RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SP6 (Homo sapiens)

Ensembl gene IDs: ENSG00000189120

Ensembl transcript IDs: ENST00000342234.3, ENST00000536300.2

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAAGGGACCCCGCCGCAGGGCGGCTCCGGAGGCGCTTTTATGTCCTaGTTCCCAGGCGCTAAGGACGTGTCCAGACAGCCACCACCAGCG +
Preference number: 1 (lower is better)
Translates to: KGTPPQGGSGGAFMS*FPGAKDVSRQPPPA
Trigger: CGCTGGTGGTGGCTGTCTGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGCCTCCGGAGCCGCCCTGCGGCGGGGTCCCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR CCA 90 bp GGCCCCTCTCTTGAGTGTGGGAAAGCCCTCCGGCTGCAAGGGCTGTaGCCTGTCAGACCCTTCCTCATATCAGCTTCTTTCCCCTCTGCC +
Preference number: 1 (lower is better)
Translates to: GPSLECGKALRLQGL*PVRPFLISASFPSA
Trigger: GGCAGAGGGGAAAGAAGCTGATATGAGGAAGGGTCTGACAGGCCACAGCCCTTGCAGCCGGAGGGCTTTCCCACACTCAAGAGAGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR CCA 90 bp AGGCTGTCTTGGTGGCACAGGGAAGGGGTGGCTGGTTTCGATGGGTaGAGGAGAAAGGCATCTTACACCCACGGTGCCCTTCCTCTTTCC +
Preference number: 1 (lower is better)
Translates to: RLSWWHREGVAGFDG*RRKASYTHGALPLS
Trigger: GGAAAGAGGAAGGGCACCGTGGGTGTAAGATGCCTTTCTCCTCCACCCATCGAAACCAGCCACCCCTTCCCTGTGCCACCAAGACAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR GCA 90 bp AGGGACTGTAAGGCCCCTCTCTTGAGTGTGGGAAAGCCCTCCGGCTaGAAGGGCTGTGGCCTGTCAGACCCTTCCTCATATCAGCTTCTT +
Preference number: 1 (lower is better)
Translates to: RDCKAPLLSVGKPSG*KGCGLSDPSSYQLL
Trigger: AAGAAGCTGATATGAGGAAGGGTCTGACAGGCCACAGCCCTTGCAGCCGGAGGGCTTTCCCACACTCAAGAGAGGGGCCTTACAGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR TCA 90 bp CAATCTGCCCTCAACCAGCCCAAGAAACCCTCTTCCTTCCATCCCTaGGGGGAAGGCAACTGGTGGGAACTACATGGATTCTACCGCTGG +
Preference number: 1 (lower is better)
Translates to: QSALNQPKKPSSFHP*GEGNWWELHGFYRW
Trigger: CCAGCGGTAGAATCCATGTAGTTCCCACCAGTTGCCTTCCCCTCAGGGATGGAAGGAAGAGGGTTTCTTGGGCTGGTTGAGGGCAGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR CCA 90 bp TATCCAAAGCCTCTACCCGCATACCTCAGAGCTTGGGGCTTCCATTaGGGGGAGCATCTGTGTCCACCAGCAACACCCATTTGGGAGTTC +
Preference number: 1 (lower is better)
Translates to: YPKPLPAYLRAWGFH*GEHLCPPATPIWEF
Trigger: GAACTCCCAAATGGGTGTTGCTGGTGGACACAGATGCTCCCCCCAATGGAAGCCCCAAGCTCTGAGGTATGCGGGTAGAGGCTTTGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR TCA 90 bp AAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTTTCTTGGTaGCAGCTAAAGAGATGGTCAGGTAGGCTGCAGGCCTCCACTCTG +
Preference number: 1 (lower is better)
Translates to: KTRAKLERQWGLFSW*QLKRWSGRLQASTL
Trigger: CAGAGTGGAGGCCTGCAGCCTACCTGACCATCTCTTTAGCTGTCACCAAGAAAATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR GCA 90 bp GCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCAGACAGCCACCACGGGGCTCGCATCCAGTaGCCCCCGGGATACCCGCAG +
Preference number: 2 (lower is better)
Translates to: ALLCPGSQALRTCPDSHHGARIQ*PPGYPQ
Trigger: CTGCGGGTATCCCGGGGGGCACTGGATGCGAGCCCC...GTGGTGGCTGTCTGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR GCA 90 bp CAATACACAGCTAATCTCTGCAGAGGGCTCCGGGTGAAGAAAGGGAGCGAGGGGGGGGCTCGCATCCAGTaGCCCCCGGGATACCCGCAG +
Preference number: 2 (lower is better)
Translates to: QYTANLCRGLRVKKGSEGGARIQ*PPGYPQ
Trigger: CTGCGGGTATCCCGGGGGGCACTGGATGCGAGCCCC...CCCCTCGCTCCCTTTCTTCACCCGGAGCCCTCTGCAGAGATTAGCTGTGTATTG
63% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp CCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCTGGGCCCAGATCCCAAGGACGTCAGACCTaGGGGCTCGCATCCAGTGCC +
Preference number: 2 (lower is better)
Translates to: PWLGSSIYKGGRDAGPRSQGRQT*GLASSA
Trigger: GGCACTGGATGCGAGCCCCCAGGTCTGACGTCCTTG...GGATCTGGGCCCAGCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR CAA 90 bp TCCCACCCAGATCCCAGCCCCCACTTCCCATATAGCTCCCAGACCTaGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: SHPDPSPHFPYSSQT*AGLQHLQRRKRCWA
Trigger: GGCCCAGCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAGCTATATGGGAAGTGGGGGCTGGGATCTGGGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR GCA 90 bp GGAGAAGGGAATGGGGACAGCTTCCTGGATGTCACCTCAGAAGGCAGAACCCCTGGCCCCACTTCTCTCTaGTCCGGGGACTGGGACTTG +
Preference number: 2 (lower is better)
Translates to: GEGNGDSFLDVTSEGRTPGPTSL*SGDWDL
Trigger: CAAGTCCCAGTCCCCGGAGCAGAGAGAAGTGGGGCC...AGGGGTTCTGCCTTCTGAGGTGACATCCAGGAAGCTGTCCCCATTCCCTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp CAATACACAGCTAATCTCTGCAGAGGGCTCCGGGTGAAGAAAGGGAGCGAGGGGATCGCCAGCCCTGGCTaGGAGGCTGTCAGGAATGGC +
Preference number: 2 (lower is better)
Translates to: QYTANLCRGLRVKKGSEGIASPG*EAVRNG
Trigger: GCCATTCCTGACAGCCTCCCAGCCAGGGCTGGCGAT...CCCCTCGCTCCCTTTCTTCACCCGGAGCCCTCTGCAGAGATTAGCTGTGTATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR TCA 90 bp CAATACACAGCTAATCTCTGCAGAGGGCTCCGGGTGAAGAAAGGGAGCGAGGGGTGCAGGCCTCCACTCTaGGTGGGAACCAGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: QYTANLCRGLRVKKGSEGCRPPL*VGTSGG
Trigger: ACCTCCACTGGTTCCCACTCAGAGTGGAGGCCTGCA...CCCCTCGCTCCCTTTCTTCACCCGGAGCCCTCTGCAGAGATTAGCTGTGTATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp CTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTCCCCAAGGACGTCAGACCTaGGGGCTCGCATCCAGTGCC +
Preference number: 2 (lower is better)
Translates to: LRRQNPFQWENNSFLSLPQGRQT*GLASSA
Trigger: GGCACTGGATGCGAGCCCCCAGGTCTGACGTCCTTG...GGGAAGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp GCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCAGACAGCCACCACCTCTGCTCCGGGGACTaGGACTTGCTGTCTCCTCTA +
Preference number: 2 (lower is better)
Translates to: ALLCPGSQALRTCPDSHHLCSGD*DLLSPL
Trigger: TAGAGGAGACAGCAAGTCCCAGTCCCCGGAGCAGAG...GTGGTGGCTGTCTGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR GCA 90 bp CTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTCCCAGAACAGAGGGGCATTaGGCAGCTCCTACCGACCCA +
Preference number: 2 (lower is better)
Translates to: LRRQNPFQWENNSFLSLPRTEGH*AAPTDP
Trigger: TGGGTCGGTAGGAGCTGCGCAATGCCCCTCTGTTCT...GGGAAGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR GCA 90 bp CAATACACAGCTAATCTCTGCAGAGGGCTCCGGGTGAAGAAAGGGAGCGAGGGGGAGACACCCCCAATCTaGCCTCAACCAGCCCAAGAA +
Preference number: 2 (lower is better)
Translates to: QYTANLCRGLRVKKGSEGETPPI*PQPAQE
Trigger: TTCTTGGGCTGGTTGAGGGCAGATTGGGGGTGTCTC...CCCCTCGCTCCCTTTCTTCACCCGGAGCCCTCTGCAGAGATTAGCTGTGTATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR GCA 90 bp GAGGGGAGCAGAAGAAAACCTATCCAAAGCCTCTACCCGCATACCTCAGAGCTTGGAAAGCCCTCCGGCTaGAAGGGCTGTGGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: EGSRRKPIQSLYPHTSELGKPSG*KGCGLS
Trigger: TGACAGGCCACAGCCCTTGCAGCCGGAGGGCTTTCC...AAGCTCTGAGGTATGCGGGTAGAGGCTTTGGATAGGTTTTCTTCTGCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp GACTGCCTAGAAAGACAGGCAGCCAAGCAGCCTAGATCTATAAAAGAGGGGAGCATCGCCAGCCCTGGCTaGGAGGCTGTCAGGAATGGC +
Preference number: 2 (lower is better)
Translates to: DCLERQAAKQPRSIKEGSIASPG*EAVRNG
Trigger: GCCATTCCTGACAGCCTCCCAGCCAGGGCTGGCGAT...GCTCCCCTCTTTTATAGATCTAGGCTGCTTGGCTGCCTGTCTTTCTAGGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp GGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATACCCCACCAACTTTATCGCCAGCCCTaGCTGGGAGGCTGTCAGGAA +
Preference number: 2 (lower is better)
Translates to: GLNQRWRGKGLVPSIPHQLYRQP*LGGCQE
Trigger: TTCCTGACAGCCTCCCAGCCAGGGCTGGCGATAAAG...TTGGTGGGGTATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTGGCCTCCACTCTGAGTaGGAACCAGTGGAGGTCCCT +
Preference number: 2 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPGLHSE*EPVEVP
Trigger: AGGGACCTCCACTGGTTCCCACTCAGAGTGGAGGCC...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR TCA 90 bp CCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCTGGGCCCAGATCCCCAAGAATTAAGGGCTaGATCAGAGGTGGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: PWLGSSIYKGGRDAGPRSPRIKG*IRGGEG
Trigger: TCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTGG...GGATCTGGGCCCAGCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR TCA 90 bp TATAGCTCCCAGACCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCTCTTCCTTCCATCCCTaGGGGGAAGGCAACTGGTGG +
Preference number: 2 (lower is better)
Translates to: YSSQTLAGLQHLQRRKRCSSFHP*GEGNWW
Trigger: CCACCAGTTGCCTTCCCCTCAGGGATGGAAGGAAGA...GCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAGCTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTCTCTGCTCCGGGGACTaGGACTTGCTGTCTCCTCTA +
Preference number: 2 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPLCSGD*DLLSPL
Trigger: TAGAGGAGACAGCAAGTCCCAGTCCCCGGAGCAGAG...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp TGCCCCCAACCCTCTCAGCAAGGAAGGGGATCTCTGGTTGGGTTAGCAGGAGGTTTCCCTCTTCCTTCATaGCTCCAACAGACTGGGTCT +
Preference number: 2 (lower is better)
Translates to: CPQPSQQGRGSLVGLAGGFPLPS*LQQTGS
Trigger: AGACCCAGTCTGTTGGAGCCATGAAGGAAGAGGGAA...ACCTCCTGCTAACCCAACCAGAGATCCCCTTCCTTGCTGAGAGGGTTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp CCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCTGGGCCCAGATCCTTCCCTCTTCCTTCATaGCTCCAACAGACTGGGTCT +
Preference number: 2 (lower is better)
Translates to: PWLGSSIYKGGRDAGPRSFPLPS*LQQTGS
Trigger: AGACCCAGTCTGTTGGAGCCATGAAGGAAGAGGGAA...GGATCTGGGCCCAGCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp CCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCTGGGCCCAGATCCCAGAACCCCTTCCAGTaGGAGAACAACTCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: PWLGSSIYKGGRDAGPRSQNPFQ*ENNSFL
Trigger: GAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTG...GGATCTGGGCCCAGCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp TATAGCTCCCAGACCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCCTGGTGGGAACTACATaGATTCTACCGCTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: YSSQTLAGLQHLQRRKRCLVGTT*ILPLAA
Trigger: GGCAGCCAGCGGTAGAATCCATGTAGTTCCCACCAG...GCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAGCTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp GACTGCCTAGAAAGACAGGCAGCCAAGCAGCCTAGATCTATAAAAGAGGGGAGCAAGATGGGGTCTCCCTaGCTAGAGACCCCAGGCTCA +
Preference number: 2 (lower is better)
Translates to: DCLERQAAKQPRSIKEGSKMGSP*LETPGS
Trigger: TGAGCCTGGGGTCTCTAGCCAGGGAGACCCCATCTT...GCTCCCCTCTTTTATAGATCTAGGCTGCTTGGCTGCCTGTCTTTCTAGGCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR TCA 90 bp GGAGAAGGGAATGGGGACAGCTTCCTGGATGTCACCTCAGAAGGCAGAACCCCTACTTTTCCTCCTCCCTaGATAAATACGCACCTTCCC +
Preference number: 2 (lower is better)
Translates to: GEGNGDSFLDVTSEGRTPTFPPP*INTHLP
Trigger: GGGAAGGTGCGTATTTATTCAGGGAGGAGGAAAAGT...AGGGGTTCTGCCTTCTGAGGTGACATCCAGGAAGCTGTCCCCATTCCCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR GCA 90 bp TATAGCTCCCAGACCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCTACACAGCTAATCTCTaGAGAGGGCTCCGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: YSSQTLAGLQHLQRRKRCYTANL*RGLRVK
