RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000105866

Ensembl transcript IDs: ENST00000222584.8, ENST00000432066.2, ENST00000440636.1, ENST00000448246.1, ENST00000649633.1

Found 365 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCAACTGTGACAATTCTTGGGGAGCCAAGCACCTCTGTAACAGATaGGTCCAGTTCTCCCGAGGTAACAATGGCAAGAGCTGTCCCACC +
Preference number: 1 (lower is better)
Translates to: CNCDNSWGAKHLCNR*VQFSRGNNGKSCPT
Trigger: GGTGGGACAGCTCTTGCCATTGTTACCTCGGGAGAACTGGACTCATCTGTTACAGAGGTGCTTGGCTCCCCAAGAATTGTCACAGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR TCA 90 bp CAGGAACAGGCAACTCTTCGAAGCCTCTTGCCAGGTTGTACCTCTTaGTCAGAAGTCTGCTGGCCTTGCTGCAAATGCACTTGTGTGAGT +
Preference number: 1 (lower is better)
Translates to: QEQATLRSLLPGCTS*SEVCWPCCKCTCVS
Trigger: ACTCACACAAGTGCATTTGCAGCAAGGCCAGCAGACTTCTGATCAAGAGGTACAACCTGGCAAGAGGCTTCGAAGAGTTGCCTGTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR CAA 90 bp AAGCCTCTTGCCAGGTTGTACCTCTTGATCAGAAGTCTGCTGGCCTaGCTGCAAATGCACTTGTGTGAGTTGGTCAGGACTAACAGCACC +
Preference number: 2 (lower is better)
Translates to: KPLARLYLLIRSLLA*LQMHLCELVRTNST
Trigger: GGTGCTGTTAGTCCTGACCAACTCACACAAGTGCATTTGCAGCAAGGCCAGCAGACTTCTGATCAAGAGGTACAACCTGGCAAGAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR CAA 90 bp ACAGGAACAGGCAACTCTTCGAAGCCTCTTGCCAGGTTGTACCTCTaGATCAGAAGTCTGCTGGCCTTGCTGCAAATGCACTTGTGTGAG +
Preference number: 2 (lower is better)
Translates to: TGTGNSSKPLARLYL*IRSLLALLQMHLCE
Trigger: CTCACACAAGTGCATTTGCAGCAAGGCCAGCAGACTTCTGATCAAGAGGTACAACCTGGCAAGAGGCTTCGAAGAGTTGCCTGTTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR CAA 90 bp ACAATTAGGACAGGAACAGGCAACTCTTCGAAGCCTCTTGCCAGGTaGTACCTCTTGATCAGAAGTCTGCTGGCCTTGCTGCAAATGCAC +
Preference number: 2 (lower is better)
Translates to: TIRTGTGNSSKPLAR*YLLIRSLLALLQMH
Trigger: GTGCATTTGCAGCAAGGCCAGCAGACTTCTGATCAAGAGGTACAACCTGGCAAGAGGCTTCGAAGAGTTGCCTGTTCCTGTCCTAATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR CAA 90 bp TTGATCAGAAGTCTGCTGGCCTTGCTGCAAATGCACTTGTGTGAGTaGGTCAGGACTAACAGCACCTATCGTGGCATTAGCAATTCCTCC +
Preference number: 2 (lower is better)
Translates to: LIRSLLALLQMHLCE*VRTNSTYRGISNSS
Trigger: GGAGGAATTGCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACTCACACAAGTGCATTTGCAGCAAGGCCAGCAGACTTCTGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR CAA 90 bp TTGTACCTCTTGATCAGAAGTCTGCTGGCCTTGCTGCAAATGCACTaGTGTGAGTTGGTCAGGACTAACAGCACCTATCGTGGCATTAGC +
Preference number: 2 (lower is better)
Translates to: LYLLIRSLLALLQMH*CELVRTNSTYRGIS
Trigger: GCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACTCACACAAGTGCATTTGCAGCAAGGCCAGCAGACTTCTGATCAAGAGGTACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCTGGGAGGCGGCGGTTaGAGTAAGCTGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVLGGGG*SKLRSC
Trigger: GCACGATCTCAGCTTACTGCAACCGCCGCCTCCCAG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAAATGGCTGCAACTGTaGCAATTCTTGGGGAGCCAA +
Preference number: 2 (lower is better)
Translates to: HVLTPNPGILKEAKNENIKWLQL*QFLGSQ
Trigger: TTGGCTCCCCAAGAATTGTCACAGTTGCAGCCATTT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATGGCCTTGCTGCAAATaGACTTGTGTGAGTTGGTCA +
Preference number: 2 (lower is better)
Translates to: HVLTPNPGILKEAKNENIWPCCK*TCVSWS
Trigger: TGACCAACTCACACAAGTGCATTTGCAGCAAGGCCA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCAACACTTCACGTGTTaGCCCCAAACCCTGGAATAC +
Preference number: 2 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVQHFTC*PQTLEY
Trigger: GTATTCCAGGGTTTGGGGTCAACACGTGAAGTGTTG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCAACACTTCACGTGTTaGCCCCAAACCCTGGAATAC +
Preference number: 2 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFQHFTC*PQTLEY
Trigger: GTATTCCAGGGTTTGGGGTCAACACGTGAAGTGTTG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGAAGTCTGCTGGCCTTaGTGCAAATGCACTTGTGTG +
Preference number: 2 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVEVCWP*CKCTCV
Trigger: CACACAAGTGCATTTGCAGCAAGGCCAGCAGACTTC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGGTCTTTCTCCAGTATaGCAGCGAAGATGTGCTCGT +
Preference number: 2 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFGLSPV*QRRCAR
Trigger: ACGAGCACATCTTCGCTGGCATACTGGAGAAAGACC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCTCTTCGAAGCCTCTTaGCAGGTTGTACCTCTTGAT +
Preference number: 2 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVLFEAS*QVVPLD
Trigger: ATCAAGAGGTACAACCTGGCAAGAGGCTTCGAAGAG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAACTGTGACAATTCTTaGGGAGCCAAGCACCTCTGT +
Preference number: 2 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFNCDNS*GAKHLC
Trigger: ACAGAGGTGCTTGGCTCCCCAAGAATTGTCACAGTT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAACGCTACAAAGGGCTaGCCTAAAGTGTACATAGTG +
Preference number: 2 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVNATKG*PKVYIV
Trigger: CACTATGTACACTTTAGGCCAGCCCTTTGTAGCGTT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGTGGTAATAAAGATCTaGGATGCATCTCAGATTACT +
Preference number: 2 (lower is better)
Translates to: HVLTPNPGILKEAKNENIVVIKI*DASQIT
Trigger: AGTAATCTGAGATGCATCTCAGATCTTTATTACCAC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR TCA 90 bp CTTTTCAGAATTCTTCCATGTTGGTTGAAACATTGGGAGTTGCTGGATTCGAATTATTCTGGTGCGTTTTaGCATGTTTGGAGAGATGAT +
Preference number: 2 (lower is better)
Translates to: LFRILPCWLKHWELLDSNYSGAF*HVWRDD
Trigger: ATCATCTCTCCAAACATGTCAAAACGCACCAGAATA...ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACATGGAAGAATTCTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAATGGAGAAAGTAATTaGACTTCACTGATTGTCTGC +
Preference number: 2 (lower is better)
Translates to: HVLTPNPGILKEAKNENINGESN*TSLIVC
Trigger: GCAGACAATCAGTGAAGTCCAATTACTTTCTCCATT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCTCTTTTCACCTGTATaGGTTCTTCTATGTCTCTGG +
Preference number: 2 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVLFSPV*VLLCLW
Trigger: CCAGAGACATAGAAGAACCCATACAGGTGAAAAGAG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGTAATTGGACTTCACTaGTTGTCTGCATACACACTA +
Preference number: 2 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFVIGLH*LSAYTL
Trigger: TAGTGTGTATGCAGACAATCAGTGAAGTCCAATTAC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTCTACTGCACATCTGTaGCCTATTACTTATAACAGC +
Preference number: 2 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVSTAHL*PITYNS
Trigger: GCTGTTATAAGTAATAGGGCACAGATGTGCAGTAGA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGTGGTAATAAAGATCTaGGATGCATCTCAGATTACT +
Preference number: 2 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVVVIKI*DASQIT
Trigger: AGTAATCTGAGATGCATCTCAGATCTTTATTACCAC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAAAGGGAATGAACAGTaGAATGCCATTAAACAAGAC +
Preference number: 2 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVKGNEQ*NAIKQD
Trigger: GTCTTGTTTAATGGCATTTCACTGTTCATTCCCTTT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTCAATTTATGTGGGATaGCAACTTAGTGACATGCAT +
Preference number: 2 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVSIYVG*QLSDMH
Trigger: ATGCATGTCACTAAGTTGTCATCCCACATAAATTGA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAATGGAGAAAGTAATTaGACTTCACTGATTGTCTGC +
Preference number: 2 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFNGESN*TSLIVC
Trigger: GCAGACAATCAGTGAAGTCCAATTACTTTCTCCATT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGCACATCAATTTATGTaGGATGACAACTTAGTGACA +
Preference number: 2 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVAHQFM*DDNLVT
Trigger: TGTCACTAAGTTGTCATCCCACATAAATTGATGTGC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR CAA 90 bp TGCATTAGAACTGGTTCATGGAATAATGATGCAGAGTGTTCATACTaGGTATTAACAACAACAAAAAGTGTCACTCTGAGGAAACATGAT +
Preference number: 2 (lower is better)
Translates to: CIRTGSWNNDAECSY*VLTTTKSVTLRKHD
Trigger: ATCATGTTTCCTCAGAGTGACACTTTTTGTTGTTGTTAATACCAAGTATGAACACTCTGCATCATTATTCCATGAACCAGTTCTAATGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGACTTCACTGATTGTCTaGATACACACTACTATAATG +
Preference number: 2 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVTSLIV*IHTTIM
Trigger: CATTATAGTAGTGTGTATGCAGACAATCAGTGAAGT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTACTTCACTGATTGTCTaGATACACACTACTATAATG +
Preference number: 2 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFTSLIV*IHTTIM
Trigger: CATTATAGTAGTGTGTATGCAGACAATCAGTGAAGT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGACACACTTTTATTACTaGTCTCATGAGAGTGTGATA +
Preference number: 2 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVTHFYY*SHESVI
Trigger: TATCACACTCTCATGAGAGCAGTAATAAAAGTGTGT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGAAATAAAATGGGACTaGCCAATTTTTAGTAGAGGA +
Preference number: 2 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVEIKWD*PIFSRG
Trigger: TCCTCTACTAAAAATTGGCCAGTCCCATTTTATTTC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR TCA 72 bp GACAATTCTTGGGGAGCCAAGCACCTCTGTAACAGATaGGTCCAGTTCTCCCGAGGTAACAATGGCAAGAGC +
Preference number: 3 (lower is better)
Translates to: DNSWGAKHLCNR*VQFSRGNNGKS
Trigger: GCTCTTGCCATTGTTACCTCGGGAGAACTGGACTCATCTGTTACAGAGGTGCTTGGCTCCCCAAGAATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR CCA 72 bp GTCTGCTGGCCTTGCTGCAAATGCACTTGTGTGAGTTaGTCAGGACTAACAGCACCTATCGTGGCATTAGCA +
Preference number: 3 (lower is better)
Translates to: VCWPCCKCTCVS*SGLTAPIVALA
Trigger: TGCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACTCACACAAGTGCATTTGCAGCAAGGCCAGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR CAA 90 bp CAATTAGGACAGGAACAGGCAACTCTTCGAAGCCTCTTGCCAGGTTGTACCTCTTTGCTGCAAATGCACTaGTGTGAGTTGGTCAGGACT +
Preference number: 3 (lower is better)
Translates to: QLGQEQATLRSLLPGCTSLLQMH*CELVRT
Trigger: AGTCCTGACCAACTCACACAAGTGCATTTGCAGCAA...AGAGGTACAACCTGGCAAGAGGCTTCGAAGAGTTGCCTGTTCCTGTCCTAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAGACAGGAGAATCGCTaGAACCTGGGAGGCGGCGGT +
Preference number: 3 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVRQENR*NLGGGG
Trigger: ACCGCCGCCTCCCAGGTTCAAGCGATTCTCCTGTCT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR GCA 72 bp AACAGCACCTATCGTGGCATTAGCAATTCCTCCAACTaGTACAGTTACAGGAGCTATAGTAGCTTGCTGGAC +
Preference number: 3 (lower is better)
Translates to: NSTYRGISNSSN*YSYRSYSSLLD
Trigger: GTCCAGCAAGCTACTATAGCTCCTGTAACTGTAGCAGTTGGAGGAATTGCTAATGCCACGATAGGTGCTGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCCTGAGGTCAGGAGTTaGAAACCAGCCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVPEVRS*KPAWPT
Trigger: TGTTGGCCAGGCTGGTTTCAAACTCCTGACCTCAGG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATCAACACTTCACGTGTaGACCCCAAACCCTGGAATA +
Preference number: 3 (lower is better)
Translates to: HVLTPNPGILKEAKNENISTLHV*TPNPGI
Trigger: TATTCCAGGGTTTGGGGTCAACACGTGAAGTGTTGA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAGAAGTCTGCTGGCCTaGCTGCAAATGCACTTGTGT +
Preference number: 3 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVRSLLA*LQMHLC
Trigger: ACACAAGTGCATTTGCAGCAAGGCCAGCAGACTTCT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACTCCGTGTGAATCTTTaGCCACAAAACATCCAGTTG +
Preference number: 3 (lower is better)
Translates to: HVLTPNPGILKEAKNENILRVNL*PQNIQL
Trigger: CAACTGGATGTTTTGTGGCAAAAGATTCACACGGAG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTACTCTGTAATCCACTaGACCAGCCCATTTCCAGAT +
