCCACGTATTTTTCGGATAGGACCCAGTaGTGCATCTTTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: RATAKRALTNFSPSPTYFSDRTQ*CIFCQS
Trigger: GCTTTGGCAAAAGATGCAGCACTGGGTCCTATCCGA...AAAATACGTGGGAGAAGGAGAGAAATTGGTGAGGGCTCTTTTTGCTGTGGCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR GCA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGGTGGTGAGTCGAGATTaGGCCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: YGYKQHMILRNHASSGWAVVSRD*AIALQP
Trigger: AGGCTGGAGTGCAATGGCGCAATCTCGACTCACCAC...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGAGGAGCCCCAGGTaGAAGGCGACCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: NQVLLCSNLVSIGITVTIKRSPR*KATKRS
Trigger: GCTGCGTTTGGTCGCCTTCCACCTGGGGCTCCTCTT...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp ATTAGTCATCATTTTAGCTTGAAGGCGTCTAGCTCTTTCACACTGTTCACCTTGAAGAGGAGCCCCAGGTaGAAGGCGACCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: ISHHFSLKASSSFTLFTLKRSPR*KATKRS
Trigger: GCTGCGTTTGGTCGCCTTCCACCTGGGGCTCCTCTT...CAAGGTGAACAGTGTGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR CCA 90 bp TTACTGTACATTTTGGGAGAACAAAAGGCAGATCAACAGACTAGAACTAGAACTGCGCGGGAGAAGCGCTaGCAGAGCCACACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LLYILGEQKADQQTRTRTAREKR*QSHTKR
Trigger: CCTCTTCGTGTGGCTCTGCCAGCGCTTCTCCCGCGC...AGTTCTAGTTCTAGTCTGTTGATCTGCCTTTTGTTCTCCCAAAATGTACAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGCGCGGGAGAAGCGCTaGCAGAGCCACACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSIAREKR*QSHTKR
Trigger: CCTCTTCGTGTGGCTCTGCCAGCGCTTCTCCCGCGC...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCGCGCGGGAGAAGCGCTaGCAGAGCCACACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSAREKR*QSHTKR
Trigger: CCTCTTCGTGTGGCTCTGCCAGCGCTTCTCCCGCGC...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAATCGAAGGCCTGTTTGTaGAAGACTCGGACGCGCTCG +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKSKACL*KTRTRS
Trigger: CGAGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGA...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp TTCTCATCTCACTGGCAGACATATTCTTCACCTGTTCTGGTTTTAGTTCTCGGATCGAAGGCCTGTTTGTaGAAGACTCGGACGCGCTCG +
Preference number: 4 (lower is better)
Translates to: FSSHWQTYSSPVLVLVLGSKACL*KTRTRS
Trigger: CGAGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGA...TCCGAGAACTAAAACCAGAACAGGTGAAGAATATGTCTGCCAGTGAGATGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646082.1
CDS-3UTR CCA 90 bp TCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAACAGCCCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SSFGKDTYTRLMKRLRTARCAGQ*RCTRRP
Trigger: AGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCG...GGCTGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646082.1
CDS-3UTR CCA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: YGYKQHMILRNHASSGWARCAGQ*RCTRRP
Trigger: AGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCG...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCTCCTCTTGGCTGCCATaGGGGCGCGGGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFSSWLP*GRGRSA
Trigger: AGCGCTTCTCCCGCGCCCTCATGGCAGCCAAGAGGA...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCATGCTCTATGGTGGCCTaGAAGGCCTGCAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKACSMVA*KACRSS
Trigger: ACTGGATCTGCAGGCCTTTCAGGCCACCATAGAGCA...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp CGAGCCACAGCAAAAAGAGCCCTCACCAATTTCTCTCCTTCTCCCACGTATTTTTACGCTTCTAAAGTTTaGGGGCTGACGCTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: RATAKRALTNFSPSPTYFYASKV*GLTLRF
Trigger: AAAACGCAGCGTCAGCCCTCAAACTTTAGAAGCGTA...AAAATACGTGGGAGAAGGAGAGAAATTGGTGAGGGCTCTTTTTGCTGTGGCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000646082.1
CDS-3UTR GCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCTACAGGTTCCGCTTATaGGGCGACTCGGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSYRFRL*GDSGGG
Trigger: CCCTCCGCCCGAGTCGCCGCATAAGCGGAACCTGTA...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTCTCATCCTCATCGATaGGCAGGGCAATGGAGATGT +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPSHPHR*AGQWRC
Trigger: ACATCTCCATTGCCCTGCGCATCGATGAGGATGAGA...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTCGGATAGGACCCAGTaGTGCATCTTTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPSDRTQ*CIFCQS
Trigger: GCTTTGGCAAAAGATGCAGCACTGGGTCCTATCCGA...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATAAGAGGAGCCCCAGGTaGAAGGCGACCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNKRSPR*KATKRS
Trigger: GCTGCGTTTGGTCGCCTTCCACCTGGGGCTCCTCTT...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGGCGCGGGAGAAGCGCTaGCAGAGCCACACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVAREKR*QSHTKR
Trigger: CCTCTTCGTGTGGCTCTGCCAGCGCTTCTCCCGCGC...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTTCGAAGGCCTGTTTGTaGAAGACTCGGACGCGCTCG +
Preference number: 4 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITSKACL*KTRTRS
Trigger: CGAGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGA...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCTCGAAGGCCTGTTTGTaGAAGACTCGGACGCGCTCG +
Preference number: 4 (lower is better)
Translates to: NQVLLCSNLVSIGITVTISKACL*KTRTRS
Trigger: CGAGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGA...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp ATTAGTCATCATTTTAGCTTGAAGGCGTCTAGCTCTTTCACACTGTTCACCTTGTCGAAGGCCTGTTTGTaGAAGACTCGGACGCGCTCG +
Preference number: 4 (lower is better)
Translates to: ISHHFSLKASSSFTLFTLSKACL*KTRTRS
Trigger: CGAGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGA...CAAGGTGAACAGTGTGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR CCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCACGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKARCAGQ*RCTRRP
Trigger: AGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCG...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAACGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKRCAGQ*RCTRRP
Trigger: AGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCG...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp TCCAGTTCTTCAATACCTTTCTTATACCATTCCACAGCTTGCTCCTTCTGTCCTCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SSSSIPFLYHSTACSFCPRCAGQ*RCTRRP
Trigger: AGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCG...AGGACAGAAGGAGCAAGCTGTGGAATGGTATAAGAAAGGTATTGAAGAACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR TCA 90 bp TTGAAGGCGTCTAGCTCTTTCACACTGTTCACCTTGTCCTGTAACTATAACAGCAACAGCTCCACTTTCTaGCTGGAGATGTCCATTGCG +
Preference number: 4 (lower is better)
Translates to: LKASSSFTLFTLSCNYNSNSSTF*LEMSIA
Trigger: CGCAATGGACATCTCCAGTCAGAAAGTGGAGCTGTT...GCTGTTATAGTTACAGGACAAGGTGAACAGTGTGAAAGAGCTAGACGCCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR TCA 90 bp CTTAAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTGCTCTATGGTGGCCTaGAAGGCCTGCAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: LKQWYLQSPCSNVCTLLKCSMVA*KACRSS
Trigger: ACTGGATCTGCAGGCCTTTCAGGCCACCATAGAGCA...CTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
CDS-3UTR TCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGTTCGGAGTACCCTTATaGGTGGTAGGAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGFGVPL*VVGAGP
Trigger: TGGTCCTGCTCCTACCACTCATAAGGGTACTCCGAA...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCATTCGGAGTACCCTTATaGGTGGTAGGAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKAFGVPL*VVGAGP
Trigger: TGGTCCTGCTCCTACCACTCATAAGGGTACTCCGAA...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp AGTCTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGTTCGGAGTACCCTTATaGGTGGTAGGAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: SLVSSFGKDTYTRLMKRLFGVPL*VVGAGP
Trigger: TGGTCCTGCTCCTACCACTCATAAGGGTACTCCGAA...CAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643327.1
ENST00000643334.1
CDS-3UTR GCA 90 bp TTACTGTACATTTTGGGAGAACAAAAGGCAGATCAACAGACTAGAACTAGAACTATTCACAGCTCTCACTaGCGCCGCCGCCATAACCCG +
Preference number: 4 (lower is better)
Translates to: LLYILGEQKADQQTRTRTIHSSH*RRRHNP
Trigger: CGGGTTATGGCGGCGGCGGCAGTGAGAGCTGTGAAT...AGTTCTAGTTCTAGTCTGTTGATCTGCCTTTTGTTCTCCCAAAATGTACAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000646571.1
CDS-3UTR GCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCTACAGGTTCCGCTTATaGGGCGACTCGGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFYRFRL*GDSGGG
Trigger: CCCTCCGCCCGAGTCGCCGCATAAGCGGAACCTGTA...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTACCATTCCACAGCTTaGTCCTTCTGTCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPYHSTA*SFCPAF
Trigger: GAAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTA...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp GGTGGACCAAAGAGTAACAGCCCTCTGGCAGGAGCTCTAAGCCCTGTGAACAACTATATTAAAGAAGGTTaGATTCGATTCTGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: GGPKSNSPLAGALSPVNNYIKEG*IRFCSY
Trigger: GTAGCTGCAGAATCGAATGCAACCTTCTTTAATATA...GTTGTTCACAGGGCTTAGAGCTCCTGCCAGAGGGCTGTTACTCTTTGGTCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR GCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTCGTCTACTAGCATCGTaGTCCCCTTCTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPRLLAS*SPSLLS
Trigger: TGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACG...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTGATAGGACCCAGTGCTaGATCTTTTGCCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPDRTQC*IFCQSC
Trigger: ACAGCTTTGGCAAAAGATGCAGCACTGGGTCCTATC...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCAAGAGGAGCCCCAGGTaGAAGGCGACCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSKRSPR*KATKRS
Trigger: GCTGCGTTTGGTCGCCTTCCACCTGGGGCTCCTCTT...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp TCAGTGAAGTCAGATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCAAGAGGAGCCCCAGGTaGAAGGCGACCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: SVKSDNRIFLISLADIFFKRSPR*KATKRS
Trigger: GCTGCGTTTGGTCGCCTTCCACCTGGGGCTCCTCTT...GAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCTGACTTCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644408.1
ENST00000646082.1
CDS-3UTR CCA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: NQVLLCSNLVSIGITVTIRCAGQ*RCTRRP
Trigger: AGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCG...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp AGTTCTTCAATACCTTTCTTATACCATTCCACAGCTTGCTCCTTCTGTCCTGCCGCTCCACTTTCTGACTaGAGATGTCCATTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: SSSIPFLYHSTACSFCPAAPLSD*RCPLRH
Trigger: ATGCCGCAATGGACATCTCCAGTCAGAAAGTGGAGC...GGCAGGACAGAAGGAGCAAGCTGTGGAATGGTATAAGAAAGGTATTGAAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645400.1
3UTR CAA 72 bp CAGTTCTTCAATACCTTTCTTATACCATTCCACAGCTaGCTCCTTCTGTCCTGCCAGGCTAGTCTCGAACTC +
Preference number: 4 (lower is better)
Translates to: QFFNTFLIPFHS*LLLSCQASLEL
Trigger: GAGTTCGAGACTAGCCTGGCAGGACAGAAGGAGCAAGCTGTGGAATGGTATAAGAAAGGTATTGAAGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR TCA 90 bp CTGGAGATGTCCATTGCGGCATGCCAAGTTAGTACTGTCATTATAGACGTCCGTATAGACGTCCGTTTGTaGCTTGGAAAATGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: LEMSIAACQVSTVIIDVRIDVRL*LGKWQN
Trigger: GTTTTGCCATTTTCCAAGTCACAAACGGACGTCTAT...ACGGACGTCTATAATGACAGTACTAACTTGGCATGCCGCAATGGACATCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR TCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGAACAGCTCCACTTTCTaGCTGGAGATGTCCATTGCG +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGNSSTF*LEMSIA
Trigger: CGCAATGGACATCTCCAGTCAGAAAGTGGAGCTGTT...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR TCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAAAACAGCTCCACTTTCTaGCTGGAGATGTCCATTGCG +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKNSSTF*LEMSIA
Trigger: CGCAATGGACATCTCCAGTCAGAAAGTGGAGCTGTT...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000645671.1
ENST00000647133.1
CDS-3UTR TCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGATGCTCTATGGTGGCCTaGAAGGCCTGCAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGCSMVA*KACRSS
Trigger: ACTGGATCTGCAGGCCTTTCAGGCCACCATAGAGCA...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATTGCTCTATGGTGGCCTaGAAGGCCTGCAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNCSMVA*KACRSS
Trigger: ACTGGATCTGCAGGCCTTTCAGGCCACCATAGAGCA...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCTTCGGAGTACCCTTATaGGTGGTAGGAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: NQVLLCSNLVSIGITVTIFGVPL*VVGAGP
Trigger: TGGTCCTGCTCCTACCACTCATAAGGGTACTCCGAA...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp ACCCATTACAAGTACTCTGTCATCTCCAGCAGACTGTACACCATCAAATTCTATTTCGGAGTACCCTTATaGGTGGTAGGAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: THYKYSVISSRLYTIKFYFGVPL*VVGAGP
Trigger: TGGTCCTGCTCCTACCACTCATAAGGGTACTCCGAA...ATAGAATTTGATGGTGTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643334.1
CDS-3UTR TCA 90 bp CTTAAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTCGGAGTACCCTTATaGGTGGTAGGAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: LKQWYLQSPCSNVCTLLKFGVPL*VVGAGP
Trigger: TGGTCCTGCTCCTACCACTCATAAGGGTACTCCGAA...CTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
CDS-3UTR TCA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTTTCGGAGTACCCTTATaGGTGGTAGGAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITFGVPL*VVGAGP
Trigger: TGGTCCTGCTCCTACCACTCATAAGGGTACTCCGAA...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp CAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTGAGTCTCATCCTCATCGATaGGCAGGGCAATGGAGATGT +
Preference number: 4 (lower is better)
Translates to: QWYLQSPCSNVCTLLKFESHPHR*AGQWRC
Trigger: ACATCTCCATTGCCCTGCGCATCGATGAGGATGAGA...CTCAAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR GCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGTCTCATCCTCATCGATaGGCAGGGCAATGGAGATGT +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGSHPHR*AGQWRC
Trigger: ACATCTCCATTGCCCTGCGCATCGATGAGGATGAGA...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TCCAGTTCTTCAATACCTTTCTTATACCATTCCACAGCTTGCTCCTTCTGTCCTTCTCATCCTCATCGATaGGCAGGGCAATGGAGATGT +
Preference number: 4 (lower is better)
Translates to: SSSSIPFLYHSTACSFCPSHPHR*AGQWRC
Trigger: ACATCTCCATTGCCCTGCGCATCGATGAGGATGAGA...AGGACAGAAGGAGCAAGCTGTGGAATGGTATAAGAAAGGTATTGAAGAACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR GCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTCGATTCTGCAGCTACTaGTTTAGCCAGCATTGTCTT +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPRFCSY*FSQHCL
Trigger: AAGACAATGCTGGCTAAAGCAGTAGCTGCAGAATCG...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGCGTCTACTAGCATCGTaGTCCCCTTCTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: YGYKQHMILRNHASSGWARLLAS*SPSLLS
Trigger: TGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACG...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGGATAGGACCCAGTGCTaGATCTTTTGCCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: YGYKQHMILRNHASSGWADRTQC*IFCQSC
Trigger: ACAGCTTTGGCAAAAGATGCAGCACTGGGTCCTATC...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315285.9
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCATCGGATAGGACCCAGTaGTGCATCTTTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKASDRTQ*CIFCQS
Trigger: GCTTTGGCAAAAGATGCAGCACTGGGTCCTATCCGA...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAGTGGTGAGTCGAGATTaGGCCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGVVSRD*AIALQP
Trigger: AGGCTGGAGTGCAATGGCGCAATCTCGACTCACCAC...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCAAGAGGAGCCCCAGGTaGAAGGCGACCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFKRSPR*KATKRS
Trigger: GCTGCGTTTGGTCGCCTTCCACCTGGGGCTCCTCTT...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCTCGAAGGCCTGTTTGTaGAAGACTCGGACGCGCTCG +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSSKACL*KTRTRS
Trigger: CGAGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGA...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTTCGAAGGCCTGTTTGTaGAAGACTCGGACGCGCTCG +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSISKACL*KTRTRS
Trigger: CGAGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGA...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTCGAAGGCCTGTTTGTaGAAGACTCGGACGCGCTCG +
Preference number: 4 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSSKACL*KTRTRS
Trigger: CGAGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGA...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNRCAGQ*RCTRRP
Trigger: AGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCG...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGACGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGRCAGQ*RCTRRP
Trigger: AGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCG...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAGCTCCACTTTCTGACTaGAGATGTCCATTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKAAPLSD*RCPLRH
Trigger: ATGCCGCAATGGACATCTCCAGTCAGAAAGTGGAGC...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000645671.1
ENST00000647133.1
CDS-3UTR CCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAAGCTCCACTTTCTGACTaGAGATGTCCATTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKAPLSD*RCPLRH
Trigger: ATGCCGCAATGGACATCTCCAGTCAGAAAGTGGAGC...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000645671.1
ENST00000647133.1
CDS-3UTR CCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTCTCATCAAGCTCTTGTaGCCTATTAGTTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPLIKLL*PISCTH
Trigger: ATGGGTGCAACTAATAGGCCACAAGAGCTTGATGAG...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTGTCATCATTTTAGCTTaGAGGCGTCTAGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPVIILA*RRLALS
Trigger: TGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGAC...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACATGCTCTATGGTGGCCTaGAAGGCCTGCAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: CLLPFTVPGILSSATQYTCSMVA*KACRSS
Trigger: ACTGGATCTGCAGGCCTTTCAGGCCACCATAGAGCA...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCTGCTCTATGGTGGCCTaGAAGGCCTGCAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSCSMVA*KACRSS
