RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SP110 (Homo sapiens)

Ensembl gene IDs: ENSG00000135899

Ensembl transcript IDs: ENST00000258381.11, ENST00000258382.10, ENST00000358662.9, ENST00000392048.7, ENST00000409815.6, ENST00000455674.2, ENST00000462232.1, ENST00000463022.1, ENST00000477068.1, ENST00000480916.1, ENST00000483067.1, ENST00000486146.2, ENST00000489597.1, ENST00000490880.5, ENST00000540870.5

Found 569 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGCTTTCACCAATAGATTGTGGCAGAAGTGACAGTGTGCAAGTATaGATGGGGTCTGCCAGTACCATGTGGAGCAAAGGGAAGCATCCT +
Preference number: 1 (lower is better)
Translates to: LLSPIDCGRSDSVQV*MGSASTMWSKGKHP
Trigger: AGGATGCTTCCCTTTGCTCCACATGGTACTGGCAGACCCCATTCATACTTGCACACTGTCACTTCTGCCACAATCTATTGGTGAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR CCA 90 bp AATGGGGTCTGCCAGTACCATGTGGAGCAAAGGGAAGCATCCTCATaGATGATGCCTGAATTCTTGATCCACAGAATAGTGAGCAATAAA +
Preference number: 1 (lower is better)
Translates to: NGVCQYHVEQREASS*MMPEFLIHRIVSNK
Trigger: TTTATTGCTCACTATTCTGTGGATCAAGAATTCAGGCATCATCCATGAGGATGCTTCCCTTTGCTCCACATGGTACTGGCAGACCCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR TCA 90 bp AGGGACAGGAGAGCCAAATGCAGTGTGTGGAACTTGTTTAGATCCTaGTTTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGG +
Preference number: 1 (lower is better)
Translates to: RDRRAKCSVWNLFRS*FEQINSKKTYETVG
Trigger: CCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAAATCAGGATCTAAACAAGTTCCACACACTGCATTTGGCTCTCCTGTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR CCA 90 bp AAAGACACACTTCAGTTGACTGAAAGGCAGAGCAAAAAGGAAGTATaGAGAAGTCGTGTCAAGAAAAGACCAGCAGGGAATCTTAAACAG +
Preference number: 1 (lower is better)
Translates to: KDTLQLTERQSKKEV*RSRVKKRPAGNLKQ
Trigger: CTGTTTAAGATTCCCTGCTGGTCTTTTCTTGACACGACTTCTCCATACTTCCTTTTTGCTCTGCCTTTCAGTCAACTGAAGTGTGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACAGGGTCCCATCAGCTaGATCCTGAGGTGGGGATGC +
Preference number: 2 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKQGPIS*ILRWGC
Trigger: GCATCCCCACCTCAGGATTCAGCTGATGGGACCCTG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACAGGGTCCCATCAGCTaGATCCTGAGGTGGGGATGC +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALQGPIS*ILRWGC
Trigger: GCATCCCCACCTCAGGATTCAGCTGATGGGACCCTG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR GCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCAGACAGGGAAAGTCTaGAACATGGTGACTGAGAGG +
Preference number: 2 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKQTGKV*NMVTER
Trigger: CCTCTCAGTCACCATGTTGCAGACTTTCCCTGTCTG...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
3UTR-3UTR GCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAGCTCACTGCGACCTCTaGCTCCCAGGCTCATCCTTC +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALAHCDL*LPGSSF
Trigger: GAAGGATGAGCCTGGGAGGCAGAGGTCGCAGTGAGC...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR GCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAACAGGCCTGAGCCACTaGGCCTGGCAGACCACCTAT +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALTGLSH*AWQTTY
Trigger: ATAGGTGGTCTGCCAGGCGCAGTGGCTCAGGCCTGT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR GCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGGCAGGAGAATCGCTTaGACCCAGGAGGAGGAGGTT +
Preference number: 2 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKGRRIA*TQEEEV
Trigger: AACCTCCTCCTCCTGGGTGCAAGCGATTCTCCTGCC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR GCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACTCAAGCGATCCACCTaGCTCGGCCTCCTAAAGTGC +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLKRST*LGLLKC
Trigger: GCACTTTAGGAGGCCGAGGCAGGTGGATCGCTTGAG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR CAA 90 bp AAGAATAAAGATGGAGGGTGTGATAATCCTATGAAGTGTCTGGGTTaGGGTCCTGAGGGCAGCCAATTACATCCCAGACTCACTGGCAAT +
Preference number: 2 (lower is better)
Translates to: KNKDGGCDNPMKCLG*GPEGSQLHPRLTGN
Trigger: ATTGCCAGTGAGTCTGGGATGTAATTGGCTGCCCTCAGGACCCAAACCCAGACACTTCATAGGATTATCACACCCTCCATCTTTATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACCATCAGCTGAATCCTaGGGTGGGGATGCTTCAGTC +
Preference number: 2 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKPSAES*GGDASV
Trigger: GACTGAAGCATCCCCACCTCAGGATTCAGCTGATGG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATCTGGGTTTGGGTCCTaGGGGCAGCCAATTACATCC +
Preference number: 2 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKSGFGS*GQPITS
Trigger: GGATGTAATTGGCTGCCCTCAGGACCCAAACCCAGA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR CAA 90 bp GGGAAAGATGTGAACTACTGTGGCCAGAGGGTGAACTATGGTAGATaGCTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACAT +
Preference number: 2 (lower is better)
Translates to: GKDVNYCGQRVNYGR*LLKMGAAMFLPKQH
Trigger: ATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAGCAATCTACCATAGTTCACCCTCTGGCCACAGTAGTTCACATCTTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR GCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACTCGGCCTCCTAAAGTaGTGGGATTTCAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLGLLK*WDFRCE
Trigger: CTCACACCTGAAATCCCAGCACTTTAGGAGGCCGAG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR GCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATTGTCCAGGCTGGAGTaGAGTGGTGCATTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLSRLE*SGAFLA
Trigger: AGCCAAGAATGCACCACTGCACTCCAGCCTGGACAA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACCATGTTACCCAGGCTaGTCTTCAACTCCTGGACTC +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALPCYPG*SSTPGL
Trigger: GAGTCCAGGAGTTGAAGACCAGCCTGGGTAACATGG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACTGAGCCACTGCGCCTaGCAGACCACCTATATTACT +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLSHCA*QTTYIT
Trigger: AGTAATATAGGTGGTCTGCCAGGCGCAGTGGCTCAG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAACATCCCAGACTCACTaGCAATCAACAGTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKTSQTH*QSTVQA
Trigger: GGCTTGGACTGTTGATTGCCAGTGAGTCTGGGATGT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATCTGCCAGTACCATGTaGAGCAAAGGGAAGCATCCT +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALSASTM*SKGKHP
Trigger: AGGATGCTTCCCTTTGCTCCACATGGTACTGGCAGA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAAGAGTGAGACTTCTGTaGGGAGAGGAGTGTCCTTTG +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALRVRLL*GEECPL
Trigger: CAAAGGACACTCCTCTCCCCACAGAAGTCTCACTCT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACCATCAGCTGAATCCTaGGGTGGGGATGCTTCAGTC +
Preference number: 2 (lower is better)
Translates to: LNKSTLKRLMRQWGECELPSAES*GGDASV
Trigger: GACTGAAGCATCCCCACCTCAGGATTCAGCTGATGG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAGGTGTGATAATCCTATaGAGTGTCTGGGTTTGGGTC +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALGVIIL*SVWVWV
Trigger: GACCCAAACCCAGACACTTCATAGGATTATCACACC...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGGTGTGATAATCCTATaGAGTGTCTGGGTTTGGGTC +
Preference number: 2 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKGVIIL*SVWVWV
Trigger: GACCCAAACCCAGACACTTCATAGGATTATCACACC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR GCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGCAGAAGTGACAGTGTaGAAGTATGAATGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKAEVTV*KYEWGL
Trigger: CAGACCCCATTCATACTTGCACACTGTCACTTCTGC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACTGAATCTGTCCCTGTaGCTTGCTTTCACCAATAGA +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLNLSL*LAFTNR
Trigger: TCTATTGGTGAAAGCAAGTCACAGGGACAGATTCAG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAAGCAACATTCTCCTTTaGAATGTGACTTTGCCACCC +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALSNILL*NVTLPP
Trigger: GGGTGGCAAAGTCACATTTCAAAGGAGAATGTTGCT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR GCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAATCCTGAGGTGGGGATaGTTCAGTCTTTACAGAACA +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALILRWG*FSLYRT
Trigger: TGTTCTGTAAAGACTGAAGCATCCCCACCTCAGGAT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR GCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAATCCTGAGGTGGGGATaGTTCAGTCTTTACAGAACA +
Preference number: 2 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKILRWG*FSLYRT
Trigger: TGTTCTGTAAAGACTGAAGCATCCCCACCTCAGGAT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAAGGGAAGCATCCTCATaGATGATGCCTGAATTCTTG +
Preference number: 2 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKREASS*MMPEFL
Trigger: CAAGAATTCAGGCATCATCCATGAGGATGCTTCCCT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAAGGGAAGCATCCTCATaGATGATGCCTGAATTCTTG +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALREASS*MMPEFL
Trigger: CAAGAATTCAGGCATCATCCATGAGGATGCTTCCCT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACTCATGGATGATGCCTaGATTCTTGATCCACAGAAT +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLMDDA*ILDPQN
Trigger: ATTCTGTGGATCAAGAATTCAGGCATCATCCATGAG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAAGATTGTGGCAGAAGTaGCAGTGTGCAAGTATGAAT +
Preference number: 2 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKRLWQK*QCASMN
Trigger: ATTCATACTTGCACACTGTCACTTCTGCCACAATCT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACTAGCAACATGTGCTTaGCTGGATTTCAGAATTGCT +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLATCA*LDFRIA
Trigger: AGCAATTCTGAAATCCAGTCAAGCACATGTTGCTAG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR GCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAGAGAGGAGTGTCCTTTaGATTTGGGAAAGATGTGAA +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALERSVL*IWERCE
Trigger: TTCACATCTTTCCCAAATGCAAAGGACACTCCTCTC...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAAGAAAGCAGATAATGTaGTTACCACTGTCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALRKQIM*LPLSLQ
Trigger: CTGGAGAGACAGTGGTAACCACATTATCTGCTTTCT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACAGAATTGCTATAAATaGGTGACTGCTGCTTCCTTT +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALQNCYK*VTAASF
Trigger: AAAGGAAGCAGCAGTCACTCATTTATAGCAATTCTG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAAGTGTCCTTTGCATTTaGGAAAGATGTGAACTACTG +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALSVLCI*ERCELL
Trigger: CAGTAGTTCACATCTTTCCCAAATGCAAAGGACACT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACGAAGAAGCTTTATCTaGTCTGAACCTGATTTAGAT +
Preference number: 2 (lower is better)
Translates to: KDRNKGAERYQSDKRIALRRSFI*SEPDLD
Trigger: ATCTAAATCAGGTTCAGATCAGATAAAGCTTCTTCG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAACCATCAAAGAGTTCTaGGGTCATTTCAAAACAACT +
Preference number: 2 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKTIKEF*GHFKTT
Trigger: AGTTGTTTTGAAATGACCCCAGAACTCTTTGATGGT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR TCA 72 bp AGGAGGTCCTGGACTTTGTTCCAATGCTGCAGAGAGTaGGACTTCTGTGGGGAGAGGAGTGTCCTTTGCATT +
Preference number: 3 (lower is better)
Translates to: RRSWTLFQCCRE*DFCGERSVLCI
Trigger: AATGCAAAGGACACTCCTCTCCCCACAGAAGTCTCACTCTCTGCAGCATTGGAACAAAGTCCAGGACCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR TCA 72 bp CCAATAGATTGTGGCAGAAGTGACAGTGTGCAAGTATaGATGGGGTCTGCCAGTACCATGTGGAGCAAAGGG +
Preference number: 3 (lower is better)
Translates to: PIDCGRSDSVQV*MGSASTMWSKG
Trigger: CCCTTTGCTCCACATGGTACTGGCAGACCCCATTCATACTTGCACACTGTCACTTCTGCCACAATCTATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR TCA 72 bp GAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTaGAATGTGACTTTGCCACCCATCGCATCAAGAGGT +
Preference number: 3 (lower is better)
Translates to: EQQCFFPSNILL*NVTLPPIASRG
Trigger: ACCTCTTGATGCGATGGGTGGCAAAGTCACATTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR TCA 72 bp ATCGCATCAAGAGGTAAGGTCTATTCTCCCTCCTTCTaGATCTGTCCCTGTGACTTGCTTTCACCAATAGAT +
Preference number: 3 (lower is better)
Translates to: IASRGKVYSPSF*ICPCDLLSPID
Trigger: ATCTATTGGTGAAAGCAAGTCACAGGGACAGATTCAGAAGGAGGGAGAATAGACCTTACCTCTTGATGCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR CCA 72 bp CTTCAGTTGACTGAAAGGCAGAGCAAAAAGGAAGTATaGAGAAGTCGTGTCAAGAAAAGACCAGCAGGGAAT +
Preference number: 3 (lower is better)
Translates to: LQLTERQSKKEV*RSRVKKRPAGN
Trigger: ATTCCCTGCTGGTCTTTTCTTGACACGACTTCTCCATACTTCCTTTTTGCTCTGCCTTTCAGTCAACTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACTAAAAGTGGGGAACTaGCACATGCCTGTAATCCCA +
Preference number: 3 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLKVGN*HMPVIP
Trigger: TGGGATTACAGGCATGTGCAAGTTCCCCACTTTTAG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAATGATGCCTGAATTCTaGATCCACAGAATAGTGAGC +
Preference number: 3 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKMMPEF*IHRIVS
Trigger: GCTCACTATTCTGTGGATCAAGAATTCAGGCATCAT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAATCTGTCCCTGTGACTaGCTTTCACCAATAGATTGT +
Preference number: 3 (lower is better)
Translates to: KDRNKGAERYQSDKRIALICPCD*LSPIDC
Trigger: ACAATCTATTGGTGAAAGCAAGTCACAGGGACAGAT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAATCTGTCCCTGTGACTaGCTTTCACCAATAGATTGT +
Preference number: 3 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKICPCD*LSPIDC
Trigger: ACAATCTATTGGTGAAAGCAAGTCACAGGGACAGAT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAAAGCAACATTCTCCTTaGAAATGTGACTTTGCCACC +
Preference number: 3 (lower is better)
Translates to: KDRNKGAERYQSDKRIALKQHSP*KCDFAT
Trigger: GGTGGCAAAGTCACATTTCAAAGGAGAATGTTGCTT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR TCA 72 bp GTTAACTTTTATTGTTGTACCTGGGGATTGAGCAAGTaGGTAAATAATACTGTTGGAGAAGGGAGACACCAA +
Preference number: 3 (lower is better)
Translates to: VNFYCCTWGLSK*VNNTVGEGRHQ
Trigger: TTGGTGTCTCCCTTCTCCAACAGTATTATTTACTCACTTGCTCAATCCCCAGGTACAACAATAAAAGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
3UTR TCA 72 bp AGAGCCAAATGCAGTGTGTGGAACTTGTTTAGATCCTaGTTTGAACAAATCAACTCTAAAAAGACTTATGAG +
Preference number: 3 (lower is better)
Translates to: RAKCSVWNLFRS*FEQINSKKTYE
Trigger: CTCATAAGTCTTTTTAGAGTTGATTTGTTCAAATCAGGATCTAAACAAGTTCCACACACTGCATTTGGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTGGGGGCAGCGCCAGTaGGGTATGGAGGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMWGQRQ*GMEGAS
Trigger: GGAAGCTCCCTCCATACCCCACTGGCGCTGCCCCCA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTGGGGGCAGCGCCAGTaGGGTATGGAGGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVWGQRQ*GMEGAS
Trigger: GGAAGCTCCCTCCATACCCCACTGGCGCTGCCCCCA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTGGTTGAGGGGGTTGTaGTGGGGGCAGCGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVWLRGL*WGQRQW
Trigger: CCACTGGCGCTGCCCCCACCACAACCCCCTCAACCA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGGCCTCGTGGGGCTaGCTCTGCTCCTCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMVASWG*LCSSSL
Trigger: AAGGGAGGAGGAGCAGAGCCAGCCCCACGAGGCCAC...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540870.5
CDS-3UTR CCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGTGGGGGCAGCGCCAGTaGGGTATGGAGGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKWGQRQ*GMEGAS
Trigger: GGAAGCTCCCTCCATACCCCACTGGCGCTGCCCCCA...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAATGGTTGAGGGGGTTGTaGTGGGGGCAGCGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSEWLRGL*WGQRQW
Trigger: CCACTGGCGCTGCCCCCACCACAACCCCCTCAACCA...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTACAGGACAGGGTCAGATaGGCTGGGCGACTCACTCAG +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALQDRVR*AGRLTQ
Trigger: CTGAGTGAGTCGCCCAGCCCATCTGACCCTGTCCTG...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGCAGGACAGGGTCAGATaGGCTGGGCGACTCACTCAG +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVQDRVR*AGRLTQ
Trigger: CTGAGTGAGTCGCCCAGCCCATCTGACCCTGTCCTG...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGATGTTCCAGGCTCACTaGCTCTTGGCGCACAGGGTG +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVMFQAH*LLAHRV