Preference number: 3 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVYSVIH*TSPFPD
Trigger: ATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAACTCTATGTTCCTCTaGTGTCTCCAAATGGAGAAA +
Preference number: 3 (lower is better)
Translates to: HVLTPNPGILKEAKNENINSMFL*CLQMEK
Trigger: TTTCTCCATTTGGAGACACAAGAGGAACATAGAGTT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTGCTGGATTCGAATCTaGAGAAATGGCTGCAACTGT +
Preference number: 3 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFCWIRI*RNGCNC
Trigger: ACAGTTGCAGCCATTTCTCAAGATTCGAATCCAGCA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTATTCTTCCATGTTGGTaGAAACATTGGGAGTTGCTG +
Preference number: 3 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFILPCW*KHWELL
Trigger: CAGCAACTCCCAATGTTTCAACCAACATGGAAGAAT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAACTCTATGTTCCTCTaGTGTCTCCAAATGGAGAAA +
Preference number: 3 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFNSMFL*CLQMEK
Trigger: TTTCTCCATTTGGAGACACAAGAGGAACATAGAGTT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR-3UTR CAA 90 bp CTTTTCAGAATTCTTCCATGTTGGTTGAAACATTGGGAGTTGCTGGATTCGAATCCACAAAACATCCAGTaGCATATAAAAGGTCTTTCT +
Preference number: 3 (lower is better)
Translates to: LFRILPCWLKHWELLDSNPQNIQ*HIKGLS
Trigger: AGAAAGACCTTTTATATGCAACTGGATGTTTTGTGG...ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACATGGAAGAATTCTGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR CCA 72 bp TATGTTCCTCTTGTGTCTCCAAATGGAGAAAGTAATTaGACTTCACTGATTGTCTGCATACACACTACTATA +
Preference number: 3 (lower is better)
Translates to: YVPLVSPNGESN*TSLIVCIHTTI
Trigger: TATAGTAGTGTGTATGCAGACAATCAGTGAAGTCCAATTACTTTCTCCATTTGGAGACACAAGAGGAACATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
3UTR TCA 72 bp CATACACACTACTATAATGTAGTGGTAATAAAGATCTaGGATGCATCTCAGATTACTGTTTTGGAACTTACC +
Preference number: 3 (lower is better)
Translates to: HTHYYNVVVIKI*DASQITVLELT
Trigger: GGTAAGTTCCAAAACAGTAATCTGAGATGCATCTCAGATCTTTATTACCACTACATTATAGTAGTGTGTATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp CAATTAGGACAGGAACAGGCAACTCTTCGAAGCCTCTTGCCAGGTTGTACCTCTCTCTTTTTCCGCGAATaGCCGCCGCTGGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QLGQEQATLRSLLPGCTSLFFRE*PPLGCG
Trigger: GCCACAGCCCAGCGGCGGCCATTCGCGGAAAAAGAG...AGAGGTACAACCTGGCAAGAGGCTTCGAAGAGTTGCCTGTTCCTGTCCTAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR CAA 72 bp ACAGGAACAGGCAACTCTTCGAAGCCTCTTGCCAGGTaGTACCTCTTGATCAGAAGTCTGCTGGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: TGTGNSSKPLAR*YLLIRSLLALL
Trigger: CAGCAAGGCCAGCAGACTTCTGATCAAGAGGTACAACCTGGCAAGAGGCTTCGAAGAGTTGCCTGTTCCTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR TCA 90 bp CAATTAGGACAGGAACAGGCAACTCTTCGAAGCCTCTTGCCAGGTTGTACCTCTTCTTGTCCTTGCTGCTaGCCTGGGAGCCTGAGGTTT +
Preference number: 4 (lower is better)
Translates to: QLGQEQATLRSLLPGCTSSCPCC*PGSLRF
Trigger: AAACCTCAGGCTCCCAGGTCAGCAGCAAGGACAAGA...AGAGGTACAACCTGGCAAGAGGCTTCGAAGAGTTGCCTGTTCCTGTCCTAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATGTAGCCATCGCCGCTaGCGCTGCCGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENICSHRR*RCRLLL
Trigger: GAGGAGGAGGCGGCAGCGGCAGCGGCGATGGCTACA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGCAGGCTGGCCAACCTaGCCAGTCCCTCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIAGWPT*PVPPPA
Trigger: TGCCGGAGGAGGGACTGGGCAGGTTGGCCAGCCTGC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGCCAGAGGAGAGGGCTaGGAGTCCTGGGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIARGEG*ESWEPE
Trigger: CTCAGGCTCCCAGGACTCTCAGCCCTCTCCTCTGGC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp AGTTGGTCAGGACTAACAGCACCTATCGTGGCATTAGCAATTCCTCCAACTGCTAGCTGGCACAGGCTCTaGCTCTTTTTCCGCGAATGG +
Preference number: 4 (lower is better)
Translates to: SWSGLTAPIVALAIPPTASWHRL*LFFREW
Trigger: CCATTCGCGGAAAAAGAGGCAGAGCCTGTGCCAGCT...AGCAGTTGGAGGAATTGCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448246.1
3UTR CAA 72 bp AGTCTGCTGGCCTTGCTGCAAATGCACTTGTGTGAGTaGGTCAGGACTAACAGCACCTATCGTGGCATTAGC +
Preference number: 4 (lower is better)
Translates to: SLLALLQMHLCE*VRTNSTYRGIS
Trigger: GCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACTCACACAAGTGCATTTGCAGCAAGGCCAGCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTGTAGCCATCGCCGCTaGCGCTGCCGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFCSHRR*RCRLLL
Trigger: GAGGAGGAGGCGGCAGCGGCAGCGGCGATGGCTACA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGCAGGCTGGCCAACCTaGCCAGTCCCTCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFAGWPT*PVPPPA
Trigger: TGCCGGAGGAGGGACTGGGCAGGTTGGCCAGCCTGC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp CAATTAGGACAGGAACAGGCAACTCTTCGAAGCCTCTTGCCAGGTTGTACCTCTGGTCTTTCTCCAGTATaGCAGCGAAGATGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: QLGQEQATLRSLLPGCTSGLSPV*QRRCAR
Trigger: ACGAGCACATCTTCGCTGGCATACTGGAGAAAGACC...AGAGGTACAACCTGGCAAGAGGCTTCGAAGAGTTGCCTGTTCCTGTCCTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGCAGTAGCAGCAGGCTaGCCAACCTGCCCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIAVAAG*PTCPVP
Trigger: AGGGACTGGGCAGGTTGGCCAGCCTGCTGCTACTGC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGCCGCCGCTGGGCTGTaGCGTAGCAGCTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVAAAGL*RSSSSL
Trigger: GAGAGAGGAGCTGCTACGCCACAGCCCAGCGGCGGC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGCCAGAGGAGAGGGCTaGGAGTCCTGGGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVARGEG*ESWEPE
Trigger: CTCAGGCTCCCAGGACTCTCAGCCCTCTCCTCTGGC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp AGTTGGTCAGGACTAACAGCACCTATCGTGGCATTAGCAATTCCTCCAACTGCTGTCTGCTGGCCTTGCTaGAAATGCACTTGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SWSGLTAPIVALAIPPTAVCWPC*KCTCVS
Trigger: ACTCACACAAGTGCATTTGCAGCAAGGCCAGCAGAC...AGCAGTTGGAGGAATTGCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACTCAGACGGAGACACTaGGATAGAGGTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENILRRRH*DRGGWG
Trigger: CCCCCACCCACCTCTATCCCAGTGTCTCCGTCTGAG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000448246.1
3UTR CAA 72 bp TTGATCAGAAGTCTGCTGGCCTTGCTGCAAATGCACTaGTGTGAGTTGGTCAGGACTAACAGCACCTATCGT +
Preference number: 4 (lower is better)
Translates to: LIRSLLALLQMH*CELVRTNSTYR
Trigger: ACGATAGGTGCTGTTAGTCCTGACCAACTCACACAAGTGCATTTGCAGCAAGGCCAGCAGACTTCTGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR GCA 90 bp CTTTTCAGAATTCTTCCATGTTGGTTGAAACATTGGGAGTTGCTGGATTCGAATCTGGGAGGCGGCGGTTaGAGTAAGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: LFRILPCWLKHWELLDSNLGGGG*SKLRSC
Trigger: GCACGATCTCAGCTTACTGCAACCGCCGCCTCCCAG...ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACATGGAAGAATTCTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGCAGTAGCAGCAGGCTaGCCAACCTGCCCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVAVAAG*PTCPVP
Trigger: AGGGACTGGGCAGGTTGGCCAGCCTGCTGCTACTGC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGCCACAGGAGCAATCTaGGCAAGAGTTGTGCCACCA +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIATGAI*ARVVPP
Trigger: TGGTGGCACAACTCTTGCTCAGATTGCTCCTGTGGC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp AGTTGGTCAGGACTAACAGCACCTATCGTGGCATTAGCAATTCCTCCAACTGCTGCTCATCACTCCGTGTaGATCTTTTGCCACAAAACA +
Preference number: 4 (lower is better)
Translates to: SWSGLTAPIVALAIPPTAAHHSV*IFCHKT
Trigger: TGTTTTGTGGCAAAAGATTCACACGGAGTGATGAGC...AGCAGTTGGAGGAATTGCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR TCA 90 bp AGTTGGTCAGGACTAACAGCACCTATCGTGGCATTAGCAATTCCTCCAACTGCTTTCTTCCATGTTGGTTaGAACATTGGGAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SWSGLTAPIVALAIPPTAFFHVG*NIGSCW
Trigger: CCAGCAACTCCCAATGTTTCAACCAACATGGAAGAA...AGCAGTTGGAGGAATTGCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGGTGGGCAGATCACCTaGGGTCAGGAGTTTGAAACC +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIGGQIT*GQEFET
Trigger: GGTTTCAAACTCCTGACCTCAGGTGATCTGCCCACC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAGCTGGCACAGGCTCTaGCTCTTTTTCCGCGAATGG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENISWHRL*LFFREW
Trigger: CCATTCGCGGAAAAAGAGGCAGAGCCTGTGCCAGCT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000448246.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACTGCACTTGAACACCTaGAGCACCCAGGTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENILHLNT*STQVGN
Trigger: GTTGCCAACCTGGGTGCTGCAGGTGTTCAAGTGCAG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACTGAGATCGTGCCATTaGACTCCAGCCTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENILRSCH*TPAWAR
Trigger: TCTTGCCCAGGCTGGAGTGCAATGGCACGATCTCAG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCTGGGAGGCGGCGGTTaGAGTAAGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFLGGGG*SKLRSC
Trigger: GCACGATCTCAGCTTACTGCAACCGCCGCCTCCCAG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCTCAGACGGAGACACTaGGATAGAGGTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFLRRRH*DRGGWG
Trigger: CCCCCACCCACCTCTATCCCAGTGTCTCCGTCTGAG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000448246.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAAGGCTGCTGCTGGATaGTCTGAATCGTCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIKAAAG*SESSAL
Trigger: CAGGGCAGACGATTCAGACCATCCAGCAGCAGCCTT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACTGCAGCACCCAGGTTaGCAACGCTCACTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENILQHPG*QRSLSE
Trigger: TTCAGACAGTGAGCGTTGCCAACCTGGGTGCTGCAG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACTGAATCGTCTGCCCTaGCTGGAGTTGAAACGACTG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENILNRLP*LELKRL
Trigger: CAGTCGTTTCAACTCCAGTCAGGGCAGACGATTCAG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTGCTGCTGGATGGTCTaGATCGTCTGCCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFCCWMV*IVCPDW
Trigger: CCAGTCAGGGCAGACGATTCAGACCATCCAGCAGCA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTGCTGCTGGATGGTCTaGATCGTCTGCCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVCCWMV*IVCPDW
Trigger: CCAGTCAGGGCAGACGATTCAGACCATCCAGCAGCA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGCAACGCTCACTGTCTaGAGGTTAGGCACTGATGCA +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIATLTV*RLGTDA
Trigger: TGCATCAGTGCCTAACCTTCAGACAGTGAGCGTTGC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACACCTCTGTAACAGATaGGTCCAGTTCTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIHLCNR*VQFSRG
Trigger: ACCTCGGGAGAACTGGACTCATCTGTTACAGAGGTG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR TCA 90 bp CTTTTCAGAATTCTTCCATGTTGGTTGAAACATTGGGAGTTGCTGGATTCGAATGGTGGGCAGATCACCTaGGGTCAGGAGTTTGAAACC +
Preference number: 4 (lower is better)
Translates to: LFRILPCWLKHWELLDSNGGQIT*GQEFET
Trigger: GGTTTCAAACTCCTGACCTCAGGTGATCTGCCCACC...ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACATGGAAGAATTCTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CCA 90 bp CAATTAGGACAGGAACAGGCAACTCTTCGAAGCCTCTTGCCAGGTTGTACCTCTAAAGTAGACTCAGAATaGTATGCAGAACAGACTGTC +
Preference number: 4 (lower is better)
Translates to: QLGQEQATLRSLLPGCTSKVDSE*YAEQTV
Trigger: GACAGTCTGTTCTGCATACCATTCTGAGTCTACTTT...AGAGGTACAACCTGGCAAGAGGCTTCGAAGAGTTGCCTGTTCCTGTCCTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGCTTGTCAAAGACGTTaGAGCAGTGGTTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIACQRR*SSGCAG
