RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000167182

Ensembl transcript IDs: ENST00000376741.5, ENST00000613139.1, ENST00000635868.1, ENST00000637314.1, ENST00000637943.1, ENST00000642065.1

Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTaGGGGGAAGGGCCAAGGCAGAGCCAAGGGGCTTCAGAAGGAGGA +
Preference number: 1 (lower is better)
Translates to: GHGQCPQSGQAGSSW*GEGPRQSQGASEGG
Trigger: TCCTCCTTCTGAAGCCCCTTGGCTCTGCCTTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
3UTR CCA 90 bp TTTGGAAATAAGGGTTCCCACGCGTCCTGGTTTAGAACGTCTCATTaGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTG +
Preference number: 1 (lower is better)
Translates to: FGNKGSHASWFRTSH*ARPVSTVWAGRELV
Trigger: CACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCTTATTTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
3UTR CCA 90 bp GGAGTCGGTGGGTGTCTTTACTTTTTAAATAGAGCTGGAATGTGCTaGAGGAGAGGTTGTGGCGGGGCTGGGCACATGGAGTGGAGGTGG +
Preference number: 1 (lower is better)
Translates to: GVGGCLYFLNRAGMC*RRGCGGAGHMEWRW
Trigger: CCACCTCCACTCCATGTGCCCAGCCCCGCCACAACCTCTCCTCCAGCACATTCCAGCTCTATTTAAAAAGTAAAGACACCCACCGACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
3UTR GCA 90 bp TCAGGAGTCGGTGGGTGTCTTTACTTTTTAAATAGAGCTGGAATGTaGTGGAGGAGAGGTTGTGGCGGGGCTGGGCACATGGAGTGGAGG +
Preference number: 1 (lower is better)
Translates to: SGVGGCLYFLNRAGM*WRRGCGGAGHMEWR
Trigger: CCTCCACTCCATGTGCCCAGCCCCGCCACAACCTCTCCTCCAGCACATTCCAGCTCTATTTAAAAAGTAAAGACACCCACCGACTCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
3UTR-3UTR GCA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAAACACAGGTGGGGGACTaGATCTTCAGGGCCTCCCGC +
Preference number: 2 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQTQVGD*IFRASR
Trigger: GCGGGAGGCCCTGAAGATGCAGTCCCCCACCTGTGT...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
3UTR-3UTR CCA 90 bp TCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCAGGGAGGACACAGGTaGGGGACTGCATCTTCAGGG +
Preference number: 2 (lower is better)
Translates to: SWFRTSHWARPVSTVWAGQGGHR*GTASSG
Trigger: CCCTGAAGATGCAGTCCCCCACCTGTGTCCTCCCTG...GCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
3UTR-3UTR CCA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAAGCGGGGCTGGGCACATaGAGTGGAGGTGGCCCCGAG +
Preference number: 2 (lower is better)
Translates to: YAHHCPQPSTESRHQGGEAGLGT*SGGGPE
Trigger: CTCGGGGCCACCTCCACTCCATGTGCCCAGCCCCGC...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376741.5
3UTR-3UTR TCA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAAAGAGGGGGCATGGCATaGCGCGACTCCGGCAGTGTT +
Preference number: 2 (lower is better)
Translates to: YAHHCPQPSTESRHQGGERGGMA*RDSGSV
Trigger: AACACTGCCGGAGTCGCGTCATGCCATGCCCCCTCT...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376741.5
3UTR-3UTR CCA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTCCAGTGTCCACAGTCTaGGCAGGCCGGGAGCTCGTG +
Preference number: 2 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRPVSTV*AGRELV
Trigger: CACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGG...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
3UTR-3UTR CAA 90 bp CGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCTTCCTGTGGGGACAGTaGCAGAACAGGAGTGGGGCT +
Preference number: 3 (lower is better)
Translates to: RPVSTVWAGRELVVRGRAFLWGQ*QNRSGA
Trigger: AGCCCCACTCCTGTTCTGCAACTGTCCCCACAGGAA...GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376741.5
3UTR CCA 72 bp AGAACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTaGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCC +
Preference number: 3 (lower is better)
Translates to: RTSHWARPVSTV*AGRELVVRGRA
Trigger: GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
3UTR CCA 72 bp AAGGGTTCCCACGCGTCCTGGTTTAGAACGTCTCATTaGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGG +
Preference number: 3 (lower is better)
Translates to: KGSHASWFRTSH*ARPVSTVWAGR
Trigger: CCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
3UTR CCA 72 bp TGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTCCTaGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCC +
Preference number: 3 (lower is better)
Translates to: CFSFGNKGSHAS*FRTSHWARPVS
Trigger: GGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCTTATTTCCAAAGGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp CGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCCGACATCTTCCTCCCTaGCCTCCGCCGCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: RPVSTVWAGRELVVRGRARHLPP*PPPPPP
Trigger: CGGCGGAGGCGGCGGAGGCCAGGGAGGAAGATGTCG...GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAACGCTTCTCCCCGGGCTaGGTCTCTCCGGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQRFSPG*VSPARA
Trigger: AGCCCTGGCCGGAGAGACCCAGCCCGGGGAGAAGCG...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp TCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGGACACGTGCAGGCCATaGGGCGCCGCTTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: SHWARPVSTVWAGRELVVDTCRP*GAASPR
Trigger: CCGGGGAGAAGCGGCGCCGCATGGCCTGCACGTGTC...CACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp CGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCACACAGGTGGGGGACTaGATCTTCAGGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RPVSTVWAGRELVVRGRATQVGD*IFRASR
Trigger: GCGGGAGGCCCTGAAGATGCAGTCCCCCACCTGTGT...GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp CGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCCTGGTCCCACTCAGATaGGGAGCACGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: RPVSTVWAGRELVVRGRALVPLR*GARDAG
Trigger: CCCTGCATCCCGTGCTCCCCATCTGAGTGGGACCAG...GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGGCTGCTGCTCGGCCTTaGGGGGCACCACCTGGACCT +
Preference number: 4 (lower is better)
Translates to: SHWARPVSTVWAGRELVVAAARP*GAPPGP
Trigger: AGGTCCAGGTGGTGCCCCCCAAGGCCGAGCAGCAGC...CACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAACCAGTGTCCACAGTCTaGGCAGGCCGGGAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQPVSTV*AGRELV
Trigger: CACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGG...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAAACCACCCGCAGAGCCTaGTGGGGGATCTGTACCACC +
Preference number: 4 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQTTRRA*WGICTT
Trigger: GGTGGTACAGATCCCCCAGCAGGCTCTGCGGGTGGT...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp CGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCACTGTCAGCTGCTGCTaGCCGCCTGTGTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: RPVSTVWAGRELVVRGRATVSCC*PPVLVM
Trigger: CATCACCAACACAGGCGGGCAGCAGCAGCTGACAGT...GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGCTGGGAGTCCTGGGTaGTGGAGGCGGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: NVSLGTASVHSLGRPGARAGSPG*WRRQAA
Trigger: TGCAGCCTGCCGCCTCCACCACCCAGGACTCCCAGC...ACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAACAAGTTTCCGCGGTGTaGGCTGTGGGGGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQQVSAV*AVGEQE
Trigger: CTCCTGCTCCCCCACAGCCCACACCGCGGAAACTTG...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAAACAGCCACAGGGGGCTaGGAGGCAGGAAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQTATGG*EAGRLF
Trigger: GAAGAGCCTTCCTGCCTCCCAGCCCCCTGTGGCTGT...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGACCACCTGGACCTGCTaGACCACAGCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SHWARPVSTVWAGRELVVTTWTC*TTAGWP