Trigger: CTTCACCCGGAGCCCTCTGCAGAGATTAGCTGTGTA...GCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAGCTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp GACTGCCTAGAAAGACAGGCAGCCAAGCAGCCTAGATCTATAAAAGAGGGGAGCGGCGCTTTTATGTCCTaGTTCCCAGGCGCTAAGGAC +
Preference number: 2 (lower is better)
Translates to: DCLERQAAKQPRSIKEGSGAFMS*FPGAKD
Trigger: GTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGCC...GCTCCCCTCTTTTATAGATCTAGGCTGCTTGGCTGCCTGTCTTTCTAGGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp TGGCAGGGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTCAGAAGCACTTTAAGTaGGATGAAAGGGACCCCGCC +
Preference number: 2 (lower is better)
Translates to: WQGQGKDKGQARETVGFIQKHFK*DERDPA
Trigger: GGCGGGGTCCCTTTCATCCCACTTAAAGTGCTTCTG...AATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTCAGAAGCACTTTAAGTaGGATGAAAGGGACCCCGCC +
Preference number: 2 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPQKHFK*DERDPA
Trigger: GGCGGGGTCCCTTTCATCCCACTTAAAGTGCTTCTG...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp TGGCAGGGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTGGGCTGAATCAGAGGTaGAGAGGGAAGGGGTTAGTT +
Preference number: 2 (lower is better)
Translates to: WQGQGKDKGQARETVGFIGLNQR*RGKGLV
Trigger: AACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCC...AATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp GACTGCCTAGAAAGACAGGCAGCCAAGCAGCCTAGATCTATAAAAGAGGGGAGCAGGAGGAAGAGATGCTaGGCCCAGATCCCAGGATCT +
Preference number: 2 (lower is better)
Translates to: DCLERQAAKQPRSIKEGSRRKRC*AQIPGS
Trigger: AGATCCTGGGATCTGGGCCCAGCATCTCTTCCTCCT...GCTCCCCTCTTTTATAGATCTAGGCTGCTTGGCTGCCTGTCTTTCTAGGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR GCA 90 bp CTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTCCCCAGTCAAATTCATCCTaGCTAGTAGCCCCAGAGACT +
Preference number: 2 (lower is better)
Translates to: LRRQNPFQWENNSFLSLPQSNSS*LVAPET
Trigger: AGTCTCTGGGGCTACTAGGCAGGATGAATTTGACTG...GGGAAGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR GCA 90 bp TTTATCATAGACCAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTGGCCCCACTTCTCTCTaGTCCGGGGACTGGGACTTG +
Preference number: 2 (lower is better)
Translates to: FIIDQELRAESEVEREGVGPTSL*SGDWDL
Trigger: CAAGTCCCAGTCCCCGGAGCAGAGAGAAGTGGGGCC...AACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTGGTCTATGATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp GAGGGGAGCAGAAGAAAACCTATCCAAAGCCTCTACCCGCATACCTCAGAGCTTGGGCTGAATCAGAGGTaGAGAGGGAAGGGGTTAGTT +
Preference number: 2 (lower is better)
Translates to: EGSRRKPIQSLYPHTSELGLNQR*RGKGLV
Trigger: AACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCC...AAGCTCTGAGGTATGCGGGTAGAGGCTTTGGATAGGTTTTCTTCTGCTCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CCA 90 bp GACTGCCTAGAAAGACAGGCAGCCAAGCAGCCTAGATCTATAAAAGAGGGGAGCGAGTTCCCCTTAGGATaGCCACTGGAAAAGGCTGTC +
Preference number: 2 (lower is better)
Translates to: DCLERQAAKQPRSIKEGSEFPLG*PLEKAV
Trigger: GACAGCCTTTTCCAGTGGCCATCCTAAGGGGAACTC...GCTCCCCTCTTTTATAGATCTAGGCTGCTTGGCTGCCTGTCTTTCTAGGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR TCA 90 bp CAGCTCCTACCGACCCAGTCAAATTCATCCTGCCTAGTAGCCCCAGAGACTAAGACTTTTCCTCCTCCCTaGATAAATACGCACCTTCCC +
Preference number: 2 (lower is better)
Translates to: QLLPTQSNSSCLVAPETKTFPPP*INTHLP
Trigger: GGGAAGGTGCGTATTTATTCAGGGAGGAGGAAAAGT...CTTAGTCTCTGGGGCTACTAGGCAGGATGAATTTGACTGGGTCGGTAGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR GCA 90 bp GAGGGGAGCAGAAGAAAACCTATCCAAAGCCTCTACCCGCATACCTCAGAGCTTGATTCTACCGCTGGCTaGCTTGAAAACACACCTAGG +
Preference number: 2 (lower is better)
Translates to: EGSRRKPIQSLYPHTSELDSTAG*LENTPR
Trigger: CCTAGGTGTGTTTTCAAGGCAGCCAGCGGTAGAATC...AAGCTCTGAGGTATGCGGGTAGAGGCTTTGGATAGGTTTTCTTCTGCTCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR TCA 90 bp GGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTTTCTTGCCAAGAATTAAGGGCTaGATCAGAGGTGGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: GQGKDKGQARETVGFIFLPRIKG*IRGGEG
Trigger: TCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTGG...CAAGAAAATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR GCA 90 bp GAGGGGAGCAGAAGAAAACCTATCCAAAGCCTCTACCCGCATACCTCAGAGCTTCAGTCAAATTCATCCTaGCTAGTAGCCCCAGAGACT +
Preference number: 2 (lower is better)
Translates to: EGSRRKPIQSLYPHTSELQSNSS*LVAPET
Trigger: AGTCTCTGGGGCTACTAGGCAGGATGAATTTGACTG...AAGCTCTGAGGTATGCGGGTAGAGGCTTTGGATAGGTTTTCTTCTGCTCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR CCA 72 bp CCGCCGCAGGGCGGCTCCGGAGGCGCTTTTATGTCCTaGTTCCCAGGCGCTAAGGACGTGTCCAGACAGCCA +
Preference number: 3 (lower is better)
Translates to: PPQGGSGGAFMS*FPGAKDVSRQP
Trigger: TGGCTGTCTGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGCCTCCGGAGCCGCCCTGCGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CAA 90 bp TGCCCCCAACCCTCTCAGCAAGGAAGGGGATCTCTGGTTGGGTTAGCAGGAGGTGAGAACAGAGGGGCATaGCGCAGCTCCTACCGACCC +
Preference number: 3 (lower is better)
Translates to: CPQPSQQGRGSLVGLAGGENRGA*RSSYRP
Trigger: GGGTCGGTAGGAGCTGCGCAATGCCCCTCTGTTCTC...ACCTCCTGCTAACCCAACCAGAGATCCCCTTCCTTGCTGAGAGGGTTGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR CCA 72 bp CCCCCTCCATCTATCTCGGTCCTTTATCGCCAGCCCTaGCTGGGAGGCTGTCAGGAATGGCAGCCCTCTTTC +
Preference number: 3 (lower is better)
Translates to: PPPSISVLYRQP*LGGCQEWQPSF
Trigger: GAAAGAGGGCTGCCATTCCTGACAGCCTCCCAGCCAGGGCTGGCGATAAAGGACCGAGATAGATGGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR GCA 72 bp AAGGCCCCTCTCTTGAGTGTGGGAAAGCCCTCCGGCTaGAAGGGCTGTGGCCTGTCAGACCCTTCCTCATAT +
Preference number: 3 (lower is better)
Translates to: KAPLLSVGKPSG*KGCGLSDPSSY
Trigger: ATATGAGGAAGGGTCTGACAGGCCACAGCCCTTGCAGCCGGAGGGCTTTCCCACACTCAAGAGAGGGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR CCA 72 bp TGGTGGCACAGGGAAGGGGTGGCTGGTTTCGATGGGTaGAGGAGAAAGGCATCTTACACCCACGGTGCCCTT +
Preference number: 3 (lower is better)
Translates to: WWHREGVAGFDG*RRKASYTHGAL
Trigger: AAGGGCACCGTGGGTGTAAGATGCCTTTCTCCTCCACCCATCGAAACCAGCCACCCCTTCCCTGTGCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR CCA 72 bp GTCTTGGTGGCACAGGGAAGGGGTGGCTGGTTTCGATaGGTGGAGGAGAAAGGCATCTTACACCCACGGTGC +
Preference number: 3 (lower is better)
Translates to: VLVAQGRGGWFR*VEEKGILHPRC
Trigger: GCACCGTGGGTGTAAGATGCCTTTCTCCTCCACCCATCGAAACCAGCCACCCCTTCCCTGTGCCACCAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR CCA 72 bp CCTCTACCCGCATACCTCAGAGCTTGGGGCTTCCATTaGGGGGAGCATCTGTGTCCACCAGCAACACCCATT +
Preference number: 3 (lower is better)
Translates to: PLPAYLRAWGFH*GEHLCPPATPI
Trigger: AATGGGTGTTGCTGGTGGACACAGATGCTCCCCCCAATGGAAGCCCCAAGCTCTGAGGTATGCGGGTAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CAA 90 bp TATAGCTCCCAGACCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCTCCGGGGACTGGGACTaGCTGTCTCCTCTAGCCTGT +
Preference number: 3 (lower is better)
Translates to: YSSQTLAGLQHLQRRKRCSGDWD*LSPLAC
Trigger: ACAGGCTAGAGGAGACAGCAAGTCCCAGTCCCCGGA...GCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAGCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CAA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTCCGGGGACTGGGACTaGCTGTCTCCTCTAGCCTGT +
Preference number: 3 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPSGDWD*LSPLAC
Trigger: ACAGGCTAGAGGAGACAGCAAGTCCCAGTCCCCGGA...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR CCA 72 bp CTTGAGTGTGGGAAAGCCCTCCGGCTGCAAGGGCTGTaGCCTGTCAGACCCTTCCTCATATCAGCTTCTTTC +
Preference number: 3 (lower is better)
Translates to: LECGKALRLQGL*PVRPFLISASF
Trigger: GAAAGAAGCTGATATGAGGAAGGGTCTGACAGGCCACAGCCCTTGCAGCCGGAGGGCTTTCCCACACTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CAA 90 bp ACCCCAGGCTCAGTAGAGAAACACACATACATGCACACAGGTACACACAACATGGAGAACAGAGGGGCATaGCGCAGCTCCTACCGACCC +
Preference number: 3 (lower is better)
Translates to: TPGSVEKHTYMHTGTHNMENRGA*RSSYRP
Trigger: GGGTCGGTAGGAGCTGCGCAATGCCCCTCTGTTCTC...CATGTTGTGTGTACCTGTGTGCATGTATGTGTGTTTCTCTACTGAGCCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR CCA 72 bp CCATCCCTGAGGGGAAGGCAACTGGTGGGAACTACATaGATTCTACCGCTGGCTGCCTTGAAAACACACCTA +
Preference number: 3 (lower is better)
Translates to: PSLRGRQLVGTT*ILPLAALKTHL
Trigger: TAGGTGTGTTTTCAAGGCAGCCAGCGGTAGAATCCATGTAGTTCCCACCAGTTGCCTTCCCCTCAGGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR CCA 72 bp AGGATCTTGGACATGGTGAATAAGATGGGGTCTCCCTaGCTAGAGACCCCAGGCTCAGTAGAGAAACACACA +
Preference number: 3 (lower is better)
Translates to: RILDMVNKMGSP*LETPGSVEKHT
Trigger: TGTGTGTTTCTCTACTGAGCCTGGGGTCTCTAGCCAGGGAGACCCCATCTTATTCACCATGTCCAAGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR GCA 72 bp GCAACTGGTGGGAACTACATGGATTCTACCGCTGGCTaGCTTGAAAACACACCTAGGGTAATAGATGGGGAA +
Preference number: 3 (lower is better)
Translates to: ATGGNYMDSTAG*LENTPRVIDGE
Trigger: TTCCCCATCTATTACCCTAGGTGTGTTTTCAAGGCAGCCAGCGGTAGAATCCATGTAGTTCCCACCAGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
3UTR-3UTR CAA 90 bp GAGGGGAGCAGAAGAAAACCTATCCAAAGCCTCTACCCGCATACCTCAGAGCTTGTGGGGTTTATTTTCTaGGTGACAGCTAAAGAGATG +
Preference number: 3 (lower is better)
Translates to: EGSRRKPIQSLYPHTSELVGFIF*VTAKEM
Trigger: CATCTCTTTAGCTGTCACCAAGAAAATAAACCCCAC...AAGCTCTGAGGTATGCGGGTAGAGGCTTTGGATAGGTTTTCTTCTGCTCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TTCCTCAAGCCACCCCCAAGGACGTCAGACCTGGGGGCTCGCATCCAGTGCCCCGAGGTCAGCGCGCCCTaGGTGTGGGGGAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: FLKPPPRTSDLGARIQCPEVSAP*VWGRSI
Trigger: GATGGACCTCCCCCACACTCAGGGCGCGCTGACCTC...GGGGCACTGGATGCGAGCCCCCAGGTCTGACGTCCTTGGGGGTGGCTTGAGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TTCCTCAAGCCACCCCCAAGGACGTCAGACCTGGGGGCTCGCATCCAGTGCCCCGCAGGGAGGCGGCACTaGGGAGCTCAGTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: FLKPPPRTSDLGARIQCPAGRRH*GAQLEG
Trigger: TCCCTCCAACTGAGCTCCTCAGTGCCGCCTCCCTGC...GGGGCACTGGATGCGAGCCCCCAGGTCTGACGTCCTTGGGGGTGGCTTGAGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GCGGCTCCGGAGGCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCATGCCGGGATCCGGGGTaGGGTGAGGGCAGGGACGGT +
Preference number: 4 (lower is better)
Translates to: AAPEALLCPGSQALRTCPCRDPG*GEGRDG
Trigger: ACCGTCCCTGCCCTCACCCCACCCCGGATCCCGGCA...TGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGCCTCCGGAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TTCCTCAAGCCACCCCCAAGGACGTCAGACCTGGGGGCTCGCATCCAGTGCCCCCTGGAATCCAGCCCTTaGGACTCCGGGGCGGCTACT +
Preference number: 4 (lower is better)
Translates to: FLKPPPRTSDLGARIQCPLESSP*DSGAAT
Trigger: AGTAGCCGCCCCGGAGTCTCAAGGGCTGGATTCCAG...GGGGCACTGGATGCGAGCCCCCAGGTCTGACGTCCTTGGGGGTGGCTTGAGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TTCCTCAAGCCACCCCCAAGGACGTCAGACCTGGGGGCTCGCATCCAGTGCCCCTGGCTGGTGCGCTACTaGCGGTCGCTCATAGGCCCT +
Preference number: 4 (lower is better)