Trigger: ACCTGCACAACCACTGCTTCAACGTCTTTGACAAGC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGCCACAGGAGCAATCTaGGCAAGAGTTGTGCCACCA +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVATGAI*ARVVPP
Trigger: TGGTGGCACAACTCTTGCTCAGATTGCTCCTGTGGC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACAACACTTCACGTGTTaGCCCCAAACCCTGGAATAC +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIQHFTC*PQTLEY
Trigger: GTATTCCAGGGTTTGGGGTCAACACGTGAAGTGTTG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGGTGGGCAGATCACCTaGGGTCAGGAGTTTGAAACC +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVGGQIT*GQEFET
Trigger: GGTTTCAAACTCCTGACCTCAGGTGATCTGCCCACC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGTGGAGGCAACAAGTTaGCAAGCGTTTCCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIVEATS*QAFPAS
Trigger: ACTTGCTGGAAACGCTTGGCAACTTGTTGCCTCCAC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCTGCACTTGAACACCTaGAGCACCCAGGTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVLHLNT*STQVGN
Trigger: GTTGCCAACCTGGGTGCTGCAGGTGTTCAAGTGCAG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGAAGTCTGCTGGCCTTaGTGCAAATGCACTTGTGTG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIEVCWP*CKCTCV
Trigger: CACACAAGTGCATTTGCAGCAAGGCCAGCAGACTTC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGGTCTTTCTCCAGTATaGCAGCGAAGATGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIGLSPV*QRRCAR
Trigger: ACGAGCACATCTTCGCTGGCATACTGGAGAAAGACC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCTGAGATCGTGCCATTaGACTCCAGCCTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVLRSCH*TPAWAR
Trigger: TCTTGCCCAGGCTGGAGTGCAATGGCACGATCTCAG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCTGAGATCGTGCCATTaGACTCCAGCCTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFLRSCH*TPAWAR
Trigger: TCTTGCCCAGGCTGGAGTGCAATGGCACGATCTCAG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAAGGCTGCTGCTGGATaGTCTGAATCGTCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFKAAAG*SESSAL
Trigger: CAGGGCAGACGATTCAGACCATCCAGCAGCAGCCTT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCTGCAGCACCCAGGTTaGCAACGCTCACTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFLQHPG*QRSLSE
Trigger: TTCAGACAGTGAGCGTTGCCAACCTGGGTGCTGCAG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp AGTTGGTCAGGACTAACAGCACCTATCGTGGCATTAGCAATTCCTCCAACTGCTTGTTGGTTGAAACATTaGGAGTTGCTGGATTCGAAT +
Preference number: 4 (lower is better)
Translates to: SWSGLTAPIVALAIPPTACWLKH*ELLDSN
Trigger: ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACA...AGCAGTTGGAGGAATTGCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATGTTGTCCAGTTGCTTaGTTTTCACCAGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENICCPVA*FSPGVP
Trigger: AGGGACTCCTGGTGAAAATCAAGCAACTGGACAACA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAACGTTATTCTCTTTTaGAGCAGGAGGAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENINVILF*SRRSGG
Trigger: GCCTCCACTCCTCCTGCTTCAAAAGAGAATAACGTT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGTAGCAGCAGGTGTTTaGGATTCTTCAATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIVAAGV*DSSMVR
Trigger: ACGCACCATTGAAGAATCTCAAACACCTGCTGCTAC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCTGAATCGTCTGCCCTaGCTGGAGTTGAAACGACTG +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVLNRLP*LELKRL
Trigger: CAGTCGTTTCAACTCCAGTCAGGGCAGACGATTCAG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAGTTGTGCCACCACTTaGAGACACTGGGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVSCATT*RHWGDG
Trigger: ACCATCACCCCAGTGTCTTCAAGTGGTGGCACAACT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAGTTGTGCCACCACTTaGAGACACTGGGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFSCATT*RHWGDG
Trigger: ACCATCACCCCAGTGTCTTCAAGTGGTGGCACAACT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGCAACGCTCACTGTCTaGAGGTTAGGCACTGATGCA +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFATLTV*RLGTDA
Trigger: TGCATCAGTGCCTAACCTTCAGACAGTGAGCGTTGC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCACCTCTGTAACAGATaGGTCCAGTTCTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVHLCNR*VQFSRG
Trigger: ACCTCGGGAGAACTGGACTCATCTGTTACAGAGGTG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCACCTCTGTAACAGATaGGTCCAGTTCTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFHLCNR*VQFSRG
Trigger: ACCTCGGGAGAACTGGACTCATCTGTTACAGAGGTG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGCGTTTCCAGCAAGTTaGGTTGTTACCAGTTCTAGC +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIAFPAS*VVTSSS
Trigger: GCTAGAACTGGTAACAACGCAACTTGCTGGAAACGC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATCTGAGCAAGAGTTGTaGCACCACTTGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENISEQEL*HHLKTL
Trigger: CAGTGTCTTCAAGTGGTGGCACAACTCTTGCTCAGA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACTCTTCGAAGCCTCTTaGCAGGTTGTACCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENILFEAS*QVVPLD
Trigger: ATCAAGAGGTACAACCTGGCAAGAGGCTTCGAAGAG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp AGTTGGTCAGGACTAACAGCACCTATCGTGGCATTAGCAATTCCTCCAACTGCTATGAACACTACCAAATaGTCCTCTGTACCAAACAAA +
Preference number: 4 (lower is better)
Translates to: SWSGLTAPIVALAIPPTAMNTTK*SSVPNK
Trigger: TTTGTTTGGTACAGAGGAGCATTTGGTAGTGTTCAT...AGCAGTTGGAGGAATTGCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATGCACTTGTGTGAGTTaGTCAGGACTAACAGCACCT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENICTCVS*SGLTAP
Trigger: AGGTGCTGTTAGTCCTGACCAACTCACACAAGTGCA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGTTCTTCTATGTCTCTaGAGCTCATCACTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIVLLCL*SSSLRV
Trigger: CACACGGAGTGATGAGCTCCAGAGACATAGAAGAAC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAACTGTGACAATTCTTaGGGAGCCAAGCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENINCDNS*GAKHLC
Trigger: ACAGAGGTGCTTGGCTCCCCAAGAATTGTCACAGTT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp AGTTGGTCAGGACTAACAGCACCTATCGTGGCATTAGCAATTCCTCCAACTGCTAGAATTCTTCCATGTTaGTTGAAACATTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SWSGLTAPIVALAIPPTARILPC*LKHWEL
Trigger: CAACTCCCAATGTTTCAACCAACATGGAAGAATTCT...AGCAGTTGGAGGAATTGCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAAAATTAGCCAGGCATaGTGGCAGGCGCCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIKISQA*WQAPVN
Trigger: ATTAACAGGCGCCTGCCACCATGCCTGGCTAATTTT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGGTGTGGAAACTAATTaGTTCCCATTGGAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIGVETN*FPLEVP
Trigger: TGGGACTTCCAATGGGAATCAATTAGTTTCCACACC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGCTTGTCAAAGACGTTaGAGCAGTGGTTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVACQRR*SSGCAG
Trigger: ACCTGCACAACCACTGCTTCAACGTCTTTGACAAGC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTTCAGAACTACTGGCTaGTGTGCTTGCATACTGGCC +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVFRTTG*CACILA
Trigger: GGCCAGTATGCAAGCACATCAGCCAGTAGTTCTGAA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCTGAAGGTTAGGCACTaGTGCAAGCTGGGCAGTATT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVLKVRH*CKLGSI
Trigger: AATACTGCCCAGCTTGCATCAGTGCCTAACCTTCAG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp CTTTTCAGAATTCTTCCATGTTGGTTGAAACATTGGGAGTTGCTGGATTCGAATGCTGGATTCGAATCTTaGGAAATGGCTGCAACTGTG +
Preference number: 4 (lower is better)
Translates to: LFRILPCWLKHWELLDSNAGFES*EMAATV
Trigger: CACAGTTGCAGCCATTTCTCAAGATTCGAATCCAGC...ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACATGGAAGAATTCTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATTCTTCCATGTTGGTTaGAACATTGGGAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIFFHVG*NIGSCW
Trigger: CCAGCAACTCCCAATGTTTCAACCAACATGGAAGAA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGTGGAGGCAACAAGTTaGCAAGCGTTTCCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFVEATS*QAFPAS
Trigger: ACTTGCTGGAAACGCTTGGCAACTTGTTGCCTCCAC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAACTACTGGCTGATGTaGTTGCATACTGGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENINYWLM*LHTGQY
Trigger: ATACTGGCCAGTATGCAAGCACATCAGCCAGTAGTT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGAGATTCTTCAATGGTaGGTTCAGAACTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIEILQW*VQNYWL
Trigger: CAGCCAGTAGTTCTGAACGCACCATTGAAGAATCTC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATCCTTGCTGCTGACCTaGAACACTAGTGATTGTAAC +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENISLLLT*NTSDCN
Trigger: GTTACAATCACTAGTGTTGCAGGTCAGCAGCAAGGA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp CTTTTCAGAATTCTTCCATGTTGGTTGAAACATTGGGAGTTGCTGGATTCGAATTGGCCTTGCTGCAAATaGACTTGTGTGAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LFRILPCWLKHWELLDSNWPCCK*TCVSWS
Trigger: TGACCAACTCACACAAGTGCATTTGCAGCAAGGCCA...ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACATGGAAGAATTCTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGTCTGCTGGCCTTGCTaGAAATGCACTTGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVVCWPC*KCTCVS
Trigger: ACTCACACAAGTGCATTTGCAGCAAGGCCAGCAGAC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp AGTTGGTCAGGACTAACAGCACCTATCGTGGCATTAGCAATTCCTCCAACTGCTTTTAATACCCTATGCTaGACATCAATTTATGTGGGA +
Preference number: 4 (lower is better)
Translates to: SWSGLTAPIVALAIPPTAFNTLC*TSIYVG
Trigger: TCCCACATAAATTGATGTGCAGCATAGGGTATTAAA...AGCAGTTGGAGGAATTGCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGGAGGAGGGAGATTCTaGCATAGTACTGGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFGGGRF*HSTGRS
Trigger: ACTTCTGCCAGTACTATGCCAGAATCTCCCTCCTCC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGGAGGAGGGAGATTCTaGCATAGTACTGGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVGGGRF*HSTGRS
Trigger: ACTTCTGCCAGTACTATGCCAGAATCTCCCTCCTCC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGATGTGCTTGCATACTaGCCAGTATCTGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVDVLAY*PVSAEL
Trigger: GAGCTCAGCAGATACTGGCCAGTATGCAAGCACATC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAACGCTACAAAGGGCTaGCCTAAAGTGTACATAGTG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENINATKG*PKVYIV
Trigger: CACTATGTACACTTTAGGCCAGCCCTTTGTAGCGTT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTGTTGTCCAGTTGCTTaGTTTTCACCAGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFCCPVA*FSPGVP
Trigger: AGGGACTCCTGGTGAAAATCAAGCAACTGGACAACA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGTAGCAGCAGGTGTTTaGGATTCTTCAATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVVAAGV*DSSMVR
Trigger: ACGCACCATTGAAGAATCTCAAACACCTGCTGCTAC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATTGAAGACACTGGGGTaGTGGTTAATTGTTGGGATA +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENILKTLG*WLIVGI
Trigger: TATCCCAACAATTAACCATCACCCCAGTGTCTTCAA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGCTGGATTCGAATCTTaGGAAATGGCTGCAACTGTG +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFAGFES*EMAATV
Trigger: CACAGTTGCAGCCATTTCTCAAGATTCGAATCCAGC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGCTGGATTCGAATCTTaGGAAATGGCTGCAACTGTG +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVAGFES*EMAATV