Trigger: GGGCCAGCCAGCTGTGGTCCAGCAGGTCCAGGTGGT...CACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp CGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCGCCTCCCGCCGCAGTTaGCCTTACAAGTTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: RPVSTVWAGRELVVRGRAASRRS*PYKFFV
Trigger: CACGAAGAACTTGTAAGGCCAACTGCGGCGGGAGGC...GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAAGAGTTTCTCCAGAGGTaGGTGCCAAGCCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQEFLQR*VPSPRA
Trigger: CGCCCTGGGGCTTGGCACCCACCTCTGGAGAAACTC...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp TCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGAGGGGGCATGGCATaGCGCGACTCCGGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: SHWARPVSTVWAGRELVVRGGMA*RDSGSV
Trigger: AACACTGCCGGAGTCGCGTCATGCCATGCCCCCTCT...CACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAACATTGCCTGGGCAGCTaGCGCCAACTGGGCTGCATT +
Preference number: 4 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQHCLGS*RQLGCI
Trigger: AATGCAGCCCAGTTGGCGGCAGCTGCCCAGGCAATG...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp TCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGTTCTCCAGAGGTGGGTaGCAAGCCCCAGGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SHWARPVSTVWAGRELVVFSRGG*QAPGRP
Trigger: TGGACGCCCTGGGGCTTGGCACCCACCTCTGGAGAA...CACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGTCAGCTTCACCACATTaGCCCCGCTCTGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: SHWARPVSTVWAGRELVVSASPH*PRSARG
Trigger: CCCCCGTGCAGAGCGGGGCCAATGTGGTGAAGCTGA...CACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAAGATGATGCTCCCGGCTaGGGCAATCTTTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQDDAPG*GNLWQG
Trigger: CCCCTGCCAAAGATTGCCCCAGCCGGGAGCATCATC...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp CGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCGGAGGCGCTCAGTTGTaGCCCCTGAATCTGAAGTAT +
Preference number: 4 (lower is better)
Translates to: RPVSTVWAGRELVVRGRAGGAQL*PLNLKY
Trigger: ATACTTCAGATTCAGGGGTCACAACTGAGCGCCTCC...GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp CGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCTATTTCCTGCCTGGATaGTGTTGTCCGCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RPVSTVWAGRELVVRGRAYFLPG*CCPRWS
Trigger: AGACCACCGCGGACAACATCATCCAGGCAGGAAATA...GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp AACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGGATCTGTACCACCTaGTGCTGCTCGGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: NVSLGTASVHSLGRPGARGICTT*CCSALG
Trigger: CCCCAAGGCCGAGCAGCAGCAGGTGGTACAGATCCC...ACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAATGGACAAGGACTGTCTaGACCTCACCGGAAGGCGTG +
Preference number: 4 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQWTRTV*TSPEGV
Trigger: CACGCCTTCCGGTGAGGTGCAGACAGTCCTTGTCCA...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp CGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCACACGTGCTTCTTCTTaGCCTGCTCTCCAGACCTCT +
Preference number: 4 (lower is better)
Translates to: RPVSTVWAGRELVVRGRATRASS*PALQTS
Trigger: AGAGGTCTGGAGAGCAGGGCAAGAAGAAGCACGTGT...GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp TCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCGGCCGCTCGCCAGTGTaGAGGCGCACATGGGCACGC +
Preference number: 4 (lower is better)
Translates to: SWFRTSHWARPVSTVWAGGRSPV*RRTWAR
Trigger: GCGTGCCCATGTGCGCCTGCACACTGGCGAGCGGCC...GCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGGTGCGAGCATGCCGTTaGAGCTCGTCACTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: SHWARPVSTVWAGRELVVVRACR*SSSLRV
Trigger: CACACGGAGTGACGAGCTCCAACGGCATGCTCGCAC...CACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp GGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGGGGACAGTCCAGGGCGTCCACAGTaGCCGGCAGGGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLQKEDNTGNRAPSCGDSPGRPQ*PAGPGR
Trigger: CCTCCCTGGCCCTGCCGGCCACTGTGGACGCCCTGG...ACTGTCCCCACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTAGGTTGTGGCGGGGCTaGGCACATGGAGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: NVSLGTASVHSLGRPGARRLWRG*AHGVEV
Trigger: CACCTCCACTCCATGTGCCCAGCCCCGCCACAACCT...ACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AGGGTTCCCACGCGTCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCAGGGAGTCCTGGGTGGTaGAGGCGGCAGGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: RVPTRPGLERLIGHGQCPGSPGW*RRQAAG
Trigger: ACCTGCAGCCTGCCGCCTCCACCACCCAGGACTCCC...TGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGCTTAGACAGCGGGGTTaGGGGGCTTTCAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SHWARPVSTVWAGRELVVLRQRG*GAFSEE
Trigger: CTCCTCACTGAAAGCCCCCCAACCCCGCTGTCTAAG...CACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp CGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCCTGGAGGGCCAATTTTaGTACATGTTGCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: RPVSTVWAGRELVVRGRALEGQF*YMLQQA
Trigger: TGCTTGCTGCAACATGTAGCAAAATTGGCCCTCCAG...GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGGGGAGGGTGGCAGATaGCGCCTGCACCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCGEGGR*RLHHPQ
Trigger: CTGCGGGTGGTGCAGGCGGCATCTGCCACCCTCCCC...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAAAGGTGTCGGCTCAGCTaGCTGGATCTGAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQRCRLS*LDLKVL
Trigger: CAGAACTTTCAGATCCAGGCAGCTGAGCCGACACCT...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGTGACAGGCACGCCCTaGACCTGGACACCATTGATG +
Preference number: 4 (lower is better)
Translates to: NVSLGTASVHSLGRPGARVTGTP*TWTPLM
Trigger: CATCAATGGTGTCCAGGTCCAGGGCGTGCCTGTCAC...ACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCGCAGGAGAGGGGGCATaGCATGACGCGACTCCGGCA +
Preference number: 4 (lower is better)
Translates to: SWFRTSHWARPVSTVWAGAGEGA*HDATPA
Trigger: TGCCGGAGTCGCGTCATGCCATGCCCCCTCTCCTGC...GCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp CGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCCTGGATATTGGCATTTaGTCGGGTCCCTTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: RPVSTVWAGRELVVRGRALDIGI*SGPFVD
Trigger: ATCAACAAAGGGACCCGATCAAATGCCAATATCCAG...GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp TCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGCCCCCACCAGGGCTCTaGACAATGAGCAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: SHWARPVSTVWAGRELVVPPPGL*TMSRLF
Trigger: AAATAACCTGCTCATTGTTCAGAGCCCTGGTGGGGG...CACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp CGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCTGCTCCTCGACGGAGTaGAATGCATGTTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RPVSTVWAGRELVVRGRACSSTE*NACFSF
Trigger: AAAGGAAAAACATGCATTTCACTCCGTCGAGGAGCA...GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp AGGGTTCCCACGCGTCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCAACATTGGCCCCGCTCTaGACGGGGGTGGTGGTCGTA +
Preference number: 4 (lower is better)
Translates to: RVPTRPGLERLIGHGQCPTLAPL*TGVVVV
Trigger: TACGACCACCACCCCCGTGCAGAGCGGGGCCAATGT...TGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp GGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGGGGACAGTTGCAGTTGGGACACGTaGAGGCCATGCGGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: GLQKEDNTGNRAPSCGDSCSWDT*RPCGAA
Trigger: AGCGGCGCCGCATGGCCTGCACGTGTCCCAACTGCA...ACTGTCCCCACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp AACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTTCTTACGGAACGTCTTaGCACAGTCGGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: NVSLGTASVHSLGRPGARSYGTS*HSRGCG
