Pregenerated sensors for SPAG4 (Homo sapiens)
Ensembl gene IDs: ENSG00000061656Ensembl transcript IDs: ENST00000374273.8, ENST00000430878.1, ENST00000454819.1, ENST00000462896.1, ENST00000463973.5, ENST00000468248.5, ENST00000498203.1, ENST00000679710.1
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGGCCGAGCCCGGGCGGGAGCTTCGCCGCATCCTGACCCCCTGCTaGCTAGTCACTGACGCTAAAGCCGCCGCTGCGGTCGCCAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: EAEPGRELRRILTPC*LVTDAKAAAAVAKA Trigger: GGCCTTGGCGACCGCAGCGGCGGCTTTAGCGTCAGTGACTAGGCAGCAGGGGGTCAGGATGCGGCGAAGCTCCCGCCCGGGCTCGGCCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000374273.8 ENST00000679710.1 |
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| CDS GCA 90 bp | GACTACTGGAGACCCAGTCGGTTCCGAGGCCCCGCCCCTCACGGTTaGCGCGCCACAGGCTGTCTGCCAGTTGTGGCTCCGAGGCGCTGG | + |
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Preference number: 5 (lower is better) Translates to: DYWRPSRFRGPAPHG*RATGCLPVVAPRRW Trigger: CCAGCGCCTCGGAGCCACAACTGGCAGACAGCCTGTGGCGCGGCAACCGTGAGGGGCGGGGCCTCGGAACCGACTGGGTCTCCAGTAGTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374273.8 |
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| CDS GCA 90 bp | GGGGCGCTGTTGGCTCCTCCGGTGTGCTCCACGCTGGGCGGTGGATaGTGCAGAGTGATGTCGCTCAGCTGCACTCGGCCCGGCAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: GALLAPPVCSTLGGG*CRVMSLSCTRPGSW Trigger: CCAACTGCCGGGCCGAGTGCAGCTGAGCGACATCACTCTGCAGCATCCACCGCCCAGCGTGGAGCACACCGGAGGAGCCAACAGCGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000468248.5 ENST00000498203.1 ENST00000679710.1 |
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| CDS GCA 90 bp | CTGCCAGTTGTGGCTCCGAGGCGCTGGCTTCTGCTGAGAGCTTCCTaGCCATGTGGTTCCTCCGGGCACTCCCGCGCTCAAGGCGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: LPVVAPRRWLLLRAS*PCGSSGHSRAQGGL Trigger: GAGCCCGCCTTGAGCGCGGGAGTGCCCGGAGGAACCACATGGGCAGGAAGCTCTCAGCAGAAGCCAGCGCCTCGGAGCCACAACTGGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374273.8 ENST00000679710.1 |
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| CDS TCA 90 bp | CCACAGGCTGTCTGCCAGTTGTGGCTCCGAGGCGCTGGCTTCTGCTaGGAGCTTCCTGCCCATGTGGTTCCTCCGGGCACTCCCGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: PQAVCQLWLRGAGFC*ELPAHVVPPGTPAL Trigger: GAGCGCGGGAGTGCCCGGAGGAACCACATGGGCAGGAAGCTCTCAGCAGAAGCCAGCGCCTCGGAGCCACAACTGGCAGACAGCCTGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374273.8 ENST00000679710.1 |
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| CDS GCA 90 bp | GCGCTGTTGGCTCCTCCGGTGTGCTCCACGCTGGGCGGTGGATGCTaGAGAGTGATGTCGCTCAGCTGCACTCGGCCCGGCAGTTGGATC | + |
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Preference number: 5 (lower is better) Translates to: ALLAPPVCSTLGGGC*RVMSLSCTRPGSWI Trigger: GATCCAACTGCCGGGCCGAGTGCAGCTGAGCGACATCACTCTGCAGCATCCACCGCCCAGCGTGGAGCACACCGGAGGAGCCAACAGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000468248.5 ENST00000498203.1 ENST00000679710.1 |
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| CDS CCA 90 bp | GGTTGCCGCGCCACAGGCTGTCTGCCAGTTGTGGCTCCGAGGCGCTaGCTTCTGCTGAGAGCTTCCTGCCCATGTGGTTCCTCCGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: GCRATGCLPVVAPRR*LLLRASCPCGSSGH Trigger: GTGCCCGGAGGAACCACATGGGCAGGAAGCTCTCAGCAGAAGCCAGCGCCTCGGAGCCACAACTGGCAGACAGCCTGTGGCGCGGCAACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374273.8 ENST00000679710.1 |
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| CDS TCA 90 bp | TGGCTCCTCCGGTGTGCTCCACGCTGGGCGGTGGATGCTGCAGAGTaGTGTCGCTCAGCTGCACTCGGCCCGGCAGTTGGATCACCACCT | + |
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Preference number: 5 (lower is better) Translates to: WLLRCAPRWAVDAAE*CRSAALGPAVGSPP Trigger: AGGTGGTGATCCAACTGCCGGGCCGAGTGCAGCTGAGCGACATCACTCTGCAGCATCCACCGCCCAGCGTGGAGCACACCGGAGGAGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000468248.5 ENST00000498203.1 ENST00000679710.1 |
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| CDS GCA 90 bp | TGCTCCACGCTGGGCGGTGGATGCTGCAGAGTGATGTCGCTCAGCTaGACTCGGCCCGGCAGTTGGATCACCACCTGGCCTTGGTCGCCT | + |
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Preference number: 5 (lower is better) Translates to: CSTLGGGCCRVMSLS*TRPGSWITTWPWSP Trigger: AGGCGACCAAGGCCAGGTGGTGATCCAACTGCCGGGCCGAGTGCAGCTGAGCGACATCACTCTGCAGCATCCACCGCCCAGCGTGGAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000468248.5 ENST00000498203.1 ENST00000679710.1 |