Trigger: CACAGTTGCAGCCATTTCTCAAGATTCGAATCCAGC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACGGAACTGTCTGATTTaGCAGGTTTTGAGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIRNCLI*QVLSKN
Trigger: ATTCTTGCTCAAAACCTGGCAAATCAGACAGTTCCG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTCTGAGCAAGAGTTGTaGCACCACTTGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFSEQEL*HHLKTL
Trigger: CAGTGTCTTCAAGTGGTGGCACAACTCTTGCTCAGA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGGAGCTATAGTAGCTTaGTGGACTTTTACTCCATCT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIGAIVA*WTFTPS
Trigger: AGATGGAGTAAAAGTCCAGCAAGCTACTATAGCTCC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCTCTTCGAAGCCTCTTaGCAGGTTGTACCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFLFEAS*QVVPLD
Trigger: ATCAAGAGGTACAACCTGGCAAGAGGCTTCGAAGAG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTTCCTGGTTCATTACTaGCTCTTCCTTCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVFLVHY*LFLLLP
Trigger: GGGAAGGAGAAGGAAGAGGCAGTAATGAACCAGGAA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTTCCTGGTTCATTACTaGCTCTTCCTTCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFFLVHY*LFLLLP
Trigger: GGGAAGGAGAAGGAAGAGGCAGTAATGAACCAGGAA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCAGCCCCAGAGGCTTTaGTGGCAGAATAATTGTCTA +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFQPQRL*WQNNCL
Trigger: TAGACAATTATTCTGCCAGCAAAGCCTCTGGGGCTG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222584.8
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACTAATTGATTCCCATTaGAAGTCCCACTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENILIDSH*KSHYQQ
Trigger: CTGCTGATAGTGGGACTTCCAATGGGAATCAATTAG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATTGAAACGACTGTGGTaGAATAGCCTGAATGATCTG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENILKRLW*NSLNDL
Trigger: CAGATCATTCAGGCTATTCCACCACAGTCGTTTCAA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGAGTTGAAACGACTGTaGTGGAATAGCCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIELKRL*WNSLND
Trigger: ATCATTCAGGCTATTCCACCACAGTCGTTTCAACTC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGGCACTGATGCAAGCTaGGCAGTATTCAAAGTTATT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIGTDAS*AVFKVI
Trigger: AATAACTTTGAATACTGCCCAGCTTGCATCAGTGCC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTGCACTTGTGTGAGTTaGTCAGGACTAACAGCACCT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVCTCVS*SGLTAP
Trigger: AGGTGCTGTTAGTCCTGACCAACTCACACAAGTGCA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGTTCTTCTATGTCTCTaGAGCTCATCACTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFVLLCL*SSSLRV
Trigger: CACACGGAGTGATGAGCTCCAGAGACATAGAAGAAC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACTCTTTTCACCTGTATaGGTTCTTCTATGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENILFSPV*VLLCLW
Trigger: CCAGAGACATAGAAGAACCCATACAGGTGAAAAGAG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAACTGTGACAATTCTTaGGGAGCCAAGCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVNCDNS*GAKHLC
Trigger: ACAGAGGTGCTTGGCTCCCCAAGAATTGTCACAGTT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAAAATTAGCCAGGCATaGTGGCAGGCGCCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFKISQA*WQAPVN
Trigger: ATTAACAGGCGCCTGCCACCATGCCTGGCTAATTTT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGCTGTGAGTATAGCTTaGTTATTACCTGCAGAAATG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIAVSIA*LLPAEM
Trigger: CATTTCTGCAGGTAATAATCAAGCTATACTCACAGC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGTACAGTTTGCCAACTaGTTTGCCCTGAAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFVQFAN*FALKVL
Trigger: TAACACCTTCAGGGCAAATCAGTTGGCAAACTGTAC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGCTCATCACTCCGTGTaGATCTTTTGCCACAAAACA +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFAHHSV*IFCHKT
Trigger: TGTTTTGTGGCAAAAGATTCACACGGAGTGATGAGC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGTAATTGGACTTCACTaGTTGTCTGCATACACACTA +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIVIGLH*LSAYTL
Trigger: TAGTGTGTATGCAGACAATCAGTGAAGTCCAATTAC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATCACTAATGTGTCACTaGTTGTCAAAGACGTTGAAG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENISLMCH*LSKTLK
Trigger: CTTCAACGTCTTTGACAAGCAGTGACACATTAGTGA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAACTACTGGCTGATGTaGTTGCATACTGGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFNYWLM*LHTGQY
Trigger: ATACTGGCCAGTATGCAAGCACATCAGCCAGTAGTT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTGTTGGATCTGGATCTaGTGTAAGATAGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVCWIWI*CKIGWP
Trigger: AGGCCAACCTATCTTACAGCAGATCCAGATCCAACA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACTGAGTCGGATTTACTaGTTGAAGTTGAACATTCTG +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENILSRIY*LKLNIL
Trigger: CAGAATGTTCAACTTCAAGCAGTAAATCCGACTCAG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTCCTTGCTGCTGACCTaGAACACTAGTGATTGTAAC +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVSLLLT*NTSDCN
Trigger: GTTACAATCACTAGTGTTGCAGGTCAGCAGCAAGGA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp CTTTTCAGAATTCTTCCATGTTGGTTGAAACATTGGGAGTTGCTGGATTCGAATGGAGCTATAGTAGCTTaGTGGACTTTTACTCCATCT +
Preference number: 4 (lower is better)
Translates to: LFRILPCWLKHWELLDSNGAIVA*WTFTPS
Trigger: AGATGGAGTAAAAGTCCAGCAAGCTACTATAGCTCC...ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACATGGAAGAATTCTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR GCA 90 bp CTTTTCAGAATTCTTCCATGTTGGTTGAAACATTGGGAGTTGCTGGATTCGAATAGCAATTCCTCCAACTaGTACAGTTACAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: LFRILPCWLKHWELLDSNSNSSN*YSYRSY
Trigger: ATAGCTCCTGTAACTGTAGCAGTTGGAGGAATTGCT...ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACATGGAAGAATTCTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACACTGTCTGAAGTTGTaGAATTACTTGGTACTGTAC +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIHCLKL*NYLVLY
Trigger: GTACAGTACCAAGTAATTCCACAACTTCAGACAGTG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTGCGTTCAGAACTACTaGCTGATGTGCTTGCATACT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVCVQNY*LMCLHT
Trigger: AGTATGCAAGCACATCAGCCAGTAGTTCTGAACGCA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTGCTGTAAGATAGGTTaGCCTACAATTTGCACCTGC +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFCCKIG*PTICTC
Trigger: GCAGGTGCAAATTGTAGGCCAACCTATCTTACAGCA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGCTATAGTAGCTTGCTaGACTTTTACTCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIAIVAC*TFTPSC
Trigger: ACAAGATGGAGTAAAAGTCCAGCAAGCTACTATAGC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAAAGTAGACTCAGAATaGTATGCAGAACAGACTGTC +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIKVDSE*YAEQTV
Trigger: GACAGTCTGTTCTGCATACCATTCTGAGTCTACTTT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGGTGGAAGAATTACCTaGTTTAGTTTTTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIGGRIT*FSFCRR
Trigger: TCTCCTACAAAAACTAAATCAGGTAATTCTTCCACC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCTGCTGAAGAGAATTTaGTTGATCCTGTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFLLKRI*LILCIL
Trigger: CAGAATGCACAGGATCAATCAAATTCTCTTCAGCAG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCTGCTGAAGAGAATTTaGTTGATCCTGTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVLLKRI*LILCIL
Trigger: CAGAATGCACAGGATCAATCAAATTCTCTTCAGCAG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGATAACCCAGCATTCTaGACTTGCAAATTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIDNPAF*TCKFER
Trigger: TCTTTCAAATTTGCAAGTTCAGAATGCTGGGTTATC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTTGAAGACACTGGGGTaGTGGTTAATTGTTGGGATA +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVLKTLG*WLIVGI
Trigger: TATCCCAACAATTAACCATCACCCCAGTGTCTTCAA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGACATGTTTGGAGAGATaGTCACTCCGCATAAACCTT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVTCLER*SLRINL
Trigger: AAGGTTTATGCGGAGTGATCATCTCTCCAAACATGT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCGGAACTGTCTGATTTaGCAGGTTTTGAGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFRNCLI*QVLSKN
Trigger: ATTCTTGCTCAAAACCTGGCAAATCAGACAGTTCCG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGGAAGAGTCTGTAACTaGAGTGGTATTGAAACACCA +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFGRVCN*SGIETP
Trigger: TGGTGTTTCAATACCACTGCAGTTACAGACTCTTCC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGGAAGAGTCTGTAACTaGAGTGGTATTGAAACACCA +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVGRVCN*SGIETP
Trigger: TGGTGTTTCAATACCACTGCAGTTACAGACTCTTCC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGGAGCTATAGTAGCTTaGTGGACTTTTACTCCATCT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFGAIVA*WTFTPS
Trigger: AGATGGAGTAAAAGTCCAGCAAGCTACTATAGCTCC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAGCAATTCCTCCAACTaGTACAGTTACAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFSNSSN*YSYRSY
Trigger: ATAGCTCCTGTAACTGTAGCAGTTGGAGGAATTGCT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp CTTTTCAGAATTCTTCCATGTTGGTTGAAACATTGGGAGTTGCTGGATTCGAATTTTATTGTTATTCTCTaGCTCAGAGGTTTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LFRILPCWLKHWELLDSNFIVIL*LRGFPS
Trigger: GGAGGGAAAACCTCTGAGCCAGAGAATAACAATAAA...ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACATGGAAGAATTCTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAGACGAACTAGAGGCTaGTTGAGAAACGTTATTCTC +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFRRTRG*LRNVIL
Trigger: GAGAATAACGTTTCTCAACCAGCCTCTAGTTCGTCT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCTAATTGATTCCCATTaGAAGTCCCACTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFLIDSH*KSHYQQ
Trigger: CTGCTGATAGTGGGACTTCCAATGGGAATCAATTAG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTTGAAACGACTGTGGTaGAATAGCCTGAATGATCTG +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVLKRLW*NSLNDL
Trigger: CAGATCATTCAGGCTATTCCACCACAGTCGTTTCAA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGAGTTGAAACGACTGTaGTGGAATAGCCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVELKRL*WNSLND
Trigger: ATCATTCAGGCTATTCCACCACAGTCGTTTCAACTC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGGCACTGATGCAAGCTaGGCAGTATTCAAAGTTATT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVGTDAS*AVFKVI
Trigger: AATAACTTTGAATACTGCCCAGCTTGCATCAGTGCC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCTCTTTTCACCTGTATaGGTTCTTCTATGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFLFSPV*VLLCLW
Trigger: CCAGAGACATAGAAGAACCCATACAGGTGAAAAGAG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCCCCAGAGGCTTTGCTaGCAGAATAATTGTCTAAAT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVPQRLC*QNNCLN
Trigger: ATTTAGACAATTATTCTGCCAGCAAAGCCTCTGGGG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222584.8
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGAACTAGAGGCTGGTTaGGAAACGTTATTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVELEAG*ETLFSF
Trigger: AAAAGAGAATAACGTTTCTCAACCAGCCTCTAGTTC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGATTTTGTACTTGTATaGCTTGAAATTGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVDFVLV*LEIDQG