Trigger: CACCCTGTGCGCCAAGAGTCAGTGAGCCTGGAACAT...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTAATGTTCCAGGCTCACTaGCTCTTGGCGCACAGGGTG +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALMFQAH*LLAHRV
Trigger: CACCCTGTGCGCCAAGAGTCAGTGAGCCTGGAACAT...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGGATTCCGTGTCTAGATaGGGCTGTCCCTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVDSVSR*GCPSWE
Trigger: CTCCCAGGAGGGACAGCCTCATCTAGACACGGAATC...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000540870.5
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGCTGCTCCTCCTCCCTTaGCTGAGAGACGTCATGGAG +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMLLLLP*LRDVME
Trigger: CTCCATGACGTCTCTCAGTCAAGGGAGGAGGAGCAG...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540870.5
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGCTTGGCAGGAACAAGTaGCCCTGTCTTCCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMLGRNK*PCLPWP
Trigger: AGGCCACGGAAGACAGGGTCACTTGTTCCTGCCAAG...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540870.5
CDS-3UTR GCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTTCTCTTGGATGCCATaGCCAGGTGAGGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVFSWMP*PGEAAP
Trigger: AGGGGCAGCCTCACCTGGGCATGGCATCCAAGAGAA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR GCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTTCTCTTGGATGCCATaGCCAGGTGAGGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMFSWMP*PGEAAP
Trigger: AGGGGCAGCCTCACCTGGGCATGGCATCCAAGAGAA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR GCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGGAGCTTCTCTTGGATaGCATGCCCAGGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMGASLG*HAQVRL
Trigger: CAGCCTCACCTGGGCATGGCATCCAAGAGAAGCTCC...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGAGCGCCAGTGGGGTATaGAGGGAGCTTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVSASGV*RELPSA
Trigger: AGCAGAAGGAAGCTCCCTCCATACCCCACTGGCGCT...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGAGCGCCAGTGGGGTATaGAGGGAGCTTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMSASGV*RELPSA
Trigger: AGCAGAAGGAAGCTCCCTCCATACCCCACTGGCGCT...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTACAGGGTCAGATGGGCTaGGCGACTCACTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALQGQMG*ATHSGS
Trigger: AGATCCTGAGTGAGTCGCCCAGCCCATCTGACCCTG...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGCAGGGTCAGATGGGCTaGGCGACTCACTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMQGQMG*ATHSGS
Trigger: AGATCCTGAGTGAGTCGCCCAGCCCATCTGACCCTG...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTATTCTTCCTTCCTGGATaGGTGCAGGGAGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALFFLPG*VQGEAG
Trigger: TCCTGCCTCTCCCTGCACTCATCCAGGAAGGAAGAA...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTTCTTCCTTCCTGGATaGGTGCAGGGAGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVFFLPG*VQGEAG
Trigger: TCCTGCCTCTCCCTGCACTCATCCAGGAAGGAAGAA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGCCCTTCATGGGCATCTaGGGATCCTGGCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVPFMGI*GSWQQE
Trigger: TTCTTGCTGCCAGGATCCTCAGATGCCCATGAAGGG...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540870.5
CDS-3UTR GCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGTTCTCTTGGATGCCATaGCCAGGTGAGGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKFSWMP*PGEAAP
Trigger: AGGGGCAGCCTCACCTGGGCATGGCATCCAAGAGAA...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR GCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGGGAGCTTCTCTTGGATaGCATGCCCAGGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKGASLG*HAQVRL
Trigger: CAGCCTCACCTGGGCATGGCATCCAAGAGAAGCTCC...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGGTGCTGGACACCTCCTaGGGCTCTTCTGGGTCATTT +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVVLDTS*GSSGSF
Trigger: AAATGACCCAGAAGAGCCCCAGGAGGTGTCCAGCAC...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGCTGGACACCTCCTaGGGCTCTTCTGGGTCATTT +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMVLDTS*GSSGSF
Trigger: AAATGACCCAGAAGAGCCCCAGGAGGTGTCCAGCAC...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTATGTCTGAAGGTGTGCTaGACACCTCCTGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALCLKVC*TPPGAL
Trigger: AAGAGCCCCAGGAGGTGTCCAGCACACCTTCAGACA...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTGTCTGAAGGTGTGCTaGACACCTCCTGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVCLKVC*TPPGAL
Trigger: AAGAGCCCCAGGAGGTGTCCAGCACACCTTCAGACA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTGTCTGAAGGTGTGCTaGACACCTCCTGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMCLKVC*TPPGAL
Trigger: AAGAGCCCCAGGAGGTGTCCAGCACACCTTCAGACA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTGGAAAGCCCCTTCATaGGCATCTGAGGATCCTGGC +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMWKAPS*ASEDPG
Trigger: GCCAGGATCCTCAGATGCCCATGAAGGGGCTTTCCA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540870.5
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGGAACATCCTGGACTTTaGGTTTGTCGTTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVEHPGL*VCRSCP
Trigger: GGGGCAGGAACGACAAACTCAAAGTCCAGGATGTTC...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTAGAACATCCTGGACTTTaGGTTTGTCGTTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALEHPGL*VCRSCP
Trigger: GGGGCAGGAACGACAAACTCAAAGTCCAGGATGTTC...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTCCTCTCCAGTTGGGTaGGAATGTTGTGCACCACTC +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMSSPVG*ECCAPL
Trigger: GAGTGGTGCACAACATTCTCACCCAACTGGAGAGGA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTATCAGAAGCTCTAAGGTaGGCCTCCAGACAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALSEALR*ASRQGK
Trigger: CTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGA...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTCAGAAGCTCTAAGGTaGGCCTCCAGACAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMSEALR*ASRQGK
Trigger: CTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTCAGAAGCTCTAAGGTaGGCCTCCAGACAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVSEALR*ASRQGK
Trigger: CTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGCCCAAATGTGGAGGTaGCTCAGAGCTTGGAAACTC +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMAQMWR*LRAWKL
Trigger: GAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGC...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTAGATTCCGTGTCTAGATaGGGCTCCTGGGAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALDSVSR*GSWEAF
Trigger: AAAAGCCTCCCAGGAGCCTCATCTAGACACGGAATC...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392048.7
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTCCTCCTCCCTTGACTaGGAGACGTCATGGAGATTG +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVSSSLD*ETSWRL
Trigger: CAATCTCCATGACGTCTCTCAGTCAAGGGAGGAGGA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540870.5
CDS-3UTR GCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTAAGGATCTCATCGCTTTaGTGGGAGGATGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALRISSL*WEDVPG
Trigger: GCCTGGAACATCCTCCCAGCAAAGCGATGAGATCCT...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR GCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGAGGATCTCATCGCTTTaGTGGGAGGATGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVRISSL*WEDVPG
Trigger: GCCTGGAACATCCTCCCAGCAAAGCGATGAGATCCT...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR GCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGGAGCTTCTCTTGGATaGCATGCCCAGGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSEGASLG*HAQVRL
Trigger: CAGCCTCACCTGGGCATGGCATCCAAGAGAAGCTCC...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAAGCGCCAGTGGGGTATaGAGGGAGCTTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSESASGV*RELPSA
Trigger: AGCAGAAGGAAGCTCCCTCCATACCCCACTGGCGCT...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATGGGGGCAGCGCCAGTaGGGTATGGAGGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALWGQRQ*GMEGAS
Trigger: GGAAGCTCCCTCCATACCCCACTGGCGCTGCCCCCA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATGGTTGAGGGGGTTGTaGTGGGGGCAGCGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALWLRGL*WGQRQW
Trigger: CCACTGGCGCTGCCCCCACCACAACCCCCTCAACCA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGCTCCTGGGGCTCTTCTaGGTCATTTGGTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVLLGLF*VIWFWR
Trigger: TCTCCAGAACCAAATGACCCAGAAGAGCCCCAGGAG...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTCAGTTCTCGCCTTTTaGGCCCTTGTCTCTACCGTG +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMSVLAF*ALVSTV
Trigger: CACGGTAGAGACAAGGGCCCAAAAGGCGAGAACTGA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGCCAGCTTCTGGTGCATaGAGTGCTGAAAAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVPASGA*SAEKEP
Trigger: AGGCTCTTTTTCAGCACTTCATGCACCAGAAGCTGG...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGTCCTCTCCAGTTGGGTaGGAATGTTGTGCACCACTC +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKSSPVG*ECCAPL
Trigger: GAGTGGTGCACAACATTCTCACCCAACTGGAGAGGA...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAATTCTTCCTTCCTGGATaGGTGCAGGGAGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSEFFLPG*VQGEAG
Trigger: TCCTGCCTCTCCCTGCACTCATCCAGGAAGGAAGAA...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGCTGGGCATCTCTTCTaGGTCTTCTTCCGCATTCAT +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMAGHLF*VFFRIH
Trigger: ATGAATGCGGAAGAAGACTCAGAAGAGATGCCCAGC...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGCTTTCCTTTCTTGTCTaGAGGTGTGCTGGACACCTC +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMLSFLV*RCAGHL
Trigger: GAGGTGTCCAGCACACCTTCAGACAAGAAAGGAAAG...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTTTGGACCCTCATCATaGCCTCTGAGTTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMFGPSS*PLSSRL
Trigger: CAACCTGGAACTCAGAGGTCATGATGAGGGTCCAAA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR GCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTATGGGTGAGAATGTTGTaGACCACTCTGGATACAGGG +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALWVRML*TTLDTG
Trigger: CCCTGTATCCAGAGTGGTGCACAACATTCTCACCCA...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR GCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTGGGTGAGAATGTTGTaGACCACTCTGGATACAGGG +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVWVRML*TTLDTG
Trigger: CCCTGTATCCAGAGTGGTGCACAACATTCTCACCCA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR GCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTACAGACAGGGAAAGTCTaGAACATGGTGACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALQTGKV*NMVTER
Trigger: CCTCTCAGTCACCATGTTGCAGACTTTCCCTGTCTG...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR GCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGCAGACAGGGAAAGTCTaGAACATGGTGACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVQTGKV*NMVTER
Trigger: CCTCTCAGTCACCATGTTGCAGACTTTCCCTGTCTG...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGATCTCATCGCTTTGCTaGGAGGATGTTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMISSLC*EDVPGS
Trigger: TGAGCCTGGAACATCCTCCCAGCAAAGCGATGAGAT...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTAATCTCATCGCTTTGCTaGGAGGATGTTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALISSLC*EDVPGS
Trigger: TGAGCCTGGAACATCCTCCCAGCAAAGCGATGAGAT...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGATCTCATCGCTTTGCTaGGAGGATGTTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVISSLC*EDVPGS
Trigger: TGAGCCTGGAACATCCTCCCAGCAAAGCGATGAGAT...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGTGCTGGACACCTCCTaGGGCTCTTCTGGGTCATTT +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSEVLDTS*GSSGSF
Trigger: AAATGACCCAGAAGAGCCCCAGGAGGTGTCCAGCAC...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTTGTGTGACCCTTCGTaGTGTACTAGGCGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMLCDPS*CTRRLL
Trigger: CAGAAGACGCCTAGTACACCACGAAGGGTCACACAA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTATTGTGTGACCCTTCGTaGTGTACTAGGCGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALLCDPS*CTRRLL
Trigger: CAGAAGACGCCTAGTACACCACGAAGGGTCACACAA...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTGGTGCATGAAGTGCTaGAAAAGAGCCTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMWCMKC*KRASSM
Trigger: CATGGAAGAGGCTCTTTTTCAGCACTTCATGCACCA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCCAGCTTCTGGTGCATaGAGTGCTGAAAAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKPASGA*SAEKEP
Trigger: AGGCTCTTTTTCAGCACTTCATGCACCAGAAGCTGG...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGAGTGGGGCATCTCTTaGGGGTCTTCTTTATCTCTT +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMEWGIS*GSSLSL
Trigger: AAGAGATAAAGAAGACCCTCAAGAGATGCCCCACTC...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTACCTGATCCACCCTTTTaGGCTTCTTTTGGATTCCGT +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALPDPPF*ASFGFR
Trigger: ACGGAATCCAAAAGAAGCTCAAAAGGGTGGATCAGG...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGCCTGATCCACCCTTTTaGGCTTCTTTTGGATTCCGT +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMPDPPF*ASFGFR
Trigger: ACGGAATCCAAAAGAAGCTCAAAAGGGTGGATCAGG...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGATCAATGATCTCCTCTaGTCTCGACTTTCGGGCACA +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMINDLL*SRLSGT
Trigger: TGTGCCCGAAAGTCGAGATCAGAGGAGATCATTGAT...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGAGTCGTCTTTCCTTTaGGTCACCTTATCCACCACT +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMESSFL*VTLSTT
Trigger: AGTGGTGGATAAGGTGACTCAAAGGAAAGACGACTC...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGGAGTCGTCTTTCCTTTaGGTCACCTTATCCACCACT +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVESSFL*VTLSTT
Trigger: AGTGGTGGATAAGGTGACTCAAAGGAAAGACGACTC...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGTTTGGACCCTCATCATaGCCTCTGAGTTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKFGPSS*PLSSRL
Trigger: CAACCTGGAACTCAGAGGTCATGATGAGGGTCCAAA...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACGAATCAGCTGGTCCTaGGGCTGCATCTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALRISWS*GCICLS
Trigger: GGAGAGGCAGATGCAGCCTCAGGACCAGCTGATTCG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358662.9
CDS-3UTR GCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGGGATTGGTGTGTCTCTaGTCTGCCATTCATAGGAAG +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVGLVCL*SAIHRK
Trigger: CTTCCTATGAATGGCAGAGCAGAGACACACCAATCC...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR GCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGGATTGGTGTGTCTCTaGTCTGCCATTCATAGGAAG +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMGLVCL*SAIHRK
Trigger: CTTCCTATGAATGGCAGAGCAGAGACACACCAATCC...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR GCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAAGGATCTCATCGCTTTaGTGGGAGGATGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSERISSL*WEDVPG
Trigger: GCCTGGAACATCCTCCCAGCAAAGCGATGAGATCCT...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR GCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGCATCCTCATTCCGAATaGACTTCACTGAGGATCCGT +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVHPHSE*TSLRIR
Trigger: ACGGATCCTCAGTGAAGTGCATTCGGAATGAGGATG...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR GCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGCTCACTGCGACCTCTaGCTCCCAGGCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKAHCDL*LPGSSF
Trigger: GAAGGATGAGCCTGGGAGGCAGAGGTCGCAGTGAGC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATTGCCCAGGCTGGAGTaGAGTGGTGGGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKLPRLE*SGGISA