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| CDS GCA 90 bp | AAGGTCGAGCGGCTCCTCAGAGACTACTGGAGACCCAGTCGGTTCTaGGGGAACCCAAGGGCTCCACTGGGGCCTTGCGGACCACAGACC | + |
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Preference number: 5 (lower is better) Translates to: KVERLLRDYWRPSRF*GNPRAPLGPCGPQT Trigger: GGTCTGTGGTCCGCAAGGCCCCAGTGGAGCCCTTGGGTTCCCGCAGAACCGACTGGGTCTCCAGTAGTCTCTGAGGAGCCGCTCGACCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000454819.1 ENST00000462896.1 ENST00000463973.5 ENST00000468248.5 |
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| CDS GCA 90 bp | GTGGACACCTCCTTGTGGAGTTTATCCAGCTCGGCCTGGAGCTGCTaGAGCTGCTGCCCCTGGGAGCGCACGCGCTCGTGGTACTCACTG | + |
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Preference number: 5 (lower is better) Translates to: VDTSLWSLSSSAWSC*SCCPWERTRSWYSL Trigger: CAGTGAGTACCACGAGCGCGTGCGCTCCCAGGGGCAGCAGCTGCAGCAGCTCCAGGCCGAGCTGGATAAACTCCACAAGGAGGTGTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000463973.5 ENST00000468248.5 |
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| CDS CCA 90 bp | CAGATCCAGGGTCGGGAGAAGGTCGAGCGGCTCCTCAGAGACTACTaGAGACCCAGTCGGTTCTGCGGGAACCCAAGGGCTCCACTGGGG | + |
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Preference number: 5 (lower is better) Translates to: QIQGREKVERLLRDY*RPSRFCGNPRAPLG Trigger: CCCCAGTGGAGCCCTTGGGTTCCCGCAGAACCGACTGGGTCTCCAGTAGTCTCTGAGGAGCCGCTCGACCTTCTCCCGACCCTGGATCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000454819.1 ENST00000462896.1 ENST00000463973.5 ENST00000468248.5 |
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| CDS CCA 90 bp | AGTCTCAGGACCCTGGGAGCAGGGATCCATCAGGGGTTTCCAAGGTaGGCCGGGGCTCACCTCGCTGTTGGCTGCCCGAACAGTGGACAC | + |
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Preference number: 5 (lower is better) Translates to: SLRTLGAGIHQGFPR*AGAHLAVGCPNSGH Trigger: GTGTCCACTGTTCGGGCAGCCAACAGCGAGGTGAGCCCCGGCCCACCTTGGAAACCCCTGATGGATCCCTGCTCCCAGGGTCCTGAGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS GCA 90 bp | AGCAGGCTCAGAAAGCTCTTGAACACCCGCGGGGGAGGCATCTCCTaGCTCAGATCCAGGGTCGGGAGAAGGTCGAGCGGCTCCTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SRLRKLLNTRGGGIS*LRSRVGRRSSGSSE Trigger: CTCTGAGGAGCCGCTCGACCTTCTCCCGACCCTGGATCTGAGGCAGGAGATGCCTCCCCCGCGGGTGTTCAAGAGCTTTCTGAGCCTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000374273.8 ENST00000454819.1 ENST00000462896.1 ENST00000463973.5 ENST00000468248.5 ENST00000679710.1 |
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| CDS GCA 90 bp | GTGGACACCTCCTTGTGGAGTTTATCCAGCTCGGCCTGGAGCTGCTaGAGCTGCTGCCCCTGGGAGCGCACGCGCTCGTGGTACTCACTT | + |
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Preference number: 5 (lower is better) Translates to: VDTSLWSLSSSAWSC*SCCPWERTRSWYSL Trigger: AAGTGAGTACCACGAGCGCGTGCGCTCCCAGGGGCAGCAGCTGCAGCAGCTCCAGGCCGAGCTGGATAAACTCCACAAGGAGGTGTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000374273.8 ENST00000454819.1 ENST00000679710.1 |
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| CDS CCA 90 bp | ACTACTGGAGACCCAGTCGGTTCTGCGGGAACCCAAGGGCTCCACTaGGGCCTTGCGGACCACAGACCTATTTTCCCCTCGAGACCGGGC | + |
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Preference number: 5 (lower is better) Translates to: TTGDPVGSAGTQGLH*GLADHRPIFPSRPG Trigger: GCCCGGTCTCGAGGGGAAAATAGGTCTGTGGTCCGCAAGGCCCCAGTGGAGCCCTTGGGTTCCCGCAGAACCGACTGGGTCTCCAGTAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000454819.1 ENST00000462896.1 ENST00000463973.5 ENST00000468248.5 |
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| CDS CCA 90 bp | TCCAAGGTGGGCCGGGGCTCACCTCGCTGTTGGCTGCCCGAACAGTaGACACCTCCTTGTGGAGTTTATCCAGCTCGGCCTGGAGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SKVGRGSPRCWLPEQ*TPPCGVYPARPGAA Trigger: AGCAGCTCCAGGCCGAGCTGGATAAACTCCACAAGGAGGTGTCCACTGTTCGGGCAGCCAACAGCGAGGTGAGCCCCGGCCCACCTTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CCA 90 bp | GGTGGACGGGACCTCTGGGAGCTGGTTGCTTTGGGATGGACTTCGTaGGCACCGGGAGAAATCCCGCAGGGCTCTGGGCGGAGCTTAAGT | + |