Trigger: ACTGGATCTGCAGGCCTTTCAGGCCACCATAGAGCA...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TCAGTGAAGTCAGATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCTGCTCTATGGTGGCCTaGAAGGCCTGCAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: SVKSDNRIFLISLADIFFCSMVA*KACRSS
Trigger: ACTGGATCTGCAGGCCTTTCAGGCCACCATAGAGCA...GAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCTGACTTCACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000644408.1
CDS-3UTR TCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGATTCGGAGTACCCTTATaGGTGGTAGGAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGFGVPL*VVGAGP
Trigger: TGGTCCTGCTCCTACCACTCATAAGGGTACTCCGAA...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGTACGCTTCTAAAGTTTaGGGGCTGACGCTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGYASKV*GLTLRF
Trigger: AAAACGCAGCGTCAGCCCTCAAACTTTAGAAGCGTA...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAATACGCTTCTAAAGTTTaGGGGCTGACGCTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKYASKV*GLTLRF
Trigger: AAAACGCAGCGTCAGCCCTCAAACTTTAGAAGCGTA...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCATACGCTTCTAAAGTTTaGGGGCTGACGCTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKAYASKV*GLTLRF
Trigger: AAAACGCAGCGTCAGCCCTCAAACTTTAGAAGCGTA...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTGTTTCTGTAGCCGATaGCGTTCATTGAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPCFCSR*RSLKIL
Trigger: CAAGATCTTCAATGAACGTCATCGGCTACAGAAACA...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGTACCATTCCACAGCTTaGTCCTTCTGTCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGYHSTA*SFCPAF
Trigger: GAAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTA...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCATACCATTCCACAGCTTaGTCCTTCTGTCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKAYHSTA*SFCPAF
Trigger: GAAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTA...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp CTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGATACCATTCCACAGCTTaGTCCTTCTGTCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LVSSFGKDTYTRLMKRLRYHSTA*SFCPAF
Trigger: GAAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTA...TCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646082.1
CDS-3UTR GCA 90 bp CGAGCCACAGCAAAAAGAGCCCTCACCAATTTCTCTCCTTCTCCCACGTATTTTTTGCAATGCTTGTTTTaGCAAGTCTTGACCAGCTAT +
Preference number: 4 (lower is better)
Translates to: RATAKRALTNFSPSPTYFLQCLF*QVLTSY
Trigger: ATAGCTGGTCAAGACTTGGCAAAACAAGCATTGCAA...AAAATACGTGGGAGAAGGAGAGAAATTGGTGAGGGCTCTTTTTGCTGTGGCTCG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR GCA 90 bp AATTCAGTTTTTAGGCGTCTACTAGCATCGTGCTCCCCTTCTCTTCTTTCACACCGATTCTGCAGCTACTaGTTTAGCCAGCATTGTCTT +
Preference number: 4 (lower is better)
Translates to: NSVFRRLLASCSPSLLSHRFCSY*FSQHCL
Trigger: AAGACAATGCTGGCTAAAGCAGTAGCTGCAGAATCG...GTGTGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACGCCTAAAAACTGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR GCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAACGTCTACTAGCATCGTaGTCCCCTTCTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKRLLAS*SPSLLS
Trigger: TGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACG...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGGATAGGACCCAGTGCTaGATCTTTTGCCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGDRTQC*IFCQSC
Trigger: ACAGCTTTGGCAAAAGATGCAGCACTGGGTCCTATC...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGTCGGATAGGACCCAGTaGTGCATCTTTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: MFETLKGYYPSPNICIALSDRTQ*CIFCQS
Trigger: GCTTTGGCAAAAGATGCAGCACTGGGTCCTATCCGA...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315285.9
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTTCGGATAGGACCCAGTaGTGCATCTTTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITSDRTQ*CIFCQS
Trigger: GCTTTGGCAAAAGATGCAGCACTGGGTCCTATCCGA...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGTGGTGAGTCGAGATTaGGCCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSIVVSRD*AIALQP
Trigger: AGGCTGGAGTGCAATGGCGCAATCTCGACTCACCAC...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TTCCAGTTCTTCAATACCTTTCTTATACCATTCCACAGCTTGCTCCTTCTGTCCACACGTGTGAGCCACTaGACCTGGACTGCATTATTT +
Preference number: 4 (lower is better)
Translates to: FQFFNTFLIPFHSLLLLSTRVSH*TWTALF
Trigger: AAATAATGCAGTCCAGGTGCAGTGGCTCACACGTGT...GGACAGAAGGAGCAAGCTGTGGAATGGTATAAGAAAGGTATTGAAGAACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR GCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGACGATTCTGCAGCTACTaGTTTAGCCTCAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGRFCSY*FSLRPQ
Trigger: CTGAGGCCTGAGGCTAAAGCAGTAGCTGCAGAATCG...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647133.1
CDS-3UTR CCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCGAAGGCCTGTTTGTaGAAGACTCGGACGCGCTCG +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVSKACL*KTRTRS
Trigger: CGAGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGA...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp CTTAAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGGCTCCACTTTCTGACTaGAGATGTCCATTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: LKQWYLQSPCSNVCTLLKAPLSD*RCPLRH
Trigger: ATGCCGCAATGGACATCTCCAGTCAGAAAGTGGAGC...CTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644408.1
ENST00000645671.1
CDS-3UTR CCA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGCTCATCAAGCTCTTGTaGCCTATTAGTTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: YGYKQHMILRNHASSGWALIKLL*PISCTH
Trigger: ATGGGTGCAACTAATAGGCCACAAGAGCTTGATGAG...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGAAATCATGCATCTTCTaGCTGGGCGCAGTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGKSCIF*LGAVAY
Trigger: ATAAGCCACTGCGCCCAGCCAGAAGATGCATGATTT...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp GATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCACCTGTTCTGGTTCGGAGTACCCTGACTaGAGATGTCCATTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: DNRIFLISLADIFFTCSGSEYPD*RCPLRH
Trigger: ATGCCGCAATGGACATCTCCAGTCAGGGTACTCCGA...ACCAGAACAGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646082.1
CDS-3UTR TCA 90 bp ATTAGTTGCACCCATTACAAGTACTCTGTCATCTCCAGCAGACTGTACACCATCGTCATCATTTTAGCTTaGAGGCGTCTAGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: ISCTHYKYSVISSRLYTIVIILA*RRLALS
Trigger: TGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGAC...GATGGTGTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGTGCAACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR TCA 90 bp TGCACCCATTACAAGTACTCTGTCATCTCCAGCAGACTGTACACCATCAAATTCATAGACGTCCGTTTGTaGCTTGGAAAATGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: CTHYKYSVISSRLYTIKFIDVRL*LGKWQN
Trigger: GTTTTGCCATTTTCCAAGTCACAAACGGACGTCTAT...GAATTTGATGGTGTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR TCA 90 bp AAACTTGCAGCACTTATATTAAAGAAGGTTGCATTCGATTCTGCAGCTACTGCTAACAGCTCCACTTTCTaGCTGGAGATGTCCATTGCG +
Preference number: 4 (lower is better)
Translates to: KLAALILKKVAFDSAATANSSTF*LEMSIA
Trigger: CGCAATGGACATCTCCAGTCAGAAAGTGGAGCTGTT...AGCAGTAGCTGCAGAATCGAATGCAACCTTCTTTAATATAAGTGCTGCAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643334.1
CDS-3UTR TCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCTGCTCTATGGTGGCCTaGAAGGCCTGCAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFCSMVA*KACRSS
Trigger: ACTGGATCTGCAGGCCTTTCAGGCCACCATAGAGCA...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTTTCGGAGTACCCTTATaGGTGGTAGGAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSIFGVPL*VVGAGP
Trigger: TGGTCCTGCTCCTACCACTCATAAGGGTACTCCGAA...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCTTCGGAGTACCCTTATaGGTGGTAGGAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSFGVPL*VVGAGP
Trigger: TGGTCCTGCTCCTACCACTCATAAGGGTACTCCGAA...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp CTTAAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTACGCTTCTAAAGTTTaGGGGCTGACGCTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: LKQWYLQSPCSNVCTLLKYASKV*GLTLRF
Trigger: AAAACGCAGCGTCAGCCCTCAAACTTTAGAAGCGTA...CTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR TCA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCTACGCTTCTAAAGTTTaGGGGCTGACGCTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: NQVLLCSNLVSIGITVTIYASKV*GLTLRF
Trigger: AAAACGCAGCGTCAGCCCTCAAACTTTAGAAGCGTA...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAATTGCTCCTTCTGTCCTaGTTTCTCATCCTCATCGAT +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKLLLLS*FLILID
Trigger: ATCGATGAGGATGAGAAAGCAGGACAGAAGGAGCAA...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGTTGCTCCTTCTGTCCTaGTTTCTCATCCTCATCGAT +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGLLLLS*FLILID
Trigger: ATCGATGAGGATGAGAAAGCAGGACAGAAGGAGCAA...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TTCTCATCTCACTGGCAGACATATTCTTCACCTGTTCTGGTTTTAGTTCTCGGATTGCTCCTTCTGTCCTaGTTTCTCATCCTCATCGAT +
Preference number: 4 (lower is better)
Translates to: FSSHWQTYSSPVLVLVLGLLLLS*FLILID
Trigger: ATCGATGAGGATGAGAAAGCAGGACAGAAGGAGCAA...TCCGAGAACTAAAACCAGAACAGGTGAAGAATATGTCTGCCAGTGAGATGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646082.1
CDS-3UTR GCA 90 bp AATTCAGTTTTTAGGCGTCTACTAGCATCGTGCTCCCCTTCTCTTCTTTCACACATGTCCATTGCGGCATaGCAAGTTAGTACTGTCATT +
Preference number: 4 (lower is better)
Translates to: NSVFRRLLASCSPSLLSHMSIAA*QVSTVI
Trigger: AATGACAGTACTAACTTGGCATGCCGCAATGGACAT...GTGTGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACGCCTAAAAACTGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR GCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGCGATTCTGCAGCTACTaGTTTAGCCAGCATTGTCTT +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGRFCSY*FSQHCL
Trigger: AAGACAATGCTGGCTAAAGCAGTAGCTGCAGAATCG...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCACGATTCTGCAGCTACTaGTTTAGCCAGCATTGTCTT +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKARFCSY*FSQHCL
Trigger: AAGACAATGCTGGCTAAAGCAGTAGCTGCAGAATCG...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
CDS-3UTR GCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAACGATTCTGCAGCTACTaGTTTAGCCAGCATTGTCTT +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKRFCSY*FSQHCL
Trigger: AAGACAATGCTGGCTAAAGCAGTAGCTGCAGAATCG...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
CDS-3UTR GCA 90 bp CTTAAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGCGTCTACTAGCATCGTaGTCCCCTTCTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LKQWYLQSPCSNVCTLLKRLLAS*SPSLLS
Trigger: TGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACG...CTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR GCA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGATAGGACCCAGTGCTaGATCTTTTGCCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITDRTQC*IFCQSC
Trigger: ACAGCTTTGGCAAAAGATGCAGCACTGGGTCCTATC...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGGTGGTGAGTCGAGATTaGGCCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVVVSRD*AIALQP
Trigger: AGGCTGGAGTGCAATGGCGCAATCTCGACTCACCAC...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCGATCCTAAGAAATCATaGATCTTCTGGCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: NQVLLCSNLVSIGITVTIDPKKS*IFWLGA
Trigger: TGCGCCCAGCCAGAAGATGCATGATTTCTTAGGATC...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGGATCCTAAGAAATCATaGATCTTCTGGCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: MFETLKGYYPSPNICIALDPKKS*IFWLGA
Trigger: TGCGCCCAGCCAGAAGATGCATGATTTCTTAGGATC...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVRCAGQ*RCTRRP
Trigger: AGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCG...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAGCTCCACTTTCTGACTaGAGATGTCCATTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGAPLSD*RCPLRH
Trigger: ATGCCGCAATGGACATCTCCAGTCAGAAAGTGGAGC...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR CCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCACTCATCAAGCTCTTGTaGCCTATTAGTTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKALIKLL*PISCTH
Trigger: ATGGGTGCAACTAATAGGCCACAAGAGCTTGATGAG...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp CAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTGAGCTCATCAAGCTCTTGTaGCCTATTAGTTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: QWYLQSPCSNVCTLLKFELIKLL*PISCTH
Trigger: ATGGGTGCAACTAATAGGCCACAAGAGCTTGATGAG...CTCAAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR CCA 90 bp CTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGACTCATCAAGCTCTTGTaGCCTATTAGTTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: LVSSFGKDTYTRLMKRLRLIKLL*PISCTH
Trigger: ATGGGTGCAACTAATAGGCCACAAGAGCTTGATGAG...TCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CCA 90 bp TTCACCTGTTCTGGTTTTAGTTCTCGGATAGGACCCAGTGCTGCATCTTTTGCCTATTTCTCATCTCACTaGCAGACATATTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: FTCSGFSSRIGPSAASFAYFSSH*QTYSSP
Trigger: AGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATA...GGCAAAAGATGCAGCACTGGGTCCTATCCGAGAACTAAAACCAGAACAGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTACCATTCACTGTTCCTaGAATACTTTCATCTGCAAC +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPTIHCS*NTFICN
Trigger: GTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGT...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGAAATCATGCATCTTCTaGCTGGGCGCAGTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: MFETLKGYYPSPNICIALKSCIF*LGAVAY
Trigger: ATAAGCCACTGCGCCCAGCCAGAAGATGCATGATTT...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
3UTR CAA 72 bp GTCCTTGGCCATAACCAAATTAGTCATCATTTTAGCTaGAAGGCGTCTAGCTCTTTCACACTGTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: VLGHNQISHHFS*KASSSFTLFTL
Trigger: CAAGGTGAACAGTGTGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACTAATTTGGTTATGGCCAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR TCA 90 bp GTGACTTGGAAAATGGCAAAACTGGTTGCATCTTCTCTAGAAGTTGTAAGCGGTGTCATCATTTTAGCTTaGAGGCGTCTAGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: VTWKMAKLVASSLEVVSGVIILA*RRLALS
Trigger: TGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGAC...ACCGCTTACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATTTTCCAAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR TCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAGTCATCATTTTAGCTTaGAGGCGTCTAGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKAVIILA*RRLALS
Trigger: TGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGAC...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGGTCATCATTTTAGCTTaGAGGCGTCTAGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGVIILA*RRLALS
Trigger: TGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGAC...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAGACGTCCGTTTGTaGCTTGGAAAATGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGIDVRL*LGKWQN
Trigger: GTTTTGCCATTTTCCAAGTCACAAACGGACGTCTAT...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR TCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTAACAGCTCCACTTTCTaGCTGGAGATGTCCATTGCG +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSINSSTF*LEMSIA
Trigger: CGCAATGGACATCTCCAGTCAGAAAGTGGAGCTGTT...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR TCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCTTCGGAGTACCCTTATaGGTGGTAGGAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFFGVPL*VVGAGP
Trigger: TGGTCCTGCTCCTACCACTCATAAGGGTACTCCGAA...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTGTTTTGCCAAGTCTTaGCCAGCTATATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPCFAKS*PAISSN
Trigger: ATTTGATGATATAGCTGGTCAAGACTTGGCAAAACA...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCATGTTTCTGTAGCCGATaGCGTTCATTGAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKACFCSR*RSLKIL
Trigger: CAAGATCTTCAATGAACGTCATCGGCTACAGAAACA...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAATGTTTCTGTAGCCGATaGCGTTCATTGAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKCFCSR*RSLKIL
Trigger: CAAGATCTTCAATGAACGTCATCGGCTACAGAAACA...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTCTCATCCTCATCGATaGGCAGGGCAATGGAGATGT +
Preference number: 4 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSSHPHR*AGQWRC
Trigger: ACATCTCCATTGCCCTGCGCATCGATGAGGATGAGA...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGTCTCATCCTCATCGATaGGCAGGGCAATGGAGATGT +
Preference number: 4 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLSHPHR*AGQWRC
Trigger: ACATCTCCATTGCCCTGCGCATCGATGAGGATGAGA...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TCAGTGAAGTCAGATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCTCTCATCCTCATCGATaGGCAGGGCAATGGAGATGT +
Preference number: 4 (lower is better)
Translates to: SVKSDNRIFLISLADIFFSHPHR*AGQWRC
Trigger: ACATCTCCATTGCCCTGCGCATCGATGAGGATGAGA...GAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCTGACTTCACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644408.1
ENST00000646082.1
CDS-3UTR GCA 90 bp TCCATTGTCCACAATTTCATTCATTATAAGGTTAGCAAGGTTGCTGTCCACATTTCTCATCCTCATCGATaGGCAGGGCAATGGAGATGT +
Preference number: 4 (lower is better)
Translates to: SIVHNFIHYKVSKVAVHISHPHR*AGQWRC
Trigger: ACATCTCCATTGCCCTGCGCATCGATGAGGATGAGA...AATGTGGACAGCAACCTTGCTAACCTTATAATGAATGAAATTGTGGACAATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646082.1
CDS-3UTR GCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCTCTCATCCTCATCGATaGGCAGGGCAATGGAGATGT +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSSHPHR*AGQWRC
Trigger: ACATCTCCATTGCCCTGCGCATCGATGAGGATGAGA...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATTACCATTCCACAGCTTaGTCCTTCTGTCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNYHSTA*SFCPAF
Trigger: GAAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTA...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATGTCCATTGCGGCATaGCAAGTTAGTACTGTCATT +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGMSIAA*QVSTVI
Trigger: AATGACAGTACTAACTTGGCATGCCGCAATGGACAT...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR GCA 90 bp CTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAATGTCCATTGCGGCATaGCAAGTTAGTACTGTCATT +
Preference number: 4 (lower is better)