Trigger: AGCCGAGATCCCACCACTGCACTCCAGCCTGGGCAA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAACAGGGTCAGATGGGCTaGGCGACTCACTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEQGQMG*ATHSGS
Trigger: AGATCCTGAGTGAGTCGCCCAGCCCATCTGACCCTG...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGCAGGACAGGGTCAGATaGGCTGGGCGACTCACTCAG +
Preference number: 4 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQQDRVR*AGRLTQ
Trigger: CTGAGTGAGTCGCCCAGCCCATCTGACCCTGTCCTG...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACAGGACAGGGTCAGATaGGCTGGGCGACTCACTCAG +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALQDRVR*AGRLTQ
Trigger: CTGAGTGAGTCGCCCAGCCCATCTGACCCTGTCCTG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGGTACTAGGCGTCTTCTaGGACCTCTTTCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVVLGVF*DLFPSF
Trigger: GAATGAAGGAAAGAGGTCCCAGAAGACGCCTAGTAC...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGACCTTATCCACCACTTaGAGCTTCTCTTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMTLSTT*SFSWMP
Trigger: TGGCATCCAAGAGAAGCTCCAAGTGGTGGATAAGGT...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAAGCCTCTTGAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKSLLSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACTCAAGAGGCT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACAGGCTGGAGTGCAGTaGTGGGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKQAGVQ*WDLGSL
Trigger: CAGTGAGCCGAGATCCCACCACTGCACTCCAGCCTG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGGAGTGGGGCATCTCTTaGGGGTCTTCTTTATCTCTT +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKEWGIS*GSSLSL
Trigger: AAGAGATAAAGAAGACCCTCAAGAGATGCCCCACTC...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAACTTTCCTTTCTTGTCTaGAGGTGTGCTGGACACCTC +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSELSFLV*RCAGHL
Trigger: GAGGTGTCCAGCACACCTTCAGACAAGAAAGGAAAG...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGATTCCGTGTCTAGATaGGGCTGTCCCTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKDSVSR*GCPSWE
Trigger: CTCCCAGGAGGGACAGCCTCATCTAGACACGGAATC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGGATTCCGTGTCTAGATaGGGCTGTCCCTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQDSVSR*GCPSWE
Trigger: CTCCCAGGAGGGACAGCCTCATCTAGACACGGAATC...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258382.10
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAGATTCCGTGTCTAGATaGGGCTGTCCCTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALDSVSR*GCPSWE
Trigger: CTCCCAGGAGGGACAGCCTCATCTAGACACGGAATC...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGATCAATGATCTCCTCTaGTCTCGACTTTCGGGCACA +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKINDLL*SRLSGT
Trigger: TGTGCCCGAAAGTCGAGATCAGAGGAGATCATTGAT...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGGAGTCGTCTTTCCTTTaGGTCACCTTATCCACCACT +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKESSFL*VTLSTT
Trigger: AGTGGTGGATAAGGTGACTCAAAGGAAAGACGACTC...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGGGGAGCTTAGAACAGTaGAAATCCACAGTGTCACTT +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVGSLEQ*KSTVSL
Trigger: AAGTGACACTGTGGATTTTCACTGTTCTAAGCTCCC...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGCCGAATGCACTTCACTaGGGATCCGTGTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVPNALH*GSVFHF
Trigger: AAAATGAAACACGGATCCTCAGTGAAGTGCATTCGG...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTACTGCAACATGGTGACTaGGAGGGTAGTAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALLQHGD*EGSRNS
Trigger: TGAATTTCTACTACCCTCTCAGTCACCATGTTGCAG...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGCTGCAACATGGTGACTaGGAGGGTAGTAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVLQHGD*EGSRNS
Trigger: TGAATTTCTACTACCCTCTCAGTCACCATGTTGCAG...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACATTTCAGCTGGTCCTaGGGCTGCATCTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKHFSWS*GCICLS
Trigger: GGAGAGGCAGATGCAGCCTCAGGACCAGCTGAAATG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258381.11
CDS-3UTR GCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAATGGGTGAGAATGTTGTaGACCACTCTGGATACAGGG +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSEWVRML*TTLDTG
Trigger: CCCTGTATCCAGAGTGGTGCACAACATTCTCACCCA...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR GCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATTCTCTTGGATGCCATaGCCAGGTGAGGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKFSWMP*PGEAAP
Trigger: AGGGGCAGCCTCACCTGGGCATGGCATCCAAGAGAA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATTCTCTTGGATGCCATaGCCAGGTGAGGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALFSWMP*PGEAAP
Trigger: AGGGGCAGCCTCACCTGGGCATGGCATCCAAGAGAA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAGGAGCTTCTCTTGGATaGCATGCCCAGGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALGASLG*HAQVRL
Trigger: CAGCCTCACCTGGGCATGGCATCCAAGAGAAGCTCC...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAACAGACAGGGAAAGTCTaGAACATGGTGACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSEQTGKV*NMVTER
Trigger: CCTCTCAGTCACCATGTTGCAGACTTTCCCTGTCTG...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR GCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTAGTTTTGAAGATGCCATaGCCAAATGTGGAGGTGACT +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALVLKMP*PNVEVT
Trigger: AGTCACCTCCACATTTGGGCATGGCATCTTCAAAAC...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGATCACTCCTCAAGATTaGGAGAGTTACAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMITPQD*ESYREM
Trigger: CATCTCCCTGTAACTCTCCCAATCTTGAGGAGTGAT...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAAGCGCCAGTGGGGTATaGAGGGAGCTTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKSASGV*RELPSA
Trigger: AGCAGAAGGAAGCTCCCTCCATACCCCACTGGCGCT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAAGCGCCAGTGGGGTATaGAGGGAGCTTCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALSASGV*RELPSA
Trigger: AGCAGAAGGAAGCTCCCTCCATACCCCACTGGCGCT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATGGGGGCAGCGCCAGTaGGGTATGGAGGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELWGQRQ*GMEGAS
Trigger: GGAAGCTCCCTCCATACCCCACTGGCGCTGCCCCCA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGCCCTTGTCTCTACCGTaGAGTTACAAGTTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVPLSLP*SYKLSH
Trigger: ATGACTCAACTTGTAACTCCACGGTAGAGACAAGGG...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTCACGCAGGTTAATTTaGCTGAACAATGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMSRRLI*LNNVTR
Trigger: TCTGGTGACATTGTTCAGTCAAATTAACCTGCGTGA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTATCACGCAGGTTAATTTaGCTGAACAATGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALSRRLI*LNNVTR
Trigger: TCTGGTGACATTGTTCAGTCAAATTAACCTGCGTGA...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTCACGCAGGTTAATTTaGCTGAACAATGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVSRRLI*LNNVTR
Trigger: TCTGGTGACATTGTTCAGTCAAATTAACCTGCGTGA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGAAGCACCAACACGTTTaGAGCTTCTGTAAATCGTCA +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVKHQHV*SFCKSS
Trigger: TGACGATTTACAGAAGCTTCAAACGTGTTGGTGCTT...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATTCTTCCTTCCTGGATaGGTGCAGGGAGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKFFLPG*VQGEAG
Trigger: TCCTGCCTCTCCCTGCACTCATCCAGGAAGGAAGAA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGCGTGGAGTTACAAGTTaGGTCATCTTTCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMRGVTS*VIFLLR
Trigger: CCTCAAAAGAAAGATGACTCAACTTGTAACTCCACG...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGGGGAGCTTAGAACAGTaGAAATCCACAGTGTCACTT +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKGSLEQ*KSTVSL
Trigger: AAGTGACACTGTGGATTTTCACTGTTCTAAGCTCCC...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCCGAATGCACTTCACTaGGGATCCGTGTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKPNALH*GSVFHF
Trigger: AAAATGAAACACGGATCCTCAGTGAAGTGCATTCGG...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTGCAACATGGTGACTaGGAGGGTAGTAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKLQHGD*EGSRNS
Trigger: TGAATTTCTACTACCCTCTCAGTCACCATGTTGCAG...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAGCCCAAATGTGGAGGTaGCTCAGAGCTTGGAAACTC +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEAQMWR*LRAWKL
Trigger: GAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGC...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACCATCAGCTGAATCCTaGGGTGGGGATGCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALPSAES*GGDASV
Trigger: GACTGAAGCATCCCCACCTCAGGATTCAGCTGATGG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACAATGCTGCAGAGAGTaGGACTTCTGTGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALQCCRE*DFCGER
Trigger: CCTCTCCCCACAGAAGTCTCACTCTCTGCAGCATTG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACAATGCTGCAGAGAGTaGGACTTCTGTGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKQCCRE*DFCGER
Trigger: CCTCTCCCCACAGAAGTCTCACTCTCTGCAGCATTG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTTGATCTGCTTGAGTTaGATGACTTTTCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVLICLS*MTFPPS
Trigger: AGAGGGTGGAAAAGTCATTCAACTCAAGCAGATCAA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540870.5
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTGTTGTGCACCACTCTaGATACAGGGATCAAATTTC +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMCCAPL*IQGSNF
Trigger: GAAATTTGATCCCTGTATCCAGAGTGGTGCACAACA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGATTATCTCTTATCTCTaGCATAGAGCCCAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVIISYL*HRAQGR
Trigger: TCTCCCTTGGGCTCTATGCCAGAGATAAGAGATAAT...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTAATTATCTCTTATCTCTaGCATAGAGCCCAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALIISYL*HRAQGR
Trigger: TCTCCCTTGGGCTCTATGCCAGAGATAAGAGATAAT...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAACTCCTGGGGCTCTTCTaGGTCATTTGGTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLELLGLF*VIWFWR
Trigger: TCTCCAGAACCAAATGACCCAGAAGAGCCCCAGGAG...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGTGCTGGACACCTCCTaGGGCTCTTCTGGGTCATTT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKVLDTS*GSSGSF
Trigger: AAATGACCCAGAAGAGCCCCAGGAGGTGTCCAGCAC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATGTCTGAAGGTGTGCTaGACACCTCCTGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALCLKVC*TPPGAL
Trigger: AAGAGCCCCAGGAGGTGTCCAGCACACCTTCAGACA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATGTCTGAAGGTGTGCTaGACACCTCCTGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKCLKVC*TPPGAL
Trigger: AAGAGCCCCAGGAGGTGTCCAGCACACCTTCAGACA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAATCAGTTCTCGCCTTTTaGGCCCTTGTCTCTACCGTG +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLESVLAF*ALVSTV
Trigger: CACGGTAGAGACAAGGGCCCAAAAGGCGAGAACTGA...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGTACTAGGCGTCTTCTaGGACCTCTTTCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSEVLGVF*DLFPSF
Trigger: GAATGAAGGAAAGAGGTCCCAGAAGACGCCTAGTAC...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTATTAGTTCTTGCCTTTTaGACCCTCATCATGACCTCT +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALLVLAF*TLIMTS
Trigger: AGAGGTCATGATGAGGGTCCAAAAGGCAAGAACTAA...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTTAGTTCTTGCCTTTTaGACCCTCATCATGACCTCT +
Preference number: 4 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVLVLAF*TLIMTS
Trigger: AGAGGTCATGATGAGGGTCCAAAAGGCAAGAACTAA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
3UTR CAA 72 bp GTGAACTACTGTGGCCAGAGGGTGAACTATGGTAGATaGCTTCTAAAGATGGGAGCAGCAATGTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VNYCGQRVNYGR*LLKMGAAMFLP
Trigger: GGGAAGAAACATTGCTGCTCCCATCTTTAGAAGCAATCTACCATAGTTCACCCTCTGGCCACAGTAGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGAACATCCTGGACTTTaGGTTTGTCGTTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKEHPGL*VCRSCP
Trigger: GGGGCAGGAACGACAAACTCAAAGTCCAGGATGTTC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAACCAGCTTCTGGTGCATaGAGTGCTGAAAAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEPASGA*SAEKEP
Trigger: AGGCTCTTTTTCAGCACTTCATGCACCAGAAGCTGG...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAGCTGGGCATCTCTTCTaGGTCTTCTTCCGCATTCAT +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEAGHLF*VFFRIH
Trigger: ATGAATGCGGAAGAAGACTCAGAAGAGATGCCCAGC...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGGGAGCTTAGAACAGTaGAAATCCACAGTGTCACTT +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSEGSLEQ*KSTVSL
Trigger: AAGTGACACTGTGGATTTTCACTGTTCTAAGCTCCC...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAACCGAATGCACTTCACTaGGGATCCGTGTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSEPNALH*GSVFHF
Trigger: AAAATGAAACACGGATCCTCAGTGAAGTGCATTCGG...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGGCCCAAATGTGGAGGTaGCTCAGAGCTTGGAAACTC +
Preference number: 4 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQAQMWR*LRAWKL
Trigger: GAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGC...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAAGAAGTTGTCCCCCTTaGCAGCACACCTCGCATTCA +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKRSCPP*QHTSHS
Trigger: TGAATGCGAGGTGTGCTGTCAAGGGGGACAACTTCT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATCCCTGTTTCATCACTaGCTGTTGGCAGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALSLFHH*LLAAGK
Trigger: CTTCCCTGCTGCCAACAGTCAGTGATGAAACAGGGA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAAGGATCTCATCGCTTTaGTGGGAGGATGTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKRISSL*WEDVPG
Trigger: GCCTGGAACATCCTCCCAGCAAAGCGATGAGATCCT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACAGGTCCAACCACATTaGTTCCTGAAAGGGCTCACC +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALQVQPH*FLKGLT
Trigger: GGTGAGCCCTTTCAGGAAGCAATGTGGTTGGACCTG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACTCGGCCTCCTAAAGTaGTGGGATTTCAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKLGLLK*WDFRCE
Trigger: CTCACACCTGAAATCCCAGCACTTTAGGAGGCCGAG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATTGTCCAGGCTGGAGTaGAGTGGTGCATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKLSRLE*SGAFLA
Trigger: AGCCAAGAATGCACCACTGCACTCCAGCCTGGACAA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAACAGGCCTGAGCCACTaGGCCTGGCAGACCACCTAT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELTGLSH*AWQTTY
Trigger: ATAGGTGGTCTGCCAGGCGCAGTGGCTCAGGCCTGT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATTGCCCAGGCTGGAGTaGAGTGGTGGGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELLPRLE*SGGISA
Trigger: AGCCGAGATCCCACCACTGCACTCCAGCCTGGGCAA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGTGTTGTGCACCACTCTaGATACAGGGATCAAATTTC +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKCCAPL*IQGSNF
Trigger: GAAATTTGATCCCTGTATCCAGAGTGGTGCACAACA...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACAGGACAGGGTCAGATaGGCTGGGCGACTCACTCAG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELQDRVR*AGRLTQ
Trigger: CTGAGTGAGTCGCCCAGCCCATCTGACCCTGTCCTG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTCTTTATCTCTTATTTaGGGGATCAGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMSLSLI*GIRLSL
Trigger: CAGTGACAACCTGATCCCCCAAATAAGAGATAAAGA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACTCCTGGGGCTCTTCTaGGTCATTTGGTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLLGLF*VIWFWR
Trigger: TCTCCAGAACCAAATGACCCAGAAGAGCCCCAGGAG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTACTTTTGAGCTTCTTTTaGATTCCGTGTCTAGATGAG +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALLLSFF*IPCLDE