Translates to: FLKPPPRTSDLGARIQCPWLVRY*RSLIGP
Trigger: AGGGCCTATGAGCGACCGTCAGTAGCGCACCAGCCA...GGGGCACTGGATGCGAGCCCCCAGGTCTGACGTCCTTGGGGGTGGCTTGAGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000536300.2
CDS-3UTR GCA 90 bp GCGGCTCCGGAGGCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCATGCGGCGCTTCCGTGTaGTGGCTGCCCAGAGAGCCG +
Preference number: 4 (lower is better)
Translates to: AAPEALLCPGSQALRTCPCGASV*WLPREP
Trigger: CGGCTCTCTGGGCAGCCAGCACACGGAAGCGCCGCA...TGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGCCTCCGGAGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TTCCTCAAGCCACCCCCAAGGACGTCAGACCTGGGGGCTCGCATCCAGTGCCCCGCAACCTGCAGGCACTaGCAAATCTCCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: FLKPPPRTSDLGARIQCPATCRH*QISSCP
Trigger: GGGGCAGGAGGAGATTTGGCAGTGCCTGCAGGTTGC...GGGGCACTGGATGCGAGCCCCCAGGTCTGACGTCCTTGGGGGTGGCTTGAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GCGGCTCCGGAGGCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCAGCAGCTGGAAGGAGGTaGTGCGCATGCGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: AAPEALLCPGSQALRTCPAAGRR*CACGWG
Trigger: ACCCCACCCGCATGCGCACCACCTCCTTCCAGCTGC...TGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGCCTCCGGAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp CAATACACAGCTAATCTCTGCAGAGGGCTCCGGGTGAAGAAAGGGAGCGAGGGGACCGCCGGGAGCCTTTaGGACGCGCCGCCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: QYTANLCRGLRVKKGSEGTAGSL*DAPPRP
Trigger: TGGACGGGGCGGCGCGTCCCAAAGGCTCCCGGCGGT...CCCCTCGCTCCCTTTCTTCACCCGGAGCCCTCTGCAGAGATTAGCTGTGTATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TTCCTCAAGCCACCCCCAAGGACGTCAGACCTGGGGGCTCGCATCCAGTGCCCCGGCCTCCACTCTGAGTaGGAACCAGTGGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: FLKPPPRTSDLGARIQCPGLHSE*EPVEVP
Trigger: AGGGACCTCCACTGGTTCCCACTCAGAGTGGAGGCC...GGGGCACTGGATGCGAGCCCCCAGGTCTGACGTCCTTGGGGGTGGCTTGAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp AGGCAGGGGAGAACAGAGGGGCATTGCGCAGCTCCTACCGACCCAGTCAAATTCTGCGGCGCTTCCGTGTaGTGGCTGCCCAGAGAGCCG +
Preference number: 4 (lower is better)
Translates to: RQGRTEGHCAAPTDPVKFCGASV*WLPREP
Trigger: CGGCTCTCTGGGCAGCCAGCACACGGAAGCGCCGCA...GAATTTGACTGGGTCGGTAGGAGCTGCGCAATGCCCCTCTGTTCTCCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp GCGGCTCCGGAGGCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCAGGTCCATCCAGCTGGTaGCCGGATGAAGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: AAPEALLCPGSQALRTCPGPSSW*PDEGPT
Trigger: GGTGGGACCTTCATCCGGGCACCAGCTGGATGGACC...TGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGCCTCCGGAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TGCCCCCAACCCTCTCAGCAAGGAAGGGGATCTCTGGTTGGGTTAGCAGGAGGTCCGCGAGGAGGCCCCTaGCAGCTCATAGCCCTGCGA +
Preference number: 4 (lower is better)
Translates to: CPQPSQQGRGSLVGLAGGPRGGP*QLIALR
Trigger: TCGCAGGGCTATGAGCTGCCAGGGGCCTCCTCGCGG...ACCTCCTGCTAACCCAACCAGAGATCCCCTTCCTTGCTGAGAGGGTTGGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GCGGCTCCGGAGGCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCAGGAGGTCCATCCAGCTaGTGCCCGGATGAAGGTCCC +
Preference number: 4 (lower is better)
Translates to: AAPEALLCPGSQALRTCPGGPSS*CPDEGP
Trigger: GGGACCTTCATCCGGGCACCAGCTGGATGGACCTCC...TGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGCCTCCGGAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCAGACAGCCACCACCGCATGCGGGTGGGGTaGCGGGGCACAAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ALLCPGSQALRTCPDSHHRMRVG*RGTKLV
Trigger: CACCAGCTTTGTGCCCCGCCACCCCACCCGCATGCG...GTGGTGGCTGTCTGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp GCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCAGACAGCCACCACTCCTCCGCGCCTGGGTaGGTCGGCCTGAACCACGAT +
Preference number: 4 (lower is better)
Translates to: ALLCPGSQALRTCPDSHHSSAPG*VGLNHD
Trigger: ATCGTGGTTCAGGCCGACTCACCCAGGCGCGGAGGA...GTGGTGGCTGTCTGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp CAGCTCCTACCGACCCAGTCAAATTCATCCTGCCTAGTAGCCCCAGAGACTAAGCCCCGGGTGGCCAGGTaGGGTCAGCGCGCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: QLLPTQSNSSCLVAPETKPRVAR*GQRALS
Trigger: ACTCAGGGCGCGCTGACCTCACCTGGCCACCCGGGG...CTTAGTCTCTGGGGCTACTAGGCAGGATGAATTTGACTGGGTCGGTAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TTCCTCAAGCCACCCCCAAGGACGTCAGACCTGGGGGCTCGCATCCAGTGCCCCTGTGACATGTCCGGCTaGAGGAGCTTGGAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: FLKPPPRTSDLGARIQCPCDMSG*RSLEKG
Trigger: CCCCTTTTCCAAGCTCCTGCAGCCGGACATGTCACA...GGGGCACTGGATGCGAGCCCCCAGGTCTGACGTCCTTGGGGGTGGCTTGAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp CCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCTGGGCCCAGATCCGGCACGGCTGGCTGGTaGGCTACTGACGGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: PWLGSSIYKGGRDAGPRSGTAGW*ATDGRS
Trigger: TGAGCGACCGTCAGTAGCGCACCAGCCAGCCGTGCC...GGATCTGGGCCCAGCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536300.2
CDS-3UTR CCA 90 bp AGGCAGGGGAGAACAGAGGGGCATTGCGCAGCTCCTACCGACCCAGTCAAATTCGCCATCCTCCGCGCCTaGGTGAGTCGGCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: RQGRTEGHCAAPTDPVKFAILRA*VSRPEP
Trigger: TGGTTCAGGCCGACTCACCCAGGCGCGGAGGATGGC...GAATTTGACTGGGTCGGTAGGAGCTGCGCAATGCCCCTCTGTTCTCCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TGCCCCCAACCCTCTCAGCAAGGAAGGGGATCTCTGGTTGGGTTAGCAGGAGGTGCAGCTGGAAGGAGGTaGTGCGCATGCGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: CPQPSQQGRGSLVGLAGGAAGRR*CACGWG
Trigger: ACCCCACCCGCATGCGCACCACCTCCTTCCAGCTGC...ACCTCCTGCTAACCCAACCAGAGATCCCCTTCCTTGCTGAGAGGGTTGGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TCTCCCTCCGGAAACCCTAGGGGCAGAAGCACTTTAAGTGGGATGAAAGGGACCCCCATCGGGCCCACATaGAGCCCCCAGTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SPSGNPRGRSTLSGMKGTPIGPT*SPQSLR
Trigger: GCGGAGCGACTGGGGGCTCCATGTGGGCCCGATGGG...GGTCCCTTTCATCCCACTTAAAGTGCTTCTGCCCCTAGGGTTTCCGGAGGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATACCCCACCAACCGGGCACGGCTGGCTaGTGCGCTACTGACGGTCGC +
Preference number: 4 (lower is better)
Translates to: GLNQRWRGKGLVPSIPHQPGTAG*CATDGR
Trigger: GCGACCGTCAGTAGCGCACCAGCCAGCCGTGCCCGG...TTGGTGGGGTATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536300.2
CDS-3UTR TCA 90 bp GGAGAAGGGAATGGGGACAGCTTCCTGGATGTCACCTCAGAAGGCAGAACCCCTTCCTCCGCGCCTGGGTaGGTCGGCCTGAACCACGAT +
Preference number: 4 (lower is better)
Translates to: GEGNGDSFLDVTSEGRTPSSAPG*VGLNHD
Trigger: ATCGTGGTTCAGGCCGACTCACCCAGGCGCGGAGGA...AGGGGTTCTGCCTTCTGAGGTGACATCCAGGAAGCTGTCCCCATTCCCTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp GAGGGGAGCAGAAGAAAACCTATCCAAAGCCTCTACCCGCATACCTCAGAGCTTCCCCGGGTGGCCAGGTaGGGTCAGCGCGCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: EGSRRKPIQSLYPHTSELPRVAR*GQRALS
Trigger: ACTCAGGGCGCGCTGACCTCACCTGGCCACCCGGGG...AAGCTCTGAGGTATGCGGGTAGAGGCTTTGGATAGGTTTTCTTCTGCTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp CAGCTCCTACCGACCCAGTCAAATTCATCCTGCCTAGTAGCCCCAGAGACTAAGACAGACGGTCTGGCCTaGGCTGCGGGGCACCGACCG +
Preference number: 4 (lower is better)
Translates to: QLLPTQSNSSCLVAPETKTDGLA*AAGHRP
Trigger: CGGTCGGTGCCCCGCAGCTCAGGCCAGACCGTCTGT...CTTAGTCTCTGGGGCTACTAGGCAGGATGAATTTGACTGGGTCGGTAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp CCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCTGGGCCCAGATCCAGGAGGGAGCAGGGATaGTGCCAAGTCCTCACGGCC +
Preference number: 4 (lower is better)
Translates to: PWLGSSIYKGGRDAGPRSRREQG*CQVLTA
Trigger: GGCCGTGAGGACTTGGCAGCATCCCTGCTCCCTCCT...GGATCTGGGCCCAGCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342234.3
CDS-3UTR GCA 90 bp CTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTCCCGGCGGCCCTAGGAGATaGTGCCCTCCGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LRRQNPFQWENNSFLSLPGGPRR*CPPAAG
Trigger: TCCAGCTGCCGGAGGGCAGCATCTCCTAGGGCCGCC...GGGAAGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTGGGGCTCGCATCCAGTaGCCCCCGGGATACCCGCAG +
Preference number: 4 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPGARIQ*PPGYPQ
Trigger: CTGCGGGTATCCCGGGGGGCACTGGATGCGAGCCCC...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TGCCCCCAACCCTCTCAGCAAGGAAGGGGATCTCTGGTTGGGTTAGCAGGAGGTGGCCCCACTTCTCTCTaGTCCGGGGACTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: CPQPSQQGRGSLVGLAGGGPTSL*SGDWDL
Trigger: CAAGTCCCAGTCCCCGGAGCAGAGAGAAGTGGGGCC...ACCTCCTGCTAACCCAACCAGAGATCCCCTTCCTTGCTGAGAGGGTTGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TTCCTCAAGCCACCCCCAAGGACGTCAGACCTGGGGGCTCGCATCCAGTGCCCCATGGGGACAGCTTCCTaGATGTCACCTCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: FLKPPPRTSDLGARIQCPMGTAS*MSPQKA
Trigger: TGCCTTCTGAGGTGACATCCAGGAAGCTGTCCCCAT...GGGGCACTGGATGCGAGCCCCCAGGTCTGACGTCCTTGGGGGTGGCTTGAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TATAGCTCCCAGACCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCGAGGTCAGCGCGCCCTaGGTGTGGGGGAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: YSSQTLAGLQHLQRRKRCEVSAP*VWGRSI
Trigger: GATGGACCTCCCCCACACTCAGGGCGCGCTGACCTC...GCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAGCTATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp GACTGCCTAGAAAGACAGGCAGCCAAGCAGCCTAGATCTATAAAAGAGGGGAGCACAGACGGTCTGGCCTaGGCTGCGGGGCACCGACCG +
Preference number: 4 (lower is better)
Translates to: DCLERQAAKQPRSIKEGSTDGLA*AAGHRP
Trigger: CGGTCGGTGCCCCGCAGCTCAGGCCAGACCGTCTGT...GCTCCCCTCTTTTATAGATCTAGGCTGCTTGGCTGCCTGTCTTTCTAGGCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TGCCCCCAACCCTCTCAGCAAGGAAGGGGATCTCTGGTTGGGTTAGCAGGAGGTTGCAGGCCTCCACTCTaGGTGGGAACCAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: CPQPSQQGRGSLVGLAGGCRPPL*VGTSGG
Trigger: ACCTCCACTGGTTCCCACTCAGAGTGGAGGCCTGCA...ACCTCCTGCTAACCCAACCAGAGATCCCCTTCCTTGCTGAGAGGGTTGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp AGGCAGGGGAGAACAGAGGGGCATTGCGCAGCTCCTACCGACCCAGTCAAATTCCTCTCCCTTCCCCTGTaGGATGAGGGGGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RQGRTEGHCAAPTDPVKFLSLPL*DEGEEG
Trigger: TCCTTCCTCCCCCTCATCTCACAGGGGAAGGGAGAG...GAATTTGACTGGGTCGGTAGGAGCTGCGCAATGCCCCTCTGTTCTCCCCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TGCCCCCAACCCTCTCAGCAAGGAAGGGGATCTCTGGTTGGGTTAGCAGGAGGTAGGGAGCAGGGATGCTaGCAAGTCCTCACGGCCTCA +
Preference number: 4 (lower is better)
Translates to: CPQPSQQGRGSLVGLAGGREQGC*QVLTAS
Trigger: TGAGGCCGTGAGGACTTGGCAGCATCCCTGCTCCCT...ACCTCCTGCTAACCCAACCAGAGATCCCCTTCCTTGCTGAGAGGGTTGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342234.3
CDS-3UTR GCA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTGGAGGGAGCCACGCTaGCCTCGGCCTCGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPWREPR*PRPRVC
Trigger: GCAAACGCGAGGCCGAGGGCAGCGTGGCTCCCTCCA...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp AGGCAGGGGAGAACAGAGGGGCATTGCGCAGCTCCTACCGACCCAGTCAAATTCGCAACCTGCAGGCACTaGCAAATCTCCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RQGRTEGHCAAPTDPVKFATCRH*QISSCP
