RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SPACA9 (Homo sapiens)

Ensembl gene IDs: ENSG00000165698

Ensembl transcript IDs: ENST00000350499.6, ENST00000356311.10, ENST00000372136.7

Found 304 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCAAGGAGCAGATGGTCTCCAGCTTGATCACCCTCTGCAAAACTaGAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGG +
Preference number: 1 (lower is better)
Translates to: GQGADGLQLDHPLQN*SPQQGQAWHWSRMW
Trigger: CCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTTTTGCAGAGGGTGATCAAGCTGGAGACCATCTGCTCCTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR GCA 90 bp TGGTGGTGGGGCAAGGAGCAGATGGTCTCCAGCTTGATCACCCTCTaGAAAACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCC +
Preference number: 1 (lower is better)
Translates to: WWWGKEQMVSSLITL*KTAARSRDRRGTGA
Trigger: GGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTTTTGCAGAGGGTGATCAAGCTGGAGACCATCTGCTCCTTGCCCCACCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR CCA 90 bp GGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTaGGGCTGGTGGTGGGGCAAGGAGCAGATGGTCTCCAGCTTGATC +
Preference number: 1 (lower is better)
Translates to: GEHPWLANSVCLAYS*GWWWGKEQMVSSLI
Trigger: GATCAAGCTGGAGACCATCTGCTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR CCA 90 bp CATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTaGTGGTGGGGCAAGGAGCAGATGGTCTCCAGCTTGATCACCCTC +
Preference number: 1 (lower is better)
Translates to: HPWLANSVCLAYSWG*WWGKEQMVSSLITL
Trigger: GAGGGTGATCAAGCTGGAGACCATCTGCTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR TCA 90 bp ACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAAGAGGACCTAGGTaGCAGTTCAGTGCCCTCCTGGGACCCTCTACCACACCATCCTGT +
Preference number: 1 (lower is better)
Translates to: TGVALEPDVAQRGPR*QFSALLGPSTTPSC
Trigger: ACAGGATGGTGTGGTAGAGGGTCCCAGGAGGGCACTGAACTGTCACCTAGGTCCTCTTTGAGCCACATCCGGCTCCAGTGCCACGCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR CCA 90 bp GACAGTTCAGTGCCCTCCTGGGACCCTCTACCACACCATCCTGTTTaGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCAGCACGGAGCC +
Preference number: 1 (lower is better)
Translates to: DSSVPSWDPLPHHPV*ATSVSGFPLHQHGA
Trigger: GGCTCCGTGCTGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAGGGCACTGAACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR CCA 90 bp CTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTaGGTTTCCTCTTCATCAGCACGGAGCCTGATGCTTAGAAGTGGA +
Preference number: 1 (lower is better)
Translates to: LGPSTTPSCLGNFCK*VSSSSARSLMLRSG
Trigger: TCCACTTCTAAGCATCAGGCTCCGTGCTGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR TCA 90 bp GCTTCTGTCATGGTCTCCCTCTCCCAAGTAAAGGCGAAGGAAAGGTaGGTTTATTCCCCTTTGGCTGTGGTCCAGAGAACTAAACACACT +
Preference number: 1 (lower is better)
Translates to: ASVMVSLSQVKAKER*VYSPLAVVQRTKHT
Trigger: AGTGTGTTTAGTTCTCTGGACCACAGCCAAAGGGGAATAAACTCACCTTTCCTTCGCCTTTACTTGGGAGAGGGAGACCATGACAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR CCA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTCAGCAGGGACAGGCGTaGCACTGGAGCCGGATGTGG +
Preference number: 2 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLQQGQA*HWSRMW
Trigger: CCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTG...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAAGGCAGGAGAATGGCGTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKGRRMA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCC...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGGCAGGAGAATGGCGTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: RGASLARKQRVPCLQLGLGRRMA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCC...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR CCA 90 bp GGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGGACAGGCGTGGCACTaGAGCCGGATGTGGCTCAAA +
Preference number: 2 (lower is better)
Translates to: GASLARKQRVPCLQLGLVGQAWH*SRMWLK
Trigger: TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCC...CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTAGGCGGAGGTTGCAGTaGGCCGAGGTTGCGCCACCG +
Preference number: 2 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVRRRLQ*AEVAPP
Trigger: CGGTGGCGCAACCTCGGCTCACTGCAACCTCCGCCT...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR GCA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGAGCTTGATCACCCTCTaGAAAACTGCAGCCCGCAGC +
Preference number: 2 (lower is better)
Translates to: RGASLARKQRVPCLQLGLSLITL*KTAARS
Trigger: GCTGCGGGCTGCAGTTTTGCAGAGGGTGATCAAGCT...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR GCA 90 bp GGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGAGCTTGATCACCCTCTaGAAAACTGCAGCCCGCAGC +
Preference number: 2 (lower is better)
Translates to: GASLARKQRVPCLQLGLVSLITL*KTAARS
Trigger: GCTGCGGGCTGCAGTTTTGCAGAGGGTGATCAAGCT...CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR CCA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGAGTTCAGTGCCCTCCTaGGACCCTCTACCACACCAT +
Preference number: 2 (lower is better)
Translates to: LANSVCLAYSWGWWWGKESSVPS*DPLPHH
Trigger: ATGGTGTGGTAGAGGGTCCCAGGAGGGCACTGAACT...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGCATCAGCACGGAGCCTaGTGCTTAGAAGTGGAAATG +
Preference number: 2 (lower is better)
Translates to: LANSVCLAYSWGWWWGKEHQHGA*CLEVEM
Trigger: CATTTCCACTTCTAAGCATCAGGCTCCGTGCTGATG...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp GGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGAGATGGTCTCCAGCTTaGTCACCCTCTGCAAAACTG +
Preference number: 2 (lower is better)
Translates to: GASLARKQRVPCLQLGLVRWSPA*SPSAKL
Trigger: CAGTTTTGCAGAGGGTGATCAAGCTGGAGACCATCT...CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR CCA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGCCACACCATCCTGTTTaGGCAACTTCTGTAAGTGGG +
Preference number: 2 (lower is better)
Translates to: RGASLARKQRVPCLQLGLPHHPV*ATSVSG
Trigger: CCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGG...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCACAAAGAGGACCTAGGTaGCAGTTCAGTGCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGAQRGPR*QFSALL
Trigger: CAGGAGGGCACTGAACTGTCACCTAGGTCCTCTTTG...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR GCA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCAAAACAGCGTGTGCCTTaGCTACAGTTGGGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGAKQRVP*LQLGLV
Trigger: CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTT...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR CCA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAAGGCAACTTCTGTAAGTaGGTTTCCTCTTCATCAGCA +
Preference number: 2 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKGNFCK*VSSSSA
Trigger: TGCTGATGAAGAGGAAACCCACTTACAGAAGTTGCC...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCACACGAGGGTAGATCATaGGGTCAGGAGATTGAGACC +
Preference number: 2 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGAHEGRS*GQEIET
Trigger: GGTCTCAATCTCCTGACCTCATGATCTACCCTCGTG...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAACAAAGAGGACCTAGGTaGCAGTTCAGTGCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKQRGPR*QFSALL
Trigger: CAGGAGGGCACTGAACTGTCACCTAGGTCCTCTTTG...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTAATACTTTTTATTCTTaGCTGTCTCCCCCTGAGGAA +
Preference number: 2 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLNTFYS*LSPPEE
Trigger: TTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATT...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAACACGAGGGTAGATCATaGGGTCAGGAGATTGAGACC +
Preference number: 2 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKHEGRS*GQEIET
Trigger: GGTCTCAATCTCCTGACCTCATGATCTACCCTCGTG...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCACATCAGCACGGAGCCTaGTGCTTAGAAGTGGAAATG +
Preference number: 2 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGAHQHGA*CLEVEM
Trigger: CATTTCCACTTCTAAGCATCAGGCTCCGTGCTGATG...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGAATACTTTTTATTCTTaGCTGTCTCCCCCTGAGGAA +
Preference number: 2 (lower is better)
Translates to: LANSVCLAYSWGWWWGKENTFYS*LSPPEE
Trigger: TTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATT...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAATTGACTGTCTCCCCCTaGGGAAGCAACAATAATACA +
Preference number: 2 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKLTVSP*GSNNNT
Trigger: TGTATTATTGTTGCTTCCTCAGGGGGAGACAGTCAA...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATGTCCATGGGTACCAGTaGAAAAAGGACCAACCAGTA +
Preference number: 2 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHVHGYQ*KKDQPV
Trigger: TACTGGTTGGTCCTTTTTTCACTGGTACCCATGGAC...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR TCA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCATTGACTGTCTCCCCCTaGGGAAGCAACAATAATACA +
Preference number: 2 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSLTVSP*GSNNNT
Trigger: TGTATTATTGTTGCTTCCTCAGGGGGAGACAGTCAA...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR CCA 72 bp CCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTaGGGCTGGTGGTGGGGCAAGGAGCAGATGGTCTCC +
Preference number: 3 (lower is better)
Translates to: PWLANSVCLAYS*GWWWGKEQMVS
Trigger: GGAGACCATCTGCTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR CCA 72 bp TGCCGACCCCCACTCCATCCTGGAGGGGAGCATCCCTaGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGG +
Preference number: 3 (lower is better)
Translates to: CRPPLHPGGEHP*LANSVCLAYSW
Trigger: CCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGGTCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR TCA 72 bp GCTGGTGGTGGGGCAAGGAGCAGATGGTCTCCAGCTTaGTCACCCTCTGCAAAACTGCAGCCCGCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: AGGGARSRWSPA*SPSAKLQPAAG
Trigger: CCCTGCTGCGGGCTGCAGTTTTGCAGAGGGTGATCAAGCTGGAGACCATCTGCTCCTTGCCCCACCACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR CCA 72 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTaGTGGTGGGGCAAGGAGCAGATGGTCTCCAGCTTG +
Preference number: 3 (lower is better)
Translates to: LANSVCLAYSWG*WWGKEQMVSSL
Trigger: CAAGCTGGAGACCATCTGCTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR CAA 90 bp GGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGTATTGGCTGATTCCCTaGGGGTTAGTAAGTGGCAGG +
Preference number: 3 (lower is better)
Translates to: GASLARKQRVPCLQLGLVYWLIP*GLVSGR
Trigger: CCTGCCACTTACTAACCCCAAGGGAATCAGCCAATA...CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR CAA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGACCACACCATCCTGTTaGGGCAACTTCTGTAAGTGG +
Preference number: 3 (lower is better)
Translates to: RGASLARKQRVPCLQLGLTTPSC*GNFCKW