Trigger: CTCATCTAGACACGGAATCCAAAAGAAGCTCAAAAG...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGCTTTTGAGCTTCTTTTaGATTCCGTGTCTAGATGAG +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMLLSFF*IPCLDE
Trigger: CTCATCTAGACACGGAATCCAAAAGAAGCTCAAAAG...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATCAGTTCTCGCCTTTTaGGCCCTTGTCTCTACCGTG +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALSVLAF*ALVSTV
Trigger: CACGGTAGAGACAAGGGCCCAAAAGGCGAGAACTGA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACTGGTCTTCAACTCCTaGACTCAAGCGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLVFNS*TQAIHL
Trigger: CAGGTGGATCGCTTGAGTCCAGGAGTTGAAGACCAG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACTGGTCTTCAACTCCTaGACTCAAGCGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKLVFNS*TQAIHL
Trigger: CAGGTGGATCGCTTGAGTCCAGGAGTTGAAGACCAG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACCATGTTACCCAGGCTaGTCTTCAACTCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKPCYPG*SSTPGL
Trigger: GAGTCCAGGAGTTGAAGACCAGCCTGGGTAACATGG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACTGAGCCACTGCGCCTaGCAGACCACCTATATTACT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKLSHCA*QTTYIT
Trigger: AGTAATATAGGTGGTCTGCCAGGCGCAGTGGCTCAG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACAGGCTGGAGTGCAGTaGTGGGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELQAGVQ*WDLGSL
Trigger: CAGTGAGCCGAGATCCCACCACTGCACTCCAGCCTG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAATGGTGCATGAAGTGCTaGAAAAGAGCCTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEWCMKC*KRASSM
Trigger: CATGGAAGAGGCTCTTTTTCAGCACTTCATGCACCA...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACCAGCTTCTGGTGCATaGAGTGCTGAAAAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKPASGA*SAEKEP
Trigger: AGGCTCTTTTTCAGCACTTCATGCACCAGAAGCTGG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAATGTTCCAGGCTCACTaGCTCTTGGCGCACAGGGTG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELMFQAH*LLAHRV
Trigger: CACCCTGTGCGCCAAGAGTCAGTGAGCCTGGAACAT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGGCTGGGCATCTCTTCTaGGTCTTCTTCCGCATTCAT +
Preference number: 4 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQAGHLF*VFFRIH
Trigger: ATGAATGCGGAAGAAGACTCAGAAGAGATGCCCAGC...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAGAGTGGGGCATCTCTTaGGGGTCTTCTTTATCTCTT +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEEWGIS*GSSLSL
Trigger: AAGAGATAAAGAAGACCCTCAAGAGATGCCCCACTC...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGCTTTCCTTTCTTGTCTaGAGGTGTGCTGGACACCTC +
Preference number: 4 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQLSFLV*RCAGHL
Trigger: GAGGTGTCCAGCACACCTTCAGACAAGAAAGGAAAG...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACTTTCCTTTCTTGTCTaGAGGTGTGCTGGACACCTC +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLSFLV*RCAGHL
Trigger: GAGGTGTCCAGCACACCTTCAGACAAGAAAGGAAAG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTATCTCCTTTTTGGAGTTaGCCAGATACATCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: DAMPKCGGDSELGNSEALSPFWS*PDTSFS
Trigger: AGAAAAAGATGTATCTGGTCAACTCCAAAAAGGAGA...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTCTCCTTTTTGGAGTTaGCCAGATACATCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMSPFWS*PDTSFS
Trigger: AGAAAAAGATGTATCTGGTCAACTCCAAAAAGGAGA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATTTGGACCCTCATCATaGCCTCTGAGTTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKFGPSS*PLSSRL
Trigger: CAACCTGGAACTCAGAGGTCATGATGAGGGTCCAAA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACCGTCATTGGCTTCATaGAAACCGAGCACGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKPSLAS*KPSTSL
Trigger: CAAAGACGTGCTCGGTTTTCATGAAGCCAATGACGG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACATTTGGGAAAGATGTaGACTACTGTGGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALHLGKM*TTVARG
Trigger: CCCTCTGGCCACAGTAGTTCACATCTTTCCCAAATG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATGGGTGAGAATGTTGTaGACCACTCTGGATACAGGG +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALWVRML*TTLDTG
Trigger: CCCTGTATCCAGAGTGGTGCACAACATTCTCACCCA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAGGATTGGTGTGTCTCTaGTCTGCCATTCATAGGAAG +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEGLVCL*SAIHRK
Trigger: CTTCCTATGAATGGCAGAGCAGAGACACACCAATCC...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR GCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAACATCCTCATTCCGAATaGACTTCACTGAGGATCCGT +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEHPHSE*TSLRIR
Trigger: ACGGATCCTCAGTGAAGTGCATTCGGAATGAGGATG...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR GCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGTCTCGCACAAACCATaGCACCGTGTACATTTCCGT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKVSHKP*HRVHFR
Trigger: ACGGAAATGTACACGGTGGCATGGTTTGTGCGAGAC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACTCAAGCGATCCACCTaGCTCGGCCTCCTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELLKRST*LGLLKC
Trigger: GCACTTTAGGAGGCCGAGGCAGGTGGATCGCTTGAG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGAAATGGCTTGTGTATaGCATAGGCGATCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKEMACV*HRRSPA
Trigger: AGCTGGGGATCGCCTATGCCATACACAAGCCATTTC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAATGTTGTGCACCACTCTaGATACAGGGATCAAATTTC +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSECCAPL*IQGSNF
Trigger: GAAATTTGATCCCTGTATCCAGAGTGGTGCACAACA...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAATCTCATCGCTTTGCTaGGAGGATGTTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKISSLC*EDVPGS
Trigger: TGAGCCTGGAACATCCTCCCAGCAAAGCGATGAGAT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACAGGGTCAGATGGGCTaGGCGACTCACTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELQGQMG*ATHSGS
Trigger: AGATCCTGAGTGAGTCGCCCAGCCCATCTGACCCTG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGATGTTAACTTGTCATTaGTCACTGAAGTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMMLTCH*SLKCFF
Trigger: GAAGAAGCACTTCAGTGACCAATGACAAGTTAACAT...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGTCTTTATCTCTTATTTaGGGGATCAGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKSLSLI*GIRLSL
Trigger: CAGTGACAACCTGATCCCCCAAATAAGAGATAAAGA...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATTGTGTGACCCTTCGTaGTGTACTAGGCGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLCDPS*CTRRLL
Trigger: CAGAAGACGCCTAGTACACCACGAAGGGTCACACAA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATTGTGTGACCCTTCGTaGTGTACTAGGCGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKLCDPS*CTRRLL
Trigger: CAGAAGACGCCTAGTACACCACGAAGGGTCACACAA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACCTTATCCACCACTTaGAGCTTCTCTTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLETLSTT*SFSWMP
Trigger: TGGCATCCAAGAGAAGCTCCAAGTGGTGGATAAGGT...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAATTAGTTCTTGCCTTTTaGACCCTCATCATGACCTCT +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSELVLAF*TLIMTS
Trigger: AGAGGTCATGATGAGGGTCCAAAAGGCAAGAACTAA...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAACATCCCAGACTCACTaGCAATCAACAGTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALTSQTH*QSTVQA
Trigger: GGCTTGGACTGTTGATTGCCAGTGAGTCTGGGATGT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATCTGCCAGTACCATGTaGAGCAAAGGGAAGCATCCT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKSASTM*SKGKHP
Trigger: AGGATGCTTCCCTTTGCTCCACATGGTACTGGCAGA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAAGAGTGAGACTTCTGTaGGGAGAGGAGTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKRVRLL*GEECPL
Trigger: CAAAGGACACTCCTCTCCCCACAGAAGTCTCACTCT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATGGTGCATGAAGTGCTaGAAAAGAGCCTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKWCMKC*KRASSM
Trigger: CATGGAAGAGGCTCTTTTTCAGCACTTCATGCACCA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATTCTTCCTTCCTGGATaGGTGCAGGGAGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELFFLPG*VQGEAG
Trigger: TCCTGCCTCTCCCTGCACTCATCCAGGAAGGAAGAA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGAGTGGGGCATCTCTTaGGGGTCTTCTTTATCTCTT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKEWGIS*GSSLSL
Trigger: AAGAGATAAAGAAGACCCTCAAGAGATGCCCCACTC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGTCTCCTTTTTGGAGTTaGCCAGATACATCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKSPFWS*PDTSFS
Trigger: AGAAAAAGATGTATCTGGTCAACTCCAAAAAGGAGA...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGAGTCGTCTTTCCTTTaGGTCACCTTATCCACCACT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKESSFL*VTLSTT
Trigger: AGTGGTGGATAAGGTGACTCAAAGGAAAGACGACTC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAAGGGTCTTAGATACATaGTGGCACTGTTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALRVLDT*WHCWLP
Trigger: AGGAAGCCAACAGTGCCATCATGTATCTAAGACCCT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATCTGGGTTTGGGTCCTaGGGGCAGCCAATTACATCC +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELSGFGS*GQPITS
Trigger: GGATGTAATTGGCTGCCCTCAGGACCCAAACCCAGA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGGATTGGTGTGTCTCTaGTCTGCCATTCATAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKGLVCL*SAIHRK
Trigger: CTTCCTATGAATGGCAGAGCAGAGACACACCAATCC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGCATCCTCATTCCGAATaGACTTCACTGAGGATCCGT +
Preference number: 4 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQHPHSE*TSLRIR
Trigger: ACGGATCCTCAGTGAAGTGCATTCGGAATGAGGATG...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR GCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACATCCTCATTCCGAATaGACTTCACTGAGGATCCGT +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALHPHSE*TSLRIR
Trigger: ACGGATCCTCAGTGAAGTGCATTCGGAATGAGGATG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAGCAGAAGTGACAGTGTaGAAGTATGAATGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALAEVTV*KYEWGL
Trigger: CAGACCCCATTCATACTTGCACACTGTCACTTCTGC...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATCAAGGAAAATTTCCTaGCCTGGGATTAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKSRKIS*PGIRGN
Trigger: GTTCCCCCTAATCCCAGGGCAGGAAATTTTCCTTGA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAATCACTCCTCAAGATTaGGAGAGTTACAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEITPQD*ESYREM
Trigger: CATCTCCCTGTAACTCTCCCAATCTTGAGGAGTGAT...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGATGTTAACTTGTCATTaGTCACTGAAGTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKMLTCH*SLKCFF
Trigger: GAAGAAGCACTTCAGTGACCAATGACAAGTTAACAT...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAATCTTTATCTCTTATTTaGGGGATCAGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSESLSLI*GIRLSL
Trigger: CAGTGACAACCTGATCCCCCAAATAAGAGATAAAGA...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAGTGCTGGACACCTCCTaGGGCTCTTCTGGGTCATTT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELVLDTS*GSSGSF
Trigger: AAATGACCCAGAAGAGCCCCAGGAGGTGTCCAGCAC...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAACTTTTGAGCTTCTTTTaGATTCCGTGTCTAGATGAG +
Preference number: 4 (lower is better)
Translates to: FEDAMPKCGGDSELGNSELLSFF*IPCLDE
Trigger: CTCATCTAGACACGGAATCCAAAAGAAGCTCAAAAG...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAGTACTAGGCGTCTTCTaGGACCTCTTTCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALVLGVF*DLFPSF
Trigger: GAATGAAGGAAAGAGGTCCCAGAAGACGCCTAGTAC...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGGTACTAGGCGTCTTCTaGGACCTCTTTCCTTCATTC +
Preference number: 4 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQVLGVF*DLFPSF
Trigger: GAATGAAGGAAAGAGGTCCCAGAAGACGCCTAGTAC...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAACCTTATCCACCACTTaGAGCTTCTCTTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALTLSTT*SFSWMP
Trigger: TGGCATCCAAGAGAAGCTCCAAGTGGTGGATAAGGT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAAAGTCAAGTCCTACCTaGCCAAAGTCAGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKKSSPT*PKSEAL
Trigger: CAAGGCTTCTGACTTTGGCCAGGTAGGACTTGACTT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAGAACATCCTGGACTTTaGGTTTGTCGTTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELEHPGL*VCRSCP
Trigger: GGGGCAGGAACGACAAACTCAAAGTCCAGGATGTTC...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATCCTCTCCAGTTGGGTaGGAATGTTGTGCACCACTC +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELSSPVG*ECCAPL
Trigger: GAGTGGTGCACAACATTCTCACCCAACTGGAGAGGA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAAAGCACCAACACGTTTaGAGCTTCTGTAAATCGTCA +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEKHQHV*SFCKSS
Trigger: TGACGATTTACAGAAGCTTCAAACGTGTTGGTGCTT...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAACGTGGAGTTACAAGTTaGGTCATCTTTCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLERGVTS*VIFLLR
Trigger: CCTCAAAAGAAAGATGACTCAACTTGTAACTCCACG...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGGGAGCTTAGAACAGTaGAAATCCACAGTGTCACTT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKGSLEQ*KSTVSL
Trigger: AAGTGACACTGTGGATTTTCACTGTTCTAAGCTCCC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACCGAATGCACTTCACTaGGGATCCGTGTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALPNALH*GSVFHF
Trigger: AAAATGAAACACGGATCCTCAGTGAAGTGCATTCGG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAAGAAGTTGTCCCCCTTaGCAGCACACCTCGCATTCA +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELRSCPP*QHTSHS
Trigger: TGAATGCGAGGTGTGCTGTCAAGGGGGACAACTTCT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACTGAATCTGTCCCTGTaGCTTGCTTTCACCAATAGA +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKLNLSL*LAFTNR
Trigger: TCTATTGGTGAAAGCAAGTCACAGGGACAGATTCAG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAAGCAACATTCTCCTTTaGAATGTGACTTTGCCACCC +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKSNILL*NVTLPP
Trigger: GGGTGGCAAAGTCACATTTCAAAGGAGAATGTTGCT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACACACTTCAGTTGACTaGAAGGCAGAGCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKHTSVD*KAEQKG
Trigger: TCCTTTTTGCTCTGCCTTTCAGTCAACTGAAGTGTG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGGTTTTGAAGATGCCATaGCCAAATGTGGAGGTGACT +
Preference number: 4 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQVLKMP*PNVEVT
Trigger: AGTCACCTCCACATTTGGGCATGGCATCTTCAAAAC...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR GCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACAGGTCCAACCACATTaGTTCCTGAAAGGGCTCACC +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELQVQPH*FLKGLT
Trigger: GGTGAGCCCTTTCAGGAAGCAATGTGGTTGGACCTG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACTCGGCCTCCTAAAGTaGTGGGATTTCAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELLGLLK*WDFRCE
Trigger: CTCACACCTGAAATCCCAGCACTTTAGGAGGCCGAG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAATCACTCCTCAAGATTaGGAGAGTTACAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKITPQD*ESYREM
Trigger: CATCTCCCTGTAACTCTCCCAATCTTGAGGAGTGAT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACTCCTGGGGCTCTTCTaGGTCATTTGGTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELLLGLF*VIWFWR
Trigger: TCTCCAGAACCAAATGACCCAGAAGAGCCCCAGGAG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACCCTTGTCTCTACCGTaGAGTTACAAGTTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKPLSLP*SYKLSH
Trigger: ATGACTCAACTTGTAACTCCACGGTAGAGACAAGGG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATCAGTTCTCGCCTTTTaGGCCCTTGTCTCTACCGTG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELSVLAF*ALVSTV
Trigger: CACGGTAGAGACAAGGGCCCAAAAGGCGAGAACTGA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACCATGTTACCCAGGCTaGTCTTCAACTCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELPCYPG*SSTPGL