Trigger: GCCACATCCCCGACTGTGGCAAGACGTTCCGTAAGA...ACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGATGGCTGGGAGTCCTaGGTGGTGGAGGCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCDGWES*VVEAAG
Trigger: GCCTGCCGCCTCCACCACCCAGGACTCCCAGCCATC...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGTCGTACTCGACTTCTaGATGGGGGCTGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: NVSLGTASVHSLGRPGARVVLDF*MGAGLM
Trigger: CATCAAGCCAGCCCCCATCCAGAAGTCGAGTACGAC...ACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTCTGCTGGACCACAGCTaGCTGGCCCCCACCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCLLDHS*LAPTRA
Trigger: AGCCCTGGTGGGGGCCAGCCAGCTGTGGTCCAGCAG...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp TCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCTATTCTTGCCGGGGCTaGGAGGGAGAGGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SWFRTSHWARPVSTVWAGYSCRG*EGEGQV
Trigger: AACCTGCCCCTCTCCCTCTCAGCCCCGGCAAGAATA...GCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp GGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGGGGACAGTATGGGGACAGGCTTGTaGCTGGACGGTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GLQKEDNTGNRAPSCGDSMGTGL*LDGEGV
Trigger: CACCCCCTCACCGTCCAGTCACAAGCCTGTCCCCAT...ACTGTCCCCACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp AGGGTTCCCACGCGTCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACTTTCAGTGAGGAGCTaGGTAGGGGCCCCGGTGTCA +
Preference number: 4 (lower is better)
Translates to: RVPTRPGLERLIGHGQCPLSVRS*VGAPVS
Trigger: TGACACCGGGGCCCCTACTCAGCTCCTCACTGAAAG...TGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAAGCCGGGAGCTCGTGGTaGGGGGAAGGGCCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: YAHHCPQPSTESRHQGGEAGSSW*GEGPRQ
Trigger: CTGCCTTGGCCCTTCCCCTCACCACGAGCTCCCGGC...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp TCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCCCCCAACCCTCAACTaGAAGCAGGCATCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SWFRTSHWARPVSTVWAGPPTLN*KQASGR
Trigger: CCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGG...GCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp AGGGTTCCCACGCGTCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCAATGGGGAGCACGGGATaGAGGGCTGCTACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RVPTRPGLERLIGHGQCPMGSTG*RAATGG
Trigger: ACCACCTGTAGCAGCCCTGCATCCCGTGCTCCCCAT...TGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp TCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCGTGTGGGTGCGAGCATaGCGTTGGAGCTCGTCACTC +
Preference number: 4 (lower is better)
Translates to: SWFRTSHWARPVSTVWAGVWVRA*RWSSSL
Trigger: GAGTGACGAGCTCCAACGGCATGCTCGCACCCACAC...GCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGTTATTTCCTGCCTaGATGATGTTGTCCGCGGTG +
Preference number: 4 (lower is better)
Translates to: SHWARPVSTVWAGRELVVRLFPA*MMLSAV
Trigger: CACCGCGGACAACATCATCCAGGCAGGAAATAACCT...CACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGTTTAGAACGTCTCATTaGGCACGGCCAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: SHWARPVSTVWAGRELVVFRTSH*ARPVST
Trigger: TGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAA...CACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTTCCCACGCGTCCTaGTTTAGAACGTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: NVSLGTASVHSLGRPGARGSHAS*FRTSHW
Trigger: CCAATGAGACGTTCTAAACCAGGACGCGTGGGAACC...ACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp AGGGTTCCCACGCGTCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACTCATGAAGCGCTTCTaGCACTGGGCGCACTCGAAG +
Preference number: 4 (lower is better)
Translates to: RVPTRPGLERLIGHGQCPLMKRF*HWAHSK
Trigger: CTTCGAGTGCGCCCAGTGTCAGAAGCGCTTCATGAG...TGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp TCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCTTCTGCACTGTCAGCTaGTGCTGCCCGCCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: SWFRTSHWARPVSTVWAGFCTVS*CCPPVL
Trigger: CAACACAGGCGGGCAGCAGCAGCTGACAGTGCAGAA...GCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp GGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGGGGACAGTCCCCATCCTTGCAGTTaGGACACGTGCAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: GLQKEDNTGNRAPSCGDSPHPCS*DTCRPC
Trigger: GCATGGCCTGCACGTGTCCCAACTGCAAGGATGGGG...ACTGTCCCCACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGTGTGCAGGCGCACATaGGCACGCAGCAAGGACGTC +
Preference number: 4 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCVCRRT*ARSKDV
Trigger: GACGTCCTTGCTGCGTGCCCATGTGCGCCTGCACAC...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAACGACTCCGGCAGTGTTaGGAGCGGGGATCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: YAHHCPQPSTESRHQGGERLRQC*ERGSGW
Trigger: CCACCCCGATCCCCGCTCCCAACACTGCCGGAGTCG...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp GGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGGGGACAGTGCTGGGCACATGGAGTaGAGGTGGCCCCGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: GLQKEDNTGNRAPSCGDSAGHME*RWPRVS
Trigger: AGAAACTCGGGGCCACCTCCACTCCATGTGCCCAGC...ACTGTCCCCACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTTGGGGCTCAGCCCACTaGTGGTCAGGTTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCWGSAH*WSGCSQ
Trigger: CTGGGAACAACCTGACCATCAGTGGGCTGAGCCCCA...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp GGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGGGGACAGTCAGCAGTGGCAGCCATaGTGGTCTGTGGATCGCTCA +
Preference number: 4 (lower is better)
Translates to: GLQKEDNTGNRAPSCGDSQQWQP*WSVDRS
Trigger: TGAGCGATCCACAGACCAGCATGGCTGCCACTGCTG...ACTGTCCCCACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAAGGCACCACCTGGACCTaGTGGACCACAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: YAHHCPQPSTESRHQGGEGTTWT*WTTAGW
Trigger: CCAGCCAGCTGTGGTCCAGCAGGTCCAGGTGGTGCC...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp GGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGGGGACAGTGTTGATGGTCTGCATTaGCTGGGCAGCTGCCGCCAA +
Preference number: 4 (lower is better)
Translates to: GLQKEDNTGNRAPSCGDSVDGLH*LGSCRQ
Trigger: TTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAAC...ACTGTCCCCACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp TCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGTCATATGCTCATCATTaGCCCCAACCCTCAACTGAA +
Preference number: 4 (lower is better)
Translates to: SHWARPVSTVWAGRELVVSYAHH*PQPSTE
Trigger: TTCAGTTGAGGGTTGGGGGCAATGATGAGCATATGA...CACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp GGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGGGGACAGTGCTGCAGGTAGTCACTaGGACTCACAGCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GLQKEDNTGNRAPSCGDSAAGSH*DSQQQW
Trigger: CCACTGCTGCTGTGAGTCCCAGTGACTACCTGCAGC...ACTGTCCCCACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTCGCTCTGCACGGGGGTaGTGGTCGTACTCGACTTCT +
Preference number: 4 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCRSARG*WSYSTS
Trigger: AGAAGTCGAGTACGACCACCACCCCCGTGCAGAGCG...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTCGTTTGTCCCCTGTGTaGGTGCGAGCATGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCRLSPV*VRACRW
Trigger: CCAACGGCATGCTCGCACCCACACAGGGGACAAACG...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTGCGGGGCTGGGCACATaGAGTGGAGGTGGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRAGLGT*SGGGPE
Trigger: CTCGGGGCCACCTCCACTCCATGTGCCCAGCCCCGC...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp AACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTCTTACAAGTTCTTCGTaGCCAGGTGGGTCTTGTAAT +