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Preference number: 5 (lower is better) Translates to: GGRDLWELVALGWTS*APGEIPQGSGRSLS Trigger: ACTTAAGCTCCGCCCAGAGCCCTGCGGGATTTCTCCCGGTGCCCACGAAGTCCATCCCAAAGCAACCAGCTCCCAGAGGTCCCGTCCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CCA 90 bp | GCTTTTACAGGTGGACGGGACCTCTGGGAGCTGGTTGCTTTGGGATaGACTTCGTGGGCACCGGGAGAAATCCCGCAGGGCTCTGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: AFTGGRDLWELVALG*TSWAPGEIPQGSGR Trigger: CCGCCCAGAGCCCTGCGGGATTTCTCCCGGTGCCCACGAAGTCCATCCCAAAGCAACCAGCTCCCAGAGGTCCCGTCCACCTGTAAAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS TCA 90 bp | GCTGTTCCTGGGGCGCCAGCGTCCCTTCCTCTGACCTGTACATGCTaGCCAGCACGTCTCCTGCCAGGGATAACAACACGCTCAGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: AVPGAPASLPLTCTC*PARLLPGITTRSAP Trigger: AGGGGCTGAGCGTGTTGTTATCCCTGGCAGGAGACGTGCTGGTCAGCATGTACAGGTCAGAGGAAGGGACGCTGGCGCCCCAGGAACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468248.5 |
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| CDS GCA 90 bp | CATCAGGGGTTTCCAAGGTGGGCCGGGGCTCACCTCGCTGTTGGCTaGCCGAACAGTGGACACCTCCTTGTGGAGTTTATCCAGCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: HQGFPRWAGAHLAVG*PNSGHLLVEFIQLG Trigger: GCCGAGCTGGATAAACTCCACAAGGAGGTGTCCACTGTTCGGGCAGCCAACAGCGAGGTGAGCCCCGGCCCACCTTGGAAACCCCTGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS GCA 90 bp | CTTGCGGGCTGCTTTTACAGGTGGACGGGACCTCTGGGAGCTGGTTaGTTTGGGATGGACTTCGTGGGCACCGGGAGAAATCCCGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LAGCFYRWTGPLGAG*FGMDFVGTGRNPAG Trigger: CCCTGCGGGATTTCTCCCGGTGCCCACGAAGTCCATCCCAAAGCAACCAGCTCCCAGAGGTCCCGTCCACCTGTAAAAGCAGCCCGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CCA 90 bp | TGCTCAGTCCACAAGCCAGACAGCTGGGAAGTCTCTCACAGGCTTTaGTCCCACCGCAGCCCTATCCCGGCTCCAGCTCCGCCCTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: CSVHKPDSWEVSHRL*SHRSPIPAPAPPSE Trigger: TTCAGAGGGCGGAGCTGGAGCCGGGATAGGGCTGCGGTGGGACCAAAGCCTGTGAGAGACTTCCCAGCTGTCTGGCTTGTGGACTGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CCA 90 bp | GGGCTGCTTTTACAGGTGGACGGGACCTCTGGGAGCTGGTTGCTTTaGGATGGACTTCGTGGGCACCGGGAGAAATCCCGCAGGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: GLLLQVDGTSGSWLL*DGLRGHREKSRRAL Trigger: CAGAGCCCTGCGGGATTTCTCCCGGTGCCCACGAAGTCCATCCCAAAGCAACCAGCTCCCAGAGGTCCCGTCCACCTGTAAAAGCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CCA 90 bp | GAGGCTTGCGGGCTGCTTTTACAGGTGGACGGGACCTCTGGGAGCTaGTTGCTTTGGGATGGACTTCGTGGGCACCGGGAGAAATCCCGC | + |
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Preference number: 5 (lower is better) Translates to: EACGLLLQVDGTSGS*LLWDGLRGHREKSR Trigger: GCGGGATTTCTCCCGGTGCCCACGAAGTCCATCCCAAAGCAACCAGCTCCCAGAGGTCCCGTCCACCTGTAAAAGCAGCCCGCAAGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS TCA 90 bp | CCAGCCAGAATGCTGACAGAAAGAGGCTCAGCAGCGACACAGCCGTaGACAGGAAGCGGATGGAACAGACCTCCCTGGGGAACCGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: PARMLTERGSAATQP*TGSGWNRPPWGTGG Trigger: CCCTCCGGTTCCCCAGGGAGGTCTGTTCCATCCGCTTCCTGTTCACGGCTGTGTCGCTGCTGAGCCTCTTTCTGTCAGCATTCTGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468248.5 |
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| CDS CCA 90 bp | TTTGGGATGGACTTCGTGGGCACCGGGAGAAATCCCGCAGGGCTCTaGGCGGAGCTTAAGTCTCAGGACCCTGGGAGCAGGGATCCATCA | + |
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Preference number: 5 (lower is better) Translates to: FGMDFVGTGRNPAGL*AELKSQDPGSRDPS Trigger: TGATGGATCCCTGCTCCCAGGGTCCTGAGACTTAAGCTCCGCCCAGAGCCCTGCGGGATTTCTCCCGGTGCCCACGAAGTCCATCCCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS TCA 90 bp | CTCCTTAGGTTCCTGACAGAAAGAGGCTCAGCAGCGACACAGCCGTaGACAGGAAGCGGATGGAACAGACCTCCCTGGGGAACCGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: LLRFLTERGSAATQP*TGSGWNRPPWGTGG Trigger: CCCTCCGGTTCCCCAGGGAGGTCTGTTCCATCCGCTTCCTGTTCACGGCTGTGTCGCTGCTGAGCCTCTTTCTGTCAGGAACCTAAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498203.1 |
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| CDS CCA 90 bp | TTTGGGATGGACTTCGTGGGCACCGGGAGAAATCCCGCAGGGCTCTaGGCGGAGCTTAAGTCTCAGGACCCTGTACATGCTGACCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: FGMDFVGTGRNPAGL*AELKSQDPVHADQH Trigger: GTGCTGGTCAGCATGTACAGGGTCCTGAGACTTAAGCTCCGCCCAGAGCCCTGCGGGATTTCTCCCGGTGCCCACGAAGTCCATCCCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462896.1 |
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| CDS TCA 90 bp | CCTCTGAGGTTCGCACACCGTGGGCACGGACTCGATACAAGCACGTaGAACGGGGGTGGCCCCAGTTGCTTAGAATCTGGATCTTCACCT | + |