Trigger: GGGGCAGGAGGAGATTTGGCAGTGCCTGCAGGTTGC...GAATTTGACTGGGTCGGTAGGAGCTGCGCAATGCCCCTCTGTTCTCCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp AATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATACCCCACCAAATCCCTTGCCGGGATCCGGGGTaGGGTGAGGGCAGGGACGGT +
Preference number: 4 (lower is better)
Translates to: NQRWRGKGLVPSIPHQIPCRDPG*GEGRDG
Trigger: ACCGTCCCTGCCCTCACCCCACCCCGGATCCCGGCA...AGGGATTTGGTGGGGTATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TATAGCTCCCAGACCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCCCGCGAGGAGGCCCCTaGCAGCTCATAGCCCTGCGA +
Preference number: 4 (lower is better)
Translates to: YSSQTLAGLQHLQRRKRCPRGGP*QLIALR
Trigger: TCGCAGGGCTATGAGCTGCCAGGGGCCTCCTCGCGG...GCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAGCTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TATAGCTCCCAGACCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCTGGTGCGCATGCGGGTaGGGTGGCGGGGCACAAAGC +
Preference number: 4 (lower is better)
Translates to: YSSQTLAGLQHLQRRKRCWCACG*GGGAQS
Trigger: GCTTTGTGCCCCGCCACCCCACCCGCATGCGCACCA...GCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAGCTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GCGGCTCCGGAGGCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCACTGGTGGGAACTACATaGATTCTACCGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AAPEALLCPGSQALRTCPLVGTT*ILPLAA
Trigger: GGCAGCCAGCGGTAGAATCCATGTAGTTCCCACCAG...TGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGCCTCCGGAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GCGGCTCCGGAGGCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCACTCCCAGACCTTGGCTaGGCTCCAGCATCTACAAAG +
Preference number: 4 (lower is better)
Translates to: AAPEALLCPGSQALRTCPLPDLG*APASTK
Trigger: CTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAG...TGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGCCTCCGGAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTGGTGGTCGCTGCGCATaGAGACGCGGCTGCAGACTG +
Preference number: 4 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPGGRCA*RRGCRL
Trigger: CAGTCTGCAGCCGCGTCTTCATGCGCAGCGACCACC...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TGGCAGGGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTGCAGGGAGGCGGCACTaGGGAGCTCAGTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: WQGQGKDKGQARETVGFIAGRRH*GAQLEG
Trigger: TCCCTCCAACTGAGCTCCTCAGTGCCGCCTCCCTGC...AATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCCCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp GACTGCCTAGAAAGACAGGCAGCCAAGCAGCCTAGATCTATAAAAGAGGGGAGCGGCGGCCCTAGGAGATaGTGCCCTCCGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: DCLERQAAKQPRSIKEGSGGPRR*CPPAAG
Trigger: TCCAGCTGCCGGAGGGCAGCATCTCCTAGGGCCGCC...GCTCCCCTCTTTTATAGATCTAGGCTGCTTGGCTGCCTGTCTTTCTAGGCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp AGGCAGGGGAGAACAGAGGGGCATTGCGCAGCTCCTACCGACCCAGTCAAATTCAGAACAGAGGGGCATTaGGCAGCTCCTACCGACCCA +
Preference number: 4 (lower is better)
Translates to: RQGRTEGHCAAPTDPVKFRTEGH*AAPTDP
Trigger: TGGGTCGGTAGGAGCTGCGCAATGCCCCTCTGTTCT...GAATTTGACTGGGTCGGTAGGAGCTGCGCAATGCCCCTCTGTTCTCCCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TGGCAGGGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTGCCATCCTCCGCGCCTaGGTGAGTCGGCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: WQGQGKDKGQARETVGFIAILRA*VSRPEP
Trigger: TGGTTCAGGCCGACTCACCCAGGCGCGGAGGATGGC...AATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCCCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GAGGGGAGCAGAAGAAAACCTATCCAAAGCCTCTACCCGCATACCTCAGAGCTTTGGTGCGCATGCGGGTaGGGTGGCGGGGCACAAAGC +
Preference number: 4 (lower is better)
Translates to: EGSRRKPIQSLYPHTSELWCACG*GGGAQS
Trigger: GCTTTGTGCCCCGCCACCCCACCCGCATGCGCACCA...AAGCTCTGAGGTATGCGGGTAGAGGCTTTGGATAGGTTTTCTTCTGCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATACCCCACCAACCGCCTCCAGACAGTTaGGGCAGCGACAGACGGTCT +
Preference number: 4 (lower is better)
Translates to: GLNQRWRGKGLVPSIPHQPPPDS*GSDRRS
Trigger: AGACCGTCTGTCGCTGCCCCAACTGTCTGGAGGCGG...TTGGTGGGGTATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp AGGCAGGGGAGAACAGAGGGGCATTGCGCAGCTCCTACCGACCCAGTCAAATTCCACAGGGGAACTTCTTaGTGCCGGTGTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RQGRTEGHCAAPTDPVKFHRGTS*CRCGSG
Trigger: TCCAGACCCACACCGGCACCAAGAAGTTCCCCTGTG...GAATTTGACTGGGTCGGTAGGAGCTGCGCAATGCCCCTCTGTTCTCCCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TCTCCCTCCGGAAACCCTAGGGGCAGAAGCACTTTAAGTGGGATGAAAGGGACCATCGCCAGCCCTGGCTaGGAGGCTGTCAGGAATGGC +
Preference number: 4 (lower is better)
Translates to: SPSGNPRGRSTLSGMKGTIASPG*EAVRNG
Trigger: GCCATTCCTGACAGCCTCCCAGCCAGGGCTGGCGAT...GGTCCCTTTCATCCCACTTAAAGTGCTTCTGCCCCTAGGGTTTCCGGAGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATACCCCACCAAATCGCCAGCCCTGGCTaGGAGGCTGTCAGGAATGGC +
Preference number: 4 (lower is better)
Translates to: GLNQRWRGKGLVPSIPHQIASPG*EAVRNG
Trigger: GCCATTCCTGACAGCCTCCCAGCCAGGGCTGGCGAT...TTGGTGGGGTATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GCGGCTCCGGAGGCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCAGGGCTGAATCAGAGGTaGAGAGGGAAGGGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: AAPEALLCPGSQALRTCPGLNQR*RGKGLV
Trigger: AACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCC...TGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGCCTCCGGAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TGCCCCCAACCCTCTCAGCAAGGAAGGGGATCTCTGGTTGGGTTAGCAGGAGGTAAGATGGGGTCTCCCTaGCTAGAGACCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: CPQPSQQGRGSLVGLAGGKMGSP*LETPGS
Trigger: TGAGCCTGGGGTCTCTAGCCAGGGAGACCCCATCTT...ACCTCCTGCTAACCCAACCAGAGATCCCCTTCCTTGCTGAGAGGGTTGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp GGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTTTCTTGAGCTGGCGGCGGCAGTaGGGGCCAAGTGGCGGTGAT +
Preference number: 4 (lower is better)
Translates to: GQGKDKGQARETVGFIFLSWRRQ*GPSGGD
Trigger: ATCACCGCCACTTGGCCCTCACTGCCGCCGCCAGCT...CAAGAAAATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000342234.3
CDS-3UTR TCA 90 bp CTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTCCCCTCTCCCTTCCCCTGTaGGATGAGGGGGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LRRQNPFQWENNSFLSLPLSLPL*DEGEEG
Trigger: TCCTTCCTCCCCCTCATCTCACAGGGGAAGGGAGAG...GGGAAGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp GAGGGGAGCAGAAGAAAACCTATCCAAAGCCTCTACCCGCATACCTCAGAGCTTGGCCCTAGGAGATGCTaGCCTCCGGCAGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: EGSRRKPIQSLYPHTSELGPRRC*PPAAGR
Trigger: CCTTCCAGCTGCCGGAGGGCAGCATCTCCTAGGGCC...AAGCTCTGAGGTATGCGGGTAGAGGCTTTGGATAGGTTTTCTTCTGCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp GGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTTTCTTGTGGAGGGAGCCACGCTaGCCTCGGCCTCGCGTTTGC +
Preference number: 4 (lower is better)
Translates to: GQGKDKGQARETVGFIFLWREPR*PRPRVC
Trigger: GCAAACGCGAGGCCGAGGGCAGCGTGGCTCCCTCCA...CAAGAAAATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp ATTTTAGAAGAGGACTTCCCTACTCGCCCCCTCCATCTATCTCGGTCCTTTATCGGGGCTCGCATCCAGTaGCCCCCGGGATACCCGCAG +
Preference number: 4 (lower is better)
Translates to: ILEEDFPTRPLHLSRSFIGARIQ*PPGYPQ
Trigger: CTGCGGGTATCCCGGGGGGCACTGGATGCGAGCCCC...GATAAAGGACCGAGATAGATGGAGGGGGCGAGTAGGGAAGTCCTCTTCTAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp CAGCTCCTACCGACCCAGTCAAATTCATCCTGCCTAGTAGCCCCAGAGACTAAGGGCCCCACTTCTCTCTaGTCCGGGGACTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: QLLPTQSNSSCLVAPETKGPTSL*SGDWDL
Trigger: CAAGTCCCAGTCCCCGGAGCAGAGAGAAGTGGGGCC...CTTAGTCTCTGGGGCTACTAGGCAGGATGAATTTGACTGGGTCGGTAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TGGCAGGGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTGGAAAGCCCTCCGGCTaGAAGGGCTGTGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: WQGQGKDKGQARETVGFIGKPSG*KGCGLS
Trigger: TGACAGGCCACAGCCCTTGCAGCCGGAGGGCTTTCC...AATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCCCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTGGAGGTCCATCCAGCTaGTGCCCGGATGAAGGTCCC +
Preference number: 4 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPGGPSS*CPDEGP
Trigger: GGGACCTTCATCCGGGCACCAGCTGGATGGACCTCC...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TTCCTTCATGGCTCCAACAGACTGGGTCTGAAAGGGTTAATAAGGAAGCTCATCACCGCCGGGAGCCTTTaGGACGCGCCGCCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: FLHGSNRLGLKGLIRKLITAGSL*DAPPRP
Trigger: TGGACGGGGCGGCGCGTCCCAAAGGCTCCCGGCGGT...GATGAGCTTCCTTATTAACCCTTTCAGACCCAGTCTGTTGGAGCCATGAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTCCGCCTCCAGACAGTTaGGGCAGCGACAGACGGTCT +
Preference number: 4 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPPPPDS*GSDRRS
Trigger: AGACCGTCTGTCGCTGCCCCAACTGTCTGGAGGCGG...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TATAGCTCCCAGACCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCCAGCCGCCTCCTCCTTaGCGCCCTCGTGGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: YSSQTLAGLQHLQRRKRCQPPPP*RPRGFS
Trigger: TGAAAACCCACGAGGGCGCCAAGGAGGAGGCGGCTG...GCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAGCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TGCCCCCAACCCTCTCAGCAAGGAAGGGGATCTCTGGTTGGGTTAGCAGGAGGTGGCGCTTTTATGTCCTaGTTCCCAGGCGCTAAGGAC +
Preference number: 4 (lower is better)
Translates to: CPQPSQQGRGSLVGLAGGGAFMS*FPGAKD
Trigger: GTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGCC...ACCTCCTGCTAACCCAACCAGAGATCCCCTTCCTTGCTGAGAGGGTTGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp CAATACACAGCTAATCTCTGCAGAGGGCTCCGGGTGAAGAAAGGGAGCGAGGGGAAGATGGGGTCTCCCTaGCTAGAGACCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: QYTANLCRGLRVKKGSEGKMGSP*LETPGS
Trigger: TGAGCCTGGGGTCTCTAGCCAGGGAGACCCCATCTT...CCCCTCGCTCCCTTTCTTCACCCGGAGCCCTCTGCAGAGATTAGCTGTGTATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATACCCCACCAAGGCACAGGGAAGGGGTaGCTGGTTTCGATGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GLNQRWRGKGLVPSIPHQGTGKG*LVSMGG
Trigger: TCCACCCATCGAAACCAGCCACCCCTTCCCTGTGCC...TTGGTGGGGTATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TGCCCCCAACCCTCTCAGCAAGGAAGGGGATCTCTGGTTGGGTTAGCAGGAGGTCTGGGTGAGTCGGCCTaGACCACGATTCATAATGGT +
Preference number: 4 (lower is better)
Translates to: CPQPSQQGRGSLVGLAGGLGESA*TTIHNG
Trigger: ACCATTATGAATCGTGGTTCAGGCCGACTCACCCAG...ACCTCCTGCTAACCCAACCAGAGATCCCCTTCCTTGCTGAGAGGGTTGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp GGAGAAGGGAATGGGGACAGCTTCCTGGATGTCACCTCAGAAGGCAGAACCCCTACTACCCCAGGCCAATaGGTTCCTCGGGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GEGNGDSFLDVTSEGRTPTTPGQ*VPREGH