Translates to: LVSSFGKDTYTRLMKRLRMSIAA*QVSTVI
Trigger: AATGACAGTACTAACTTGGCATGCCGCAATGGACAT...TCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR GCA 90 bp CAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTGAGATGTCCATTGCGGCATaGCAAGTTAGTACTGTCATT +
Preference number: 4 (lower is better)
Translates to: QWYLQSPCSNVCTLLKFEMSIAA*QVSTVI
Trigger: AATGACAGTACTAACTTGGCATGCCGCAATGGACAT...CTCAAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR GCA 90 bp AGTAGTCTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCGATTCTGCAGCTACTaGTTTAGCCAGCATTGTCTT +
Preference number: 4 (lower is better)
Translates to: SSLVSSFGKDTYTRLMKRRFCSY*FSQHCL
Trigger: AAGACAATGCTGGCTAAAGCAGTAGCTGCAGAATCG...GCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAGACTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR GCA 90 bp GATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCACCTGTTCTGGTCGTCTACTAGCATCGTaGTCCCCTTCTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: DNRIFLISLADIFFTCSGRLLAS*SPSLLS
Trigger: TGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACG...ACCAGAACAGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643334.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR GCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATCGTCTACTAGCATCGTaGTCCCCTTCTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNRLLAS*SPSLLS
Trigger: TGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACG...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGTTGTGGCCTATTAGTTaGACCCATTACAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: YGYKQHMILRNHASSGWALWPIS*THYKYS
Trigger: AGAGTACTTGTAATGGGTGCAACTAATAGGCCACAA...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAACAGCCTTGTGGCCTATTAGTTaGACCCATTACAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: SSFGKDTYTRLMKRLRTALWPIS*THYKYS
Trigger: AGAGTACTTGTAATGGGTGCAACTAATAGGCCACAA...GGCTGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR GCA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTCGGATAGGACCCAGTaGTGCATCTTTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSSDRTQ*CIFCQS
Trigger: GCTTTGGCAAAAGATGCAGCACTGGGTCCTATCCGA...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTGTATTTCCCTTCTCTTaGACTGGAAACATTTTCACA +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPVFPFS*TGNIFT
Trigger: TGTGAAAATGTTTCCAGTGCAAGAGAAGGGAAATAC...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTATTTCTCATCTCACTaGCAGACATATTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPYFSSH*QTYSSP
Trigger: AGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATA...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATAAATCATGCATCTTCTaGCTGGGCGCAGTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNKSCIF*LGAVAY
Trigger: ATAAGCCACTGCGCCCAGCCAGAAGATGCATGATTT...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCGTCATCATTTTAGCTTaGAGGCGTCTAGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: NQVLLCSNLVSIGITVTIVIILA*RRLALS
Trigger: TGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGAC...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp CTTAAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGATAGACGTCCGTTTGTaGCTTGGAAAATGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: LKQWYLQSPCSNVCTLLKIDVRL*LGKWQN
Trigger: GTTTTGCCATTTTCCAAGTCACAAACGGACGTCTAT...CTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR TCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCAACAGCTCCACTTTCTaGCTGGAGATGTCCATTGCG +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFNSSTF*LEMSIA
Trigger: CGCAATGGACATCTCCAGTCAGAAAGTGGAGCTGTT...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGTGTTTTGCCAAGTCTTaGCCAGCTATATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: YGYKQHMILRNHASSGWACFAKS*PAISSN
Trigger: ATTTGATGATATAGCTGGTCAAGACTTGGCAAAACA...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGAAAATTATAGAAGGTTaGAGTTCTCGAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGKIIEG*SSRATA
Trigger: TGCTGTGGCTCGAGAACTTCAACCTTCTATAATTTT...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp CAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTGAGAAAATTATAGAAGGTTaGAGTTCTCGAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: QWYLQSPCSNVCTLLKFEKIIEG*SSRATA
Trigger: TGCTGTGGCTCGAGAACTTCAACCTTCTATAATTTT...CTCAAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR TCA 90 bp TTTCTCATCTCACTGGCAGACATATTCTTCACCTGTTCTGGTTTTAGTTCTCGGAAAATTATAGAAGGTTaGAGTTCTCGAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: FLISLADIFFTCSGFSSRKIIEG*SSRATA
Trigger: TGCTGTGGCTCGAGAACTTCAACCTTCTATAATTTT...CCGAGAACTAAAACCAGAACAGGTGAAGAATATGTCTGCCAGTGAGATGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR TCA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTACGCTTCTAAAGTTTaGGGGCTGACGCTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSYASKV*GLTLRF
Trigger: AAAACGCAGCGTCAGCCCTCAAACTTTAGAAGCGTA...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACATACGCTTCTAAAGTTTaGGGGCTGACGCTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: CLLPFTVPGILSSATQYTYASKV*GLTLRF
Trigger: AAAACGCAGCGTCAGCCCTCAAACTTTAGAAGCGTA...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAAATACTGCAGGTCACATaGAGACTGATCTACATGTTA +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKILQVT*RLIYML
Trigger: TAACATGTAGATCAGTCTTCATGTGACCTGCAGTAT...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGCTGAAGTTCAGACTTaGTCAGGAAAGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITAEVQT*SGKQLL
Trigger: TAGAAGTTGCTTTCCTGATCAAGTCTGAACTTCAGC...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCTCTCATCCTCATCGATaGGCAGGGCAATGGAGATGT +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFSHPHR*AGQWRC
Trigger: ACATCTCCATTGCCCTGCGCATCGATGAGGATGAGA...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACATACCATTCCACAGCTTaGTCCTTCTGTCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: CLLPFTVPGILSSATQYTYHSTA*SFCPAF
Trigger: GAAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTA...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTTACCATTCCACAGCTTaGTCCTTCTGTCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSIYHSTA*SFCPAF
Trigger: GAAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTA...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCATGTCCATTGCGGCATaGCAAGTTAGTACTGTCATT +
Preference number: 4 (lower is better)
Translates to: NQVLLCSNLVSIGITVTIMSIAA*QVSTVI
Trigger: AATGACAGTACTAACTTGGCATGCCGCAATGGACAT...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR GCA 90 bp ATTAGTCATCATTTTAGCTTGAAGGCGTCTAGCTCTTTCACACTGTTCACCTTGATGTCCATTGCGGCATaGCAAGTTAGTACTGTCATT +
Preference number: 4 (lower is better)
Translates to: ISHHFSLKASSSFTLFTLMSIAA*QVSTVI
Trigger: AATGACAGTACTAACTTGGCATGCCGCAATGGACAT...CAAGGTGAACAGTGTGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR GCA 90 bp CCATTGTCCACAATTTCATTCATTATAAGGTTAGCAAGGTTGCTGTCCACATTCCGATTCTGCAGCTACTaGTTTAGCCAGCATTGTCTT +
Preference number: 4 (lower is better)
Translates to: PLSTISFIIRLARLLSTFRFCSY*FSQHCL
Trigger: AAGACAATGCTGGCTAAAGCAGTAGCTGCAGAATCG...GAATGTGGACAGCAACCTTGCTAACCTTATAATGAATGAAATTGTGGACAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR GCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTATATTAAAGAAGGTTaGATTCGATTCTGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPYIKEG*IRFCSY
Trigger: GTAGCTGCAGAATCGAATGCAACCTTCTTTAATATA...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGCGTCTACTAGCATCGTaGTCCCCTTCTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLRLLAS*SPSLLS
Trigger: TGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACG...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp TCAGTGAAGTCAGATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCCGTCTACTAGCATCGTaGTCCCCTTCTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SVKSDNRIFLISLADIFFRLLAS*SPSLLS
Trigger: TGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACG...GAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCTGACTTCACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643334.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR GCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCATTGTGGCCTATTAGTTaGACCCATTACAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKALWPIS*THYKYS
Trigger: AGAGTACTTGTAATGGGTGCAACTAATAGGCCACAA...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCGATAGGACCCAGTGCTaGATCTTTTGCCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSDRTQC*IFCQSC
Trigger: ACAGCTTTGGCAAAAGATGCAGCACTGGGTCCTATC...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp TTACTGTACATTTTGGGAGAACAAAAGGCAGATCAACAGACTAGAACTAGAACTGATAGGACCCAGTGCTaGATCTTTTGCCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLYILGEQKADQQTRTRTDRTQC*IFCQSC
Trigger: ACAGCTTTGGCAAAAGATGCAGCACTGGGTCCTATC...AGTTCTAGTTCTAGTCTGTTGATCTGCCTTTTGTTCTCCCAAAATGTACAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCTCGGATAGGACCCAGTaGTGCATCTTTTGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFSDRTQ*CIFCQS
Trigger: GCTTTGGCAAAAGATGCAGCACTGGGTCCTATCCGA...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGATCCTAAGAAATCATaGATCTTCTGGCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSIDPKKS*IFWLGA
Trigger: TGCGCCCAGCCAGAAGATGCATGATTTCTTAGGATC...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGACTCATCAAGCTCTTGTaGCCTATTAGTTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGLIKLL*PISCTH
Trigger: ATGGGTGCAACTAATAGGCCACAAGAGCTTGATGAG...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATCTCATCAAGCTCTTGTaGCCTATTAGTTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNLIKLL*PISCTH
Trigger: ATGGGTGCAACTAATAGGCCACAAGAGCTTGATGAG...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCATGTGCTAGTTCTTTTTaGGTCAATGGACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKACASSF*VNGLPC
Trigger: ACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACA...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAATGTGCTAGTTCTTTTTaGGTCAATGGACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKCASSF*VNGLPC
Trigger: ACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACA...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp GTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAACATGTGCTAGTTCTTTTTaGGTCAATGGACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VSSFGKDTYTRLMKRLRTCASSF*VNGLPC
Trigger: ACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACA...TGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CCA 90 bp CAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTGAGTGTGCTAGTTCTTTTTaGGTCAATGGACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: QWYLQSPCSNVCTLLKFECASSF*VNGLPC
Trigger: ACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACA...CTCAAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR CCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGTGTGCTAGTTCTTTTTaGGTCAATGGACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGCASSF*VNGLPC
Trigger: ACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACA...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAACCATTCACTGTTCCTaGAATACTTTCATCTGCAAC +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKATIHCS*NTFICN
Trigger: GTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGT...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGAAATCATGCATCTTCTaGCTGGGCGCAGTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLKSCIF*LGAVAY
Trigger: ATAAGCCACTGCGCCCAGCCAGAAGATGCATGATTT...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTTCCAAAGTCATGATTaGAAGAGACATGATTTACCT +
Preference number: 4 (lower is better)
Translates to: LCSNLVSIGITVTIKARPFQSHD*KRHDLP
Trigger: AGGTAAATCATGTCTCTTCCAATCATGACTTTGGAA...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATGTCATCATTTTAGCTTaGAGGCGTCTAGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNVIILA*RRLALS
Trigger: TGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGAC...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAGTCATCATTTTAGCTTaGAGGCGTCTAGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGVIILA*RRLALS
Trigger: TGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGAC...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATAGACGTCCGTTTGTaGCTTGGAAAATGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNIDVRL*LGKWQN
Trigger: GTTTTGCCATTTTCCAAGTCACAAACGGACGTCTAT...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR TCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCATGTTTTGCCAAGTCTTaGCCAGCTATATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKACFAKS*PAISSN
Trigger: ATTTGATGATATAGCTGGTCAAGACTTGGCAAAACA...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp CTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGATGTTTTGCCAAGTCTTaGCCAGCTATATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: LVSSFGKDTYTRLMKRLRCFAKS*PAISSN
Trigger: ATTTGATGATATAGCTGGTCAAGACTTGGCAAAACA...TCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR TCA 90 bp GTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAACATGTTTTGCCAAGTCTTaGCCAGCTATATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: VSSFGKDTYTRLMKRLRTCFAKS*PAISSN
Trigger: ATTTGATGATATAGCTGGTCAAGACTTGGCAAAACA...TGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR TCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAATGTTTTGCCAAGTCTTaGCCAGCTATATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKCFAKS*PAISSN
Trigger: ATTTGATGATATAGCTGGTCAAGACTTGGCAAAACA...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTAAAATTATAGAAGGTTaGAGTTCTCGAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITKIIEG*SSRATA
Trigger: TGCTGTGGCTCGAGAACTTCAACCTTCTATAATTTT...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp CTTAAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGAAAATTATAGAAGGTTaGAGTTCTCGAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LKQWYLQSPCSNVCTLLKKIIEG*SSRATA
Trigger: TGCTGTGGCTCGAGAACTTCAACCTTCTATAATTTT...CTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR TCA 90 bp AGTAGTCTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCAAAATTATAGAAGGTTaGAGTTCTCGAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SSLVSSFGKDTYTRLMKRKIIEG*SSRATA
Trigger: TGCTGTGGCTCGAGAACTTCAACCTTCTATAATTTT...GCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAGACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR TCA 90 bp ACCCATTACAAGTACTCTGTCATCTCCAGCAGACTGTACACCATCAAATTCTATAAAATTATAGAAGGTTaGAGTTCTCGAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: THYKYSVISSRLYTIKFYKIIEG*SSRATA
Trigger: TGCTGTGGCTCGAGAACTTCAACCTTCTATAATTTT...ATAGAATTTGATGGTGTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR TCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCTACGCTTCTAAAGTTTaGGGGCTGACGCTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFYASKV*GLTLRF
Trigger: AAAACGCAGCGTCAGCCCTCAAACTTTAGAAGCGTA...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATATTTAAAAGGCCATaGTATGAGTCTCTACTCCCT +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGIFKRP*YESLLP
Trigger: AGGGAGTAGAGACTCATATCATGGCCTTTTAAATAT...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATGCTGAAGTTCAGACTTaGTCAGGAAAGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNAEVQT*SGKQLL
Trigger: TAGAAGTTGCTTTCCTGATCAAGTCTGAACTTCAGC...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTTTCTCTAGCACTAGCTaGAGTTCAGACTTGATCAGG +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSIFSSTS*SSDLIR
Trigger: CCTGATCAAGTCTGAACTTCAGCTAGTGCTAGAGAA...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp TTACTGTACATTTTGGGAGAACAAAAGGCAGATCAACAGACTAGAACTAGAACTTTCTCTAGCACTAGCTaGAGTTCAGACTTGATCAGG +
Preference number: 4 (lower is better)
Translates to: LLYILGEQKADQQTRTRTFSSTS*SSDLIR
Trigger: CCTGATCAAGTCTGAACTTCAGCTAGTGCTAGAGAA...AGTTCTAGTTCTAGTCTGTTGATCTGCCTTTTGTTCTCCCAAAATGTACAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGTTGCTCCTTCTGTCCTaGTTTCTCATCCTCATCGAT +
Preference number: 4 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLLLLLS*FLILID
Trigger: ATCGATGAGGATGAGAAAGCAGGACAGAAGGAGCAA...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCTTGCTCCTTCTGTCCTaGTTTCTCATCCTCATCGAT +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSLLLLS*FLILID
Trigger: ATCGATGAGGATGAGAAAGCAGGACAGAAGGAGCAA...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTTGCTCCTTCTGTCCTaGTTTCTCATCCTCATCGAT +
Preference number: 4 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSLLLLS*FLILID
Trigger: ATCGATGAGGATGAGAAAGCAGGACAGAAGGAGCAA...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAATGGCAAAACTGGTTaGATCTTCTCTAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: VLLCSNLVSIGITVTIKANGKTG*IFSRSC
Trigger: ACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATT...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR GCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGAATGGCAAAACTGGTTaGATCTTCTCTAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGNGKTG*IFSRSC
Trigger: ACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATT...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR GCA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCTTGCAATGCTTGTTTTaGCAAGTCTTGACCAGCTAT +
Preference number: 4 (lower is better)
Translates to: NQVLLCSNLVSIGITVTILQCLF*QVLTSY
Trigger: ATAGCTGGTCAAGACTTGGCAAAACAAGCATTGCAA...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp AGTAGTCTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCTTGCAATGCTTGTTTTaGCAAGTCTTGACCAGCTAT +
Preference number: 4 (lower is better)
Translates to: SSLVSSFGKDTYTRLMKRLQCLF*QVLTSY
Trigger: ATAGCTGGTCAAGACTTGGCAAAACAAGCATTGCAA...GCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAGACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR GCA 90 bp CTTAAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTGCAATGCTTGTTTTaGCAAGTCTTGACCAGCTAT +
Preference number: 4 (lower is better)
Translates to: LKQWYLQSPCSNVCTLLKLQCLF*QVLTSY
Trigger: ATAGCTGGTCAAGACTTGGCAAAACAAGCATTGCAA...CTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR GCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCCGATTCTGCAGCTACTaGTTTAGCCAGCATTGTCTT +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSRFCSY*FSQHCL