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Preference number: 5 (lower is better) Translates to: PLRFAHRGHGLDTST*NGGGPSCLESGSSP Trigger: AGGTGAAGATCCAGATTCTAAGCAACTGGGGCCACCCCCGTTTCACGTGCTTGTATCGAGTCCGTGCCCACGGTGTGCGAACCTCAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000679710.1 |
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| CDS GCA 90 bp | TTGCGGACCACAGACCTATTTTCCCCTCGAGACCGGGCCGCAGATTaGTCAGTCCACAAGCCAGACAGCTGGGAAGTCTCTCACAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LRTTDLFSPRDRAAD*SVHKPDSWEVSHRL Trigger: AAGCCTGTGAGAGACTTCCCAGCTGTCTGGCTTGTGGACTGAGCAATCTGCGGCCCGGTCTCGAGGGGAAAATAGGTCTGTGGTCCGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS GCA 90 bp | GTTCCAGAAGCTGAAGCGATTCCAGAAGTAGGCAGTGTTCCTGTCTaGGTAATCGTGGGATGTCTTCTGCAGGTCGATGGAGGCTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: VPEAEAIPEVGSVPV*VIVGCLLQVDGGSH Trigger: GTGGGAGCCTCCATCGACCTGCAGAAGACATCCCACGATTACGCAGACAGGAACACTGCCTACTTCTGGAATCGCTTCAGCTTCTGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000374273.8 ENST00000454819.1 ENST00000468248.5 ENST00000498203.1 ENST00000679710.1 |
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| CDS TCA 90 bp | TCTGCAGGTGGAAAGTCTGAATCTCCGATTTCTCAACATCGAAGGTaGATTTCCCCAAGGAAACTTCAGTTTCATCATAAACCTGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: SAGGKSESPISQHRR*ISPRKLQFHHKPGG Trigger: GCCTCCAGGTTTATGATGAAACTGAAGTTTCCTTGGGGAAATTCACCTTCGATGTTGAGAAATCGGAGATTCAGACTTTCCACCTGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000498203.1 ENST00000679710.1 |
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| CDS CCA 72 bp | GCTGCCCCTGGGAGCGCACGCGCTCGTGGTACTCACTaGAGGTGGGAGGTGGGCGCCGTGGGGTTGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: AAPGSARARGTH*RWEVGAVGLAP Trigger: GGGAGCCAACCCCACGGCGCCCACCTCCCACCTCCAGTGAGTACCACGAGCGCGTGCGCTCCCAGGGGCAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000463973.5 ENST00000468248.5 |
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| CDS GCA 72 bp | CCCGGGCGGGAGCTTCGCCGCATCCTGACCCCCTGCTaGCTAGTCACTGACGCTAAAGCCGCCGCTGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: PGRELRRILTPC*LVTDAKAAAAV Trigger: GACCGCAGCGGCGGCTTTAGCGTCAGTGACTAGGCAGCAGGGGGTCAGGATGCGGCGAAGCTCCCGCCCGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000374273.8 ENST00000679710.1 |
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| CDS GCA 72 bp | GAGCCCGGGCGGGAGCTTCGCCGCATCCTGACCCCCTaGTGCCTAGTCACTGACGCTAAAGCCGCCGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: EPGRELRRILTP*CLVTDAKAAAA Trigger: CGCAGCGGCGGCTTTAGCGTCAGTGACTAGGCAGCAGGGGGTCAGGATGCGGCGAAGCTCCCGCCCGGGCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000374273.8 ENST00000679710.1 |
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| CDS GCA 72 bp | AGACCCAGTCGGTTCCGAGGCCCCGCCCCTCACGGTTaGCGCGCCACAGGCTGTCTGCCAGTTGTGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: RPSRFRGPAPHG*RATGCLPVVAP Trigger: CGGAGCCACAACTGGCAGACAGCCTGTGGCGCGGCAACCGTGAGGGGCGGGGCCTCGGAACCGACTGGGTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374273.8 |
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| CDS TCA 72 bp | TCTTCTGCCCTCGGGCTCCCCAGGCCCGGGCTCCGCTaGCCGGAGCCCTTTGCTGTCCTCCGAGGTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: SSALGLPRPGLR*PEPFAVLRGDA Trigger: AGCATCACCTCGGAGGACAGCAAAGGGCTCCGGTCAGCGGAGCCCGGGCCTGGGGAGCCCGAGGGCAGAAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374273.8 ENST00000679710.1 |
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| CDS GCA 72 bp | GCTCCTCCGGTGTGCTCCACGCTGGGCGGTGGATGCTaGAGAGTGATGTCGCTCAGCTGCACTCGGCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: APPVCSTLGGGC*RVMSLSCTRPG Trigger: GCCGGGCCGAGTGCAGCTGAGCGACATCACTCTGCAGCATCCACCGCCCAGCGTGGAGCACACCGGAGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000468248.5 ENST00000498203.1 ENST00000679710.1 |
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| CDS CCA 72 bp | GGTCGGGAGAAGGTCGAGCGGCTCCTCAGAGACTACTaGAGACCCAGTCGGTTCCGAGGCCCCGCCCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: GREKVERLLRDY*RPSRFRGPAPH Trigger: GTGAGGGGCGGGGCCTCGGAACCGACTGGGTCTCCAGTAGTCTCTGAGGAGCCGCTCGACCTTCTCCCGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374273.8 |
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| CDS TCA 72 bp | CGGTGTGCTCCACGCTGGGCGGTGGATGCTGCAGAGTaGTGTCGCTCAGCTGCACTCGGCCCGGCAGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: RCAPRWAVDAAE*CRSAALGPAVG Trigger: TCCAACTGCCGGGCCGAGTGCAGCTGAGCGACATCACTCTGCAGCATCCACCGCCCAGCGTGGAGCACACCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000468248.5 ENST00000498203.1 ENST00000679710.1 |
