Pregenerated sensors for SPACA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000118434Ensembl transcript IDs: ENST00000237201.2, ENST00000462227.1, ENST00000462690.5
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGATAAAATAGTCCTATCCCCACACTGCATTTCCTTCACACTGTaGCAATCCATCGCAACATTATTAAAGTATTTCAATGTGTATTTT | + |
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Preference number: 1 (lower is better) Translates to: TDKIVLSPHCISFTL*QSIATLLKYFNVYF Trigger: AAAATACACATTGAAATACTTTAATAATGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGACTATTTTATCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| 3UTR CCA 72 bp | ATAGTCCTATCCCCACACTGCATTTCCTTCACACTGTaGCAATCCATCGCAACATTATTAAAGTATTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: IVLSPHCISFTL*QSIATLLKYFN Trigger: ATTGAAATACTTTAATAATGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR TCA 90 bp | ATAGTCCTATCCCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACACCTGGACGGCAGCGGTaGCGTTGGTCCCGCGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: IVLSPHCISFTLWQSIATPGRQR*RWSRAR Trigger: CCGCGCGCGGGACCAACGTCACCGCTGCCGTCCAGG...TGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGACTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CCA 90 bp | AAATGCACTGATAAAATAGTCCTATCCCCACACTGCATTTCCTTCACACTGTGGTCGCCCTCGCCTTCGTaGGCCAGGCCGGCATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KCTDKIVLSPHCISFTLWSPSPS*ARPASW Trigger: CCAGGATGCCGGCCTGGCCCACGAAGGCGAGGGCGA...CCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGACTATTTTATCAGTGCATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CCA 90 bp | AAATGCACTGATAAAATAGTCCTATCCCCACACTGCATTTCCTTCACACTGTGGAGCAGCCCGTGCCCCTaGGGCTCATGGTTCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: KCTDKIVLSPHCISFTLWSSPCP*GSWFSA Trigger: GGCCGAGAACCATGAGCCCCAGGGGCACGGGCTGCT...CCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGACTATTTTATCAGTGCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CCA 90 bp | CCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACATTATTAAAGTAGCCAGGCCGGCATCCTaGACGGCAGCGGTGACGTTG | + |
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Preference number: 4 (lower is better) Translates to: PTLHFLHTVAIHRNIIKVARPAS*TAAVTL Trigger: CAACGTCACCGCTGCCGTCCAGGATGCCGGCCTGGC...TACTTTAATAATGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CCA 90 bp | CATTTCCTTCACACTGTGGCAATCCATCGCAACATTATTAAAGTATTTCAATGTGTCCCGCGCGCGGACTaGAGGCCCGCCAGAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HFLHTVAIHRNIIKVFQCVPRAD*RPARSS Trigger: GCTGCTTCTGGCGGGCCTCCAGTCCGCGCGCGGGAC...ACATTGAAATACTTTAATAATGTTGCGATGGATTGCCACAGTGTGAAGGAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR GCA 90 bp | GTCCTATCCCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACATTAGTCCTATCCCCACACTaGATTTCCTTCACACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: VLSPHCISFTLWQSIATLVLSPH*ISFTLW Trigger: CCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGAC...TAATGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR GCA 90 bp | ATAGTCCTATCCCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACAGCAAGTTCAACCCAGTaGTTCCAGGGGAGAGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: IVLSPHCISFTLWQSIATASSTQ*FQGRES Trigger: ACTTTCTCTCCCCTGGAAGCACTGGGTTGAACTTGC...TGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR GCA 90 bp | ATAGTCCTATCCCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACAAGGGGTGACTTTCCTTaGGTACTTCTAGGATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: IVLSPHCISFTLWQSIATRGDFP*VLLGLL Trigger: CAGCAATCCTAGAAGTACGCAAGGAAAGTCACCCCT...TGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR TCA 90 bp | ATAGTCCTATCCCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACAGACGACATTCCTATTTaGAACATCCTCGGTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: IVLSPHCISFTLWQSIATDDIPI*NILGFR Trigger: CCTGAAACCGAGGATGTTTCAAATAGGAATGTCGTC...TGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR TCA 90 bp | GTCCTATCCCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACATTAACTTTCAAGACTTTCTaGAATTGGTTTACCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VLSPHCISFTLWQSIATLTFKTF*NWFTPA Trigger: GGCTGGGGTAAACCAATTTCAGAAAGTCTTGAAAGT...TAATGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR GCA 90 bp | TCCTATCCCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACATTATTATCTCACAGAACTCTaGTCGGATTGTACCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SYPHTAFPSHCGNPSQHYYLTEL*SDCTSG Trigger: ACCTGAGGTACAATCCGAGCAGAGTTCTGTGAGATA...ATAATGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CCA 90 bp | TTTACTTTAGCAAGTTCAACCCAGTGCTTCCAGGGGAGAGAAAGTCTAATATGTCCCGTACAACACACTTaGATTCACCACCAGGGCATC | + |
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Preference number: 4 (lower is better) Translates to: FTLASSTQCFQGRESLICPVQHT*IHHQGI Trigger: GATGCCCTGGTGGTGAATCCAAGTGTGTTGTACGGG...ACATATTAGACTTTCTCTCCCCTGGAAGCACTGGGTTGAACTTGCTAAAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CCA 90 bp | CCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACATTATTAAAGTACCAGCCACAATCTGTTaGTCCACGGCATTCTTCTAC | + |
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Preference number: 4 (lower is better) Translates to: PTLHFLHTVAIHRNIIKVPATIC*STAFFY Trigger: GTAGAAGAATGCCGTGGACCAACAGATTGTGGCTGG...TACTTTAATAATGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CCA 90 bp | CCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACATTATTAAAGTATTAGGGCTGCATCAGTaGCTGGTAGGCTTGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: PTLHFLHTVAIHRNIIKVLGLHQ*LVGLIF Trigger: GAAGATCAAGCCTACCAGCCACTGATGCAGCCCTAA...TACTTTAATAATGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR TCA 90 bp | TTTACTTTAGCAAGTTCAACCCAGTGCTTCCAGGGGAGAGAAAGTCTAATATGTTCGAAAGCCAAGGGGTaGCTTTCCTTGCGTACTTCT | + |
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Preference number: 4 (lower is better) Translates to: FTLASSTQCFQGRESLICSKAKG*LSLRTS Trigger: AGAAGTACGCAAGGAAAGTCACCCCTTGGCTTTCGA...ACATATTAGACTTTCTCTCCCCTGGAAGCACTGGGTTGAACTTGCTAAAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CCA 90 bp | ATAGTCCTATCCCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACAATTTCCTTCACACTGTaGCAATCCATCGCAACATTA | + |