Trigger: ATGACCTTCCCGAGGAACTCATTGGCCTGGGGTAGT...AGGGGTTCTGCCTTCTGAGGTGACATCCAGGAAGCTGTCCCCATTCCCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp ATTTTAGAAGAGGACTTCCCTACTCGCCCCCTCCATCTATCTCGGTCCTTTATCCCCAGCGGGAGGCTCTaGAGCTCTCCAGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ILEEDFPTRPLHLSRSFIPSGRL*SSPGCS
Trigger: GCTGCAGCCTGGAGAGCTGCAGAGCCTCCCGCTGGG...GATAAAGGACCGAGATAGATGGAGGGGGCGAGTAGGGAAGTCCTCTTCTAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp GAGGGGAGCAGAAGAAAACCTATCCAAAGCCTCTACCCGCATACCTCAGAGCTTGGTCCATCCAGCTGGTaGCCGGATGAAGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: EGSRRKPIQSLYPHTSELGPSSW*PDEGPT
Trigger: GGTGGGACCTTCATCCGGGCACCAGCTGGATGGACC...AAGCTCTGAGGTATGCGGGTAGAGGCTTTGGATAGGTTTTCTTCTGCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp CAATACACAGCTAATCTCTGCAGAGGGCTCCGGGTGAAGAAAGGGAGCGAGGGGTCGTGGGTTTTCATGTaGTTGGCCAGGTGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: QYTANLCRGLRVKKGSEGSWVFM*LARWSL
Trigger: CAGCGACCACCTGGCCAAGCACATGAAAACCCACGA...CCCCTCGCTCCCTTTCTTCACCCGGAGCCCTCTGCAGAGATTAGCTGTGTATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp GCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCAGACAGCCACCACTACACAGCTAATCTCTaGAGAGGGCTCCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ALLCPGSQALRTCPDSHHYTANL*RGLRVK
Trigger: CTTCACCCGGAGCCCTCTGCAGAGATTAGCTGTGTA...GTGGTGGCTGTCTGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp ATTTTAGAAGAGGACTTCCCTACTCGCCCCCTCCATCTATCTCGGTCCTTTATCGACGGGACCAGTCCATaGAGCCCAGAGCTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: ILEEDFPTRPLHLSRSFIDGTSP*SPELAA
Trigger: CGCCGCCAGCTCTGGGCTCCATGGACTGGTCCCGTC...GATAAAGGACCGAGATAGATGGAGGGGGCGAGTAGGGAAGTCCTCTTCTAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342234.3
CDS-3UTR CCA 90 bp CAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATGGCGCTTCCGTGTGCTaGCTGCCCAGAGAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: QELRAESEVEREGVSSFHGASVC*LPREPQ
Trigger: CTGCGGCTCTCTGGGCAGCCAGCACACGGAAGCGCC...ATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TTCCTTCATGGCTCCAACAGACTGGGTCTGAAAGGGTTAATAAGGAAGCTCATCCCCATCGGGCCCACATaGAGCCCCCAGTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: FLHGSNRLGLKGLIRKLIPIGPT*SPQSLR
Trigger: GCGGAGCGACTGGGGGCTCCATGTGGGCCCGATGGG...GATGAGCTTCCTTATTAACCCTTTCAGACCCAGTCTGTTGGAGCCATGAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GACTGCCTAGAAAGACAGGCAGCCAAGCAGCCTAGATCTATAAAAGAGGGGAGCTTCTTGGTGCCGGTGTaGGTCTGGAGGTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: DCLERQAAKQPRSIKEGSFLVPV*VWRWRC
Trigger: GCAGCGCCACCTCCAGACCCACACCGGCACCAAGAA...GCTCCCCTCTTTTATAGATCTAGGCTGCTTGGCTGCCTGTCTTTCTAGGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TCTCCCTCCGGAAACCCTAGGGGCAGAAGCACTTTAAGTGGGATGAAAGGGACCTCCTTGGCGCCCTCGTaGGTTTTCATGTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SPSGNPRGRSTLSGMKGTSLAPS*VFMCLA
Trigger: GGCCAAGCACATGAAAACCCACGAGGGCGCCAAGGA...GGTCCCTTTCATCCCACTTAAAGTGCTTCTGCCCCTAGGGTTTCCGGAGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp CTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTCCCCTCTGCTCCGGGGACTaGGACTTGCTGTCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LRRQNPFQWENNSFLSLPLCSGD*DLLSPL
Trigger: TAGAGGAGACAGCAAGTCCCAGTCCCCGGAGCAGAG...GGGAAGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp CTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTCCCCTTTATCGCCAGCCCTaGCTGGGAGGCTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LRRQNPFQWENNSFLSLPLYRQP*LGGCQE
Trigger: TTCCTGACAGCCTCCCAGCCAGGGCTGGCGATAAAG...GGGAAGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GGAGAAGGGAATGGGGACAGCTTCCTGGATGTCACCTCAGAAGGCAGAACCCCTAGGAGGAAGAGATGCTaGGCCCAGATCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GEGNGDSFLDVTSEGRTPRRKRC*AQIPGS
Trigger: AGATCCTGGGATCTGGGCCCAGCATCTCTTCCTCCT...AGGGGTTCTGCCTTCTGAGGTGACATCCAGGAAGCTGTCCCCATTCCCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TGGCAGGGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTGGCACAGGGAAGGGGTaGCTGGTTTCGATGGGTGGA +
Preference number: 4 (lower is better)
Translates to: WQGQGKDKGQARETVGFIGTGKG*LVSMGG
Trigger: TCCACCCATCGAAACCAGCCACCCCTTCCCTGTGCC...AATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCAGACAGCCACCACCCAGCAACACCCATTTaGGAGTTCCCCTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: ALLCPGSQALRTCPDSHHPATPI*EFPLGW
Trigger: CCATCCTAAGGGGAACTCCCAAATGGGTGTTGCTGG...GTGGTGGCTGTCTGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp CTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTCCCGCTTGGGGCTTCCATTaGGGGGAGCATCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LRRQNPFQWENNSFLSLPAWGFH*GEHLCP
Trigger: TGGACACAGATGCTCCCCCCAATGGAAGCCCCAAGC...GGGAAGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp ACCCCAGGCTCAGTAGAGAAACACACATACATGCACACAGGTACACACAACATGGGTGGTCGCTGCGCATaGAGACGCGGCTGCAGACTG +
Preference number: 4 (lower is better)
Translates to: TPGSVEKHTYMHTGTHNMGGRCA*RRGCRL
Trigger: CAGTCTGCAGCCGCGTCTTCATGCGCAGCGACCACC...CATGTTGTGTGTACCTGTGTGCATGTATGTGTGTTTCTCTACTGAGCCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TGCCCCCAACCCTCTCAGCAAGGAAGGGGATCTCTGGTTGGGTTAGCAGGAGGTCCAAGAATTAAGGGCTaGATCAGAGGTGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: CPQPSQQGRGSLVGLAGGPRIKG*IRGGEG
Trigger: TCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTGG...ACCTCCTGCTAACCCAACCAGAGATCCCCTTCCTTGCTGAGAGGGTTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp CTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTCCCGCAAATGCTTCTTCTTaGCCCCATCGGGCCCACATG +
Preference number: 4 (lower is better)
Translates to: LRRQNPFQWENNSFLSLPANASS*PHRAHM
Trigger: CATGTGGGCCCGATGGGGGCAAGAAGAAGCATTTGC...GGGAAGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TGCCCCCAACCCTCTCAGCAAGGAAGGGGATCTCTGGTTGGGTTAGCAGGAGGTGGGATGTGGCAGTTGTaGAAATGCTTCTTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: CPQPSQQGRGSLVGLAGGGMWQL*KCFFLP
Trigger: GGGCAAGAAGAAGCATTTGCACAACTGCCACATCCC...ACCTCCTGCTAACCCAACCAGAGATCCCCTTCCTTGCTGAGAGGGTTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TGGCAGGGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTGACGCGGCTGCAGACTaGACAGGGGAACTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: WQGQGKDKGQARETVGFIDAAAD*TGELLG
Trigger: ACCAAGAAGTTCCCCTGTGCAGTCTGCAGCCGCGTC...AATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp CTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTCCCTCGTGGGTTTTCATGTaGTTGGCCAGGTGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: LRRQNPFQWENNSFLSLPSWVFM*LARWSL
Trigger: CAGCGACCACCTGGCCAAGCACATGAAAACCCACGA...GGGAAGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TCTCCCTCCGGAAACCCTAGGGGCAGAAGCACTTTAAGTGGGATGAAAGGGACCGAGACACCCCCAATCTaGCCTCAACCAGCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SPSGNPRGRSTLSGMKGTETPPI*PQPAQE
Trigger: TTCTTGGGCTGGTTGAGGGCAGATTGGGGGTGTCTC...GGTCCCTTTCATCCCACTTAAAGTGCTTCTGCCCCTAGGGTTTCCGGAGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp GAGGGGAGCAGAAGAAAACCTATCCAAAGCCTCTACCCGCATACCTCAGAGCTTCCTGGCCAGGCAACCTaGAGGCACTGCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: EGSRRKPIQSLYPHTSELPGQAT*RHCQIS
Trigger: GGAGATTTGGCAGTGCCTGCAGGTTGCCTGGCCAGG...AAGCTCTGAGGTATGCGGGTAGAGGCTTTGGATAGGTTTTCTTCTGCTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp CTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTCCCATCTTACACCCACGGTaGCCTTCCTCTTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: LRRQNPFQWENNSFLSLPILHPR*PSSFPL
Trigger: GAGGGGGAAAGAGGAAGGGCACCGTGGGTGTAAGAT...GGGAAGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TCTCCCTCCGGAAACCCTAGGGGCAGAAGCACTTTAAGTGGGATGAAAGGGACCATCTTACACCCACGGTaGCCTTCCTCTTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: SPSGNPRGRSTLSGMKGTILHPR*PSSFPL
Trigger: GAGGGGGAAAGAGGAAGGGCACCGTGGGTGTAAGAT...GGTCCCTTTCATCCCACTTAAAGTGCTTCTGCCCCTAGGGTTTCCGGAGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GACTGCCTAGAAAGACAGGCAGCCAAGCAGCCTAGATCTATAAAAGAGGGGAGCCAGGGAAGGGGTGGCTaGTTTCGATGGGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: DCLERQAAKQPRSIKEGSQGRGG*FRWVEE
Trigger: CTCCTCCACCCATCGAAACCAGCCACCCCTTCCCTG...GCTCCCCTCTTTTATAGATCTAGGCTGCTTGGCTGCCTGTCTTTCTAGGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp CAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATCTGGAATCCAGCCCTTaGGACTCCGGGGCGGCTACT +
Preference number: 4 (lower is better)
Translates to: QELRAESEVEREGVSSFHLESSP*DSGAAT
Trigger: AGTAGCCGCCCCGGAGTCTCAAGGGCTGGATTCCAG...ATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp CAATACACAGCTAATCTCTGCAGAGGGCTCCGGGTGAAGAAAGGGAGCGAGGGGGGATCTTGGACATGGTaGATAAGATGGGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: QYTANLCRGLRVKKGSEGGSWTW*IRWGLP
Trigger: AGGGAGACCCCATCTTATTCACCATGTCCAAGATCC...CCCCTCGCTCCCTTTCTTCACCCGGAGCCCTCTGCAGAGATTAGCTGTGTATTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTACTACCCCAGGCCAATaGGTTCCTCGGGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPTTPGQ*VPREGH
Trigger: ATGACCTTCCCGAGGAACTCATTGGCCTGGGGTAGT...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTGTGACATGTCCGGCTaGAGGAGCTTGGAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPCDMSG*RSLEKG
Trigger: CCCCTTTTCCAAGCTCCTGCAGCCGGACATGTCACA...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TTCCTTCATGGCTCCAACAGACTGGGTCTGAAAGGGTTAATAAGGAAGCTCATCGGCCCTAGGAGATGCTaGCCTCCGGCAGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: FLHGSNRLGLKGLIRKLIGPRRC*PPAAGR
Trigger: CCTTCCAGCTGCCGGAGGGCAGCATCTCCTAGGGCC...GATGAGCTTCCTTATTAACCCTTTCAGACCCAGTCTGTTGGAGCCATGAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp AATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATACCCCACCAAATCCCTAGGGGAACTTCTTGGTaGCGGTGTGGGTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: NQRWRGKGLVPSIPHQIPRGTSW*RCGSGG
Trigger: ACCTCCAGACCCACACCGGCACCAAGAAGTTCCCCT...AGGGATTTGGTGGGGTATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp GAGGGGAGCAGAAGAAAACCTATCCAAAGCCTCTACCCGCATACCTCAGAGCTTAGGGGAACTTCTTGGTaGCGGTGTGGGTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: EGSRRKPIQSLYPHTSELRGTSW*RCGSGG
Trigger: ACCTCCAGACCCACACCGGCACCAAGAAGTTCCCCT...AAGCTCTGAGGTATGCGGGTAGAGGCTTTGGATAGGTTTTCTTCTGCTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TGGCAGGGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTGAGACACCCCCAATCTaGCCTCAACCAGCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: WQGQGKDKGQARETVGFIETPPI*PQPAQE
Trigger: TTCTTGGGCTGGTTGAGGGCAGATTGGGGGTGTCTC...AATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCCCTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp CAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATGGAAAGCCCTCCGGCTaGAAGGGCTGTGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: QELRAESEVEREGVSSFHGKPSG*KGCGLS