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| CDS GCA 72 bp | GTGGCTCCGAGGCGCTGGCTTCTGCTGAGAGCTTCCTaGCCATGTGGTTCCTCCGGGCACTCCCGCGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: VAPRRWLLLRAS*PCGSSGHSRAQ Trigger: TTGAGCGCGGGAGTGCCCGGAGGAACCACATGGGCAGGAAGCTCTCAGCAGAAGCCAGCGCCTCGGAGCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374273.8 ENST00000679710.1 |
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| CDS GCA 72 bp | TTGGCTCCTCCGGTGTGCTCCACGCTGGGCGGTGGATaGTGCAGAGTGATGTCGCTCAGCTGCACTCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LAPPVCSTLGGG*CRVMSLSCTRP Trigger: GGGCCGAGTGCAGCTGAGCGACATCACTCTGCAGCATCCACCGCCCAGCGTGGAGCACACCGGAGGAGCCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000468248.5 ENST00000498203.1 ENST00000679710.1 |
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| CDS CCA 72 bp | ACCCTGGGAGCAGGGATCCATCAGGGGTTTCCAAGGTaGGCCGGGGCTCACCTCGCTGTTGGCTGCCCGAAC | + |
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Preference number: 6 (lower is better) Translates to: TLGAGIHQGFPR*AGAHLAVGCPN Trigger: GTTCGGGCAGCCAACAGCGAGGTGAGCCCCGGCCCACCTTGGAAACCCCTGATGGATCCCTGCTCCCAGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CAA 90 bp | CTGCCCTCGGGCTCCCCAGGCCCGGGCTCCGCTGACCGGAGCCCTTaGCTGTCCTCCGAGGTGATGCTCATTGAGCTGTTCTCGCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: LPSGSPGPGSADRSP*LSSEVMLIELFSLK Trigger: TTTCAGCGAGAACAGCTCAATGAGCATCACCTCGGAGGACAGCAAAGGGCTCCGGTCAGCGGAGCCCGGGCCTGGGGAGCCCGAGGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374273.8 ENST00000679710.1 |
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| CDS GCA 72 bp | CTGGGCGGTGGATGCTGCAGAGTGATGTCGCTCAGCTaGACTCGGCCCGGCAGTTGGATCACCACCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LGGGCCRVMSLS*TRPGSWITTWP Trigger: AGGCCAGGTGGTGATCCAACTGCCGGGCCGAGTGCAGCTGAGCGACATCACTCTGCAGCATCCACCGCCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000468248.5 ENST00000498203.1 ENST00000679710.1 |
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| CDS GCA 72 bp | CGGCTCCTCAGAGACTACTGGAGACCCAGTCGGTTCTaGGGGAACCCAAGGGCTCCACTGGGGCCTTGCGGA | + |
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Preference number: 6 (lower is better) Translates to: RLLRDYWRPSRF*GNPRAPLGPCG Trigger: TCCGCAAGGCCCCAGTGGAGCCCTTGGGTTCCCGCAGAACCGACTGGGTCTCCAGTAGTCTCTGAGGAGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000454819.1 ENST00000462896.1 ENST00000463973.5 ENST00000468248.5 |
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| CDS CCA 72 bp | GCACTGCCCTCTGCCCCCTCTGAGGTTCGCACACCGTaGGCACGGACTCGATACAAGCACGTGAAACGGGGG | + |
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Preference number: 6 (lower is better) Translates to: ALPSAPSEVRTP*ARTRYKHVKRG Trigger: CCCCCGTTTCACGTGCTTGTATCGAGTCCGTGCCCACGGTGTGCGAACCTCAGAGGGGGCAGAGGGCAGTGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000679710.1 |
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| CDS CCA 72 bp | GACTTCGTGGGCACCGGGAGAAATCCCGCAGGGCTCTaGGCGGAGCTTAAGTCTCAGGACCCTGGGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: DFVGTGRNPAGL*AELKSQDPGSR Trigger: CCTGCTCCCAGGGTCCTGAGACTTAAGCTCCGCCCAGAGCCCTGCGGGATTTCTCCCGGTGCCCACGAAGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CCA 72 bp | GACCTCTGGGAGCTGGTTGCTTTGGGATGGACTTCGTaGGCACCGGGAGAAATCCCGCAGGGCTCTGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: DLWELVALGWTS*APGEIPQGSGR Trigger: CCGCCCAGAGCCCTGCGGGATTTCTCCCGGTGCCCACGAAGTCCATCCCAAAGCAACCAGCTCCCAGAGGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CCA 72 bp | GGTGGACGGGACCTCTGGGAGCTGGTTGCTTTGGGATaGACTTCGTGGGCACCGGGAGAAATCCCGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: GGRDLWELVALG*TSWAPGEIPQG Trigger: GCCCTGCGGGATTTCTCCCGGTGCCCACGAAGTCCATCCCAAAGCAACCAGCTCCCAGAGGTCCCGTCCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CCA 72 bp | GGTCGGGAGAAGGTCGAGCGGCTCCTCAGAGACTACTaGAGACCCAGTCGGTTGGTTGCCGCGCCACAGGCT | + |
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Preference number: 6 (lower is better) Translates to: GREKVERLLRDY*RPSRLVAAPQA Trigger: AGCCTGTGGCGCGGCAACCAACCGACTGGGTCTCCAGTAGTCTCTGAGGAGCCGCTCGACCTTCTCCCGACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679710.1 |