Trigger: AAGACAATGCTGGCTAAAGCAGTAGCTGCAGAATCG...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACACGATTCTGCAGCTACTaGTTTAGCCAGCATTGTCTT +
Preference number: 4 (lower is better)
Translates to: CLLPFTVPGILSSATQYTRFCSY*FSQHCL
Trigger: AAGACAATGCTGGCTAAAGCAGTAGCTGCAGAATCG...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGTATATTAAAGAAGGTTaGATTCGATTCTGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: YGYKQHMILRNHASSGWAYIKEG*IRFCSY
Trigger: GTAGCTGCAGAATCGAATGCAACCTTCTTTAATATA...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGCGTCTACTAGCATCGTaGTCCCCTTCTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVRLLAS*SPSLLS
Trigger: TGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACG...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp AGTAGTCTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCTTGTGGCCTATTAGTTaGACCCATTACAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: SSLVSSFGKDTYTRLMKRLWPIS*THYKYS
Trigger: AGAGTACTTGTAATGGGTGCAACTAATAGGCCACAA...GCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAGACTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR GCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGGATAGGACCCAGTGCTaGATCTTTTGCCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVDRTQC*IFCQSC
Trigger: ACAGCTTTGGCAAAAGATGCAGCACTGGGTCCTATC...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCGATAGGACCCAGTGCTaGATCTTTTGCCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFDRTQC*IFCQSC
Trigger: ACAGCTTTGGCAAAAGATGCAGCACTGGGTCCTATC...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGGTATTTCCCTTCTCTTaGACTGGAAACATTTTCACA +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGVFPFS*TGNIFT
Trigger: TGTGAAAATGTTTCCAGTGCAAGAGAAGGGAAATAC...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTCTCATCAAGCTCTTGTaGCCTATTAGTTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSILIKLL*PISCTH
Trigger: ATGGGTGCAACTAATAGGCCACAAGAGCTTGATGAG...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCTGTGCTAGTTCTTTTTaGGTCAATGGACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: NQVLLCSNLVSIGITVTICASSF*VNGLPC
Trigger: ACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACA...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp CAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTGAGTATTTCTCATCTCACTaGCAGACATATTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: QWYLQSPCSNVCTLLKFEYFSSH*QTYSSP
Trigger: AGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATA...CTCAAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR CCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAATATTTCTCATCTCACTaGCAGACATATTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKYFSSH*QTYSSP
Trigger: AGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATA...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCAAATCATGCATCTTCTaGCTGGGCGCAGTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFKSCIF*LGAVAY
Trigger: ATAAGCCACTGCGCCCAGCCAGAAGATGCATGATTT...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGTCATCATTTTAGCTTaGAGGCGTCTAGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLVIILA*RRLALS
Trigger: TGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGAC...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCATAGACGTCCGTTTGTaGCTTGGAAAATGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSIDVRL*LGKWQN
Trigger: GTTTTGCCATTTTCCAAGTCACAAACGGACGTCTAT...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATAGACGTCCGTTTGTaGCTTGGAAAATGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSIDVRL*LGKWQN
Trigger: GTTTTGCCATTTTCCAAGTCACAAACGGACGTCTAT...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TCCATTGTCCACAATTTCATTCATTATAAGGTTAGCAAGGTTGCTGTCCACATTATAGACGTCCGTTTGTaGCTTGGAAAATGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: SIVHNFIHYKVSKVAVHIIDVRL*LGKWQN
Trigger: GTTTTGCCATTTTCCAAGTCACAAACGGACGTCTAT...AATGTGGACAGCAACCTTGCTAACCTTATAATGAATGAAATTGTGGACAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR TCA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTTGTTTTGCCAAGTCTTaGCCAGCTATATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITCFAKS*PAISSN
Trigger: ATTTGATGATATAGCTGGTCAAGACTTGGCAAAACA...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAAAAATTATAGAAGGTTaGAGTTCTCGAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGKIIEG*SSRATA
Trigger: TGCTGTGGCTCGAGAACTTCAACCTTCTATAATTTT...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTTGTTTCTGTAGCCGATaGCGTTCATTGAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSICFCSR*RSLKIL
Trigger: CAAGATCTTCAATGAACGTCATCGGCTACAGAAACA...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TCCATTGTCCACAATTTCATTCATTATAAGGTTAGCAAGGTTGCTGTCCACATTTGTTTCTGTAGCCGATaGCGTTCATTGAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: SIVHNFIHYKVSKVAVHICFCSR*RSLKIL
Trigger: CAAGATCTTCAATGAACGTCATCGGCTACAGAAACA...AATGTGGACAGCAACCTTGCTAACCTTATAATGAATGAAATTGTGGACAATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646082.1
CDS-3UTR TCA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCATATTTAAAAGGCCATaGTATGAGTCTCTACTCCCT +
Preference number: 4 (lower is better)
Translates to: NQVLLCSNLVSIGITVTIIFKRP*YESLLP
Trigger: AGGGAGTAGAGACTCATATCATGGCCTTTTAAATAT...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGATATTTAAAAGGCCATaGTATGAGTCTCTACTCCCT +
Preference number: 4 (lower is better)
Translates to: MFETLKGYYPSPNICIALIFKRP*YESLLP
Trigger: AGGGAGTAGAGACTCATATCATGGCCTTTTAAATAT...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACAGCTGAAGTTCAGACTTaGTCAGGAAAGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: CLLPFTVPGILSSATQYTAEVQT*SGKQLL
Trigger: TAGAAGTTGCTTTCCTGATCAAGTCTGAACTTCAGC...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGCTGAAGTTCAGACTTaGTCAGGAAAGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLAEVQT*SGKQLL
Trigger: TAGAAGTTGCTTTCCTGATCAAGTCTGAACTTCAGC...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCTTCTCTAGCACTAGCTaGAGTTCAGACTTGATCAGG +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFFSSTS*SSDLIR
Trigger: CCTGATCAAGTCTGAACTTCAGCTAGTGCTAGAGAA...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTTCTCTAGCACTAGCTaGAGTTCAGACTTGATCAGG +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVFSSTS*SSDLIR
Trigger: CCTGATCAAGTCTGAACTTCAGCTAGTGCTAGAGAA...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTTGCTCCTTCTGTCCTaGTTTCTCATCCTCATCGAT +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVLLLLS*FLILID
Trigger: ATCGATGAGGATGAGAAAGCAGGACAGAAGGAGCAA...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp CCGTTTGTGACTTGGAAAATGGCAAAACTGGTTGCATCTTCTCTAGAAGTTGTAAATGGCAAAACTGGTTaGATCTTCTCTAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: PFVTWKMAKLVASSLEVVNGKTG*IFSRSC
Trigger: ACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATT...TACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATTTTCCAAGTCACAAACGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR GCA 90 bp TCAGTGAAGTCAGATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCATGTCCATTGCGGCATaGCAAGTTAGTACTGTCATT +
Preference number: 4 (lower is better)
Translates to: SVKSDNRIFLISLADIFFMSIAA*QVSTVI
Trigger: AATGACAGTACTAACTTGGCATGCCGCAATGGACAT...GAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCTGACTTCACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643334.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR GCA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGTATATTAAAGAAGGTTaGATTCGATTCTGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGYIKEG*IRFCSY
Trigger: GTAGCTGCAGAATCGAATGCAACCTTCTTTAATATA...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp CTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGATATATTAAAGAAGGTTaGATTCGATTCTGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LVSSFGKDTYTRLMKRLRYIKEG*IRFCSY
Trigger: GTAGCTGCAGAATCGAATGCAACCTTCTTTAATATA...TCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR GCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGATTGTGGCCTATTAGTTaGACCCATTACAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGLWPIS*THYKYS
Trigger: AGAGTACTTGTAATGGGTGCAACTAATAGGCCACAA...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp AAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTTTGTGGCCTATTAGTTaGACCCATTACAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: KQWYLQSPCSNVCTLLKFLWPIS*THYKYS
Trigger: AGAGTACTTGTAATGGGTGCAACTAATAGGCCACAA...AAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR GCA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAAAATCAGGTTTTGTTGTaGTCTAACTTAGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKNQVLL*SNLVSI
Trigger: AATGGACACTAAGTTAGAGCACAACAAAACCTGATT...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp CAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTGAGAATCAGGTTTTGTTGTaGTCTAACTTAGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: QWYLQSPCSNVCTLLKFENQVLL*SNLVSI
Trigger: AATGGACACTAAGTTAGAGCACAACAAAACCTGATT...CTCAAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642751.1
ENST00000644408.1
CDS-3UTR GCA 90 bp AAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTAATGGCAAAACTGGTTaGATCTTCTCTTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: KQWYLQSPCSNVCTLLKFNGKTG*IFSFSS
Trigger: GGATGAGAAAGAGAAGATGCAACCAGTTTTGCCATT...AAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645671.1
CDS-3UTR CCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGCTCATCAAGCTCTTGTaGCCTATTAGTTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVLIKLL*PISCTH
Trigger: ATGGGTGCAACTAATAGGCCACAAGAGCTTGATGAG...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATTGTGCTAGTTCTTTTTaGGTCAATGGACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNCASSF*VNGLPC
Trigger: ACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACA...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTTATTTCTCATCTCACTaGCAGACATATTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITYFSSH*QTYSSP
Trigger: AGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATA...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGTATTTCTCATCTCACTaGCAGACATATTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: MFETLKGYYPSPNICIALYFSSH*QTYSSP
Trigger: AGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATA...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCTATTTCTCATCTCACTaGCAGACATATTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: NQVLLCSNLVSIGITVTIYFSSH*QTYSSP
Trigger: AGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATA...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAACCATTCACTGTTCCTaGAATACTTTCATCTGCAAC +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGTIHCS*NTFICN
Trigger: GTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGT...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp AAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTACCATTCACTGTTCCTaGAATACTTTCATCTGCAAC +
Preference number: 4 (lower is better)
Translates to: KQWYLQSPCSNVCTLLKFTIHCS*NTFICN
Trigger: GTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGT...AAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642751.1
ENST00000644408.1
CDS-3UTR CCA 90 bp AGTAGTCTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCGGAAAATGGCAAAACTaGTTGCATCTAGAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: SSLVSSFGKDTYTRLMKRGKWQN*LHLEVV
Trigger: TACAACTTCTAGATGCAACCAGTTTTGCCATTTTCC...GCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAGACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643334.1
3UTR CAA 72 bp AAGGCTATCAACTTCATCTATAAAAATTATAGAAGGTaGAAGTTCTCGAGCCACAGCAAAAAGAGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: KAINFIYKNYRR*KFSSHSKKSPH
Trigger: GTGAGGGCTCTTTTTGCTGTGGCTCGAGAACTTCAACCTTCTATAATTTTTATAGATGAAGTTGATAGCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR TCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGGTCATCATTTTAGCTTaGAGGCGTCTAGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVVIILA*RRLALS
Trigger: TGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGAC...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp AAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTTGTTTTGCCAAGTCTTaGCCAGCTATATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: KQWYLQSPCSNVCTLLKFCFAKS*PAISSN
Trigger: ATTTGATGATATAGCTGGTCAAGACTTGGCAAAACA...AAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR TCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATTGTTTTGCCAAGTCTTaGCCAGCTATATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNCFAKS*PAISSN
Trigger: ATTTGATGATATAGCTGGTCAAGACTTGGCAAAACA...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGAAAATTATAGAAGGTTaGAGTTCTCGAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLKIIEG*SSRATA
Trigger: TGCTGTGGCTCGAGAACTTCAACCTTCTATAATTTT...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCTGTTTCTGTAGCCGATaGCGTTCATTGAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFCFCSR*RSLKIL
Trigger: CAAGATCTTCAATGAACGTCATCGGCTACAGAAACA...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTATACTGCAGGTCACATaGAGACTGATCTACATGTTA +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSIILQVT*RLIYML
Trigger: TAACATGTAGATCAGTCTTCATGTGACCTGCAGTAT...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCATACTGCAGGTCACATaGAGACTGATCTACATGTTA +
Preference number: 4 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSILQVT*RLIYML
Trigger: TAACATGTAGATCAGTCTTCATGTGACCTGCAGTAT...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGGCTGAAGTTCAGACTTaGTCAGGAAAGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVAEVQT*SGKQLL
Trigger: TAGAAGTTGCTTTCCTGATCAAGTCTGAACTTCAGC...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATAATGGCAAAACTGGTTaGATCTTCTCTAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNNGKTG*IFSRSC
Trigger: ACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATT...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR GCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCTTGCAATGCTTGTTTTaGCAAGTCTTGACCAGCTAT +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSLQCLF*QVLTSY
Trigger: ATAGCTGGTCAAGACTTGGCAAAACAAGCATTGCAA...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGTTGCAATGCTTGTTTTaGCAAGTCTTGACCAGCTAT +
Preference number: 4 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLLQCLF*QVLTSY
Trigger: ATAGCTGGTCAAGACTTGGCAAAACAAGCATTGCAA...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp TCAGTGAAGTCAGATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCTTGCAATGCTTGTTTTaGCAAGTCTTGACCAGCTAT +
Preference number: 4 (lower is better)
Translates to: SVKSDNRIFLISLADIFFLQCLF*QVLTSY
Trigger: ATAGCTGGTCAAGACTTGGCAAAACAAGCATTGCAA...GAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCTGACTTCACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643334.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR GCA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACATTGCAATGCTTGTTTTaGCAAGTCTTGACCAGCTAT +
Preference number: 4 (lower is better)
Translates to: CLLPFTVPGILSSATQYTLQCLF*QVLTSY
Trigger: ATAGCTGGTCAAGACTTGGCAAAACAAGCATTGCAA...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTTGCAATGCTTGTTTTaGCAAGTCTTGACCAGCTAT +
Preference number: 4 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSLQCLF*QVLTSY
Trigger: ATAGCTGGTCAAGACTTGGCAAAACAAGCATTGCAA...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTTTGTGGCCTATTAGTTaGACCCATTACAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSILWPIS*THYKYS
Trigger: AGAGTACTTGTAATGGGTGCAACTAATAGGCCACAA...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACATTGTGGCCTATTAGTTaGACCCATTACAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: CLLPFTVPGILSSATQYTLWPIS*THYKYS
Trigger: AGAGTACTTGTAATGGGTGCAACTAATAGGCCACAA...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp TCAGTGAAGTCAGATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCTTGTGGCCTATTAGTTaGACCCATTACAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: SVKSDNRIFLISLADIFFLWPIS*THYKYS
Trigger: AGAGTACTTGTAATGGGTGCAACTAATAGGCCACAA...GAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCTGACTTCACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643334.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR GCA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGAATCAGGTTTTGTTGTaGTCTAACTTAGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: MFETLKGYYPSPNICIALNQVLL*SNLVSI
Trigger: AATGGACACTAAGTTAGAGCACAACAAAACCTGATT...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTAATCAGGTTTTGTTGTaGTCTAACTTAGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITNQVLL*SNLVSI
Trigger: AATGGACACTAAGTTAGAGCACAACAAAACCTGATT...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATGTATTTCCCTTCTCTTaGACTGGAAACATTTTCACA +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNVFPFS*TGNIFT
Trigger: TGTGAAAATGTTTCCAGTGCAAGAGAAGGGAAATAC...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAGTATTTCCCTTCTCTTaGACTGGAAACATTTTCACA +
Preference number: 4 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGVFPFS*TGNIFT
Trigger: TGTGAAAATGTTTCCAGTGCAAGAGAAGGGAAATAC...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGTGTGCTAGTTCTTTTTaGGTCAATGGACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLCASSF*VNGLPC
Trigger: ACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACA...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTTGTGCTAGTTCTTTTTaGGTCAATGGACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSICASSF*VNGLPC
Trigger: ACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACA...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATTATTTCTCATCTCACTaGCAGACATATTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNYFSSH*QTYSSP
Trigger: AGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATA...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGACCATTCACTGTTCCTaGAATACTTTCATCTGCAAC +
Preference number: 4 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLTIHCS*NTFICN
Trigger: GTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGT...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCTTCCAAAGTCATGATTaGAAGAGACATGATTTACCT +
Preference number: 4 (lower is better)
Translates to: NQVLLCSNLVSIGITVTIFQSHD*KRHDLP