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Preference number: 4 (lower is better) Translates to: IVLSPHCISFTLWQSIATISFTL*QSIATL Trigger: TAATGTTGCGATGGATTGCCACAGTGTGAAGGAAAT...TGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR TCA 90 bp | TTTACTTTAGCAAGTTCAACCCAGTGCTTCCAGGGGAGAGAAAGTCTAATATGTTTTAAGGGAGATGTGTaGATACATGCCAATCTAACA | + |
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Preference number: 4 (lower is better) Translates to: FTLASSTQCFQGRESLICFKGDV*IHANLT Trigger: TGTTAGATTGGCATGTATTCACACATCTCCCTTAAA...ACATATTAGACTTTCTCTCCCCTGGAAGCACTGGGTTGAACTTGCTAAAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR GCA 90 bp | TTTACTTTAGCAAGTTCAACCCAGTGCTTCCAGGGGAGAGAAAGTCTAATATGTGAAAGCCTTGACTGCTaGCCAATTTATGATTATGAA | + |
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Preference number: 4 (lower is better) Translates to: FTLASSTQCFQGRESLICESLDC*PIYDYE Trigger: TTCATAATCATAAATTGGGCAGCAGTCAAGGCTTTC...ACATATTAGACTTTCTCTCCCCTGGAAGCACTGGGTTGAACTTGCTAAAGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS TCA 90 bp | CGCCCTCGCCTTCGTGGGCCAGGCCGGCATCCTGGACGGCAGCGGTaGCGTTGGTCCCGCGCGCGGACTGGAGGCCCGCCAGAAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: RPRLRGPGRHPGRQR*RWSRARTGGPPEAA Trigger: GGCTGCTTCTGGCGGGCCTCCAGTCCGCGCGCGGGACCAACGTCACCGCTGCCGTCCAGGATGCCGGCCTGGCCCACGAAGGCGAGGGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS CCA 90 bp | GCCAGCCGACAGTCATCAGCAGCCCGGCGGAGCAGCCCGTGCCCCTaGGGCTCATGGTTCTCGGCCCCGACGGCCGTCCGAGGCGCAGTC | + |
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Preference number: 5 (lower is better) Translates to: ASRQSSAARRSSPCP*GSWFSAPTAVRGAV Trigger: GACTGCGCCTCGGACGGCCGTCGGGGCCGAGAACCATGAGCCCCAGGGGCACGGGCTGCTCCGCCGGGCTGCTGATGACTGTCGGCTGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS CCA 90 bp | TCGGTCTCCTCCTCGCCCTCGCCTTCGTGGGCCAGGCCGGCATCCTaGACGGCAGCGGTGACGTTGGTCCCGCGCGCGGACTGGAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: SVSSSPSPSWARPAS*TAAVTLVPRADWRP Trigger: GGGCCTCCAGTCCGCGCGCGGGACCAACGTCACCGCTGCCGTCCAGGATGCCGGCCTGGCCCACGAAGGCGAGGGCGAGGAGGAGACCGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS GCA 90 bp | GAAGCAGCCAGCCGACAGTCATCAGCAGCCCGGCGGAGCAGCCCGTaGCCCTGGGGCTCATGGTTCTCGGCCCCGACGGCCGTCCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: EAASRQSSAARRSSP*PWGSWFSAPTAVRG Trigger: GCCTCGGACGGCCGTCGGGGCCGAGAACCATGAGCCCCAGGGGCACGGGCTGCTCCGCCGGGCTGCTGATGACTGTCGGCTGGCTGCTTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS CCA 90 bp | CCGGCATCCTGGACGGCAGCGGTGACGTTGGTCCCGCGCGCGGACTaGAGGCCCGCCAGAAGCAGCCAGCCGACAGTCATCAGCAGCCCG | + |
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Preference number: 5 (lower is better) Translates to: PASWTAAVTLVPRAD*RPARSSQPTVISSP Trigger: CGGGCTGCTGATGACTGTCGGCTGGCTGCTTCTGGCGGGCCTCCAGTCCGCGCGCGGGACCAACGTCACCGCTGCCGTCCAGGATGCCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS CCA 90 bp | GTCTCGCTGTCGTTGTTTTCGGTCTCCTCCTCGCCCTCGCCTTCGTaGGCCAGGCCGGCATCCTGGACGGCAGCGGTGACGTTGGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: VSLSLFSVSSSPSPS*ARPASWTAAVTLVP