Trigger: TGACAGGCCACAGCCCTTGCAGCCGGAGGGCTTTCC...ATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp GGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTTTCTTGCCTGGCCAGGCAACCTaGAGGCACTGCCAAATCTCC +
Preference number: 4 (lower is better)
Translates to: GQGKDKGQARETVGFIFLPGQAT*RHCQIS
Trigger: GGAGATTTGGCAGTGCCTGCAGGTTGCCTGGCCAGG...CAAGAAAATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TTTATCATAGACCAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTGGCGCTTCCGTGTGCTaGCTGCCCAGAGAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: FIIDQELRAESEVEREGVGASVC*LPREPQ
Trigger: CTGCGGCTCTCTGGGCAGCCAGCACACGGAAGCGCC...AACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTGGTCTATGATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp CAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATCCGCCCCGTCCAGGCTaGAATCCAGCCCTTGAGACT +
Preference number: 4 (lower is better)
Translates to: QELRAESEVEREGVSSFHPPRPG*NPALET
Trigger: AGTCTCAAGGGCTGGATTCCAGCCTGGACGGGGCGG...ATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp ACCCCAGGCTCAGTAGAGAAACACACATACATGCACACAGGTACACACAACATGCAAGGACGTCAGACCTaGGGGCTCGCATCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TPGSVEKHTYMHTGTHNMQGRQT*GLASSA
Trigger: GGCACTGGATGCGAGCCCCCAGGTCTGACGTCCTTG...CATGTTGTGTGTACCTGTGTGCATGTATGTGTGTTTCTCTACTGAGCCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TATAGCTCCCAGACCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCGGCGCTTTTATGTCCTaGTTCCCAGGCGCTAAGGAC +
Preference number: 4 (lower is better)
Translates to: YSSQTLAGLQHLQRRKRCGAFMS*FPGAKD
Trigger: GTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGCC...GCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAGCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTCTGGTGGGAACTACATaGATTCTACCGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPLVGTT*ILPLAA
Trigger: GGCAGCCAGCGGTAGAATCCATGTAGTTCCCACCAG...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp CAATACACAGCTAATCTCTGCAGAGGGCTCCGGGTGAAGAAAGGGAGCGAGGGGGGGGAAGGCAACTGGTaGGAACTACATGGATTCTAC +
Preference number: 4 (lower is better)
Translates to: QYTANLCRGLRVKKGSEGGEGNW*ELHGFY
Trigger: GTAGAATCCATGTAGTTCCCACCAGTTGCCTTCCCC...CCCCTCGCTCCCTTTCTTCACCCGGAGCCCTCTGCAGAGATTAGCTGTGTATTG
54% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TATAGCTCCCAGACCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCAGGAGGAAGAGATGCTaGGCCCAGATCCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: YSSQTLAGLQHLQRRKRCRRKRC*AQIPGS
Trigger: AGATCCTGGGATCTGGGCCCAGCATCTCTTCCTCCT...GCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAGCTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TGGCAGGGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTCGATTCATAATGGTGTaGCATGTCCGGCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: WQGQGKDKGQARETVGFIRFIMV*HVRLQE
Trigger: CTCCTGCAGCCGGACATGTCACACCATTATGAATCG...AATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp GGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTTTCTTGTCTTCCTTCCATCCCTaGGGGGAAGGCAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: GQGKDKGQARETVGFIFLSSFHP*GEGNWW
Trigger: CCACCAGTTGCCTTCCCCTCAGGGATGGAAGGAAGA...CAAGAAAATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp GGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATACCCCACCAAGGATCTTGGACATGGTaGATAAGATGGGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GLNQRWRGKGLVPSIPHQGSWTW*IRWGLP
Trigger: AGGGAGACCCCATCTTATTCACCATGTCCAAGATCC...TTGGTGGGGTATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TCTCCCTCCGGAAACCCTAGGGGCAGAAGCACTTTAAGTGGGATGAAAGGGACCTGGCAGTTGTGCAAATaGTTCTTCTTGCCCCCATCG +
Preference number: 4 (lower is better)
Translates to: SPSGNPRGRSTLSGMKGTWQLCK*FFLPPS
Trigger: CGATGGGGGCAAGAAGAAGCATTTGCACAACTGCCA...GGTCCCTTTCATCCCACTTAAAGTGCTTCTGCCCCTAGGGTTTCCGGAGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp GGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTTTCTTGGACGCGGCTGCAGACTaGACAGGGGAACTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: GQGKDKGQARETVGFIFLDAAAD*TGELLG
Trigger: ACCAAGAAGTTCCCCTGTGCAGTCTGCAGCCGCGTC...CAAGAAAATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp GGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATACCCCACCAAGATTCTACCGCTGGCTaGCTTGAAAACACACCTAGG +
Preference number: 4 (lower is better)
Translates to: GLNQRWRGKGLVPSIPHQDSTAG*LENTPR
Trigger: CCTAGGTGTGTTTTCAAGGCAGCCAGCGGTAGAATC...TTGGTGGGGTATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TTCCTTCATGGCTCCAACAGACTGGGTCTGAAAGGGTTAATAAGGAAGCTCATCCCGCCCCGTCCAGGCTaGAATCCAGCCCTTGAGACT +
Preference number: 4 (lower is better)
Translates to: FLHGSNRLGLKGLIRKLIPPRPG*NPALET
Trigger: AGTCTCAAGGGCTGGATTCCAGCCTGGACGGGGCGG...GATGAGCTTCCTTATTAACCCTTTCAGACCCAGTCTGTTGGAGCCATGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TTCCTTCATGGCTCCAACAGACTGGGTCTGAAAGGGTTAATAAGGAAGCTCATCCAGCCGCCTCCTCCTTaGCGCCCTCGTGGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: FLHGSNRLGLKGLIRKLIQPPPP*RPRGFS
Trigger: TGAAAACCCACGAGGGCGCCAAGGAGGAGGCGGCTG...GATGAGCTTCCTTATTAACCCTTTCAGACCCAGTCTGTTGGAGCCATGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp CAGCTCCTACCGACCCAGTCAAATTCATCCTGCCTAGTAGCCCCAGAGACTAAGCAGAAGCACTTTAAGTaGGATGAAAGGGACCCCGCC +
Preference number: 4 (lower is better)
Translates to: QLLPTQSNSSCLVAPETKQKHFK*DERDPA
Trigger: GGCGGGGTCCCTTTCATCCCACTTAAAGTGCTTCTG...CTTAGTCTCTGGGGCTACTAGGCAGGATGAATTTGACTGGGTCGGTAGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTATGGGGACAGCTTCCTaGATGTCACCTCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPMGTAS*MSPQKA
Trigger: TGCCTTCTGAGGTGACATCCAGGAAGCTGTCCCCAT...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp ATTTTAGAAGAGGACTTCCCTACTCGCCCCCTCCATCTATCTCGGTCCTTTATCCAGGGAAGGGGTGGCTaGTTTCGATGGGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ILEEDFPTRPLHLSRSFIQGRGG*FRWVEE
Trigger: CTCCTCCACCCATCGAAACCAGCCACCCCTTCCCTG...GATAAAGGACCGAGATAGATGGAGGGGGCGAGTAGGGAAGTCCTCTTCTAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TCTCCCTCCGGAAACCCTAGGGGCAGAAGCACTTTAAGTGGGATGAAAGGGACCCAGTCAAATTCATCCTaGCTAGTAGCCCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: SPSGNPRGRSTLSGMKGTQSNSS*LVAPET
Trigger: AGTCTCTGGGGCTACTAGGCAGGATGAATTTGACTG...GGTCCCTTTCATCCCACTTAAAGTGCTTCTGCCCCTAGGGTTTCCGGAGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp GAGGGGAGCAGAAGAAAACCTATCCAAAGCCTCTACCCGCATACCTCAGAGCTTTACACAGCTAATCTCTaGAGAGGGCTCCGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: EGSRRKPIQSLYPHTSELYTANL*RGLRVK
Trigger: CTTCACCCGGAGCCCTCTGCAGAGATTAGCTGTGTA...AAGCTCTGAGGTATGCGGGTAGAGGCTTTGGATAGGTTTTCTTCTGCTCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp ATTTTAGAAGAGGACTTCCCTACTCGCCCCCTCCATCTATCTCGGTCCTTTATCTCCTTGGCGCCCTCGTaGGTTTTCATGTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ILEEDFPTRPLHLSRSFISLAPS*VFMCLA
Trigger: GGCCAAGCACATGAAAACCCACGAGGGCGCCAAGGA...GATAAAGGACCGAGATAGATGGAGGGGGCGAGTAGGGAAGTCCTCTTCTAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TTCCTTCATGGCTCCAACAGACTGGGTCTGAAAGGGTTAATAAGGAAGCTCATCGGCCTCCACTCTGAGTaGGAACCAGTGGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: FLHGSNRLGLKGLIRKLIGLHSE*EPVEVP
Trigger: AGGGACCTCCACTGGTTCCCACTCAGAGTGGAGGCC...GATGAGCTTCCTTATTAACCCTTTCAGACCCAGTCTGTTGGAGCCATGAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TCTCCCTCCGGAAACCCTAGGGGCAGAAGCACTTTAAGTGGGATGAAAGGGACCCTAATGAACATGCTATaGCAGGGGCAAGGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: SPSGNPRGRSTLSGMKGTLMNML*QGQGKD
Trigger: GTCTTTCCCTTGCCCCTGCCATAGCATGTTCATTAG...GGTCCCTTTCATCCCACTTAAAGTGCTTCTGCCCCTAGGGTTTCCGGAGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp CAGCTCCTACCGACCCAGTCAAATTCATCCTGCCTAGTAGCCCCAGAGACTAAGGCTGGTTTCGATGGGTaGAGGAGAAAGGCATCTTAC +
Preference number: 4 (lower is better)
Translates to: QLLPTQSNSSCLVAPETKAGFDG*RRKASY
Trigger: GTAAGATGCCTTTCTCCTCCACCCATCGAAACCAGC...CTTAGTCTCTGGGGCTACTAGGCAGGATGAATTTGACTGGGTCGGTAGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp AATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATACCCCACCAAATCCCTCCAGCAACACCCATTTaGGAGTTCCCCTTAGGATGG +
Preference number: 4 (lower is better)
Translates to: NQRWRGKGLVPSIPHQIPPATPI*EFPLGW
Trigger: CCATCCTAAGGGGAACTCCCAAATGGGTGTTGCTGG...AGGGATTTGGTGGGGTATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTACTTTTCCTCCTCCCTaGATAAATACGCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPTFPPP*INTHLP
Trigger: GGGAAGGTGCGTATTTATTCAGGGAGGAGGAAAAGT...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp AATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATACCCCACCAAATCCCTCCAAGAATTAAGGGCTaGATCAGAGGTGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: NQRWRGKGLVPSIPHQIPPRIKG*IRGGEG
Trigger: TCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTGG...AGGGATTTGGTGGGGTATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TTCCTTCATGGCTCCAACAGACTGGGTCTGAAAGGGTTAATAAGGAAGCTCATCTCTTCCTTCCATCCCTaGGGGGAAGGCAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: FLHGSNRLGLKGLIRKLISSFHP*GEGNWW
Trigger: CCACCAGTTGCCTTCCCCTCAGGGATGGAAGGAAGA...GATGAGCTTCCTTATTAACCCTTTCAGACCCAGTCTGTTGGAGCCATGAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TTCCTTCATGGCTCCAACAGACTGGGTCTGAAAGGGTTAATAAGGAAGCTCATCCTTTATCGCCAGCCCTaGCTGGGAGGCTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: FLHGSNRLGLKGLIRKLILYRQP*LGGCQE
Trigger: TTCCTGACAGCCTCCCAGCCAGGGCTGGCGATAAAG...GATGAGCTTCCTTATTAACCCTTTCAGACCCAGTCTGTTGGAGCCATGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GACTGCCTAGAAAGACAGGCAGCCAAGCAGCCTAGATCTATAAAAGAGGGGAGCCAGAACCCCTTCCAGTaGGAGAACAACTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: DCLERQAAKQPRSIKEGSQNPFQ*ENNSFL
Trigger: GAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTG...GCTCCCCTCTTTTATAGATCTAGGCTGCTTGGCTGCCTGTCTTTCTAGGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp CAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATCTCCCAGACCTTGGCTaGGCTCCAGCATCTACAAAG +
Preference number: 4 (lower is better)
Translates to: QELRAESEVEREGVSSFHLPDLG*APASTK
Trigger: CTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAG...ATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GACTGCCTAGAAAGACAGGCAGCCAAGCAGCCTAGATCTATAAAAGAGGGGAGCGCTGGTTTCGATGGGTaGAGGAGAAAGGCATCTTAC +
Preference number: 4 (lower is better)
Translates to: DCLERQAAKQPRSIKEGSAGFDG*RRKASY
Trigger: GTAAGATGCCTTTCTCCTCCACCCATCGAAACCAGC...GCTCCCCTCTTTTATAGATCTAGGCTGCTTGGCTGCCTGTCTTTCTAGGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp ACCCCAGGCTCAGTAGAGAAACACACATACATGCACACAGGTACACACAACATGGGTGGCTGGTTTCGATaGGTGGAGGAGAAAGGCATC +
Preference number: 4 (lower is better)
Translates to: TPGSVEKHTYMHTGTHNMGGWFR*VEEKGI