Preference number: 4 (lower is better)
Translates to: NVSLGTASVHSLGRPGARLTSSS*PGGSCN
Trigger: ATTACAAGACCCACCTGGTCACGAAGAACTTGTAAG...ACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp TCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCGGTTTGGGAATTGCTTaGCTGAATCTGAGGGACCGC +
Preference number: 4 (lower is better)
Translates to: SWFRTSHWARPVSTVWAGGLGIA*LNLRDR
Trigger: GCGGTCCCTCAGATTCAGGCAAGCAATTCCCAAACC...GCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp TCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCAGCTGAGTGCTTTTTaGTGGTCCCACTCAGATGGG +
Preference number: 4 (lower is better)
Translates to: SWFRTSHWARPVSTVWAGQLSAF*WSHSDG
Trigger: CCCATCTGAGTGGGACCAGCAAAAAGCACTCAGCTG...GCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp GGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGGGGACAGTGGGATGTGGCACACGTaGTTCTTCTTGCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GLQKEDNTGNRAPSCGDSGMWHT*FFLPCS
Trigger: AGAGCAGGGCAAGAAGAAGCACGTGTGCCACATCCC...ACTGTCCCCACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp AACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTTGCAGGATGTGCAGGTaGTGTTATCTGAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: NVSLGTASVHSLGRPGARCRMCR*CYLNPD
Trigger: ATCTGGATTCAGATAACAGCACCTGCACATCCTGCA...ACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCAGTGGCAGCCATGCTaGTCTGTGGATCGCTCATTA +
Preference number: 4 (lower is better)
Translates to: SWFRTSHWARPVSTVWAGQWQPC*SVDRSL
Trigger: TAATGAGCGATCCACAGACCAGCATGGCTGCCACTG...GCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTTCTGCACGGGGGTGGTaGTCGTACTCGACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCSARGW*SYSTSG
Trigger: TCCAGAAGTCGAGTACGACCACCACCCCCGTGCAGA...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAAACCCGCAGAGCCTGCTaGGGGATCTGTACCACCTGC +
Preference number: 4 (lower is better)
Translates to: YAHHCPQPSTESRHQGGETRRAC*GICTTC
Trigger: GCAGGTGGTACAGATCCCCCAGCAGGCTCTGCGGGT...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp AGGGTTCCCACGCGTCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCAATCGGGTCCCTTTGTTaGTCATGGTGGGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: RVPTRPGLERLIGHGQCPIGSLC*SWWDSG
Trigger: TCCAGAATCCCACCATGATCAACAAAGGGACCCGAT...TGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTAGATTGGGCTGTACTTaGATGGTTTGGGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: NVSLGTASVHSLGRPGARRLGCT*MVWELL
Trigger: AAGCAATTCCCAAACCATCCAAGTACAGCCCAATCT...ACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTCCACAGTCGGGGATGTaGCACACGTGCTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCPQSGM*HTCFFL
Trigger: CAAGAAGAAGCACGTGTGCCACATCCCCGACTGTGG...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTGGATGGGGGCTGGCTTaGTGGGGACAGGCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRGWGLA*WGQACD
Trigger: GTCACAAGCCTGTCCCCATCAAGCCAGCCCCCATCC...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AGGGTTCCCACGCGTCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACCTGGTACTGGATATTaGCATTTGATCGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RVPTRPGLERLIGHGQCPPGTGY*HLIGSL
Trigger: AAGGGACCCGATCAAATGCCAATATCCAGTACCAGG...TGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGGGACCGCCTGGTACTaGATATTGGCATTTGATCGG +
Preference number: 4 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCGTAWY*ILAFDR
Trigger: CCGATCAAATGCCAATATCCAGTACCAGGCGGTCCC...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAAAGAGCTGGAATGTGCTaGAGGAGAGGTTGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: YAHHCPQPSTESRHQGGERAGMC*RRGCGG
Trigger: CCCGCCACAACCTCTCCTCCAGCACATTCCAGCTCT...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp AGGGTTCCCACGCGTCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCATTGTCAGCCCAGTGCTaGCCAACAAAGTACGTTAAT +
Preference number: 4 (lower is better)
Translates to: RVPTRPGLERLIGHGQCPLSAQC*PTKYVN
Trigger: ATTAACGTACTTTGTTGGTCAGCACTGGGCTGACAA...TGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp AACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTAAGGCTCTTCTTCCTTaGTTTCTTGTTAGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: NVSLGTASVHSLGRPGARKALLP*FLVSLR
Trigger: TCTAAGACTAACAAGAAAGCAAGGAAGAAGAGCCTT...ACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGAGCAGGTTATTTCCTaGCTGGATGATGTTGTCCGC +
Preference number: 4 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCEQVIS*LDDVVR
Trigger: GCGGACAACATCATCCAGGCAGGAAATAACCTGCTC...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAAAGGGCTTGTTCCATTTaGAGCTGGATCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: YAHHCPQPSTESRHQGGERACSI*SWIWVG
Trigger: CCCCACCCAGATCCAGCTGCAAATGGAACAAGCCCT...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAAGGCACGCCCTGGACCTaGACACCATTGATGTTGATG +
Preference number: 4 (lower is better)
Translates to: YAHHCPQPSTESRHQGGEGTPWT*TPLMLM
Trigger: CATCAACATCAATGGTGTCCAGGTCCAGGGCGTGCC...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTCAGGGAGGACACAGGTaGGGGACTGCATCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRQGGHR*GTASSG
Trigger: CCCTGAAGATGCAGTCCCCCACCTGTGTCCTCCCTG...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAATTGATGTTGATGGTCTaGATTGCCTGGGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: YAHHCPQPSTESRHQGGELMLMV*IAWAAA
Trigger: GGCAGCTGCCCAGGCAATGCAGACCATCAACATCAA...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTAGGAGGTGCAGGATGTaGAGGTGCTGTTATCTGAAT +
Preference number: 4 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCRRCRM*RCCYLN
Trigger: ATTCAGATAACAGCACCTGCACATCCTGCACCTCCT...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp GCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTCCTGGTTTAGAACGTCTGCAGCTGCCGCCAACTaGGCTGCATTCAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: ACFSFGNKGSHASWFRTSAAAAN*AAFRLM
Trigger: CATCAGCCTGAATGCAGCCCAGTTGGCGGCAGCTGC...AGACGTTCTAAACCAGGACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAACACAGCAGCTTCAACTaGTGGAGGGCCAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: YAHHCPQPSTESRHQGGEHSSFN*WRANFA
Trigger: AGCAAAATTGGCCCTCCAGCAGTTGAAGCTGCTGTG...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTTCTTCTCCCCATCCTTaGAGTTGGGACACGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRSSPHP*SWDTCR
Trigger: CCTGCACGTGTCCCAACTGCAAGGATGGGGAGAAGA...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAAATCATGGTGGGATTCTaGATAGCGAACACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: YAHHCPQPSTESRHQGGEIMVGF*IANTSC
Trigger: GCAGCTGGTGTTCGCTATCCAGAATCCCACCATGAT...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTTCGGAGAATTGCAGCTaGGTGCTTTTTGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRSENCS*VLFAGP
Trigger: GGGACCAGCAAAAAGCACTCAGCTGCAATTCTCCGA...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAATGGGCTGTACTTGGATaGTTTGGGAATTGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: YAHHCPQPSTESRHQGGEWAVLG*FGNCLP
Trigger: AGGCAAGCAATTCCCAAACCATCCAAGTACAGCCCA...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR TCA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTTCTGGATCTGGTTGGTaGGATTGGGCTGTACTTGGA +
Preference number: 4 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRSGSGW*DWAVLG
Trigger: TCCAAGTACAGCCCAATCTCACCAACCAGATCCAGA...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTGGGATGATCTGGATCTaGTTGGTGAGATTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRGMIWI*LVRLGC
