Pregenerated sensors for SPAG16-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000196096Ensembl transcript IDs: ENST00000360083.3
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGCACTGTGCACCTGGAAAAGCTGCAGACACTCAATGCCAGCCCATaGAAGCAGCCAGGAGGGAGATTGTACCCTGCAAAGCCACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CTVHLEKLQTLNASP*KQPGGRLYPAKPQG Trigger: CCCCTGTGGCTTTGCAGGGTACAATCTCCCTCCTGGCTGCTTTCATGGGCTGGCATTGAGTGTCTGCAGCTTTTCCAGGTGCACAGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS GCA 90 bp | ACTCAATGCCAGCCCATGAAAGCAGCCAGGAGGGAGATTGTACCCTaGAAAGCCACAGGGGTGGAGCTGCCCAAGACCATGGGAAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: TQCQPMKAARREIVP*KATGVELPKTMGNH Trigger: ATGGTTTCCCATGGTCTTGGGCAGCTCCACCCCTGTGGCTTTGCAGGGTACAATCTCCCTCCTGGCTGCTTTCATGGGCTGGCATTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS GCA 90 bp | GCCCTTCTCATCACAGGCCCCAGAAAGGTAGATCCACCGATAGCTTaGACTGTGCACCTGGAAAAGCTGCAGACACTCAATGCCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALLITGPRKVDPPIA*TVHLEKLQTLNASP Trigger: TGGGCTGGCATTGAGTGTCTGCAGCTTTTCCAGGTGCACAGTGCAAGCTATCGGTGGATCTACCTTTCTGGGGCCTGTGATGAGAAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS GCA 90 bp | ACCGATAGCTTGCACTGTGCACCTGGAAAAGCTGCAGACACTCAATaGCAGCCCATGAAAGCAGCCAGGAGGGAGATTGTACCCTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TDSLHCAPGKAADTQ*QPMKAARREIVPCK Trigger: TTTGCAGGGTACAATCTCCCTCCTGGCTGCTTTCATGGGCTGGCATTGAGTGTCTGCAGCTTTTCCAGGTGCACAGTGCAAGCTATCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CCA 90 bp | AGATTGTACCCTGCAAAGCCACAGGGGTGGAGCTGCCCAAGACCATaGGAAACCATCTCTTGCATCAGCTTGACCTTTTCTAGTAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLYPAKPQGWSCPRP*ETISCISLTFSSSF Trigger: AAAACTACTAGAAAAGGTCAAGCTGATGCAAGAGATGGTTTCCCATGGTCTTGGGCAGCTCCACCCCTGTGGCTTTGCAGGGTACAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CCA 90 bp | ATGGGCAAGAATCAAGAGAAAGGTAATTCAGAGACGACAACGAAGTaGGAAAGAAATTACAGGGTCAAAGCGAAAGAAAACCAAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: MGKNQEKGNSETTTK*ERNYRVKAKENQAA Trigger: AGCAGCTTGGTTTTCTTTCGCTTTGACCCTGTAATTTCTTTCCCACTTCGTTGTCGTCTCTGAATTACCTTTCTCTTGATTCTTGCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS TCA 90 bp | TTTCTAGTAGTTTTCCCTGGGAACACTTGGGGATCTACAAACATCTaGAATTGGAGGATGCTAATGGGCAAGAATCAAGAGAAAGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: FLVVFPGNTWGSTNI*NWRMLMGKNQEKGN Trigger: ATTACCTTTCTCTTGATTCTTGCCCATTAGCATCCTCCAATTTCAGATGTTTGTAGATCCCCAAGTGTTCCCAGGGAAAACTACTAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS TCA 90 bp | AAGACAGGAAAATGTCGGAGAGTTTGGAACTTCCTAGAGACTTGTTaGATGGCTTTGCCCAAAATGCTGATAGCAATATGGACAATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KTGKCRRVWNFLETC*MALPKMLIAIWTMK Trigger: TTTCATTGTCCATATTGCTATCAGCATTTTGGGCAAAGCCATTCAACAAGTCTCTAGGAAGTTCCAAACTCTCCGACATTTTCCTGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS GCA 72 bp | CAGCCCATGAAAGCAGCCAGGAGGGAGATTGTACCCTaGAAAGCCACAGGGGTGGAGCTGCCCAAGACCATG | + |
|