Trigger: GATGCCTTTCTCCTCCACCCATCGAAACCAGCCACC...CATGTTGTGTGTACCTGTGTGCATGTATGTGTGTTTCTCTACTGAGCCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTTTCTTGGAGTTCCCCTTAGGATaGCCACTGGAAAAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GQGKDKGQARETVGFIFLEFPLG*PLEKAV
Trigger: GACAGCCTTTTCCAGTGGCCATCCTAAGGGGAACTC...CAAGAAAATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp ATTTTAGAAGAGGACTTCCCTACTCGCCCCCTCCATCTATCTCGGTCCTTTATCCGATTCATAATGGTGTaGCATGTCCGGCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ILEEDFPTRPLHLSRSFIRFIMV*HVRLQE
Trigger: CTCCTGCAGCCGGACATGTCACACCATTATGAATCG...GATAAAGGACCGAGATAGATGGAGGGGGCGAGTAGGGAAGTCCTCTTCTAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TTCCTTCATGGCTCCAACAGACTGGGTCTGAAAGGGTTAATAAGGAAGCTCATCGCAAATGCTTCTTCTTaGCCCCATCGGGCCCACATG +
Preference number: 4 (lower is better)
Translates to: FLHGSNRLGLKGLIRKLIANASS*PHRAHM
Trigger: CATGTGGGCCCGATGGGGGCAAGAAGAAGCATTTGC...GATGAGCTTCCTTATTAACCCTTTCAGACCCAGTCTGTTGGAGCCATGAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TTTATCATAGACCAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGAACAGAGGGGCATTaGGCAGCTCCTACCGACCCA +
Preference number: 4 (lower is better)
Translates to: FIIDQELRAESEVEREGVRTEGH*AAPTDP
Trigger: TGGGTCGGTAGGAGCTGCGCAATGCCCCTCTGTTCT...AACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTGGTCTATGATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TTTATCATAGACCAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTCACAGGGGAACTTCTTaGTGCCGGTGTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: FIIDQELRAESEVEREGVHRGTS*CRCGSG
Trigger: TCCAGACCCACACCGGCACCAAGAAGTTCCCCTGTG...AACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTGGTCTATGATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp ACCCCAGGCTCAGTAGAGAAACACACATACATGCACACAGGTACACACAACATGGGGCTGAATCAGAGGTaGAGAGGGAAGGGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: TPGSVEKHTYMHTGTHNMGLNQR*RGKGLV
Trigger: AACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCC...CATGTTGTGTGTACCTGTGTGCATGTATGTGTGTTTCTCTACTGAGCCTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp GACTGCCTAGAAAGACAGGCAGCCAAGCAGCCTAGATCTATAAAAGAGGGGAGCCTAATGAACATGCTATaGCAGGGGCAAGGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: DCLERQAAKQPRSIKEGSLMNML*QGQGKD
Trigger: GTCTTTCCCTTGCCCCTGCCATAGCATGTTCATTAG...GCTCCCCTCTTTTATAGATCTAGGCTGCTTGGCTGCCTGTCTTTCTAGGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TTCCTTCATGGCTCCAACAGACTGGGTCTGAAAGGGTTAATAAGGAAGCTCATCGGTGGCTGGTTTCGATaGGTGGAGGAGAAAGGCATC +
Preference number: 4 (lower is better)
Translates to: FLHGSNRLGLKGLIRKLIGGWFR*VEEKGI
Trigger: GATGCCTTTCTCCTCCACCCATCGAAACCAGCCACC...GATGAGCTTCCTTATTAACCCTTTCAGACCCAGTCTGTTGGAGCCATGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp ACCCCAGGCTCAGTAGAGAAACACACATACATGCACACAGGTACACACAACATGGAGTTCCCCTTAGGATaGCCACTGGAAAAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: TPGSVEKHTYMHTGTHNMEFPLG*PLEKAV
Trigger: GACAGCCTTTTCCAGTGGCCATCCTAAGGGGAACTC...CATGTTGTGTGTACCTGTGTGCATGTATGTGTGTTTCTCTACTGAGCCTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp ATTTTAGAAGAGGACTTCCCTACTCGCCCCCTCCATCTATCTCGGTCCTTTATCGGGATGTGGCAGTTGTaGAAATGCTTCTTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: ILEEDFPTRPLHLSRSFIGMWQL*KCFFLP
Trigger: GGGCAAGAAGAAGCATTTGCACAACTGCCACATCCC...GATAAAGGACCGAGATAGATGGAGGGGGCGAGTAGGGAAGTCCTCTTCTAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp CAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATGGGGAAGGCAACTGGTaGGAACTACATGGATTCTAC +
Preference number: 4 (lower is better)
Translates to: QELRAESEVEREGVSSFHGEGNW*ELHGFY
Trigger: GTAGAATCCATGTAGTTCCCACCAGTTGCCTTCCCC...ATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TTTATCATAGACCAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTCTGGGTGAGTCGGCCTaGACCACGATTCATAATGGT +
Preference number: 4 (lower is better)
Translates to: FIIDQELRAESEVEREGVLGESA*TTIHNG
Trigger: ACCATTATGAATCGTGGTTCAGGCCGACTCACCCAG...AACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTGGTCTATGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TATAGCTCCCAGACCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCGGTTTATTTTCTTGGTaGCAGCTAAAGAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: YSSQTLAGLQHLQRRKRCGLFSW*QLKRWS
Trigger: TGACCATCTCTTTAGCTGTCACCAAGAAAATAAACC...GCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAGCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR GCA 90 bp TTCCTTCATGGCTCCAACAGACTGGGTCTGAAAGGGTTAATAAGGAAGCTCATCTGGCAGTTGTGCAAATaGTTCTTCTTGCCCCCATCG +
Preference number: 4 (lower is better)
Translates to: FLHGSNRLGLKGLIRKLIWQLCK*FFLPPS
Trigger: CGATGGGGGCAAGAAGAAGCATTTGCACAACTGCCA...GATGAGCTTCCTTATTAACCCTTTCAGACCCAGTCTGTTGGAGCCATGAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TTCCTTCATGGCTCCAACAGACTGGGTCTGAAAGGGTTAATAAGGAAGCTCATCTTCCCTCTTCCTTCATaGCTCCAACAGACTGGGTCT +
Preference number: 4 (lower is better)
Translates to: FLHGSNRLGLKGLIRKLIFPLPS*LQQTGS
Trigger: AGACCCAGTCTGTTGGAGCCATGAAGGAAGAGGGAA...GATGAGCTTCCTTATTAACCCTTTCAGACCCAGTCTGTTGGAGCCATGAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp TTCCTTCATGGCTCCAACAGACTGGGTCTGAAAGGGTTAATAAGGAAGCTCATCACTTTTCCTCCTCCCTaGATAAATACGCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: FLHGSNRLGLKGLIRKLITFPPP*INTHLP
Trigger: GGGAAGGTGCGTATTTATTCAGGGAGGAGGAAAAGT...GATGAGCTTCCTTATTAACCCTTTCAGACCCAGTCTGTTGGAGCCATGAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CCA 90 bp TTTATCATAGACCAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTCAGAACCCCTTCCAGTaGGAGAACAACTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: FIIDQELRAESEVEREGVQNPFQ*ENNSFL
Trigger: GAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTG...AACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTGGTCTATGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR TCA 90 bp ACCCCAGGCTCAGTAGAGAAACACACATACATGCACACAGGTACACACAACATGGGTTTATTTTCTTGGTaGCAGCTAAAGAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: TPGSVEKHTYMHTGTHNMGLFSW*QLKRWS
Trigger: TGACCATCTCTTTAGCTGTCACCAAGAAAATAAACC...CATGTTGTGTGTACCTGTGTGCATGTATGTGTGTTTCTCTACTGAGCCTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS TCA 90 bp CTCGAGGCTGCGGCGGGCTCCGGGCACGGCTGGCTGGTGCGCTACTaGCGGTCGCTCATAGGCCCTGTGCGCCGGCGAGCTCTCCAGCGG +
Preference number: 5 (lower is better)
Translates to: LEAAAGSGHGWLVRY*RSLIGPVRRRALQR
Trigger: CCGCTGGAGAGCTCGCCGGCGCACAGGGCCTATGAGCGACCGTCAGTAGCGCACCAGCCAGCCGTGCCCGGAGCCCGCCGCAGCCTCGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536300.2
CDS GCA 90 bp GGCTGCAGGTCGAGGCGCGGCGGGGAGGCGTGCGGCGCTTCCGTGTaGTGGCTGCCCAGAGAGCCGCAGACAGCGGTTAGCATTGCCGGG +
Preference number: 5 (lower is better)
Translates to: GCRSRRGGEACGASV*WLPREPQTAVSIAG
Trigger: CCCGGCAATGCTAACCGCTGTCTGCGGCTCTCTGGGCAGCCAGCACACGGAAGCGCCGCACGCCTCCCCGCCGCGCCTCGACCTGCAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS CCA 90 bp TGCAGGTCGAGGCGCGGCGGGGAGGCGTGCGGCGCTTCCGTGTGCTaGCTGCCCAGAGAGCCGCAGACAGCGGTTAGCATTGCCGGGATC +
Preference number: 5 (lower is better)
Translates to: CRSRRGGEACGASVC*LPREPQTAVSIAGI
Trigger: GATCCCGGCAATGCTAACCGCTGTCTGCGGCTCTCTGGGCAGCCAGCACACGGAAGCGCCGCACGCCTCCCCGCCGCGCCTCGACCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS CCA 90 bp GCACCGACCGCCGGGAGCCTTTGGGACGCGCCGCCCCGTCCAGGCTaGAATCCAGCCCTTGAGACTCCGGGGCGGCTACTTCCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: APTAGSLWDAPPRPG*NPALETPGRLLPRP
Trigger: AGGCCTTGGAAGTAGCCGCCCCGGAGTCTCAAGGGCTGGATTCCAGCCTGGACGGGGCGGCGCGTCCCAAAGGCTCCCGGCGGTCGGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS GCA 90 bp GCGGCTACTTCCAAGGCCTTAGCCCCGTCGGGCGGCCCTAGGAGATaGTGCCCTCCGGCAGCTGGAAGGAGGTGGTGCGCATGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: AATSKALAPSGGPRR*CPPAAGRRWCACGW
Trigger: CCACCCGCATGCGCACCACCTCCTTCCAGCTGCCGGAGGGCAGCATCTCCTAGGGCCGCCCGACGGGGCTAAGGCCTTGGAAGTAGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS GCA 90 bp GTGAGGTCAGCGCGCCCTGAGTGTGGGGGAGGTCCATCCAGCTGGTaGCCGGATGAAGGTCCCACCACGAGCCATCCTCCGCGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: VRSARPECGGGPSSW*PDEGPTTSHPPRLG
Trigger: ACCCAGGCGCGGAGGATGGCTCGTGGTGGGACCTTCATCCGGGCACCAGCTGGATGGACCTCCCCCACACTCAGGGCGCGCTGACCTCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS GCA 90 bp GCTACTTCCAAGGCCTTAGCCCCGTCGGGCGGCCCTAGGAGATGCTaGCCTCCGGCAGCTGGAAGGAGGTGGTGCGCATGCGGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: ATSKALAPSGGPRRC*PPAAGRRWCACGWG
Trigger: ACCCCACCCGCATGCGCACCACCTCCTTCCAGCTGCCGGAGGGCAGCATCTCCTAGGGCCGCCCGACGGGGCTAAGGCCTTGGAAGTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS CCA 90 bp CAGGTGAGGTCAGCGCGCCCTGAGTGTGGGGGAGGTCCATCCAGCTaGTGCCCGGATGAAGGTCCCACCACGAGCCATCCTCCGCGCCTG +
Preference number: 5 (lower is better)
Translates to: QVRSARPECGGGPSS*CPDEGPTTSHPPRL
Trigger: CAGGCGCGGAGGATGGCTCGTGGTGGGACCTTCATCCGGGCACCAGCTGGATGGACCTCCCCCACACTCAGGGCGCGCTGACCTCACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS CCA 90 bp ACTGTCGCTTTCCAGGTCCTCGCAGGTTACCCGCGAGGAGGCCCCTaGCAGCTCATAGCCCTGCGAGAAGTCCACCTCCGGGCCCAGCGG +
Preference number: 5 (lower is better)
Translates to: TVAFQVLAGYPRGGP*QLIALREVHLRAQR
Trigger: CCGCTGGGCCCGGAGGTGGACTTCTCGCAGGGCTATGAGCTGCCAGGGGCCTCCTCGCGGGTAACCTGCGAGGACCTGGAAAGCGACAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp TTCCTCAAGCCACCCCCAAGGACGTCAGACCTGGGGGCTCGCATCCAGTGCCCCGCTGGAATCCAGCCCTaGAGACTCCGGGGCGGCTAC +
Preference number: 5 (lower is better)
Translates to: FLKPPPRTSDLGARIQCPAGIQP*RLRGGY
Trigger: GTAGCCGCCCCGGAGTCTCAAGGGCTGGATTCCAGC...GGGGCACTGGATGCGAGCCCCCAGGTCTGACGTCCTTGGGGGTGGCTTGAGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS TCA 90 bp GAAGGTCCCACCACGAGCCATCCTCCGCGCCTGGGTGAGTCGGCCTaGACCACGATTCATAATGGTGTGACATGTCCGGCTGCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: EGPTTSHPPRLGESA*TTIHNGVTCPAAGA
Trigger: AGCTCCTGCAGCCGGACATGTCACACCATTATGAATCGTGGTTCAGGCCGACTCACCCAGGCGCGGAGGATGGCTCGTGGTGGGACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp CAATACACAGCTAATCTCTGCAGAGGGCTCCGGGTGAAGAAAGGGAGCGAGGGGGCACAGGGGAACTTCTaGGTGCCGGTGTGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: QYTANLCRGLRVKKGSEGAQGNF*VPVWVW
Trigger: CCAGACCCACACCGGCACCAAGAAGTTCCCCTGTGC...CCCCTCGCTCCCTTTCTTCACCCGGAGCCCTCTGCAGAGATTAGCTGTGTATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp TGCCCCCAACCCTCTCAGCAAGGAAGGGGATCTCTGGTTGGGTTAGCAGGAGGTTCCGGGGACTGGGACTaGCTGTCTCCTCTAGCCTGT +
Preference number: 5 (lower is better)
Translates to: CPQPSQQGRGSLVGLAGGSGDWD*LSPLAC
Trigger: ACAGGCTAGAGGAGACAGCAAGTCCCAGTCCCCGGA...ACCTCCTGCTAACCCAACCAGAGATCCCCTTCCTTGCTGAGAGGGTTGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp TATAGCTCCCAGACCTTGGCTGGGCTCCAGCATCTACAAAGGAGGAAGAGATGCGAGAACAGAGGGGCATaGCGCAGCTCCTACCGACCC +