Trigger: CCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGT...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR CAA 90 bp GGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGCAGATGGTCTCCAGCTaGATCACCCTCTGCAAAACT +
Preference number: 3 (lower is better)
Translates to: GASLARKQRVPCLQLGLVQMVSS*ITLCKT
Trigger: AGTTTTGCAGAGGGTGATCAAGCTGGAGACCATCTG...CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR CAA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAACAAACAGCGTGTGCCTaGCCTACAGTTGGGGCTGGT +
Preference number: 3 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKQTACA*PTVGAG
Trigger: ACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTG...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR CCA 72 bp CTCAAAGAGGACCTAGGTGACAGTTCAGTGCCCTCCTaGGACCCTCTACCACACCATCCTGTTTGGGCAACT +
Preference number: 3 (lower is better)
Translates to: LKEDLGDSSVPS*DPLPHHPVWAT
Trigger: AGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAGGGCACTGAACTGTCACCTAGGTCCTCTTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR CAA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGAGTCTCAGTAATATATaGGCTGATTCCCTTGGGGTT +
Preference number: 3 (lower is better)
Translates to: LANSVCLAYSWGWWWGKESLSNI*ADSLGV
Trigger: AACCCCAAGGGAATCAGCCAATATATTACTGAGACT...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR-3UTR CAA 90 bp GGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGAGTCTCAGTAATATATaGGCTGATTCCCTTGGGGTT +
Preference number: 3 (lower is better)
Translates to: GASLARKQRVPCLQLGLVSLSNI*ADSLGV
Trigger: AACCCCAAGGGAATCAGCCAATATATTACTGAGACT...CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR TCA 72 bp CCAGCACTTTGGGAGGCCGATCACGAGGGTAGATCATaGGGTCAGGAGATTGAGACCATCCTGGCTAACATG +
Preference number: 3 (lower is better)
Translates to: PALWEADHEGRS*GQEIETILANM
Trigger: CATGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATGATCTACCCTCGTGATCGGCCTCCCAAAGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR CCA 72 bp GTGCCCTCCTGGGACCCTCTACCACACCATCCTGTTTaGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCAG +
Preference number: 3 (lower is better)
Translates to: VPSWDPLPHHPV*ATSVSGFPLHQ
Trigger: CTGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAGGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR TCA 72 bp GACACATTTTACAATGTTTGGGGTTCGACTACGCTGTaGAAACCAGGTCATCGCCCTTGCTCAGGAGCCACA +
Preference number: 3 (lower is better)
Translates to: DTFYNVWGSTTL*KPGHRPCSGAT
Trigger: TGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCCCAAACATTGTAAAATGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR CCA 72 bp AGGCGAAGGAAAGGTGAGTTTATTCCCCTTTGGCTGTaGTCCAGAGAACTAAACACACTACTGAGTTCTGGC +
Preference number: 3 (lower is better)
Translates to: RRRKGEFIPLWL*SRELNTLLSSG
Trigger: GCCAGAACTCAGTAGTGTGTTTAGTTCTCTGGACCACAGCCAAAGGGGAATAAACTCACCTTTCCTTCGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR TCA 72 bp GTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTaGGGAAGCAACAATAATACAGAAGCTAAGTCGTCC +
Preference number: 3 (lower is better)
Translates to: VVEYFLFLTVSP*GSNNNTEAKSS
Trigger: GGACGACTTAGCTTCTGTATTATTGTTGCTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGAGCGGCTCCCCTGGTaGTCTCCTGGTGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLERLPW*SPGAPG
Trigger: CCCAGGCGCACCAGGAGAGCACCAGGGGAGCCGCTC...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAAAGGCGGAGGTTGCAGTaGGCCGAGGTTGCGCCACCG +
Preference number: 4 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKRRRLQ*AEVAPP
Trigger: CGGTGGCGCAACCTCGGCTCACTGCAACCTCCGCCT...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTTGGGCTGGGTCCCTATaGCCTGGGCAGGACGAGCGG +
Preference number: 4 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLWAGSL*PGQDER
Trigger: CCGCTCGTCCTGCCCAGGCCATAGGGACCCAGCCCA...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAATGGGCTGGGTCCCTATaGCCTGGGCAGGACGAGCGG +
Preference number: 4 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKWAGSL*PGQDER
Trigger: CCGCTCGTCCTGCCCAGGCCATAGGGACCCAGCCCA...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp GGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGAGGCGGAGGTTGCAGTaGGCCGAGGTTGCGCCACCG +
Preference number: 4 (lower is better)
Translates to: GASLARKQRVPCLQLGLVRRRLQ*AEVAPP
Trigger: CGGTGGCGCAACCTCGGCTCACTGCAACCTCCGCCT...CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp GGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGCGTGGGCGTTCTCCCTaGAGTGCTCCAGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GASLARKQRVPCLQLGLVRGRSP*SAPERR
Trigger: CCGCCGCTCTGGAGCACTGCAGGGAGAACGCCCACG...CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAACTGGTGCTCTCCTGGTaGGCCTGGGGCTCACTCACG +
Preference number: 4 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKLVLSW*AWGSLT
Trigger: CGTGAGTGAGCCCCAGGCGCACCAGGAGAGCACCAG...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTCTCTCCTGGTGCGCCTaGGGCTCACTCACGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLLSWCA*GSLTCC
Trigger: GCAGCACGTGAGTGAGCCCCAGGCGCACCAGGAGAG...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAACTCTCCTGGTGCGCCTaGGGCTCACTCACGTGCTGC +
Preference number: 4 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKLSWCA*GSLTCC
Trigger: GCAGCACGTGAGTGAGCCCCAGGCGCACCAGGAGAG...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGTGGGTCCCTATGGCCTaGGCAGGACGAGCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RGASLARKQRVPCLQLGLWVPMA*AGRAAP
Trigger: GGGAGCCGCTCGTCCTGCCCAGGCCATAGGGACCCA...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAAGCCGAGACGGCTACATaGACGCCACTATCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKAETAT*TPLSPR
Trigger: GCGGGGCGATAGTGGCGTCCATGTAGCCGTCTCGGC...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372136.7
CDS-3UTR GCA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGTGGGGCTCACTCACGTaGTGCAGCACCTTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: LANSVCLAYSWGWWWGKEWGSLT*CSTLRG
Trigger: GCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCCCCA...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGCTGGTGCTCTCCTGGTaGGCCTGGGGCTCACTCACG +
Preference number: 4 (lower is better)
Translates to: LANSVCLAYSWGWWWGKELVLSW*AWGSLT
Trigger: CGTGAGTGAGCCCCAGGCGCACCAGGAGAGCACCAG...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCAGTGACCGGACACCCCTaGCCGTCGCGACGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGAVTGHP*PSRRWR
Trigger: CCGCCAGCGTCGCGACGGGCAGGGGTGTCCGGTCAC...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372136.7
CDS-3UTR CCA 90 bp GGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGCAGCAGGGACAGGCGTaGCACTGGAGCCGGATGTGG +
Preference number: 4 (lower is better)
Translates to: GASLARKQRVPCLQLGLVQQGQA*HWSRMW
Trigger: CCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTG...CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAAGGAGGGGAGCATCCCTaGCTCGCAAACAGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKGGEHP*LANSVC
Trigger: GCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCC...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGGCGGGTGGACCAGTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLGGWTS*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAACTGGTCCACCCGCC...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTACTGGGGTGCCAGAGTaGACGGCCTCAAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLTGVPE*TASKCW
Trigger: CCAGCACTTTGAGGCCGTGCACTCTGGCACCCCAGT...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGGCTCACTCACGTGCTaGAGCACCTTGCGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: RGASLARKQRVPCLQLGLGSLTC*STLRGN
Trigger: GTTGCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCC...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAACTCGGGAGCCTCCACTaGGACGTCGGGTGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKLGSLH*DVGCAA
Trigger: GGCCGCGCACCCGACGTCGCAGTGGAGGCTCCCGAG...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372136.7
CDS-3UTR CCA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGGCCGGATCTTGTCGTaGGCGTTCTCCCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: RGASLARKQRVPCLQLGLGRILS*AFSLQC
Trigger: GCACTGCAGGGAGAACGCCCACGACAAGATCCGGCC...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGGACAGGCGTGGCACTaGAGCCGGATGTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLGQAWH*SRMWLK
Trigger: TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCC...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAACTCCGTGAGTGTCGGTaGCCCGGAGGGTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKLRECR*PGGWGG
Trigger: GCCTCCCCACCCTCCGGGGCACCGACACTCACGGAG...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356311.10
CDS-3UTR GCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAAGAGCGGCTCCCCTGGTaGTCTCCTGGTGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKERLPW*SPGAPG
Trigger: CCCAGGCGCACCAGGAGAGCACCAGGGGAGCCGCTC...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGAGGTTGTTGGTGACTaGGGTGCCAGAGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: RGASLARKQRVPCLQLGLEVVGD*GARVHG
Trigger: GCCGTGCACTCTGGCACCCCAGTCACCAACAACCTC...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAACACACTACTGAGTTCTaGCCAGGTGCCGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKHTTEF*PGAVAH
Trigger: GTGAGCCACGGCACCTGGCCAGAACTCAGTAGTGTG...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGGGGCCTCGTCACAGCTaGGGTGGTTCACCACATCAT +
Preference number: 4 (lower is better)
Translates to: LANSVCLAYSWGWWWGKEGPRHS*GGSPHH
Trigger: ATGATGTGGTGAACCACCTCAGCTGTGACGAGGCCC...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGACGCTGAGTTCCACATaGCGACCCCCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: LANSVCLAYSWGWWWGKETLSST*RPPLHP
Trigger: AGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGT...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGCACACTACTGAGTTCTaGCCAGGTGCCGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: RGASLARKQRVPCLQLGLHTTEF*PGAVAH
Trigger: GTGAGCCACGGCACCTGGCCAGAACTCAGTAGTGTG...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp GGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGCCTCCAGGGTGGTTTTaGACATCCCCTGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: GASLARKQRVPCLQLGLVPPGWF*TSPGFE
Trigger: CTCAAACCCAGGGGATGTTCAAAACCACCCTGGAGG...CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGGGTTCGACTACGCTGTaGAAACCAGGTCATCGCCCT +
Preference number: 4 (lower is better)
Translates to: LANSVCLAYSWGWWWGKEGSTTL*KPGHRP
Trigger: AGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACC...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CTTGGGCATGAGCCTCTTAGAAGCCGACTTGAGACAGGCATGCCCCCTTGCCTAGCGTTCTCCCTGCAGTaGTCCAGAGCGGCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LGHEPLRSRLETGMPPCLAFSLQ*SRAAVK
Trigger: CTTCACCGCCGCTCTGGAGCACTGCAGGGAGAACGC...TAGGCAAGGGGGCATGCCTGTCTCAAGTCGGCTTCTAAGAGGCTCATGCCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTCGTGGGCGTTCTCCCTaGAGTGCTCCAGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVRGRSP*SAPERR
Trigger: CCGCCGCTCTGGAGCACTGCAGGGAGAACGCCCACG...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGCACCTGTCCAATGCTaGAGATGGGCCGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: RGASLARKQRVPCLQLGLAPVQC*RWAGSC
Trigger: ACAAGATCCGGCCCATCTCCAGCATTGGACAGGTGC...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTCCCCTGGTGCTCTCCTaGTGCGCCTGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVPLVLS*CAWGSL
Trigger: GAGTGAGCCCCAGGCGCACCAGGAGAGCACCAGGGG...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGAGTTCAGTGCCCTCCTaGGACCCTCTACCACACCAT +
Preference number: 4 (lower is better)
Translates to: RGASLARKQRVPCLQLGLSSVPS*DPLPHH
Trigger: ATGGTGTGGTAGAGGGTCCCAGGAGGGCACTGAACT...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGAGGGTATTTTGCTCTaGGGCTGCTTAAGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLEGILL*GCLSRC
Trigger: GCAACGACTTAAGCAGCCTCAGAGCAAAATACCCTC...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp GGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGCACGAGGGTAGATCATaGGGTCAGGAGATTGAGACC +
Preference number: 4 (lower is better)
Translates to: GASLARKQRVPCLQLGLVHEGRS*GQEIET
Trigger: GGTCTCAATCTCCTGACCTCATGATCTACCCTCGTG...CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGCACGAGGGTAGATCATaGGGTCAGGAGATTGAGACC +
Preference number: 4 (lower is better)
Translates to: RGASLARKQRVPCLQLGLHEGRS*GQEIET
Trigger: GGTCTCAATCTCCTGACCTCATGATCTACCCTCGTG...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTCATCAGCACGGAGCCTaGTGCTTAGAAGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLHQHGA*CLEVEM
Trigger: CATTTCCACTTCTAAGCATCAGGCTCCGTGCTGATG...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAAAAGGTGAGCTGCTGCTaGTGGAAGAGCTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKKVSCC*WKSLYF
Trigger: GAAGTACAAGCTCTTCCAGCAGCAGCAGCTCACCTT...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGGTGAAGGTGAGCTGCTaGTGCTGGAAGAGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: LANSVCLAYSWGWWWGKEVKVSC*CWKSLY
Trigger: GTACAAGCTCTTCCAGCAGCAGCAGCTCACCTTCAC...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGTGCACGGCCTCAAAGTaGTGGCAGAGCTTATTCAGC +
Preference number: 4 (lower is better)
Translates to: RGASLARKQRVPCLQLGLCTASK*WQSLFS
Trigger: GCTGAATAAGCTCTGCCAGCACTTTGAGGCCGTGCA...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTACGGCCTCAAAGTGCTaGCAGAGCTTATTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLTASKC*QSLFSS
Trigger: AGAGCTGAATAAGCTCTGCCAGCACTTTGAGGCCGT...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAAGCCTACAGTTGGGGCTaGTGGTGGGGCAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKAYSWG*WWGKEQ
Trigger: CTGCTCCTTGCCCCACCACCAGCCCCAACTGTAGGC...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCACCAGAGAAGTTGGAGTaGCTCCGTGAGTGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGAPEKLE*LRECRC
Trigger: GCACCGACACTCACGGAGTCACTCCAACTTCTCTGG...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356311.10
CDS-3UTR TCA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGGAGGGTATTTTGCTCTaGGGCTGCTTAAGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: LANSVCLAYSWGWWWGKEEGILL*GCLSRC
Trigger: GCAACGACTTAAGCAGCCTCAGAGCAAAATACCCTC...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTTGGTTCACCACATCATaGGGGTATTTTGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLWFTTS*GYFALR
Trigger: CCTCAGAGCAAAATACCCTCATGATGTGGTGAACCA...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAAGGCGGGTGGACCAGTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKGGWTS*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAACTGGTCCACCCGCC...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCAGCGGTGAAGGTGAGCTaGTGCTGCTGGAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGAAVKVS*CCWKSL
Trigger: CAAGCTCTTCCAGCAGCAGCAGCTCACCTTCACCGC...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTGCGTTCTCCCTGCAGTaGTCCAGAGCGGCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVAFSLQ*SRAAVK
Trigger: CTTCACCGCCGCTCTGGAGCACTGCAGGGAGAACGC...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAACGTGCTGCAGCACCTTaGGCGGCAACTTCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKRAAAP*AATSRS
Trigger: ACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACG...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCACTCGCAAACAGCGTGTaGCTTGCCTACAGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGALANSV*LAYSWG
Trigger: GCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp CTTGGGCATGAGCCTCTTAGAAGCCGACTTGAGACAGGCATGCCCCCTTGCCTAGTCCAATGCTGGAGATaGGCCGGATCTTGTCGTGGG +
Preference number: 4 (lower is better)
Translates to: LGHEPLRSRLETGMPPCLVQCWR*AGSCRG
Trigger: CCCACGACAAGATCCGGCCCATCTCCAGCATTGGAC...TAGGCAAGGGGGCATGCCTGTCTCAAGTCGGCTTCTAAGAGGCTCATGCCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CCA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAAGGCAACTTCTCGGAGTaGGCGATCCATTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKGNFSE*AIHSFI
Trigger: AATGAAAGAATGGATCGCCCACTCCGAGAAGTTGCC...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAAGGACAGGCGTGGCACTaGAGCCGGATGTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKGQAWH*SRMWLK
Trigger: TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCC...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTCCAGGAGGTTGTTGGTaGCTGGGGTGCCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVPGGCW*LGCQSA
Trigger: TGCACTCTGGCACCCCAGTCACCAACAACCTCCTGG...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAAGGGCCTCGTCACAGCTaGGGTGGTTCACCACATCAT +
Preference number: 4 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKGPRHS*GGSPHH
Trigger: ATGATGTGGTGAACCACCTCAGCTGTGACGAGGCCC...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGGTCCATGGGTACCAGTaGAAAAAGGACCAACCAGTA +
Preference number: 4 (lower is better)
Translates to: LANSVCLAYSWGWWWGKEVHGYQ*KKDQPV
Trigger: TACTGGTTGGTCCTTTTTTCACTGGTACCCATGGAC...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp GGAGATGTAGGTTTTCTTTCAGGGATAAATCCCAGGAAACCAAGTCAGGCAGAGCTCCGTGAGTGTCGGTaGCCCGGAGGGTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GDVGFLSGINPRKPSQAELRECR*PGGWGG
Trigger: GCCTCCCCACCCTCCGGGGCACCGACACTCACGGAG...CTCTGCCTGACTTGGTTTCCTGGGATTTATCCCTGAAAGAAAACCTACATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGACTTCTGCTCGATGCTaGGAAGGGATTCTTTCACCT +
Preference number: 4 (lower is better)
Translates to: LANSVCLAYSWGWWWGKETSARC*EGILSP
Trigger: AGGTGAAAGAATCCCTTCGCAGCATCGAGCAGAAGT...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAATGTACTTCTGCTCGATaGTGCGAAGGGATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKCTSAR*CEGILS
Trigger: TGAAAGAATCCCTTCGCAGCATCGAGCAGAAGTACA...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp GGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGAAGAGCTTGTACTTCTaGTCGATGCTGCGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: GASLARKQRVPCLQLGLVKSLYF*SMLRRD
Trigger: ATCCCTTCGCAGCATCGAGCAGAAGTACAAGCTCTT...CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCATCTGCACCTGTCCAATaGTGGAGATGGGCCGGATCT +
Preference number: 4 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGASAPVQ*WRWAGS
Trigger: AGATCCGGCCCATCTCCAGCATTGGACAGGTGCAGA...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTACTGGGGTGCCAGAGTaGACGGCCTCAAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVTGVPE*TASKCW
Trigger: CCAGCACTTTGAGGCCGTGCACTCTGGCACCCCAGT...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTCGTGCTGCAGCACCTTaGGCGGCAACTTCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVRAAAP*AATSRS
Trigger: ACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACG...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATGACGAGCGGCTCCCCTaGTGCTCTCCTGGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHDERLP*CSPGAP
Trigger: AGGCGCACCAGGAGAGCACCAGGGGAGCCGCTCGTC...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCTGGGTCCCTATGGCCTaGGCAGGACGAGCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KDQPVKSKLNSKALRRRSWVPMA*AGRAAP
Trigger: GGGAGCCGCTCGTCCTGCCCAGGCCATAGGGACCCA...GCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTATTCCCCTTTGGCTGTaGTCCAGAGAACTAAACACA +
Preference number: 4 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLIPLWL*SRELNT
Trigger: TGTGTTTAGTTCTCTGGACCACAGCCAAAGGGGAAT...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp AGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGCGTGGGCGTTCTCCCTaGAGTGCTCCAGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: RQRGGRILFILDCLPLRKRGRSP*SAPERR
Trigger: CCGCCGCTCTGGAGCACTGCAGGGAGAACGCCCACG...CTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCACCAGGTCATCGCCCTTaGTCAGGAGCCACAAAATCA +
Preference number: 4 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGAPGHRP*SGATKS
Trigger: TGATTTTGTGGCTCCTGAGCAAGGGCGATGACCTGG...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAAGAACCCGCCGGTCTGTaGAGCTGTTGCAGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKEPAGL*SCCSSV
Trigger: AACACTACTGCAACAGCTCCACAGACCGGCGGGTTC...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAACTTAAGTCGTTGCTTTaGCTAACGAGGGTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKLKSLL*LTRVLH
Trigger: ATGCAAAACCCTCGTTAGCCAAAGCAACGACTTAAG...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCAGACGAGCGGCTCCCCTaGTGCTCTCCTGGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSDERLP*CSPGAP
Trigger: AGGCGCACCAGGAGAGCACCAGGGGAGCCGCTCGTC...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp GGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGGCAACTTCTGTAAGTaGGTTTCCTCTTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: GASLARKQRVPCLQLGLVGNFCK*VSSSSA
Trigger: TGCTGATGAAGAGGAAACCCACTTACAGAAGTTGCC...CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTACAGTTGGGGCTGGTaGTGGGGCAAGGAGCAGATG +
Preference number: 4 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVYSWGW*WGKEQM
Trigger: CATCTGCTCCTTGCCCCACCACCAGCCCCAACTGTA...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp GGAGATGTAGGTTTTCTTTCAGGGATAAATCCCAGGAAACCAAGTCAGGCAGAGGTTGGAGTGACTCCGTaGGTGTCGGTGCCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: GDVGFLSGINPRKPSQAEVGVTP*VSVPRR
Trigger: CCTCCGGGGCACCGACACTCACGGAGTCACTCCAAC...CTCTGCCTGACTTGGTTTCCTGGGATTTATCCCTGAAAGAAAACCTACATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR TCA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTGGTTCGACTACGCTGTaGAAACCAGGTCATCGCCCT +
Preference number: 4 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVGSTTL*KPGHRP
Trigger: AGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACC...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp AAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCGCGTTCTCCCTGCAGTaGTCCAGAGCGGCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KDQPVKSKLNSKALRRRSAFSLQ*SRAAVK
Trigger: CTTCACCGCCGCTCTGGAGCACTGCAGGGAGAACGC...GCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCTGCACCTGTCCAATaGTGGAGATGGGCCGGATCT +
Preference number: 4 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVSAPVQ*WRWAGS
Trigger: AGATCCGGCCCATCTCCAGCATTGGACAGGTGCAGA...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAATGCACGGCCTCAAAGTaGTGGCAGAGCTTATTCAGC +
Preference number: 4 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKCTASK*WQSLFS
Trigger: GCTGAATAAGCTCTGCCAGCACTTTGAGGCCGTGCA...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTAGCTTGATCACCCTCTaGAAAACTGCAGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVSLITL*KTAARS
Trigger: GCTGCGGGCTGCAGTTTTGCAGAGGGTGATCAAGCT...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTAAACAGCGTGTGCCTTaGCTACAGTTGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVKQRVP*LQLGLV
Trigger: CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTT...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp CTTGGGCATGAGCCTCTTAGAAGCCGACTTGAGACAGGCATGCCCCCTTGCCTAACGGCCTCAAAGTGCTaGCAGAGCTTATTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LGHEPLRSRLETGMPPCLTASKC*QSLFSS
Trigger: AGAGCTGAATAAGCTCTGCCAGCACTTTGAGGCCGT...TAGGCAAGGGGGCATGCCTGTCTCAAGTCGGCTTCTAAGAGGCTCATGCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CCA 90 bp AGAGAGGAAGTCTCAGTAATATATTGGCTGATTCCCTTGGGGTTAGTAAGTGGCCCCCTGGTGCTCTCCTaGTGCGCCTGGGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: REEVSVIYWLIPLGLVSGPLVLS*CAWGSL
Trigger: GAGTGAGCCCCAGGCGCACCAGGAGAGCACCAGGGG...GCCACTTACTAACCCCAAGGGAATCAGCCAATATATTACTGAGACTTCCTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATGCCTACAGTTGGGGCTaGTGGTGGGGCAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHAYSWG*WWGKEQ
Trigger: CTGCTCCTTGCCCCACCACCAGCCCCAACTGTAGGC...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCGGAGGGGAGCATCCCTaGCTCGCAAACAGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: KDQPVKSKLNSKALRRRSGGEHP*LANSVC
Trigger: GCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCC...GCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp AGAGAGGAAGTCTCAGTAATATATTGGCTGATTCCCTTGGGGTTAGTAAGTGGCGTTGGAGTGACTCCGTaGGTGTCGGTGCCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: REEVSVIYWLIPLGLVSGVGVTP*VSVPRR
Trigger: CCTCCGGGGCACCGACACTCACGGAGTCACTCCAAC...GCCACTTACTAACCCCAAGGGAATCAGCCAATATATTACTGAGACTTCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356311.10
CDS-3UTR TCA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCCAGGAGGTTGTTGGTaGCTGGGGTGCCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHPGGCW*LGCQSA
Trigger: TGCACTCTGGCACCCCAGTCACCAACAACCTCCTGG...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGAATACTTTTTATTCTTaGCTGTCTCCCCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: RGASLARKQRVPCLQLGLNTFYS*LSPPEE
Trigger: TTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATT...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCAGTCCATGGGTACCAGTaGAAAAAGGACCAACCAGTA +
Preference number: 4 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGAVHGYQ*KKDQPV
Trigger: TACTGGTTGGTCCTTTTTTCACTGGTACCCATGGAC...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp GTCAGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGCGTGCTGCAGCACCTTaGGCGGCAACTTCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: VRQRGGRILFILDCLPLRRAAAP*AATSRS
Trigger: ACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACG...CCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp AGAGAGGAAGTCTCAGTAATATATTGGCTGATTCCCTTGGGGTTAGTAAGTGGCTGGGGCTCACTCACGTaGTGCAGCACCTTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: REEVSVIYWLIPLGLVSGWGSLT*CSTLRG
Trigger: GCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCCCCA...GCCACTTACTAACCCCAAGGGAATCAGCCAATATATTACTGAGACTTCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp AAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCCACCCTCTGCAAAACTaGAGCCCGCAGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: KDQPVKSKLNSKALRRRSHPLQN*SPQQGQ
Trigger: CTGTCCCTGCTGCGGGCTGCAGTTTTGCAGAGGGTG...GCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATTGCCTTGCCTACAGTTaGGGCTGGTGGTGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHCLAYS*GWWWGK
Trigger: CTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCA...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR CAA 72 bp AGTGCCCTCCTGGGACCCTCTACCACACCATCCTGTTaGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: SALLGPSTTPSC*GNFCKWVSSSS
Trigger: TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAGGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp AGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGCCAGGAGGTTGTTGGTaGCTGGGGTGCCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RQRGGRILFILDCLPLRKPGGCW*LGCQSA
Trigger: TGCACTCTGGCACCCCAGTCACCAACAACCTCCTGG...CTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAAACTTCTGCTCGATGCTaGGAAGGGATTCTTTCACCT +
Preference number: 4 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKTSARC*EGILSP
Trigger: AGGTGAAAGAATCCCTTCGCAGCATCGAGCAGAAGT...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp GTCAGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGGCGGTGAAGGTGAGCTaGTGCTGCTGGAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: VRQRGGRILFILDCLPLRAVKVS*CCWKSL
Trigger: CAAGCTCTTCCAGCAGCAGCAGCTCACCTTCACCGC...CCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATGCGGTGAAGGTGAGCTaGTGCTGCTGGAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHAVKVS*CCWKSL
Trigger: CAAGCTCTTCCAGCAGCAGCAGCTCACCTTCACCGC...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp AAAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCACCCTCTGCAAAACTaGAGCCCGCAGCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: KGPTSKIQIKQQSSPPTEHPLQN*SPQQGQ
Trigger: CTGTCCCTGCTGCGGGCTGCAGTTTTGCAGAGGGTG...CTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp CAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGCAAGGCCGGATCTTGTCGTaGGCGTTCTCCCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: QRGGRILFILDCLPLRKQGRILS*AFSLQC
Trigger: GCACTGCAGGGAGAACGCCCACGACAAGATCCGGCC...TTGCTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CCA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCAGAGGTTGTTGGTGACTaGGGTGCCAGAGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSEVVGD*GARVHG
Trigger: GCCGTGCACTCTGGCACCCCAGTCACCAACAACCTC...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAAGGCAACTTCTCGGAGTaGGCGATCCATTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKGNFSE*AIHSFI
Trigger: AATGAAAGAATGGATCGCCCACTCCGAGAAGTTGCC...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGCCCCCTTGCCTAGGGTaGCCTCTCTCTCTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RQRGGRILFILDCLPLRKPPCLG*PLSLLS
Trigger: AGACAGCAGAGAGAGAGGCCACCCTAGGCAAGGGGG...CTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR TCA 90 bp GGAGATGTAGGTTTTCTTTCAGGGATAAATCCCAGGAAACCAAGTCAGGCAGAGCCAGAGAAGTTGGAGTaGCTCCGTGAGTGTCGGTGC +
Preference number: 4 (lower is better)
Translates to: GDVGFLSGINPRKPSQAEPEKLE*LRECRC
Trigger: GCACCGACACTCACGGAGTCACTCCAACTTCTCTGG...CTCTGCCTGACTTGGTTTCCTGGGATTTATCCCTGAAAGAAAACCTACATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR TCA 90 bp AAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCCAAAGAGGACCTAGGTaGCAGTTCAGTGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: KDQPVKSKLNSKALRRRSQRGPR*QFSALL
Trigger: CAGGAGGGCACTGAACTGTCACCTAGGTCCTCTTTG...GCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGCAAACTGGGGTGCCAGAGTaGACGGCCTCAAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QRGGRILFILDCLPLRKQTGVPE*TASKCW
Trigger: CCAGCACTTTGAGGCCGTGCACTCTGGCACCCCAGT...TTGCTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCACTCGCAAACAGCGTGTaGCTTGCCTACAGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSLANSV*LAYSWG
Trigger: GCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCAACGCTGAGTTCCACATaGCGACCCCCACTCCATCCT +
Preference number: 4 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSTLSST*RPPLHP
Trigger: AGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGT...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp GTCAGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGGCACCTGTCCAATGCTaGAGATGGGCCGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: VRQRGGRILFILDCLPLRAPVQC*RWAGSC
Trigger: ACAAGATCCGGCCCATCTCCAGCATTGGACAGGTGC...CCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CCA 90 bp CTTGGGCATGAGCCTCTTAGAAGCCGACTTGAGACAGGCATGCCCCCTTGCCTACTTAAGTCGTTGCTTTaGCTAACGAGGGTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: LGHEPLRSRLETGMPPCLLKSLL*LTRVLH
Trigger: ATGCAAAACCCTCGTTAGCCAAAGCAACGACTTAAG...TAGGCAAGGGGGCATGCCTGTCTCAAGTCGGCTTCTAAGAGGCTCATGCCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CCA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATAGTTCAGTGCCCTCCTaGGACCCTCTACCACACCAT +
Preference number: 4 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHSSVPS*DPLPHH
Trigger: ATGGTGTGGTAGAGGGTCCCAGGAGGGCACTGAACT...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp CAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGCAACTCTCTGCTGTCTGCTaGGGCTTACTGCCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: QRGGRILFILDCLPLRKQLSAVC*GLLPSV
Trigger: GACACTGGGCAGTAAGCCTCAGCAGACAGCAGAGAG...TTGCTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp GGAGATGTAGGTTTTCTTTCAGGGATAAATCCCAGGAAACCAAGTCAGGCAGAGTCTGCACCTGTCCAATaGTGGAGATGGGCCGGATCT +
Preference number: 4 (lower is better)
Translates to: GDVGFLSGINPRKPSQAESAPVQ*WRWAGS
Trigger: AGATCCGGCCCATCTCCAGCATTGGACAGGTGCAGA...CTCTGCCTGACTTGGTTTCCTGGGATTTATCCCTGAAAGAAAACCTACATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCAAGCTTGATCACCCTCTaGAAAACTGCAGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSSLITL*KTAARS
Trigger: GCTGCGGGCTGCAGTTTTGCAGAGGGTGATCAAGCT...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCAGCACCTGTCCAATGCTaGAGATGGGCCGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSAPVQC*RWAGSC
Trigger: ACAAGATCCGGCCCATCTCCAGCATTGGACAGGTGC...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp TGTCTTAGGGGAGATGTAGGTTTTCTTTCAGGGATAAATCCCAGGAAACCAAGTGAGGTTGTTGGTGACTaGGGTGCCAGAGTGCACGGC +
Preference number: 4 (lower is better)
Translates to: CLRGDVGFLSGINPRKPSEVVGD*GARVHG
Trigger: GCCGTGCACTCTGGCACCCCAGTCACCAACAACCTC...ACTTGGTTTCCTGGGATTTATCCCTGAAAGAAAACCTACATCTCCCCTAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CCA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTATTCCCCTTTGGCTGTaGTCCAGAGAACTAAACACA +
Preference number: 4 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVIPLWL*SRELNT
Trigger: TGTGTTTAGTTCTCTGGACCACAGCCAAAGGGGAAT...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp TGTCTTAGGGGAGATGTAGGTTTTCTTTCAGGGATAAATCCCAGGAAACCAAGTAGATGTCCAGGAACATaGGCAGAACCCGCCGGTCTG +
Preference number: 4 (lower is better)
Translates to: CLRGDVGFLSGINPRKPSRCPGT*AEPAGL
Trigger: CAGACCGGCGGGTTCTGCTCATGTTCCTGGACATCT...ACTTGGTTTCCTGGGATTTATCCCTGAAAGAAAACCTACATCTCCCCTAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR TCA 90 bp TGTCTTAGGGGAGATGTAGGTTTTCTTTCAGGGATAAATCCCAGGAAACCAAGTGGGCCTCGTCACAGCTaGGGTGGTTCACCACATCAT +
Preference number: 4 (lower is better)
Translates to: CLRGDVGFLSGINPRKPSGPRHS*GGSPHH
Trigger: ATGATGTGGTGAACCACCTCAGCTGTGACGAGGCCC...ACTTGGTTTCCTGGGATTTATCCCTGAAAGAAAACCTACATCTCCCCTAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR TCA 90 bp AAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCCATCAGCACGGAGCCTaGTGCTTAGAAGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: KDQPVKSKLNSKALRRRSHQHGA*CLEVEM
Trigger: CATTTCCACTTCTAAGCATCAGGCTCCGTGCTGATG...GCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATAGATGGTCTCCAGCTTaGTCACCCTCTGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHRWSPA*SPSAKL
Trigger: CAGTTTTGCAGAGGGTGATCAAGCTGGAGACCATCT...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCTAAGTCGTCCCCTGTaGAGGGAAAAACCAACAGTC +
Preference number: 4 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHLSRPL*REKPTV
Trigger: GACTGTTGGTTTTTCCCTTCACAGGGGACGACTTAG...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATAAGGTGAGCTGCTGCTaGTGGAAGAGCTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHKVSCC*WKSLYF
Trigger: GAAGTACAAGCTCTTCCAGCAGCAGCAGCTCACCTT...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCAGTGAAGGTGAGCTGCTaGTGCTGGAAGAGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSVKVSC*CWKSLY
Trigger: GTACAAGCTCTTCCAGCAGCAGCAGCTCACCTTCAC...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp AGAGAGGAAGTCTCAGTAATATATTGGCTGATTCCCTTGGGGTTAGTAAGTGGCAAACAGCGTGTGCCTTaGCTACAGTTGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: REEVSVIYWLIPLGLVSGKQRVP*LQLGLV
Trigger: CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTT...GCCACTTACTAACCCCAAGGGAATCAGCCAATATATTACTGAGACTTCCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGAGCACCCAGAGAAGTTaGAGTGACTCCGTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: RQRGGRILFILDCLPLRKSTQRS*SDSVSV
Trigger: GACACTCACGGAGTCACTCCAACTTCTCTGGGTGCT...CTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CCA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCAAGCACCCAGAGAAGTTaGAGTGACTCCGTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSSTQRS*SDSVSV
Trigger: GACACTCACGGAGTCACTCCAACTTCTCTGGGTGCT...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356311.10
CDS-3UTR CCA 90 bp AGAGAGGAAGTCTCAGTAATATATTGGCTGATTCCCTTGGGGTTAGTAAGTGGCGAACCCGCCGGTCTGTaGAGCTGTTGCAGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: REEVSVIYWLIPLGLVSGEPAGL*SCCSSV
Trigger: AACACTACTGCAACAGCTCCACAGACCGGCGGGTTC...GCCACTTACTAACCCCAAGGGAATCAGCCAATATATTACTGAGACTTCCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCACGGCCTCAAAGTGCTaGCAGAGCTTATTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KDQPVKSKLNSKALRRRSTASKC*QSLFSS
Trigger: AGAGCTGAATAAGCTCTGCCAGCACTTTGAGGCCGT...GCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp AAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCCCACACCATCCTGTTTaGGCAACTTCTGTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: KDQPVKSKLNSKALRRRSPHHPV*ATSVSG
Trigger: CCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGG...GCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
3UTR CAA 72 bp AGAGAGGAAGTCTCAGTAATATATTGGCTGATTCCCTaGGGGTTAGTAAGTGGCAGGGTCCATGGGTACCAG +
Preference number: 4 (lower is better)
Translates to: REEVSVIYWLIP*GLVSGRVHGYQ
Trigger: CTGGTACCCATGGACCCTGCCACTTACTAACCCCAAGGGAATCAGCCAATATATTACTGAGACTTCCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp AAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCTGGTTCACCACATCATaGGGGTATTTTGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KDQPVKSKLNSKALRRRSWFTTS*GYFALR
Trigger: CCTCAGAGCAAAATACCCTCATGATGTGGTGAACCA...GCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTAATACTTTTTATTCTTaGCTGTCTCCCCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVNTFYS*LSPPEE
Trigger: TTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATT...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp AAAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGAGATGGTCTCCAGCTTaGTCACCCTCTGCAAAACTG +
Preference number: 4 (lower is better)
Translates to: KGPTSKIQIKQQSSPPTERWSPA*SPSAKL
Trigger: CAGTTTTGCAGAGGGTGATCAAGCTGGAGACCATCT...CTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp AAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCAAGGCGAAGGAAAGGTaGGTTTATTCCCCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: KDQPVKSKLNSKALRRRSKAKER*VYSPLA
Trigger: AGCCAAAGGGGAATAAACTCACCTTTCCTTCGCCTT...GCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATAAGGCGAAGGAAAGGTaGGTTTATTCCCCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHKAKER*VYSPLA
Trigger: AGCCAAAGGGGAATAAACTCACCTTTCCTTCGCCTT...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp AAAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCTAAGTCGTCCCCTGTaGAGGGAAAAACCAACAGTC +
Preference number: 4 (lower is better)
Translates to: KGPTSKIQIKQQSSPPTELSRPL*REKPTV
Trigger: GACTGTTGGTTTTTCCCTTCACAGGGGACGACTTAG...CTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGCAATGCACGGCCTCAAAGTaGTGGCAGAGCTTATTCAGC +
Preference number: 4 (lower is better)
Translates to: QRGGRILFILDCLPLRKQCTASK*WQSLFS
Trigger: GCTGAATAAGCTCTGCCAGCACTTTGAGGCCGTGCA...TTGCTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp GGAGATGTAGGTTTTCTTTCAGGGATAAATCCCAGGAAACCAAGTCAGGCAGAGTCTGCTGAGGCTTACTaGCCAGTGTCCTTTGATGTC +
Preference number: 4 (lower is better)
Translates to: GDVGFLSGINPRKPSQAESAEAY*PVSFDV
Trigger: GACATCAAAGGACACTGGGCAGTAAGCCTCAGCAGA...CTCTGCCTGACTTGGTTTCCTGGGATTTATCCCTGAAAGAAAACCTACATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp AGAGAGGAAGTCTCAGTAATATATTGGCTGATTCCCTTGGGGTTAGTAAGTGGCCCAGGTCATCGCCCTTaGTCAGGAGCCACAAAATCA +
Preference number: 4 (lower is better)
Translates to: REEVSVIYWLIPLGLVSGPGHRP*SGATKS
Trigger: TGATTTTGTGGCTCCTGAGCAAGGGCGATGACCTGG...GCCACTTACTAACCCCAAGGGAATCAGCCAATATATTACTGAGACTTCCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CCA 90 bp TCCCAGGAAACCAAGTCAGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGAACCCGCCGGTCTGTaGAGCTGTTGCAGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: SQETKSGREVVEYFLFLTEPAGL*SCCSSV
Trigger: AACACTACTGCAACAGCTCCACAGACCGGCGGGTTC...AGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCTGACTTGGTTTCCTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CCA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCACCACACCATCCTGTTTaGGCAACTTCTGTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSPHHPV*ATSVSG
Trigger: CCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGG...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp CAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGCAAGAGGGTATTTTGCTCTaGGGCTGCTTAAGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: QRGGRILFILDCLPLRKQEGILL*GCLSRC
Trigger: GCAACGACTTAAGCAGCCTCAGAGCAAAATACCCTC...TTGCTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR TCA 90 bp GGAGATGTAGGTTTTCTTTCAGGGATAAATCCCAGGAAACCAAGTCAGGCAGAGTGGTTCACCACATCATaGGGGTATTTTGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: GDVGFLSGINPRKPSQAEWFTTS*GYFALR
Trigger: CCTCAGAGCAAAATACCCTCATGATGTGGTGAACCA...CTCTGCCTGACTTGGTTTCCTGGGATTTATCCCTGAAAGAAAACCTACATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR TCA 90 bp GTCAGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGTTGACTGTCTCCCCCTaGGGAAGCAACAATAATACA +
Preference number: 4 (lower is better)
Translates to: VRQRGGRILFILDCLPLRLTVSP*GSNNNT
Trigger: TGTATTATTGTTGCTTCCTCAGGGGGAGACAGTCAA...CCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATTGTACTTCTGCTCGATaGTGCGAAGGGATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHCTSAR*CEGILS
Trigger: TGAAAGAATCCCTTCGCAGCATCGAGCAGAAGTACA...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCAAAGAGCTTGTACTTCTaGTCGATGCTGCGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSKSLYF*SMLRRD
Trigger: ATCCCTTCGCAGCATCGAGCAGAAGTACAAGCTCTT...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp TGTCTTAGGGGAGATGTAGGTTTTCTTTCAGGGATAAATCCCAGGAAACCAAGTGTGAAGGTGAGCTGCTaGTGCTGGAAGAGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: CLRGDVGFLSGINPRKPSVKVSC*CWKSLY
Trigger: GTACAAGCTCTTCCAGCAGCAGCAGCTCACCTTCAC...ACTTGGTTTCCTGGGATTTATCCCTGAAAGAAAACCTACATCTCCCCTAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp CAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGCAAACTTCTGCTCGATGCTaGGAAGGGATTCTTTCACCT +
Preference number: 4 (lower is better)
Translates to: QRGGRILFILDCLPLRKQTSARC*EGILSP
Trigger: AGGTGAAAGAATCCCTTCGCAGCATCGAGCAGAAGT...TTGCTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp TGTCTTAGGGGAGATGTAGGTTTTCTTTCAGGGATAAATCCCAGGAAACCAAGTAAGGTGAGCTGCTGCTaGTGGAAGAGCTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: CLRGDVGFLSGINPRKPSKVSCC*WKSLYF
Trigger: GAAGTACAAGCTCTTCCAGCAGCAGCAGCTCACCTT...ACTTGGTTTCCTGGGATTTATCCCTGAAAGAAAACCTACATCTCCCCTAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CCA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCTTAAGTCGTTGCTTTaGCTAACGAGGGTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHLKSLL*LTRVLH
Trigger: ATGCAAAACCCTCGTTAGCCAAAGCAACGACTTAAG...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR TCA 90 bp AGAGAGGAAGTCTCAGTAATATATTGGCTGATTCCCTTGGGGTTAGTAAGTGGCTTGACTGTCTCCCCCTaGGGAAGCAACAATAATACA +
Preference number: 4 (lower is better)
Translates to: REEVSVIYWLIPLGLVSGLTVSP*GSNNNT
Trigger: TGTATTATTGTTGCTTCCTCAGGGGGAGACAGTCAA...GCCACTTACTAACCCCAAGGGAATCAGCCAATATATTACTGAGACTTCCTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR GCA 90 bp CAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGCAATGTACTTCTGCTCGATaGTGCGAAGGGATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QRGGRILFILDCLPLRKQCTSAR*CEGILS
Trigger: TGAAAGAATCCCTTCGCAGCATCGAGCAGAAGTACA...TTGCTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR GCA 90 bp TCCCAGGAAACCAAGTCAGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTAAGAGCTTGTACTTCTaGTCGATGCTGCGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: SQETKSGREVVEYFLFLTKSLYF*SMLRRD
Trigger: ATCCCTTCGCAGCATCGAGCAGAAGTACAAGCTCTT...AGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCTGACTTGGTTTCCTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CCA 90 bp TGTCTTAGGGGAGATGTAGGTTTTCTTTCAGGGATAAATCCCAGGAAACCAAGTGGCAACTTCTCGGAGTaGGCGATCCATTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: CLRGDVGFLSGINPRKPSGNFSE*AIHSFI
Trigger: AATGAAAGAATGGATCGCCCACTCCGAGAAGTTGCC...ACTTGGTTTCCTGGGATTTATCCCTGAAAGAAAACCTACATCTCCCCTAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR TCA 90 bp AGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGAATACTTTTTATTCTTaGCTGTCTCCCCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: RQRGGRILFILDCLPLRKNTFYS*LSPPEE
Trigger: TTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATT...CTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS GCA 90 bp TCGCGACGCTGGCGGCGGCTCGGGAGCCTCCACTGCGACGTCGGGTaGGCGGCCGGGACCCGCAGCTGGGGCCGAGTCGCGCGCCCACGA +
Preference number: 5 (lower is better)
Translates to: SRRWRRLGSLHCDVG*AAGTRSWGRVARPR
Trigger: TCGTGGGCGCGCGACTCGGCCCCAGCTGCGGGTCCCGGCCGCGCACCCGACGTCGCAGTGGAGGCTCCCGAGCCGCCGCCAGCGTCGCGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372136.7
CDS GCA 90 bp CACCCCTGCCCGTCGCGACGCTGGCGGCGGCTCGGGAGCCTCCACTaGGACGTCGGGTGCGCGGCCGGGACCCGCAGCTGGGGCCGAGTC +
Preference number: 5 (lower is better)
Translates to: HPCPSRRWRRLGSLH*DVGCAAGTRSWGRV
Trigger: GACTCGGCCCCAGCTGCGGGTCCCGGCCGCGCACCCGACGTCGCAGTGGAGGCTCCCGAGCCGCCGCCAGCGTCGCGACGGGCAGGGGTG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372136.7
CDS CCA 90 bp GGGAGCCTCCACTGCGACGTCGGGTGCGCGGCCGGGACCCGCAGCTaGGGCCGAGTCGCGCGCCCACGAAGCAGCCCAACTCGGGATGTA +
Preference number: 5 (lower is better)
Translates to: GSLHCDVGCAAGTRS*GRVARPRSSPTRDV
Trigger: TACATCCCGAGTTGGGCTGCTTCGTGGGCGCGCGACTCGGCCCCAGCTGCGGGTCCCGGCCGCGCACCCGACGTCGCAGTGGAGGCTCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372136.7
CDS CCA 90 bp TTCGAGTTGATGCAGGTGACCGGACACCCCTGCCCGTCGCGACGCTaGCGGCGGCTCGGGAGCCTCCACTGCGACGTCGGGTGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: FELMQVTGHPCPSRR*RRLGSLHCDVGCAA
Trigger: GGCCGCGCACCCGACGTCGCAGTGGAGGCTCCCGAGCCGCCGCCAGCGTCGCGACGGGCAGGGGTGTCCGGTCACCTGCATCAACTCGAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372136.7
CDS CCA 90 bp GTCCCTATGGCCTGGGCAGGACGAGCGGCTCCCCTGGTGCTCTCCTaGTGCGCCTGGGGCTCACTCACGTGCTGCAGCACCTTGCGCGGC +
Preference number: 5 (lower is better)
Translates to: VPMAWAGRAAPLVLS*CAWGSLTCCSTLRG
Trigger: GCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCCCCAGGCGCACCAGGAGAGCACCAGGGGAGCCGCTCGTCCTGCCCAGGCCATAGGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS GCA 90 bp CCTATGGCCTGGGCAGGACGAGCGGCTCCCCTGGTGCTCTCCTGGTaGGCCTGGGGCTCACTCACGTGCTGCAGCACCTTGCGCGGCAAC +
Preference number: 5 (lower is better)
Translates to: PMAWAGRAAPLVLSW*AWGSLTCCSTLRGN
Trigger: GTTGCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCCCCAGGCGCACCAGGAGAGCACCAGGGGAGCCGCTCGTCCTGCCCAGGCCATAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS CCA 90 bp GCCTGGGCAGGACGAGCGGCTCCCCTGGTGCTCTCCTGGTGCGCCTaGGGCTCACTCACGTGCTGCAGCACCTTGCGCGGCAACTTCTCG +
Preference number: 5 (lower is better)
Translates to: AWAGRAAPLVLSWCA*GSLTCCSTLRGNFS
Trigger: CGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCCCCAGGCGCACCAGGAGAGCACCAGGGGAGCCGCTCGTCCTGCCCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS GCA 90 bp GCGGCTCCCCTGGTGCTCTCCTGGTGCGCCTGGGGCTCACTCACGTaGTGCAGCACCTTGCGCGGCAACTTCTCGGAGTGGGCGATCCAT +
Preference number: 5 (lower is better)
Translates to: AAPLVLSWCAWGSLT*CSTLRGNFSEWAIH
Trigger: ATGGATCGCCCACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCCCCAGGCGCACCAGGAGAGCACCAGGGGAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS TCA 90 bp CGCTCTTCGCTCCACGGAGCACCCAGAGAAGTTGGAGTGACTCCGTaGGTGTCGGTGCCCCGGAGGGTGGGGAGGCCCGTTCCAGGACTT +
Preference number: 5 (lower is better)
Translates to: RSSLHGAPREVGVTP*VSVPRRVGRPVPGL
Trigger: AAGTCCTGGAACGGGCCTCCCCACCCTCCGGGGCACCGACACTCACGGAGTCACTCCAACTTCTCTGGGTGCTCCGTGGAGCGAAGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350499.6
ENST00000356311.10
CDS GCA 90 bp GCTCCCCTGGTGCTCTCCTGGTGCGCCTGGGGCTCACTCACGTGCTaGAGCACCTTGCGCGGCAACTTCTCGGAGTGGGCGATCCATTCT +
Preference number: 5 (lower is better)
Translates to: APLVLSWCAWGSLTC*STLRGNFSEWAIHS
Trigger: AGAATGGATCGCCCACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCCCCAGGCGCACCAGGAGAGCACCAGGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS CCA 90 bp GCTTGTCCTAGAGCGCTCTTCGCTCCACGGAGCACCCAGAGAAGTTaGAGTGACTCCGTGAGTGTCGGTGCCCCGGAGGGTGGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: ACPRALFAPRSTQRS*SDSVSVGAPEGGEA
Trigger: GGCCTCCCCACCCTCCGGGGCACCGACACTCACGGAGTCACTCCAACTTCTCTGGGTGCTCCGTGGAGCGAAGAGCGCTCTAGGACAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350499.6
ENST00000356311.10
CDS GCA 90 bp ATGCTGGAGATGGGCCGGATCTTGTCGTGGGCGTTCTCCCTGCAGTaGTCCAGAGCGGCGGTGAAGGTGAGCTGCTGCTGCTGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: MLEMGRILSWAFSLQ*SRAAVKVSCCCWKS
Trigger: GCTCTTCCAGCAGCAGCAGCTCACCTTCACCGCCGCTCTGGAGCACTGCAGGGAGAACGCCCACGACAAGATCCGGCCCATCTCCAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGACGTGCTGCAGCACCTaGCGCGGCAACTTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: RGASLARKQRVPCLQLGLTCCST*RGNFSE
Trigger: CTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGT...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS CCA 90 bp CTGGCTTTTGTGAGCTGTCTACACTTGTGTTTAGTGGCCCTGGGCTaGGTCCCTATGGCCTGGGCAGGACGAGCGGCTCCCCTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: LAFVSCLHLCLVALG*VPMAWAGRAAPLVL
Trigger: GAGCACCAGGGGAGCCGCTCGTCCTGCCCAGGCCATAGGGACCCAGCCCAGGGCCACTAAACACAAGTGTAGACAGCTCACAAAAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAACAAACAGCGTGTGCCTaGCCTACAGTTGGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKQTACA*PTVGAG
Trigger: ACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTG...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS GCA 90 bp TGGGCGTTCTCCCTGCAGTGCTCCAGAGCGGCGGTGAAGGTGAGCTaGTGCTGCTGGAAGAGCTTGTACTTCTGCTCGATGCTGCGAAGG +
Preference number: 5 (lower is better)
Translates to: WAFSLQCSRAAVKVS*CCWKSLYFCSMLRR
Trigger: CCTTCGCAGCATCGAGCAGAAGTACAAGCTCTTCCAGCAGCAGCAGCTCACCTTCACCGCCGCTCTGGAGCACTGCAGGGAGAACGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGTTCTCCAGGAGGTTGTaGGTGACTGGGGTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: LANSVCLAYSWGWWWGKEFSRRL*VTGVPE
Trigger: CTCTGGCACCCCAGTCACCAACAACCTCCTGGAGAA...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp CTTGGGCATGAGCCTCTTAGAAGCCGACTTGAGACAGGCATGCCCCCTTGCCTAGACAGGCATGCCCCCTaGCCTAGGGTGGCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LGHEPLRSRLETGMPPCLDRHAP*PRVASL
Trigger: GAGAGAGGCCACCCTAGGCAAGGGGGCATGCCTGTC...TAGGCAAGGGGGCATGCCTGTCTCAAGTCGGCTTCTAAGAGGCTCATGCCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS GCA 90 bp GCGTTCTCCCTGCAGTGCTCCAGAGCGGCGGTGAAGGTGAGCTGCTaGTGCTGGAAGAGCTTGTACTTCTGCTCGATGCTGCGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: AFSLQCSRAAVKVSC*CWKSLYFCSMLRRD
Trigger: ATCCCTTCGCAGCATCGAGCAGAAGTACAAGCTCTTCCAGCAGCAGCAGCTCACCTTCACCGCCGCTCTGGAGCACTGCAGGGAGAACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCAGAGATGGGCCGGATCTaGTCGTGGGCGTTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGAEMGRI*SWAFSL
Trigger: CAGGGAGAACGCCCACGACAAGATCCGGCCCATCTC...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGCATTTCTCCAGGAGGTaGTTGGTGACTGGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: RGASLARKQRVPCLQLGLHFSRR*LVTGVP
Trigger: TGGCACCCCAGTCACCAACAACCTCCTGGAGAAATG...CAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGGTGAGCTGTCTACACTaGTGTTTAGTGGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LANSVCLAYSWGWWWGKEVSCLH*CLVALG
Trigger: GCCCAGGGCCACTAAACACAAGTGTAGACAGCTCAC...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGGAACATCCCCTGGGTTaGAGGCTGGCTTTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: LANSVCLAYSWGWWWGKEEHPLG*RLAFVS
Trigger: GCTCACAAAAGCCAGCCTCAAACCCAGGGGATGTTC...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCAGTGCCTTGCCTACAGTaGGGGCTGGTGGTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGAVPCLQ*GLVVGQ
Trigger: TTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCAC...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS GCA 90 bp TGCTCTCCTGGTGCGCCTGGGGCTCACTCACGTGCTGCAGCACCTTaGGCGGCAACTTCTCGGAGTGGGCGATCCATTCTTTCATTAAGT +
Preference number: 5 (lower is better)
Translates to: CSPGAPGAHSRAAAP*AATSRSGRSILSLS
Trigger: ACTTAATGAAAGAATGGATCGCCCACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCCCCAGGCGCACCAGGAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTAGGCTGCTTAAGTCGTaGCTTTGGCTAACGAGGGTT +
Preference number: 5 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLRLLKS*LWLTRV
Trigger: AACCCTCGTTAGCCAAAGCAACGACTTAAGCAGCCT...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS GCA 90 bp TTCTCCCTGCAGTGCTCCAGAGCGGCGGTGAAGGTGAGCTGCTGCTaGTGGAAGAGCTTGTACTTCTGCTCGATGCTGCGAAGGGATTCT +
Preference number: 5 (lower is better)
Translates to: FSLQCSRAAVKVSCC*WKSLYFCSMLRRDS
Trigger: AGAATCCCTTCGCAGCATCGAGCAGAAGTACAAGCTCTTCCAGCAGCAGCAGCTCACCTTCACCGCCGCTCTGGAGCACTGCAGGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp CTCCTGGGACCCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTGAGATGGGCCGGATCTaGTCGTGGGCGTTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LLGPSTTPSCLGNFCKWVEMGRI*SWAFSL
Trigger: CAGGGAGAACGCCCACGACAAGATCCGGCCCATCTC...AACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGGGTCCCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGAGGCTGCTTAAGTCGTaGCTTTGGCTAACGAGGGTT +
Preference number: 5 (lower is better)
Translates to: LANSVCLAYSWGWWWGKERLLKS*LWLTRV
Trigger: AACCCTCGTTAGCCAAAGCAACGACTTAAGCAGCCT...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp CTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGGTGGGGCAAGGAGTATTGGCTGATTCCCTaGGGGTTAGTAAGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: LANSVCLAYSWGWWWGKEYWLIP*GLVSGR
Trigger: CCTGCCACTTACTAACCCCAAGGGAATCAGCCAATA...CTCCTTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp GGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTGCCTACAGTTGGGGCTGGTGCAGTCAGACATTACTTaGGGCAAGCTCAGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: GASLARKQRVPCLQLGLVQSDIT*GKLRSQ
Trigger: CTGGCTTCTGAGCTTGCCCAAAGTAATGTCTGACTG...CACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTGCGAGCCAGGGATGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS CCA 90 bp GGCTCACTCACGTGCTGCAGCACCTTGCGCGGCAACTTCTCGGAGTaGGCGATCCATTCTTTCATTAAGTCTAGGATGAGGGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: GSLTCCSTLRGNFSE*AIHSFIKSRMRGMR
Trigger: CCTCATCCCCCTCATCCTAGACTTAATGAAAGAATGGATCGCCCACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp CTTGGGCATGAGCCTCTTAGAAGCCGACTTGAGACAGGCATGCCCCCTTGCCTACTCTTAGAAGCCGACTaGAGACAGGCATGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: LGHEPLRSRLETGMPPCLLLEAD*RQACPL
Trigger: AAGGGGGCATGCCTGTCTCAAGTCGGCTTCTAAGAG...TAGGCAAGGGGGCATGCCTGTCTCAAGTCGGCTTCTAAGAGGCTCATGCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CAA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTCACATTTTACAATGTTaGGGGTTCGACTACGCTGTG +
Preference number: 5 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLHILQC*GFDYAV
Trigger: CACAGCGTAGTCGAACCCCAAACATTGTAAAATGTG...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AACTGCAGCCCGCAGCAGGGACAGGCGTGGCACTGGAGCCGGATGTGGCTCAAACACATTTTACAATGTTaGGGGTTCGACTACGCTGTG +
Preference number: 5 (lower is better)
Translates to: NCSPQQGQAWHWSRMWLKHILQC*GFDYAV
Trigger: CACAGCGTAGTCGAACCCCAAACATTGTAAAATGTG...TTTGAGCCACATCCGGCTCCAGTGCCACGCCTGTCCCTGCTGCGGGCTGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCATGCTGCTGGAAGAGCTaGTACTTCTGCTCGATGCTG +
Preference number: 5 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGACCWKS*YFCSML
Trigger: CAGCATCGAGCAGAAGTACAAGCTCTTCCAGCAGCA...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp CCCCCACTCCATCCTGGAGGGGAGCATCCCTGGCTCGCAAACAGCGTGTGCCTTAGTCTCAGTAATATATaGGCTGATTCCCTTGGGGTT +
Preference number: 5 (lower is better)
Translates to: PPLHPGGEHPWLANSVCLSLSNI*ADSLGV
Trigger: AACCCCAAGGGAATCAGCCAATATATTACTGAGACT...AAGGCACACGCTGTTTGCGAGCCAGGGATGCTCCCCTCCAGGATGGAGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCATGGCTAACGAGGGTTTaGCATTTCTCCAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGAWLTRV*HFSRRL
Trigger: CAACCTCCTGGAGAAATGCAAAACCCTCGTTAGCCA...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AATAAACACGCTGAGTTCCACATGCCGACCCCCACTCCATCCTGGAGGGGAGCATATTGGCTGATTCCCTaGGGGTTAGTAAGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: NKHAEFHMPTPTPSWRGAYWLIP*GLVSGR
Trigger: CCTGCCACTTACTAACCCCAAGGGAATCAGCCAATA...TGCTCCCCTCCAGGATGGAGTGGGGGTCGGCATGTGGAACTCAGCGTGTTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCGTGCCTTGCCTACAGTaGGGGCTGGTGGTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: KDQPVKSKLNSKALRRRSVPCLQ*GLVVGQ
Trigger: TTGCCCCACCACCAGCCCCAACTGTAGGCAAGGCAC...GCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp GGGTTCGACTACGCTGTGAAAACCAGGTCATCGCCCTTGCTCAGGAGCCACAAAAACCACATCTTCGAGTaGATGCAGGTGACCGGACAC +
Preference number: 5 (lower is better)
Translates to: GFDYAVKTRSSPLLRSHKNHIFE*MQVTGH
Trigger: GTGTCCGGTCACCTGCATCAACTCGAAGATGTGGTT...TTTGTGGCTCCTGAGCAAGGGCGATGACCTGGTTTTCACAGCGTAGTCGAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372136.7
CDS TCA 90 bp TCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCTCCTGGCTCTaGGTTACAATTTCCCACCAGGAGGCCTCCAGGGTGGTTTTGAAC +
Preference number: 5 (lower is better)
Translates to: SKLNSKALRRRSSWL*VTISHQEASRVVLN
Trigger: GTTCAAAACCACCCTGGAGGCCTCCTGGTGGGAAATTGTAACTCAGAGCCAGGAGCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS GCA 90 bp GCGGCGGTGAAGGTGAGCTGCTGCTGCTGGAAGAGCTTGTACTTCTaGTCGATGCTGCGAAGGGATTCTTTCACCTCATTCATTGTCTTC +
Preference number: 5 (lower is better)
Translates to: AAVKVSCCCWKSLYF*SMLRRDSFTSFIVF
Trigger: GAAGACAATGAATGAGGTGAAAGAATCCCTTCGCAGCATCGAGCAGAAGTACAAGCTCTTCCAGCAGCAGCAGCTCACCTTCACCGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGGAGATGGGCCGGATCTaGTCGTGGGCGTTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: RQRGGRILFILDCLPLRKEMGRI*SWAFSL
Trigger: CAGGGAGAACGCCCACGACAAGATCCGGCCCATCTC...CTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CAA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCAACGTGCTGCAGCACCTaGCGCGGCAACTTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSTCCST*RGNFSE
Trigger: CTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGT...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCTTCTCCAGGAGGTTGTaGGTGACTGGGGTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: KDQPVKSKLNSKALRRRSFSRRL*VTGVPE
Trigger: CTCTGGCACCCCAGTCACCAACAACCTCCTGGAGAA...GCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp TGTCTTAGGGGAGATGTAGGTTTTCTTTCAGGGATAAATCCCAGGAAACCAAGTCCGTGCTGCAGCACCTaGCGCGGCAACTTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: CLRGDVGFLSGINPRKPSPCCST*RGNFSE
Trigger: CTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGG...ACTTGGTTTCCTGGGATTTATCCCTGAAAGAAAACCTACATCTCCCCTAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CAA 90 bp AGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGTTCTCCAGGAGGTTGTaGGTGACTGGGGTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: RQRGGRILFILDCLPLRKFSRRL*VTGVPE
Trigger: CTCTGGCACCCCAGTCACCAACAACCTCCTGGAGAA...CTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CAA 90 bp GTCAGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGCATTTCTCCAGGAGGTaGTTGGTGACTGGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: VRQRGGRILFILDCLPLRHFSRR*LVTGVP
Trigger: TGGCACCCCAGTCACCAACAACCTCCTGGAGAAATG...CCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CAA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATGTGAGCTGTCTACACTaGTGTTTAGTGGCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHVSCLH*CLVALG
Trigger: GCCCAGGGCCACTAAACACAAGTGTAGACAGCTCAC...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCACAAACAGCGTGTGCCTaGCCTACAGTTGGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSQTACA*PTVGAG
Trigger: ACCAGCCCCAACTGTAGGCAAGGCACACGCTGTTTG...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCACCAGGTCATCGCCCTaGCTCAGGAGCCACAAAATC +
Preference number: 5 (lower is better)
Translates to: KDQPVKSKLNSKALRRRSTRSSP*LRSHKI
Trigger: GATTTTGTGGCTCCTGAGCAAGGGCGATGACCTGGT...GCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp GTCAGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGTGCTGCTGGAAGAGCTaGTACTTCTGCTCGATGCTG +
Preference number: 5 (lower is better)
Translates to: VRQRGGRILFILDCLPLRCCWKS*YFCSML
Trigger: CAGCATCGAGCAGAAGTACAAGCTCTTCCAGCAGCA...CCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CAA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCACATTTCTCCAGGAGGTaGTTGGTGACTGGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSHFSRR*LVTGVP
Trigger: TGGCACCCCAGTCACCAACAACCTCCTGGAGAAATG...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AAAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGGAACATCCCCTGGGTTaGAGGCTGGCTTTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: KGPTSKIQIKQQSSPPTEEHPLG*RLAFVS
Trigger: GCTCACAAAAGCCAGCCTCAAACCCAGGGGATGTTC...CTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCAACCAGGTCATCGCCCTaGCTCAGGAGCCACAAAATC +
Preference number: 5 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSTRSSP*LRSHKI
Trigger: GATTTTGTGGCTCCTGAGCAAGGGCGATGACCTGGT...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AGGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGGGAGAAGAGGAATCCTaGCTTGTCCTAGAGCGCTCT +
Preference number: 5 (lower is better)
Translates to: RQRGGRILFILDCLPLRKGEEES*LVLERS
Trigger: AGAGCGCTCTAGGACAAGCAAGGATTCCTCTTCTCC...CTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CAA 90 bp AAAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGGGAGAAGAGGAATCCTaGCTTGTCCTAGAGCGCTCT +
Preference number: 5 (lower is better)
Translates to: KGPTSKIQIKQQSSPPTEGEEES*LVLERS
Trigger: AGAGCGCTCTAGGACAAGCAAGGATTCCTCTTCTCC...CTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356311.10
CDS-3UTR CAA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATACCACACCATCCTGTTaGGGCAACTTCTGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHTTPSC*GNFCKW
Trigger: CCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGT...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCAGATGGTCTCCAGCTaGATCACCCTCTGCAAAACT +
Preference number: 5 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHQMVSS*ITLCKT
Trigger: AGTTTTGCAGAGGGTGATCAAGCTGGAGACCATCTG...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AAGGACCAACCAGTAAAATCCAAATTAAACAGCAAAGCTCTCCGCCGACGGAGCCAGATGGTCTCCAGCTaGATCACCCTCTGCAAAACT +
Preference number: 5 (lower is better)
Translates to: KDQPVKSKLNSKALRRRSQMVSS*ITLCKT
Trigger: AGTTTTGCAGAGGGTGATCAAGCTGGAGACCATCTG...GCTCCGTCGGCGGAGAGCTTTGCTGTTTAATTTGGATTTTACTGGTTGGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp AGAGAGGAAGTCTCAGTAATATATTGGCTGATTCCCTTGGGGTTAGTAAGTGGCTGCTGCTGGAAGAGCTaGTACTTCTGCTCGATGCTG +
Preference number: 5 (lower is better)
Translates to: REEVSVIYWLIPLGLVSGCCWKS*YFCSML
Trigger: CAGCATCGAGCAGAAGTACAAGCTCTTCCAGCAGCA...GCCACTTACTAACCCCAAGGGAATCAGCCAATATATTACTGAGACTTCCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCATGGCTAACGAGGGTTTaGCATTTCTCCAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSWLTRV*HFSRRL
Trigger: CAACCTCCTGGAGAAATGCAAAACCCTCGTTAGCCA...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS-3UTR CAA 90 bp GGAGATGTAGGTTTTCTTTCAGGGATAAATCCCAGGAAACCAAGTCAGGCAGAGAGGCTGCTTAAGTCGTaGCTTTGGCTAACGAGGGTT +
Preference number: 5 (lower is better)
Translates to: GDVGFLSGINPRKPSQAERLLKS*LWLTRV
Trigger: AACCCTCGTTAGCCAAAGCAACGACTTAAGCAGCCT...CTCTGCCTGACTTGGTTTCCTGGGATTTATCCCTGAAAGAAAACCTACATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CAA 90 bp TCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATCAACCACACCATCCTGTTaGGGCAACTTCTGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: STTPSCLGNFCKWVSSSSTTPSC*GNFCKW
Trigger: CCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGT...TGATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS TCA 90 bp GGCAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTaGGGAAGCAACAATAATACAGAAGCTAAGTCGTCCCGTGCTGCA +
Preference number: 5 (lower is better)
Translates to: GREVVEYFLFLTVSP*GSNNNTEAKSSRAA
Trigger: TGCAGCACGGGACGACTTAGCTTCTGTATTATTGTTGCTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CAA 90 bp CAGAGAGGTGGTAGAATACTTTTTATTCTTGACTGTCTCCCCCTGAGGAAGCAATGGCTAACGAGGGTTTaGCATTTCTCCAGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: QRGGRILFILDCLPLRKQWLTRV*HFSRRL
Trigger: CAACCTCCTGGAGAAATGCAAAACCCTCGTTAGCCA...TTGCTTCCTCAGGGGGAGACAGTCAAGAATAAAAAGTATTCTACCACCTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS-3UTR CAA 90 bp CCTCTACCACACCATCCTGTTTGGGCAACTTCTGTAAGTGGGTTTCCTCTTCATAGTCTCAGTAATATATaGGCTGATTCCCTTGGGGTT +
Preference number: 5 (lower is better)
Translates to: PLPHHPVWATSVSGFPLHSLSNI*ADSLGV
Trigger: AACCCCAAGGGAATCAGCCAATATATTACTGAGACT...ATGAAGAGGAAACCCACTTACAGAAGTTGCCCAAACAGGATGGTGTGGTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS CCA 72 bp CACTGCGACGTCGGGTGCGCGGCCGGGACCCGCAGCTaGGGCCGAGTCGCGCGCCCACGAAGCAGCCCAACT +
Preference number: 6 (lower is better)
Translates to: HCDVGCAAGTRS*GRVARPRSSPT
Trigger: AGTTGGGCTGCTTCGTGGGCGCGCGACTCGGCCCCAGCTGCGGGTCCCGGCCGCGCACCCGACGTCGCAGTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372136.7
CDS CCA 72 bp ATGCAGGTGACCGGACACCCCTGCCCGTCGCGACGCTaGCGGCGGCTCGGGAGCCTCCACTGCGACGTCGGG +
Preference number: 6 (lower is better)
Translates to: MQVTGHPCPSRR*RRLGSLHCDVG
Trigger: CCCGACGTCGCAGTGGAGGCTCCCGAGCCGCCGCCAGCGTCGCGACGGGCAGGGGTGTCCGGTCACCTGCAT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372136.7
CDS CCA 72 bp GGACGAGCGGCTCCCCTGGTGCTCTCCTGGTGCGCCTaGGGCTCACTCACGTGCTGCAGCACCTTGCGCGGC +
Preference number: 6 (lower is better)
Translates to: GRAAPLVLSWCA*GSLTCCSTLRG
Trigger: GCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCCCCAGGCGCACCAGGAGAGCACCAGGGGAGCCGCTCGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS GCA 72 bp TGGGCAGGACGAGCGGCTCCCCTGGTGCTCTCCTGGTaGGCCTGGGGCTCACTCACGTGCTGCAGCACCTTG +
Preference number: 6 (lower is better)
Translates to: WAGRAAPLVLSW*AWGSLTCCSTL
Trigger: CAAGGTGCTGCAGCACGTGAGTGAGCCCCAGGCGCACCAGGAGAGCACCAGGGGAGCCGCTCGTCCTGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS GCA 72 bp TCCCTATGGCCTGGGCAGGACGAGCGGCTCCCCTGGTaGTCTCCTGGTGCGCCTGGGGCTCACTCACGTGCT +
Preference number: 6 (lower is better)
Translates to: SLWPGQDERLPW*SPGAPGAHSRA
Trigger: AGCACGTGAGTGAGCCCCAGGCGCACCAGGAGAGCACCAGGGGAGCCGCTCGTCCTGCCCAGGCCATAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS GCA 72 bp GTGCTCTCCTGGTGCGCCTGGGGCTCACTCACGTGCTaGAGCACCTTGCGCGGCAACTTCTCGGAGTGGGCG +
Preference number: 6 (lower is better)
Translates to: VLSWCAWGSLTC*STLRGNFSEWA
Trigger: CGCCCACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCCCCAGGCGCACCAGGAGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS TCA 72 bp CTCCACGGAGCACCCAGAGAAGTTGGAGTGACTCCGTaGGTGTCGGTGCCCCGGAGGGTGGGGAGGCCCGTT +
Preference number: 6 (lower is better)
Translates to: LHGAPREVGVTP*VSVPRRVGRPV
Trigger: AACGGGCCTCCCCACCCTCCGGGGCACCGACACTCACGGAGTCACTCCAACTTCTCTGGGTGCTCCGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350499.6
ENST00000356311.10
CDS GCA 72 bp CTGGTGCTCTCCTGGTGCGCCTGGGGCTCACTCACGTaGTGCAGCACCTTGCGCGGCAACTTCTCGGAGTGG +
Preference number: 6 (lower is better)
Translates to: LVLSWCAWGSLT*CSTLRGNFSEW
Trigger: CCACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCCCCAGGCGCACCAGGAGAGCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS TCA 72 bp GCTCTTCGCTCCACGGAGCACCCAGAGAAGTTGGAGTaGCTCCGTGAGTGTCGGTGCCCCGGAGGGTGGGGA +
Preference number: 6 (lower is better)
Translates to: ALRSTEHPEKLE*LRECRCPGGWG
Trigger: TCCCCACCCTCCGGGGCACCGACACTCACGGAGTCACTCCAACTTCTCTGGGTGCTCCGTGGAGCGAAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350499.6
ENST00000356311.10
CDS GCA 72 bp ATGGGCCGGATCTTGTCGTGGGCGTTCTCCCTGCAGTaGTCCAGAGCGGCGGTGAAGGTGAGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: MGRILSWAFSLQ*SRAAVKVSCCC
Trigger: GCAGCAGCAGCTCACCTTCACCGCCGCTCTGGAGCACTGCAGGGAGAACGCCCACGACAAGATCCGGCCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS GCA 72 bp GGTGCGCCTGGGGCTCACTCACGTGCTGCAGCACCTTaGGCGGCAACTTCTCGGAGTGGGCGATCCATTCTT +
Preference number: 6 (lower is better)
Translates to: GAPGAHSRAAAP*AATSRSGRSIL
Trigger: AAGAATGGATCGCCCACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCCCCAGGCGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS CAA 72 bp TGGTGCGCCTGGGGCTCACTCACGTGCTGCAGCACCTaGCGCGGCAACTTCTCGGAGTGGGCGATCCATTCT +
Preference number: 6 (lower is better)
Translates to: WCAWGSLTCCST*RGNFSEWAIHS
Trigger: AGAATGGATCGCCCACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCCCCAGGCGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS CAA 72 bp CTCTGCACCTGTCCAATGCTGGAGATGGGCCGGATCTaGTCGTGGGCGTTCTCCCTGCAGTGCTCCAGAGCG +
Preference number: 6 (lower is better)
Translates to: LCTCPMLEMGRI*SWAFSLQCSRA
Trigger: CGCTCTGGAGCACTGCAGGGAGAACGCCCACGACAAGATCCGGCCCATCTCCAGCATTGGACAGGTGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS CAA 90 bp GTGCTCTCCTGGTGCGCCTGGGGCTCACTCACGTGCTGCAGCACCTaGCGCGGCAACTTCTCGGAGTGGGCGATCCATTCTTTCATTAAG +
Preference number: 6 (lower is better)
Translates to: VLSWCAWGSLTCCST*RGNFSEWAIHSFIK
Trigger: CTTAATGAAAGAATGGATCGCCCACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGTGAGTGAGCCCCAGGCGCACCAGGAGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS TCA 72 bp CCACGCCGCCGTAGTGGTTCCGGGCCTCGTCACAGCTaGGGTGGTTCACCACATCATGAGGGTATTTTGCTC +
Preference number: 6 (lower is better)
Translates to: PRRRSGSGPRHS*GGSPHHEGILL
Trigger: GAGCAAAATACCCTCATGATGTGGTGAACCACCTCAGCTGTGACGAGGCCCGGAACCACTACGGCGGCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS GCA 72 bp CAGTGCTCCAGAGCGGCGGTGAAGGTGAGCTGCTGCTaGTGGAAGAGCTTGTACTTCTGCTCGATGCTGCGA +
Preference number: 6 (lower is better)
Translates to: QCSRAAVKVSCC*WKSLYFCSMLR
Trigger: TCGCAGCATCGAGCAGAAGTACAAGCTCTTCCAGCAGCAGCAGCTCACCTTCACCGCCGCTCTGGAGCACTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS GCA 72 bp CTGCAGTGCTCCAGAGCGGCGGTGAAGGTGAGCTGCTaGTGCTGGAAGAGCTTGTACTTCTGCTCGATGCTG +
Preference number: 6 (lower is better)
Translates to: LQCSRAAVKVSC*CWKSLYFCSML
Trigger: CAGCATCGAGCAGAAGTACAAGCTCTTCCAGCAGCAGCAGCTCACCTTCACCGCCGCTCTGGAGCACTGCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS GCA 72 bp TCCCTGCAGTGCTCCAGAGCGGCGGTGAAGGTGAGCTaGTGCTGCTGGAAGAGCTTGTACTTCTGCTCGATG +
Preference number: 6 (lower is better)
Translates to: SLQCSRAAVKVS*CCWKSLYFCSM
Trigger: CATCGAGCAGAAGTACAAGCTCTTCCAGCAGCAGCAGCTCACCTTCACCGCCGCTCTGGAGCACTGCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS CCA 72 bp GTTCCATGTAGCTCTGCACCTGTCCAATGCTGGAGATaGGCCGGATCTTGTCGTGGGCGTTCTCCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: VPCSSAPVQCWR*AGSCRGRSPCS
Trigger: ACTGCAGGGAGAACGCCCACGACAAGATCCGGCCCATCTCCAGCATTGGACAGGTGCAGAGCTACATGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS CCA 72 bp GTGACTGGGGTGCCAGAGTGCACGGCCTCAAAGTGCTaGCAGAGCTTATTCAGCTCTGAACAGATGTCCAGG +
Preference number: 6 (lower is better)
Translates to: VTGVPECTASKC*QSLFSSEQMSR
Trigger: CCTGGACATCTGTTCAGAGCTGAATAAGCTCTGCCAGCACTTTGAGGCCGTGCACTCTGGCACCCCAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS CAA 72 bp GCGGCGGTGAAGGTGAGCTGCTGCTGCTGGAAGAGCTaGTACTTCTGCTCGATGCTGCGAAGGGATTCTTTC +
Preference number: 6 (lower is better)
Translates to: AAVKVSCCCWKS*YFCSMLRRDSF
Trigger: GAAAGAATCCCTTCGCAGCATCGAGCAGAAGTACAAGCTCTTCCAGCAGCAGCAGCTCACCTTCACCGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS CAA 90 bp TGCTCCAGAGCGGCGGTGAAGGTGAGCTGCTGCTGCTGGAAGAGCTaGTACTTCTGCTCGATGCTGCGAAGGGATTCTTTCACCTCATTC +
Preference number: 6 (lower is better)
Translates to: CSRAAVKVSCCCWKS*YFCSMLRRDSFTSF
Trigger: GAATGAGGTGAAAGAATCCCTTCGCAGCATCGAGCAGAAGTACAAGCTCTTCCAGCAGCAGCAGCTCACCTTCACCGCCGCTCTGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS GCA 72 bp AATACAGAAGCTAAGTCGTCCCGTGCTGCAGCACCTTaGGCGGCAACTTCTCGGAGTGGGCGATCCATTCTT +
Preference number: 6 (lower is better)
Translates to: NTEAKSSRAAAP*AATSRSGRSIL
Trigger: AAGAATGGATCGCCCACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGGGACGACTTAGCTTCTGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS CCA 72 bp CCGTGCTGCAGCACCTTGCGCGGCAACTTCTCGGAGTaGGCGATCCATTCTTTCATTAAGTCTAGGATGAGG +
Preference number: 6 (lower is better)
Translates to: PCCSTLRGNFSE*AIHSFIKSRMR
Trigger: CCTCATCCTAGACTTAATGAAAGAATGGATCGCCCACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350499.6
CDS CAA 72 bp CTTTGGCTAACGAGGGTTTTGCATTTCTCCAGGAGGTaGTTGGTGACTGGGGTGCCAGAGTGCACGGCCTCA +
Preference number: 6 (lower is better)
Translates to: LWLTRVLHFSRR*LVTGVPECTAS
Trigger: TGAGGCCGTGCACTCTGGCACCCCAGTCACCAACAACCTCCTGGAGAAATGCAAAACCCTCGTTAGCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS CAA 90 bp AAGTCGTTGCTTTGGCTAACGAGGGTTTTGCATTTCTCCAGGAGGTaGTTGGTGACTGGGGTGCCAGAGTGCACGGCCTCAAAGTGCTGG +
Preference number: 6 (lower is better)
Translates to: KSLLWLTRVLHFSRR*LVTGVPECTASKCW
Trigger: CCAGCACTTTGAGGCCGTGCACTCTGGCACCCCAGTCACCAACAACCTCCTGGAGAAATGCAAAACCCTCGTTAGCCAAAGCAACGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS CCA 72 bp ACGTGCTGCAGCACCTTGCGCGGCAACTTCTCGGAGTaGGCGATCCATTCTTTCATTAAGTCTAGGATGAGG +
Preference number: 6 (lower is better)
Translates to: TCCSTLRGNFSE*AIHSFIKSRMR
Trigger: CCTCATCCTAGACTTAATGAAAGAATGGATCGCCCACTCCGAGAAGTTGCCGCGCAAGGTGCTGCAGCACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356311.10
ENST00000372136.7
CDS GCA 72 bp AAGGTGAGCTGCTGCTGCTGGAAGAGCTTGTACTTCTaGTCGATGCTGCGAAGGGATTCTTTCACCTCATTC +
Preference number: 6 (lower is better)
Translates to: KVSCCCWKSLYF*SMLRRDSFTSF
Trigger: GAATGAGGTGAAAGAATCCCTTCGCAGCATCGAGCAGAAGTACAAGCTCTTCCAGCAGCAGCAGCTCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS CCA 72 bp GGGTATTTTGCTCTGAGGCTGCTTAAGTCGTTGCTTTaGCTAACGAGGGTTTTGCATTTCTCCAGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: GYFALRLLKSLL*LTRVLHFSRRL
Trigger: CAACCTCCTGGAGAAATGCAAAACCCTCGTTAGCCAAAGCAACGACTTAAGCAGCCTCAGAGCAAAATACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350499.6
ENST00000356311.10
ENST00000372136.7
CDS CAA 90 bp TGTACTTCTGCTCGATGCTGCGAAGGGATTCTTTCACCTCATTCATaGTCTTCCTCTGTGGTCATTTACAGGAGAAGAGGAATCCGAGCC +
Preference number: 6 (lower is better)
Translates to: CTSARCCEGILSPHS*SSSVVIYRRRGIRA
Trigger: GGCTCGGATTCCTCTTCTCCTGTAAATGACCACAGAGGAAGACAATGAATGAGGTGAAAGAATCCCTTCGCAGCATCGAGCAGAAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372136.7
CDS CAA 90 bp TGTACTTCTGCTCGATGCTGCGAAGGGATTCTTTCACCTCATTCATaGTCTTCCTCTGTGGTCATTTACAGGAGAAGAGGAATCCTTGCT +
Preference number: 6 (lower is better)
Translates to: CTSARCCEGILSPHS*SSSVVIYRRRGILA
Trigger: AGCAAGGATTCCTCTTCTCCTGTAAATGACCACAGAGGAAGACAATGAATGAGGTGAAAGAATCCCTTCGCAGCATCGAGCAGAAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350499.6
ENST00000356311.10