Trigger: ACAGCCCAATCTCACCAACCAGATCCAGATCATCCC...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTAGAATTGCAGCTGAGTaGTTTTTGCTGGTCCCACTC +
Preference number: 4 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRRIAAE*FLLVPL
Trigger: GAGTGGGACCAGCAAAAAGCACTCAGCTGCAATTCT...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTAGCAGCTTCAACTGCTaGAGGGCCAATTTTGCTACA +
Preference number: 4 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRSSFNC*RANFAT
Trigger: TGTAGCAAAATTGGCCCTCCAGCAGTTGAAGCTGCT...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CCA 90 bp GCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTCCTGGTTTAGAACGTCTGTGCCAGGGATGATCTaGATCTGGTTGGTGAGATTG +
Preference number: 4 (lower is better)
Translates to: ACFSFGNKGSHASWFRTSVPGMI*IWLVRL
Trigger: CAATCTCACCAACCAGATCCAGATCATCCCTGGCAC...AGACGTTCTAAACCAGGACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR GCA 90 bp GCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTCCTGGTTTAGAACGTCTGGATGGTTTGGGAATTaGTTGCCTGAATCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: ACFSFGNKGSHASWFRTSGWFGN*LPESEG
Trigger: TCCCTCAGATTCAGGCAAGCAATTCCCAAACCATCC...AGACGTTCTAAACCAGGACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS TCA 90 bp CATCTTCCTCCCTGGCCTCCGCCGCCTCCGCCGCCACCGAGAGCCTaGCACCGCCCGCCAAGCAACCGCCAATCCCGGAGCCCGCCACCG +
Preference number: 5 (lower is better)
Translates to: HLPPWPPPPPPPPRA*HRPPSNRQSRSPPP
Trigger: CGGTGGCGGGCTCCGGGATTGGCGGTTGCTTGGCGGGCGGTGTCAGGCTCTCGGTGGCGGCGGAGGCGGCGGAGGCCAGGGAGGAAGATG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613139.1
ENST00000637314.1
ENST00000642065.1
CDS GCA 90 bp CAGACCTCTTCTCCCCATCCTTGCAGTTGGGACACGTGCAGGCCATaGGGCGCCGCTTCTCCCCGGGCTGGGTCTCTCCGGCCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: QTSSPHPCSWDTCRP*GAASPRAGSLRPGL
Trigger: AAGCCCTGGCCGGAGAGACCCAGCCCGGGGAGAAGCGGCGCCGCATGGCCTGCACGTGTCCCAACTGCAAGGATGGGGAGAAGAGGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS GCA 90 bp CCTGCTCTCCAGACCTCTTCTCCCCATCCTTGCAGTTGGGACACGTaGAGGCCATGCGGCGCCGCTTCTCCCCGGGCTGGGTCTCTCCGG +
Preference number: 5 (lower is better)
Translates to: PALQTSSPHPCSWDT*RPCGAASPRAGSLR
Trigger: CCGGAGAGACCCAGCCCGGGGAGAAGCGGCGCCGCATGGCCTGCACGTGTCCCAACTGCAAGGATGGGGAGAAGAGGTCTGGAGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CCA 90 bp CAGTTGGGACACGTGCAGGCCATGCGGCGCCGCTTCTCCCCGGGCTaGGTCTCTCCGGCCAGGGCTTGTTCCATTTGCAGCTGGATCTGG +
Preference number: 5 (lower is better)
Translates to: QLGHVQAMRRRFSPG*VSPARACSICSWIW
Trigger: CCAGATCCAGCTGCAAATGGAACAAGCCCTGGCCGGAGAGACCCAGCCCGGGGAGAAGCGGCGCCGCATGGCCTGCACGTGTCCCAACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAAGGCCTCCCGCCGCAGTaGGCCTTACAAGTTCTTCGT +
Preference number: 5 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQGLPPQ*ALQVLR
Trigger: ACGAAGAACTTGTAAGGCCAACTGCGGCGGGAGGCC...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp CGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCATTCCAAAGCTATTCTaGCCGGGGCTGAGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: RPVSTVWAGRELVVRGRAIPKLF*PGLRGR
Trigger: TCTCCCTCTCAGCCCCGGCAAGAATAGCTTTGGAAT...GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAATTCCTGTGGGGACAGTaGCAGAACAGGAGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQFLWGQ*QNRSGA
Trigger: AGCCCCACTCCTGTTCTGCAACTGTCCCCACAGGAA...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAAGTGATGATGGCTTGGTaGGTGCCAGGGATGATCTGG +
Preference number: 5 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQVMMAW*VPGMIW
Trigger: CCAGATCATCCCTGGCACCAACCAAGCCATCATCAC...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp CGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCTGGACACCATTGATGTaGATGGTCTGCATTGCCTGG +
Preference number: 5 (lower is better)
Translates to: RPVSTVWAGRELVVRGRAWTPLM*MVCIAW
Trigger: CCAGGCAATGCAGACCATCAACATCAATGGTGTCCA...GGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp AACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTTCCCCATCCTTGCAGTaGGGACACGTGCAGGCCATG +
Preference number: 5 (lower is better)
Translates to: NVSLGTASVHSLGRPGARSPSLQ*GHVQAM
Trigger: CATGGCCTGCACGTGTCCCAACTGCAAGGATGGGGA...ACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS GCA 90 bp GTGACAGGCACGCCCTGGACCTGGACACCATTGATGTTGATGGTCTaGATTGCCTGGGCAGCTGCCGCCAACTGGGCTGCATTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VTGTPWTWTPLMLMV*IAWAAAANWAAFRL
Trigger: CAGCCTGAATGCAGCCCAGTTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTCCAGGGCGTGCCTGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CCA 90 bp TGCTGCCCGCCTGTGTTGGTGATGGTGACAGGCACGCCCTGGACCTaGACACCATTGATGTTGATGGTCTGCATTGCCTGGGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: CCPPVLVMVTGTPWT*TPLMLMVCIAWAAA
Trigger: GGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTCCAGGGCGTGCCTGTCACCATCACCAACACAGGCGGGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS TCA 90 bp ACCTGGACCTGCTGGACCACAGCTGGCTGGCCCCCACCAGGGCTCTaGACAATGAGCAGGTTATTTCCTGCCTGGATGATGTTGTCCGCG +
Preference number: 5 (lower is better)
Translates to: TWTCWTTAGWPPPGL*TMSRLFPAWMMLSA
Trigger: CGCGGACAACATCATCCAGGCAGGAAATAACCTGCTCATTGTTCAGAGCCCTGGTGGGGGCCAGCCAGCTGTGGTCCAGCAGGTCCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS GCA 90 bp GACCTGGACACCATTGATGTTGATGGTCTGCATTGCCTGGGCAGCTaGCGCCAACTGGGCTGCATTCAGGCTGATGATGCTCCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: DLDTIDVDGLHCLGS*RQLGCIQADDAPGW
Trigger: CCAGCCGGGAGCATCATCAGCCTGAATGCAGCCCAGTTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CCA 90 bp AGCTGCCGCCAACTGGGCTGCATTCAGGCTGATGATGCTCCCGGCTaGGGCAATCTTTGGCAGGGGACGCTCTTTTCGGAGAATTGCAGC +
Preference number: 5 (lower is better)
Translates to: SCRQLGCIQADDAPG*GNLWQGTLFSENCS
Trigger: GCTGCAATTCTCCGAAAAGAGCGTCCCCTGCCAAAGATTGCCCCAGCCGGGAGCATCATCAGCCTGAATGCAGCCCAGTTGGCGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp GCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTGGTGAGGGGAAGGGCCAAGCTCTTTTCGGAGAATaGCAGCTGAGTGCTTTTTGC +
Preference number: 5 (lower is better)
Translates to: ASVHSLGRPGARGEGKGQALFGE*QLSAFC
Trigger: GCAAAAAGCACTCAGCTGCAATTCTCCGAAAAGAGC...TTGGCCCTTCCCCTCACCACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS GCA 90 bp AGGCACGCCCTGGACCTGGACACCATTGATGTTGATGGTCTGCATTaGCTGGGCAGCTGCCGCCAACTGGGCTGCATTCAGGCTGATGAT +
Preference number: 5 (lower is better)
Translates to: RHALDLDTIDVDGLH*LGSCRQLGCIQADD
Trigger: ATCATCAGCCTGAATGCAGCCCAGTTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTCCAGGGCGTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp GGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGGGGACAGTCCTGCCTGGATGATGTaGTCCGCGGTGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: GLQKEDNTGNRAPSCGDSPAWMM*SAVVSI
Trigger: GATCGAGACCACCGCGGACAACATCATCCAGGCAGG...ACTGTCCCCACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp AGGGTTCCCACGCGTCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACTCTTCTCCCCATCCTaGCAGTTGGGACACGTGCAG +
Preference number: 5 (lower is better)
Translates to: RVPTRPGLERLIGHGQCPLFSPS*QLGHVQ
Trigger: CTGCACGTGTCCCAACTGCAAGGATGGGGAGAAGAG...TGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp TCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCGTCTTACGGAACGTCTaGCCACAGTCGGGGATGTGG +
Preference number: 5 (lower is better)
Translates to: SWFRTSHWARPVSTVWAGVLRNV*PQSGMW