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| CDS TCA 72 bp | GTCTGCCAGTTGTGGCTCCGAGGCGCTGGCTTCTGCTaGGAGCTTCCTGCCCATGTGGTTCCTCCGGGCACT | + |
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Preference number: 6 (lower is better) Translates to: VCQLWLRGAGFC*ELPAHVVPPGT Trigger: AGTGCCCGGAGGAACCACATGGGCAGGAAGCTCTCAGCAGAAGCCAGCGCCTCGGAGCCACAACTGGCAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374273.8 ENST00000679710.1 |
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| CDS CCA 72 bp | GCCACAGGCTGTCTGCCAGTTGTGGCTCCGAGGCGCTaGCTTCTGCTGAGAGCTTCCTGCCCATGTGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: ATGCLPVVAPRR*LLLRASCPCGS Trigger: GGAACCACATGGGCAGGAAGCTCTCAGCAGAAGCCAGCGCCTCGGAGCCACAACTGGCAGACAGCCTGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374273.8 ENST00000679710.1 |
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| CDS CCA 72 bp | GACCCAGTCGGTTCTGCGGGAACCCAAGGGCTCCACTaGGGCCTTGCGGACCACAGACCTATTTTCCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: DPVGSAGTQGLH*GLADHRPIFPS Trigger: CGAGGGGAAAATAGGTCTGTGGTCCGCAAGGCCCCAGTGGAGCCCTTGGGTTCCCGCAGAACCGACTGGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000454819.1 ENST00000462896.1 ENST00000463973.5 ENST00000468248.5 |
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| CDS CCA 72 bp | GGTCGGGAGAAGGTCGAGCGGCTCCTCAGAGACTACTaGAGACCCAGTCGGTTCTGCGGGAACCCAAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GREKVERLLRDY*RPSRFCGNPRA Trigger: AGCCCTTGGGTTCCCGCAGAACCGACTGGGTCTCCAGTAGTCTCTGAGGAGCCGCTCGACCTTCTCCCGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000454819.1 ENST00000462896.1 ENST00000463973.5 ENST00000468248.5 |
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| CDS CCA 72 bp | CACAAGCCAGACAGCTGGGAAGTCTCTCACAGGCTTTaGTCCCACCGCAGCCCTATCCCGGCTCCAGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: HKPDSWEVSHRL*SHRSPIPAPAP Trigger: CGGAGCTGGAGCCGGGATAGGGCTGCGGTGGGACCAAAGCCTGTGAGAGACTTCCCAGCTGTCTGGCTTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CCA 72 bp | GGCCGGGGCTCACCTCGCTGTTGGCTGCCCGAACAGTaGACACCTCCTTGTGGAGTTTATCCAGCTCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GRGSPRCWLPEQ*TPPCGVYPARP Trigger: AGGCCGAGCTGGATAAACTCCACAAGGAGGTGTCCACTGTTCGGGCAGCCAACAGCGAGGTGAGCCCCGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CAA 72 bp | AGGGGTTTCCAAGGTGGGCCGGGGCTCACCTCGCTGTaGGCTGCCCGAACAGTGGACACCTCCTTGTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RGFQGGPGLTSL*AARTVDTSLWS Trigger: ACTCCACAAGGAGGTGTCCACTGTTCGGGCAGCCAACAGCGAGGTGAGCCCCGGCCCACCTTGGAAACCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CAA 90 bp | CGGGCTGCTTTTACAGGTGGACGGGACCTCTGGGAGCTGGTTGCTTaGGGATGGACTTCGTGGGCACCGGGAGAAATCCCGCAGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RAAFTGGRDLWELVA*GWTSWAPGEIPQGS Trigger: AGAGCCCTGCGGGATTTCTCCCGGTGCCCACGAAGTCCATCCCAAAGCAACCAGCTCCCAGAGGTCCCGTCCACCTGTAAAAGCAGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CAA 90 bp | GCTTGCGGGCTGCTTTTACAGGTGGACGGGACCTCTGGGAGCTGGTaGCTTTGGGATGGACTTCGTGGGCACCGGGAGAAATCCCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ACGLLLQVDGTSGSW*LWDGLRGHREKSRR Trigger: CCTGCGGGATTTCTCCCGGTGCCCACGAAGTCCATCCCAAAGCAACCAGCTCCCAGAGGTCCCGTCCACCTGTAAAAGCAGCCCGCAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS TCA 72 bp | GGGGCGCCAGCGTCCCTTCCTCTGACCTGTACATGCTaGCCAGCACGTCTCCTGCCAGGGATAACAACACGC | + |
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Preference number: 6 (lower is better) Translates to: GAPASLPLTCTC*PARLLPGITTR Trigger: GCGTGTTGTTATCCCTGGCAGGAGACGTGCTGGTCAGCATGTACAGGTCAGAGGAAGGGACGCTGGCGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468248.5 |
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| CDS CCA 72 bp | GGGCTGCTTTTACAGGTGGACGGGACCTCTGGGAGCTaGTTGCTTTGGGATGGACTTCGTGGGCACCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: GLLLQVDGTSGS*LLWDGLRGHRE Trigger: CTCCCGGTGCCCACGAAGTCCATCCCAAAGCAACCAGCTCCCAGAGGTCCCGTCCACCTGTAAAAGCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CAA 90 bp | GGATCCATCAGGGGTTTCCAAGGTGGGCCGGGGCTCACCTCGCTGTaGGCTGCCCGAACAGTGGACACCTCCTTGTGGAGTTTATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GSIRGFQGGPGLTSL*AARTVDTSLWSLSS Trigger: GCTGGATAAACTCCACAAGGAGGTGTCCACTGTTCGGGCAGCCAACAGCGAGGTGAGCCCCGGCCCACCTTGGAAACCCCTGATGGATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS TCA 72 bp | AAAGAGCTGTTCCTGGGGCGCCAGCGTCCCTTCCTCTaGCCTGTACATGCTGACCAGCACGTCTCCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: KELFLGRQRPFL*PVHADQHVSCQ Trigger: CTGGCAGGAGACGTGCTGGTCAGCATGTACAGGTCAGAGGAAGGGACGCTGGCGCCCCAGGAACAGCTCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468248.5 |