Trigger: AGGTAAATCATGTCTCTTCCAATCATGACTTTGGAA...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGTTCCAAAGTCATGATTaGAAGAGACATGATTTACCT +
Preference number: 4 (lower is better)
Translates to: MFETLKGYYPSPNICIALFQSHD*KRHDLP
Trigger: AGGTAAATCATGTCTCTTCCAATCATGACTTTGGAA...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
3UTR CAA 72 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCCATTGGGATAACTGTG +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVL*CSNLVSIGITV
Trigger: CACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGTGTTTTGCCAAGTCTTaGCCAGCTATATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLCFAKS*PAISSN
Trigger: ATTTGATGATATAGCTGGTCAAGACTTGGCAAAACA...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCATACTGCAGGTCACATaGAGACTGATCTACATGTTA +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFILQVT*RLIYML
Trigger: TAACATGTAGATCAGTCTTCATGTGACCTGCAGTAT...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATATTTAAAAGGCCATaGTATGAGTCTCTACTCCCT +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSIFKRP*YESLLP
Trigger: AGGGAGTAGAGACTCATATCATGGCCTTTTAAATAT...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR TCA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACAATATTTAAAAGGCCATaGTATGAGTCTCTACTCCCT +
Preference number: 4 (lower is better)
Translates to: CLLPFTVPGILSSATQYTIFKRP*YESLLP
Trigger: AGGGAGTAGAGACTCATATCATGGCCTTTTAAATAT...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR GCA 90 bp TTACTGTACATTTTGGGAGAACAAAAGGCAGATCAACAGACTAGAACTAGAACTAATGGCAAAACTGGTTaGATCTTCTCTAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LLYILGEQKADQQTRTRTNGKTG*IFSRSC
Trigger: ACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATT...AGTTCTAGTTCTAGTCTGTTGATCTGCCTTTTGTTCTCCCAAAATGTACAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315285.9
ENST00000642999.1
ENST00000647133.1
CDS-3UTR GCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTTGCAATGCTTGTTTTaGCAAGTCTTGACCAGCTAT +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVLQCLF*QVLTSY
Trigger: ATAGCTGGTCAAGACTTGGCAAAACAAGCATTGCAA...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCTTGCAATGCTTGTTTTaGCAAGTCTTGACCAGCTAT +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFLQCLF*QVLTSY
Trigger: ATAGCTGGTCAAGACTTGGCAAAACAAGCATTGCAA...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp AAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTTATATTAAAGAAGGTTaGATTCGATTCTGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: KQWYLQSPCSNVCTLLKFYIKEG*IRFCSY
Trigger: GTAGCTGCAGAATCGAATGCAACCTTCTTTAATATA...AAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR GCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTTGTGGCCTATTAGTTaGACCCATTACAAGTACTCT +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVLWPIS*THYKYS
Trigger: AGAGTACTTGTAATGGGTGCAACTAATAGGCCACAA...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATAATCAGGTTTTGTTGTaGTCTAACTTAGTGTCCATT +
Preference number: 4 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNNQVLL*SNLVSI
Trigger: AATGGACACTAAGTTAGAGCACAACAAAACCTGATT...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGTATTTCCCTTCTCTTaGACTGGAAACATTTTCACA +
Preference number: 4 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLVFPFS*TGNIFT
Trigger: TGTGAAAATGTTTCCAGTGCAAGAGAAGGGAAATAC...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTGTGCTAGTTCTTTTTaGGTCAATGGACTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVCASSF*VNGLPC
Trigger: ACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACA...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCTGTTTTGCCAAGTCTTaGCCAGCTATATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFCFAKS*PAISSN
Trigger: ATTTGATGATATAGCTGGTCAAGACTTGGCAAAACA...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR TCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTGTTTTGCCAAGTCTTaGCCAGCTATATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVCFAKS*PAISSN
Trigger: ATTTGATGATATAGCTGGTCAAGACTTGGCAAAACA...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp AAAAGTAGTCTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAAAATGGCAAAACTGGTTaGATCTTCTCTAGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: KSSLVSSFGKDTYTRLMKNGKTG*IFSRSC
Trigger: ACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATT...TTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAGACTACTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646082.1
CDS-3UTR GCA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCTATATTAAAGAAGGTTaGATTCGATTCTGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSYIKEG*IRFCSY
Trigger: GTAGCTGCAGAATCGAATGCAACCTTCTTTAATATA...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTTATATTAAAGAAGGTTaGATTCGATTCTGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSIYIKEG*IRFCSY
Trigger: GTAGCTGCAGAATCGAATGCAACCTTCTTTAATATA...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTATATTAAAGAAGGTTaGATTCGATTCTGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSYIKEG*IRFCSY
Trigger: GTAGCTGCAGAATCGAATGCAACCTTCTTTAATATA...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR GCA 90 bp TCAGTGAAGTCAGATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCTATATTAAAGAAGGTTaGATTCGATTCTGCAGCTAC +
Preference number: 4 (lower is better)
Translates to: SVKSDNRIFLISLADIFFYIKEG*IRFCSY
Trigger: GTAGCTGCAGAATCGAATGCAACCTTCTTTAATATA...GAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCTGACTTCACTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643334.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR CCA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTATTTCTCATCTCACTaGCAGACATATTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVYFSSH*QTYSSP
Trigger: AGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATA...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCTATTTCTCATCTCACTaGCAGACATATTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFYFSSH*QTYSSP
Trigger: AGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATA...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CCA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGTTCCAAAGTCATGATTaGAAGAGACATGATTTACCT +
Preference number: 4 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLFQSHD*KRHDLP
Trigger: AGGTAAATCATGTCTCTTCCAATCATGACTTTGGAA...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CCA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACATTCCAAAGTCATGATTaGAAGAGACATGATTTACCT +
Preference number: 4 (lower is better)
Translates to: CLLPFTVPGILSSATQYTFQSHD*KRHDLP
Trigger: AGGTAAATCATGTCTCTTCCAATCATGACTTTGGAA...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
3UTR CAA 72 bp TATGATTATATTGGTAAAGAAGACCAGAATCAGGTTTaGTTGTGCTCTAACTTAGTGTCCATTGGGATAACT +
Preference number: 4 (lower is better)
Translates to: YDYIGKEDQNQV*LCSNLVSIGIT
Trigger: AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATCATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS GCA 90 bp CGACGGCGGCAGCCACTGCTACGGCGGGGGCCACAGACCCCCGTGTaGCCGCCGGTCTCAGGAGCTCCGCACTGCCGCACGCTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: RRRQPLLRRGPQTPV*PPVSGAPHCRTLPA
Trigger: GGCGGGCAGCGTGCGGCAGTGCGGAGCTCCTGAGACCGGCGGGCACACGGGGGTCTGTGGCCCCCGCCGTAGCAGTGGCTGCCGCCGTCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000646571.1
CDS GCA 90 bp CCGCCTCCCGCAGACCGACGGGAACCAAGCGACGGCGGCAGCCACTaGTACGGCGGGGGCCACAGACCCCCGTGTGCCCGCCGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: PPPADRREPSDGGSH*YGGGHRPPCARRSQ
Trigger: CTGAGACCGGCGGGCACACGGGGGTCTGTGGCCCCCGCCGTAGCAGTGGCTGCCGCCGTCGCTTGGTTCCCGTCGGTCTGCGGGAGGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000646571.1
CDS GCA 90 bp GGGCGGGGGCCAGGCAAGGGGGCGGAGGCCTGGGAGGCACCGGGTTaGTGGCGCCGCCGGAGCCTTTCTTCTTCCCTCGTCCACCCGGAG +
Preference number: 5 (lower is better)
Translates to: GRGPGKGAEAWEAPG*WRRRSLSSSLVHPE
Trigger: CTCCGGGTGGACGAGGGAAGAAGAAAGGCTCCGGCGGCGCCAGCAACCCGGTGCCTCCCAGGCCTCCGCCCCCTTGCCTGGCCCCCGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315285.9
ENST00000621856.2
ENST00000642455.1
ENST00000646571.1
CDS CCA 90 bp CGGGGGCCAGGCAAGGGGGCGGAGGCCTGGGAGGCACCGGGTTGCTaGCGCCGCCGGAGCCTTTCTTCTTCCCTCGTCCACCCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: RGPGKGAEAWEAPGC*RRRSLSSSLVHPEN
Trigger: ATTCTCCGGGTGGACGAGGGAAGAAGAAAGGCTCCGGCGGCGCCAGCAACCCGGTGCCTCCCAGGCCTCCGCCCCCTTGCCTGGCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315285.9
ENST00000621856.2
ENST00000642455.1
ENST00000646571.1
CDS CCA 90 bp TCATCGATGCGCAGGGCAATGGAGATGTACTCGAAGGCCTGTTTGTaGAAGACTCGGACGCGCTCGGCCTCGCCGCCCGGCACCGGCGCC +
Preference number: 5 (lower is better)
Translates to: SSMRRAMEMYSKACL*KTRTRSASPPGTGA
Trigger: GGCGCCGGTGCCGGGCGGCGAGGCCGAGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315285.9
ENST00000621856.2
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645400.1
ENST00000646082.1
ENST00000646571.1
CDS GCA 90 bp TTCTTCTTCCCTCGTCCACCCGGAGAATTCATTCACAGCTCTCACTaGCGCCGCCGCCATAACCCGCCTCCCGCAGACCGACGGGAACCA +
Preference number: 5 (lower is better)
Translates to: FFFPRPPGEFIHSSH*RRRHNPPPADRREP
Trigger: TGGTTCCCGTCGGTCTGCGGGAGGCGGGTTATGGCGGCGGCGGCAGTGAGAGCTGTGAATGAATTCTCCGGGTGGACGAGGGAAGAAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000646571.1
CDS TCA 90 bp CACAGCTTGCTCCTTCTGTCCTGTGGTTCCAGCTACTCGGGAGACTaGGGCAAGAGAATCGCCTGCGTCTGGGAGGCAGAGGTTGCAGTA +
Preference number: 5 (lower is better)
Translates to: HSLLLLSCGSSYSGD*GKRIACVWEAEVAV
Trigger: TACTGCAACCTCTGCCTCCCAGACGCAGGCGATTCTCTTGCCTCAGTCTCCCGAGTAGCTGGAACCACAGGACAGAAGGAGCAAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647007.1
CDS CCA 90 bp GCTCCTTCTGTCCTGCTTTCTCATCCTCATCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCTGTTTGTGGAAGACTCGGACGCGCT +
Preference number: 5 (lower is better)
Translates to: APSVLLSHPHRCAGQ*RCTRRPVCGRLGRA
Trigger: AGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGATGAGGATGAGAAAGCAGGACAGAAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646082.1
ENST00000646571.1
CDS-3UTR CAA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAGCCCCGGAGCTCCTCTaGGCTGCCATGAGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: VLLCSNLVSIGITVTIKAAPELL*AAMRAR
Trigger: CCGCGCCCTCATGGCAGCCAAGAGGAGCTCCGGGGC...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS CCA 90 bp CTTGCTCCTTCTGTCCTTTCTCATCCTCATCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCTGTTTGTGGAAGACTCGGACGCGCT +
Preference number: 5 (lower is better)
Translates to: LAPSVLSHPHRCAGQ*RCTRRPVCGRLGRA
Trigger: AGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGATGAGGATGAGAAAGGACAGAAGGAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621856.2
ENST00000642455.1
CDS-3UTR CAA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAGCCCCGGAGCTCCTCTaGGCTGCCATGAGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGAPELL*AAMRAR
Trigger: CCGCGCCCTCATGGCAGCCAAGAGGAGCTCCGGGGC...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATGCCCCGGAGCTCCTCTaGGCTGCCATGAGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNAPELL*AAMRAR
Trigger: CCGCGCCCTCATGGCAGCCAAGAGGAGCTCCGGGGC...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp AAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTGCCCCGGAGCTCCTCTaGGCTGCCATGAGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: KQWYLQSPCSNVCTLLKFAPELL*AAMRAR
Trigger: CCGCGCCCTCATGGCAGCCAAGAGGAGCTCCGGGGC...AAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR CAA 90 bp CCAAAGAGTAACAGCCCTCTGGCAGGAGCTCTAAGCCCTGTGAACAACTCAGGCGACTGGAGATGTCCATaGCGGCATGCCAAGTTAGTA +
Preference number: 5 (lower is better)
Translates to: PKSNSPLAGALSPVNNSGDWRCP*RHAKLV
Trigger: TACTAACTTGGCATGCCGCAATGGACATCTCCAGTC...GCCTGAGTTGTTCACAGGGCTTAGAGCTCCTGCCAGAGGGCTGTTACTCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCGCCCCGGAGCTCCTCTaGGCTGCCATGAGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSAPELL*AAMRAR
Trigger: CCGCGCCCTCATGGCAGCCAAGAGGAGCTCCGGGGC...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTACTCGAAGGCCTGTTaGTGGAAGACTCGGACGCGC +
Preference number: 5 (lower is better)
Translates to: LCSNLVSIGITVTIKARPYSKAC*WKTRTR
Trigger: GCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTA...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp CCCTCTGGCAGGAGCTCTAAGCCCTGTGAACAACTCAGGCCTCAGAGAAGGAAGAGTCATCATTTTAGCTaGAAGGCGTCTAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: PSGRSSKPCEQLRPQRRKSHHFS*KASSSF
Trigger: GAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACT...CTTCCTTCTCTGAGGCCTGAGTTGTTCACAGGGCTTAGAGCTCCTGCCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp CCCTCTGGCAGGAGCTCTAAGCCCTGTGAACAACTCAGGCCTCAGAGAAGGAAGGTCTTGTCTCCTCATTaGGTAAAGACACATATACCC +
Preference number: 5 (lower is better)
Translates to: PSGRSSKPCEQLRPQRRKVLSPH*VKTHIP
Trigger: GGGTATATGTGTCTTTACCAAATGAGGAGACAAGAC...CTTCCTTCTCTGAGGCCTGAGTTGTTCACAGGGCTTAGAGCTCCTGCCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TTCCAGTTCTTCAATACCTTTCTTATACCATTCCACAGCTTGCTCCTTCTGTCCTACTCGAAGGCCTGTTaGTGGAAGACTCGGACGCGC +
Preference number: 5 (lower is better)
Translates to: FQFFNTFLIPFHSLLLLSYSKAC*WKTRTR
Trigger: GCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTA...GGACAGAAGGAGCAAGCTGTGGAATGGTATAAGAAAGGTATTGAAGAACTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR CAA 90 bp CAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTGAGTACTCGAAGGCCTGTTaGTGGAAGACTCGGACGCGC +
Preference number: 5 (lower is better)
Translates to: QWYLQSPCSNVCTLLKFEYSKAC*WKTRTR
Trigger: GCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTA...CTCAAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TTCACCTGTTCTGGTTTTAGTTCTCGGATAGGACCCAGTGCTGCATCTTTTGCCGACTGGAGATGTCCATaGCGGCATGCCAAGTTAGTA +
Preference number: 5 (lower is better)
Translates to: FTCSGFSSRIGPSAASFADWRCP*RHAKLV
Trigger: TACTAACTTGGCATGCCGCAATGGACATCTCCAGTC...GGCAAAAGATGCAGCACTGGGTCCTATCCGAGAACTAAAACCAGAACAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS GCA 90 bp CCTTTTTCCAGTTCTTCAATACCTTTCTTATACCATTCCACAGCTTaGTCCTTCTGTCCTGTGGTTCCAGCTACTCGGGAGACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: PFSSSSIPFLYHSTA*SFCPVVPATRETEA
Trigger: TGCCTCAGTCTCCCGAGTAGCTGGAACCACAGGACAGAAGGAGCAAGCTGTGGAATGGTATAAGAAAGGTATTGAAGAACTGGAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647007.1
CDS-3UTR CAA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTCCAGTGCTGCATCTTTaGCCAAAGCTGTTAGGTCAC +
Preference number: 5 (lower is better)
Translates to: LCSNLVSIGITVTIKARPPVLHL*PKLLGH
Trigger: GTGACCTAACAGCTTTGGCAAAAGATGCAGCACTGG...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATTACTCGAAGGCCTGTTaGTGGAAGACTCGGACGCGC +
Preference number: 5 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNYSKAC*WKTRTR
Trigger: GCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTA...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGATACTCGAAGGCCTGTTaGTGGAAGACTCGGACGCGC +
Preference number: 5 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGYSKAC*WKTRTR
Trigger: GCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTA...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTATACCATTCCACAGCTaGCTCCTTCTGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LCSNLVSIGITVTIKARPIPFHS*LLLSCF
Trigger: AAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTAT...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp CTGGAGATGTCCATTGCGGCATGCCAAGTTAGTACTGTCATTATAGACGTCCGTACGTCCGTTTGTGACTaGGAAAATGGCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: LEMSIAACQVSTVIIDVRTSVCD*ENGKTG
Trigger: ACCAGTTTTGCCATTTTCCAAGTCACAAACGGACGT...ACGGACGTCTATAATGACAGTACTAACTTGGCATGCCGCAATGGACATCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR CAA 90 bp GCACCCATTACAAGTACTCTGTCATCTCCAGCAGACTGTACACCATCAAATTCTCCAGTGCTGCATCTTTaGCCAAAGCTGTTAGGTCAC +
Preference number: 5 (lower is better)
Translates to: APITSTLSSPADCTPSNSPVLHL*PKLLGH
Trigger: GTGACCTAACAGCTTTGGCAAAAGATGCAGCACTGG...AGAATTTGATGGTGTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TGCACCCATTACAAGTACTCTGTCATCTCCAGCAGACTGTACACCATCAAATTCCCAGTGCTGCATCTTTaGCCAAAGCTGTTAGGTCAC +
Preference number: 5 (lower is better)
Translates to: CTHYKYSVISSRLYTIKFPVLHL*PKLLGH
Trigger: GTGACCTAACAGCTTTGGCAAAAGATGCAGCACTGG...GAATTTGATGGTGTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGTACTCGAAGGCCTGTTaGTGGAAGACTCGGACGCGC +
Preference number: 5 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLYSKAC*WKTRTR
Trigger: GCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTA...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACATACTCGAAGGCCTGTTaGTGGAAGACTCGGACGCGC +
Preference number: 5 (lower is better)
Translates to: CLLPFTVPGILSSATQYTYSKAC*WKTRTR
Trigger: GCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTA...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTTACTCGAAGGCCTGTTaGTGGAAGACTCGGACGCGC +
Preference number: 5 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSIYSKAC*WKTRTR
Trigger: GCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTA...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp TTACTGTACATTTTGGGAGAACAAAAGGCAGATCAACAGACTAGAACTAGAACTTACTCGAAGGCCTGTTaGTGGAAGACTCGGACGCGC +
Preference number: 5 (lower is better)
Translates to: LLYILGEQKADQQTRTRTYSKAC*WKTRTR
Trigger: GCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTA...AGTTCTAGTTCTAGTCTGTTGATCTGCCTTTTGTTCTCCCAAAATGTACAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp AGTTCTCGGATAGGACCCAGTGCTGCATCTTTTGCCAAAGCTGTTAGGTCACTTTTCACACTGTTCACCTaGTCCTGTAACTATAACAGC +
Preference number: 5 (lower is better)
Translates to: SSRIGPSAASFAKAVRSLFTLFT*SCNYNS
Trigger: GCTGTTATAGTTACAGGACAAGGTGAACAGTGTGAA...AAGTGACCTAACAGCTTTGGCAAAAGATGCAGCACTGGGTCCTATCCGAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp CTGGAGATGTCCATTGCGGCATGCCAAGTTAGTACTGTCATTATAGACGTCCGTTTCACACTGTTCACCTaGTCCTGTAACTATAACAGC +
Preference number: 5 (lower is better)
Translates to: LEMSIAACQVSTVIIDVRFTLFT*SCNYNS
Trigger: GCTGTTATAGTTACAGGACAAGGTGAACAGTGTGAA...ACGGACGTCTATAATGACAGTACTAACTTGGCATGCCGCAATGGACATCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR CAA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAGACTGGAGATGTCCATaGCGGCATGCCAAGTTAGTA +
Preference number: 5 (lower is better)