Preference number: 5 (lower is better)
Translates to: YSSQTLAGLQHLQRRKRCENRGA*RSSYRP
Trigger: GGGTCGGTAGGAGCTGCGCAATGCCCCTCTGTTCTC...GCATCTCTTCCTCCTTTGTAGATGCTGGAGCCCAGCCAAGGTCTGGGAGCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp GCGCTTTTATGTCCTGGTTCCCAGGCGCTAAGGACGTGTCCAGACAGCCACCACACCAGCAACACCCATTaGGGAGTTCCCCTTAGGATG +
Preference number: 5 (lower is better)
Translates to: ALLCPGSQALRTCPDSHHTSNTH*GVPLRM
Trigger: CATCCTAAGGGGAACTCCCAAATGGGTGTTGCTGGT...GTGGTGGCTGTCTGGACACGTCCTTAGCGCCTGGGAACCAGGACATAAAAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp CAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATGCTGGAATCCAGCCCTaGAGACTCCGGGGCGGCTAC +
Preference number: 5 (lower is better)
Translates to: QELRAESEVEREGVSSFHAGIQP*RLRGGY
Trigger: GTAGCCGCCCCGGAGTCTCAAGGGCTGGATTCCAGC...ATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp ATTTTAGAAGAGGACTTCCCTACTCGCCCCCTCCATCTATCTCGGTCCTTTATCTCCGCCTCCAGACAGTaGGGGCAGCGACAGACGGTC +
Preference number: 5 (lower is better)
Translates to: ILEEDFPTRPLHLSRSFISASRQ*GQRQTV
Trigger: GACCGTCTGTCGCTGCCCCAACTGTCTGGAGGCGGA...GATAAAGGACCGAGATAGATGGAGGGGGCGAGTAGGGAAGTCCTCTTCTAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp CAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTAGTTCCTTCCATTCCGCCTCCAGACAGTaGGGGCAGCGACAGACGGTC +
Preference number: 5 (lower is better)
Translates to: QELRAESEVEREGVSSFHSASRQ*GQRQTV
Trigger: GACCGTCTGTCGCTGCCCCAACTGTCTGGAGGCGGA...ATGGAAGGAACTAACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp CTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTTCCCTGCAAATGCTTCTTCTaGCCCCCATCGGGCCCACAT +
Preference number: 5 (lower is better)
Translates to: LRRQNPFQWENNSFLSLPCKCFF*PPSGPH
Trigger: ATGTGGGCCCGATGGGGGCAAGAAGAAGCATTTGCA...GGGAAGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp GGGCAAGGGAAAGACAAGGGCCAAGCTAGAGAGACAGTGGGGTTTATTTTCTTGGAGAACAGAGGGGCATaGCGCAGCTCCTACCGACCC +
Preference number: 5 (lower is better)
Translates to: GQGKDKGQARETVGFIFLENRGA*RSSYRP
Trigger: GGGTCGGTAGGAGCTGCGCAATGCCCCTCTGTTCTC...CAAGAAAATAAACCCCACTGTCTCTCTAGCTTGGCCCTTGTCTTTCCCTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp CAATACACAGCTAATCTCTGCAGAGGGCTCCGGGTGAAGAAAGGGAGCGAGGGGACCAGCAACACCCATTaGGGAGTTCCCCTTAGGATG +
Preference number: 5 (lower is better)
Translates to: QYTANLCRGLRVKKGSEGTSNTH*GVPLRM
Trigger: CATCCTAAGGGGAACTCCCAAATGGGTGTTGCTGGT...CCCCTCGCTCCCTTTCTTCACCCGGAGCCCTCTGCAGAGATTAGCTGTGTATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp TCACCTCAGAAGGCAGAACCCCTTCCAGTGGGAGAACAACTCTTTCCTCTCCCTCCCGGGATGTGGCAGTaGTGCAAATGCTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SPQKAEPLPVGEQLFPLPPGMWQ*CKCFFL
Trigger: CAAGAAGAAGCATTTGCACAACTGCCACATCCCGGG...AGGGAGAGGAAAGAGTTGTTCTCCCACTGGAAGGGGTTCTGCCTTCTGAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp ACCCCAGGCTCAGTAGAGAAACACACATACATGCACACAGGTACACACAACATGTCCGGGGACTGGGACTaGCTGTCTCCTCTAGCCTGT +
Preference number: 5 (lower is better)
Translates to: TPGSVEKHTYMHTGTHNMSGDWD*LSPLAC
Trigger: ACAGGCTAGAGGAGACAGCAAGTCCCAGTCCCCGGA...CATGTTGTGTGTACCTGTGTGCATGTATGTGTGTTTCTCTACTGAGCCTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp TTTATCATAGACCAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTGCACAGGGGAACTTCTaGGTGCCGGTGTGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: FIIDQELRAESEVEREGVAQGNF*VPVWVW
Trigger: CCAGACCCACACCGGCACCAAGAAGTTCCCCTGTGC...AACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTGGTCTATGATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp ACCCCAGGCTCAGTAGAGAAACACACATACATGCACACAGGTACACACAACATGCCCGGGATGTGGCAGTaGTGCAAATGCTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TPGSVEKHTYMHTGTHNMPGMWQ*CKCFFL
Trigger: CAAGAAGAAGCATTTGCACAACTGCCACATCCCGGG...CATGTTGTGTGTACCTGTGTGCATGTATGTGTGTTTCTCTACTGAGCCTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp GACTGCCTAGAAAGACAGGCAGCCAAGCAGCCTAGATCTATAAAAGAGGGGAGCGTGGGGTTTATTTTCTaGGTGACAGCTAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: DCLERQAAKQPRSIKEGSVGFIF*VTAKEM
Trigger: CATCTCTTTAGCTGTCACCAAGAAAATAAACCCCAC...GCTCCCCTCTTTTATAGATCTAGGCTGCTTGGCTGCCTGTCTTTCTAGGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS-3UTR CAA 90 bp TTTATCATAGACCAAGAATTAAGGGCTGAATCAGAGGTGGAGAGGGAAGGGGTTGTGGGGTTTATTTTCTaGGTGACAGCTAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: FIIDQELRAESEVEREGVVGFIF*VTAKEM
Trigger: CATCTCTTTAGCTGTCACCAAGAAAATAAACCCCAC...AACCCCTTCCCTCTCCACCTCTGATTCAGCCCTTAATTCTTGGTCTATGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS CCA 72 bp GGCCTGAGCTGCGGGGCACCGACCGCCGGGAGCCTTTaGGACGCGCCGCCCCGTCCAGGCTGGAATCCAGCC +
Preference number: 6 (lower is better)
Translates to: GLSCGAPTAGSL*DAPPRPGWNPA
Trigger: GGCTGGATTCCAGCCTGGACGGGGCGGCGCGTCCCAAAGGCTCCCGGCGGTCGGTGCCCCGCAGCTCAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS TCA 72 bp GCGGCGGGCTCCGGGCACGGCTGGCTGGTGCGCTACTaGCGGTCGCTCATAGGCCCTGTGCGCCGGCGAGCT +
Preference number: 6 (lower is better)
Translates to: AAGSGHGWLVRY*RSLIGPVRRRA
Trigger: AGCTCGCCGGCGCACAGGGCCTATGAGCGACCGTCAGTAGCGCACCAGCCAGCCGTGCCCGGAGCCCGCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536300.2
CDS GCA 72 bp TGGAGAGGCTGCAGGTCGAGGCGCGGCGGGGAGGCGTaGGGCGCTTCCGTGTGCTGGCTGCCCAGAGAGCCG +
Preference number: 6 (lower is better)
Translates to: WRGCRSRRGGEA*GASVCWLPREP
Trigger: CGGCTCTCTGGGCAGCCAGCACACGGAAGCGCCGCACGCCTCCCCGCCGCGCCTCGACCTGCAGCCTCTCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS CAA 72 bp TGGCCTGAGCTGCGGGGCACCGACCGCCGGGAGCCTTaGGGACGCGCCGCCCCGTCCAGGCTGGAATCCAGC +
Preference number: 6 (lower is better)
Translates to: WPELRGTDRREP*GRAAPSRLESS
Trigger: GCTGGATTCCAGCCTGGACGGGGCGGCGCGTCCCAAAGGCTCCCGGCGGTCGGTGCCCCGCAGCTCAGGCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS TCA 72 bp AGCGCCCCCGGGTGGCCAGGTGAGGTCAGCGCGCCCTaGGTGTGGGGGAGGTCCATCCAGCTGGTGCCCGGA +
Preference number: 6 (lower is better)
Translates to: SAPGWPGEVSAP*VWGRSIQLVPG
Trigger: TCCGGGCACCAGCTGGATGGACCTCCCCCACACTCAGGGCGCGCTGACCTCACCTGGCCACCCGGGGGCGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS GCA 72 bp TCGAGGCGCGGCGGGGAGGCGTGCGGCGCTTCCGTGTaGTGGCTGCCCAGAGAGCCGCAGACAGCGGTTAGC +
Preference number: 6 (lower is better)
Translates to: SRRGGEACGASV*WLPREPQTAVS
Trigger: GCTAACCGCTGTCTGCGGCTCTCTGGGCAGCCAGCACACGGAAGCGCCGCACGCCTCCCCGCCGCGCCTCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS GCA 72 bp GACAGTTGGGGCAGCGACAGACGGTCTGGCCTGAGCTaGGGGGCACCGACCGCCGGGAGCCTTTGGGACGCG +
Preference number: 6 (lower is better)
Translates to: DSWGSDRRSGLS*GAPTAGSLWDA
Trigger: CGCGTCCCAAAGGCTCCCGGCGGTCGGTGCCCCGCAGCTCAGGCCAGACCGTCTGTCGCTGCCCCAACTGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS GCA 72 bp GGCGGCACTGAGGAGCTCAGTTGGAGGGAGCCACGCTaGCCTCGGCCTCGCGTTTGCCTTTGCCCCCGGGGG +
Preference number: 6 (lower is better)
Translates to: GGTEELSWREPR*PRPRVCLCPRG
Trigger: CCCCCGGGGGCAAAGGCAAACGCGAGGCCGAGGGCAGCGTGGCTCCCTCCAACTGAGCTCCTCAGTGCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS TCA 72 bp CTCCAGACAGTTGGGGCAGCGACAGACGGTCTGGCCTaGGCTGCGGGGCACCGACCGCCGGGAGCCTTTGGG +
Preference number: 6 (lower is better)
Translates to: LQTVGAATDGLA*AAGHRPPGAFG
Trigger: CCCAAAGGCTCCCGGCGGTCGGTGCCCCGCAGCTCAGGCCAGACCGTCTGTCGCTGCCCCAACTGTCTGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS CCA 72 bp CCTCCGGCAGCTGGAAGGAGGTGGTGCGCATGCGGGTaGGGTGGCGGGGCACAAAGCTGGTGGTCTCCGACG +
Preference number: 6 (lower is better)
Translates to: PPAAGRRWCACG*GGGAQSWWSPT
Trigger: CGTCGGAGACCACCAGCTTTGTGCCCCGCCACCCCACCCGCATGCGCACCACCTCCTTCCAGCTGCCGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS CCA 72 bp GCCGGGAGCCTTTGGGACGCGCCGCCCCGTCCAGGCTaGAATCCAGCCCTTGAGACTCCGGGGCGGCTACTT +
Preference number: 6 (lower is better)
Translates to: AGSLWDAPPRPG*NPALETPGRLL
Trigger: AAGTAGCCGCCCCGGAGTCTCAAGGGCTGGATTCCAGCCTGGACGGGGCGGCGCGTCCCAAAGGCTCCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS TCA 72 bp GGACGCGCCGCCCCGTCCAGGCTGGAATCCAGCCCTTaGGACTCCGGGGCGGCTACTTCCAAGGCCTTAGCC +
Preference number: 6 (lower is better)
Translates to: GRAAPSRLESSP*DSGAATSKALA
Trigger: GGCTAAGGCCTTGGAAGTAGCCGCCCCGGAGTCTCAAGGGCTGGATTCCAGCCTGGACGGGGCGGCGCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS GCA 72 bp GCGCGCCCTGAGTGTGGGGGAGGTCCATCCAGCTGGTaGCCGGATGAAGGTCCCACCACGAGCCATCCTCCG +
Preference number: 6 (lower is better)
Translates to: ARPECGGGPSSW*PDEGPTTSHPP
Trigger: CGGAGGATGGCTCGTGGTGGGACCTTCATCCGGGCACCAGCTGGATGGACCTCCCCCACACTCAGGGCGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS GCA 72 bp AAGGCCTTAGCCCCGTCGGGCGGCCCTAGGAGATGCTaGCCTCCGGCAGCTGGAAGGAGGTGGTGCGCATGC +
Preference number: 6 (lower is better)
Translates to: KALAPSGGPRRC*PPAAGRRWCAC
Trigger: GCATGCGCACCACCTCCTTCCAGCTGCCGGAGGGCAGCATCTCCTAGGGCCGCCCGACGGGGCTAAGGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS CCA 72 bp GGCAGCTGGAAGGAGGTGGTGCGCATGCGGGTGGGGTaGCGGGGCACAAAGCTGGTGGTCTCCGACGTAGCC +
Preference number: 6 (lower is better)
Translates to: GSWKEVVRMRVG*RGTKLVVSDVA
Trigger: GGCTACGTCGGAGACCACCAGCTTTGTGCCCCGCCACCCCACCCGCATGCGCACCACCTCCTTCCAGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS CCA 72 bp TTCCAGGTCCTCGCAGGTTACCCGCGAGGAGGCCCCTaGCAGCTCATAGCCCTGCGAGAAGTCCACCTCCGG +
Preference number: 6 (lower is better)
Translates to: FQVLAGYPRGGP*QLIALREVHLR
Trigger: CCGGAGGTGGACTTCTCGCAGGGCTATGAGCTGCCAGGGGCCTCCTCGCGGGTAACCTGCGAGGACCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS CCA 72 bp TCAGCGCGCCCTGAGTGTGGGGGAGGTCCATCCAGCTaGTGCCCGGATGAAGGTCCCACCACGAGCCATCCT +
Preference number: 6 (lower is better)
Translates to: SARPECGGGPSS*CPDEGPTTSHP
Trigger: AGGATGGCTCGTGGTGGGACCTTCATCCGGGCACCAGCTGGATGGACCTCCCCCACACTCAGGGCGCGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS CCA 72 bp CGGATGAAGGTCCCACCACGAGCCATCCTCCGCGCCTaGGTGAGTCGGCCTGAACCACGATTCATAATGGTG +
Preference number: 6 (lower is better)
Translates to: RMKVPPRAILRA*VSRPEPRFIMV
Trigger: CACCATTATGAATCGTGGTTCAGGCCGACTCACCCAGGCGCGGAGGATGGCTCGTGGTGGGACCTTCATCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS TCA 72 bp ACCACGAGCCATCCTCCGCGCCTGGGTGAGTCGGCCTaGACCACGATTCATAATGGTGTGACATGTCCGGCT +
Preference number: 6 (lower is better)
Translates to: TTSHPPRLGESA*TTIHNGVTCPA
Trigger: AGCCGGACATGTCACACCATTATGAATCGTGGTTCAGGCCGACTCACCCAGGCGCGGAGGATGGCTCGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2
CDS TCA 72 bp TGGGTGAGTCGGCCTGAACCACGATTCATAATGGTGTaGCATGTCCGGCTGCAGGAGCTTGGAAAAGGGGCC +
Preference number: 6 (lower is better)
Translates to: WVSRPEPRFIMV*HVRLQELGKGA
Trigger: GGCCCCTTTTCCAAGCTCCTGCAGCCGGACATGTCACACCATTATGAATCGTGGTTCAGGCCGACTCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342234.3
ENST00000536300.2