Trigger: CCCCTGGTCAATTTCAAGTCATACAAGTACAAAATC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGATTTTGTACTTGTATaGCTTGAAATTGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFDFVLV*LEIDQG
Trigger: CCCCTGGTCAATTTCAAGTCATACAAGTACAAAATC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGCTGTGAGTATAGCTTaGTTATTACCTGCAGAAATG +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVAVSIA*LLPAEM
Trigger: CATTTCTGCAGGTAATAATCAAGCTATACTCACAGC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTATTCTGGTGCGTTTTaGCATGTTTGGAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVYSGAF*HVWRDD
Trigger: ATCATCTCTCCAAACATGTCAAAACGCACCAGAATA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTATTCTGGTGCGTTTTaGCATGTTTGGAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFYSGAF*HVWRDD
Trigger: ATCATCTCTCCAAACATGTCAAAACGCACCAGAATA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGTAATTGGACTTCACTaGTTGTCTGCATACACACTA +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVVIGLH*LSAYTL
Trigger: TAGTGTGTATGCAGACAATCAGTGAAGTCCAATTAC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAGTTTTTGTAGGAGATaGACTCCCGTTATTACTGCT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVSFCRR*TPVITA
Trigger: AGCAGTAATAACGGGAGTGCATCTCCTACAAAAACT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTCACTAATGTGTCACTaGTTGTCAAAGACGTTGAAG +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVSLMCH*LSKTLK
Trigger: CTTCAACGTCTTTGACAAGCAGTGACACATTAGTGA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTCTACTGCACATCTGTaGCCTATTACTTATAACAGC +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFSTAHL*PITYNS
Trigger: GCTGTTATAAGTAATAGGGCACAGATGTGCAGTAGA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTTTATTGTTATTCTCTaGCTCAGAGGTTTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFFIVIL*LRGFPS
Trigger: GGAGGGAAAACCTCTGAGCCAGAGAATAACAATAAA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
38% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCACTGTCTGAAGTTGTaGAATTACTTGGTACTGTAC +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVHCLKL*NYLVLY
Trigger: GTACAGTACCAAGTAATTCCACAACTTCAGACAGTG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTTTGAGATTCTTCAATaGTGCGTTCAGAACTACTGG +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVFEILQ*CVQNYW
Trigger: CCAGTAGTTCTGAACGCACCATTGAAGAATCTCAAA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGCTATAGTAGCTTGCTaGACTTTTACTCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFAIVAC*TFTPSC
Trigger: ACAAGATGGAGTAAAAGTCCAGCAAGCTACTATAGC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGCTATAGTAGCTTGCTaGACTTTTACTCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVAIVAC*TFTPSC
Trigger: ACAAGATGGAGTAAAAGTCCAGCAAGCTACTATAGC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTGTTGGTTGAAACATTaGGAGTTGCTGGATTCGAAT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVCWLKH*ELLDSN
Trigger: ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTGTTGGTTGAAACATTaGGAGTTGCTGGATTCGAAT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFCWLKH*ELLDSN
Trigger: ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGCACTAGAAATAAAATaGGACTGGCCAATTTTTAGT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIALEIK*DWPIFS
Trigger: ACTAAAAATTGGCCAGTCCCATTTTATTTCTAGTGC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAATTAGAACTGGTTCATaGAATAATGATGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: HVLTPNPGILKEAKNENIIRTGS*NNDAEC
Trigger: ACACTCTGCATCATTATTCCATGAACCAGTTCTAAT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAAAGTAGACTCAGAATaGTATGCAGAACAGACTGTC +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVKVDSE*YAEQTV
Trigger: GACAGTCTGTTCTGCATACCATTCTGAGTCTACTTT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGGTGGAAGAATTACCTaGTTTAGTTTTTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFGGRIT*FSFCRR
Trigger: TCTCCTACAAAAACTAAATCAGGTAATTCTTCCACC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGATAACCCAGCATTCTaGACTTGCAAATTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVDNPAF*TCKFER
Trigger: TCTTTCAAATTTGCAAGTTCAGAATGCTGGGTTATC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGTGGTAATAAAGATCTaGGATGCATCTCAGATTACT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFVVIKI*DASQIT
Trigger: AGTAATCTGAGATGCATCTCAGATCTTTATTACCAC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAAAGGGAATGAACAGTaGAATGCCATTAAACAAGAC +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFKGNEQ*NAIKQD
Trigger: GTCTTGTTTAATGGCATTTCACTGTTCATTCCCTTT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR TCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTCAATTTATGTGGGATaGCAACTTAGTGACATGCAT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFSIYVG*QLSDMH
Trigger: ATGCATGTCACTAAGTTGTCATCCCACATAAATTGA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTATGAACACTACCAAATaGTCCTCTGTACCAAACAAA +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFMNTTK*SSVPNK
Trigger: TTTGTTTGGTACAGAGGAGCATTTGGTAGTGTTCAT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCTGTACACTACCACTTaGATTTTGTACTTGTATGAC +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVLYTTT*ILYLYD
Trigger: GTCATACAAGTACAAAATCCAAGTGGTAGTGTACAG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAGTTGTGGAATTACTTaGTACTGTACACTACCACTT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFSCGIT*YCTLPL
Trigger: AAGTGGTAGTGTACAGTACCAAGTAATTCCACAACT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAGTTGTGGAATTACTTaGTACTGTACACTACCACTT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVSCGIT*YCTLPL
Trigger: AAGTGGTAGTGTACAGTACCAAGTAATTCCACAACT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAACATTGGGAGTTGCTaGATTCGAATCTTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFNIGSC*IRILRN
Trigger: ATTTCTCAAGATTCGAATCCAGCAACTCCCAATGTT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAACATTGGGAGTTGCTaGATTCGAATCTTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVNIGSC*IRILRN
Trigger: ATTTCTCAAGATTCGAATCCAGCAACTCCCAATGTT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAGAATTCTTCCATGTTaGTTGAAACATTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVRILPC*LKHWEL
Trigger: CAACTCCCAATGTTTCAACCAACATGGAAGAATTCT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAATGGAGAAAGTAATTaGACTTCACTGATTGTCTGC +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVNGESN*TSLIVC
Trigger: GCAGACAATCAGTGAAGTCCAATTACTTTCTCCATT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGCACATCAATTTATGTaGGATGACAACTTAGTGACA +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFAHQFM*DDNLVT
Trigger: TGTCACTAAGTTGTCATCCCACATAAATTGATGTGC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTACACACTTTTATTACTaGTCTCATGAGAGTGTGATA +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFTHFYY*SHESVI
Trigger: TATCACACTCTCATGAGAGCAGTAATAAAAGTGTGT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR GCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTTTAATACCCTATGCTaGACATCAATTTATGTGGGA +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVFNTLC*TSIYVG
Trigger: TCCCACATAAATTGATGTGCAGCATAGGGTATTAAA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGAAATAAAATGGGACTaGCCAATTTTTAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFEIKWD*PIFSRG
Trigger: TCCTCTACTAAAAATTGGCCAGTCCCATTTTATTTC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGCACTAGAAATAAAATaGGACTGGCCAATTTTTAGT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVALEIK*DWPIFS
Trigger: ACTAAAAATTGGCCAGTCCCATTTTATTTCTAGTGC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGATTAGAACTGGTTCATaGAATAATGATGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVIRTGS*NNDAEC
Trigger: ACACTCTGCATCATTATTCCATGAACCAGTTCTAAT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CCA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTATTAGAACTGGTTCATaGAATAATGATGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFIRTGS*NNDAEC
Trigger: ACACTCTGCATCATTATTCCATGAACCAGTTCTAAT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS CCA 90 bp GAGGCCGGTCCCGCCCGCCCGCGGTGGCTCGGAGGAGGCTGTAGCTaGCACAGGCTCTGCCTCTTTTTCCGCGAATGGCCGCCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: EAGPARPRWLGGGCS*HRLCLFFREWPPLG
Trigger: GCCCAGCGGCGGCCATTCGCGGAAAAAGAGGCAGAGCCTGTGCCAGCTACAGCCTCCTCCGAGCCACCGCGGGCGGGCGGGACCGGCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000432066.2
ENST00000448246.1
CDS GCA 90 bp GCCCGCCCGCGGTGGCTCGGAGGAGGCTGTAGCTGGCACAGGCTCTaGCTCTTTTTCCGCGAATGGCCGCCGCTGGGCTGTGGCGTAGCA +
Preference number: 5 (lower is better)
Translates to: ARPRWLGGGCSWHRL*LFFREWPPLGCGVA
Trigger: TGCTACGCCACAGCCCAGCGGCGGCCATTCGCGGAAAAAGAGGCAGAGCCTGTGCCAGCTACAGCCTCCTCCGAGCCACCGCGGGCGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432066.2
ENST00000448246.1
CDS CCA 90 bp GGAGGAGGCTGTAGCTGGCACAGGCTCTGCCTCTTTTTCCGCGAATaGCCGCCGCTGGGCTGTGGCGTAGCAGCTCCTCTCTCCGCCCGA +
Preference number: 5 (lower is better)
Translates to: GGGCSWHRLCLFFRE*PPLGCGVAAPLSAR
Trigger: TCGGGCGGAGAGAGGAGCTGCTACGCCACAGCCCAGCGGCGGCCATTCGCGGAAAAAGAGGCAGAGCCTGTGCCAGCTACAGCCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432066.2
ENST00000448246.1
CDS GCA 90 bp TGGCTCAGAGGTTTTCCCTCCTTCTGTAGCCATCGCCGCTGCCGCTaGCGCCTCCTCCTCCTCCTCCTTCTTCTGATCGCTCATCCCGCA +
Preference number: 5 (lower is better)
Translates to: WLRGFPSFCSHRRCR*RLLLLLLLLIAHPA
Trigger: TGCGGGATGAGCGATCAGAAGAAGGAGGAGGAGGAGGAGGCGGCAGCGGCAGCGGCGATGGCTACAGAAGGAGGGAAAACCTCTGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000440636.1
ENST00000448246.1
CDS GCA 90 bp ATTCTCTGGCTCAGAGGTTTTCCCTCCTTCTGTAGCCATCGCCGCTaGCGCTGCCGCCTCCTCCTCCTCCTCCTTCTTCGCTCATCCCGC +
Preference number: 5 (lower is better)
Translates to: ILWLRGFPSFCSHRR*RCRLLLLLLLRSSR
Trigger: GCGGGATGAGCGAAGAAGGAGGAGGAGGAGGAGGCGGCAGCGGCAGCGGCGATGGCTACAGAAGGAGGGAAAACCTCTGAGCCAGAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649633.1
CDS GCA 90 bp TGGCTCAGAGGTTTTCCCTCCTTCTGTAGCCATCGCCGCTGCCGCTaGCGCCTCCTCCTCCTCCTCCTTCTTCGCTCATCCCGCATTAAC +
Preference number: 5 (lower is better)
Translates to: WLRGFPSFCSHRRCR*RLLLLLLLRSSRIN
Trigger: GTTAATGCGGGATGAGCGAAGAAGGAGGAGGAGGAGGAGGCGGCAGCGGCAGCGGCGATGGCTACAGAAGGAGGGAAAACCTCTGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649633.1
CDS GCA 90 bp ATTCTCTGGCTCAGAGGTTTTCCCTCCTTCTGTAGCCATCGCCGCTaGCGCTGCCGCCTCCTCCTCCTCCTCCTTCTTCTGATCGCTCAT +
Preference number: 5 (lower is better)
Translates to: ILWLRGFPSFCSHRR*RCRLLLLLLLLIAH
Trigger: ATGAGCGATCAGAAGAAGGAGGAGGAGGAGGAGGCGGCAGCGGCAGCGGCGATGGCTACAGAAGGAGGGAAAACCTCTGAGCCAGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000440636.1
ENST00000448246.1
CDS GCA 90 bp CCATTGGAAGTCCCACTATCAGCAGTAGCAGCAGGCTGGCCAACCTaGCCAGTCCCTCCTCCGGCAGCCACGTTGTTTATCACTGGCAAA +
Preference number: 5 (lower is better)
Translates to: PLEVPLSAVAAGWPT*PVPPPAATLFITGK
Trigger: TTTGCCAGTGATAAACAACGTGGCTGCCGGAGGAGGGACTGGGCAGGTTGGCCAGCCTGCTGCTACTGCTGATAGTGGGACTTCCAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS TCA 90 bp TGCAGCACCCAGGTTGGCAACGCTCACTGTCTGAAGGTTAGGCACTaGTGCAAGCTGGGCAGTATTCAAAGTTATTGGGGCACCAGCAAC +
Preference number: 5 (lower is better)
Translates to: CSTQVGNAHCLKVRH*CKLGSIQSYWGTSN
Trigger: GTTGCTGGTGCCCCAATAACTTTGAATACTGCCCAGCTTGCATCAGTGCCTAACCTTCAGACAGTGAGCGTTGCCAACCTGGGTGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS GCA 90 bp TGCAACACTAGTGATTGTAACGGGAACTCCCTGCACTTGAACACCTaGAGCACCCAGGTTGGCAACGCTCACTGTCTGAAGGTTAGGCAC +
Preference number: 5 (lower is better)
Translates to: CNTSDCNGNSLHLNT*STQVGNAHCLKVRH
Trigger: GTGCCTAACCTTCAGACAGTGAGCGTTGCCAACCTGGGTGCTGCAGGTGTTCAAGTGCAGGGAGTTCCCGTTACAATCACTAGTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp AGTTGGTCAGGACTAACAGCACCTATCGTGGCATTAGCAATTCCTCCAACTGCTAGACAGGAGAATCGCTaGAACCTGGGAGGCGGCGGT +
Preference number: 5 (lower is better)
Translates to: SWSGLTAPIVALAIPPTARQENR*NLGGGG
Trigger: ACCGCCGCCTCCCAGGTTCAAGCGATTCTCCTGTCT...AGCAGTTGGAGGAATTGCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAGGGAACTCCCTGCACTaGAACACCTGCAGCACCCAG +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIGNSLH*NTCSTQ
Trigger: CTGGGTGCTGCAGGTGTTCAAGTGCAGGGAGTTCCC...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp CAATTAGGACAGGAACAGGCAACTCTTCGAAGCCTCTTGCCAGGTTGTACCTCTAAGCCTCTTGCCAGGTaGTACCTCTTGATCAGAAGT +
Preference number: 5 (lower is better)
Translates to: QLGQEQATLRSLLPGCTSKPLAR*YLLIRS
Trigger: ACTTCTGATCAAGAGGTACAACCTGGCAAGAGGCTT...AGAGGTACAACCTGGCAAGAGGCTTCGAAGAGTTGCCTGTTCCTGTCCTAATTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CAA 90 bp CAATTAGGACAGGAACAGGCAACTCTTCGAAGCCTCTTGCCAGGTTGTACCTCTTCAACACTTCACGTGTaGACCCCAAACCCTGGAATA +
Preference number: 5 (lower is better)
Translates to: QLGQEQATLRSLLPGCTSSTLHV*TPNPGI
Trigger: TATTCCAGGGTTTGGGGTCAACACGTGAAGTGTTGA...AGAGGTACAACCTGGCAAGAGGCTTCGAAGAGTTGCCTGTTCCTGTCCTAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAGACAGGAGAATCGCTaGAACCTGGGAGGCGGCGGT +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIRQENR*NLGGGG
Trigger: ACCGCCGCCTCCCAGGTTCAAGCGATTCTCCTGTCT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS TCA 90 bp AGAACTAGACGAACTAGAGGCTGGTTGAGAAACGTTATTCTCTTTTaGAGCAGGAGGAGTGGAGGCAACAAGTTGCCAAGCGTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RTRRTRGWLRNVILF*SRRSGGNKLPSVSS
Trigger: GCTGGAAACGCTTGGCAACTTGTTGCCTCCACTCCTCCTGCTTCAAAAGAGAATAACGTTTCTCAACCAGCCTCTAGTTCGTCTAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CCA 90 bp GATTTACTGCTTGAAGTTGAACATTCTGTAAAGGCTGCTGCTGGATaGTCTGAATCGTCTGCCCTGACTGGAGTTGAAACGACTGTGGTG +
Preference number: 5 (lower is better)
Translates to: DLLLEVEHSVKAAAG*SESSALTGVETTVV
Trigger: CACCACAGTCGTTTCAACTCCAGTCAGGGCAGACGATTCAGACCATCCAGCAGCAGCCTTTACAGAATGTTCAACTTCAAGCAGTAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS GCA 90 bp GTGTTTGAGATTCTTCAATGGTGCGTTCAGAACTACTGGCTGATGTaGTTGCATACTGGCCAGTATCTGCTGAGCTCACTAATGTGTCAC +
Preference number: 5 (lower is better)
Translates to: VFEILQWCVQNYWLM*LHTGQYLLSSLMCH
Trigger: GTGACACATTAGTGAGCTCAGCAGATACTGGCCAGTATGCAAGCACATCAGCCAGTAGTTCTGAACGCACCATTGAAGAATCTCAAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS GCA 90 bp GTCAGGACTAACAGCACCTATCGTGGCATTAGCAATTCCTCCAACTaGTACAGTTACAGGAGCTATAGTAGCTTGCTGGACTTTTACTCC +
Preference number: 5 (lower is better)
Translates to: VRTNSTYRGISNSSN*YSYRSYSSLLDFYS
Trigger: GGAGTAAAAGTCCAGCAAGCTACTATAGCTCCTGTAACTGTAGCAGTTGGAGGAATTGCTAATGCCACGATAGGTGCTGTTAGTCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222584.8
ENST00000432066.2
ENST00000448246.1
ENST00000649633.1
CDS CCA 90 bp TCTTCAATGGTGCGTTCAGAACTACTGGCTGATGTGCTTGCATACTaGCCAGTATCTGCTGAGCTCACTAATGTGTCACTGCTTGTCAAA +
Preference number: 5 (lower is better)
Translates to: SSMVRSELLADVLAY*PVSAELTNVSLLVK
Trigger: TTTGACAAGCAGTGACACATTAGTGAGCTCAGCAGATACTGGCCAGTATGCAAGCACATCAGCCAGTAGTTCTGAACGCACCATTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGGGAACTCCCTGCACTaGAACACCTGCAGCACCCAG +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVGNSLH*NTCSTQ
Trigger: CTGGGTGCTGCAGGTGTTCAAGTGCAGGGAGTTCCC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp AGTTGGTCAGGACTAACAGCACCTATCGTGGCATTAGCAATTCCTCCAACTGCTCTCCGTGTGAATCTTTaGCCACAAAACATCCAGTTG +
Preference number: 5 (lower is better)
Translates to: SWSGLTAPIVALAIPPTALRVNL*PQNIQL
Trigger: CAACTGGATGTTTTGTGGCAAAAGATTCACACGGAG...AGCAGTTGGAGGAATTGCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CAA 90 bp CAATTAGGACAGGAACAGGCAACTCTTCGAAGCCTCTTGCCAGGTTGTACCTCTTTGAAACATTGGGAGTaGCTGGATTCGAATCTTGAG +
Preference number: 5 (lower is better)
Translates to: QLGQEQATLRSLLPGCTSLKHWE*LDSNLE
Trigger: CTCAAGATTCGAATCCAGCAACTCCCAATGTTTCAA...AGAGGTACAACCTGGCAAGAGGCTTCGAAGAGTTGCCTGTTCCTGTCCTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CAA 90 bp CAATTAGGACAGGAACAGGCAACTCTTCGAAGCCTCTTGCCAGGTTGTACCTCTATTCTTCCATGTTGGTaGAAACATTGGGAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: QLGQEQATLRSLLPGCTSILPCW*KHWELL
Trigger: CAGCAACTCCCAATGTTTCAACCAACATGGAAGAAT...AGAGGTACAACCTGGCAAGAGGCTTCGAAGAGTTGCCTGTTCCTGTCCTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAGACAGGAGAATCGCTaGAACCTGGGAGGCGGCGGT +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFRQENR*NLGGGG
Trigger: ACCGCCGCCTCCCAGGTTCAAGCGATTCTCCTGTCT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS TCA 90 bp GAGCAATCTGAGCAAGAGTTGTGCCACCACTTGAAGACACTGGGGTaGTGGTTAATTGTTGGGATAACCCAGCATTCTGAACTTGCAAAT +
Preference number: 5 (lower is better)
Translates to: EQSEQELCHHLKTLG*WLIVGITQHSELAN
Trigger: ATTTGCAAGTTCAGAATGCTGGGTTATCCCAACAATTAACCATCACCCCAGTGTCTTCAAGTGGTGGCACAACTCTTGCTCAGATTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCCTCCGGCAGCCACGTaGTTTATCACTGGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVPPAAT*FITGKA
Trigger: AGCTTTGCCAGTGATAAACAACGTGGCTGCCGGAGG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCCTCCGGCAGCCACGTaGTTTATCACTGGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFPPAAT*FITGKA
Trigger: AGCTTTGCCAGTGATAAACAACGTGGCTGCCGGAGG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATACTGGCTGATGTGCTaGCATACTGGCCAGTATCTG +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIYWLMC*HTGQYL
Trigger: CAGATACTGGCCAGTATGCAAGCACATCAGCCAGTA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATACTCCATCTTGTCCTaGCTGCTGACCTGCAACACT +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIYSILS*LLTCNT
Trigger: AGTGTTGCAGGTCAGCAGCAAGGACAAGATGGAGTA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAGTGGAGGCAACAAGTaGCCAAGCGTTTCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFSGGNK*PSVSSK
Trigger: CTTGCTGGAAACGCTTGGCAACTTGTTGCCTCCACT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACCGGAACTGTCTGATTaGCCAGGTTTTGAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIPELSD*PGFEQE
Trigger: TTCTTGCTCAAAACCTGGCAAATCAGACAGTTCCGG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACAATCTGAGCAAGAGTaGTGCCACCACTTGAAGACA +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIQSEQE*CHHLKT
Trigger: TGTCTTCAAGTGGTGGCACAACTCTTGCTCAGATTG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACAGTATTCAAAGTTATaGGGGCACCAGCAACAGCCA +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIQYSKL*GHQQQP
Trigger: TGGCTGTTGCTGGTGCCCCAATAACTTTGAATACTG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATTGCTGCAAATGCACTaGTGTGAGTTGGTCAGGACT +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENILLQMH*CELVRT
Trigger: AGTCCTGACCAACTCACACAAGTGCATTTGCAGCAA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAAGCCTCTTGCCAGGTaGTACCTCTTGATCAGAAGT +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIKPLAR*YLLIRS
Trigger: ACTTCTGATCAAGAGGTACAACCTGGCAAGAGGCTT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAACACCAGGTCTAATTaGGACCGGAACTGTCTGATT +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENINTRSN*DRNCLI
Trigger: AATCAGACAGTTCCGGTCCAAATTAGACCTGGTGTT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTACTGGCTGATGTGCTaGCATACTGGCCAGTATCTG +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFYWLMC*HTGQYL
Trigger: CAGATACTGGCCAGTATGCAAGCACATCAGCCAGTA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAGCCTGAATGATCTGTaGCTGAGGCTGTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVSLNDL*LRLLDL
Trigger: CAGATCCAACAGCCTCAGCAACAGATCATTCAGGCT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTACTCCATCTTGTCCTaGCTGCTGACCTGCAACACT +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFYSILS*LLTCNT
Trigger: AGTGTTGCAGGTCAGCAGCAAGGACAAGATGGAGTA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAGGAGCTATAGTAGCTaGCTGGACTTTTACTCCATC +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIRSYSS*LDFYSI
Trigger: GATGGAGTAAAAGTCCAGCAAGCTACTATAGCTCCT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp CTTTTCAGAATTCTTCCATGTTGGTTGAAACATTGGGAGTTGCTGGATTCGAATTTGCTGCAAATGCACTaGTGTGAGTTGGTCAGGACT +
Preference number: 5 (lower is better)
Translates to: LFRILPCWLKHWELLDSNLLQMH*CELVRT
Trigger: AGTCCTGACCAACTCACACAAGTGCATTTGCAGCAA...ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACATGGAAGAATTCTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAGAAGTCTGCTGGCCTaGCTGCAAATGCACTTGTGT +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFRSLLA*LQMHLC
Trigger: ACACAAGTGCATTTGCAGCAAGGCCAGCAGACTTCT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATGCTGGATTCGAATCTaGAGAAATGGCTGCAACTGT +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENICWIRI*RNGCNC
Trigger: ACAGTTGCAGCCATTTCTCAAGATTCGAATCCAGCA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATACTCTGTAATCCACTaGACCAGCCCATTTCCAGAT +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIYSVIH*TSPFPD
Trigger: ATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS CCA 90 bp CACTGTCTGAAGTTGTGGAATTACTTGGTACTGTACACTACCACTTaGATTTTGTACTTGTATGACTTGAAATTGACCAGGGGTGGAAGA +
Preference number: 5 (lower is better)
Translates to: HCLKLWNYLVLYTTT*ILYLYDLKLTRGGR
Trigger: TCTTCCACCCCTGGTCAATTTCAAGTCATACAAGTACAAAATCCAAGTGGTAGTGTACAGTACCAAGTAATTCCACAACTTCAGACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTTGTTGTCCAGTTGCTaGATTTTCACCAGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFLLSSC*IFTRSP
Trigger: GGGACTCCTGGTGAAAATCAAGCAACTGGACAACAA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATTGTACTTGTATGACTaGAAATTGACCAGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENILYLYD*KLTRGG
Trigger: TCCACCCCTGGTCAATTTCAAGTCATACAAGTACAA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATTCCACTGTCTGAAGTaGTGGAATTACTTGGTACTG +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIFHCLK*WNYLVL
Trigger: CAGTACCAAGTAATTCCACAACTTCAGACAGTGGAA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCCGGAACTGTCTGATTaGCCAGGTTTTGAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFPELSD*PGFEQE
Trigger: TTCTTGCTCAAAACCTGGCAAATCAGACAGTTCCGG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGGCAGAAGTAGTGGTGTaGGTGGGTGTGGAAACTAAT +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVAEVVV*VGVETN
Trigger: ATTAGTTTCCACACCCACCAACACCACTACTTCTGC...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTGCAGAAGTAGTGGTGTaGGTGGGTGTGGAAACTAAT +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFAEVVV*VGVETN
Trigger: ATTAGTTTCCACACCCACCAACACCACTACTTCTGC...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAGTAGCAGCAGGTGTTaGAGATTCTTCAATGGTGCG +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFSSSRC*RFFNGA
Trigger: CGCACCATTGAAGAATCTCAAACACCTGCTGCTACT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAGTAGCAGCAGGTGTTaGAGATTCTTCAATGGTGCG +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVSSSRC*RFFNGA
Trigger: CGCACCATTGAAGAATCTCAAACACCTGCTGCTACT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCAGTATTCAAAGTTATaGGGGCACCAGCAACAGCCA +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFQYSKL*GHQQQP
Trigger: TGGCTGTTGCTGGTGCCCCAATAACTTTGAATACTG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp CTTTTCAGAATTCTTCCATGTTGGTTGAAACATTGGGAGTTGCTGGATTCGAATAGGAGCTATAGTAGCTaGCTGGACTTTTACTCCATC +
Preference number: 5 (lower is better)
Translates to: LFRILPCWLKHWELLDSNRSYSS*LDFYSI
Trigger: GATGGAGTAAAAGTCCAGCAAGCTACTATAGCTCCT...ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACATGGAAGAATTCTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CAA 90 bp CTTTTCAGAATTCTTCCATGTTGGTTGAAACATTGGGAGTTGCTGGATTCGAATTGCTGGATTCGAATCTaGAGAAATGGCTGCAACTGT +
Preference number: 5 (lower is better)
Translates to: LFRILPCWLKHWELLDSNCWIRI*RNGCNC
Trigger: ACAGTTGCAGCCATTTCTCAAGATTCGAATCCAGCA...ATTCGAATCCAGCAACTCCCAATGTTTCAACCAACATGGAAGAATTCTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAATGTTGGTTGAAACATaGGGAGTTGCTGGATTCGAA +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIMLVET*GVAGFE
Trigger: TTCGAATCCAGCAACTCCCAATGTTTCAACCAACAT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTCAACACTTCACGTGTaGACCCCAAACCCTGGAATA +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFSTLHV*TPNPGI
Trigger: TATTCCAGGGTTTGGGGTCAACACGTGAAGTGTTGA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTCAACACTTCACGTGTaGACCCCAAACCCTGGAATA +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVSTLHV*TPNPGI
Trigger: TATTCCAGGGTTTGGGGTCAACACGTGAAGTGTTGA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS TCA 90 bp TTGTACTTGTATGACTTGAAATTGACCAGGGGTGGAAGAATTACCTaGTTTAGTTTTTGTAGGAGATGCACTCCCGTTATTACTGCTGGA +
Preference number: 5 (lower is better)
Translates to: LYLYDLKLTRGGRIT*FSFCRRCTPVITAG
Trigger: TCCAGCAGTAATAACGGGAGTGCATCTCCTACAAAAACTAAATCAGGTAATTCTTCCACCCCTGGTCAATTTCAAGTCATACAAGTACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTTCCAGCAAGTTGCGTaGTTACCAGTTCTAGCTGTT +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVFQQVA*LPVLAV
Trigger: AACAGCTAGAACTGGTAACAACGCAACTTGCTGGAA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAAACGTTATTCTCTTTaGAAGCAGGAGGAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFKRYSL*KQEEWR
Trigger: CCTCCACTCCTCCTGCTTCAAAAGAGAATAACGTTT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAAAGTTGTGGAATTACTaGGTACTGTACACTACCACT +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIKLWNY*VLYTTT
Trigger: AGTGGTAGTGTACAGTACCAAGTAATTCCACAACTT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATGGATTGATTTGAATTaGTTGACCTTCCACTGTCTG +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIWIDLN*LTFHCL
Trigger: CAGACAGTGGAAGGTCAACAAATTCAAATCAATCCA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAACACCAGGTCTAATTaGGACCGGAACTGTCTGATT +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVNTRSN*DRNCLI
Trigger: AATCAGACAGTTCCGGTCCAAATTAGACCTGGTGTT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCTAATGTGTCACTGCTaGTCAAAGACGTTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVLMCHC*SKTLKQ
Trigger: CTGCTTCAACGTCTTTGACAAGCAGTGACACATTAG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAGGAGCTATAGTAGCTaGCTGGACTTTTACTCCATC +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFRSYSS*LDFYSI
Trigger: GATGGAGTAAAAGTCCAGCAAGCTACTATAGCTCCT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCTCCGTGTGAATCTTTaGCCACAAAACATCCAGTTG +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVLRVNL*PQNIQL
Trigger: CAACTGGATGTTTTGTGGCAAAAGATTCACACGGAG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTGCTGGATTCGAATCTaGAGAAATGGCTGCAACTGT +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVCWIRI*RNGCNC
Trigger: ACAGTTGCAGCCATTTCTCAAGATTCGAATCCAGCA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATACAGAATTCTTCCATGTaGGTTGAAACATTGGGAGTT +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIQNSSM*VETLGV
Trigger: AACTCCCAATGTTTCAACCAACATGGAAGAATTCTG...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTTTGTTGTTGTCCAGTaGCTTGATTTTCACCAGGAG +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFFVVVQ*LDFHQE
Trigger: CTCCTGGTGAAAATCAAGCAACTGGACAACAACAAA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTTTGTTGTTGTCCAGTaGCTTGATTTTCACCAGGAG +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVFVVVQ*LDFHQE
Trigger: CTCCTGGTGAAAATCAAGCAACTGGACAACAACAAA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATAATTGATTTGAATTTGTaGACCTTCCACTGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIIDLNL*TFHCLK
Trigger: CTTCAGACAGTGGAAGGTCAACAAATTCAAATCAAT...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCCTGCTGAAGAGAATTaGATTGATCCTGTGCATTCT +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVPAEEN*IDPVHS
Trigger: AGAATGCACAGGATCAATCAAATTCTCTTCAGCAGG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCCTGCTGAAGAGAATTaGATTGATCCTGTGCATTCT +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFPAEEN*IDPVHS
Trigger: AGAATGCACAGGATCAATCAAATTCTCTTCAGCAGG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGTTGAAACATTGGGAGTaGCTGGATTCGAATCTTGAG +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVLKHWE*LDSNLE
Trigger: CTCAAGATTCGAATCCAGCAACTCCCAATGTTTCAA...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTTGAAACATTGGGAGTaGCTGGATTCGAATCTTGAG +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFLKHWE*LDSNLE
Trigger: CTCAAGATTCGAATCCAGCAACTCCCAATGTTTCAA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTATGTTGGTTGAAACATaGGGAGTTGCTGGATTCGAA +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFMLVET*GVAGFE
Trigger: TTCGAATCCAGCAACTCCCAATGTTTCAACCAACAT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp CACGTGTTGACCCCAAACCCTGGAATACTTAAAGAAGCCAAGAATGAAAACATATACTTGCAATTGTTATaGCAGGCAACAACTTGTACA +
Preference number: 5 (lower is better)
Translates to: HVLTPNPGILKEAKNENIYLQLL*QATTCT
Trigger: TGTACAAGTTGTTGCCTGCAATAACAATTGCAAGTA...TATGTTTTCATTCTTGGCTTCTTTAAGTATTCCAGGGTTTGGGGTCAACACGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222584.8
CDS CCA 90 bp AGTTGGATTGATTTGAATTTGTTGACCTTCCACTGTCTGAAGTTGTaGAATTACTTGGTACTGTACACTACCACTTGGATTTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: SWIDLNLLTFHCLKL*NYLVLYTTTWILYL
Trigger: CAAGTACAAAATCCAAGTGGTAGTGTACAGTACCAAGTAATTCCACAACTTCAGACAGTGGAAGGTCAACAAATTCAAATCAATCCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAAGTTGTGGAATTACTaGGTACTGTACACTACCACT +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVKLWNY*VLYTTT
Trigger: AGTGGTAGTGTACAGTACCAAGTAATTCCACAACTT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTTGGATTGATTTGAATTaGTTGACCTTCCACTGTCTG +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFWIDLN*LTFHCL
Trigger: CAGACAGTGGAAGGTCAACAAATTCAAATCAATCCA...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCAGAATTCTTCCATGTaGGTTGAAACATTGGGAGTT +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVQNSSM*VETLGV
Trigger: AACTCCCAATGTTTCAACCAACATGGAAGAATTCTG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCAGAATTCTTCCATGTaGGTTGAAACATTGGGAGTT +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFQNSSM*VETLGV
Trigger: AACTCCCAATGTTTCAACCAACATGGAAGAATTCTG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGAACTCTATGTTCCTCTaGTGTCTCCAAATGGAGAAA +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVNSMFL*CLQMEK
Trigger: TTTCTCCATTTGGAGACACAAGAGGAACATAGAGTT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGATTGATTTGAATTTGTaGACCTTCCACTGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVIDLNL*TFHCLK
Trigger: CTTCAGACAGTGGAAGGTCAACAAATTCAAATCAAT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGACTAGTTGGATTGATTaGAATTTGTTGACCTTCCAC +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVTSWID*NLLTFH
Trigger: GTGGAAGGTCAACAAATTCAAATCAATCCAACTAGT...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTAGCTGTGAGTATAGCTaGATTATTACCTGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFSCEYS*IITCRN
Trigger: ATTTCTGCAGGTAATAATCAAGCTATACTCACAGCT...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS-3UTR CAA 90 bp GTAGATTTAATACCCTATGCTGCACATCAATTTATGTGGGATGACAACTTAGTGCCACAAAACATCCAGTaGCATATAAAAGGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: VDLIPYAAHQFMWDDNLVPQNIQ*HIKGLS
Trigger: AGAAAGACCTTTTATATGCAACTGGATGTTTTGTGG...CACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGGTATTAAATCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS-3UTR CAA 90 bp GAAAACATAATTTCCTACTCTGTAATCCACTTGACCAGCCCATTTCCAGATTTTCCACAAAACATCCAGTaGCATATAAAAGGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: ENIISYSVIHLTSPFPDFPQNIQ*HIKGLS
Trigger: AGAAAGACCTTTTATATGCAACTGGATGTTTTGTGG...AAAATCTGGAAATGGGCTGGTCAAGTGGATTACAGAGTAGGAAATTATGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000448246.1
ENST00000649633.1
CDS CCA 72 bp CTGCCTCTTTTTCCGCGAATGGCCGCCGCTGGGCTGTaGCGTAGCAGCTCCTCTCTCCGCCCGAGCCCGGCT +
Preference number: 6 (lower is better)
Translates to: LPLFPRMAAAGL*RSSSSLRPSPA
Trigger: AGCCGGGCTCGGGCGGAGAGAGGAGCTGCTACGCCACAGCCCAGCGGCGGCCATTCGCGGAAAAAGAGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432066.2
ENST00000448246.1
CDS GCA 72 bp GGTTTTCCCTCCTTCTGTAGCCATCGCCGCTGCCGCTaGCGCCTCCTCCTCCTCCTCCTTCTTCGCTCATCC +
Preference number: 6 (lower is better)
Translates to: GFPSFCSHRRCR*RLLLLLLLRSS
Trigger: GGATGAGCGAAGAAGGAGGAGGAGGAGGAGGCGGCAGCGGCAGCGGCGATGGCTACAGAAGGAGGGAAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649633.1
CDS CCA 72 bp TGTAGCTGGCACAGGCTCTGCCTCTTTTTCCGCGAATaGCCGCCGCTGGGCTGTGGCGTAGCAGCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: CSWHRLCLFFRE*PPLGCGVAAPL
Trigger: GAGAGGAGCTGCTACGCCACAGCCCAGCGGCGGCCATTCGCGGAAAAAGAGGCAGAGCCTGTGCCAGCTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432066.2
ENST00000448246.1
CDS GCA 72 bp GGTTTTCCCTCCTTCTGTAGCCATCGCCGCTGCCGCTaGCGCCTCCTCCTCCTCCTCCTTCTTCTGATCGCT +
Preference number: 6 (lower is better)
Translates to: GFPSFCSHRRCR*RLLLLLLLLIA
Trigger: AGCGATCAGAAGAAGGAGGAGGAGGAGGAGGCGGCAGCGGCAGCGGCGATGGCTACAGAAGGAGGGAAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222584.8
ENST00000440636.1
ENST00000448246.1
CDS CAA 90 bp GCAGCAGGCTGGCCAACCTGCCCAGTCCCTCCTCCGGCAGCCACGTaGTTTATCACTGGCAAAGCTAGAGTCACTCCTCCAATGTTAATT +
Preference number: 6 (lower is better)
Translates to: AAGWPTCPVPPPAAT*FITGKARVTPPMLI
Trigger: AATTAACATTGGAGGAGTGACTCTAGCTTTGCCAGTGATAAACAACGTGGCTGCCGGAGGAGGGACTGGGCAGGTTGGCCAGCCTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS TCA 72 bp GCAACACTAGTGATTGTAACGGGAACTCCCTGCACTTaGACACCTGCAGCACCCAGGTTGGCAACGCTCACT +
Preference number: 6 (lower is better)
Translates to: ATLVIVTGTPCT*TPAAPRLATLT
Trigger: AGTGAGCGTTGCCAACCTGGGTGCTGCAGGTGTTCAAGTGCAGGGAGTTCCCGTTACAATCACTAGTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS GCA 72 bp AGTGATTGTAACGGGAACTCCCTGCACTTGAACACCTaGAGCACCCAGGTTGGCAACGCTCACTGTCTGAAG +
Preference number: 6 (lower is better)
Translates to: SDCNGNSLHLNT*STQVGNAHCLK
Trigger: CTTCAGACAGTGAGCGTTGCCAACCTGGGTGCTGCAGGTGTTCAAGTGCAGGGAGTTCCCGTTACAATCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 72 bp TGCAACACTAGTGATTGTAACGGGAACTCCCTGCACTaGAACACCTGCAGCACCCAGGTTGGCAACGCTCAC +
Preference number: 6 (lower is better)
Translates to: CNTSDCNGNSLH*NTCSTQVGNAH
Trigger: GTGAGCGTTGCCAACCTGGGTGCTGCAGGTGTTCAAGTGCAGGGAGTTCCCGTTACAATCACTAGTGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS TCA 72 bp CAGGTTGGCAACGCTCACTGTCTGAAGGTTAGGCACTaGTGCAAGCTGGGCAGTATTCAAAGTTATTGGGGC +
Preference number: 6 (lower is better)
Translates to: QVGNAHCLKVRH*CKLGSIQSYWG
Trigger: GCCCCAATAACTTTGAATACTGCCCAGCTTGCATCAGTGCCTAACCTTCAGACAGTGAGCGTTGCCAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS GCA 72 bp ACTGGCCAGTATCTGCTGAGCTCACTAATGTGTCACTaGTTGTCAAAGACGTTGAAGCAGTGGTTGTGCAGG +
Preference number: 6 (lower is better)
Translates to: TGQYLLSSLMCH*LSKTLKQWLCR
Trigger: CCTGCACAACCACTGCTTCAACGTCTTTGACAAGCAGTGACACATTAGTGAGCTCAGCAGATACTGGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CCA 72 bp GTGCGTTCAGAACTACTGGCTGATGTGCTTGCATACTaGCCAGTATCTGCTGAGCTCACTAATGTGTCACTG +
Preference number: 6 (lower is better)
Translates to: VRSELLADVLAY*PVSAELTNVSL
Trigger: CAGTGACACATTAGTGAGCTCAGCAGATACTGGCCAGTATGCAAGCACATCAGCCAGTAGTTCTGAACGCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 72 bp AGGAGCTATAGTAGCTTGCTGGACTTTTACTCCATCTaGTCCTTGCTGCTGACCTGGGAGCCTGAGGTTTTG +
Preference number: 6 (lower is better)
Translates to: RSYSSLLDFYSI*SLLLTWEPEVL
Trigger: CAAAACCTCAGGCTCCCAGGTCAGCAGCAAGGACAAGATGGAGTAAAAGTCCAGCAAGCTACTATAGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS TCA 72 bp CGAACTAGAGGCTGGTTGAGAAACGTTATTCTCTTTTaGAGCAGGAGGAGTGGAGGCAACAAGTTGCCAAGC +
Preference number: 6 (lower is better)
Translates to: RTRGWLRNVILF*SRRSGGNKLPS
Trigger: GCTTGGCAACTTGTTGCCTCCACTCCTCCTGCTTCAAAAGAGAATAACGTTTCTCAACCAGCCTCTAGTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 72 bp CTTCAATGGTGCGTTCAGAACTACTGGCTGATGTGCTaGCATACTGGCCAGTATCTGCTGAGCTCACTAATG +
Preference number: 6 (lower is better)
Translates to: LQWCVQNYWLMC*HTGQYLLSSLM
Trigger: CATTAGTGAGCTCAGCAGATACTGGCCAGTATGCAAGCACATCAGCCAGTAGTTCTGAACGCACCATTGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 72 bp AGGAGCTATAGTAGCTTGCTGGACTTTTACTCCATCTaGTCCTTGCTGCTGACCGCTCATCCCGCATTAACA +
Preference number: 6 (lower is better)
Translates to: RSYSSLLDFYSI*SLLLTAHPALT
Trigger: TGTTAATGCGGGATGAGCGGTCAGCAGCAAGGACAAGATGGAGTAAAAGTCCAGCAAGCTACTATAGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432066.2
CDS CAA 90 bp GAGGAGTGGAGGCAACAAGTTGCCAAGCGTTTCCAGCAAGTTGCGTaGTTACCAGTTCTAGCTGTTGTGGTTGATTTTGAAGTTGCACCA +
Preference number: 6 (lower is better)
Translates to: EEWRQQVAKRFQQVA*LPVLAVVVDFEVAP
Trigger: TGGTGCAACTTCAAAATCAACCACAACAGCTAGAACTGGTAACAACGCAACTTGCTGGAAACGCTTGGCAACTTGTTGCCTCCACTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 90 bp AACACCAGGTCTAATTTGGACCGGAACTGTCTGATTTGCCAGGTTTaGAGCAAGAATATTCCCAGAAGCTGTCCTGTTAGCAGCTGTGAG +
Preference number: 6 (lower is better)
Translates to: NTRSNLDRNCLICQV*SKNIPRSCPVSSCE
Trigger: CTCACAGCTGCTAACAGGACAGCTTCTGGGAATATTCTTGCTCAAAACCTGGCAAATCAGACAGTTCCGGTCCAAATTAGACCTGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 90 bp TTTGAGATTCTTCAATGGTGCGTTCAGAACTACTGGCTGATGTGCTaGCATACTGGCCAGTATCTGCTGAGCTCACTAATGTGTCACTGC +
Preference number: 6 (lower is better)
Translates to: FEILQWCVQNYWLMC*HTGQYLLSSLMCHC
Trigger: GCAGTGACACATTAGTGAGCTCAGCAGATACTGGCCAGTATGCAAGCACATCAGCCAGTAGTTCTGAACGCACCATTGAAGAATCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 90 bp ATTAGCAATTCCTCCAACTGCTACAGTTACAGGAGCTATAGTAGCTaGCTGGACTTTTACTCCATCTTGTCCTTGCTGCTGACCTGGGAG +
Preference number: 6 (lower is better)
Translates to: ISNSSNCYSYRSYSS*LDFYSILSLLLTWE
Trigger: CTCCCAGGTCAGCAGCAAGGACAAGATGGAGTAAAAGTCCAGCAAGCTACTATAGCTCCTGTAACTGTAGCAGTTGGAGGAATTGCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448246.1
CDS TCA 72 bp GAGCAAGAGTTGTGCCACCACTTGAAGACACTGGGGTaGTGGTTAATTGTTGGGATAACCCAGCATTCTGAA +
Preference number: 6 (lower is better)
Translates to: EQELCHHLKTLG*WLIVGITQHSE
Trigger: TTCAGAATGCTGGGTTATCCCAACAATTAACCATCACCCCAGTGTCTTCAAGTGGTGGCACAACTCTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS GCA 72 bp ATTCTTCAATGGTGCGTTCAGAACTACTGGCTGATGTaGTTGCATACTGGCCAGTATCTGCTGAGCTCACTA +
Preference number: 6 (lower is better)
Translates to: ILQWCVQNYWLM*LHTGQYLLSSL
Trigger: TAGTGAGCTCAGCAGATACTGGCCAGTATGCAAGCACATCAGCCAGTAGTTCTGAACGCACCATTGAAGAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 72 bp TCCTCCAACTGCTACAGTTACAGGAGCTATAGTAGCTaGCTGGACTTTTACTCCATCTTGTCCTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SSNCYSYRSYSS*LDFYSILSLLL
Trigger: CAGCAGCAAGGACAAGATGGAGTAAAAGTCCAGCAAGCTACTATAGCTCCTGTAACTGTAGCAGTTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222584.8
ENST00000432066.2
ENST00000448246.1
ENST00000649633.1
CDS CAA 90 bp ATTAGCAATTCCTCCAACTGCTACAGTTACAGGAGCTATAGTAGCTaGCTGGACTTTTACTCCATCTTGTCCTTGCTGCTGACCTGCAAC +
Preference number: 6 (lower is better)
Translates to: ISNSSNCYSYRSYSS*LDFYSILSLLLTCN
Trigger: GTTGCAGGTCAGCAGCAAGGACAAGATGGAGTAAAAGTCCAGCAAGCTACTATAGCTCCTGTAACTGTAGCAGTTGGAGGAATTGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 90 bp ATTAGCAATTCCTCCAACTGCTACAGTTACAGGAGCTATAGTAGCTaGCTGGACTTTTACTCCATCTTGTCCTTGCTGCTGACCGCTCAT +
Preference number: 6 (lower is better)
Translates to: ISNSSNCYSYRSYSS*LDFYSILSLLLTAH
Trigger: ATGAGCGGTCAGCAGCAAGGACAAGATGGAGTAAAAGTCCAGCAAGCTACTATAGCTCCTGTAACTGTAGCAGTTGGAGGAATTGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432066.2
CDS CAA 72 bp AGGAGCTATAGTAGCTTGCTGGACTTTTACTCCATCTaGTCCTTGCTGCTGACCTGCAACACTAGTGATTGT +
Preference number: 6 (lower is better)
Translates to: RSYSSLLDFYSI*SLLLTCNTSDC
Trigger: ACAATCACTAGTGTTGCAGGTCAGCAGCAAGGACAAGATGGAGTAAAAGTCCAGCAAGCTACTATAGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 72 bp AGGCAACAAGTTGCCAAGCGTTTCCAGCAAGTTGCGTaGTTACCAGTTCTAGCTGTTGTGGTTGATTTTGAA +
Preference number: 6 (lower is better)
Translates to: RQQVAKRFQQVA*LPVLAVVVDFE
Trigger: TTCAAAATCAACCACAACAGCTAGAACTGGTAACAACGCAACTTGCTGGAAACGCTTGGCAACTTGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS TCA 72 bp GGTACTGTACACTACCACTTGGATTTTGTACTTGTATaGCTTGAAATTGACCAGGGGTGGAAGAATTACCTG +
Preference number: 6 (lower is better)
Translates to: GTVHYHLDFVLV*LEIDQGWKNYL
Trigger: CAGGTAATTCTTCCACCCCTGGTCAATTTCAAGTCATACAAGTACAAAATCCAAGTGGTAGTGTACAGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 90 bp CAATCCTTGACTTGGATCTATAATAATTTGTTGTTGTCCAGTTGCTaGATTTTCACCAGGAGTCCCTATTTTGCTGCAAGTAGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: QSLTWIYNNLLLSSC*IFTRSPYFAASSCQ
Trigger: CTGGCAGCTACTTGCAGCAAAATAGGGACTCCTGGTGAAAATCAAGCAACTGGACAACAACAAATTATTATAGATCCAAGTCAAGGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 90 bp AAGAATATTCCCAGAAGCTGTCCTGTTAGCAGCTGTGAGTATAGCTaGATTATTACCTGCAGAAATGAGCTGAATTTGACCCTGCAAATC +
Preference number: 6 (lower is better)
Translates to: KNIPRSCPVSSCEYS*IITCRNELNLTLQI
Trigger: GATTTGCAGGGTCAAATTCAGCTCATTTCTGCAGGTAATAATCAAGCTATACTCACAGCTGCTAACAGGACAGCTTCTGGGAATATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 90 bp CTGAAGTTGTGGAATTACTTGGTACTGTACACTACCACTTGGATTTaGTACTTGTATGACTTGAAATTGACCAGGGGTGGAAGAATTACC +
Preference number: 6 (lower is better)
Translates to: LKLWNYLVLYTTTWI*YLYDLKLTRGGRIT
Trigger: GGTAATTCTTCCACCCCTGGTCAATTTCAAGTCATACAAGTACAAAATCCAAGTGGTAGTGTACAGTACCAAGTAATTCCACAACTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 72 bp TGGAATTACTTGGTACTGTACACTACCACTTGGATTTaGTACTTGTATGACTTGAAATTGACCAGGGGTGGA +
Preference number: 6 (lower is better)
Translates to: WNYLVLYTTTWI*YLYDLKLTRGG
Trigger: TCCACCCCTGGTCAATTTCAAGTCATACAAGTACAAAATCCAAGTGGTAGTGTACAGTACCAAGTAATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 72 bp TTGTTGACCTTCCACTGTCTGAAGTTGTGGAATTACTaGGTACTGTACACTACCACTTGGATTTTGTACTTG +
Preference number: 6 (lower is better)
Translates to: LLTFHCLKLWNY*VLYTTTWILYL
Trigger: CAAGTACAAAATCCAAGTGGTAGTGTACAGTACCAAGTAATTCCACAACTTCAGACAGTGGAAGGTCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 90 bp TTGAAGTTGCACCAATCCTTGACTTGGATCTATAATAATTTGTTGTaGTCCAGTTGCTTGATTTTCACCAGGAGTCCCTATTTTGCTGCA +
Preference number: 6 (lower is better)
Translates to: LKLHQSLTWIYNNLL*SSCLIFTRSPYFAA
Trigger: TGCAGCAAAATAGGGACTCCTGGTGAAAATCAAGCAACTGGACAACAACAAATTATTATAGATCCAAGTCAAGGATTGGTGCAACTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS TCA 72 bp TATGACTTGAAATTGACCAGGGGTGGAAGAATTACCTaGTTTAGTTTTTGTAGGAGATGCACTCCCGTTATT +
Preference number: 6 (lower is better)
Translates to: YDLKLTRGGRIT*FSFCRRCTPVI
Trigger: AATAACGGGAGTGCATCTCCTACAAAAACTAAATCAGGTAATTCTTCCACCCCTGGTCAATTTCAAGTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CCA 72 bp GATTTGAATTTGTTGACCTTCCACTGTCTGAAGTTGTaGAATTACTTGGTACTGTACACTACCACTTGGATT +
Preference number: 6 (lower is better)
Translates to: DLNLLTFHCLKL*NYLVLYTTTWI
Trigger: AATCCAAGTGGTAGTGTACAGTACCAAGTAATTCCACAACTTCAGACAGTGGAAGGTCAACAAATTCAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 72 bp CACCAATCCTTGACTTGGATCTATAATAATTTGTTGTaGTCCAGTTGCTTGATTTTCACCAGGAGTCCCTAT +
Preference number: 6 (lower is better)
Translates to: HQSLTWIYNNLL*SSCLIFTRSPY
Trigger: ATAGGGACTCCTGGTGAAAATCAAGCAACTGGACAACAACAAATTATTATAGATCCAAGTCAAGGATTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 72 bp TACTTGGTACTGTACACTACCACTTGGATTTTGTACTaGTATGACTTGAAATTGACCAGGGGTGGAAGAATT +
Preference number: 6 (lower is better)
Translates to: YLVLYTTTWILY*YDLKLTRGGRI
Trigger: AATTCTTCCACCCCTGGTCAATTTCAAGTCATACAAGTACAAAATCCAAGTGGTAGTGTACAGTACCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 72 bp ATTGATTTGAATTTGTTGACCTTCCACTGTCTGAAGTaGTGGAATTACTTGGTACTGTACACTACCACTTGG +
Preference number: 6 (lower is better)
Translates to: IDLNLLTFHCLK*WNYLVLYTTTW
Trigger: CCAAGTGGTAGTGTACAGTACCAAGTAATTCCACAACTTCAGACAGTGGAAGGTCAACAAATTCAAATCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 90 bp GATTTGAATTTGTTGACCTTCCACTGTCTGAAGTTGTGGAATTACTaGGTACTGTACACTACCACTTGGATTTTGTACTTGTATGACTTG +
Preference number: 6 (lower is better)
Translates to: DLNLLTFHCLKLWNY*VLYTTTWILYLYDL
Trigger: CAAGTCATACAAGTACAAAATCCAAGTGGTAGTGTACAGTACCAAGTAATTCCACAACTTCAGACAGTGGAAGGTCAACAAATTCAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 90 bp ACTAGTTGGATTGATTTGAATTTGTTGACCTTCCACTGTCTGAAGTaGTGGAATTACTTGGTACTGTACACTACCACTTGGATTTTGTAC +
Preference number: 6 (lower is better)
Translates to: TSWIDLNLLTFHCLK*WNYLVLYTTTWILY
Trigger: GTACAAAATCCAAGTGGTAGTGTACAGTACCAAGTAATTCCACAACTTCAGACAGTGGAAGGTCAACAAATTCAAATCAATCCAACTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CCA 72 bp AAGTTGTGGAATTACTTGGTACTGTACACTACCACTTaGATTTTGTACTTGTATGACTTGAAATTGACCAGG +
Preference number: 6 (lower is better)
Translates to: KLWNYLVLYTTT*ILYLYDLKLTR
Trigger: CCTGGTCAATTTCAAGTCATACAAGTACAAAATCCAAGTGGTAGTGTACAGTACCAAGTAATTCCACAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CAA 90 bp TTGATTTTGAAGTTGCACCAATCCTTGACTTGGATCTATAATAATTaGTTGTTGTCCAGTTGCTTGATTTTCACCAGGAGTCCCTATTTT +
Preference number: 6 (lower is better)
Translates to: LILKLHQSLTWIYNN*LLSSCLIFTRSPYF
Trigger: AAAATAGGGACTCCTGGTGAAAATCAAGCAACTGGACAACAACAAATTATTATAGATCCAAGTCAAGGATTGGTGCAACTTCAAAATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1
CDS CCA 72 bp TTGTGGTTGATTTTGAAGTTGCACCAATCCTTGACTTaGATCTATAATAATTTGTTGTTGTCCAGTTGCTTG +
Preference number: 6 (lower is better)
Translates to: LWLILKLHQSLT*IYNNLLLSSCL
Trigger: CAAGCAACTGGACAACAACAAATTATTATAGATCCAAGTCAAGGATTGGTGCAACTTCAAAATCAACCACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222584.8
ENST00000649633.1