Preference number: 6 (lower is better) Translates to: QPMKAARREIVP*KATGVELPKTM Trigger: CATGGTCTTGGGCAGCTCCACCCCTGTGGCTTTGCAGGGTACAATCTCCCTCCTGGCTGCTTTCATGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CCA 72 bp | CCAGGAGGGAGATTGTACCCTGCAAAGCCACAGGGGTaGAGCTGCCCAAGACCATGGGAAACCATCTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGGRLYPAKPQG*SCPRPWETISC Trigger: GCAAGAGATGGTTTCCCATGGTCTTGGGCAGCTCCACCCCTGTGGCTTTGCAGGGTACAATCTCCCTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS GCA 72 bp | GGGAGATTGTACCCTGCAAAGCCACAGGGGTGGAGCTaGCCAAGACCATGGGAAACCATCTCTTGCATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRLYPAKPQGWS*PRPWETISCIS Trigger: GCTGATGCAAGAGATGGTTTCCCATGGTCTTGGGCAGCTCCACCCCTGTGGCTTTGCAGGGTACAATCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CAA 90 bp | AGCCCTTCTCATCACAGGCCCCAGAAAGGTAGATCCACCGATAGCTaGCACTGTGCACCTGGAAAAGCTGCAGACACTCAATGCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SPSHHRPQKGRSTDS*HCAPGKAADTQCQP Trigger: GGGCTGGCATTGAGTGTCTGCAGCTTTTCCAGGTGCACAGTGCAAGCTATCGGTGGATCTACCTTTCTGGGGCCTGTGATGAGAAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CCA 72 bp | CCTGCAAAGCCACAGGGGTGGAGCTGCCCAAGACCATaGGAAACCATCTCTTGCATCAGCTTGACCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PAKPQGWSCPRP*ETISCISLTFS Trigger: AGAAAAGGTCAAGCTGATGCAAGAGATGGTTTCCCATGGTCTTGGGCAGCTCCACCCCTGTGGCTTTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS GCA 72 bp | TTGCACTGTGCACCTGGAAAAGCTGCAGACACTCAATaGCAGCCCATGAAAGCAGCCAGGAGGGAGATTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LHCAPGKAADTQ*QPMKAARREIV Trigger: TACAATCTCCCTCCTGGCTGCTTTCATGGGCTGGCATTGAGTGTCTGCAGCTTTTCCAGGTGCACAGTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CAA 72 bp | CATCACAGGCCCCAGAAAGGTAGATCCACCGATAGCTaGCACTGTGCACCTGGAAAAGCTGCAGACACTCAA | + |
|
Preference number: 6 (lower is better) Translates to: HHRPQKGRSTDS*HCAPGKAADTQ Trigger: TTGAGTGTCTGCAGCTTTTCCAGGTGCACAGTGCAAGCTATCGGTGGATCTACCTTTCTGGGGCCTGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS GCA 72 bp | ATCACAGGCCCCAGAAAGGTAGATCCACCGATAGCTTaGACTGTGCACCTGGAAAAGCTGCAGACACTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: ITGPRKVDPPIA*TVHLEKLQTLN Trigger: ATTGAGTGTCTGCAGCTTTTCCAGGTGCACAGTGCAAGCTATCGGTGGATCTACCTTTCTGGGGCCTGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS TCA 72 bp | GCCCAAGACCATGGGAAACCATCTCTTGCATCAGCTTaGCCTTTTCTAGTAGTTTTCCCTGGGAACACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AQDHGKPSLASA*PFLVVFPGNTW Trigger: CCAAGTGTTCCCAGGGAAAACTACTAGAAAAGGTCAAGCTGATGCAAGAGATGGTTTCCCATGGTCTTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CAA 72 bp | TGCCCAAGACCATGGGAAACCATCTCTTGCATCAGCTaGACCTTTTCTAGTAGTTTTCCCTGGGAACACTTG | + |
|
Preference number: 6 (lower is better) Translates to: CPRPWETISCIS*TFSSSFPWEHL Trigger: CAAGTGTTCCCAGGGAAAACTACTAGAAAAGGTCAAGCTGATGCAAGAGATGGTTTCCCATGGTCTTGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CAA 72 bp | TTGGAGGGCTCAGAAGACAGGAAAATGTCGGAGAGTTaGGAACTTCCTAGAGACTTGTTGAATGGCTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LEGSEDRKMSES*ELPRDLLNGFA Trigger: GGCAAAGCCATTCAACAAGTCTCTAGGAAGTTCCAAACTCTCCGACATTTTCCTGTCTTCTGAGCCCTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CAA 72 bp | CTTTGGAACTTTGTAATAGGCAGAGGTTGGAACAGCTaGGAGGGCTCAGAAGACAGGAAAATGTCGGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LWNFVIGRGWNS*EGSEDRKMSES Trigger: ACTCTCCGACATTTTCCTGTCTTCTGAGCCCTCCAAGCTGTTCCAACCTCTGCCTATTACAAAGTTCCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CAA 90 bp | GCCAAAAATGTGAAAGCAACTTTGGAACTTTGTAATAGGCAGAGGTaGGAACAGCTTGGAGGGCTCAGAAGACAGGAAAATGTCGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AKNVKATLELCNRQR*EQLGGLRRQENVGE Trigger: CTCTCCGACATTTTCCTGTCTTCTGAGCCCTCCAAGCTGTTCCAACCTCTGCCTATTACAAAGTTCCAAAGTTGCTTTCACATTTTTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CAA 