Translates to: VLLCSNLVSIGITVTIKADWRCP*RHAKLV
Trigger: TACTAACTTGGCATGCCGCAATGGACATCTCCAGTC...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000645671.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTGACACATATACCCGTTaGATGAAACGCCTGAGAACA +
Preference number: 5 (lower is better)
Translates to: LCSNLVSIGITVTIKARPDTYTR*MKRLRT
Trigger: TGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTC...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp CGAGCCACAGCAAAAAGAGCCCTCACCAATTTCTCTCCTTCTCCCACGTATTTTGTCTTGTCTCCTCATTaGGTAAAGACACATATACCC +
Preference number: 5 (lower is better)
Translates to: RATAKRALTNFSPSPTYFVLSPH*VKTHIP
Trigger: GGGTATATGTGTCTTTACCAAATGAGGAGACAAGAC...AAAATACGTGGGAGAAGGAGAGAAATTGGTGAGGGCTCTTTTTGCTGTGGCTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp CCGTTTGTGACTTGGAAAATGGCAAAACTGGTTGCATCTTCTCTAGAAGTTGTAATACCATTCCACAGCTaGCTCCTTCTGTCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: PFVTWKMAKLVASSLEVVIPFHS*LLLSCQ
Trigger: CTGGCAGGACAGAAGGAGCAAGCTGTGGAATGGTAT...TACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATTTTCCAAGTCACAAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR CAA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTACTCGAAGGCCTGTTaGTGGAAGACTCGGACGCGC +
Preference number: 5 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVYSKAC*WKTRTR
Trigger: GCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTA...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAATACCATTCCACAGCTaGCTCCTTCTGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: VLLCSNLVSIGITVTIKAIPFHS*LLLSCF
Trigger: AAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTAT...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTTCACACTGTTCACCTaGTCCTGTAACTATAACAGC +
Preference number: 5 (lower is better)
Translates to: LCSNLVSIGITVTIKARPFTLFT*SCNYNS
Trigger: GCTGTTATAGTTACAGGACAAGGTGAACAGTGTGAA...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTAGTCATCATTTTAGCTaGAAGGCGTCTAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LCSNLVSIGITVTIKARPSHHFS*KASSSF
Trigger: GAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACT...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TGCACCCATTACAAGTACTCTGTCATCTCCAGCAGACTGTACACCATCAAATTCAGTTGTAAGCGGTCCTaGGCCATAACCAAATTAGTC +
Preference number: 5 (lower is better)
Translates to: CTHYKYSVISSRLYTIKFSCKRS*AITKLV
Trigger: GACTAATTTGGTTATGGCCAAGGACCGCTTACAACT...GAATTTGATGGTGTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGGACTGGAGATGTCCATaGCGGCATGCCAAGTTAGTA +
Preference number: 5 (lower is better)
Translates to: MFETLKGYYPSPNICIALDWRCP*RHAKLV
Trigger: TACTAACTTGGCATGCCGCAATGGACATCTCCAGTC...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000642999.1
CDS-3UTR CAA 90 bp ATTAGTCATCATTTTAGCTTGAAGGCGTCTAGCTCTTTCACACTGTTCACCTTGGACTGGAGATGTCCATaGCGGCATGCCAAGTTAGTA +
Preference number: 5 (lower is better)
Translates to: ISHHFSLKASSSFTLFTLDWRCP*RHAKLV
Trigger: TACTAACTTGGCATGCCGCAATGGACATCTCCAGTC...CAAGGTGAACAGTGTGAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR CAA 90 bp TTCACCTGTTCTGGTTTTAGTTCTCGGATAGGACCCAGTGCTGCATCTTTTGCCATAAGGTTAGCAAGGTaGCTGTCCACATTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: FTCSGFSSRIGPSAASFAIRLAR*LSTFLK
Trigger: TTTTAGGAATGTGGACAGCAACCTTGCTAACCTTAT...GGCAAAAGATGCAGCACTGGGTCCTATCCGAGAACTAAAACCAGAACAGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTCTTCTCCCACGTATTTaGAAGTTAAACTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: LCSNLVSIGITVTIKARPLLPRI*KLNLQH
Trigger: GTGCTGCAAGTTTAACTTCAAAATACGTGGGAGAAG...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp CGAGCCACAGCAAAAAGAGCCCTCACCAATTTCTCTCCTTCTCCCACGTATTTTAAAAATTATAGAAGGTaGAAGTTCTCGAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: RATAKRALTNFSPSPTYFKNYRR*KFSSHS
Trigger: GCTGTGGCTCGAGAACTTCAACCTTCTATAATTTTT...AAAATACGTGGGAGAAGGAGAGAAATTGGTGAGGGCTCTTTTTGCTGTGGCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTCCAGTGCTGCATCTTTaGCCAAAGCTGTTAGGTCAC +
Preference number: 5 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITPVLHL*PKLLGH
Trigger: GTGACCTAACAGCTTTGGCAAAAGATGCAGCACTGG...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCCCAGTGCTGCATCTTTaGCCAAAGCTGTTAGGTCAC +
Preference number: 5 (lower is better)
Translates to: NQVLLCSNLVSIGITVTIPVLHL*PKLLGH
Trigger: GTGACCTAACAGCTTTGGCAAAAGATGCAGCACTGG...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTCAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCC +
Preference number: 5 (lower is better)
Translates to: LCSNLVSIGITVTIKARPQNQVL*CSNLVS
Trigger: GGACACTAAGTTAGAGCACAACAAAACCTGATTCTG...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTGACCAGAATCAGGTTTaGTTGTGCTCTAACTTAGTG +
Preference number: 5 (lower is better)
Translates to: LCSNLVSIGITVTIKARPDQNQV*LCSNLV
Trigger: CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTC...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTATACCATTCCACAGCTaGCTCCTTCTGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITIPFHS*LLLSCF
Trigger: AAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTAT...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp GCACCCATTACAAGTACTCTGTCATCTCCAGCAGACTGTACACCATCAAATTCTTTCACACTGTTCACCTaGTCCTGTAACTATAACAGC +
Preference number: 5 (lower is better)
Translates to: APITSTLSSPADCTPSNSFTLFT*SCNYNS
Trigger: GCTGTTATAGTTACAGGACAAGGTGAACAGTGTGAA...AGAATTTGATGGTGTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGAGTCATCATTTTAGCTaGAAGGCGTCTAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: YGYKQHMILRNHASSGWASHHFS*KASSSF
Trigger: GAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACT...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp CAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTGAGAGTTGTAAGCGGTCCTaGGCCATAACCAAATTAGTC +
Preference number: 5 (lower is better)
Translates to: QWYLQSPCSNVCTLLKFESCKRS*AITKLV
Trigger: GACTAATTTGGTTATGGCCAAGGACCGCTTACAACT...CTCAAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR CAA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGACGTCCGTTTGTGACTaGGAAAATGGCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGTSVCD*ENGKTG
Trigger: ACCAGTTTTGCCATTTTCCAAGTCACAAACGGACGT...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TTCTCATCTCACTGGCAGACATATTCTTCACCTGTTCTGGTTTTAGTTCTCGGAACGTCCGTTTGTGACTaGGAAAATGGCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: FSSHWQTYSSPVLVLVLGTSVCD*ENGKTG
Trigger: ACCAGTTTTGCCATTTTCCAAGTCACAAACGGACGT...TCCGAGAACTAAAACCAGAACAGGTGAAGAATATGTCTGCCAGTGAGATGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAACGTCCGTTTGTGACTaGGAAAATGGCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: VLLCSNLVSIGITVTIKATSVCD*ENGKTG
Trigger: ACCAGTTTTGCCATTTTCCAAGTCACAAACGGACGT...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000645671.1
ENST00000647133.1
CDS-3UTR CAA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAAACGTCCGTTTGTGACTaGGAAAATGGCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKTSVCD*ENGKTG
Trigger: ACCAGTTTTGCCATTTTCCAAGTCACAAACGGACGT...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000645671.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AGTTCTCGGATAGGACCCAGTGCTGCATCTTTTGCCAAAGCTGTTAGGTCACTTTTGTTTTGCCAAGTCTaGACCAGCTATATCATCAAA +
Preference number: 5 (lower is better)
Translates to: SSRIGPSAASFAKAVRSLLFCQV*TSYIIK
Trigger: TTTGATGATATAGCTGGTCAAGACTTGGCAAAACAA...AAGTGACCTAACAGCTTTGGCAAAAGATGCAGCACTGGGTCCTATCCGAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTAATTTCTTGCAATGCTaGTTTTGCCAAGTCTTGACC +
Preference number: 5 (lower is better)
Translates to: LCSNLVSIGITVTIKARPNFLQC*FCQVLT
Trigger: GGTCAAGACTTGGCAAAACAAGCATTGCAAGAAATT...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGCTTCTCCCACGTATTTaGAAGTTAAACTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: YGYKQHMILRNHASSGWALLPRI*KLNLQH
Trigger: GTGCTGCAAGTTTAACTTCAAAATACGTGGGAGAAG...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTAAAAATTATAGAAGGTaGAAGTTCTCGAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: LCSNLVSIGITVTIKARPKNYRR*KFSSHS
Trigger: GCTGTGGCTCGAGAACTTCAACCTTCTATAATTTTT...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGGACACATATACCCGTTaGATGAAACGCCTGAGAACA +
Preference number: 5 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGDTYTR*MKRLRT
Trigger: TGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTC...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AGTCTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGGACACATATACCCGTTaGATGAAACGCCTGAGAACA +
Preference number: 5 (lower is better)
Translates to: SLVSSFGKDTYTRLMKRLDTYTR*MKRLRT
Trigger: TGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTC...CAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TATGGCTACAAACAGCATATGATCCTAAGAAATCATGCATCTTCTGGCTGGGCGGTCTTGTCTCCTCATTaGGTAAAGACACATATACCC +
Preference number: 5 (lower is better)
Translates to: YGYKQHMILRNHASSGWAVLSPH*VKTHIP
Trigger: GGGTATATGTGTCTTTACCAAATGAGGAGACAAGAC...CGCCCAGCCAGAAGATGCATGATTTCTTAGGATCATATGCTGTTTGTAGCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAAGTATCTCCAAAGTCCTaGTTCCAACGTATGTACGCT +
Preference number: 5 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKVSPKS*FQRMYA
Trigger: AGCGTACATACGTTGGAACAAGGACTTTGGAGATAC...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp CTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAGTATCTCCAAAGTCCTaGTTCCAACGTATGTACGCT +
Preference number: 5 (lower is better)
Translates to: LVSSFGKDTYTRLMKRLRVSPKS*FQRMYA
Trigger: AGCGTACATACGTTGGAACAAGGACTTTGGAGATAC...TCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646082.1
CDS-3UTR CAA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTAGTATTTCCCTTCTCTaGCACTGGAAACATTTTCAC +
Preference number: 5 (lower is better)
Translates to: LCSNLVSIGITVTIKARPSISLL*HWKHFH
Trigger: GTGAAAATGTTTCCAGTGCAAGAGAAGGGAAATACT...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS TCA 90 bp ATTGCGGCATGCCAAGTTAGTACTGTCATTATAGACGTCCGTTTGTaGCTTGGAAAATGGCAAAACTGGTTGCATCTAGAAGTTGTAAGC +
Preference number: 5 (lower is better)
Translates to: IAACQVSTVIIDVRL*LGKWQNWLHLEVVS
Trigger: GCTTACAACTTCTAGATGCAACCAGTTTTGCCATTTTCCAAGTCACAAACGGACGTCTATAATGACAGTACTAACTTGGCATGCCGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000647007.1
CDS TCA 90 bp ATTGCGGCATGCCAAGTTAGTACTGTCATTATAGACGTCCGTTTGTaGCTTGGAAAATGGCAAAACTGGTTGCATCTTCTCTTTCTCATC +
Preference number: 5 (lower is better)
Translates to: IAACQVSTVIIDVRL*LGKWQNWLHLLFLI
Trigger: GATGAGAAAGAGAAGATGCAACCAGTTTTGCCATTTTCCAAGTCACAAACGGACGTCTATAATGACAGTACTAACTTGGCATGCCGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645671.1
CDS-3UTR CAA 90 bp AAACTTGCAGCACTTATATTAAAGAAGGTTGCATTCGATTCTGCAGCTACTGCTATACCATTCCACAGCTaGCTCCTTCTGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: KLAALILKKVAFDSAATAIPFHS*LLLSCF
Trigger: AAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTAT...AGCAGTAGCTGCAGAATCGAATGCAACCTTCTTTAATATAAGTGCTGCAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646082.1
CDS-3UTR CAA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGTCATCATTTTAGCTaGAAGGCGTCTAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: VLLCSNLVSIGITVTIKASHHFS*KASSSF
Trigger: GAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACT...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAGTTGTAAGCGGTCCTaGGCCATAACCAAATTAGTC +
Preference number: 5 (lower is better)
Translates to: NQVLLCSNLVSIGITVTISCKRS*AITKLV
Trigger: GACTAATTTGGTTATGGCCAAGGACCGCTTACAACT...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTAGTTGTAAGCGGTCCTaGGCCATAACCAAATTAGTC +
Preference number: 5 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITSCKRS*AITKLV
Trigger: GACTAATTTGGTTATGGCCAAGGACCGCTTACAACT...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TCCGTTTGTGACTTGGAAAATGGCAAAACTGGTTGCATCTTCTCTAGAAGTTGTAGTTGTAAGCGGTCCTaGGCCATAACCAAATTAGTC +
Preference number: 5 (lower is better)
Translates to: SVCDLENGKTGCIFSRSCSCKRS*AITKLV
Trigger: GACTAATTTGGTTATGGCCAAGGACCGCTTACAACT...ACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATTTTCCAAGTCACAAACGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR CAA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACAGACTGGAGATGTCCATaGCGGCATGCCAAGTTAGTA +
Preference number: 5 (lower is better)
Translates to: CLLPFTVPGILSSATQYTDWRCP*RHAKLV
Trigger: TACTAACTTGGCATGCCGCAATGGACATCTCCAGTC...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCGACTGGAGATGTCCATaGCGGCATGCCAAGTTAGTA +
Preference number: 5 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSDWRCP*RHAKLV
Trigger: TACTAACTTGGCATGCCGCAATGGACATCTCCAGTC...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTTGTTTTGCCAAGTCTaGACCAGCTATATCATCAAA +
Preference number: 5 (lower is better)
Translates to: LCSNLVSIGITVTIKARPLFCQV*TSYIIK
Trigger: TTTGATGATATAGCTGGTCAAGACTTGGCAAAACAA...AGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAACAGCCAATTTCTTGCAATGCTaGTTTTGCCAAGTCTTGACC +
Preference number: 5 (lower is better)
Translates to: SSFGKDTYTRLMKRLRTANFLQC*FCQVLT
Trigger: GGTCAAGACTTGGCAAAACAAGCATTGCAAGAAATT...GGCTGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TCAGTTTTTAGGCGTCTACTAGCATCGTGCTCCCCTTCTCTTCTTTCACACAAAAATTTCTTGCAATGCTaGTTTTGCCAAGTCTTGACC +
Preference number: 5 (lower is better)
Translates to: SVFRRLLASCSPSLLSHKNFLQC*FCQVLT
Trigger: GGTCAAGACTTGGCAAAACAAGCATTGCAAGAAATT...TTTGTGTGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACGCCTAAAAACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAACAGCCTCACTTCTCCCACGTATTTaGAAGTTAAACTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: SFGKDTYTRLMKRLRTASLLPRI*KLNLQH
Trigger: GTGCTGCAAGTTTAACTTCAAAATACGTGGGAGAAG...TGAGGCTGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TTTCTCATCTCACTGGCAGACATATTCTTCACCTGTTCTGGTTTTAGTTCTCGGCTTCTCCCACGTATTTaGAAGTTAAACTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: FLISLADIFFTCSGFSSRLLPRI*KLNLQH
Trigger: GTGCTGCAAGTTTAACTTCAAAATACGTGGGAGAAG...CCGAGAACTAAAACCAGAACAGGTGAAGAATATGTCTGCCAGTGAGATGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAACAGCCAAAAATTATAGAAGGTaGAAGTTCTCGAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: SSFGKDTYTRLMKRLRTAKNYRR*KFSSHS
Trigger: GCTGTGGCTCGAGAACTTCAACCTTCTATAATTTTT...GGCTGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGACACATATACCCGTTaGATGAAACGCCTGAGAACA +
Preference number: 5 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITDTYTR*MKRLRT
Trigger: TGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTC...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ACCCATTACAAGTACTCTGTCATCTCCAGCAGACTGTACACCATCAAATTCTATGACACATATACCCGTTaGATGAAACGCCTGAGAACA +
Preference number: 5 (lower is better)
Translates to: THYKYSVISSRLYTIKFYDTYTR*MKRLRT
Trigger: TGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTC...ATAGAATTTGATGGTGTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp CTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAGTCTTGTCTCCTCATTaGGTAAAGACACATATACCC +
Preference number: 5 (lower is better)
Translates to: LVSSFGKDTYTRLMKRLRVLSPH*VKTHIP
Trigger: GGGTATATGTGTCTTTACCAAATGAGGAGACAAGAC...TCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp CAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTGAGGTCTTGTCTCCTCATTaGGTAAAGACACATATACCC +
Preference number: 5 (lower is better)
Translates to: QWYLQSPCSNVCTLLKFEVLSPH*VKTHIP
Trigger: GGGTATATGTGTCTTTACCAAATGAGGAGACAAGAC...CTCAAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR CAA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCCCAGTGCTGCATCTTTaGCCAAAGCTGTTAGGTCAC +
Preference number: 5 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSPVLHL*PKLLGH
Trigger: GTGACCTAACAGCTTTGGCAAAAGATGCAGCACTGG...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTCCAGTGCTGCATCTTTaGCCAAAGCTGTTAGGTCAC +
Preference number: 5 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSIPVLHL*PKLLGH
Trigger: GTGACCTAACAGCTTTGGCAAAAGATGCAGCACTGG...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGGTATCTCCAAAGTCCTaGTTCCAACGTATGTACGCT +
Preference number: 5 (lower is better)
Translates to: MFETLKGYYPSPNICIALVSPKS*FQRMYA
Trigger: AGCGTACATACGTTGGAACAAGGACTTTGGAGATAC...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp TCAGTTTTTAGGCGTCTACTAGCATCGTGCTCCCCTTCTCTTCTTTCACACAAAAAATGGCAAAACTGGTaGCATCTAGAAGTTGTAAGC +
Preference number: 5 (lower is better)
Translates to: SVFRRLLASCSPSLLSHKKWQNW*HLEVVS
Trigger: GCTTACAACTTCTAGATGCAACCAGTTTTGCCATTT...TTTGTGTGAAAGAAGAGAAGGGGAGCACGATGCTAGTAGACGCCTAAAAACTGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000643334.1
CDS CCA 90 bp CATAGAATTGTTGCTGATGACAAACTTAAATTGAGATCATTAGGGTaGGTCCTAATCCACAGGGGAAATTTGGACATGGTGACAGACACA +
Preference number: 5 (lower is better)
Translates to: HRIVADDKLKLRSLG*VLIHRGNLDMVTDT
Trigger: TGTGTCTGTCACCATGTCCAAATTTCCCCTGTGGATTAGGACCCACCCTAATGATCTCAATTTAAGTTTGTCATCAGCAACAATTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645550.1
CDS-3UTR CAA 90 bp TTACTGTACATTTTGGGAGAACAAAAGGCAGATCAACAGACTAGAACTAGAACTATACCATTCCACAGCTaGCTCCTTCTGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LLYILGEQKADQQTRTRTIPFHS*LLLSCF
Trigger: AAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTAT...AGTTCTAGTTCTAGTCTGTTGATCTGCCTTTTGTTCTCCCAAAATGTACAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCATACCATTCCACAGCTaGCTCCTTCTGTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSIPFHS*LLLSCF
Trigger: AAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTAT...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGTTCACACTGTTCACCTaGTCCTGTAACTATAACAGC +
Preference number: 5 (lower is better)
Translates to: MFETLKGYYPSPNICIALFTLFT*SCNYNS
Trigger: GCTGTTATAGTTACAGGACAAGGTGAACAGTGTGAA...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp CCGTTTGTGACTTGGAAAATGGCAAAACTGGTTGCATCTTCTCTAGAAGTTGTAAGTCATCATTTTAGCTaGAAGGCGTCTAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: PFVTWKMAKLVASSLEVVSHHFS*KASSSF
Trigger: GAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACT...TACAACTTCTAGAGAAGATGCAACCAGTTTTGCCATTTTCCAAGTCACAAACGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS-3UTR CAA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATAGTTGTAAGCGGTCCTaGGCCATAACCAAATTAGTC +