Trigger: GAGTCCAGGAGTTGAAGACCAGCCTGGGTAACATGG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACTCTCCAGTGAACTCTaGGTCACACACTTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKLSSEL*VTHFWL
Trigger: TAACCAAAAGTGTGTGACCCAGAGTTCACTGGAGAG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACTCTCCAGTGAACTCTaGGTCACACACTTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLSSEL*VTHFWL
Trigger: TAACCAAAAGTGTGTGACCCAGAGTTCACTGGAGAG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACCAGCTTCTGGTGCATaGAGTGCTGAAAAAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELPASGA*SAEKEP
Trigger: AGGCTCTTTTTCAGCACTTCATGCACCAGAAGCTGG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATCACGCAGGTTAATTTaGCTGAACAATGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALSRRLI*LNNVTR
Trigger: TCTGGTGACATTGTTCAGTCAAATTAACCTGCGTGA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATCACGCAGGTTAATTTaGCTGAACAATGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKSRRLI*LNNVTR
Trigger: TCTGGTGACATTGTTCAGTCAAATTAACCTGCGTGA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAAGCACCAACACGTTTaGAGCTTCTGTAAATCGTCA +
Preference number: 4 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQKHQHV*SFCKSS
Trigger: TGACGATTTACAGAAGCTTCAAACGTGTTGGTGCTT...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAAAGCACCAACACGTTTaGAGCTTCTGTAAATCGTCA +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALKHQHV*SFCKSS
Trigger: TGACGATTTACAGAAGCTTCAAACGTGTTGGTGCTT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAGCTGGGCATCTCTTCTaGGTCTTCTTCCGCATTCAT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELAGHLF*VFFRIH
Trigger: ATGAATGCGGAAGAAGACTCAGAAGAGATGCCCAGC...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACTTTCCTTTCTTGTCTaGAGGTGTGCTGGACACCTC +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELLSFLV*RCAGHL
Trigger: GAGGTGTCCAGCACACCTTCAGACAAGAAAGGAAAG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACGTGGAGTTACAAGTTaGGTCATCTTTCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALRGVTS*VIFLLR
Trigger: CCTCAAAAGAAAGATGACTCAACTTGTAACTCCACG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACGTGGAGTTACAAGTTaGGTCATCTTTCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKRGVTS*VIFLLR
Trigger: CCTCAAAAGAAAGATGACTCAACTTGTAACTCCACG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGCGTGGAGTTACAAGTTaGGTCATCTTTCTTTTGAGG +
Preference number: 4 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQRGVTS*VIFLLR
Trigger: CCTCAAAAGAAAGATGACTCAACTTGTAACTCCACG...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATTTGGACCCTCATCATaGCCTCTGAGTTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELFGPSS*PLSSRL
Trigger: CAACCTGGAACTCAGAGGTCATGATGAGGGTCCAAA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACCGTCATTGGCTTCATaGAAACCGAGCACGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELPSLAS*KPSTSL
Trigger: CAAAGACGTGCTCGGTTTTCATGAAGCCAATGACGG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACTCATGGATGATGCCTaGATTCTTGATCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKLMDDA*ILDPQN
Trigger: ATTCTGTGGATCAAGAATTCAGGCATCATCCATGAG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACATTTGGGAAAGATGTaGACTACTGTGGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELHLGKM*TTVARG
Trigger: CCCTCTGGCCACAGTAGTTCACATCTTTCCCAAATG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACTAGCAACATGTGCTTaGCTGGATTTCAGAATTGCT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKLATCA*LDFRIA
Trigger: AGCAATTCTGAAATCCAGTCAAGCACATGTTGCTAG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAAAGACACACTTCAGTTaGCTGAAAGGCAGAGCAAAA +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALKTHFS*LKGRAK
Trigger: TTTTGCTCTGCCTTTCAGTCAACTGAAGTGTGTCTT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAAAGACACACTTCAGTTaGCTGAAAGGCAGAGCAAAA +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKKTHFS*LKGRAK
Trigger: TTTTGCTCTGCCTTTCAGTCAACTGAAGTGTGTCTT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATGGGTGAGAATGTTGTaGACCACTCTGGATACAGGG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELWVRML*TTLDTG
Trigger: CCCTGTATCCAGAGTGGTGCACAACATTCTCACCCA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGAGAGGAGTGTCCTTTaGATTTGGGAAAGATGTGAA +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKERSVL*IWERCE
Trigger: TTCACATCTTTCCCAAATGCAAAGGACACTCCTCTC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATGTTGTGCACCACTCTaGATACAGGGATCAAATTTC +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALCCAPL*IQGSNF
Trigger: GAAATTTGATCCCTGTATCCAGAGTGGTGCACAACA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAATCTCATCGCTTTGCTaGGAGGATGTTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELISSLC*EDVPGS
Trigger: TGAGCCTGGAACATCCTCCCAGCAAAGCGATGAGAT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAATTATCTCTTATCTCTaGCATAGAGCCCAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALIISYL*HRAQGR
Trigger: TCTCCCTTGGGCTCTATGCCAGAGATAAGAGATAAT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAACATCCCAGACTCACTaGCAATCAACAGTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELTSQTH*QSTVQA
Trigger: GGCTTGGACTGTTGATTGCCAGTGAGTCTGGGATGT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATTCATCACTGACTGTTaGCAGCAGGGAAGAAACAAT +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALFITDC*QQGRNN
Trigger: ATTGTTTCTTCCCTGCTGCCAACAGTCAGTGATGAA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATGGCTCTTGTCATGGTaGACATCCTGGACTTTGAGT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELWLLSW*TSWTLS
Trigger: ACTCAAAGTCCAGGATGTTCACCATGACAAGAGCCA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATGGTGCATGAAGTGCTaGAAAAGAGCCTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELWCMKC*KRASSM
Trigger: CATGGAAGAGGCTCTTTTTCAGCACTTCATGCACCA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAGAGTGGGGCATCTCTTaGGGGTCTTCTTTATCTCTT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELEWGIS*GSSLSL
Trigger: AAGAGATAAAGAAGACCCTCAAGAGATGCCCCACTC...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACCTGATCCACCCTTTTaGGCTTCTTTTGGATTCCGT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELPDPPF*ASFGFR
Trigger: ACGGAATCCAAAAGAAGCTCAAAAGGGTGGATCAGG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAATCAATGATCTCCTCTaGTCTCGACTTTCGGGCACA +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELINDLL*SRLSGT
Trigger: TGTGCCCGAAAGTCGAGATCAGAGGAGATCATTGAT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAGAGTCGTCTTTCCTTTaGGTCACCTTATCCACCACT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELESSFL*VTLSTT
Trigger: AGTGGTGGATAAGGTGACTCAAAGGAAAGACGACTC...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAGGTGTGATAATCCTATaGAGTGTCTGGGTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELGVIIL*SVWVWV
Trigger: GACCCAAACCCAGACACTTCATAGGATTATCACACC...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAATTGCTATAAATGAGTaGCTGCTGCTTCCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALIAINE*LLLPFS
Trigger: GGAAAAAGGAAGCAGCAGTCACTCATTTATAGCAAT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATGGGGATTGAGCAAGTaGGTAAATAATACTGTTGGA +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALWGLSK*VNNTVG
Trigger: TCCAACAGTATTATTTACTCACTTGCTCAATCCCCA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACATCCTCATTCCGAATaGACTTCACTGAGGATCCGT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELHPHSE*TSLRIR
Trigger: ACGGATCCTCAGTGAAGTGCATTCGGAATGAGGATG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATCAAGGAAAATTTCCTaGCCTGGGATTAGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELSRKIS*PGIRGN
Trigger: GTTCCCCCTAATCCCAGGGCAGGAAATTTTCCTTGA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAATGTTAACTTGTCATTaGTCACTGAAGTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEMLTCH*SLKCFF
Trigger: GAAGAAGCACTTCAGTGACCAATGACAAGTTAACAT...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACTTTTGAGCTTCTTTTaGATTCCGTGTCTAGATGAG +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLLSFF*IPCLDE
Trigger: CTCATCTAGACACGGAATCCAAAAGAAGCTCAAAAG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAACCTTATCCACCACTTaGAGCTTCTCTTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELTLSTT*SFSWMP
Trigger: TGGCATCCAAGAGAAGCTCCAAGTGGTGGATAAGGT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATCTCCTTTTTGGAGTTaGCCAGATACATCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKSPFWS*PDTSFS
Trigger: AGAAAAAGATGTATCTGGTCAACTCCAAAAAGGAGA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAGGGAGCTTAGAACAGTaGAAATCCACAGTGTCACTT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELGSLEQ*KSTVSL
Trigger: AAGTGACACTGTGGATTTTCACTGTTCTAAGCTCCC...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACCGAATGCACTTCACTaGGGATCCGTGTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELPNALH*GSVFHF
Trigger: AAAATGAAACACGGATCCTCAGTGAAGTGCATTCGG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACGAAGAAGCTTTATCTaGTCTGAACCTGATTTAGAT +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKRRSFI*SEPDLD
Trigger: ATCTAAATCAGGTTCAGATCAGATAAAGCTTCTTCG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAATCCTGAGGTGGGGATaGTTCAGTCTTTACAGAACA +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELILRWG*FSLYRT
Trigger: TGTTCTGTAAAGACTGAAGCATCCCCACCTCAGGAT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAATCACTCCTCAAGATTaGGAGAGTTACAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELITPQD*ESYREM
Trigger: CATCTCCCTGTAACTCTCCCAATCTTGAGGAGTGAT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAATGTTAACTTGTCATTaGTCACTGAAGTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKMLTCH*SLKCFF
Trigger: GAAGAAGCACTTCAGTGACCAATGACAAGTTAACAT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACCCTTGTCTCTACCGTaGAGTTACAAGTTGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELPLSLP*SYKLSH
Trigger: ATGACTCAACTTGTAACTCCACGGTAGAGACAAGGG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAAGCAAAAAGGAAGTATaGAGAAGTCGTGTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: KDRNKGAERYQSDKRIALSKKEV*RSRVKK
Trigger: TTTCTTGACACGACTTCTCCATACTTCCTTTTTGCT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAAAGCACCAACACGTTTaGAGCTTCTGTAAATCGTCA +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELKHQHV*SFCKSS
Trigger: TGACGATTTACAGAAGCTTCAAACGTGTTGGTGCTT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAAGATTGTGGCAGAAGTaGCAGTGTGCAAGTATGAAT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELRLWQK*QCASMN
Trigger: ATTCATACTTGCACACTGTCACTTCTGCCACAATCT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATGTTGTGCACCACTCTaGATACAGGGATCAAATTTC +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELCCAPL*IQGSNF
Trigger: GAAATTTGATCCCTGTATCCAGAGTGGTGCACAACA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATTAGTTCTTGCCTTTTaGACCCTCATCATGACCTCT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELLVLAF*TLIMTS
Trigger: AGAGGTCATGATGAGGGTCCAAAAGGCAAGAACTAA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATTCATCACTGACTGTTaGCAGCAGGGAAGAAACAAT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELFITDC*QQGRNN
Trigger: ATTGTTTCTTCCCTGCTGCCAACAGTCAGTGATGAA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAAGAAAGCAGATAATGTaGTTACCACTGTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELRKQIM*LPLSLQ
Trigger: CTGGAGAGACAGTGGTAACCACATTATCTGCTTTCT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAAACCGAGCACGTCTTTaGGATCTTTTTCAAATTCTG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELNRARL*DLFQIL
Trigger: CAGAATTTGAAAAAGATCTCAAAGACGTGCTCGGTT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATGGGGATTGAGCAAGTaGGTAAATAATACTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELWGLSK*VNNTVG
Trigger: TCCAACAGTATTATTTACTCACTTGCTCAATCCCCA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATCTTTATCTCTTATTTaGGGGATCAGGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELSLSLI*GIRLSL
Trigger: CAGTGACAACCTGATCCCCCAAATAAGAGATAAAGA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACTTTTGAGCTTCTTTTaGATTCCGTGTCTAGATGAG +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELLLSFF*IPCLDE
Trigger: CTCATCTAGACACGGAATCCAAAAGAAGCTCAAAAG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATCTCCTTTTTGGAGTTaGCCAGATACATCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELSPFWS*PDTSFS
Trigger: AGAAAAAGATGTATCTGGTCAACTCCAAAAAGGAGA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR TCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACGAAGAAGCTTTATCTaGTCTGAACCTGATTTAGAT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELRRSFI*SEPDLD
Trigger: ATCTAAATCAGGTTCAGATCAGATAAAGCTTCTTCG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR GCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAAAAATGTTTTATGGTTaGGAAACATCAGGCGCATGT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELKMFYG*ETSGAC
Trigger: ACATGCGCCTGATGTTTCGCAACCATAAAACATTTT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CCA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAACCATCAAAGAGTTCTaGGGTCATTTCAAAACAACT +
Preference number: 4 (lower is better)
Translates to: LNKSTLKRLMRQWGECELTIKEF*GHFKTT
Trigger: AGTTGTTTTGAAATGACCCCAGAACTCTTTGATGGT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS TCA 90 bp TCTTCCGTGGCCTCGTGGGGCTGGCTCTGCTCCTCCTCCCTTGACTaGGAGACGTCATGGAGATTGGGTGGAGGGAGGACTGTAGAGTTG +
Preference number: 5 (lower is better)
Translates to: SSVASWGWLCSSSLD*ETSWRLGGGRTVEL
Trigger: CAACTCTACAGTCCTCCCTCCACCCAATCTCCATGACGTCTCTCAGTCAAGGGAGGAGGAGCAGAGCCAGCCCCACGAGGCCACGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540870.5
CDS GCA 90 bp CTGGCTGTGGCTTGCCAACAGGTTCTGCTGCGTTTTGAGCTGTGCTaGTGCCTGCTGGCAAGCTTGTGCTTTGAGCTGGGCCACTCTGGG +
Preference number: 5 (lower is better)
Translates to: LAVACQQVLLRFELC*CLLASLCFELGHSG
Trigger: CCCAGAGTGGCCCAGCTCAAAGCACAAGCTTGCCAGCAGGCAGCAGCACAGCTCAAAACGCAGCAGAACCTGTTGGCAAGCCACAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS GCA 90 bp GGTGGTGACCGCCGCCACCAGGACTTTTCTTCTCTGGCTGTGGCTTaGCAACAGGTTCTGCTGCGTTTTGAGCTGTGCTGCTGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GGDRRHQDFSSLAVA*QQVLLRFELCCCLL
Trigger: CAGCAGGCAGCAGCACAGCTCAAAACGCAGCAGAACCTGTTGGCAAGCCACAGCCAGAGAAGAAAAGTCCTGGTGGCGGCGGTCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS GCA 90 bp ACAGGGTCAGATGGGCTGGGCGACTCACTCAGGATCTCATCGCTTTaGTGGGAGGATGTTCCAGGCTCACTGACTCTTGGCGCACAGGGT +
Preference number: 5 (lower is better)
Translates to: TGSDGLGDSLRISSL*WEDVPGSLTLGAQG
Trigger: ACCCTGTGCGCCAAGAGTCAGTGAGCCTGGAACATCCTCCCAGCAAAGCGATGAGATCCTGAGTGAGTCGCCCAGCCCATCTGACCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000455674.2
ENST00000462232.1
ENST00000486146.2
ENST00000540870.5
CDS CCA 90 bp GGGTCAGATGGGCTGGGCGACTCACTCAGGATCTCATCGCTTTGCTaGGAGGATGTTCCAGGCTCACTGACTCTTGGCGCACAGGGTGAA +
Preference number: 5 (lower is better)
Translates to: GSDGLGDSLRISSLC*EDVPGSLTLGAQGE
Trigger: TTCACCCTGTGCGCCAAGAGTCAGTGAGCCTGGAACATCCTCCCAGCAAAGCGATGAGATCCTGAGTGAGTCGCCCAGCCCATCTGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000455674.2
ENST00000462232.1
ENST00000486146.2
ENST00000540870.5
CDS CCA 90 bp CTTGCCAACAGGTTCTGCTGCGTTTTGAGCTGTGCTGCTGCCTGCTaGCAAGCTTGTGCTTTGAGCTGGGCCACTCTGGGCGCATTTGCT +
Preference number: 5 (lower is better)
Translates to: LANRFCCVLSCAAAC*QACALSWATLGAFA
Trigger: AGCAAATGCGCCCAGAGTGGCCCAGCTCAAAGCACAAGCTTGCCAGCAGGCAGCAGCACAGCTCAAAACGCAGCAGAACCTGTTGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS CCA 90 bp CACCTCGCATTCATCCGAGTTTTTCCGCTGCAAGGGCAGATAACGTaGGCACCGCTAGGACCATGGAGACCCACGAATGCTGACCCTGTG +
Preference number: 5 (lower is better)
Translates to: HLAFIRVFPLQGQIT*APLGPWRPTNADPV