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| CDS CCA 72 bp | AGAGTGATGTCGCTCAGCTGCACTCGGCCCGGCAGTTaGATCACCACCTGGCCTTGGTCGCCTTCAAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: RVMSLSCTRPGS*ITTWPWSPSKA Trigger: GGCTTTTGAAGGCGACCAAGGCCAGGTGGTGATCCAACTGCCGGGCCGAGTGCAGCTGAGCGACATCACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000454819.1 ENST00000468248.5 ENST00000498203.1 ENST00000679710.1 |
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| CDS CCA 72 bp | TTACAGGTGGACGGGACCTCTGGGAGCTGGTTGCTTTaGGATGGACTTCGTGGGCACCGGGAGAAATCCCGC | + |
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Preference number: 6 (lower is better) Translates to: LQVDGTSGSWLL*DGLRGHREKSR Trigger: GCGGGATTTCTCCCGGTGCCCACGAAGTCCATCCCAAAGCAACCAGCTCCCAGAGGTCCCGTCCACCTGTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CCA 72 bp | GGCTTGCGGGCTGCTTTTACAGGTGGACGGGACCTCTaGGAGCTGGTTGCTTTGGGATGGACTTCGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: GLRAAFTGGRDL*ELVALGWTSWA Trigger: TGCCCACGAAGTCCATCCCAAAGCAACCAGCTCCCAGAGGTCCCGTCCACCTGTAAAAGCAGCCCGCAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CCA 72 bp | GACTTCGTGGGCACCGGGAGAAATCCCGCAGGGCTCTaGGCGGAGCTTAAGTCTCAGGACCCTGTACATGCT | + |
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Preference number: 6 (lower is better) Translates to: DFVGTGRNPAGL*AELKSQDPVHA Trigger: AGCATGTACAGGGTCCTGAGACTTAAGCTCCGCCCAGAGCCCTGCGGGATTTCTCCCGGTGCCCACGAAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462896.1 |
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| CDS CAA 72 bp | CTCTCGCTGTTGGCTGCCCGAACAGTGGACACCTCCTaGTGGAGTTTATCCAGCTCGGCCTGGAGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LSLLAARTVDTS*WSLSSSAWSCC Trigger: GCAGCAGCTCCAGGCCGAGCTGGATAAACTCCACAAGGAGGTGTCCACTGTTCGGGCAGCCAACAGCGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000374273.8 ENST00000454819.1 ENST00000468248.5 ENST00000679710.1 |
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| CDS CAA 72 bp | CAGAGTGATGTCGCTCAGCTGCACTCGGCCCGGCAGTaGGATCACCACCTGGCCTTGGTCGCCTTCAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: QSDVAQLHSARQ*DHHLALVAFKS Trigger: GCTTTTGAAGGCGACCAAGGCCAGGTGGTGATCCAACTGCCGGGCCGAGTGCAGCTGAGCGACATCACTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000454819.1 ENST00000468248.5 ENST00000498203.1 ENST00000679710.1 |
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| CDS CAA 72 bp | ACCTCGCTGTTGGCTGCCCGAACAGTGGACACCTCCTaGTGGAGTTTATCCAGCTCGGCCTGGAGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TSLLAARTVDTS*WSLSSSAWSCC Trigger: GCAGCAGCTCCAGGCCGAGCTGGATAAACTCCACAAGGAGGTGTCCACTGTTCGGGCAGCCAACAGCGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS GCA 72 bp | TTTCCAAGGTGGGCCGGGGCTCACCTCGCTGTTGGCTaGCCGAACAGTGGACACCTCCTTGTGGAGTTTATC | + |
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Preference number: 6 (lower is better) Translates to: FPRWAGAHLAVG*PNSGHLLVEFI Trigger: GATAAACTCCACAAGGAGGTGTCCACTGTTCGGGCAGCCAACAGCGAGGTGAGCCCCGGCCCACCTTGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS CAA 72 bp | GAGGTGATGCTCATTGAGCTGTTCTCGCTGAAAAAGTaGGGCGTGTGCTTGCGCGAGGACGAGGCCGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: EVMLIELFSLKK*GVCLREDEAEP Trigger: GGGCTCGGCCTCGTCCTCGCGCAAGCACACGCCCAACTTTTTCAGCGAGAACAGCTCAATGAGCATCACCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000374273.8 ENST00000679710.1 |
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| CDS TCA 72 bp | TTCGCACACCGTGGGCACGGACTCGATACAAGCACGTaGAACGGGGGTGGCCCCAGTTGCTTAGAATCTGGA | + |
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Preference number: 6 (lower is better) Translates to: FAHRGHGLDTST*NGGGPSCLESG Trigger: TCCAGATTCTAAGCAACTGGGGCCACCCCCGTTTCACGTGCTTGTATCGAGTCCGTGCCCACGGTGTGCGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000679710.1 |
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| CDS TCA 72 bp | ATGCTGACAGAAAGAGGCTCAGCAGCGACACAGCCGTaGACAGGAAGCGGATGGAACAGACCTCCCTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: MLTERGSAATQP*TGSGWNRPPWG Trigger: TCCCCAGGGAGGTCTGTTCCATCCGCTTCCTGTTCACGGCTGTGTCGCTGCTGAGCCTCTTTCTGTCAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468248.5 |