Preference number: 5 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNSCKRS*AITKLV
Trigger: GACTAATTTGGTTATGGCCAAGGACCGCTTACAACT...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAAGTTGTAAGCGGTCCTaGGCCATAACCAAATTAGTC +
Preference number: 5 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGSCKRS*AITKLV
Trigger: GACTAATTTGGTTATGGCCAAGGACCGCTTACAACT...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCACCTGTTCTGGTACGTCCGTTTGTGACTaGGAAAATGGCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: DNRIFLISLADIFFTCSGTSVCD*ENGKTG
Trigger: ACCAGTTTTGCCATTTTCCAAGTCACAAACGGACGT...ACCAGAACAGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643334.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR CAA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAATAAGGTTAGCAAGGTaGCTGTCCACATTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: VLLCSNLVSIGITVTIKAIRLAR*LSTFLK
Trigger: TTTTAGGAATGTGGACAGCAACCTTGCTAACCTTAT...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAAATAAGGTTAGCAAGGTaGCTGTCCACATTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKIRLAR*LSTFLK
Trigger: TTTTAGGAATGTGGACAGCAACCTTGCTAACCTTAT...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAACAGCCTCAATAAGGTTAGCAAGGTaGCTGTCCACATTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: SFGKDTYTRLMKRLRTASIRLAR*LSTFLK
Trigger: TTTTAGGAATGTGGACAGCAACCTTGCTAACCTTAT...TGAGGCTGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAAAATTTCTTGCAATGCTaGTTTTGCCAAGTCTTGACC +
Preference number: 5 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKNFLQC*FCQVLT
Trigger: GGTCAAGACTTGGCAAAACAAGCATTGCAAGAAATT...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCCTTCTCCCACGTATTTaGAAGTTAAACTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: NQVLLCSNLVSIGITVTILLPRI*KLNLQH
Trigger: GTGCTGCAAGTTTAACTTCAAAATACGTGGGAGAAG...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp CTTAAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGCTTCTCCCACGTATTTaGAAGTTAAACTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: LKQWYLQSPCSNVCTLLKLLPRI*KLNLQH
Trigger: GTGCTGCAAGTTTAACTTCAAAATACGTGGGAGAAG...CTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR CAA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTCTTCTCCCACGTATTTaGAAGTTAAACTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITLLPRI*KLNLQH
Trigger: GTGCTGCAAGTTTAACTTCAAAATACGTGGGAGAAG...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGAAAAATTATAGAAGGTaGAAGTTCTCGAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGKNYRR*KFSSHS
Trigger: GCTGTGGCTCGAGAACTTCAACCTTCTATAATTTTT...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATGACACATATACCCGTTaGATGAAACGCCTGAGAACA +
Preference number: 5 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNDTYTR*MKRLRT
Trigger: TGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTC...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAGACACATATACCCGTTaGATGAAACGCCTGAGAACA +
Preference number: 5 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGDTYTR*MKRLRT
Trigger: TGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTC...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCGTCTTGTCTCCTCATTaGGTAAAGACACATATACCC +
Preference number: 5 (lower is better)
Translates to: NQVLLCSNLVSIGITVTIVLSPH*VKTHIP
Trigger: GGGTATATGTGTCTTTACCAAATGAGGAGACAAGAC...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGCCAGTGCTGCATCTTTaGCCAAAGCTGTTAGGTCAC +
Preference number: 5 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVPVLHL*PKLLGH
Trigger: GTGACCTAACAGCTTTGGCAAAAGATGCAGCACTGG...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGGACCAGAATCAGGTTTaGTTGTGCTCTAACTTAGTG +
Preference number: 5 (lower is better)
Translates to: MFETLKGYYPSPNICIALDQNQV*LCSNLV
Trigger: CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTC...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAAAGTATTTCCCTTCTCTaGCACTGGAAACATTTTCAC +
Preference number: 5 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKSISLL*HWKHFH
Trigger: GTGAAAATGTTTCCAGTGCAAGAGAAGGGAAATACT...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAACAGTTTATTTGTCCTATTaGTTTTCGGAGTACCCTGAC +
Preference number: 5 (lower is better)
Translates to: VSSFGKDTYTRLMKRLRTVYLSY*FSEYPD
Trigger: GTCAGGGTACTCCGAAAACAAATAGGACAAATAAAC...TGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646082.1
CDS-3UTR CAA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATAGTCATCATTTTAGCTaGAAGGCGTCTAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNSHHFS*KASSSF
Trigger: GAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACT...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAAGTCATCATTTTAGCTaGAAGGCGTCTAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGSHHFS*KASSSF
Trigger: GAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACT...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACAAGTTGTAAGCGGTCCTaGGCCATAACCAAATTAGTC +
Preference number: 5 (lower is better)
Translates to: CLLPFTVPGILSSATQYTSCKRS*AITKLV
Trigger: GACTAATTTGGTTATGGCCAAGGACCGCTTACAACT...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TCCATTGTCCACAATTTCATTCATTATAAGGTTAGCAAGGTTGCTGTCCACATTAGTTGTAAGCGGTCCTaGGCCATAACCAAATTAGTC +
Preference number: 5 (lower is better)
Translates to: SIVHNFIHYKVSKVAVHISCKRS*AITKLV
Trigger: GACTAATTTGGTTATGGCCAAGGACCGCTTACAACT...AATGTGGACAGCAACCTTGCTAACCTTATAATGAATGAAATTGTGGACAATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTACGTCCGTTTGTGACTaGGAAAATGGCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSITSVCD*ENGKTG
Trigger: ACCAGTTTTGCCATTTTCCAAGTCACAAACGGACGT...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTATAAGGTTAGCAAGGTaGCTGTCCACATTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITIRLAR*LSTFLK
Trigger: TTTTAGGAATGTGGACAGCAACCTTGCTAACCTTAT...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp CTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCAAGGCCTTAAACAACAAATTGTTTTGCCAAGTCTaGACCAGCTATATCATCAAA +
Preference number: 5 (lower is better)
Translates to: LSVHWDNCDHQGKALNNKLFCQV*TSYIIK
Trigger: TTTGATGATATAGCTGGTCAAGACTTGGCAAAACAA...TTTGTTGTTTAAGGCCTTGCCTTGATGGTCACAGTTATCCCAATGGACACTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TCATTTGGTAAAGACACATATACCCGTTTGATGAAACGCCTGAGAACAGCCTCATTGTTTTGCCAAGTCTaGACCAGCTATATCATCAAA +
Preference number: 5 (lower is better)
Translates to: SFGKDTYTRLMKRLRTASLFCQV*TSYIIK
Trigger: TTTGATGATATAGCTGGTCAAGACTTGGCAAAACAA...TGAGGCTGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTCTTTACCAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp GTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAGGCATTGTTTTGCCAAGTCTaGACCAGCTATATCATCAAA +
Preference number: 5 (lower is better)
Translates to: VLLCSNLVSIGITVTIKALFCQV*TSYIIK
Trigger: TTTGATGATATAGCTGGTCAAGACTTGGCAAAACAA...TGCCTTGATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645671.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTAATTTCTTGCAATGCTaGTTTTGCCAAGTCTTGACC +
Preference number: 5 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITNFLQC*FCQVLT
Trigger: GGTCAAGACTTGGCAAAACAAGCATTGCAAGAAATT...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAATTTCTTGCAATGCTaGTTTTGCCAAGTCTTGACC +
Preference number: 5 (lower is better)
Translates to: NQVLLCSNLVSIGITVTINFLQC*FCQVLT
Trigger: GGTCAAGACTTGGCAAAACAAGCATTGCAAGAAATT...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGTGACCATCAAAAATTATAGAAGGTaGAAGTTCTCGAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: NQVLLCSNLVSIGITVTIKNYRR*KFSSHS
Trigger: GCTGTGGCTCGAGAACTTCAACCTTCTATAATTTTT...GATGGTCACAGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp CTTAAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGAAAAATTATAGAAGGTaGAAGTTCTCGAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: LKQWYLQSPCSNVCTLLKKNYRR*KFSSHS
Trigger: GCTGTGGCTCGAGAACTTCAACCTTCTATAATTTTT...CTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TCAGTGAAGTCAGATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCGACACATATACCCGTTaGATGAAACGCCTGAGAACA +
Preference number: 5 (lower is better)
Translates to: SVKSDNRIFLISLADIFFDTYTR*MKRLRT
Trigger: TGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTC...GAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCTGACTTCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643334.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACAGACACATATACCCGTTaGATGAAACGCCTGAGAACA +
Preference number: 5 (lower is better)
Translates to: CLLPFTVPGILSSATQYTDTYTR*MKRLRT
Trigger: TGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTC...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AAACAGTGGTATCTCCAAAGTCCTTGTTCCAACGTATGTACGCTTCTAAAGTTTGTCTTGTCTCCTCATTaGGTAAAGACACATATACCC +
Preference number: 5 (lower is better)
Translates to: KQWYLQSPCSNVCTLLKFVLSPH*VKTHIP
Trigger: GGGTATATGTGTCTTTACCAAATGAGGAGACAAGAC...AAACTTTAGAAGCGTACATACGTTGGAACAAGGACTTTGGAGATACCACTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642751.1
ENST00000644408.1
ENST00000645671.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACAGTATCTCCAAAGTCCTaGTTCCAACGTATGTACGCT +
Preference number: 5 (lower is better)
Translates to: CLLPFTVPGILSSATQYTVSPKS*FQRMYA
Trigger: AGCGTACATACGTTGGAACAAGGACTTTGGAGATAC...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCGTATCTCCAAAGTCCTaGTTCCAACGTATGTACGCT +
Preference number: 5 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSVSPKS*FQRMYA
Trigger: AGCGTACATACGTTGGAACAAGGACTTTGGAGATAC...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGTATCTCCAAAGTCCTaGTTCCAACGTATGTACGCT +
Preference number: 5 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLVSPKS*FQRMYA
Trigger: AGCGTACATACGTTGGAACAAGGACTTTGGAGATAC...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCGTATCTCCAAAGTCCTaGTTCCAACGTATGTACGCT +
Preference number: 5 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSVSPKS*FQRMYA
Trigger: AGCGTACATACGTTGGAACAAGGACTTTGGAGATAC...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGTATCTCCAAAGTCCTaGTTCCAACGTATGTACGCT +
Preference number: 5 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSIVSPKS*FQRMYA
Trigger: AGCGTACATACGTTGGAACAAGGACTTTGGAGATAC...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGGGTTCATCTTCAAGTTaGGTGCACAAATATGTAAGA +
Preference number: 5 (lower is better)
Translates to: GKEDQNQVLLCSNLVSIGGSSSS*VHKYVR
Trigger: TCTTACATATTTGTGCACCAAACTTGAAGATGAACC...CCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCACCTGTTCTGGTGACCAGAATCAGGTTTaGTTGTGCTCTAACTTAGTG +
Preference number: 5 (lower is better)
Translates to: DNRIFLISLADIFFTCSGDQNQV*LCSNLV
Trigger: CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTC...ACCAGAACAGGTGAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644408.1
CDS-3UTR CAA 90 bp TCTTGTGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATGACCAGAATCAGGTTTaGTTGTGCTCTAACTTAGTG +
Preference number: 5 (lower is better)
Translates to: SCVFYHSLFLEYFHLQHNDQNQV*LCSNLV
Trigger: CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTC...ATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACACAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTAGTATTTCCCTTCTCTaGCACTGGAAACATTTTCAC +
Preference number: 5 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITSISLL*HWKHFH
Trigger: GTGAAAATGTTTCCAGTGCAAGAGAAGGGAAATACT...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGAGTATTTCCCTTCTCTaGCACTGGAAACATTTTCAC +
Preference number: 5 (lower is better)
Translates to: MFETLKGYYPSPNICIALSISLL*HWKHFH
Trigger: GTGAAAATGTTTCCAGTGCAAGAGAAGGGAAATACT...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTTCACACTGTTCACCTaGTCCTGTAACTATAACAGC +
Preference number: 5 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSFTLFT*SCNYNS
Trigger: GCTGTTATAGTTACAGGACAAGGTGAACAGTGTGAA...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGTTCACACTGTTCACCTaGTCCTGTAACTATAACAGC +
Preference number: 5 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLFTLFT*SCNYNS
Trigger: GCTGTTATAGTTACAGGACAAGGTGAACAGTGTGAA...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCTTCACACTGTTCACCTaGTCCTGTAACTATAACAGC +
Preference number: 5 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSFTLFT*SCNYNS
Trigger: GCTGTTATAGTTACAGGACAAGGTGAACAGTGTGAA...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TCAGTGAAGTCAGATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCTTCACACTGTTCACCTaGTCCTGTAACTATAACAGC +
Preference number: 5 (lower is better)
Translates to: SVKSDNRIFLISLADIFFFTLFT*SCNYNS
Trigger: GCTGTTATAGTTACAGGACAAGGTGAACAGTGTGAA...GAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCTGACTTCACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643334.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TTACTGTACATTTTGGGAGAACAAAAGGCAGATCAACAGACTAGAACTAGAACTTTCACACTGTTCACCTaGTCCTGTAACTATAACAGC +
Preference number: 5 (lower is better)
Translates to: LLYILGEQKADQQTRTRTFTLFT*SCNYNS
Trigger: GCTGTTATAGTTACAGGACAAGGTGAACAGTGTGAA...AGTTCTAGTTCTAGTCTGTTGATCTGCCTTTTGTTCTCCCAAAATGTACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCAGTCATCATTTTAGCTaGAAGGCGTCTAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSSHHFS*KASSSF
Trigger: GAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACT...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TCAGTGAAGTCAGATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCAGTCATCATTTTAGCTaGAAGGCGTCTAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: SVKSDNRIFLISLADIFFSHHFS*KASSSF
Trigger: GAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACT...GAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCTGACTTCACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643334.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACAAGTCATCATTTTAGCTaGAAGGCGTCTAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: CLLPFTVPGILSSATQYTSHHFS*KASSSF
Trigger: GAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACT...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TTACTGTACATTTTGGGAGAACAAAAGGCAGATCAACAGACTAGAACTAGAACTAGTCATCATTTTAGCTaGAAGGCGTCTAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LLYILGEQKADQQTRTRTSHHFS*KASSSF
Trigger: GAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACT...AGTTCTAGTTCTAGTCTGTTGATCTGCCTTTTGTTCTCCCAAAATGTACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGAGTTGTAAGCGGTCCTaGGCCATAACCAAATTAGTC +
Preference number: 5 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVSCKRS*AITKLV
Trigger: GACTAATTTGGTTATGGCCAAGGACCGCTTACAACT...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCACGTCCGTTTGTGACTaGGAAAATGGCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFTSVCD*ENGKTG
Trigger: ACCAGTTTTGCCATTTTCCAAGTCACAAACGGACGT...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGACGTCCGTTTGTGACTaGGAAAATGGCAAAACTGGT +
Preference number: 5 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVTSVCD*ENGKTG
Trigger: ACCAGTTTTGCCATTTTCCAAGTCACAAACGGACGT...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642999.1
ENST00000644408.1
ENST00000647133.1
CDS-3UTR CAA 90 bp CAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGGAATAAGGTTAGCAAGGTaGCTGTCCACATTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: QKTNKQMFLCLLPFTVPGIRLAR*LSTFLK
Trigger: TTTTAGGAATGTGGACAGCAACCTTGCTAACCTTAT...TCCAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ATGTTTGAGACCTTAAAGGGATACTACCCATCACCTAACATATGCATAGCTCTGTTGTTTTGCCAAGTCTaGACCAGCTATATCATCAAA +
Preference number: 5 (lower is better)
Translates to: MFETLKGYYPSPNICIALLFCQV*TSYIIK
Trigger: TTTGATGATATAGCTGGTCAAGACTTGGCAAAACAA...CAGAGCTATGCATATGTTAGGTGATGGGTAGTATCCCTTTAAGGTCTCAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
CDS-3UTR CAA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCCTTCTCCCACGTATTTaGAAGTTAAACTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSLLPRI*KLNLQH
Trigger: GTGCTGCAAGTTTAACTTCAAAATACGTGGGAGAAG...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TCAGTGAAGTCAGATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCCTTCTCCCACGTATTTaGAAGTTAAACTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: SVKSDNRIFLISLADIFFLLPRI*KLNLQH
Trigger: GTGCTGCAAGTTTAACTTCAAAATACGTGGGAGAAG...GAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCTGACTTCACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643334.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TTACTGTACATTTTGGGAGAACAAAAGGCAGATCAACAGACTAGAACTAGAACTCTTCTCCCACGTATTTaGAAGTTAAACTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: LLYILGEQKADQQTRTRTLLPRI*KLNLQH
Trigger: GTGCTGCAAGTTTAACTTCAAAATACGTGGGAGAAG...AGTTCTAGTTCTAGTCTGTTGATCTGCCTTTTGTTCTCCCAAAATGTACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGGACACATATACCCGTTaGATGAAACGCCTGAGAACA +
Preference number: 5 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVDTYTR*MKRLRT
Trigger: TGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTC...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCGACACATATACCCGTTaGATGAAACGCCTGAGAACA +
Preference number: 5 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFDTYTR*MKRLRT
Trigger: TGTTCTCAGGCGTTTCATCAAACGGGTATATGTGTC...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGTCTTGTCTCCTCATTaGGTAAAGACACATATACCC +
Preference number: 5 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSIVLSPH*VKTHIP
Trigger: GGGTATATGTGTCTTTACCAAATGAGGAGACAAGAC...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCGTCTTGTCTCCTCATTaGGTAAAGACACATATACCC +
Preference number: 5 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSVLSPH*VKTHIP
Trigger: GGGTATATGTGTCTTTACCAAATGAGGAGACAAGAC...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCGTCTTGTCTCCTCATTaGGTAAAGACACATATACCC +
Preference number: 5 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSVLSPH*VKTHIP
Trigger: GGGTATATGTGTCTTTACCAAATGAGGAGACAAGAC...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGGTATCTCCAAAGTCCTaGTTCCAACGTATGTACGCT +
Preference number: 5 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVVSPKS*FQRMYA
Trigger: AGCGTACATACGTTGGAACAAGGACTTTGGAGATAC...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTGGGATAACTGGTTCATCTTCAAGTTaGGTGCACAAATATGTAAGA +