Trigger: CGGGACCAACGTCACCGCTGCCGTCCAGGATGCCGGCCTGGCCCACGAAGGCGAGGGCGAGGAGGAGACCGAAAACAACGACAGCGAGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CAA 90 bp | CCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACATTATTAAAGTAACGGCAGCGGTGACGTaGGTCCCGCGCGCGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: PTLHFLHTVAIHRNIIKVTAAVT*VPRADW Trigger: CCAGTCCGCGCGCGGGACCAACGTCACCGCTGCCGT...TACTTTAATAATGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CAA 90 bp | ATAGTCCTATCCCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACACCCAGCCACAATCTGTaGGTCCACGGCATTCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: IVLSPHCISFTLWQSIATPSHNL*VHGILL Trigger: TAGAAGAATGCCGTGGACCAACAGATTGTGGCTGGG...TGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CAA 90 bp | CATTTCCTTCACACTGTGGCAATCCATCGCAACATTATTAAAGTATTTCAATGTGCGGTCTCGCTGTCGTaGTTTTCGGTCTCCTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: HFLHTVAIHRNIIKVFQCAVSLS*FSVSSS Trigger: CGAGGAGGAGACCGAAAACAACGACAGCGAGACCGC...ACATTGAAATACTTTAATAATGTTGCGATGGATTGCCACAGTGTGAAGGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CAA 90 bp | TTTACTTTAGCAAGTTCAACCCAGTGCTTCCAGGGGAGAGAAAGTCTAATATGTACCCGTACAACACACTaGGATTCACCACCAGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: FTLASSTQCFQGRESLICTRTTH*DSPPGH Trigger: ATGCCCTGGTGGTGAATCCAAGTGTGTTGTACGGGT...ACATATTAGACTTTCTCTCCCCTGGAAGCACTGGGTTGAACTTGCTAAAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CAA 90 bp | TTTACTTTAGCAAGTTCAACCCAGTGCTTCCAGGGGAGAGAAAGTCTAATATGTAGAACTCTGCTCGGATaGTACCTCAGGTGTAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: FTLASSTQCFQGRESLICRTLLG*YLRCRG Trigger: GCCTCTACACCTGAGGTACAATCCGAGCAGAGTTCT...ACATATTAGACTTTCTCTCCCCTGGAAGCACTGGGTTGAACTTGCTAAAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CAA 90 bp | ATAGTCCTATCCCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACACCGAATTCTACTTCTTaGACGACATTCCTATTTGAA | + |
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Preference number: 5 (lower is better) Translates to: IVLSPHCISFTLWQSIATPNSTS*TTFLFE Trigger: TTCAAATAGGAATGTCGTCAAAGAAGTAGAATTCGG...TGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CAA 90 bp | TCCTATCCCCACACTGCATTTCCTTCACACTGTGGCAATCCATCGCAACATTATATTGGTCAAGAGAAGTaGAATCTTTGTATCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: SYPHTAFPSHCGNPSQHYIGQEK*NLCISQ Trigger: CTGTGAGATACAAAGATTCAACTTCTCTTGACCAAT...ATAATGTTGCGATGGATTGCCACAGTGTGAAGGAAATGCAGTGTGGGGATAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS TCA 90 bp | ACTATTTCATTATTATCCAGTGTGTCACACTCGAAAGCCAAGGGGTaGCTTTCCTTGCGTACTTCTAGGATTGCTGAATCATTTACAAGT | + |
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Preference number: 5 (lower is better) Translates to: TISLLSSVSHSKAKG*LSLRTSRIAESFTS Trigger: ACTTGTAAATGATTCAGCAATCCTAGAAGTACGCAAGGAAAGTCACCCCTTGGCTTTCGAGTGTGACACACTGGATAATAATGAAATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000237201.2 ENST00000462227.1 ENST00000462690.5 |
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| CDS CCA 90 bp | CATTCACTTAAAGCATCATCTTCACCAGGCATTTCTGTTGGTAATTaGTCAAGAGAAGTTGAATCTTTGTATCTCACAGAACTCTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: HSLKASSSPGISVGN*SREVESLYLTELCS Trigger: CGAGCAGAGTTCTGTGAGATACAAAGATTCAACTTCTCTTGACCAATTACCAACAGAAATGCCTGGTGAAGATGATGCTTTAAGTGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000237201.2 ENST00000462227.1 ENST00000462690.5 |
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| CDS-3UTR CAA 90 bp | TTTACTTTAGCAAGTTCAACCCAGTGCTTCCAGGGGAGAGAAAGTCTAATATGTAGAGAAGTTGAATCTTaGTATCTCACAGAACTCTGC | + |
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Preference number: 5 (lower is better) Translates to: FTLASSTQCFQGRESLICREVES*YLTELC Trigger: GCAGAGTTCTGTGAGATACAAAGATTCAACTTCTCT...ACATATTAGACTTTCTCTCCCCTGGAAGCACTGGGTTGAACTTGCTAAAGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CAA 90 bp | TTTACTTTAGCAAGTTCAACCCAGTGCTTCCAGGGGAGAGAAAGTCTAATATGTATGCACTTAGAAGATTaGTTGGGGGTACCTTTAGAT | + |
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Preference number: 5 (lower is better) Translates to: FTLASSTQCFQGRESLICMHLED*LGVPLD Trigger: ATCTAAAGGTACCCCCAACAAATCTTCTAAGTGCAT...ACATATTAGACTTTCTCTCCCCTGGAAGCACTGGGTTGAACTTGCTAAAGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CAA 90 bp | CATTTCCTTCACACTGTGGCAATCCATCGCAACATTATTAAAGTATTTCAATGTTGCGTACTTCTAGGATaGCTGAATCATTTACAAGTA | + |
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Preference number: 5 (lower is better) Translates to: HFLHTVAIHRNIIKVFQCCVLLG*LNHLQV Trigger: TACTTGTAAATGATTCAGCAATCCTAGAAGTACGCA...ACATTGAAATACTTTAATAATGTTGCGATGGATTGCCACAGTGTGAAGGAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS-3UTR CAA 90 bp | CATTTCCTTCACACTGTGGCAATCCATCGCAACATTATTAAAGTATTTCAATGTCATGTCTTACAAACTTaGTATGTCACATTCCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: HFLHTVAIHRNIIKVFQCHVLQT*YVTFPE Trigger: TTCAGGGAATGTGACATACAAAGTTTGTAAGACATG...ACATTGAAATACTTTAATAATGTTGCGATGGATTGCCACAGTGTGAAGGAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS TCA 72 bp | CTTCGTGGGCCAGGCCGGCATCCTGGACGGCAGCGGTaGCGTTGGTCCCGCGCGCGGACTGGAGGCCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: LRGPGRHPGRQR*RWSRARTGGPP Trigger: TGGCGGGCCTCCAGTCCGCGCGCGGGACCAACGTCACCGCTGCCGTCCAGGATGCCGGCCTGGCCCACGAAG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS CCA 72 bp | TCCTCGCCCTCGCCTTCGTGGGCCAGGCCGGCATCCTaGACGGCAGCGGTGACGTTGGTCCCGCGCGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: SSPSPSWARPAS*TAAVTLVPRAD Trigger: GTCCGCGCGCGGGACCAACGTCACCGCTGCCGTCCAGGATGCCGGCCTGGCCCACGAAGGCGAGGGCGAGGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS CAA 72 bp | TGGGCCAGGCCGGCATCCTGGACGGCAGCGGTGACGTaGGTCCCGCGCGCGGACTGGAGGCCCGCCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: WARPASWTAAVT*VPRADWRPARS Trigger: GCTTCTGGCGGGCCTCCAGTCCGCGCGCGGGACCAACGTCACCGCTGCCGTCCAGGATGCCGGCCTGGCCCA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS CAA 90 bp | TCGCCTTCGTGGGCCAGGCCGGCATCCTGGACGGCAGCGGTGACGTaGGTCCCGCGCGCGGACTGGAGGCCCGCCAGAAGCAGCCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: SPSWARPASWTAAVT*VPRADWRPARSSQP Trigger: CGGCTGGCTGCTTCTGGCGGGCCTCCAGTCCGCGCGCGGGACCAACGTCACCGCTGCCGTCCAGGATGCCGGCCTGGCCCACGAAGGCGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS GCA 72 bp | AGCCGACAGTCATCAGCAGCCCGGCGGAGCAGCCCGTaGCCCTGGGGCTCATGGTTCTCGGCCCCGACGGCC | + |
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Preference number: 6 (lower is better) Translates to: SRQSSAARRSSP*PWGSWFSAPTA Trigger: GGCCGTCGGGGCCGAGAACCATGAGCCCCAGGGGCACGGGCTGCTCCGCCGGGCTGCTGATGACTGTCGGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS CCA 72 bp | CAGTCATCAGCAGCCCGGCGGAGCAGCCCGTGCCCCTaGGGCTCATGGTTCTCGGCCCCGACGGCCGTCCGA | + |
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Preference number: 6 (lower is better) Translates to: QSSAARRSSPCP*GSWFSAPTAVR Trigger: TCGGACGGCCGTCGGGGCCGAGAACCATGAGCCCCAGGGGCACGGGCTGCTCCGCCGGGCTGCTGATGACTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS CCA 72 bp | TGGACGGCAGCGGTGACGTTGGTCCCGCGCGCGGACTaGAGGCCCGCCAGAAGCAGCCAGCCGACAGTCATC | + |
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Preference number: 6 (lower is better) Translates to: WTAAVTLVPRAD*RPARSSQPTVI Trigger: GATGACTGTCGGCTGGCTGCTTCTGGCGGGCCTCCAGTCCGCGCGCGGGACCAACGTCACCGCTGCCGTCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS CCA 72 bp | CTCCTATGGTCAGCACAAAAATTAGGGCTGCATCAGTaGCTGGTAGGCTTGATCTTCTCATCTGCAATTCAC | + |
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Preference number: 6 (lower is better) Translates to: LLWSAQKLGLHQ*LVGLIFSSAIH Trigger: GTGAATTGCAGATGAGAAGATCAAGCCTACCAGCCACTGATGCAGCCCTAATTTTTGTGCTGACCATAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS CAA 72 bp | GACTTTCTGAAATTGGTTTACCCCAGCCACAATCTGTaGGTCCACGGCATTCTTCTACCCGTACAACACACT | + |
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Preference number: 6 (lower is better) Translates to: DFLKLVYPSHNL*VHGILLPVQHT Trigger: AGTGTGTTGTACGGGTAGAAGAATGCCGTGGACCAACAGATTGTGGCTGGGGTAAACCAATTTCAGAAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS CCA 72 bp | CTCCTATGGTCAGCACAAAAATTAGGGCTGCATCAGTaGCTGGTAGGCTTGATCTTCTCATCTGCAATTCTA | + |
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Preference number: 6 (lower is better) Translates to: LLWSAQKLGLHQ*LVGLIFSSAIL Trigger: TAGAATTGCAGATGAGAAGATCAAGCCTACCAGCCACTGATGCAGCCCTAATTTTTGTGCTGACCATAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462227.1 |
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| CDS CAA 72 bp | GTTGGTCCACGGCATTCTTCTACCCGTACAACACACTaGGATTCACCACCAGGGCATCCATTTGTTAATATA | + |
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Preference number: 6 (lower is better) Translates to: VGPRHSSTRTTH*DSPPGHPFVNI Trigger: TATATTAACAAATGGATGCCCTGGTGGTGAATCCAAGTGTGTTGTACGGGTAGAAGAATGCCGTGGACCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS CAA 72 bp | GCACAAAAATTAGGGCTGCATCAGTGGCTGGTAGGCTaGATCTTCTCATCTGCAATTCACTGCTCGTATAGA | + |
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Preference number: 6 (lower is better) Translates to: AQKLGLHQWLVG*IFSSAIHCSYR Trigger: TCTATACGAGCAGTGAATTGCAGATGAGAAGATCAAGCCTACCAGCCACTGATGCAGCCCTAATTTTTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS CAA 90 bp | CCACAATCTGTTGGTCCACGGCATTCTTCTACCCGTACAACACACTaGGATTCACCACCAGGGCATCCATTTGTTAATATAACTTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: PQSVGPRHSSTRTTH*DSPPGHPFVNITSL Trigger: TAGAGAAGTTATATTAACAAATGGATGCCCTGGTGGTGAATCCAAGTGTGTTGTACGGGTAGAAGAATGCCGTGGACCAACAGATTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237201.2 |
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| CDS TCA 72 bp | TTATTATCCAGTGTGTCACACTCGAAAGCCAAGGGGTaGCTTTCCTTGCGTACTTCTAGGATTGCTGAATCA | + |
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Preference number: 6 (lower is better) Translates to: LLSSVSHSKAKG*LSLRTSRIAES Trigger: TGATTCAGCAATCCTAGAAGTACGCAAGGAAAGTCACCCCTTGGCTTTCGAGTGTGACACACTGGATAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000237201.2 ENST00000462227.1 ENST00000462690.5 |
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| CDS GCA 72 bp | GTGTGTCACACTCGAAAGCCAAGGGGTGACTTTCCTTaGGTACTTCTAGGATTGCTGAATCATTTACAAGTA | + |
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Preference number: 6 (lower is better) Translates to: VCHTRKPRGDFP*VLLGLLNHLQV Trigger: TACTTGTAAATGATTCAGCAATCCTAGAAGTACGCAAGGAAAGTCACCCCTTGGCTTTCGAGTGTGACACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000237201.2 ENST00000462227.1 ENST00000462690.5 |
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| CDS GCA 72 bp | TCAAGAGAAGTTGAATCTTTGTATCTCACAGAACTCTaGTCGGATTGTACCTCAGGTGTAGAGGCTTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: SREVESLYLTEL*SDCTSGVEAFA Trigger: GGCAAAAGCCTCTACACCTGAGGTACAATCCGAGCAGAGTTCTGTGAGATACAAAGATTCAACTTCTCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000237201.2 ENST00000462227.1 ENST00000462690.5 |
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| CDS CAA 72 bp | GCACAAAAATTAGGGCTGCATCAGTGGCTGGTAGGCTaGATCTTCTCATCTGCAATTCTAGAGAAAACACAC | + |
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Preference number: 6 (lower is better) Translates to: AQKLGLHQWLVG*IFSSAILEKTH Trigger: GTGTGTTTTCTCTAGAATTGCAGATGAGAAGATCAAGCCTACCAGCCACTGATGCAGCCCTAATTTTTGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462227.1 |
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| CDS CAA 90 bp | TCACCAGGCATTTCTGTTGGTAATTGGTCAAGAGAAGTTGAATCTTaGTATCTCACAGAACTCTGCTCGGATTGTACCTCAGGTGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: SPGISVGNWSREVES*YLTELCSDCTSGVE Trigger: CTCTACACCTGAGGTACAATCCGAGCAGAGTTCTGTGAGATACAAAGATTCAACTTCTCTTGACCAATTACCAACAGAAATGCCTGGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000237201.2 ENST00000462227.1 ENST00000462690.5 |
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| CDS CAA 72 bp | ATTTCTGTTGGTAATTGGTCAAGAGAAGTTGAATCTTaGTATCTCACAGAACTCTGCTCGGATTGTACCTCA | + |
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Preference number: 6 (lower is better) Translates to: ISVGNWSREVES*YLTELCSDCTS Trigger: TGAGGTACAATCCGAGCAGAGTTCTGTGAGATACAAAGATTCAACTTCTCTTGACCAATTACCAACAGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000237201.2 ENST00000462227.1 ENST00000462690.5 |
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