Trigger: CACAGGGTCAGCATTCGTGGGTCTCCATGGTCCTAGCGGTGCCCACGTTATCTGCCCTTGCAGCGGAAAAACTCGGATGAATGCGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS TCA 90 bp CACTCAGGATCTCATCGCTTTGCTGGGAGGATGTTCCAGGCTCACTaGCTCTTGGCGCACAGGGTGAACAGCTTGGTTGAGGGGGTTGTG +
Preference number: 5 (lower is better)
Translates to: HSGSHRFAGRMFQAH*LLAHRVNSLVEGVV
Trigger: CACAACCCCCTCAACCAAGCTGTTCACCCTGTGCGCCAAGAGTCAGTGAGCCTGGAACATCCTCCCAGCAAAGCGATGAGATCCTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000455674.2
ENST00000462232.1
ENST00000540870.5
CDS TCA 90 bp CTGAAAGGGCTCACCGTAATCTCGAATCCGGTATCCCAGAGCCCGTaGGCAGTGGGGTGGAGTTTGAACCAGGTAGTCCCTCTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: LKGLTVISNPVSQSP*AVGWSLNQVVPLQS
Trigger: ACTCTGGAGAGGGACTACCTGGTTCAAACTCCACCCCACTGCTCACGGGCTCTGGGATACCGGATTCGAGATTACGGTGAGCCCTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480916.1
CDS GCA 90 bp GCCACCAGGACTTTTCTTCTCTGGCTGTGGCTTGCCAACAGGTTCTaGTGCGTTTTGAGCTGTGCTGCTGCCTGCTGGCAAGCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: ATRTFLLWLWLANRF*CVLSCAAACWQACA
Trigger: AGCACAAGCTTGCCAGCAGGCAGCAGCACAGCTCAAAACGCAGCAGAACCTGTTGGCAAGCCACAGCCAGAGAAGAAAAGTCCTGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS CCA 90 bp CCCTGGGGGAAATTGCAAGACAAATGGCACAACAAGCAGAGAGTCTaGGTGGTGACCGCCGCCACCAGGACTTTTCTTCTCTGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PWGKLQDKWHNKQRV*VVTAATRTFLLWLW
Trigger: CCACAGCCAGAGAAGAAAAGTCCTGGTGGCGGCGGTCACCACCCAGACTCTCTGCTTGTTGTGCCATTTGTCTTGCAATTTCCCCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS TCA 90 bp TGGAAGACTCGTGGACAAGTACCGCAGCAGAGAAGTTGTCCCCCTTaGCAGCACACCTCGCATTCATCCGAGTTTTTCCGCTGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: WKTRGQVPQQRSCPP*QHTSHSSEFFRCKG
Trigger: GCCCTTGCAGCGGAAAAACTCGGATGAATGCGAGGTGTGCTGTCAAGGGGGACAACTTCTCTGCTGCGGTACTTGTCCACGAGTCTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS CCA 90 bp GAGGCCTGGACTTTGAGTTTGTCGTTCCTGCCCCTTTCCAGGGGCTaGGACAGGGATCACTCCTCAAGATTGGGAGAGTTACAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: EAWTLSLSFLPLSRG*DRDHSSRLGELQGD
Trigger: ATCTCCCTGTAACTCTCCCAATCTTGAGGAGTGATCCCTGTCCCAGCCCCTGGAAAGGGGCAGGAACGACAAACTCAAAGTCCAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455674.2
CDS TCA 90 bp TGGAAGACTCGTGGACAAGTACCGCAGCAGAGAAGTTGTCCCCCTTaGCAGCACACCTCGCATTCATCCGAGTTTTTCCGCTTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WKTRGQVPQQRSCPP*QHTSHSSEFFRFSS
Trigger: GCTGCTGAAGCGGAAAAACTCGGATGAATGCGAGGTGTGCTGTCAAGGGGGACAACTTCTCTGCTGCGGTACTTGTCCACGAGTCTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS TCA 90 bp GCAGATAACGTGGGCACCGCTAGGACCATGGAGACCCACGAATGCTaGCCCTGTGGGGTTCTAGAACACATCATTTTTGTGTGTGCCAGA +
Preference number: 5 (lower is better)
Translates to: ADNVGTARTMETHEC*PCGVLEHIIFVCAR
Trigger: TCTGGCACACACAAAAATGATGTGTTCTAGAACCCCACAGGGTCAGCATTCGTGGGTCTCCATGGTCCTAGCGGTGCCCACGTTATCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS CCA 90 bp ACATCCTGGACTTTGAGTTTGTCGTTCCTGCCCCTTTCCAGGGGCTaGGACAGGGATCACTCCTCAAGATTGGGAGAGTTACAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: TSWTLSLSFLPLSRG*DRDHSSRLGELQGD
Trigger: ATCTCCCTGTAACTCTCCCAATCTTGAGGAGTGATCCCTGTCCCAGCCCCTGGAAAGGGGCAGGAACGACAAACTCAAAGTCCAGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
CDS CCA 90 bp GATTCCTGGACTTTGAGTTTGTCGTTCCTGCCCCTTTCCAGGGGCTaGGACAGGGATCACTCCTCAAGATTGGGAGAGTTACAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: DSWTLSLSFLPLSRG*DRDHSSRLGELQGD
Trigger: ATCTCCCTGTAACTCTCCCAATCTTGAGGAGTGATCCCTGTCCCAGCCCCTGGAAAGGGGCAGGAACGACAAACTCAAAGTCCAGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462232.1
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGGGAGGACTGTAGAGTaGGTGCACCCACGTCAGCTA +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMGRTVE*VHPRQL
Trigger: TAGCTGACGTGGGTGCACCAACTCTACAGTCCTCCC...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540870.5
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGGGCTTCAAGTAGGATaGGTGTGTCTCTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMGLQVG*VCLCSA
Trigger: GGCAGAGCAGAGACACACCAATCCTACTTGAAGCCC...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGCAGGATCTCATCGCTTaGCTGGGAGGATGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVQDLIA*LGGCSR
Trigger: CCTGGAACATCCTCCCAGCAAAGCGATGAGATCCTG...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGCAGGATCTCATCGCTTaGCTGGGAGGATGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMQDLIA*LGGCSR
Trigger: CCTGGAACATCCTCCCAGCAAAGCGATGAGATCCTG...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGGTTGTCACTGGCCACTaGCACAGTGCTAGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVVVTGH*HSASEE
Trigger: CTCCTCACTAGCACTGTGCAAGTGGCCAGTGACAAC...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTTGTCACTGGCCACTaGCACAGTGCTAGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMVVTGH*HSASEE
Trigger: CTCCTCACTAGCACTGTGCAAGTGGCCAGTGACAAC...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTATCGCCTTTTGGGCCCTaGTCTCTACCGTGGAGTTAC +
Preference number: 5 (lower is better)
Translates to: DAMPKCGGDSELGNSEALSPFGP*SLPWSY
Trigger: GTAACTCCACGGTAGAGACAAGGGCCCAAAAGGCGA...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTCGCCTTTTGGGCCCTaGTCTCTACCGTGGAGTTAC +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVSPFGP*SLPWSY
Trigger: GTAACTCCACGGTAGAGACAAGGGCCCAAAAGGCGA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGGAGACGTCATGGAGATaGGGTGGAGGGAGGACTGTA +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVETSWR*GGGRTV
Trigger: TACAGTCCTCCCTCCACCCAATCTCCATGACGTCTC...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540870.5
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTCTGCTCCTCCTCCCTaGACTGAGAGACGTCATGGA +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVSAPPP*TERRHG
Trigger: TCCATGACGTCTCTCAGTCAAGGGAGGAGGAGCAGA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540870.5
CDS CCA 90 bp GAGGCTGCCCCTTGTGTGACCCTTCGTGGTGTACTAGGCGTCTTCTaGGACCTCTTTCCTTCATTCATTTCTGAAGTGCCATCAATGATC +
Preference number: 5 (lower is better)
Translates to: EAAPCVTLRGVLGVF*DLFPSFISEVPSMI
Trigger: GATCATTGATGGCACTTCAGAAATGAATGAAGGAAAGAGGTCCCAGAAGACGCCTAGTACACCACGAAGGGTCACACAAGGGGCAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTCCTGGACTTTGAGTTaGTCGTTCCTGCCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMSWTLS*SFLPLS
Trigger: GGAAAGGGGCAGGAACGACAAACTCAAAGTCCAGGA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGGGGCTTCAAGTAGGATaGGTGTGTCTCTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKGLQVG*VCLCSA
Trigger: GGCAGAGCAGAGACACACCAATCCTACTTGAAGCCC...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGCTTCTGCTAGGCCAGTaGGGGCTTCAAGTAGGATTG +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMLLLGQ*GLQVGL
Trigger: CAATCCTACTTGAAGCCCCAACTGGCCTAGCAGAAG...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCAGGATCTCATCGCTTaGCTGGGAGGATGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKQDLIA*LGGCSR
Trigger: CCTGGAACATCCTCCCAGCAAAGCGATGAGATCCTG...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGATTTGGGGGATCAGGTaGTCACTGGCCACTTGCACA +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVIWGIR*SLATCT
Trigger: TGTGCAAGTGGCCAGTGACAACCTGATCCCCCAAAT...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTTCAGTTCTCGCCTTTaGGGCCCTTGTCTCTACCGT +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVFSSRL*GPCLYR
Trigger: ACGGTAGAGACAAGGGCCCAAAAGGCGAGAACTGAA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGCACCTTATCCACCACTaGGAGCTTCTCTTGGATGCC +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVHLIHH*ELLLDA
Trigger: GGCATCCAAGAGAAGCTCCAAGTGGTGGATAAGGTG...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGCACCTTATCCACCACTaGGAGCTTCTCTTGGATGCC +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMHLIHH*ELLLDA
Trigger: GGCATCCAAGAGAAGCTCCAAGTGGTGGATAAGGTG...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTTCCACCCTCTTTCCTaGGCAGGAACAAGTGACCCT +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMFHPLS*AGTSDP
Trigger: AGGGTCACTTGTTCCTGCCAAGGAAAGAGGGTGGAA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540870.5
CDS TCA 90 bp ACCCTCATCATGACCTCTGAGTTCCAGGTTGAGTCGTCTTTCCTTTaGGTCACCTTATCCACCACTTGGAGCTTCTCTTGGATGCCATGC +
Preference number: 5 (lower is better)
Translates to: TLIMTSEFQVESSFL*VTLSTTWSFSWMPC
Trigger: GCATGGCATCCAAGAGAAGCTCCAAGTGGTGGATAAGGTGACTCAAAGGAAAGACGACTCAACCTGGAACTCAGAGGTCATGATGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGTTGTCACTGGCCACTaGCACAGTGCTAGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: FEDAMPKCGGDSELGNSEVVTGH*HSASEE
Trigger: CTCCTCACTAGCACTGTGCAAGTGGCCAGTGACAAC...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAATCGCCTTTTGGGCCCTaGTCTCTACCGTGGAGTTAC +
Preference number: 5 (lower is better)
Translates to: FEDAMPKCGGDSELGNSESPFGP*SLPWSY
Trigger: GTAACTCCACGGTAGAGACAAGGGCCCAAAAGGCGA...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGTTCAGTTCTCGCCTTTaGGGCCCTTGTCTCTACCGT +
Preference number: 5 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKFSSRL*GPCLYR
Trigger: ACGGTAGAGACAAGGGCCCAAAAGGCGAGAACTGAA...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGCCTCTGAGTTCCAGGTaGAGTCGTCTTTCCTTTGAG +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVPLSSR*SRLSFE
Trigger: CTCAAAGGAAAGACGACTCAACCTGGAACTCAGAGG...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGCCTCTGAGTTCCAGGTaGAGTCGTCTTTCCTTTGAG +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMPLSSR*SRLSFE
Trigger: CTCAAAGGAAAGACGACTCAACCTGGAACTCAGAGG...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS GCA 90 bp GTACATTTCCGTAATCAGCCTTTCCTTAACCAGGTCCAACCACATTaGTTCCTGAAAGGGCTCACCGTAATCTCGAATCAGCTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: VHFRNQPFLNQVQPH*FLKGLTVISNQLVL
Trigger: CAGGACCAGCTGATTCGAGATTACGGTGAGCCCTTTCAGGAAGCAATGTGGTTGGACCTGGTTAAGGAAAGGCTGATTACGGAAATGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358662.9
CDS GCA 90 bp GTACATTTCCGTAATCAGCCTTTCCTTAACCAGGTCCAACCACATTaGTTCCTGAAAGGGCTCACCGTAATCTCGAATCCGGTATCCCAG +
Preference number: 5 (lower is better)
Translates to: VHFRNQPFLNQVQPH*FLKGLTVISNPVSQ
Trigger: CTGGGATACCGGATTCGAGATTACGGTGAGCCCTTTCAGGAAGCAATGTGGTTGGACCTGGTTAAGGAAAGGCTGATTACGGAAATGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480916.1
CDS GCA 90 bp ATGGAAGGTGAGGCTGAGACCCAGAGGAGGTGCAATGCCAGAGGGTaGAGAGGTGAGTTTGCTTCATTGTGGAAAAAGAACACAATTTTC +
Preference number: 5 (lower is better)
Translates to: MEGEAETQRRCNARG*RGEFASLWKKNTIF
Trigger: GAAAATTGTGTTCTTTTTCCACAATGAAGCAAACTCACCTCTGCACCCTCTGGCATTGCACCTCCTCTGGGTCTCAGCCTCACCTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486146.2
CDS-3UTR CAA 90 bp GATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTCTAGATCACTCCTCAAGATaGGGAGAGTTACAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: DAMPKCGGDSELGNSEALDHSSR*GELQGD
Trigger: ATCTCCCTGTAACTCTCCCAATCTTGAGGAGTGATC...TAGAGCTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGAGTTGGGTGAGAATGTaGTGCACCACTCTGGATACA +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMSWVRM*CTTLDT
Trigger: TGTATCCAGAGTGGTGCACAACATTCTCACCCAACT...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGAAAAGTCCTCTCCAGTaGGGTGAGAATGTTGTGCAC +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVKSPLQ*GENVVH
Trigger: GTGCACAACATTCTCACCCAACTGGAGAGGACTTTT...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAATTTGGGGGATCAGGTaGTCACTGGCCACTTGCACA +
Preference number: 5 (lower is better)
Translates to: FEDAMPKCGGDSELGNSEIWGIR*SLATCT
Trigger: TGTGCAAGTGGCCAGTGACAACCTGATCCCCCAAAT...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGAGAGTGGGGCATCTCTaGAGGGTCTTCTTTATCTCT +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMRVGHL*RVFFIS
Trigger: AGAGATAAAGAAGACCCTCAAGAGATGCCCCACTCT...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCCTCTGAGTTCCAGGTaGAGTCGTCTTTCCTTTGAG +
Preference number: 5 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKPLSSR*SRLSFE
Trigger: CTCAAAGGAAAGACGACTCAACCTGGAACTCAGAGG...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS TCA 90 bp TGCAATCAACTAGATAAAGCTGGGGAAATCCTAGAGCTTATTTCCTaGTTTTCGTTTGTGTCGGCCTGCACCACGAGGTGGCCACACAGT +
Preference number: 5 (lower is better)
Translates to: CNQLDKAGEILELIS*FSFVSACTTRWPHS
Trigger: ACTGTGTGGCCACCTCGTGGTGCAGGCCGACACAAACGAAAATCAGGAAATAAGCTCTAGGATTTCCCCAGCTTTATCTAGTTGATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486146.2
CDS GCA 90 bp TGTTTTATGGTTGCGAAACATCAGGCGCATGTCTCGCACAAACCATaGCACCGTGTACATTTCCGTAATCAGCCTTTCCTTAACCAGGTC +
Preference number: 5 (lower is better)
Translates to: CFMVAKHQAHVSHKP*HRVHFRNQPFLNQV
Trigger: GACCTGGTTAAGGAAAGGCTGATTACGGAAATGTACACGGTGGCATGGTTTGTGCGAGACATGCGCCTGATGTTTCGCAACCATAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258381.11
ENST00000358662.9
ENST00000463022.1
ENST00000480916.1
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTTAGTGATGATGGAGTaGTCTAGGAGGCCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMLVMME*SRRPSK
Trigger: CTTTGAAGGCCTCCTAGACAACTCCATCATCACTAA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGAAAAGTCCTCTCCAGTaGGGTGAGAATGTTGTGCAC +
Preference number: 5 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKKSPLQ*GENVVH
Trigger: GTGCACAACATTCTCACCCAACTGGAGAGGACTTTT...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGAGAGTGGGGCATCTCTaGAGGGTCTTCTTTATCTCT +
Preference number: 5 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKRVGHL*RVFFIS
Trigger: AGAGATAAAGAAGACCCTCAAGAGATGCCCCACTCT...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGCTCTTCTGGGTCATTaGGTTCTGGAGAATTATCTC +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMALLGH*VLENYL
Trigger: GAGATAATTCTCCAGAACCAAATGACCCAGAAGAGC...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGCTTTTCTTTCCTTTCTaGTCTGAAGGTGTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMLFFPF*SEGVLD
Trigger: GTCCAGCACACCTTCAGACAAGAAAGGAAAGAAAAG...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTTTAGTTCTTGCCTTTaGGACCCTCATCATGACCTC +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVFSSCL*DPHHDL
Trigger: GAGGTCATGATGAGGGTCCAAAAGGCAAGAACTAAA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAACCGCAGCAGAGAAGTaGTCCCCCTTGACAGCACAC +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALTAAEK*SPLTAH
Trigger: GTGTGCTGTCAAGGGGGACAACTTCTCTGCTGCGGT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS TCA 90 bp TCCAGAAACCGCCGTCATTGGCTTCATGAAAACCGAGCACGTCTTTaGGATCTTTTTCAAATTCTGCCTCTAAGTCAAGTCCTACCTGGC +
Preference number: 5 (lower is better)
Translates to: SRNRRHWLHENRARL*DLFQILPLSQVLPG
Trigger: GCCAGGTAGGACTTGACTTAGAGGCAGAATTTGAAAAAGATCTCAAAGACGTGCTCGGTTTTCATGAAGCCAATGACGGCGGTTTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258381.11
ENST00000358662.9
ENST00000463022.1
ENST00000477068.1
ENST00000480916.1
ENST00000483067.1
CDS TCA 90 bp GAACAGGGTCAAGGAAGAGTCCAGAAACCGCCGTCATTGGCTTCATaGAAACCGAGCACGTCTTTGAGATCTTTTTCAAATTCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: EQGQGRVQKPPSLAS*KPSTSLRSFSNSAS
Trigger: AGAGGCAGAATTTGAAAAAGATCTCAAAGACGTGCTCGGTTTTCATGAAGCCAATGACGGCGGTTTCTGGACTCTTCCTTGACCCTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258381.11
ENST00000358662.9
ENST00000477068.1
ENST00000480916.1
ENST00000483067.1
CDS GCA 90 bp GTACATTTCCGTAATCAGCCTTTCCTTAACCAGGTCCAACCACATTaGTTCCTGAAAGGGCTCACCGTAATCTCGAATCTTGGGGACAAA +
Preference number: 5 (lower is better)
Translates to: VHFRNQPFLNQVQPH*FLKGLTVISNLGDK
Trigger: TTTGTCCCCAAGATTCGAGATTACGGTGAGCCCTTTCAGGAAGCAATGTGGTTGGACCTGGTTAAGGAAAGGCTGATTACGGAAATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463022.1
CDS-3UTR CAA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGTTAGTGATGATGGAGTaGTCTAGGAGGCCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKLVMME*SRRPSK
Trigger: CTTTGAAGGCCTCCTAGACAACTCCATCATCACTAA...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTTCACGCAGGTTAATTaGACTGAACAATGTCACCAG +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVFTQVN*TEQCHQ