72 bp | CCCTGGGAACACTTGGGGATCTACAAACATCTGAAATaGGAGGATGCTAATGGGCAAGAATCAAGAGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PWEHLGIYKHLK*EDANGQESRER Trigger: CCTTTCTCTTGATTCTTGCCCATTAGCATCCTCCAATTTCAGATGTTTGTAGATCCCCAAGTGTTCCCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CAA 72 bp | GTGAAAGCAACTTTGGAACTTTGTAATAGGCAGAGGTaGGAACAGCTTGGAGGGCTCAGAAGACAGGAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: VKATLELCNRQR*EQLGGLRRQEN Trigger: ATTTTCCTGTCTTCTGAGCCCTCCAAGCTGTTCCAACCTCTGCCTATTACAAAGTTCCAAAGTTGCTTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CAA 72 bp | GGTTTTCAAAACAGGAGTTCCCTGCACAAGCTCTCTTaGCCTGCTGACATTGATATAAGATGTGACTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GFQNRSSLHKLS*PADIDIRCDLL Trigger: GAGCAAGTCACATCTTATATCAATGTCAGCAGGCAAAGAGAGCTTGTGCAGGGAACTCCTGTTTTGAAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS TCA 72 bp | AAATGTCGGAGAGTTTGGAACTTCCTAGAGACTTGTTaGATGGCTTTGCCCAAAATGCTGATAGCAATATGG | + |
|
Preference number: 6 (lower is better) Translates to: KCRRVWNFLETC*MALPKMLIAIW Trigger: CCATATTGCTATCAGCATTTTGGGCAAAGCCATTCAACAAGTCTCTAGGAAGTTCCAAACTCTCCGACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS TCA 72 bp | ACTGTTCTTGTGGTAGTGAATAAGTCACACAAGATCTaGTGGTTTTCAAAACAGGAGTTCCCTGCACAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TVLVVVNKSHKI*WFSKQEFPAQA Trigger: AGCTTGTGCAGGGAACTCCTGTTTTGAAAACCATCAGATCTTGTGTGACTTATTCACTACCACAAGAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CCA 72 bp | GTAATCTCAGATGGAGATGAGGACCTTGTTGGGAACTaGAGCAAAGGTGGCTCTTGTTATGTTTTAATAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VISDGDEDLVGN*SKGGSCYVLIK Trigger: CTTTATTAAAACATAACAAGAGCCACCTTTGCTCCAGTTCCCAACAAGGTCCTCATCTCCATCTGAGATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CAA 72 bp | AGGAAAATGTCGGAGAGTTTGGAACTTCCTAGAGACTaGTTGAATGGCTTTGCCCAAAATGCTGATAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: RKMSESLELPRD*LNGFAQNADSN Trigger: ATTGCTATCAGCATTTTGGGCAAAGCCATTCAACAAGTCTCTAGGAAGTTCCAAACTCTCCGACATTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CAA 90 bp | TCAGAAGACAGGAAAATGTCGGAGAGTTTGGAACTTCCTAGAGACTaGTTGAATGGCTTTGCCCAAAATGCTGATAGCAATATGGACAAT | + |
|
Preference number: 6 (lower is better) Translates to: SEDRKMSESLELPRD*LNGFAQNADSNMDN Trigger: ATTGTCCATATTGCTATCAGCATTTTGGGCAAAGCCATTCAACAAGTCTCTAGGAAGTTCCAAACTCTCCGACATTTTCCTGTCTTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CAA 72 bp | AAAATGTCGGAGAGTTTGGAACTTCCTAGAGACTTGTaGAATGGCTTTGCCCAAAATGCTGATAGCAATATG | + |
|
Preference number: 6 (lower is better) Translates to: KMSESLELPRDL*NGFAQNADSNM Trigger: CATATTGCTATCAGCATTTTGGGCAAAGCCATTCAACAAGTCTCTAGGAAGTTCCAAACTCTCCGACATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS CAA 72 bp | TGGTTTGGCTGTGTCCCACCCAAATATCATCTTGAATaGTACTCCCATAATTCTCACATGTTGAGGGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: WFGCVPPKYHLE*YSHNSHMLREK Trigger: TTTTTCCCTCAACATGTGAGAATTATGGGAGTACAATTCAAGATGATATTTGGGTGGGACACAGCCAAACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||
| CDS GCA 72 bp | TCTTGTTATGTTTTAATAAAGAGATTAGTGGCATTTTaGCCCTGCCCTAGAGATTTGTCGAACTTTGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: SCYVLIKRLVAF*PCPRDLSNFEL Trigger: AAGTTCAAAGTTCGACAAATCTCTAGGGCAGGGGCAAAATGCCACTAATCTCTTTATTAAAACATAACAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360083.3 |
||