Trigger: CCACATCCCCGACTGTGGCAAGACGTTCCGTAAGAC...GCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGCGCACTCGAAGCGTTaGTCCCCTGTGTGGGTGCGA +
Preference number: 5 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCAHSKR*SPVWVR
Trigger: TCGCACCCACACAGGGGACAAACGCTTCGAGTGCGC...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS TCA 90 bp ATTACTTTCTCCTCTCCTCTCCTCAGACTCAGCCATCTGAGGCTGTaGGGACAGCTGGTCCTGCTGTCGTTGGACTGCCCCCTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: ITFSSPLLRLSHLRL*GQLVLLSLDCPLQP
Trigger: TGGCTGGAGGGGGCAGTCCAACGACAGCAGGACCAGCTGTCCTCACAGCCTCAGATGGCTGAGTCTGAGGAGAGGAGAGGAGAAAGTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637943.1
CDS CCA 90 bp CCATTGATGTTGATGGTCTGCATTGCCTGGGCAGCTGCCGCCAACTaGGCTGCATTCAGGCTGATGATGCTCCCGGCTGGGGCAATCTTT +
Preference number: 5 (lower is better)
Translates to: PLMLMVCIAWAAAAN*AAFRLMMLPAGAIF
Trigger: AAAGATTGCCCCAGCCGGGAGCATCATCAGCCTGAATGCAGCCCAGTTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp AACGTCTCATTGGGCACGGCCAGTGTCCACAGTCTGGGCAGGCCGGGAGCTCGTCAATTTTGCTACATGTaGCAGCAAGCAGGGCTAAGG +
Preference number: 5 (lower is better)
Translates to: NVSLGTASVHSLGRPGARQFCYM*QQAGLR
Trigger: CCTTAGCCCTGCTTGCTGCAACATGTAGCAAAATTG...ACGAGCTCCCGGCCTGCCCAGACTGTGGACACTGGCCGTGCCCAATGAGACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CCA 90 bp TCGATCAGCACCGTCTCCACCTGCTCAGCCACAGCCACAGGGGGCTaGGAGGCAGGAAGGCTCTTCTTCCTTGCTTTCTTGTTAGTCTTA +
Preference number: 5 (lower is better)
Translates to: SISTVSTCSATATGG*EAGRLFFLAFLLVL
Trigger: TAAGACTAACAAGAAAGCAAGGAAGAAGAGCCTTCCTGCCTCCCAGCCCCCTGTGGCTGTGGCTGAGCAGGTGGAGACGGTGCTGATCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp AGGGTTCCCACGCGTCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCAGCTGGAGGGCCAATTTaGCTACATGTTGCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: RVPTRPGLERLIGHGQCPAGGPI*LHVAAS
Trigger: GCTTGCTGCAACATGTAGCAAAATTGGCCCTCCAGC...TGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAAAGAGTGAGCGTCACATaGCCGCCCCCACCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: YAHHCPQPSTESRHQGGERVSVT*PPPPVS
Trigger: GCTGACAGGTGGGGGCGGCAATGTGACGCTCACTCT...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTCAGGGCTTGTTCCATTaGCAGCTGGATCTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCQGLFH*QLDLGG
Trigger: CCCACCCAGATCCAGCTGCAAATGGAACAAGCCCTG...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CCA 90 bp TTTCGGAGAATTGCAGCTGAGTGCTTTTTGCTGGTCCCACTCAGATaGGGAGCACGGGATGCAGGGCTGCTACAGGTGGTGTTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: FRRIAAECFLLVPLR*GARDAGLLQVVLEV
Trigger: CACCTCTAACACCACCTGTAGCAGCCCTGCATCCCGTGCTCCCCATCTGAGTGGGACCAGCAAAAAGCACTCAGCTGCAATTCTCCGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CCA 90 bp GACGGTGAGGGGGTGATGATGGCTTGGTTGGTGCCAGGGATGATCTaGATCTGGTTGGTGAGATTGGGCTGTACTTGGATGGTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: DGEGVMMAWLVPGMI*IWLVRLGCTWMVWE
Trigger: TTCCCAAACCATCCAAGTACAGCCCAATCTCACCAACCAGATCCAGATCATCCCTGGCACCAACCAAGCCATCATCACCCCCTCACCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS-3UTR CAA 90 bp AGAGCCAAGGGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTTGGTTTGGGAATTGCTaGCCTGAATCTGAGGGACCG +
Preference number: 5 (lower is better)
Translates to: RAKGLQKEDNTGNRAPSCWFGNC*PESEGP
Trigger: CGGTCCCTCAGATTCAGGCAAGCAATTCCCAAACCA...ACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCCCTTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTGGTGCGAGCATGCCGTaGGAGCTCGTCACTCCGTGT +
Preference number: 5 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRGASMP*ELVTPC
Trigger: ACACGGAGTGACGAGCTCCAACGGCATGCTCGCACC...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp AGGGTTCCCACGCGTCCTGGTTTAGAACGTCTCATTGGGCACGGCCAGTGTCCACTGTACTTGGATGGTTaGGGAATTGCTTGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: RVPTRPGLERLIGHGQCPLYLDG*GIACLN
Trigger: ATTCAGGCAAGCAATTCCCAAACCATCCAAGTACAG...TGGACACTGGCCGTGCCCAATGAGACGTTCTAAACCAGGACGCGTGGGAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp GGGCTTCAGAAGGAGGACAATACAGGGAACAGAGCCCCTTCCTGTGGGGACAGTATGATCTGGATCTGGTaGGTGAGATTGGGCTGTACT +
Preference number: 5 (lower is better)
Translates to: GLQKEDNTGNRAPSCGDSMIWIW*VRLGCT
Trigger: AGTACAGCCCAATCTCACCAACCAGATCCAGATCAT...ACTGTCCCCACAGGAAGGGGCTCTGTTCCCTGTATTGTCCTCCTTCTGAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CCA 90 bp GAGGGGGTGATGATGGCTTGGTTGGTGCCAGGGATGATCTGGATCTaGTTGGTGAGATTGGGCTGTACTTGGATGGTTTGGGAATTGCTT +
Preference number: 5 (lower is better)
Translates to: EGVMMAWLVPGMIWI*LVRLGCTWMVWELL
Trigger: AAGCAATTCCCAAACCATCCAAGTACAGCCCAATCTCACCAACCAGATCCAGATCATCCCTGGCACCAACCAAGCCATCATCACCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS-3UTR CAA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTGGGAGAGGGGCAGGTTaGATAGGGACAAGTTTCCGC +
Preference number: 5 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRGRGAG*IGTSFR
Trigger: GCGGAAACTTGTCCCTATCAAACCTGCCCCTCTCCC...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS TCA 90 bp GCTTGCCTGAATCTGAGGGACCGCCTGGTACTGGATATTGGCATTTaGTCGGGTCCCTTTGTTGATCATGGTGGGATTCTGGATAGCGAA +
Preference number: 5 (lower is better)
Translates to: ACLNLRDRLVLDIGI*SGPFVDHGGILDSE
Trigger: TTCGCTATCCAGAATCCCACCATGATCAACAAAGGGACCCGATCAAATGCCAATATCCAGTACCAGGCGGTCCCTCAGATTCAGGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS-3UTR CAA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTGCAGCTGAGTGCTTTTaGCTGGTCCCACTCAGATGG +
Preference number: 5 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRAAECF*LVPLRW
Trigger: CCATCTGAGTGGGACCAGCAAAAAGCACTCAGCTGC...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAACCACTGATGGTCAGGTaGTTCCCAGAAACATTCTGC +
Preference number: 5 (lower is better)
Translates to: YAHHCPQPSTESRHQGGEPLMVR*FPETFC
Trigger: GCAGAATGTTTCTGGGAACAACCTGACCATCAGTGG...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTGATCGGGTCCCTTTGTaGATCATGGTGGGATTCTGG +
Preference number: 5 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRDRVPL*IMVGFW
Trigger: CCAGAATCCCACCATGATCAACAAAGGGACCCGATC...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAATTTGATCGGGTCCCTTaGTTGATCATGGTGGGATTC +
Preference number: 5 (lower is better)
Translates to: YAHHCPQPSTESRHQGGEFDRVP*LIMVGF
Trigger: GAATCCCACCATGATCAACAAAGGGACCCGATCAAA...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp TATGCTCATCATTGCCCCCAACCCTCAACTGAAAGCAGGCATCAGGGAGGTGAAGAGATTGGGCTGTACTaGGATGGTTTGGGAATTGCT +
Preference number: 5 (lower is better)
Translates to: YAHHCPQPSTESRHQGGEEIGLY*DGLGIA
Trigger: AGCAATTCCCAAACCATCCAAGTACAGCCCAATCTC...TTCACCTCCCTGATGCCTGCTTTCAGTTGAGGGTTGGGGGCAATGATGAGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp GCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTCCTGGTTTAGAACGTCTGCCTGGTACTGGATATaGGCATTTGATCGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: ACFSFGNKGSHASWFRTSAWYWI*AFDRVP
Trigger: AGGGACCCGATCAAATGCCAATATCCAGTACCAGGC...AGACGTTCTAAACCAGGACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp CCTCGACGGAGTGAAATGCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTTGGACCTGGACACCATaGATGTTGATGGTCTGCATT +
Preference number: 5 (lower is better)
Translates to: PRRSEMHVFPLEIRVPTRWTWTP*MLMVCI
Trigger: AATGCAGACCATCAACATCAATGGTGTCCAGGTCCA...ACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGCATTTCACTCCGTCGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp GCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTCCTGGTTTAGAACGTCTATCTGGTTGGTGAGATaGGGCTGTACTTGGATGGTT +
Preference number: 5 (lower is better)
Translates to: ACFSFGNKGSHASWFRTSIWLVR*GCTWMV
Trigger: AACCATCCAAGTACAGCCCAATCTCACCAACCAGAT...AGACGTTCTAAACCAGGACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS-3UTR CAA 90 bp GCATGTTTTTCCTTTGGAAATAAGGGTTCCCACGCGTCCTGGTTTAGAACGTCTTTCTTCCTTGCTTTCTaGTTAGTCTTAGACAGCGGG +
Preference number: 5 (lower is better)
Translates to: ACFSFGNKGSHASWFRTSFFLAF*LVLDSG
Trigger: CCCGCTGTCTAAGACTAACAAGAAAGCAAGGAAGAA...AGACGTTCTAAACCAGGACGCGTGGGAACCCTTATTTCCAAAGGAAAAACATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS GCA 72 bp AGGGTGGCAGATGCCGCCTGCACCACCCGCAGAGCCTaGTGGGGGATCTGTACCACCTGCTGCTGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: RVADAACTTRRA*WGICTTCCCSA
Trigger: GGCCGAGCAGCAGCAGGTGGTACAGATCCCCCAGCAGGCTCTGCGGGTGGTGCAGGCGGCATCTGCCACCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CCA 72 bp CACGTGCAGGCCATGCGGCGCCGCTTCTCCCCGGGCTaGGTCTCTCCGGCCAGGGCTTGTTCCATTTGCAGC +
Preference number: 6 (lower is better)
Translates to: HVQAMRRRFSPG*VSPARACSICS
Trigger: GCTGCAAATGGAACAAGCCCTGGCCGGAGAGACCCAGCCCGGGGAGAAGCGGCGCCGCATGGCCTGCACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS GCA 72 bp CAGACCTCTTCTCCCCATCCTTGCAGTTGGGACACGTaGAGGCCATGCGGCGCCGCTTCTCCCCGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: QTSSPHPCSWDT*RPCGAASPRAG
Trigger: CCCAGCCCGGGGAGAAGCGGCGCCGCATGGCCTGCACGTGTCCCAACTGCAAGGATGGGGAGAAGAGGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CCA 72 bp CCTGCTCTCCAGACCTCTTCTCCCCATCCTTGCAGTTaGGACACGTGCAGGCCATGCGGCGCCGCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: PALQTSSPHPCS*DTCRPCGAASP
Trigger: GGGAGAAGCGGCGCCGCATGGCCTGCACGTGTCCCAACTGCAAGGATGGGGAGAAGAGGTCTGGAGAGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CAA 72 bp CCCTGCTCTCCAGACCTCTTCTCCCCATCCTTGCAGTaGGGACACGTGCAGGCCATGCGGCGCCGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: PCSPDLFSPSLQ*GHVQAMRRRFS
Trigger: GGAGAAGCGGCGCCGCATGGCCTGCACGTGTCCCAACTGCAAGGATGGGGAGAAGAGGTCTGGAGAGCAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS GCA 72 bp TCTTGCCCTGCTCTCCAGACCTCTTCTCCCCATCCTTaGAGTTGGGACACGTGCAGGCCATGCGGCGCCGCT +
Preference number: 6 (lower is better)
Translates to: SCPALQTSSPHP*SWDTCRPCGAA
Trigger: AGCGGCGCCGCATGGCCTGCACGTGTCCCAACTGCAAGGATGGGGAGAAGAGGTCTGGAGAGCAGGGCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CCA 72 bp TTGATGGTCTGCATTGCCTGGGCAGCTGCCGCCAACTaGGCTGCATTCAGGCTGATGATGCTCCCGGCTGGG +
Preference number: 6 (lower is better)
Translates to: LMVCIAWAAAAN*AAFRLMMLPAG
Trigger: CCCAGCCGGGAGCATCATCAGCCTGAATGCAGCCCAGTTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CAA 90 bp TCACTGGCGTTCACAAGGTTGTTGACGGGCAGAGTGAGCGTCACATaGCCGCCCCCACCTGTCAGCTTCACCACATTGGCCCCGCTCTGC +
Preference number: 6 (lower is better)
Translates to: SLAFTRLLTGRVSVT*PPPPVSFTTLAPLC
Trigger: GCAGAGCGGGGCCAATGTGGTGAAGCTGACAGGTGGGGGCGGCAATGTGACGCTCACTCTGCCCGTCAACAACCTTGTGAACGCCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS GCA 72 bp ACGCCCTGGACCTGGACACCATTGATGTTGATGGTCTaGATTGCCTGGGCAGCTGCCGCCAACTGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: TPWTWTPLMLMV*IAWAAAANWAA
Trigger: TGCAGCCCAGTTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTCCAGGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CCA 72 bp GTGGGGGACTGCATCTTCAGGGCCTCCCGCCGCAGTTaGCCTTACAAGTTCTTCGTGACCAGGTGGGTCTTG +
Preference number: 6 (lower is better)
Translates to: VGDCIFRASRRS*PYKFFVTRWVL
Trigger: CAAGACCCACCTGGTCACGAAGAACTTGTAAGGCCAACTGCGGCGGGAGGCCCTGAAGATGCAGTCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CAA 72 bp GTGACAGGCACGCCCTGGACCTGGACACCATTGATGTaGATGGTCTGCATTGCCTGGGCAGCTGCCGCCAAC +
Preference number: 6 (lower is better)
Translates to: VTGTPWTWTPLM*MVCIAWAAAAN
Trigger: GTTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTCCAGGGCGTGCCTGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CAA 72 bp GGTGGGGGACTGCATCTTCAGGGCCTCCCGCCGCAGTaGGCCTTACAAGTTCTTCGTGACCAGGTGGGTCTT +
Preference number: 6 (lower is better)
Translates to: GGGLHLQGLPPQ*ALQVLRDQVGL
Trigger: AAGACCCACCTGGTCACGAAGAACTTGTAAGGCCAACTGCGGCGGGAGGCCCTGAAGATGCAGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CAA 90 bp TTGGTGATGGTGACAGGCACGCCCTGGACCTGGACACCATTGATGTaGATGGTCTGCATTGCCTGGGCAGCTGCCGCCAACTGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: LVMVTGTPWTWTPLM*MVCIAWAAAANWAA
Trigger: TGCAGCCCAGTTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTCCAGGGCGTGCCTGTCACCATCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS GCA 72 bp CGTGCGGATGTAGACCTGAGTAGGTGTCGGCTCAGCTaGCTGGATCTGAAAGTTCTGGGAGGGCTTCTGGGG +
Preference number: 6 (lower is better)
Translates to: RADVDLSRCRLS*LDLKVLGGLLG
Trigger: CCCCAGAAGCCCTCCCAGAACTTTCAGATCCAGGCAGCTGAGCCGACACCTACTCAGGTCTACATCCGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CAA 72 bp GTGATGGTGACAGGCACGCCCTGGACCTGGACACCATaGATGTTGATGGTCTGCATTGCCTGGGCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: VMVTGTPWTWTP*MLMVCIAWAAA
Trigger: GGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTCCAGGGCGTGCCTGTCACCATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CAA 90 bp GAGGACACAGGTGGGGGACTGCATCTTCAGGGCCTCCCGCCGCAGTaGGCCTTACAAGTTCTTCGTGACCAGGTGGGTCTTGTAATGCTT +
Preference number: 6 (lower is better)
Translates to: EDTGGGLHLQGLPPQ*ALQVLRDQVGLVML
Trigger: AAGCATTACAAGACCCACCTGGTCACGAAGAACTTGTAAGGCCAACTGCGGCGGGAGGCCCTGAAGATGCAGTCCCCCACCTGTGTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS TCA 72 bp TGCTGGACCACAGCTGGCTGGCCCCCACCAGGGCTCTaGACAATGAGCAGGTTATTTCCTGCCTGGATGATG +
Preference number: 6 (lower is better)
Translates to: CWTTAGWPPPGL*TMSRLFPAWMM
Trigger: CATCATCCAGGCAGGAAATAACCTGCTCATTGTTCAGAGCCCTGGTGGGGGCCAGCCAGCTGTGGTCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS GCA 72 bp CTGGACCTGGACACCATTGATGTTGATGGTCTGCATTaGCTGGGCAGCTGCCGCCAACTGGGCTGCATTCAG +
Preference number: 6 (lower is better)
Translates to: LDLDTIDVDGLH*LGSCRQLGCIQ
Trigger: CTGAATGCAGCCCAGTTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CCA 72 bp ATTGCAGCTGAGTGCTTTTTGCTGGTCCCACTCAGATaGGGAGCACGGGATGCAGGGCTGCTACAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: IAAECFLLVPLR*GARDAGLLQVV
Trigger: CACCACCTGTAGCAGCCCTGCATCCCGTGCTCCCCATCTGAGTGGGACCAGCAAAAAGCACTCAGCTGCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CAA 72 bp TTCACAAGGTTGTTGACGGGCAGAGTGAGCGTCACATaGCCGCCCCCACCTGTCAGCTTCACCACATTGGCC +
Preference number: 6 (lower is better)
Translates to: FTRLLTGRVSVT*PPPPVSFTTLA
Trigger: GGCCAATGTGGTGAAGCTGACAGGTGGGGGCGGCAATGTGACGCTCACTCTGCCCGTCAACAACCTTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS CCA 72 bp AGTCACTGGGACTCACAGCAGCAGTGGCAGCCATGCTaGTCTGTGGATCGCTCATTACGACATCTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: SHWDSQQQWQPC*SVDRSLRHLPP
Trigger: GGGAGGAAGATGTCGTAATGAGCGATCCACAGACCAGCATGGCTGCCACTGCTGCTGTGAGTCCCAGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS CCA 72 bp CCTGTGTTGGTGATGGTGACAGGCACGCCCTGGACCTaGACACCATTGATGTTGATGGTCTGCATTGCCTGG +
Preference number: 6 (lower is better)
Translates to: PVLVMVTGTPWT*TPLMLMVCIAW
Trigger: CCAGGCAATGCAGACCATCAACATCAATGGTGTCCAGGTCCAGGGCGTGCCTGTCACCATCACCAACACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CCA 72 bp TGCCCGCCTGTGTTGGTGATGGTGACAGGCACGCCCTaGACCTGGACACCATTGATGTTGATGGTCTGCATT +
Preference number: 6 (lower is better)
Translates to: CPPVLVMVTGTP*TWTPLMLMVCI
Trigger: AATGCAGACCATCAACATCAATGGTGTCCAGGTCCAGGGCGTGCCTGTCACCATCACCAACACAGGCGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CCA 72 bp AGTCACTGGGACTCACAGCAGCAGTGGCAGCCATGCTaGTCTGTGGATCCACCCTGGGTTGATAGCCTTACA +
Preference number: 6 (lower is better)
Translates to: SHWDSQQQWQPC*SVDPPWVDSLT
Trigger: TGTAAGGCTATCAACCCAGGGTGGATCCACAGACCAGCATGGCTGCCACTGCTGCTGTGAGTCCCAGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637943.1
CDS GCA 72 bp ACCATTGATGTTGATGGTCTGCATTGCCTGGGCAGCTaGCGCCAACTGGGCTGCATTCAGGCTGATGATGCT +
Preference number: 6 (lower is better)
Translates to: TIDVDGLHCLGS*RQLGCIQADDA
Trigger: AGCATCATCAGCCTGAATGCAGCCCAGTTGGCGGCAGCTGCCCAGGCAATGCAGACCATCAACATCAATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376741.5
CDS CAA 90 bp GGGACCGCCTGGTACTGGATATTGGCATTTGATCGGGTCCCTTTGTaGATCATGGTGGGATTCTGGATAGCGAACACCAGCTGCCCTCCA +
Preference number: 6 (lower is better)
Translates to: GTAWYWILAFDRVPL*IMVGFWIANTSCPP
Trigger: TGGAGGGCAGCTGGTGTTCGCTATCCAGAATCCCACCATGATCAACAAAGGGACCCGATCAAATGCCAATATCCAGTACCAGGCGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS CAA 90 bp GGTGCCAGGGATGATCTGGATCTGGTTGGTGAGATTGGGCTGTACTaGGATGGTTTGGGAATTGCTTGCCTGAATCTGAGGGACCGCCTG +
Preference number: 6 (lower is better)
Translates to: GARDDLDLVGEIGLY*DGLGIACLNLRDRL
Trigger: CAGGCGGTCCCTCAGATTCAGGCAAGCAATTCCCAAACCATCCAAGTACAGCCCAATCTCACCAACCAGATCCAGATCATCCCTGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS GCA 72 bp AACCCGGGAGGCGGATTTTGCAATGAGCCAAGATCGTaGCACTGTACTCCAGCCGCTCATTACGACATCTTC +
Preference number: 6 (lower is better)
Translates to: NPGGGFCNEPRS*HCTPAAHYDIF
Trigger: GAAGATGTCGTAATGAGCGGCTGGAGTACAGTGGCACGATCTTGGCTCATTGCAAAATCCGCCTCCCGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635868.1
CDS CCA 72 bp AGTCACTGGGACTCACAGCAGCAGTGGCAGCCATGCTaGTCTGTGGATCAATCGTCCCAGCCAATGATAATC +
Preference number: 6 (lower is better)
Translates to: SHWDSQQQWQPC*SVDQSSQPMII
Trigger: GATTATCATTGGCTGGGACGATTGATCCACAGACCAGCATGGCTGCCACTGCTGCTGTGAGTCCCAGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637314.1
CDS CAA 90 bp GGGGTGATGATGGCTTGGTTGGTGCCAGGGATGATCTGGATCTGGTaGGTGAGATTGGGCTGTACTTGGATGGTTTGGGAATTGCTTGCC +
Preference number: 6 (lower is better)
Translates to: GVMMAWLVPGMIWIW*VRLGCTWMVWELLA
Trigger: GGCAAGCAATTCCCAAACCATCCAAGTACAGCCCAATCTCACCAACCAGATCCAGATCATCCCTGGCACCAACCAAGCCATCATCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS GCA 72 bp GTGTCACAGCAGCTTCAACTGCTGGAGGGCCAATTTTaGTACATGTTGCAGCAAGCAGGGCTAAGGGAGATG +
Preference number: 6 (lower is better)
Translates to: VSQQLQLLEGQF*YMLQQAGLREM
Trigger: CATCTCCCTTAGCCCTGCTTGCTGCAACATGTAGCAAAATTGGCCCTCCAGCAGTTGAAGCTGCTGTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376741.5
ENST00000613139.1
ENST00000637314.1
ENST00000637943.1
CDS CCA 72 bp AGTCACTGGGACTCACAGCAGCAGTGGCAGCCATGCTaGTCTGTGGATCTAAATGAGATTCTGACTGTGTGG +
Preference number: 6 (lower is better)
Translates to: SHWDSQQQWQPC*SVDLNEILTVW
Trigger: CCACACAGTCAGAATCTCATTTAGATCCACAGACCAGCATGGCTGCCACTGCTGCTGTGAGTCCCAGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635868.1
CDS CAA 72 bp GATCTGGTTGGTGAGATTGGGCTGTACTTGGATGGTTaGGGAATTGCTTGCCTGAATCTGAGGGACCGCCTG +
Preference number: 6 (lower is better)
Translates to: DLVGEIGLYLDG*GIACLNLRDRL
Trigger: CAGGCGGTCCCTCAGATTCAGGCAAGCAATTCCCAAACCATCCAAGTACAGCCCAATCTCACCAACCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS CAA 90 bp GATGATCTGGATCTGGTTGGTGAGATTGGGCTGTACTTGGATGGTTaGGGAATTGCTTGCCTGAATCTGAGGGACCGCCTGGTACTGGAT +
Preference number: 6 (lower is better)
Translates to: DDLDLVGEIGLYLDG*GIACLNLRDRLVLD
Trigger: ATCCAGTACCAGGCGGTCCCTCAGATTCAGGCAAGCAATTCCCAAACCATCCAAGTACAGCCCAATCTCACCAACCAGATCCAGATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS CCA 72 bp ATGATGGCTTGGTTGGTGCCAGGGATGATCTGGATCTaGTTGGTGAGATTGGGCTGTACTTGGATGGTTTGG +
Preference number: 6 (lower is better)
Translates to: MMAWLVPGMIWI*LVRLGCTWMVW
Trigger: CCAAACCATCCAAGTACAGCCCAATCTCACCAACCAGATCCAGATCATCCCTGGCACCAACCAAGCCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS CAA 72 bp TTGGTGCCAGGGATGATCTGGATCTGGTTGGTGAGATaGGGCTGTACTTGGATGGTTTGGGAATTGCTTGCC +
Preference number: 6 (lower is better)
Translates to: LVPGMIWIWLVR*GCTWMVWELLA
Trigger: GGCAAGCAATTCCCAAACCATCCAAGTACAGCCCAATCTCACCAACCAGATCCAGATCATCCCTGGCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS CAA 72 bp ATGGCTTGGTTGGTGCCAGGGATGATCTGGATCTGGTaGGTGAGATTGGGCTGTACTTGGATGGTTTGGGAA +
Preference number: 6 (lower is better)
Translates to: MAWLVPGMIWIW*VRLGCTWMVWE
Trigger: TTCCCAAACCATCCAAGTACAGCCCAATCTCACCAACCAGATCCAGATCATCCCTGGCACCAACCAAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS TCA 72 bp AATCTGAGGGACCGCCTGGTACTGGATATTGGCATTTaGTCGGGTCCCTTTGTTGATCATGGTGGGATTCTG +
Preference number: 6 (lower is better)
Translates to: NLRDRLVLDIGI*SGPFVDHGGIL
Trigger: CAGAATCCCACCATGATCAACAAAGGGACCCGATCAAATGCCAATATCCAGTACCAGGCGGTCCCTCAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS GCA 72 bp GAGATTGGGCTGTACTTGGATGGTTTGGGAATTGCTTaGCTGAATCTGAGGGACCGCCTGGTACTGGATATT +
Preference number: 6 (lower is better)
Translates to: EIGLYLDGLGIA*LNLRDRLVLDI
Trigger: AATATCCAGTACCAGGCGGTCCCTCAGATTCAGGCAAGCAATTCCCAAACCATCCAAGTACAGCCCAATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS CAA 72 bp GCCTGGTACTGGATATTGGCATTTGATCGGGTCCCTTaGTTGATCATGGTGGGATTCTGGATAGCGAACACC +
Preference number: 6 (lower is better)
Translates to: AWYWILAFDRVP*LIMVGFWIANT
Trigger: GGTGTTCGCTATCCAGAATCCCACCATGATCAACAAAGGGACCCGATCAAATGCCAATATCCAGTACCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS CCA 72 bp TGCTGGTCTGTGGATCTAAATGAGATTCTGACTGTGTaGTTCATTAGTGGGATGGTCCCTCTTAGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: CWSVDLNEILTV*FISGMVPLSLL
Trigger: GAGGAGGCTAAGAGGGACCATCCCACTAATGAACCACACAGTCAGAATCTCATTTAGATCCACAGACCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635868.1
CDS CAA 72 bp TGGTACTGGATATTGGCATTTGATCGGGTCCCTTTGTaGATCATGGTGGGATTCTGGATAGCGAACACCAGC +
Preference number: 6 (lower is better)
Translates to: WYWILAFDRVPL*IMVGFWIANTS
Trigger: GCTGGTGTTCGCTATCCAGAATCCCACCATGATCAACAAAGGGACCCGATCAAATGCCAATATCCAGTACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS CAA 72 bp GATGATCTGGATCTGGTTGGTGAGATTGGGCTGTACTaGGATGGTTTGGGAATTGCTTGCCTGAATCTGAGG +
Preference number: 6 (lower is better)
Translates to: DDLDLVGEIGLY*DGLGIACLNLR
Trigger: CCTCAGATTCAGGCAAGCAATTCCCAAACCATCCAAGTACAGCCCAATCTCACCAACCAGATCCAGATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376741.5
ENST00000613139.1
CDS CAA 72 bp CACTGGAACACTGACATCATCAGCCCAATTGATAGGTaGTCTGATAGATTCGCCCCCGCTCATTACGACATC +
Preference number: 6 (lower is better)
Translates to: HWNTDIISPIDR*SDRFAPAHYDI
Trigger: GATGTCGTAATGAGCGGGGGCGAATCTATCAGACAACCTATCAATTGGGCTGATGATGTCAGTGTTCCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637314.1
ENST00000637943.1
CDS CAA 72 bp TTAGAAGCCACTGGAACACTGACATCATCAGCCCAATaGATAGGTTGTCTGATAGATTCGCCCCCGCTCATT +
Preference number: 6 (lower is better)
Translates to: LEATGTLTSSAQ*IGCLIDSPPLI
Trigger: AATGAGCGGGGGCGAATCTATCAGACAACCTATCAATTGGGCTGATGATGTCAGTGTTCCAGTGGCTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637314.1
ENST00000637943.1
CDS CCA 72 bp CATTTCCAACAGGTATTAACGCCTGTTAGAAGCCACTaGAACACTGACATCATCAGCCCAATTGATAGGTTG +
Preference number: 6 (lower is better)
Translates to: HFQQVLTPVRSH*NTDIISPIDRL
Trigger: CAACCTATCAATTGGGCTGATGATGTCAGTGTTCCAGTGGCTTCTAACAGGCGTTAATACCTGTTGGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637314.1
ENST00000637943.1