Trigger: CTGGTGACATTGTTCAGTCAAATTAACCTGCGTGAA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTTCACGCAGGTTAATTaGACTGAACAATGTCACCAG +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMFTQVN*TEQCHQ
Trigger: CTGGTGACATTGTTCAGTCAAATTAACCTGCGTGAA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGGGCTTCAAGTAGGATaGGTGTGTCTCTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKGLQVG*VCLCSA
Trigger: GGCAGAGCAGAGACACACCAATCCTACTTGAAGCCC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGGGGCTTCAAGTAGGATaGGTGTGTCTCTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQGLQVG*VCLCSA
Trigger: GGCAGAGCAGAGACACACCAATCCTACTTGAAGCCC...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAGGGCTTCAAGTAGGATaGGTGTGTCTCTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALGLQVG*VCLCSA
Trigger: GGCAGAGCAGAGACACACCAATCCTACTTGAAGCCC...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAACTTCTGCTAGGCCAGTaGGGGCTTCAAGTAGGATTG +
Preference number: 5 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLELLLGQ*GLQVGL
Trigger: CAATCCTACTTGAAGCCCCAACTGGCCTAGCAGAAG...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAGTTGTCACTGGCCACTaGCACAGTGCTAGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALVVTGH*HSASEE
Trigger: CTCCTCACTAGCACTGTGCAAGTGGCCAGTGACAAC...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGCTTTTCTTTCCTTTCTaGTCTGAAGGTGTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKLFFPF*SEGVLD
Trigger: GTCCAGCACACCTTCAGACAAGAAAGGAAAGAAAAG...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATCGCCTTTTGGGCCCTaGTCTCTACCGTGGAGTTAC +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALSPFGP*SLPWSY
Trigger: GTAACTCCACGGTAGAGACAAGGGCCCAAAAGGCGA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAATTCAGTTCTCGCCTTTaGGGCCCTTGTCTCTACCGT +
Preference number: 5 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEFSSRL*GPCLYR
Trigger: ACGGTAGAGACAAGGGCCCAAAAGGCGAGAACTGAA...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGTTTAGTTCTTGCCTTTaGGACCCTCATCATGACCTC +
Preference number: 5 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKFSSCL*DPHHDL
Trigger: GAGGTCATGATGAGGGTCCAAAAGGCAAGAACTAAA...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAGAGAAGTTGTCCCCCTaGACAGCACACCTCGCATTC +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALEKLSP*TAHLAF
Trigger: GAATGCGAGGTGTGCTGTCAAGGGGGACAACTTCTC...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGAGAAGTTGTCCCCCTaGACAGCACACCTCGCATTC +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKEKLSP*TAHLAF
Trigger: GAATGCGAGGTGTGCTGTCAAGGGGGACAACTTCTC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACCAGGTCCAACCACATaGCTTCCTGAAAGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALPGPTT*LPERAH
Trigger: GTGAGCCCTTTCAGGAAGCAATGTGGTTGGACCTGG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTTTGATCTGCTTGAGTaGAATGACTTTTCCACCCTC +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMFDLLE*NDFSTL
Trigger: GAGGGTGGAAAAGTCATTCAACTCAAGCAGATCAAA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540870.5
CDS GCA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTaGAACATGGTGACTGAGAGGGTAGTAGAAATTCACTTGCTATTT +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKV*NMVTERVVEIHLLF
Trigger: AAATAGCAAGTGAATTTCTACTACCCTCTCAGTCACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS CCA 90 bp ACAAAGCCACCAGAGGTGACGTTAGCACAGCTGTCATCACTGGAATaGATCCAACTTAAATACAATCCAAGCCTTCATTTCCAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: TKPPEVTLAQLSSLE*IQLKYNPSLHFQGH
Trigger: ATGACCCTGGAAATGAAGGCTTGGATTGTATTTAAGTTGGATCCATTCCAGTGATGACAGCTGTGCTAACGTCACCTCTGGTGGCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463022.1
CDS CCA 90 bp CAAGTTTTACCTTGTGTGACCCTTCGTGGTGTACTAGGCGTCTTCTaGGACCTCTTTCCTTCATTCATTTCTGAAGTGCCATCAATGATC +
Preference number: 5 (lower is better)
Translates to: QVLPCVTLRGVLGVF*DLFPSFISEVPSMI
Trigger: GATCATTGATGGCACTTCAGAAATGAATGAAGGAAAGAGGTCCCAGAAGACGCCTAGTACACCACGAAGGGTCACACAAGGTAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490880.5
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATCCTGGACTTTGAGTTaGTCGTTCCTGCCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALSWTLS*SFLPLS
Trigger: GGAAAGGGGCAGGAACGACAAACTCAAAGTCCAGGA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACTTCTGCTAGGCCAGTaGGGGCTTCAAGTAGGATTG +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKLLLGQ*GLQVGL
Trigger: CAATCCTACTTGAAGCCCCAACTGGCCTAGCAGAAG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACTTCTGCTAGGCCAGTaGGGGCTTCAAGTAGGATTG +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALLLLGQ*GLQVGL
Trigger: CAATCCTACTTGAAGCCCCAACTGGCCTAGCAGAAG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGGATGTTAACTTGTCATaGGTCACTGAAGTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVDVNLS*VTEVLL
Trigger: AAGAAGCACTTCAGTGACCAATGACAAGTTAACATC...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGATGTTAACTTGTCATaGGTCACTGAAGTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMDVNLS*VTEVLL
Trigger: AAGAAGCACTTCAGTGACCAATGACAAGTTAACATC...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAATTTGGGGGATCAGGTaGTCACTGGCCACTTGCACA +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKIWGIR*SLATCT
Trigger: TGTGCAAGTGGCCAGTGACAACCTGATCCCCCAAAT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGATTTGGGGGATCAGGTaGTCACTGGCCACTTGCACA +
Preference number: 5 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQIWGIR*SLATCT
Trigger: TGTGCAAGTGGCCAGTGACAACCTGATCCCCCAAAT...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTTCTTTATCTCTTATTaGGGGGATCAGGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMFFISY*GDQVVT
Trigger: AGTGACAACCTGATCCCCCAAATAAGAGATAAAGAA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTCTTATGTCTCCTTTTaGGAGTTGACCAGATACATC +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVSYVSF*ELTRYI
Trigger: GATGTATCTGGTCAACTCCAAAAAGGAGACATAAGA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATTCAGTTCTCGCCTTTaGGGCCCTTGTCTCTACCGT +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALFSSRL*GPCLYR
Trigger: ACGGTAGAGACAAGGGCCCAAAAGGCGAGAACTGAA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACACCTTATCCACCACTaGGAGCTTCTCTTGGATGCC +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKHLIHH*ELLLDA
Trigger: GGCATCCAAGAGAAGCTCCAAGTGGTGGATAAGGTG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGCACCTTATCCACCACTaGGAGCTTCTCTTGGATGCC +
Preference number: 5 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQHLIHH*ELLLDA
Trigger: GGCATCCAAGAGAAGCTCCAAGTGGTGGATAAGGTG...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACACCTTATCCACCACTaGGAGCTTCTCTTGGATGCC +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALHLIHH*ELLLDA
Trigger: GGCATCCAAGAGAAGCTCCAAGTGGTGGATAAGGTG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAAGTTGGGTGAGAATGTaGTGCACCACTCTGGATACA +
Preference number: 5 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLESWVRM*CTTLDT
Trigger: TGTATCCAGAGTGGTGCACAACATTCTCACCCAACT...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGATTTTGGATGTTAACTaGTCATTGGTCACTGAAGTG +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMILDVN*SLVTEV
Trigger: CACTTCAGTGACCAATGACAAGTTAACATCCAAAAT...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGATTTTGGATGTTAACTaGTCATTGGTCACTGAAGTG +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVILDVN*SLVTEV
Trigger: CACTTCAGTGACCAATGACAAGTTAACATCCAAAAT...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp AAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGGTGTCTTCCGCATTCATTTaGGATGTTAACTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: KLRSSKVSLQTGKVCNMVSSAFI*DVNLSL
Trigger: CAATGACAAGTTAACATCCAAAATGAATGCGGAAGA...CACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGTCTTCCGCATTCATTTaGGATGTTAACTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMSSAFI*DVNLSL
Trigger: CAATGACAAGTTAACATCCAAAATGAATGCGGAAGA...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACCTCTGAGTTCCAGGTaGAGTCGTCTTTCCTTTGAG +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALPLSSR*SRLSFE
Trigger: CTCAAAGGAAAGACGACTCAACCTGGAACTCAGAGG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGATCTCCTTTTTGAGCTaGAACAGATATCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMISFLS*NRYLSP
Trigger: AGGAGAAAGATATCTGTTCAAGCTCAAAAAGGAGAT...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TGGAAACTCAGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTGCAACATGCGACTTCAAATTCATTaGGTGTTAACCAAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: WKLRSSKVSLQTGKVCNMRLQIH*VLTKFH
Trigger: ATGGAACTTGGTTAACACCAAATGAATTTGAAGTCG...CATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCTGAGTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAACCGCAGCAGAGAAGTaGTCCCCCTTGACAGCACAC +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELTAAEK*SPLTAH
Trigger: GTGTGCTGTCAAGGGGGACAACTTCTCTGCTGCGGT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS GCA 90 bp GTACATTTCCGTAATCAGCCTTTCCTTAACCAGGTCCAACCACATTaGTTCCTGAAAGGGCTCACCGTAATCTCGAATATTAAATGGGAT +
Preference number: 5 (lower is better)
Translates to: VHFRNQPFLNQVQPH*FLKGLTVISNIKWD
Trigger: ATCCCATTTAATATTCGAGATTACGGTGAGCCCTTTCAGGAAGCAATGTGGTTGGACCTGGTTAAGGAAAGGCTGATTACGGAAATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258381.11
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAGATCACTCCTCAAGATaGGGAGAGTTACAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALDHSSR*GELQGD
Trigger: ATCTCCCTGTAACTCTCCCAATCTTGAGGAGTGATC...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAAGTTGGGTGAGAATGTaGTGCACCACTCTGGATACA +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALSWVRM*CTTLDT
Trigger: TGTATCCAGAGTGGTGCACAACATTCTCACCCAACT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAAGTTGGGTGAGAATGTaGTGCACCACTCTGGATACA +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKSWVRM*CTTLDT
Trigger: TGTATCCAGAGTGGTGCACAACATTCTCACCCAACT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAAAAAGTCCTCTCCAGTaGGGTGAGAATGTTGTGCAC +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKKSPLQ*GENVVH
Trigger: GTGCACAACATTCTCACCCAACTGGAGAGGACTTTT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACAGGATCTCATCGCTTaGCTGGGAGGATGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELQDLIA*LGGCSR
Trigger: CCTGGAACATCCTCCCAGCAAAGCGATGAGATCCTG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGATGTTAACTTGTCATaGGTCACTGAAGTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: FEDAMPKCGGDSELGNSEDVNLS*VTEVLL
Trigger: AAGAAGCACTTCAGTGACCAATGACAAGTTAACATC...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAGTTGTCACTGGCCACTaGCACAGTGCTAGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELVVTGH*HSASEE
Trigger: CTCCTCACTAGCACTGTGCAAGTGGCCAGTGACAAC...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAATTCTTTATCTCTTATTaGGGGGATCAGGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: FEDAMPKCGGDSELGNSEFFISY*GDQVVT
Trigger: AGTGACAACCTGATCCCCCAAATAAGAGATAAAGAA...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAAGAGTGGGGCATCTCTaGAGGGTCTTCTTTATCTCT +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALRVGHL*RVFFIS
Trigger: AGAGATAAAGAAGACCCTCAAGAGATGCCCCACTCT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGAGTGGGGCATCTCTaGAGGGTCTTCTTTATCTCT +
Preference number: 5 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQRVGHL*RVFFIS
Trigger: AGAGATAAAGAAGACCCTCAAGAGATGCCCCACTCT...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAGCTCTTCTGGGTCATTaGGTTCTGGAGAATTATCTC +
Preference number: 5 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEALLGH*VLENYL
Trigger: GAGATAATTCTCCAGAACCAAATGACCCAGAAGAGC...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAATCTTATGTCTCCTTTTaGGAGTTGACCAGATACATC +
Preference number: 5 (lower is better)
Translates to: FEDAMPKCGGDSELGNSESYVSF*ELTRYI
Trigger: GATGTATCTGGTCAACTCCAAAAAGGAGACATAAGA...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATCGCCTTTTGGGCCCTaGTCTCTACCGTGGAGTTAC +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELSPFGP*SLPWSY
Trigger: GTAACTCCACGGTAGAGACAAGGGCCCAAAAGGCGA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAGATCTCCTTTTTGAGCTaGAACAGATATCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LKMPCPNVEVTQSLETQKISFLS*NRYLSP
Trigger: AGGAGAAAGATATCTGTTCAAGCTCAAAAAGGAGAT...CTTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACCAGGTCCAACCACATaGCTTCCTGAAAGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELPGPTT*LPERAH
Trigger: GTGAGCCCTTTCAGGAAGCAATGTGGTTGGACCTGG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACTAAAAGTGGGGAACTaGCACATGCCTGTAATCCCA +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKLKVGN*HMPVIP
Trigger: TGGGATTACAGGCATGTGCAAGTTCCCCACTTTTAG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS TCA 90 bp GAAATATTGCCTCAGTGTAAGACAGCTCTGAATTTAGATTCCTGGTaGCTGTACTCTGAGACCAGCAATCTCCAAGTTTTACCTTGTGTG +
Preference number: 5 (lower is better)
Translates to: EILPQCKTALNLDSW*LYSETSNLQVLPCV
Trigger: CACACAAGGTAAAACTTGGAGATTGCTGGTCTCAGAGTACAGTCACCAGGAATCTAAATTCAGAGCTGTCTTACACTGAGGCAATATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490880.5
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATTAGTGATGATGGAGTaGTCTAGGAGGCCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKLVMME*SRRPSK
Trigger: CTTTGAAGGCCTCCTAGACAACTCCATCATCACTAA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAATTCACGCAGGTTAATTaGACTGAACAATGTCACCAG +
Preference number: 5 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEFTQVN*TEQCHQ
Trigger: CTGGTGACATTGTTCAGTCAAATTAACCTGCGTGAA...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAATTTGGGGGATCAGGTaGTCACTGGCCACTTGCACA +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELIWGIR*SLATCT
Trigger: TGTGCAAGTGGCCAGTGACAACCTGATCCCCCAAAT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAGCTCTTCTGGGTCATTaGGTTCTGGAGAATTATCTC +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALALLGH*VLENYL
Trigger: GAGATAATTCTCCAGAACCAAATGACCCAGAAGAGC...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTATGCAAATTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGGCTCTTCTGGGTCATTaGGTTCTGGAGAATTATCTC +
Preference number: 5 (lower is better)
Translates to: LCKLIVLKMPCPNVEVTQALLGH*VLENYL
Trigger: GAGATAATTCTCCAGAACCAAATGACCCAGAAGAGC...CTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAATTTGCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACTTTTCTTTCCTTTCTaGTCTGAAGGTGTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKLFFPF*SEGVLD
Trigger: GTCCAGCACACCTTCAGACAAGAAAGGAAAGAAAAG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATTCAGTTCTCGCCTTTaGGGCCCTTGTCTCTACCGT +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELFSSRL*GPCLYR
Trigger: ACGGTAGAGACAAGGGCCCAAAAGGCGAGAACTGAA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAAATCTCCTTTTTGAGCTaGAACAGATATCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: FEDAMPKCGGDSELGNSEISFLS*NRYLSP
Trigger: AGGAGAAAGATATCTGTTCAAGCTCAAAAAGGAGAT...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAACTCAGAACGACTTCAAATTCATTaGGTGTTAACCAAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: FEDAMPKCGGDSELGNSERLQIH*VLTKFH
Trigger: ATGGAACTTGGTTAACACCAAATGAATTTGAAGTCG...TTCTGAGTTTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAAGGAGGTCCTGGACTTaGTTCCAATGCTGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELRRSWT*FQCCRE
Trigger: CTCTCTGCAGCATTGGAACAAAGTCCAGGACCTCCT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATTCACGCAGGTTAATTaGACTGAACAATGTCACCAG +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKFTQVN*TEQCHQ
Trigger: CTGGTGACATTGTTCAGTCAAATTAACCTGCGTGAA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTACCTCTGAGTTCCAGGTaGAGTCGTCTTTCCTTTGAG +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELPLSSR*SRLSFE
