Pregenerated sensors for SPANXN4 (Homo sapiens)

Ensembl gene IDs: ENSG00000189326

Ensembl transcript IDs: ENST00000370504.3, ENST00000446864.1

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	CCATCCTGTGGAGATCCTGCAGATATGTCTAGGTCTCCTTTCTCTTaGATTGGATCAGTGGAGCTCTCTGTAGGCTGGTTATTCTCCAGT	+
Preference number: 6 (lower is better) Translates to: PSCGDPADMSRSPFS*IGSVELSVGWLFSS Trigger: ACTGGAGAATAACCAGCCTACAGAGAGCTCCACTGATCCAATCAAAGAGAAAGGAGACCTAGACATATCTGCAGGATCTCCACAGGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370504.3 ENST00000446864.1
CDS CAA 72 bp	GGAGATCCTGCAGATATGTCTAGGTCTCCTTTCTCTTaGATTGGATCAGTGGAGCTCTCTGTAGGCTGGTTA	+
Preference number: 6 (lower is better) Translates to: GDPADMSRSPFS*IGSVELSVGWL Trigger: TAACCAGCCTACAGAGAGCTCCACTGATCCAATCAAAGAGAAAGGAGACCTAGACATATCTGCAGGATCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370504.3 ENST00000446864.1

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu