RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPAG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104450

Ensembl transcript IDs: ENST00000251809.4, ENST00000388798.7, ENST00000519409.1, ENST00000519424.1, ENST00000520508.5, ENST00000520643.5, ENST00000523302.1

Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTGAAGGAAAATGGGTTTaGGAGATTCTACCAAGCTGT +
Preference number: 2 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFEGKWV*EILPSC
Trigger: ACAGCTTGGTAGAATCTCTCAAACCCATTTTCCTTC...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520508.5
3UTR-3UTR TCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTGACCAGGAATTAAACTaGGCACTAGAAAAAGGTGAC +
Preference number: 2 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFDQELN*ALEKGD
Trigger: GTCACCTTTTTCTAGTGCTCAGTTTAATTCCTGGTC...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000520508.5
3UTR-3UTR GCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAGCCAAGTTTTATCCATaGAACTCTTTTACAATACCA +
Preference number: 2 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSAKFYP*NSFTIP
Trigger: TGGTATTGTAAAAGAGTTGCATGGATAAAACTTGGC...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
3UTR-3UTR CCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTAAGTTAACTGGCAAATaGTCTGTGTCAAATAAACAC +
Preference number: 2 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFKLTGK*SVSNKH
Trigger: GTGTTTATTTGACACAGACCATTTGCCAGTTAACTT...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520508.5
3UTR-3UTR CAA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTAGAAGGAAAATGGGTTaGAGAGATTCTACCAAGCTG +
Preference number: 3 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFRRKMG*RDSTKL
Trigger: CAGCTTGGTAGAATCTCTCAAACCCATTTTCCTTCT...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR TCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCATCTGGATGTTGCCCATaGCGCACGGCTGGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSSGCCP*RTAGRR
Trigger: GCGCCGCCCAGCCGTGCGTCATGGGCAACATCCAGA...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTTTGGGTCACCAGGGCTaGCCGCGCCGGTGGACCCGG +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFLGHQG*PRRWTR
Trigger: CCGGGTCCACCGGCGCGGTCAGCCCTGGTGACCCAA...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR GCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTGCCGCCTCGGCGAACTaGCCGCTTCGGAACAGCTCG +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSAASAN*PLRNSS
Trigger: CGAGCTGTTCCGAAGCGGGCAGTTCGCCGAGGCGGC...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCATTGCCGCCGAGTACTTaGCGGCCGCCTCGGCGAACT +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSLPPST*RPPRRT
Trigger: AGTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAA...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTAGCGGCGCCAGGACCTaGCGGGACTGGGGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFSGART*RDWGAP
Trigger: TGGGGCTCCCCAGTCCCGGCAGGTCCTGGCGCCGCT...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR TCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGTCTGGATGTTGCCCATaGCGCACGGCTGGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKSGCCP*RTAGRR
Trigger: GCGCCGCCCAGCCGTGCGTCATGGGCAACATCCAGA...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGCCCTTGCCGGCCGCTTaGCGCCTTCGGCTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKPLPAA*RLRLCQ
Trigger: CTGGCAAAGCCGAAGGCGGCAAGCGGCCGGCAAGGG...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGGCCGCCTCGGCGAACTaGCCGCTTCGGAACAGCTCG +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKAASAN*PLRNSS
Trigger: CGAGCTGTTCCGAAGCGGGCAGTTCGCCGAGGCGGC...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTTGCCGCCGAGTACTTaGCGGCCGCCTCGGCGAACT +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSLPPST*RPPRRT
Trigger: AGTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTCTCCAGGAGCGCGATTaGCGCCGAGTACTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSLQERD*RRVLAG
Trigger: GCCGGCAAGTACTCGGCGGCAATCGCGCTCCTGGAG...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTAGGACCTGCCGGGACTaGGGAGCCCCACAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFRTCRD*GAPQPS
Trigger: GCTGGGCTGTGGGGCTCCCCAGTCCCGGCAGGTCCT...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR GCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCACATGGAGACCTCCCCTaGAGGTCTTCCAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSHGDLP*RSSRLL
Trigger: GAGGAGCCTGGAAGACCTGCAGGGGAGGTCTCCATG...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTAACAGCTCGTTGCCCTaGCTCTTCAGGCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSNSSLP*LFRPAG
Trigger: CCCTGCCGGCCTGAAGAGCCAGGGCAACGAGCTGTT...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAATGCCCTGCTGGCGATaGCTGCTGGAGTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSMPCWR*LLESPA
Trigger: AGCAGGAGACTCCAGCAGCCATCGCCAGCAGGGCAT...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTTCGGAACAGCTCGTTaGCCTGGCTCTTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSFGTAR*PGSSGR
Trigger: CCGGCCTGAAGAGCCAGGGCAACGAGCTGTTCCGAA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTGCCGGATGCCAAGCTTaGAGTGGCACAGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSAGCQA*SGTEAG
Trigger: GCCTGCTTCTGTGCCACTGCAAGCTTGGCATCCGGC...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCATCATCTGTGATGCCCTaGTGGCGATGGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSSSVMP*WRWLLE
Trigger: CTCCAGCAGCCATCGCCAGCAGGGCATCACAGATGA...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTCATGGAGACCTCCCCTaGAGGTCTTCCAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSHGDLP*RSSRLL
Trigger: GAGGAGCCTGGAAGACCTGCAGGGGAGGTCTCCATG...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTGGGCCGACCGCCCCCTaGAGTCGGAGACCGAAAAGA +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFGPTAP*SRRPKR
Trigger: TCTTTTCGGTCTCCGACTGCAGGGGGCGGTCGGCCC...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR CCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCATCTGTGATGCCCTGCTaGCGATGGCTGCTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSSVMPC*RWLLES
Trigger: AGACTCCAGCAGCCATCGCCAGCAGGGCATCACAGA...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAAAGCAAGGCATCCCATaGAGACCTCCCCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSKQGIP*RPPLQV
Trigger: GACCTGCAGGGGAGGTCTCCATGGGATGCCTTGCTT...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTTTGCTCCCCAGCCCCTaGCTTGGGTCACCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFLLPSP*LGSPGL
Trigger: CAGCCCTGGTGACCCAAGCCAGGGGCTGGGGAGCAA...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR TCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTCTCAGGGTCTTCTGGTaGCCTGCTGCTTTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSLRVFW*PAAFAS
Trigger: GGAGGCAAAAGCAGCAGGTCACCAGAAGACCCTGAG...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCATGCCGCCTTCGGCTTTaGCAGTCAGCTTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSCRLRL*QSASSG
Trigger: TCCAGAAGAAGCTGACTGGCAAAGCCGAAGGCGGCA...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGGCCGGATGCCAAGCTTaGAGTGGCACAGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKAGCQA*SGTEAG
Trigger: GCCTGCTTCTGTGCCACTGCAAGCTTGGCATCCGGC...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTCCTGCTGGCGATGGCTaGTGGAGTCTCCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSPAGDG*WSLLLV
Trigger: AACAAGCAGGAGACTCCAGCAGCCATCGCCAGCAGG...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTAGGCACCCTCTTTCCTaGATCCACAGGGCCGACCGC +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFRHPLS*IHRADR
Trigger: GCGGTCGGCCCTGTGGATGCAGGAAAGAGGGTGCCT...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR CCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAGCTGGCGATGGCTGCTaGAGTCTCCTGCTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSAGDGC*SLLLVL
Trigger: CAAAACAAGCAGGAGACTCCAGCAGCCATCGCCAGC...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGATGCCCTGCTGGCGATaGCTGCTGGAGTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKMPCWR*LLESPA
Trigger: AGCAGGAGACTCCAGCAGCCATCGCCAGCAGGGCAT...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTAAGCAAGGCATCCCATaGAGACCTCCCCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSKQGIP*RPPLQV
Trigger: GACCTGCAGGGGAGGTCTCCATGGGATGCCTTGCTT...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCATGCAATTTCACTTCCTaGTGGCTCCAGGAGCGCGAT +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSCNFTS*WLQERD
Trigger: ATCGCGCTCCTGGAGCCAGCAGGAAGTGAAATTGCA...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGTCATCTGTGATGCCCTaGTGGCGATGGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKSSVMP*WRWLLE
Trigger: CTCCAGCAGCCATCGCCAGCAGGGCATCACAGATGA...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTATGCCAAGCTTGCAGTaGCACAGAAGCAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSMPSLQ*HRSRHS
Trigger: GCTGTGCCTGCTTCTGTGCCACTGCAAGCTTGGCAT...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTCACAGCAGGAATAGGTaGCAGCTTCTCCCGCCAATT +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSHSRNR*QLLPPI
Trigger: AATTGGCGGGAGAAGCTGTCACCTATTCCTGCTGTG...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAGTGACCTGCTGCTTTTaGCTCCCTTCTCAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSVTCCF*LPSQKQ
Trigger: TTGCTTCTGAGAAGGGAGGCAAAAGCAGCAGGTCAC...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTCTTCTGGTGACCTGCTaGTTTTGCCTCCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSLLVTC*FCLPSQ
Trigger: CTGAGAAGGGAGGCAAAAGCAGCAGGTCACCAGAAG...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTGGTCTTCTGGTGACCTaGTGCTTTTGCCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSGLLVT*CFCLPS
Trigger: AGAAGGGAGGCAAAAGCAGCAGGTCACCAGAAGACC...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTGCAATGGTCTCAGATTaGTCCCCAGCCCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFAMVSD*SPAPGL
Trigger: CAAGCCAGGGGCTGGGGAGCAATCTGAGACCATTGC...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR CCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTAATTTCACTTCCTGCTaGCTCCAGGAGCGCGATTGC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSNFTSC*LQERDC
Trigger: GCAATCGCGCTCCTGGAGCCAGCAGGAAGTGAAATT...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGATGCCAAGCTTGCAGTaGCACAGAAGCAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKMPSLQ*HRSRHS
Trigger: GCTGTGCCTGCTTCTGTGCCACTGCAAGCTTGGCAT...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGGCTGGCGATGGCTGCTaGAGTCTCCTGCTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKAGDGC*SLLLVL
Trigger: CAAAACAAGCAGGAGACTCCAGCAGCCATCGCCAGC...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTACAGCCCAGCCGCAATaGTCTCAGATTGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFTAQPQ*SQIAPQ
Trigger: CTGGGGAGCAATCTGAGACCATTGCGGCTGGGCTGT...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR TCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGCACAGCAGGAATAGGTaGCAGCTTCTCCCGCCAATT +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKHSRNR*QLLPPI
Trigger: AATTGGCGGGAGAAGCTGTCACCTATTCCTGCTGTG...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAGTCTCCTGCTTGTTTTaGGATCATCTCTTTTGCCGG +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSVSCLF*DHLFCR
Trigger: CCGGCAAAAGAGATGATCTCAAAACAAGCAGGAGAC...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGGGTCTTCTGGTGACCTaGTGCTTTTGCCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKGLLVT*CFCLPS
Trigger: AGAAGGGAGGCAAAAGCAGCAGGTCACCAGAAGACC...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCATATAGGCAACTACAGTaGGAAGCGCTGATATGCTCC +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSYRQLQ*EALICS
Trigger: GGAGCATATCAGCGCTTCCCACTGTAGTTGCCTATA...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTGGCATCCTCCCGCCGTaGCAACGGTTTCTATGTACA +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFGILPP*QRFLCT
Trigger: TGTACATAGAAACCGTTGCCACGGCGGGAGGATGCC...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR CCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTACTAACGCGAAAAGCTaGGTCTCTCCCACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFTNAKS*VSPTEA
Trigger: TGCCTCGGTGGGAGAGACCCAGCTTTTCGCGTTAGT...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR TCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCATACAGTGGGAAGCGCTaGTATGCTCCTGGTATAATA +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSYSGKR*YAPGII
Trigger: TATTATACCAGGAGCATATCAGCGCTTCCCACTGTA...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTGCCCTGTTACAATCTTaGATGCAGCCACTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSALLQS*MQPLQF
Trigger: AAACTGCAGTGGCTGCATTCAAGATTGTAACAGGGC...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTGTCTCCTGCTTGTTTTaGGATCATCTCTTTTGCCGG +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSVSCLF*DHLFCR
Trigger: CCGGCAAAAGAGATGATCTCAAAACAAGCAGGAGAC...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAGAAATTCCTTCACTTTaGCCCAGTCAACAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSEIPSL*PSQQRS
Trigger: GCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATTTC...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGATCTCTTTTGCCGGATaGCAAGCTTGCAGTGGCACA +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKISFAG*QACSGT
Trigger: TGTGCCACTGCAAGCTTGGCATCCGGCAAAAGAGAT...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGGTGACCTGCTGCTTTTaGCTCCCTTCTCAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKVTCCF*LPSQKQ
Trigger: TTGCTTCTGAGAAGGGAGGCAAAAGCAGCAGGTCAC...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTAGCTCCAGTTCAAACTaGTCGGGCCTACTAACGCGA +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFSSSSN*SGLLTR
Trigger: TCGCGTTAGTAGGCCCGAGCAGTTTGAACTGGAGCT...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR CCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTGGCTGCTGTTGCTGCTaGTTTATCTTTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSGCCCC*FIFPQS
Trigger: GCTTTGAGGAAAGATAAACCAGCAGCAACAGCAGCC...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTATAGGCAACTACAGTaGGAAGCGCTGATATGCTCC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSYRQLQ*EALICS
Trigger: GGAGCATATCAGCGCTTCCCACTGTAGTTGCCTATA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTCTGTCATTTGCTAGCTaGAGTCCACAGTCTATCTGC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSLSFAS*SPQSIC
Trigger: GCAGATAGACTGTGGACTCCAGCTAGCAAATGACAG...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGATGAAGACAGCTGTTTaGACCACGAACTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKMKTAV*TTNWRQ
Trigger: TTGCCTCCAGTTCGTGGTTCAAACAGCTGTCTTCAT...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTCTTTTCCCTTTGGTTTaGGTCTCAGATGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSLFPLV*VSDAAS
Trigger: TGAAGCTGCATCTGAGACTCAAACCAAAGGGAAAAG...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCATTCATAGAGAATGGATaGAGTTCCAGAGCCCTGTTA +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSFIENG*SSRALL
Trigger: TAACAGGGCTCTGGAACTTCATCCATTCTCTATGAA...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAAATCTTTTGGTGCAGTaGTGGCTAAAAGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSNLLVQ*WLKDVH
Trigger: GTGCACATCTTTTAGCCATCACTGCACCAAAAGATT...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCATTTTCAGAGACTGAATaGGGAGAAGGAATGTATCCC +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSFSETE*GEGMYP
Trigger: GGGATACATTCCTTCTCCTCATTCAGTCTCTGAAAA...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTGAAATTCCTTCACTTTaGCCCAGTCAACAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSEIPSL*PSQQRS
Trigger: GCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATTTC...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTACTGGCTGCTGTTGCTaGTGGTTTATCTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSTGCCC*WFIFPQ
Trigger: TTGAGGAAAGATAAACCAGCAGCAACAGCAGCCAGT...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAAAAACTGGCTGCTGTTaGTGCTGGTTTATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSKTGCC*CWFIFP
Trigger: AGGAAAGATAAACCAGCAGCAACAGCAGCCAGTTTT...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCACTTGAATGCAGCCACTaGAGTTTCCTTCTTTTAGGT +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSLECSH*SFLLLG
Trigger: ACCTAAAAGAAGGAAACTGCAGTGGCTGCATTCAAG...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTATCACAGTCCTGCTTTaGTTCTTCAAACTGGCACAG +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSITVLL*FFKLAQ
Trigger: CTGTGCCAGTTTGAAGAAGCAAAGCAGGACTGTGAT...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGGGCTGCTGTTGCTGCTaGTTTATCTTTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKGCCCC*FIFPQS
Trigger: GCTTTGAGGAAAGATAAACCAGCAGCAACAGCAGCC...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAGCGCTGATATGCTCCTaGTATAATACATCACTGCTT +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSALICS*YNTSLL
Trigger: AAGCAGTGATGTATTATACCAGGAGCATATCAGCGC...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGTCCAAAGCCCCACAATaGTGGATAATCTTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKSKAPQ*WIIFGG
Trigger: ACCACCAAAGATTATCCATCATTGTGGGGCTTTGGA...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTATGAAGACAGCTGTTTaGACCACGAACTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFMKTAV*TTNWRQ
Trigger: TTGCCTCCAGTTCGTGGTTCAAACAGCTGTCTTCAT...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR TCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTTTTCCTTGCCTACATaGAGACAGCTGTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSFSLPT*RQLFEP
Trigger: TGGTTCAAACAGCTGTCTTCATGTAGGCAAGGAAAA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGCTTTTCCCTTTGGTTTaGGTCTCAGATGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKLFPLV*VSDAAS
Trigger: TGAAGCTGCATCTGAGACTCAAACCAAAGGGAAAAG...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTAATCTTTTGGTGCAGTaGTGGCTAAAAGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSNLLVQ*WLKDVH
Trigger: GTGCACATCTTTTAGCCATCACTGCACCAAAAGATT...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTTTTCAGAGACTGAATaGGGAGAAGGAATGTATCCC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSFSETE*GEGMYP
Trigger: GGGATACATTCCTTCTCCTCATTCAGTCTCTGAAAA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTAAAACTGGCTGCTGTTaGTGCTGGTTTATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSKTGCC*CWFIFP
Trigger: AGGAAAGATAAACCAGCAGCAACAGCAGCCAGTTTT...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTGGGAAGCGCTGATATaGTCCTGGTATAATACATCA +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSWEALI*SWYNTS
Trigger: TGATGTATTATACCAGGAGCATATCAGCGCTTCCCA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGATCACAGTCCTGCTTTaGTTCTTCAAACTGGCACAG +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKITVLL*FFKLAQ
Trigger: CTGTGCCAGTTTGAAGAAGCAAAGCAGGACTGTGAT...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTGGCTGCTGTTGCTGCTaGTTTATCTTTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFGCCCC*FIFPQS
Trigger: GCTTTGAGGAAAGATAAACCAGCAGCAACAGCAGCC...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR CCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTTATAGGCAACTACAGTaGGAAGCGCTGATATGCTCC +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFYRQLQ*EALICS
Trigger: GGAGCATATCAGCGCTTCCCACTGTAGTTGCCTATA...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR CCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCACTGACAAGGTTTTCTTaGCCAAATCATTATCAGGCT +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSLTRFS*PNHYQA
Trigger: AGCCTGATAATGATTTGGCCAAGAAAACCTTGTCAG...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTTCCAAAGCCCCACAATaGTGGATAATCTTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFSKAPQ*WIIFGG
Trigger: ACCACCAAAGATTATCCATCATTGTGGGGCTTTGGA...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR TCA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCATTCTTCATAATCTCCTaGGTTGAAAGCTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSFFIIS*VESFIS
Trigger: GGAAATGAAGCTTTCAACTCAGGAGATTATGAAGAA...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTTACAGTGGGAAGCGCTaGTATGCTCCTGGTATAATA +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFYSGKR*YAPGII
Trigger: TATTATACCAGGAGCATATCAGCGCTTCCCACTGTA...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR TCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCCAGTTCTGTAATTTaGTTTCTGCTTGAGCTCGAT +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSSSSVI*FLLELD
Trigger: ATCGAGCTCAAGCAGAAATCAAATTACAGAACTGGA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTACCTTTTCACAATCCTaGAAAGCACTATTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSTFSQS*KALFQF
Trigger: GAACTGGAATAGTGCTTTTCAGGATTGTGAAAAGGT...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTCTTTTCCCTTTGGTTTaGGTCTCAGATGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFLFPLV*VSDAAS
Trigger: TGAAGCTGCATCTGAGACTCAAACCAAAGGGAAAAG...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR TCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTCCTTCATTCACCTCTTaGATCTCAATTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSPSFTS*ISIFLL
Trigger: GAGAAGGAAAATTGAGATTCAAGAGGTGAATGAAGG...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTACTGGCTGCTGTTGCTaGTGGTTTATCTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFTGCCC*WFIFPQ
Trigger: TTGAGGAAAGATAAACCAGCAGCAACAGCAGCCAGT...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR GCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGTGGGAAGCGCTGATATaGTCCTGGTATAATACATCA +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKWEALI*SWYNTS
Trigger: TGATGTATTATACCAGGAGCATATCAGCGCTTCCCA...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGCTTGAATGCAGCCACTaGAGTTTCCTTCTTTTAGGT +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKLECSH*SFLLLG
Trigger: ACCTAAAAGAAGGAAACTGCAGTGGCTGCATTCAAG...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR GCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTGTTACAATCTTGAATaGAGCCACTGCAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSCYNLE*SHCSFL
Trigger: AAGGAAACTGCAGTGGCTGCATTCAAGATTGTAACA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGGCGCTGATATGCTCCTaGTATAATACATCACTGCTT +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKALICS*YNTSLL
Trigger: AAGCAGTGATGTATTATACCAGGAGCATATCAGCGC...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTCTGACAAGGTTTTCTTaGCCAAATCATTATCAGGCT +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSLTRFS*PNHYQA
Trigger: AGCCTGATAATGATTTGGCCAAGAAAACCTTGTCAG...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGAGTAAAATGGTTGTTTaGTGTGTCCGAAAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKSKMVV*CVRKVL
Trigger: GAGGACCTTTCGGACACACCAAACAACCATTTTACT...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGTCCAGTTCTGTAATTTaGTTTCTGCTTGAGCTCGAT +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKSSSVI*FLLELD
Trigger: ATCGAGCTCAAGCAGAAATCAAATTACAGAACTGGA...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTATTCGCTGTATTTACTaGGGGCGTCTTTATAGTTTT +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSIRCIY*GRLYSF
Trigger: AAAACTATAAAGACGCCCTCAGTAAATACAGCGAAT...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTTTTCTGATAATTCTTaGGTCCTTTATGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSFSDNS*VLYEPE
Trigger: CTCTGGCTCATAAAGGACTCAAGAATTATCAGAAAA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGAGGTATAAAAGATGCTaGTACACCAATGAGGGATCT +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKRYKRC*YTNEGS
Trigger: AGATCCCTCATTGGTGTATCAGCATCTTTTATACCT...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTAGCGAAACTGGCTTGTaGATTTACAAGGCAAAGCTA +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFSETGL*IYKAKL
Trigger: TAGCTTTGCCTTGTAAATTCACAAGCCAGTTTCGCT...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR GCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTAAAACTGGCTGCTGTTaGTGCTGGTTTATCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFKTGCC*CWFIFP
Trigger: AGGAAAGATAAACCAGCAGCAACAGCAGCCAGTTTT...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR GCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTTGGGAAGCGCTGATATaGTCCTGGTATAATACATCA +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFWEALI*SWYNTS
Trigger: TGATGTATTATACCAGGAGCATATCAGCGCTTCCCA...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR GCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGTGTTACAATCTTGAATaGAGCCACTGCAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKCYNLE*SHCSFL
Trigger: AAGGAAACTGCAGTGGCTGCATTCAAGATTGTAACA...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTTCCAGTTCTGTAATTTaGTTTCTGCTTGAGCTCGAT +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFSSSVI*FLLELD
Trigger: ATCGAGCTCAAGCAGAAATCAAATTACAGAACTGGA...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR TCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTACCTTTTCACAATCCTaGAAAGCACTATTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFTFSQS*KALFQF
Trigger: GAACTGGAATAGTGCTTTTCAGGATTGTGAAAAGGT...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR TCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGGAGTTTTCTATTTCCTaGATAACCATCCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKEFSIS*ITILFP
Trigger: AGGGAAAAGGATGGTTATTCAGGAAATAGAAAACTC...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGATTCGCTGTATTTACTaGGGGCGTCTTTATAGTTTT +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKIRCIY*GRLYSF
Trigger: AAAACTATAAAGACGCCCTCAGTAAATACAGCGAAT...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGTTTTCTGATAATTCTTaGGTCCTTTATGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKFSDNS*VLYEPE
Trigger: CTCTGGCTCATAAAGGACTCAAGAATTATCAGAAAA...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR TCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGATGCTGATACACCAATaGGGGATCTTTTTCAATAAG +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKMLIHQ*GIFFNK
Trigger: CTTATTGAAAAAGATCCCTCATTGGTGTATCAGCAT...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTCTGACAAGGTTTTCTTaGCCAAATCATTATCAGGCT +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFLTRFS*PNHYQA
Trigger: AGCCTGATAATGATTTGGCCAAGAAAACCTTGTCAG...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR CCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTAAAGATGAGCGAAACTaGCTTGTGAATTTACAAGGC +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFKDERN*LVNLQG
Trigger: GCCTTGTAAATTCACAAGCCAGTTTCGCTCATCTTT...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR TCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTTTCTTCATAATCTCCTaGGTTGAAAGCTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFFFIIS*VESFIS
Trigger: GGAAATGAAGCTTTCAACTCAGGAGATTATGAAGAA...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR TCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTGAGTTTTCTATTTCCTaGATAACCATCCTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFEFSIS*ITILFP
Trigger: AGGGAAAAGGATGGTTATTCAGGAAATAGAAAACTC...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR TCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTTACCCATACCTGTTTTaGAACCAACACATTTGTTTG +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFYPYLF*NQHICL
Trigger: CAAACAAATGTGTTGGTTTCAAAACAGGTATGGGTA...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR GCA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGGCCAAGTTTTATCCATaGAACTCTTTTACAATACCA +
Preference number: 4 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKAKFYP*NSFTIP
Trigger: TGGTATTGTAAAAGAGTTGCATGGATAAAACTTGGC...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CCA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTTTTTTGGCATATAAATaGGGCTACCCATACCTGTTT +
Preference number: 4 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFFLAYK*GYPYLF
Trigger: AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAA...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
36% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS GCA 90 bp AGCGCCCCGCGTCGGGGAAGTCGCGGCCGCCGCACCGGCTCTGGCTaGACTGCAGGTGCTGAGGGAGGGTCTCGTCGCCCGGCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: SAPRRGSRGRRTGSG*TAGAEGGSRRPARA
Trigger: GGCTCGGGCCGGGCGACGAGACCCTCCCTCAGCACCTGCAGTGCAGCCAGAGCCGGTGCGGCGGCCGCGACTTCCCCGACGCGGGGCGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520643.5
CDS CCA 90 bp CCGGCCGCCTCGGCGAACTGCCCGCTTCGGAACAGCTCGTTGCCCTaGCTCTTCAGGCCGGCAGGGTTCTCCGCGCCCTGCCCGCCGCCC +
Preference number: 5 (lower is better)
Translates to: PAASANCPLRNSSLP*LFRPAGFSAPCPPP
Trigger: GGGCGGCGGGCAGGGCGCGGAGAACCCTGCCGGCCTGAAGAGCCAGGGCAACGAGCTGTTCCGAAGCGGGCAGTTCGCCGAGGCGGCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS TCA 90 bp GGGAAGTCGCGGCCGCCGCACCGGCTCTGGCTGCACTGCAGGTGCTaGGGGAGGGTCTCGTCGCCCGGCCCGAGCCAGAGGCGACAGGCT +
Preference number: 5 (lower is better)
Translates to: GKSRPPHRLWLHCRC*GRVSSPGPSQRRQA
Trigger: AGCCTGTCGCCTCTGGCTCGGGCCGGGCGACGAGACCCTCCCTCAGCACCTGCAGTGCAGCCAGAGCCGGTGCGGCGGCCGCGACTTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520643.5
CDS GCA 90 bp ACTTGCCGGCCGCCTCGGCGAACTGCCCGCTTCGGAACAGCTCGTTaGCCTGGCTCTTCAGGCCGGCAGGGTTCTCCGCGCCCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: TCRPPRRTARFGTAR*PGSSGRQGSPRPAR
Trigger: GCGGGCAGGGCGCGGAGAACCCTGCCGGCCTGAAGAGCCAGGGCAACGAGCTGTTCCGAAGCGGGCAGTTCGCCGAGGCGGCCGGCAAGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS CCA 90 bp CTTGCCGGCCGCTTGCCGCCTTCGGCTTTGCCAGTCAGCTTCTTCTaGATGTTGCCCATGACGCACGGCTGGGCGGCGCGCGCGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LAGRLPPSALPVSFF*MLPMTHGWAARAAP
Trigger: GGGAGCCGCGCGCGCCGCCCAGCCGTGCGTCATGGGCAACATCCAGAAGAAGCTGACTGGCAAAGCCGAAGGCGGCAAGCGGCCGGCAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS GCA 90 bp AGGAGCGCGATTGCCGCCGAGTACTTGCCGGCCGCCTCGGCGAACTaGCCGCTTCGGAACAGCTCGTTGCCCTGGCTCTTCAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: RSAIAAEYLPAASAN*PLRNSSLPWLFRPA
Trigger: TGCCGGCCTGAAGAGCCAGGGCAACGAGCTGTTCCGAAGCGGGCAGTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAATCGCGCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS CCA 90 bp ACAGCCCAGCCGCAATGGTCTCAGATTGCTCCCCAGCCCCTGGCTTaGGTCACCAGGGCTGACCGCGCCGGTGGACCCGGGAACTCCAGC +
Preference number: 5 (lower is better)
Translates to: TAQPQWSQIAPQPLA*VTRADRAGGPGNSS
Trigger: GCTGGAGTTCCCGGGTCCACCGGCGCGGTCAGCCCTGGTGACCCAAGCCAGGGGCTGGGGAGCAATCTGAGACCATTGCGGCTGGGCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS CCA 90 bp GCTTTGCCAGTCAGCTTCTTCTGGATGTTGCCCATGACGCACGGCTaGGCGGCGCGCGCGGCTCCCGCCGGCTCCGCGGGCTTCTTATCT +
Preference number: 5 (lower is better)
Translates to: ALPVSFFWMLPMTHG*AARAAPAGSAGFLS
Trigger: AGATAAGAAGCCCGCGGAGCCGGCGGGAGCCGCGCGCGCCGCCCAGCCGTGCGTCATGGGCAACATCCAGAAGAAGCTGACTGGCAAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS GCA 90 bp CTTGATAGCCTGCTGGCTCCAGGAGCGCGATTGCCGCCGAGTACTTaGCGGCCGCCTCGGCGAACTGCCCGCTTCGGAACAGCTCGTTGC +
Preference number: 5 (lower is better)
Translates to: LDSLLAPGARLPPST*RPPRRTARFGTARC
Trigger: GCAACGAGCTGTTCCGAAGCGGGCAGTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAATCGCGCTCCTGGAGCCAGCAGGCTATCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523302.1
CDS GCA 90 bp TTTCACTTCCTGCTGGCTCCAGGAGCGCGATTGCCGCCGAGTACTTaGCGGCCGCCTCGGCGAACTGCCCGCTTCGGAACAGCTCGTTGC +
Preference number: 5 (lower is better)
Translates to: FHFLLAPGARLPPST*RPPRRTARFGTARC
Trigger: GCAACGAGCTGTTCCGAAGCGGGCAGTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAATCGCGCTCCTGGAGCCAGCAGGAAGTGAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS GCA 90 bp CACCGAGGCACCCTCTTTCCTGCATCCACAGGGCCGACCGCCCCCTaGAGTCGGAGACCGAAAAGAAACGGCATCCTCCCGCCGTGGCAA +
Preference number: 5 (lower is better)
Translates to: HRGTLFPASTGPTAP*SRRPKRNGILPPWQ
Trigger: TTGCCACGGCGGGAGGATGCCGTTTCTTTTCGGTCTCCGACTGCAGGGGGCGGTCGGCCCTGTGGATGCAGGAAAGAGGGTGCCTCGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS CCA 90 bp GTGGCAACGGTTTCTATGTACAGCGGCGCCAGGACCTGCCGGGACTaGGGAGCCCCACAGCCCAGCCGCAATGGTCTCAGATTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: VATVSMYSGARTCRD*GAPQPSRNGLRLLP
Trigger: GGGGAGCAATCTGAGACCATTGCGGCTGGGCTGTGGGGCTCCCCAGTCCCGGCAGGTCCTGGCGCCGCTGTACATAGAAACCGTTGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS CCA 90 bp GCCCCCTGCAGTCGGAGACCGAAAAGAAACGGCATCCTCCCGCCGTaGCAACGGTTTCTATGTACAGCGGCGCCAGGACCTGCCGGGACT +
Preference number: 5 (lower is better)
Translates to: APCSRRPKRNGILPP*QRFLCTAAPGPAGT
Trigger: AGTCCCGGCAGGTCCTGGCGCCGCTGTACATAGAAACCGTTGCCACGGCGGGAGGATGCCGTTTCTTTTCGGTCTCCGACTGCAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS GCA 90 bp TGGCTATCGGAAGTTTCTCAGGGTCTTCTGGTGACCTGCTGCTTTTaGCTCCCTTCTCAGAAGCAAGGCATCCCATGGAGACCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: WLSEVSQGLLVTCCF*LPSQKQGIPWRPPL
Trigger: CAGGGGAGGTCTCCATGGGATGCCTTGCTTCTGAGAAGGGAGGCAAAAGCAGCAGGTCACCAGAAGACCCTGAGAAACTTCCGATAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS TCA 90 bp TGTGATGCCCTGCTGGCGATGGCTGCTGGAGTCTCCTGCTTGTTTTaGGATCATCTCTTTTGCCGGATGCCAAGCTTGCAGTGGCACAGA +
Preference number: 5 (lower is better)
Translates to: CDALLAMAAGVSCLF*DHLFCRMPSLQWHR
Trigger: TCTGTGCCACTGCAAGCTTGGCATCCGGCAAAAGAGATGATCTCAAAACAAGCAGGAGACTCCAGCAGCCATCGCCAGCAGGGCATCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS GCA 90 bp ATGGCAGTGCCACCCGAAGTCATGCTGGCGGTTCATCCAGTGGCTTaGCTGAAGGTAAATCTAGTGCCACCAAGTGGTCCAAAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: MAVPPEVMLAVHPVA*LKVNLVPPSGPKKQ
Trigger: TTGCTTCTTTGGACCACTTGGTGGCACTAGATTTACCTTCAGGCAAGCCACTGGATGAACCGCCAGCATGACTTCGGGTGGCACTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519409.1
CDS-3UTR CAA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCACCCCTTGCCGGCCGCTaGCCGCCTTCGGCTTTGCCA +
Preference number: 5 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSPLAGR*PPSALP
Trigger: TGGCAAAGCCGAAGGCGGCAAGCGGCCGGCAAGGGG...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS GCA 90 bp CTGCTGGAGTCTCCTGCTTGTTTTGAGATCATCTCTTTTGCCGGATaGCAAGCTTGCAGTGGCACAGAAGCAGGCACAGCAGGAATAGGT +
Preference number: 5 (lower is better)
Translates to: LLESPACFEIISFAG*QACSGTEAGTAGIG
Trigger: ACCTATTCCTGCTGTGCCTGCTTCTGTGCCACTGCAAGCTTGGCATCCGGCAAAAGAGATGATCTCAAAACAAGCAGGAGACTCCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTCCCCTTGCCGGCCGCTaGCCGCCTTCGGCTTTGCCA +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSPLAGR*PPSALP
Trigger: TGGCAAAGCCGAAGGCGGCAAGCGGCCGGCAAGGGG...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAGCTCCAGGAGCGCGATaGCCGCCGAGTACTTGCCGG +
Preference number: 5 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSAPGAR*PPSTCR
Trigger: CCGGCAAGTACTCGGCGGCAATCGCGCTCCTGGAGC...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS TCA 90 bp GGCATTATTAGGCTTGGCTATCGGAAGTTTCTCAGGGTCTTCTGGTaGCCTGCTGCTTTTGCCTCCCTTCTCAGAAGCAAGGCATCCCAT +
Preference number: 5 (lower is better)
Translates to: GIIRLGYRKFLRVFW*PAAFASLLRSKASH
Trigger: ATGGGATGCCTTGCTTCTGAGAAGGGAGGCAAAAGCAGCAGGTCACCAGAAGACCCTGAGAAACTTCCGATAGCCAAGCCTAATAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS GCA 90 bp TCTCCTGCTTGTTTTGAGATCATCTCTTTTGCCGGATGCCAAGCTTaGAGTGGCACAGAAGCAGGCACAGCAGGAATAGGTGACAGCTTC +
Preference number: 5 (lower is better)
Translates to: SPACFEIISFAGCQA*SGTEAGTAGIGDSF
Trigger: GAAGCTGTCACCTATTCCTGCTGTGCCTGCTTCTGTGCCACTGCAAGCTTGGCATCCGGCAAAAGAGATGATCTCAAAACAAGCAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTATTGCCGCCGAGTACTaGCCGGCCGCCTCGGCGAAC +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSIAAEY*PAASAN
Trigger: GTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAAT...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTGCTCCAGGAGCGCGATaGCCGCCGAGTACTTGCCGG +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSAPGAR*PPSTCR
Trigger: CCGGCAAGTACTCGGCGGCAATCGCGCTCCTGGAGC...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGATTGCCGCCGAGTACTaGCCGGCCGCCTCGGCGAAC +
Preference number: 5 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKIAAEY*PAASAN
Trigger: GTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAAT...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTCTTCGGAACAGCTCGTaGCCCTGGCTCTTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSLRNSS*PWLFRP
Trigger: CGGCCTGAAGAGCCAGGGCAACGAGCTGTTCCGAAG...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAAGCTTCTTCTGGATGTaGCCCATGACGCACGGCTGG +
Preference number: 5 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSSFFWM*PMTHGW
Trigger: CCAGCCGTGCGTCATGGGCAACATCCAGAAGAAGCT...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGCTTCGGAACAGCTCGTaGCCCTGGCTCTTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKLRNSS*PWLFRP
Trigger: CGGCCTGAAGAGCCAGGGCAACGAGCTGTTCCGAAG...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTGCCGGATGCCAAGCTaGCAGTGGCACAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSCRMPS*QWHRSR
Trigger: CCTGCTTCTGTGCCACTGCAAGCTTGGCATCCGGCA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTTGCCGCCTTCGGCTTaGCCAGTCAGCTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSLPPSA*PVSFFW
Trigger: CCAGAAGAAGCTGACTGGCAAAGCCGAAGGCGGCAA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGTGCCGGATGCCAAGCTaGCAGTGGCACAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKCRMPS*QWHRSR
Trigger: CCTGCTTCTGTGCCACTGCAAGCTTGGCATCCGGCA...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGAGCTTCTTCTGGATGTaGCCCATGACGCACGGCTGG +
Preference number: 5 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKSFFWM*PMTHGW
Trigger: CCAGCCGTGCGTCATGGGCAACATCCAGAAGAAGCT...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGTTGCCGCCTTCGGCTTaGCCAGTCAGCTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKLPPSA*PVSFFW
Trigger: CCAGAAGAAGCTGACTGGCAAAGCCGAAGGCGGCAA...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTGGTGACCTGCTGCTTTaGCCTCCCTTCTCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSGDLLL*PPFSEA
Trigger: TGCTTCTGAGAAGGGAGGCAAAAGCAGCAGGTCACC...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTCGCAATGGTCTCAGATaGCTCCCCAGCCCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFRNGLR*LPSPWL
Trigger: AAGCCAGGGGCTGGGGAGCAATCTGAGACCATTGCG...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTGCTTCTCCCGCCAATTaGGTCCATCCAGCTCCATTA +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSASPAN*VHPAPL
Trigger: TAATGGAGCTGGATGGACCAAATTGGCGGGAGAAGC...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGGGTGACCTGCTGCTTTaGCCTCCCTTCTCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKGDLLL*PPFSEA
Trigger: TGCTTCTGAGAAGGGAGGCAAAAGCAGCAGGTCACC...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTCATGAAGACAGCTGTTaGAACCACGAACTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSHEDSC*NHELEA
Trigger: TGCCTCCAGTTCGTGGTTCAAACAGCTGTCTTCATG...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAAGCCCTGTTACAATCTaGAATGCAGCCACTGCAGTT +
Preference number: 5 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSSPVTI*NAATAV
Trigger: AACTGCAGTGGCTGCATTCAAGATTGTAACAGGGCT...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTTGAGATCATCTCTTTaGCCGGATGCCAAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSLRSSL*PDAKLA
Trigger: TGCAAGCTTGGCATCCGGCAAAAGAGATGATCTCAA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTGATCACAGTCCTGCTTaGCTTCTTCAAACTGGCACA +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSDHSPA*LLQTGT
Trigger: TGTGCCAGTTTGAAGAAGCAAAGCAGGACTGTGATC...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAAGCTCCTTTTGGCCCTaGCTAATTAGTGTCAACATC +
Preference number: 5 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSSSFWP*LISVNI
Trigger: GATGTTGACACTAATTAGCAAGGGCCAAAAGGAGCT...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTCATGAAGACAGCTGTTaGAACCACGAACTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFHEDSC*NHELEA
Trigger: TGCCTCCAGTTCGTGGTTCAAACAGCTGTCTTCATG...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR CAA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCATCTGACAAGGTTTTCTaGGCCAAATCATTATCAGGC +
Preference number: 5 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSSDKVF*AKSLSG
Trigger: GCCTGATAATGATTTGGCCAAGAAAACCTTGTCAGA...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTAGTCTCCTGCTTGTTTaGAGATCATCTCTTTTGCCG +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSSLLLV*RSSLLP
Trigger: CGGCAAAAGAGATGATCTCAAAACAAGCAGGAGACT...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGGATCACAGTCCTGCTTaGCTTCTTCAAACTGGCACA +
Preference number: 5 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKDHSPA*LLQTGT
Trigger: TGTGCCAGTTTGAAGAAGCAAAGCAGGACTGTGATC...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTAGCTCCTTTTGGCCCTaGCTAATTAGTGTCAACATC +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSSSFWP*LISVNI
Trigger: GATGTTGACACTAATTAGCAAGGGCCAAAAGGAGCT...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS CCA 90 bp AGCTCATACTGCCTTTTTAGGGCCTGTATATCTTCTAAAGTAAAATaGTTGTTTGGTGTGTCCGAAAGGTCCTCAAACAGCTGTTCAATT +
Preference number: 5 (lower is better)
Translates to: SSYCLFRACISSKVK*LFGVSERSSNSCSI
Trigger: AATTGAACAGCTGTTTGAGGACCTTTCGGACACACCAAACAACCATTTTACTTTAGAAGATATACAGGCCCTAAAAAGGCAGTATGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGTTCAGGGGCCAAGGCTaGAAGATGCTTTTCACAAAA +
Preference number: 5 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKFRGQG*KMLFTK
Trigger: TTTTGTGAAAAGCATCTTCAAGCCTTGGCCCCTGAA...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCATTCCCGGAGCTTGTTTaGATGTTTATATGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSFPELV*MFICSS
Trigger: GCTACTACATATAAACATCAAAACAAGCTCCGGGAA...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp TCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCAAACAGAGAGCTCTGTTaGTATATATGGCACATTCCT +
Preference number: 5 (lower is better)
Translates to: SFTLTQSTKELSTCMSSSNRELC*YIWHIP
Trigger: AGGAATGTGCCATATATACAAACAGAGCTCTCTGTT...TGAAGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS TCA 90 bp TGCTCCTGGTATAATACATCACTGCTTCTTCATAATCTCCTGAGTTaGAAGCTTCATTTCCTTTCTCCTTTTCACGAGTGGCAAGAAAAT +
Preference number: 5 (lower is better)
Translates to: CSWYNTSLLLHNLLS*KLHFLSPFHEWQEN
Trigger: ATTTTCTTGCCACTCGTGAAAAGGAGAAAGGAAATGAAGCTTTCAACTCAGGAGATTATGAAGAAGCAGTGATGTATTATACCAGGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000520508.5
ENST00000520643.5
CDS TCA 90 bp AGACCTTTTCACAATCCTGAAAAGCACTATTCCAGTTCTGTAATTTaGTTTCTGCTTGAGCTCGATTGTTATAGGCAACTACAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: RPFHNPEKHYSSSVI*FLLELDCYRQLQWE
Trigger: TTCCCACTGTAGTTGCCTATAACAATCGAGCTCAAGCAGAAATCAAATTACAGAACTGGAATAGTGCTTTTCAGGATTGTGAAAAGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000520508.5
ENST00000520643.5
CDS TCA 90 bp ATGTCTGTTGCTATACCACTGCGGTTTCCATTGAAACTTAACATTTaGTTCAATTATGGCACTGGGCATACAACCGCAAACAAAATACAG +
Preference number: 5 (lower is better)
Translates to: MSVAIPLRFPLKLNI*FNYGTGHTTANKIQ
Trigger: CTGTATTTTGTTTGCGGTTGTATGCCCAGTGCCATAATTGAATCAAATGTTAAGTTTCAATGGAAACCGCAGTGGTATAGCAACAGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519424.1
CDS-3UTR CAA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTTTCAGGGGCCAAGGCTaGAAGATGCTTTTCACAAAA +
Preference number: 5 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFFRGQG*KMLFTK
Trigger: TTTTGTGAAAAGCATCTTCAAGCCTTGGCCCCTGAA...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTTCCCGGAGCTTGTTTaGATGTTTATATGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSFPELV*MFICSS
Trigger: GCTACTACATATAAACATCAAAACAAGCTCCGGGAA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGTCTGACAAGGTTTTCTaGGCCAAATCATTATCAGGC +
Preference number: 5 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKSDKVF*AKSLSG
Trigger: GCCTGATAATGATTTGGCCAAGAAAACCTTGTCAGA...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTCTAAAGTAAAATGGTaGTTTGGTGTGTCCGAAAGG +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSSKVKW*FGVSER
Trigger: CCTTTCGGACACACCAAACAACCATTTTACTTTAGA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS TCA 90 bp TGGTCTTTTAGAATATTTTTCCTTGCCTACATGAAGACAGCTGTTTaGACCACGAACTGGAGGCAAATTATCTTTCATTGCTGGAAATGT +
Preference number: 5 (lower is better)
Translates to: WSFRIFFLAYMKTAV*TTNWRQIIFHCWKC
Trigger: ACATTTCCAGCAATGAAAGATAATTTGCCTCCAGTTCGTGGTTCAAACAGCTGTCTTCATGTAGGCAAGGAAAAATATTCTAAAAGACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000520508.5
ENST00000520643.5
CDS-3UTR CAA 90 bp AATTCCTTCACTTTGACCCAGTCAACAAAGGAGCTTTCAACATGTATGAGTTCTTTAGACAAGTGTGACTaGTCTATTACCGTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: NSFTLTQSTKELSTCMSSLDKCD*SITVFS
Trigger: AGAAAAGACGGTAATAGACAAGTCACACTTGTCTAA...AGAACTCATACATGTTGAAAGCTCCTTTGTTGACTGGGTCAAAGTGAAGGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTTCTGACAAGGTTTTCTaGGCCAAATCATTATCAGGC +
Preference number: 5 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFSDKVF*AKSLSG
Trigger: GCCTGATAATGATTTGGCCAAGAAAACCTTGTCAGA...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR CAA 90 bp CTCTTTTACAATACCATCTCATTAACATTCCTGGAACACATACATGCATGGAAGTCTAAAGTAAAATGGTaGTTTGGTGTGTCCGAAAGG +
Preference number: 5 (lower is better)
Translates to: LFYNTISLTFLEHIHAWKSKVKW*FGVSER
Trigger: CCTTTCGGACACACCAAACAACCATTTTACTTTAGA...CTTCCATGCATGTATGTGTTCCAGGAATGTTAATGAGATGGTATTGTAAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS-3UTR CAA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTTTCCCGGAGCTTGTTTaGATGTTTATATGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFFPELV*MFICSS
Trigger: GCTACTACATATAAACATCAAAACAAGCTCCGGGAA...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR CAA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTCTACCCATACCTGTTTaGAAACCAACACATTTGTTT +
Preference number: 5 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFLPIPV*KPTHLF
Trigger: AAACAAATGTGTTGGTTTCAAAACAGGTATGGGTAG...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS-3UTR CAA 90 bp TTTCTAGTAATACGTTCATTTTTGGCATATAAATGGGGCTACCCATACCTGTTTGTAATACGTTCATTTTaGGCATATAAATGGGGCTAC +
Preference number: 5 (lower is better)
Translates to: FLVIRSFLAYKWGYPYLFVIRSF*AYKWGY
Trigger: GTAGCCCCATTTATATGCCAAAAATGAACGTATTAC...AAACAGGTATGGGTAGCCCCATTTATATGCCAAAAATGAACGTATTACTAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS TCA 72 bp CGGCCGCCGCACCGGCTCTGGCTGCACTGCAGGTGCTaGGGGAGGGTCTCGTCGCCCGGCCCGAGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: RPPHRLWLHCRC*GRVSSPGPSQR
Trigger: CCTCTGGCTCGGGCCGGGCGACGAGACCCTCCCTCAGCACCTGCAGTGCAGCCAGAGCCGGTGCGGCGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520643.5
CDS GCA 72 bp CGTCGGGGAAGTCGCGGCCGCCGCACCGGCTCTGGCTaGACTGCAGGTGCTGAGGGAGGGTCTCGTCGCCCG +
Preference number: 6 (lower is better)
Translates to: RRGSRGRRTGSG*TAGAEGGSRRP
Trigger: CGGGCGACGAGACCCTCCCTCAGCACCTGCAGTGCAGCCAGAGCCGGTGCGGCGGCCGCGACTTCCCCGACG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520643.5
CDS CAA 90 bp GGCCGCTTGCCGCCTTCGGCTTTGCCAGTCAGCTTCTTCTGGATGTaGCCCATGACGCACGGCTGGGCGGCGCGCGCGGCTCCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: GRLPPSALPVSFFWM*PMTHGWAARAAPAG
Trigger: GCCGGCGGGAGCCGCGCGCGCCGCCCAGCCGTGCGTCATGGGCAACATCCAGAAGAAGCTGACTGGCAAAGCCGAAGGCGGCAAGCGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS CAA 72 bp GTCTGGCCCCGCTGCGGCGCGCCCCTTGCCGGCCGCTaGCCGCCTTCGGCTTTGCCAGTCAGCTTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: VWPRCGAPLAGR*PPSALPVSFFW
Trigger: CCAGAAGAAGCTGACTGGCAAAGCCGAAGGCGGCAAGCGGCCGGCAAGGGGCGCGCCGCAGCGGGGCCAGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS CAA 90 bp TACTTGCCGGCCGCCTCGGCGAACTGCCCGCTTCGGAACAGCTCGTaGCCCTGGCTCTTCAGGCCGGCAGGGTTCTCCGCGCCCTGCCCG +
Preference number: 6 (lower is better)
Translates to: YLPAASANCPLRNSS*PWLFRPAGFSAPCP
Trigger: CGGGCAGGGCGCGGAGAACCCTGCCGGCCTGAAGAGCCAGGGCAACGAGCTGTTCCGAAGCGGGCAGTTCGCCGAGGCGGCCGGCAAGTA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS GCA 72 bp TCTGGCCCCGCTGCGGCGCGCCCCTTGCCGGCCGCTTaGCGCCTTCGGCTTTGCCAGTCAGCTTCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: SGPAAARPLPAA*RLRLCQSASSG
Trigger: TCCAGAAGAAGCTGACTGGCAAAGCCGAAGGCGGCAAGCGGCCGGCAAGGGGCGCGCCGCAGCGGGGCCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS GCA 72 bp CCGCCTCGGCGAACTGCCCGCTTCGGAACAGCTCGTTaGCCTGGCTCTTCAGGCCGGCAGGGTTCTCCGCGC +
Preference number: 6 (lower is better)
Translates to: PPRRTARFGTAR*PGSSGRQGSPR
Trigger: GCGCGGAGAACCCTGCCGGCCTGAAGAGCCAGGGCAACGAGCTGTTCCGAAGCGGGCAGTTCGCCGAGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS GCA 72 bp GCCCCTGCCACGCCCCGACCCGCAGTCCGGCAGATCTaGAGATCTGCCGACGGCCACAGGTTCACCTTCCCC +
Preference number: 6 (lower is better)
Translates to: APATPRPAVRQI*RSADGHRFTFP
Trigger: GGGGAAGGTGAACCTGTGGCCGTCGGCAGATCTGCAGATCTGCCGGACTGCGGGTCGGGGCGTGGCAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520643.5
CDS CCA 72 bp CCGCAATGGTCTCAGATTGCTCCCCAGCCCCTGGCTTaGGTCACCAGGGCTGACCGCGCCGGTGGACCCGGG +
Preference number: 6 (lower is better)
Translates to: PQWSQIAPQPLA*VTRADRAGGPG
Trigger: CCCGGGTCCACCGGCGCGGTCAGCCCTGGTGACCCAAGCCAGGGGCTGGGGAGCAATCTGAGACCATTGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS CAA 72 bp GCCGCCTCGGCGAACTGCCCGCTTCGGAACAGCTCGTaGCCCTGGCTCTTCAGGCCGGCAGGGTTCTCCGCG +
Preference number: 6 (lower is better)
Translates to: AASANCPLRNSS*PWLFRPAGFSA
Trigger: CGCGGAGAACCCTGCCGGCCTGAAGAGCCAGGGCAACGAGCTGTTCCGAAGCGGGCAGTTCGCCGAGGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS CAA 72 bp CCTGCTGGCTCCAGGAGCGCGATTGCCGCCGAGTACTaGCCGGCCGCCTCGGCGAACTGCCCGCTTCGGAAC +
Preference number: 6 (lower is better)
Translates to: PAGSRSAIAAEY*PAASANCPLRN
Trigger: GTTCCGAAGCGGGCAGTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAATCGCGCTCCTGGAGCCAGCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS CAA 90 bp CCCCGCTGCGGCGCGCCCCTTGCCGGCCGCTTGCCGCCTTCGGCTTaGCCAGTCAGCTTCTTCTGGATGTTGCCCATGACGCACGGCTGG +
Preference number: 6 (lower is better)
Translates to: PRCGAPLAGRLPPSA*PVSFFWMLPMTHGW
Trigger: CCAGCCGTGCGTCATGGGCAACATCCAGAAGAAGCTGACTGGCAAAGCCGAAGGCGGCAAGCGGCCGGCAAGGGGCGCGCCGCAGCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS GCA 72 bp CTGCTGGCTCCAGGAGCGCGATTGCCGCCGAGTACTTaGCGGCCGCCTCGGCGAACTGCCCGCTTCGGAACA +
Preference number: 6 (lower is better)
Translates to: LLAPGARLPPST*RPPRRTARFGT
Trigger: TGTTCCGAAGCGGGCAGTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAATCGCGCTCCTGGAGCCAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS GCA 72 bp CACGCCCCGACCCGCAGTCCGGCAGATCTGCAGATCTaGCGACGGCCACAGGTTCACCTTCCCCGCCTTCAC +
Preference number: 6 (lower is better)
Translates to: HAPTRSPADLQI*RRPQVHLPRLH
Trigger: GTGAAGGCGGGGAAGGTGAACCTGTGGCCGTCGGCAGATCTGCAGATCTGCCGGACTGCGGGTCGGGGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520643.5
CDS GCA 72 bp ATTGCCGCCGAGTACTTGCCGGCCGCCTCGGCGAACTaGCCGCTTCGGAACAGCTCGTTGCCCTGGCTCTTC +
Preference number: 6 (lower is better)
Translates to: IAAEYLPAASAN*PLRNSSLPWLF
Trigger: GAAGAGCCAGGGCAACGAGCTGTTCCGAAGCGGGCAGTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS CAA 72 bp GGCGCGCCCCTTGCCGGCCGCTTGCCGCCTTCGGCTTaGCCAGTCAGCTTCTTCTGGATGTTGCCCATGACG +
Preference number: 6 (lower is better)
Translates to: GAPLAGRLPPSA*PVSFFWMLPMT
Trigger: CGTCATGGGCAACATCCAGAAGAAGCTGACTGGCAAAGCCGAAGGCGGCAAGCGGCCGGCAAGGGGCGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS CCA 72 bp GTTTCTATGTACAGCGGCGCCAGGACCTGCCGGGACTaGGGAGCCCCACAGCCCAGCCGCAATGGTCTCAGA +
Preference number: 6 (lower is better)
Translates to: VSMYSGARTCRD*GAPQPSRNGLR
Trigger: TCTGAGACCATTGCGGCTGGGCTGTGGGGCTCCCCAGTCCCGGCAGGTCCTGGCGCCGCTGTACATAGAAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS CAA 90 bp ATTTCACTTCCTGCTGGCTCCAGGAGCGCGATTGCCGCCGAGTACTaGCCGGCCGCCTCGGCGAACTGCCCGCTTCGGAACAGCTCGTTG +
Preference number: 6 (lower is better)
Translates to: ISLPAGSRSAIAAEY*PAASANCPLRNSSL
Trigger: CAACGAGCTGTTCCGAAGCGGGCAGTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAATCGCGCTCCTGGAGCCAGCAGGAAGTGAAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS GCA 72 bp TGCAATTTCACTTCCTGCTGGCTCCAGGAGCGCGATTaGCGCCGAGTACTTGCCGGCCGCCTCGGCGAACTG +
Preference number: 6 (lower is better)
Translates to: CNFTSCWLQERD*RRVLAGRLGEL
Trigger: CAGTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAATCGCGCTCCTGGAGCCAGCAGGAAGTGAAATTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS GCA 72 bp ACCCTCTTTCCTGCATCCACAGGGCCGACCGCCCCCTaGAGTCGGAGACCGAAAAGAAACGGCATCCTCCCG +
Preference number: 6 (lower is better)
Translates to: TLFPASTGPTAP*SRRPKRNGILP
Trigger: CGGGAGGATGCCGTTTCTTTTCGGTCTCCGACTGCAGGGGGCGGTCGGCCCTGTGGATGCAGGAAAGAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS CAA 72 bp CTGCAATTTCACTTCCTGCTGGCTCCAGGAGCGCGATaGCCGCCGAGTACTTGCCGGCCGCCTCGGCGAACT +
Preference number: 6 (lower is better)
Translates to: LQFHFLLAPGAR*PPSTCRPPRRT
Trigger: AGTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAATCGCGCTCCTGGAGCCAGCAGGAAGTGAAATTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS GCA 72 bp AAATTCTTGATAGCCTGCTGGCTCCAGGAGCGCGATTaGCGCCGAGTACTTGCCGGCCGCCTCGGCGAACTG +
Preference number: 6 (lower is better)
Translates to: KFLIACWLQERD*RRVLAGRLGEL
Trigger: CAGTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAATCGCGCTCCTGGAGCCAGCAGGCTATCAAGAATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523302.1
CDS CAA 72 bp AAAATTCTTGATAGCCTGCTGGCTCCAGGAGCGCGATaGCCGCCGAGTACTTGCCGGCCGCCTCGGCGAACT +
Preference number: 6 (lower is better)
Translates to: KILDSLLAPGAR*PPSTCRPPRRT
Trigger: AGTTCGCCGAGGCGGCCGGCAAGTACTCGGCGGCAATCGCGCTCCTGGAGCCAGCAGGCTATCAAGAATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523302.1
CDS CCA 72 bp AGTCGGAGACCGAAAAGAAACGGCATCCTCCCGCCGTaGCAACGGTTTCTATGTACAGCGGCGCCAGGACCT +
Preference number: 6 (lower is better)
Translates to: SRRPKRNGILPP*QRFLCTAAPGP
Trigger: AGGTCCTGGCGCCGCTGTACATAGAAACCGTTGCCACGGCGGGAGGATGCCGTTTCTTTTCGGTCTCCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS CCA 72 bp CAGTTCAAACTGCTCGGGCCTACTAACGCGAAAAGCTaGGTCTCTCCCACCGAGGCACCCTCTTTCCTGCAT +
Preference number: 6 (lower is better)
Translates to: QFKLLGPTNAKS*VSPTEAPSFLH
Trigger: ATGCAGGAAAGAGGGTGCCTCGGTGGGAGAGACCCAGCTTTTCGCGTTAGTAGGCCCGAGCAGTTTGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520508.5
CDS CAA 72 bp GCCACCCGAAGTCATGCTGGCGGTTCATCCAGTGGCTaGCCTGAAGGTAAATCTAGTGCCACCAAGTGGTCC +
Preference number: 6 (lower is better)
Translates to: ATRSHAGGSSSG*PEGKSSATKWS
Trigger: GGACCACTTGGTGGCACTAGATTTACCTTCAGGCAAGCCACTGGATGAACCGCCAGCATGACTTCGGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519409.1
CDS CAA 90 bp GGCGATGGCTGCTGGAGTCTCCTGCTTGTTTTGAGATCATCTCTTTaGCCGGATGCCAAGCTTGCAGTGGCACAGAAGCAGGCACAGCAG +
Preference number: 6 (lower is better)
Translates to: GDGCWSLLLVLRSSL*PDAKLAVAQKQAQQ
Trigger: CTGCTGTGCCTGCTTCTGTGCCACTGCAAGCTTGGCATCCGGCAAAAGAGATGATCTCAAAACAAGCAGGAGACTCCAGCAGCCATCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS TCA 72 bp TTGCAGTGGCACAGAAGCAGGCACAGCAGGAATAGGTaGCAGCTTCTCCCGCCAATTTGGTCCATCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LQWHRSRHSRNR*QLLPPIWSIQL
Trigger: GAGCTGGATGGACCAAATTGGCGGGAGAAGCTGTCACCTATTCCTGCTGTGCCTGCTTCTGTGCCACTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS GCA 72 bp CCACCCGAAGTCATGCTGGCGGTTCATCCAGTGGCTTaGCTGAAGGTAAATCTAGTGCCACCAAGTGGTCCA +
Preference number: 6 (lower is better)
Translates to: PPEVMLAVHPVA*LKVNLVPPSGP
Trigger: TGGACCACTTGGTGGCACTAGATTTACCTTCAGGCAAGCCACTGGATGAACCGCCAGCATGACTTCGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519409.1
CDS CAA 90 bp TTGGCTATCGGAAGTTTCTCAGGGTCTTCTGGTGACCTGCTGCTTTaGCCTCCCTTCTCAGAAGCAAGGCATCCCATGGAGACCTCCCCT +
Preference number: 6 (lower is better)
Translates to: LAIGSFSGSSGDLLL*PPFSEARHPMETSP
Trigger: AGGGGAGGTCTCCATGGGATGCCTTGCTTCTGAGAAGGGAGGCAAAAGCAGCAGGTCACCAGAAGACCCTGAGAAACTTCCGATAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS CAA 90 bp GATGGCAGTGCCACCCGAAGTCATGCTGGCGGTTCATCCAGTGGCTaGCCTGAAGGTAAATCTAGTGCCACCAAGTGGTCCAAAGAAGCA +
Preference number: 6 (lower is better)
Translates to: DGSATRSHAGGSSSG*PEGKSSATKWSKEA
Trigger: TGCTTCTTTGGACCACTTGGTGGCACTAGATTTACCTTCAGGCAAGCCACTGGATGAACCGCCAGCATGACTTCGGGTGGCACTGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519409.1
CDS TCA 72 bp CTGCTGGCGATGGCTGCTGGAGTCTCCTGCTTGTTTTaGGATCATCTCTTTTGCCGGATGCCAAGCTTGCAG +
Preference number: 6 (lower is better)
Translates to: LLAMAAGVSCLF*DHLFCRMPSLQ
Trigger: CTGCAAGCTTGGCATCCGGCAAAAGAGATGATCTCAAAACAAGCAGGAGACTCCAGCAGCCATCGCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS CAA 72 bp CCTGCTGGCGATGGCTGCTGGAGTCTCCTGCTTGTTTaGAGATCATCTCTTTTGCCGGATGCCAAGCTTGCA +
Preference number: 6 (lower is better)
Translates to: PAGDGCWSLLLV*RSSLLPDAKLA
Trigger: TGCAAGCTTGGCATCCGGCAAAAGAGATGATCTCAAAACAAGCAGGAGACTCCAGCAGCCATCGCCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS CAA 72 bp GGAAGTTTCTCAGGGTCTTCTGGTGACCTGCTGCTTTaGCCTCCCTTCTCAGAAGCAAGGCATCCCATGGAG +
Preference number: 6 (lower is better)
Translates to: GSFSGSSGDLLL*PPFSEARHPME
Trigger: CTCCATGGGATGCCTTGCTTCTGAGAAGGGAGGCAAAAGCAGCAGGTCACCAGAAGACCCTGAGAAACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS GCA 72 bp GAAGTTTCTCAGGGTCTTCTGGTGACCTGCTGCTTTTaGCTCCCTTCTCAGAAGCAAGGCATCCCATGGAGA +
Preference number: 6 (lower is better)
Translates to: EVSQGLLVTCCF*LPSQKQGIPWR
Trigger: TCTCCATGGGATGCCTTGCTTCTGAGAAGGGAGGCAAAAGCAGCAGGTCACCAGAAGACCCTGAGAAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS GCA 72 bp CTATCGGAAGTTTCTCAGGGTCTTCTGGTGACCTGCTaGTTTTGCCTCCCTTCTCAGAAGCAAGGCATCCCA +
Preference number: 6 (lower is better)
Translates to: LSEVSQGLLVTC*FCLPSQKQGIP
Trigger: TGGGATGCCTTGCTTCTGAGAAGGGAGGCAAAAGCAGCAGGTCACCAGAAGACCCTGAGAAACTTCCGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS GCA 72 bp TCTCCTGCTTGTTTTGAGATCATCTCTTTTGCCGGATaGCAAGCTTGCAGTGGCACAGAAGCAGGCACAGCA +
Preference number: 6 (lower is better)
Translates to: SPACFEIISFAG*QACSGTEAGTA
Trigger: TGCTGTGCCTGCTTCTGTGCCACTGCAAGCTTGGCATCCGGCAAAAGAGATGATCTCAAAACAAGCAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS CAA 72 bp TGCTGGAGTCTCCTGCTTGTTTTGAGATCATCTCTTTaGCCGGATGCCAAGCTTGCAGTGGCACAGAAGCAG +
Preference number: 6 (lower is better)
Translates to: CWSLLLVLRSSL*PDAKLAVAQKQ
Trigger: CTGCTTCTGTGCCACTGCAAGCTTGGCATCCGGCAAAAGAGATGATCTCAAAACAAGCAGGAGACTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS GCA 72 bp TGTTTTGAGATCATCTCTTTTGCCGGATGCCAAGCTTaGAGTGGCACAGAAGCAGGCACAGCAGGAATAGGT +
Preference number: 6 (lower is better)
Translates to: CFEIISFAGCQA*SGTEAGTAGIG
Trigger: ACCTATTCCTGCTGTGCCTGCTTCTGTGCCACTGCAAGCTTGGCATCCGGCAAAAGAGATGATCTCAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000523302.1
CDS CCA 72 bp CCATTCTTCAGCTGTAAAACTGGCTGCTGTTGCTGCTaGTTTATCTTTCCTCAAAGCTCTGCTTTCAGGGGC +
Preference number: 6 (lower is better)
Translates to: PFFSCKTGCCCC*FIFPQSSAFRG
Trigger: GCCCCTGAAAGCAGAGCTTTGAGGAAAGATAAACCAGCAGCAACAGCAGCCAGTTTTACAGCTGAAGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000520508.5
ENST00000520643.5
CDS TCA 72 bp TTACTCAAATCTTCTGTAGCTTCCCGGAGCTTGTTTTaGTGTTTATATGTAGTAGCACGACGCAGAAGAGCC +
Preference number: 6 (lower is better)
Translates to: LLKSSVASRSLF*CLYVVARRRRA
Trigger: GGCTCTTCTGCGTCGTGCTACTACATATAAACATCAAAACAAGCTCCGGGAAGCTACAGAAGATTTGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000520508.5
ENST00000520643.5
CDS CCA 72 bp TTTCTGCTTGAGCTCGATTGTTATAGGCAACTACAGTaGGAAGCGCTGATATGCTCCTGGTATAATACATCA +
Preference number: 6 (lower is better)
Translates to: FLLELDCYRQLQ*EALICSWYNTS
Trigger: TGATGTATTATACCAGGAGCATATCAGCGCTTCCCACTGTAGTTGCCTATAACAATCGAGCTCAAGCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251809.4
ENST00000388798.7
ENST00000520508.5
ENST00000520643.5
CDS TCA 72 bp GCTATACCACTGCGGTTTCCATTGAAACTTAACATTTaGTTCAATTATGGCACTGGGCATACAACCGCAAAC +
Preference number: 6 (lower is better)
Translates to: AIPLRFPLKLNI*FNYGTGHTTAN
Trigger: GTTTGCGGTTGTATGCCCAGTGCCATAATTGAATCAAATGTTAAGTTTCAATGGAAACCGCAGTGGTATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519424.1
CDS CCA 72 bp CTTCAAACTGGCACAGCTTCAAGTAACAGAGAGCTCTaGCATAATGCAATGGAACTCAGTATTATGAAAGGT +
Preference number: 6 (lower is better)
Translates to: LQTGTASSNREL*HNAMELSIMKG
Trigger: ACCTTTCATAATACTGAGTTCCATTGCATTATGCCAGAGCTCTCTGTTACTTGAAGCTGTGCCAGTTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519424.1
CDS CAA 90 bp TCCGAAAGGTCCTCAAACAGCTGTTCAATTAGCTCCTTTTGGCCCTaGCTAATTAGTGTCAACATCATCTTAAACCTTTCTGCTTTACTC +
Preference number: 6 (lower is better)
Translates to: SERSSNSCSISSFWP*LISVNIILNLSALL
Trigger: GAGTAAAGCAGAAAGGTTTAAGATGATGTTGACACTAATTAGCAAGGGCCAAAAGGAGCTAATTGAACAGCTGTTTGAGGACCTTTCGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS CAA 72 bp TCCTCAAACAGCTGTTCAATTAGCTCCTTTTGGCCCTaGCTAATTAGTGTCAACATCATCTTAAACCTTTCT +
Preference number: 6 (lower is better)
Translates to: SSNSCSISSFWP*LISVNIILNLS
Trigger: AGAAAGGTTTAAGATGATGTTGACACTAATTAGCAAGGGCCAAAAGGAGCTAATTGAACAGCTGTTTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251809.4
ENST00000388798.7
CDS TCA 72 bp AGCTGTATTAAGAAAAAGATGAGCGAAACTGGCTTGTaGATTTACAAGGCAAAGCTAGAAAAACTGATAGAT +
Preference number: 6 (lower is better)
Translates to: SCIKKKMSETGL*IYKAKLEKLID
Trigger: ATCTATCAGTTTTTCTAGCTTTGCCTTGTAAATTCACAAGCCAGTTTCGCTCATCTTTTTCTTAATACAGCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000520508.5
ENST00000520643.5