Preference number: 5 (lower is better)
Translates to: EDQNQVLLCSNLVSIGITGSSSS*VHKYVR
Trigger: TCTTACATATTTGTGCACCAAACTTGAAGATGAACC...AGTTATCCCAATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTCAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCC +
Preference number: 5 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSIQNQVL*CSNLVS
Trigger: GGACACTAAGTTAGAGCACAACAAAACCTGATTCTG...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGCAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCC +
Preference number: 5 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLQNQVL*CSNLVS
Trigger: GGACACTAAGTTAGAGCACAACAAAACCTGATTCTG...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACACAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCC +
Preference number: 5 (lower is better)
Translates to: CLLPFTVPGILSSATQYTQNQVL*CSNLVS
Trigger: GGACACTAAGTTAGAGCACAACAAAACCTGATTCTG...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TTACTGTACATTTTGGGAGAACAAAAGGCAGATCAACAGACTAGAACTAGAACTCAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCC +
Preference number: 5 (lower is better)
Translates to: LLYILGEQKADQQTRTRTQNQVL*CSNLVS
Trigger: GGACACTAAGTTAGAGCACAACAAAACCTGATTCTG...AGTTCTAGTTCTAGTCTGTTGATCTGCCTTTTGTTCTCCCAAAATGTACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315285.9
ENST00000642751.1
ENST00000642999.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCGACCAGAATCAGGTTTaGTTGTGCTCTAACTTAGTG +
Preference number: 5 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSDQNQV*LCSNLV
Trigger: CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTC...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGAGTCATCATTTTAGCTaGAAGGCGTCTAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVSHHFS*KASSSF
Trigger: GAAAGAGCTAGACGCCTTCAAGCTAAAATGATGACT...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTGATAAGGTTAGCAAGGTaGCTGTCCACATTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: IRRQTNKCSCVFYHSLFLIRLAR*LSTFLK
Trigger: TTTTAGGAATGTGGACAGCAACCTTGCTAACCTTAT...CAGGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATAAGGTTAGCAAGGTaGCTGTCCACATTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSIRLAR*LSTFLK
Trigger: TTTTAGGAATGTGGACAGCAACCTTGCTAACCTTAT...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACAAATTTCTTGCAATGCTaGTTTTGCCAAGTCTTGACC +
Preference number: 5 (lower is better)
Translates to: CLLPFTVPGILSSATQYTNFLQC*FCQVLT
Trigger: GGTCAAGACTTGGCAAAACAAGCATTGCAAGAAATT...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCATTAATTTCTTGCAATGCTaGTTTTGCCAAGTCTTGACC +
Preference number: 5 (lower is better)
Translates to: IGKEDQNQVLLCSNLVSINFLQC*FCQVLT
Trigger: GGTCAAGACTTGGCAAAACAAGCATTGCAAGAAATT...AATGGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGCTTCTCCCACGTATTTaGAAGTTAAACTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVLLPRI*KLNLQH
Trigger: GTGCTGCAAGTTTAACTTCAAAATACGTGGGAGAAG...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCAAAAATTATAGAAGGTaGAAGTTCTCGAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSKNYRR*KFSSHS
Trigger: GCTGTGGCTCGAGAACTTCAACCTTCTATAATTTTT...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TCAGTGAAGTCAGATAATCGAATATTTCTCATCTCACTGGCAGACATATTCTTCAAAAATTATAGAAGGTaGAAGTTCTCGAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: SVKSDNRIFLISLADIFFKNYRR*KFSSHS
Trigger: GCTGTGGCTCGAGAACTTCAACCTTCTATAATTTTT...GAAGAATATGTCTGCCAGTGAGATGAGAAATATTCGATTATCTGACTTCACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643334.1
ENST00000644408.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACAAAAAATTATAGAAGGTaGAAGTTCTCGAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: CLLPFTVPGILSSATQYTKNYRR*KFSSHS
Trigger: GCTGTGGCTCGAGAACTTCAACCTTCTATAATTTTT...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCGTCTTGTCTCCTCATTaGGTAAAGACACATATACCC +
Preference number: 5 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFVLSPH*VKTHIP
Trigger: GGGTATATGTGTCTTTACCAAATGAGGAGACAAGAC...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCC +
Preference number: 5 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFQNQVL*CSNLVS
Trigger: GGACACTAAGTTAGAGCACAACAAAACCTGATTCTG...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGCAGAATCAGGTTTTGTaGTGCTCTAACTTAGTGTCC +
Preference number: 5 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVQNQVL*CSNLVS
Trigger: GGACACTAAGTTAGAGCACAACAAAACCTGATTCTG...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGGACCAGAATCAGGTTTaGTTGTGCTCTAACTTAGTG +
Preference number: 5 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVDQNQV*LCSNLV
Trigger: CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTC...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGATAAGGTTAGCAAGGTaGCTGTCCACATTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVIRLAR*LSTFLK
Trigger: TTTTAGGAATGTGGACAGCAACCTTGCTAACCTTAT...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AAAAGTAGTCTTGTCTCCTCATTTGGTAAAGACACATATACCCGTTTGATGAAAATAAGGTTAGCAAGGTaGCTGTCCACATTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: KSSLVSSFGKDTYTRLMKIRLAR*LSTFLK
Trigger: TTTTAGGAATGTGGACAGCAACCTTGCTAACCTTAT...TTTCATCAAACGGGTATATGTGTCTTTACCAAATGAGGAGACAAGACTACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643327.1
ENST00000643334.1
ENST00000646082.1
CDS-3UTR CAA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACATTGTTTTGCCAAGTCTaGACCAGCTATATCATCAAA +
Preference number: 5 (lower is better)
Translates to: CLLPFTVPGILSSATQYTLFCQV*TSYIIK
Trigger: TTTGATGATATAGCTGGTCAAGACTTGGCAAAACAA...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCTTGTTTTGCCAAGTCTaGACCAGCTATATCATCAAA +
Preference number: 5 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSLFCQV*TSYIIK
Trigger: TTTGATGATATAGCTGGTCAAGACTTGGCAAAACAA...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp ACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCCTTGTTTTGCCAAGTCTaGACCAGCTATATCATCAAA +
Preference number: 5 (lower is better)
Translates to: TSEDKQTNVLVSSTIHCSLFCQV*TSYIIK
Trigger: TTTGATGATATAGCTGGTCAAGACTTGGCAAAACAA...GGAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp AACATCAGAAGACAAACAAACAAATGTTCTTGTGTCTTCTACCATTCACTGTTCAATTTCTTGCAATGCTaGTTTTGCCAAGTCTTGACC +
Preference number: 5 (lower is better)
Translates to: NIRRQTNKCSCVFYHSLFNFLQC*FCQVLT
Trigger: GGTCAAGACTTGGCAAAACAAGCATTGCAAGAAATT...GAACAGTGAATGGTAGAAGACACAAGAACATTTGTTTGTTTGTCTTCTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGTCCGGTTCATCTTCAAGTTaGGTGCACAAATATGTAAGA +
Preference number: 5 (lower is better)
Translates to: YIGKEDQNQVLLCSNLVSGSSSS*VHKYVR
Trigger: TCTTACATATTTGTGCACCAAACTTGAAGATGAACC...GGACACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp TGTCTTCTACCATTCACTGTTCCTGGAATACTTTCATCTGCAACACAATATACAGGTTCATCTTCAAGTTaGGTGCACAAATATGTAAGA +
Preference number: 5 (lower is better)
Translates to: CLLPFTVPGILSSATQYTGSSSS*VHKYVR
Trigger: TCTTACATATTTGTGCACCAAACTTGAAGATGAACC...TGTATATTGTGTTGCAGATGAAAGTATTCCAGGAACAGTGAATGGTAGAAGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS-3UTR CAA 90 bp GATTATATTGGTAAAGAAGACCAGAATCAGGTTTTGTTGTGCTCTAACTTAGTGGGTTCATCTTCAAGTTaGGTGCACAAATATGTAAGA +
Preference number: 5 (lower is better)
Translates to: DYIGKEDQNQVLLCSNLVGSSSS*VHKYVR
Trigger: TCTTACATATTTGTGCACCAAACTTGAAGATGAACC...CACTAAGTTAGAGCACAACAAAACCTGATTCTGGTCTTCTTTACCAATATAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646571.1
ENST00000647133.1
CDS CAA 90 bp GGGGCCGAGGCCGAGGCAGGTGCTGGCGCGGCCCCGGAGCTCCTCTaGGCTGCCATGAGGGCGCGGGAGAAGCGCTGGCAGAGCCACACG +
Preference number: 6 (lower is better)
Translates to: GAEAEAGAGAAPELL*AAMRAREKRWQSHT
Trigger: CGTGTGGCTCTGCCAGCGCTTCTCCCGCGCCCTCATGGCAGCCAAGAGGAGCTCCGGGGCCGCGCCAGCACCTGCCTCGGCCTCGGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000315285.9
ENST00000621856.2
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645400.1
ENST00000646082.1
ENST00000646571.1
CDS GCA 72 bp CAGCCACTGCTACGGCGGGGGCCACAGACCCCCGTGTaGCCGCCGGTCTCAGGAGCTCCGCACTGCCGCACG +
Preference number: 6 (lower is better)
Translates to: QPLLRRGPQTPV*PPVSGAPHCRT
Trigger: CGTGCGGCAGTGCGGAGCTCCTGAGACCGGCGGGCACACGGGGGTCTGTGGCCCCCGCCGTAGCAGTGGCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000646571.1
CDS GCA 72 bp GCAGACCGACGGGAACCAAGCGACGGCGGCAGCCACTaGTACGGCGGGGGCCACAGACCCCCGTGTGCCCGC +
Preference number: 6 (lower is better)
Translates to: ADRREPSDGGSH*YGGGHRPPCAR
Trigger: GCGGGCACACGGGGGTCTGTGGCCCCCGCCGTAGCAGTGGCTGCCGCCGTCGCTTGGTTCCCGTCGGTCTGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315285.9
ENST00000646571.1
CDS CAA 72 bp GCCGAGGCAGGTGCTGGCGCGGCCCCGGAGCTCCTCTaGGCTGCCATGAGGGCGCGGGAGAAGCGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: AEAGAGAAPELL*AAMRAREKRWQ
Trigger: CTGCCAGCGCTTCTCCCGCGCCCTCATGGCAGCCAAGAGGAGCTCCGGGGCCGCGCCAGCACCTGCCTCGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315285.9
ENST00000621856.2
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645400.1
ENST00000646082.1
ENST00000646571.1
CDS GCA 72 bp TCCTTCCTCGGCCAGGAGCACAACCCCTTCTCCTCCTaGAGTCGGTGGCTCGGGCCCCTCCCTTCCTGTCGC +
Preference number: 6 (lower is better)
Translates to: SFLGQEHNPFSS*SRWLGPLPSCR
Trigger: GCGACAGGAAGGGAGGGGCCCGAGCCACCGACTGCAGGAGGAGAAGGGGTTGTGCTCCTGGCCGAGGAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315285.9
CDS CCA 72 bp CTCCTCTTGGCTGCCATGAGGGCGCGGGAGAAGCGCTaGCAGAGCCACACGAAGAGGAGCCCCAGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: LLLAAMRAREKR*QSHTKRSPRWK
Trigger: CTTCCACCTGGGGCTCCTCTTCGTGTGGCTCTGCCAGCGCTTCTCCCGCGCCCTCATGGCAGCCAAGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315285.9
ENST00000621856.2
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645400.1
ENST00000646082.1
ENST00000646571.1
CDS CCA 72 bp CGCAGGGCAATGGAGATGTACTCGAAGGCCTGTTTGTaGAAGACTCGGACGCGCTCGGCCTCGCCGCCCGGC +
Preference number: 6 (lower is better)
Translates to: RRAMEMYSKACL*KTRTRSASPPG
Trigger: GCCGGGCGGCGAGGCCGAGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTACATCTCCATTGCCCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315285.9
ENST00000621856.2
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645400.1
ENST00000646082.1
ENST00000646571.1
CDS CAA 90 bp TCCTCATCGATGCGCAGGGCAATGGAGATGTACTCGAAGGCCTGTTaGTGGAAGACTCGGACGCGCTCGGCCTCGCCGCCCGGCACCGGC +
Preference number: 6 (lower is better)
Translates to: SSSMRRAMEMYSKAC*WKTRTRSASPPGTG
Trigger: GCCGGTGCCGGGCGGCGAGGCCGAGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGATGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315285.9
ENST00000621856.2
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645400.1
ENST00000646082.1
ENST00000646571.1
CDS GCA 72 bp CCTCGTCCACCCGGAGAATTCATTCACAGCTCTCACTaGCGCCGCCGCCATAACCCGCCTCCCGCAGACCGA +
Preference number: 6 (lower is better)
Translates to: PRPPGEFIHSSH*RRRHNPPPADR
Trigger: TCGGTCTGCGGGAGGCGGGTTATGGCGGCGGCGGCAGTGAGAGCTGTGAATGAATTCTCCGGGTGGACGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315285.9
ENST00000621856.2
ENST00000646571.1
CDS CAA 72 bp ATGCGCAGGGCAATGGAGATGTACTCGAAGGCCTGTTaGTGGAAGACTCGGACGCGCTCGGCCTCGCCGCCC +
Preference number: 6 (lower is better)
Translates to: MRRAMEMYSKAC*WKTRTRSASPP
Trigger: GGGCGGCGAGGCCGAGCGCGTCCGAGTCTTCCACAAACAGGCCTTCGAGTACATCTCCATTGCCCTGCGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315285.9
ENST00000621856.2
ENST00000642281.1
ENST00000642455.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000645400.1
ENST00000646082.1
ENST00000646571.1
CDS TCA 72 bp CTCCTTCTGTCCTGTGGTTCCAGCTACTCGGGAGACTaGGGCAAGAGAATCGCCTGCGTCTGGGAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: LLLSCGSSYSGD*GKRIACVWEAE
Trigger: CTCTGCCTCCCAGACGCAGGCGATTCTCTTGCCTCAGTCTCCCGAGTAGCTGGAACCACAGGACAGAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647007.1
CDS GCA 72 bp CTTGCTCCTTCTGTCCTGCTTTCTCATCCTCATCGATaGGCAGGGCAATGGAGATGTACTCGAAGGCCTGTT +
Preference number: 6 (lower is better)
Translates to: LAPSVLLSHPHR*AGQWRCTRRPV
Trigger: AACAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGATGAGGATGAGAAAGCAGGACAGAAGGAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646082.1
ENST00000646571.1
CDS GCA 72 bp CAGCTTGCTCCTTCTGTCCTTTCTCATCCTCATCGATaGGCAGGGCAATGGAGATGTACTCGAAGGCCTGTT +
Preference number: 6 (lower is better)
Translates to: QLAPSVLSHPHR*AGQWRCTRRPV
Trigger: AACAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGATGAGGATGAGAAAGGACAGAAGGAGCAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621856.2
ENST00000642455.1
CDS CCA 72 bp GTCCTGCTTTCTCATCCTCATCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCTGTTTGTGGAAGACTC +
Preference number: 6 (lower is better)
Translates to: VLLSHPHRCAGQ*RCTRRPVCGRL
Trigger: GAGTCTTCCACAAACAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGATGAGGATGAGAAAGCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646082.1
ENST00000646571.1
CDS CCA 72 bp TCTGTCCTTTCTCATCCTCATCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCTGTTTGTGGAAGACTC +
Preference number: 6 (lower is better)
Translates to: SVLSHPHRCAGQ*RCTRRPVCGRL
Trigger: GAGTCTTCCACAAACAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGATGAGGATGAGAAAGGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621856.2
ENST00000642455.1
CDS CCA 72 bp ATGTTACTTTCTCATCCTCATCGATGCGCAGGGCAATaGAGATGTACTCGAAGGCCTGTTTGTGGAAGACTC +
Preference number: 6 (lower is better)
Translates to: MLLSHPHRCAGQ*RCTRRPVCGRL
Trigger: GAGTCTTCCACAAACAGGCCTTCGAGTACATCTCCATTGCCCTGCGCATCGATGAGGATGAGAAAGTAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645400.1
CDS CAA 72 bp AGATCATTAGGGTGGGTCCTAATCCACAGGGGAAATTaGGACATGGTGACAGACACAGGGAGAATGCCACAT +
Preference number: 6 (lower is better)
Translates to: RSLGWVLIHRGN*DMVTDTGRMPH
Trigger: ATGTGGCATTCTCCCTGTGTCTGTCACCATGTCCAAATTTCCCCTGTGGATTAGGACCCACCCTAATGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645550.1
CDS GCA 72 bp AGTTCTTCAATACCTTTCTTATACCATTCCACAGCTTaGTCCTTCTGTCCTGTGGTTCCAGCTACTCGGGAG +
Preference number: 6 (lower is better)
Translates to: SSSIPFLYHSTA*SFCPVVPATRE
Trigger: CTCCCGAGTAGCTGGAACCACAGGACAGAAGGAGCAAGCTGTGGAATGGTATAAGAAAGGTATTGAAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647007.1
CDS CAA 72 bp CAGTTCTTCAATACCTTTCTTATACCATTCCACAGCTaGCTCCTTCTGTCCTGTGGTTCCAGCTACTCGGGA +
Preference number: 6 (lower is better)
Translates to: QFFNTFLIPFHS*LLLSCGSSYSG
Trigger: TCCCGAGTAGCTGGAACCACAGGACAGAAGGAGCAAGCTGTGGAATGGTATAAGAAAGGTATTGAAGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647007.1
CDS CAA 72 bp CAGTTCTTCAATACCTTTCTTATACCATTCCACAGCTaGCTCCTTCTGTCCTTTCTCATCCTCATCGATGCG +
Preference number: 6 (lower is better)
Translates to: QFFNTFLIPFHS*LLLSFLILIDA
Trigger: CGCATCGATGAGGATGAGAAAGGACAGAAGGAGCAAGCTGTGGAATGGTATAAGAAAGGTATTGAAGAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000621856.2
ENST00000642455.1
CDS CAA 72 bp TGCTTGCCCTACCCCAAAACTAGACTGAACACTTCTTaGAATAATACTATAGGGTCAGCAGAGGGTGAATGG +
Preference number: 6 (lower is better)
Translates to: CLPYPKTRLNTS*NNTIGSAEGEW
Trigger: CCATTCACCCTCTGCTGACCCTATAGTATTATTCAAAGAAGTGTTCAGTCTAGTTTTGGGGTAGGGCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645550.1
CDS GCA 72 bp AGTTCTTCAATACCTTTCTTATACCATTCCACAGCTTaGTCCTTCTGTCCTGCTTTCTCATCCTCATCGATG +
Preference number: 6 (lower is better)
Translates to: SSSIPFLYHSTA*SFCPAFSSSSM
Trigger: CATCGATGAGGATGAGAAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTATAAGAAAGGTATTGAAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315285.9
ENST00000642281.1
ENST00000642751.1
ENST00000642999.1
ENST00000644408.1
ENST00000644954.1
ENST00000646082.1
ENST00000646571.1
CDS CCA 72 bp GTTGCTGATGACAAACTTAAATTGAGATCATTAGGGTaGGTCCTAATCCACAGGGGAAATTTGGACATGGTG +
Preference number: 6 (lower is better)
Translates to: VADDKLKLRSLG*VLIHRGNLDMV
Trigger: CACCATGTCCAAATTTCCCCTGTGGATTAGGACCCACCCTAATGATCTCAATTTAAGTTTGTCATCAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645550.1
CDS CAA 90 bp CTTAAATTGAGATCATTAGGGTGGGTCCTAATCCACAGGGGAAATTaGGACATGGTGACAGACACAGGGAGAATGCCACATAAAGATAAA +
Preference number: 6 (lower is better)
Translates to: LKLRSLGWVLIHRGN*DMVTDTGRMPHKDK
Trigger: TTTATCTTTATGTGGCATTCTCCCTGTGTCTGTCACCATGTCCAAATTTCCCCTGTGGATTAGGACCCACCCTAATGATCTCAATTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645550.1
CDS CCA 72 bp CTCAGTTTATGCCATCAGATCTGTGTTCCTATCTGGTaGCTCCTTGAGATAAAATCCACTTTACTTGAAGCT +
Preference number: 6 (lower is better)
Translates to: LSLCHQICVPIW*LLEIKSTLLEA
Trigger: AGCTTCAAGTAAAGTGGATTTTATCTCAAGGAGCCACCAGATAGGAACACAGATCTGATGGCATAAACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645550.1
CDS TCA 72 bp TGCCAAGTTAGTACTGTCATTATAGACGTCCGTTTGTaGCTTGGAAAATGGCAAAACTGGTTGCATCTAGAA +
Preference number: 6 (lower is better)
Translates to: CQVSTVIIDVRL*LGKWQNWLHLE
Trigger: TTCTAGATGCAACCAGTTTTGCCATTTTCCAAGTCACAAACGGACGTCTATAATGACAGTACTAACTTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643334.1
ENST00000647007.1
CDS CAA 72 bp AGACAAACATCTAAGGAAAAGTTACTCTTTCCCTCTTaGTTTCTTCCATCCAGGAGGACTATGCAGAGGAAA +
Preference number: 6 (lower is better)
Translates to: RQTSKEKLLFPS*FLPSRRTMQRK
Trigger: TTTCCTCTGCATAGTCCTCCTGGATGGAAGAAACAAAGAGGGAAAGAGTAACTTTTCCTTAGATGTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645159.1
CDS CAA 72 bp TTTGGACATAGAATTGTTGCTGATGACAAACTTAAATaGAGATCATTAGGGTGGGTCCTAATCCACAGGGGA +
Preference number: 6 (lower is better)
Translates to: FGHRIVADDKLK*RSLGWVLIHRG
Trigger: TCCCCTGTGGATTAGGACCCACCCTAATGATCTCAATTTAAGTTTGTCATCAGCAACAATTCTATGTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645550.1
CDS CCA 72 bp ATACTCAGTTTATGCCATCAGATCTGTGTTCCTATCTaGTGGCTCCTTGAGATAAAATCCACTTTACTTGAA +
Preference number: 6 (lower is better)
Translates to: ILSLCHQICVPI*WLLEIKSTLLE
Trigger: TTCAAGTAAAGTGGATTTTATCTCAAGGAGCCACCAGATAGGAACACAGATCTGATGGCATAAACTGAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645550.1
CDS CCA 72 bp CTGGTTTTAGTTCTAGCAAGTTGTGCTAGTTCTTTTTaGGTCAATGGACTTCCTTGTTTACATAACAGATTT +
Preference number: 6 (lower is better)
Translates to: LVLVLASCASSF*VNGLPCLHNRF
Trigger: AAATCTGTTATGTAAACAAGGAAGTCCATTGACCCAAAAAGAACTAGCACAACTTGCTAGAACTAAAACCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642751.1
ENST00000645671.1