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| CDS TCA 72 bp | TTCCTGACAGAAAGAGGCTCAGCAGCGACACAGCCGTaGACAGGAAGCGGATGGAACAGACCTCCCTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: FLTERGSAATQP*TGSGWNRPPWG Trigger: TCCCCAGGGAGGTCTGTTCCATCCGCTTCCTGTTCACGGCTGTGTCGCTGCTGAGCCTCTTTCTGTCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498203.1 |
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| CDS GCA 72 bp | GAACACGTGGGGCTCCAGGATAACCGTGGGCGGCCGTaGGTAGTTCCAGAAGCTGAAGCGATTCCAGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: EHVGLQDNRGRP*VVPEAEAIPEV Trigger: TACTTCTGGAATCGCTTCAGCTTCTGGAACTACGCACGGCCGCCCACGGTTATCCTGGAGCCCCACGTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000374273.8 ENST00000454819.1 ENST00000468248.5 ENST00000498203.1 ENST00000679710.1 |
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| CDS CCA 72 bp | ACGTCTCCTGCCAGGGATAACAACACGCTCAGCCCCTaGAAGAGCAGGCTCAGAAAGCTCTTGAACACCCGC | + |
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Preference number: 6 (lower is better) Translates to: TSPARDNNTLSP*KSRLRKLLNTR Trigger: GCGGGTGTTCAAGAGCTTTCTGAGCCTGCTCTTCCAGGGGCTGAGCGTGTTGTTATCCCTGGCAGGAGACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000374273.8 ENST00000454819.1 ENST00000462896.1 ENST00000463973.5 ENST00000468248.5 ENST00000679710.1 |
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| CDS CAA 72 bp | CTGCTTTTACAGGTGGACGGGACCTCTGGGAGCTGGTaGCTTTGGGATGGACTTCGTGGGCACCGGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LLLQVDGTSGSW*LWDGLRGHREK Trigger: TTTCTCCCGGTGCCCACGAAGTCCATCCCAAAGCAACCAGCTCCCAGAGGTCCCGTCCACCTGTAAAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS GCA 72 bp | ACAGACCTATTTTCCCCTCGAGACCGGGCCGCAGATTaGTCAGTCCACAAGCCAGACAGCTGGGAAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: TDLFSPRDRAAD*SVHKPDSWEVS Trigger: AGAGACTTCCCAGCTGTCTGGCTTGTGGACTGAGCAATCTGCGGCCCGGTCTCGAGGGGAAAATAGGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000454819.1 ENST00000462896.1 ENST00000463973.5 |
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| CDS GCA 72 bp | TGCTTTTACAGGTGGACGGGACCTCTGGGAGCTGGTTaGTTTGGGATGGACTTCGTGGGCACCGGGAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: CFYRWTGPLGAG*FGMDFVGTGRN Trigger: ATTTCTCCCGGTGCCCACGAAGTCCATCCCAAAGCAACCAGCTCCCAGAGGTCCCGTCCACCTGTAAAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463973.5 |
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| CDS TCA 72 bp | CCGGAGCCCTTTGCTGTCCTCCGAGGTGATGCTCATTaGGCTGTTCTCGCTGAAAAAGTTGGGCGTGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: PEPFAVLRGDAH*AVLAEKVGRVL Trigger: AAGCACACGCCCAACTTTTTCAGCGAGAACAGCTCAATGAGCATCACCTCGGAGGACAGCAAAGGGCTCCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000374273.8 ENST00000679710.1 |
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| CDS TCA 72 bp | ATGCTGACAGAAAGAGGCTCAGCAGCGACACAGCCGTaGACAGGAAGCGGATGGAACAGACCTCCCTGTACA | + |
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Preference number: 6 (lower is better) Translates to: MLTERGSAATQP*TGSGWNRPPCT Trigger: TGTACAGGGAGGTCTGTTCCATCCGCTTCCTGTTCACGGCTGTGTCGCTGCTGAGCCTCTTTCTGTCAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000374273.8 ENST00000454819.1 ENST00000463973.5 ENST00000679710.1 |
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| CDS GCA 72 bp | GCTGAAGCGATTCCAGAAGTAGGCAGTGTTCCTGTCTaGGTAATCGTGGGATGTCTTCTGCAGGTCGATGGA | + |
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Preference number: 6 (lower is better) Translates to: AEAIPEVGSVPV*VIVGCLLQVDG Trigger: TCCATCGACCTGCAGAAGACATCCCACGATTACGCAGACAGGAACACTGCCTACTTCTGGAATCGCTTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000374273.8 ENST00000454819.1 ENST00000468248.5 ENST00000498203.1 ENST00000679710.1 |
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| CDS CAA 72 bp | ACTCGATACAAGCACGTGAAACGGGGGTGGCCCCAGTaGCTTAGAATCTGGATCTTCACCTTGGGAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TRYKHVKRGWPQ*LRIWIFTLGKA Trigger: TGCCTTTCCCAAGGTGAAGATCCAGATTCTAAGCAACTGGGGCCACCCCCGTTTCACGTGCTTGTATCGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000374273.8 ENST00000430878.1 ENST00000679710.1 |
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