Trigger: CTCAAAGGAAAGACGACTCAACCTGGAACTCAGAGG...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAACTAGCAACATGTGCTaGACTGGATTTCAGAATTGC +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALTSNMC*TGFQNC
Trigger: GCAATTCTGAAATCCAGTCAAGCACATGTTGCTAGT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAAAAGACACACTTCAGTaGACTGAAAGGCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKKDTLQ*TERQSK
Trigger: TTTGCTCTGCCTTTCAGTCAACTGAAGTGTGTCTTT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAGATCACTCCTCAAGATaGGGAGAGTTACAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELDHSSR*GELQGD
Trigger: ATCTCCCTGTAACTCTCCCAATCTTGAGGAGTGATC...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAAAAAGTCCTCTCCAGTaGGGTGAGAATGTTGTGCAC +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELKSPLQ*GENVVH
Trigger: GTGCACAACATTCTCACCCAACTGGAGAGGACTTTT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAGATGTTAACTTGTCATaGGTCACTGAAGTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKDVNLS*VTEVLL
Trigger: AAGAAGCACTTCAGTGACCAATGACAAGTTAACATC...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAAATTTTGGATGTTAACTaGTCATTGGTCACTGAAGTG +
Preference number: 5 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLEILDVN*SLVTEV
Trigger: CACTTCAGTGACCAATGACAAGTTAACATCCAAAAT...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAATTCTTTATCTCTTATTaGGGGGATCAGGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKFFISY*GDQVVT
Trigger: AGTGACAACCTGATCCCCCAAATAAGAGATAAAGAA...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATTCTTTATCTCTTATTaGGGGGATCAGGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALFFISY*GDQVVT
Trigger: AGTGACAACCTGATCCCCCAAATAAGAGATAAAGAA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAAGAGTGGGGCATCTCTaGAGGGTCTTCTTTATCTCT +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELRVGHL*RVFFIS
Trigger: AGAGATAAAGAAGACCCTCAAGAGATGCCCCACTCT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATCTTATGTCTCCTTTTaGGAGTTGACCAGATACATC +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALSYVSF*ELTRYI
Trigger: GATGTATCTGGTCAACTCCAAAAAGGAGACATAAGA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTAATTGTTTTGAAGATGCCATGCCCAAATGTGGAGGTGACTCAGAGCTTGGAACGACTTCAAATTCATTaGGTGTTAACCAAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: LIVLKMPCPNVEVTQSLERLQIH*VLTKFH
Trigger: ATGGAACTTGGTTAACACCAAATGAATTTGAAGTCG...TTCCAAGCTCTGAGTCACCTCCACATTTGGGCATGGCATCTTCAAAACAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258382.10
ENST00000392048.7
CDS GCA 90 bp GATTGGAATTCTAGGAAAAAGCTTGATCCATGGGTTGGATCAAGCTaGACTTTCGACAAGCTGTACTTTCAGTATAGTACCATGAATATA +
Preference number: 5 (lower is better)
Translates to: DWNSRKKLDPWVGSS*TFDKLYFQYSTMNI
Trigger: TATATTCATGGTACTATACTGAAAGTACAGCTTGTCGAAAGTGCAGCTTGATCCAACCCATGGATCAAGCTTTTTCCTAGAATTCCAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490880.5
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATTAGTGATGATGGAGTaGTCTAGGAGGCCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELLVMME*SRRPSK
Trigger: CTTTGAAGGCCTCCTAGACAACTCCATCATCACTAA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAATTTTGGATGTTAACTaGTCATTGGTCACTGAAGTG +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKILDVN*SLVTEV
Trigger: CACTTCAGTGACCAATGACAAGTTAACATCCAAAAT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTATCTTCCGCATTCATTTaGGATGTTAACTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALSSAFI*DVNLSL
Trigger: CAATGACAAGTTAACATCCAAAATGAATGCGGAAGA...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATTTAGTTCTTGCCTTTaGGACCCTCATCATGACCTC +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELFSSCL*DPHHDL
Trigger: GAGGTCATGATGAGGGTCCAAAAGGCAAGAACTAAA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAATCTCCTTTTTGAGCTaGAACAGATATCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALISFLS*NRYLSP
Trigger: AGGAGAAAGATATCTGTTCAAGCTCAAAAAGGAGAT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAAATCTCCTTTTTGAGCTaGAACAGATATCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKISFLS*NRYLSP
Trigger: AGGAGAAAGATATCTGTTCAAGCTCAAAAAGGAGAT...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp CTTCTAAAGATGGGAGCAGCAATGTTTCTTCCCAAGCAACATTCTCCTTTGAAACGACTTCAAATTCATTaGGTGTTAACCAAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: LLKMGAAMFLPKQHSPLKRLQIH*VLTKFH
Trigger: ATGGAACTTGGTTAACACCAAATGAATTTGAAGTCG...TTTCAAAGGAGAATGTTGCTTGGGAAGAAACATTGCTGCTCCCATCTTTAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTACGACTTCAAATTCATTaGGTGTTAACCAAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALRLQIH*VLTKFH
Trigger: ATGGAACTTGGTTAACACCAAATGAATTTGAAGTCG...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp AAAGACAGGAATAAGGGAGCTGAGAGGTATCAAAGTGATAAACGCATTGCCTTAAAACCGAGCACGTCTTaGAGATCTTTTTCAAATTCT +
Preference number: 5 (lower is better)
Translates to: KDRNKGAERYQSDKRIALKPSTS*RSFSNS
Trigger: AGAATTTGAAAAAGATCTCAAAGACGTGCTCGGTTT...TAAGGCAATGCGTTTATCACTTTGATACCTCTCAGCTCCCTTATTCCTGTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATTCACGCAGGTTAATTaGACTGAACAATGTCACCAG +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELFTQVN*TEQCHQ
Trigger: CTGGTGACATTGTTCAGTCAAATTAACCTGCGTGAA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAATGATGCCTGAATTCTaGATCCACAGAATAGTGAGC +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELMMPEF*IHRIVS
Trigger: GCTCACTATTCTGTGGATCAAGAATTCAGGCATCAT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAATCTGTCCCTGTGACTaGCTTTCACCAATAGATTGT +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELICPCD*LSPIDC
Trigger: ACAATCTATTGGTGAAAGCAAGTCACAGGGACAGAT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAAAGCAACATTCTCCTTaGAAATGTGACTTTGCCACC +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELKQHSP*KCDFAT
Trigger: GGTGGCAAAGTCACATTTCAAAGGAGAATGTTGCTT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAACTAGCAACATGTGCTaGACTGGATTTCAGAATTGC +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELTSNMC*TGFQNC
Trigger: GCAATTCTGAAATCCAGTCAAGCACATGTTGCTAGT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTAAAAGACACACTTCAGTaGACTGAAAGGCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELKDTLQ*TERQSK
Trigger: TTTGCTCTGCCTTTCAGTCAACTGAAGTGTGTCTTT...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS-3UTR CAA 90 bp TTGAACAAATCAACTCTAAAAAGACTTATGAGACAGTGGGGAGAATGTGAACTATCTTATGTCTCCTTTTaGGAGTTGACCAGATACATC +
Preference number: 5 (lower is better)
Translates to: LNKSTLKRLMRQWGECELSYVSF*ELTRYI
Trigger: GATGTATCTGGTCAACTCCAAAAAGGAGACATAAGA...TAGTTCACATTCTCCCCACTGTCTCATAAGTCTTTTTAGAGTTGATTTGTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258381.11
ENST00000358662.9
CDS TCA 90 bp CTCAGTAATGGTGATATTGCTGCCAGTAGTGGAAAAACTCATTCTTaGGTGCTGAGAAAAATCTTATATAGTGCAGATATACATACATAC +
Preference number: 5 (lower is better)
Translates to: LSNGDIAASSGKTHS*VLRKILYSADIHTY
Trigger: GTATGTATGTATATCTGCACTATATAAGATTTTTCTCAGCACTCAAGAATGAGTTTTTCCACTACTGGCAGCAATATCACCATTACTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000490880.5
CDS CAA 90 bp TGCTGCGTTTTGAGCTGTGCTGCTGCCTGCTGGCAAGCTTGTGCTTaGAGCTGGGCCACTCTGGGCGCATTTGCTGAGCCCACCAGGCCT +
Preference number: 6 (lower is better)
Translates to: CCVLSCAAACWQACA*SWATLGAFAEPTRP
Trigger: AGGCCTGGTGGGCTCAGCAAATGCGCCCAGAGTGGCCCAGCTCAAAGCACAAGCTTGCCAGCAGGCAGCAGCACAGCTCAAAACGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS GCA 72 bp GTAGTCCCTCTCCAGAGTGTGCAGCAAAATCCCTGCTaGCCCGCTCCACTGCTGCCACGCTGCCCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: VVPLQSVQQNPC*PAPLLPRCPSL
Trigger: AAGAGAAGGGCAGCGTGGCAGCAGTGGAGCGGGGCAGCAGGGATTTTGCTGCACACTCTGGAGAGGGACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480916.1
CDS CAA 72 bp TTGAGCTGTGCTGCTGCCTGCTGGCAAGCTTGTGCTTaGAGCTGGGCCACTCTGGGCGCATTTGCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: LSCAAACWQACA*SWATLGAFAEP
Trigger: GGGCTCAGCAAATGCGCCCAGAGTGGCCCAGCTCAAAGCACAAGCTTGCCAGCAGGCAGCAGCACAGCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS CAA 90 bp GACAGGGTCAGATGGGCTGGGCGACTCACTCAGGATCTCATCGCTTaGCTGGGAGGATGTTCCAGGCTCACTGACTCTTGGCGCACAGGG +
Preference number: 6 (lower is better)
Translates to: DRVRWAGRLTQDLIA*LGGCSRLTDSWRTG
Trigger: CCCTGTGCGCCAAGAGTCAGTGAGCCTGGAACATCCTCCCAGCAAAGCGATGAGATCCTGAGTGAGTCGCCCAGCCCATCTGACCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000455674.2
ENST00000462232.1
ENST00000486146.2
ENST00000540870.5
CDS CCA 72 bp GGGCTGGGCGACTCACTCAGGATCTCATCGCTTTGCTaGGAGGATGTTCCAGGCTCACTGACTCTTGGCGCA +
Preference number: 6 (lower is better)
Translates to: GLGDSLRISSLC*EDVPGSLTLGA
Trigger: TGCGCCAAGAGTCAGTGAGCCTGGAACATCCTCCCAGCAAAGCGATGAGATCCTGAGTGAGTCGCCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000455674.2
ENST00000462232.1
ENST00000486146.2
ENST00000540870.5
CDS CCA 72 bp AGGTTCTGCTGCGTTTTGAGCTGTGCTGCTGCCTGCTaGCAAGCTTGTGCTTTGAGCTGGGCCACTCTGGGC +
Preference number: 6 (lower is better)
Translates to: RFCCVLSCAAAC*QACALSWATLG
Trigger: GCCCAGAGTGGCCCAGCTCAAAGCACAAGCTTGCCAGCAGGCAGCAGCACAGCTCAAAACGCAGCAGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS GCA 72 bp GATGGGCTGGGCGACTCACTCAGGATCTCATCGCTTTaGTGGGAGGATGTTCCAGGCTCACTGACTCTTGGC +
Preference number: 6 (lower is better)
Translates to: DGLGDSLRISSL*WEDVPGSLTLG
Trigger: GCCAAGAGTCAGTGAGCCTGGAACATCCTCCCAGCAAAGCGATGAGATCCTGAGTGAGTCGCCCAGCCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000455674.2
ENST00000462232.1
ENST00000486146.2
ENST00000540870.5
CDS GCA 72 bp GCTTGCCAACAGGTTCTGCTGCGTTTTGAGCTGTGCTaGTGCCTGCTGGCAAGCTTGTGCTTTGAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: ACQQVLLRFELC*CLLASLCFELG
Trigger: GCCCAGCTCAAAGCACAAGCTTGCCAGCAGGCAGCAGCACAGCTCAAAACGCAGCAGAACCTGTTGGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS GCA 72 bp CGCCGCCACCAGGACTTTTCTTCTCTGGCTGTGGCTTaGCAACAGGTTCTGCTGCGTTTTGAGCTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: RRHQDFSSLAVA*QQVLLRFELCC
Trigger: GCAGCACAGCTCAAAACGCAGCAGAACCTGTTGGCAAGCCACAGCCAGAGAAGAAAAGTCCTGGTGGCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS CCA 72 bp TGGGTGGTGACCGCCGCCACCAGGACTTTTCTTCTCTaGCTGTGGCTTGCCAACAGGTTCTGCTGCGTTTTG +
Preference number: 6 (lower is better)
Translates to: WVVTAATRTFLL*LWLANRFCCVL
Trigger: CAAAACGCAGCAGAACCTGTTGGCAAGCCACAGCCAGAGAAGAAAAGTCCTGGTGGCGGCGGTCACCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS CCA 72 bp GTGACCGCCGCCACCAGGACTTTTCTTCTCTGGCTGTaGCTTGCCAACAGGTTCTGCTGCGTTTTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: VTAATRTFLLWL*LANRFCCVLSC
Trigger: ACAGCTCAAAACGCAGCAGAACCTGTTGGCAAGCCACAGCCAGAGAAGAAAAGTCCTGGTGGCGGCGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS CCA 72 bp CTGATGCCACCTCCCTGGGGGAAATTGCAAGACAAATaGCACAACAAGCAGAGAGTCTGGGTGGTGACCGCC +
Preference number: 6 (lower is better)
Translates to: LMPPPWGKLQDK*HNKQRVWVVTA
Trigger: GGCGGTCACCACCCAGACTCTCTGCTTGTTGTGCCATTTGTCTTGCAATTTCCCCCAGGGAGGTGGCATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS CAA 72 bp AGATGGGCTGGGCGACTCACTCAGGATCTCATCGCTTaGCTGGGAGGATGTTCCAGGCTCACTGACTCTTGG +
Preference number: 6 (lower is better)
Translates to: RWAGRLTQDLIA*LGGCSRLTDSW
Trigger: CCAAGAGTCAGTGAGCCTGGAACATCCTCCCAGCAAAGCGATGAGATCCTGAGTGAGTCGCCCAGCCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000455674.2
ENST00000462232.1
ENST00000486146.2
ENST00000540870.5
CDS TCA 72 bp TCTCATCGCTTTGCTGGGAGGATGTTCCAGGCTCACTaGCTCTTGGCGCACAGGGTGAACAGCTTGGTTGAG +
Preference number: 6 (lower is better)
Translates to: SHRFAGRMFQAH*LLAHRVNSLVE
Trigger: CTCAACCAAGCTGTTCACCCTGTGCGCCAAGAGTCAGTGAGCCTGGAACATCCTCCCAGCAAAGCGATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000455674.2
ENST00000462232.1
ENST00000540870.5
CDS TCA 72 bp CGTGGACAAGTACCGCAGCAGAGAAGTTGTCCCCCTTaGCAGCACACCTCGCATTCATCCGAGTTTTTCCGC +
Preference number: 6 (lower is better)
Translates to: RGQVPQQRSCPP*QHTSHSSEFFR
Trigger: GCGGAAAAACTCGGATGAATGCGAGGTGTGCTGTCAAGGGGGACAACTTCTCTGCTGCGGTACTTGTCCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258381.11
ENST00000358662.9
ENST00000477068.1
CDS CCA 72 bp TTCATCCGAGTTTTTCCGCTGCAAGGGCAGATAACGTaGGCACCGCTAGGACCATGGAGACCCACGAATGCT +
Preference number: 6 (lower is better)
Translates to: FIRVFPLQGQIT*APLGPWRPTNA
Trigger: AGCATTCGTGGGTCTCCATGGTCCTAGCGGTGCCCACGTTATCTGCCCTTGCAGCGGAAAAACTCGGATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS CAA 90 bp ACTTTTCTTCTCTGGCTGTGGCTTGCCAACAGGTTCTGCTGCGTTTaGAGCTGTGCTGCTGCCTGCTGGCAAGCTTGTGCTTTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: TFLLWLWLANRFCCV*SCAAACWQACALSW
Trigger: CCAGCTCAAAGCACAAGCTTGCCAGCAGGCAGCAGCACAGCTCAAAACGCAGCAGAACCTGTTGGCAAGCCACAGCCAGAGAAGAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS TCA 72 bp AAGACAAATGGCACAACAAGCAGAGAGTCTGGGTGGTaGCCGCCGCCACCAGGACTTTTCTTCTCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: KTNGTTSRESGW*PPPPGLFFSGC
Trigger: ACAGCCAGAGAAGAAAAGTCCTGGTGGCGGCGGTCACCACCCAGACTCTCTGCTTGTTGTGCCATTTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS GCA 72 bp ACTTTTCTTCTCTGGCTGTGGCTTGCCAACAGGTTCTaGTGCGTTTTGAGCTGTGCTGCTGCCTGCTGGCAA +
Preference number: 6 (lower is better)
Translates to: TFLLWLWLANRF*CVLSCAAACWQ
Trigger: TTGCCAGCAGGCAGCAGCACAGCTCAAAACGCAGCAGAACCTGTTGGCAAGCCACAGCCAGAGAAGAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS CAA 72 bp CTTTCCAGGGGCTGGGACAGGGATCACTCCTCAAGATaGGGAGAGTTACAGGGAGATGCTAGCAGGCAAAAC +
Preference number: 6 (lower is better)
Translates to: LSRGWDRDHSSR*GELQGDASRQN
Trigger: GTTTTGCCTGCTAGCATCTCCCTGTAACTCTCCCAATCTTGAGGAGTGATCCCTGTCCCAGCCCCTGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000462232.1
CDS CAA 72 bp TCGTGGACAAGTACCGCAGCAGAGAAGTTGTCCCCCTaGACAGCACACCTCGCATTCATCCGAGTTTTTCCG +
Preference number: 6 (lower is better)
Translates to: SWTSTAAEKLSP*TAHLAFIRVFP
Trigger: CGGAAAAACTCGGATGAATGCGAGGTGTGCTGTCAAGGGGGACAACTTCTCTGCTGCGGTACTTGTCCACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258381.11
ENST00000358662.9
ENST00000477068.1
CDS CAA 90 bp GGAGGGAGCTTCCTTCTGCTAGGCCAGTTGGGGCTTCAAGTAGGATaGGTGTGTCTCTGCTCTGCCATTCATAGGAAGCACCAACACGTT +
Preference number: 6 (lower is better)
Translates to: GGSFLLLGQLGLQVG*VCLCSAIHRKHQHV
Trigger: AACGTGTTGGTGCTTCCTATGAATGGCAGAGCAGAGACACACCAATCCTACTTGAAGCCCCAACTGGCCTAGCAGAAGGAAGCTCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000455674.2
ENST00000462232.1
ENST00000540870.5
CDS TCA 72 bp AGAACACAATTTTCACCGGCTGTTGACTTTAGAAGCTaGTCCCACAGGATGACCGCTGTCCTCCTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: RTQFSPAVDFRS*SHRMTAVLLGG
Trigger: GCCTCCCAGGAGGACAGCGGTCATCCTGTGGGATCAGCTTCTAAAGTCAACAGCCGGTGAAAATTGTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486146.2
CDS GCA 72 bp GAGGCTGAGACCCAGAGGAGGTGCAATGCCAGAGGGTaGAGAGGTGAGTTTGCTTCATTGTGGAAAAAGAAC +
Preference number: 6 (lower is better)
Translates to: EAETQRRCNARG*RGEFASLWKKN
Trigger: GTTCTTTTTCCACAATGAAGCAAACTCACCTCTGCACCCTCTGGCATTGCACCTCCTCTGGGTCTCAGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486146.2
CDS CAA 90 bp CAAGGGAGAGTGGGGCATCTCTTGAGGGTCTTCTTTATCTCTTATTaGGGGGATCAGGTTGTCACTGGCCACTTGCACAGTGCTAGTGAG +
Preference number: 6 (lower is better)
Translates to: QGRVGHLLRVFFISY*GDQVVTGHLHSASE
Trigger: CTCACTAGCACTGTGCAAGTGGCCAGTGACAACCTGATCCCCCAAATAAGAGATAAAGAAGACCCTCAAGAGATGCCCCACTCTCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000486146.2
ENST00000540870.5
CDS TCA 72 bp TGTGTATGGCATAGGCGATCCCCAGCTTCTGGTGCATaGAGTGCTGAAAAAGAGCCTCTTCCATGGCTCTTG +
Preference number: 6 (lower is better)
Translates to: CVWHRRSPASGA*SAEKEPLPWLL
Trigger: CAAGAGCCATGGAAGAGGCTCTTTTTCAGCACTTCATGCACCAGAAGCTGGGGATCGCCTATGCCATACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000540870.5
CDS CCA 72 bp AAATTGCAAGACAAATGGCACAACAAGCAGAGAGTCTaGGTGGTGACCGCCGCCACCAGGACTTTTCTTCTC +
Preference number: 6 (lower is better)
Translates to: KLQDKWHNKQRV*VVTAATRTFLL
Trigger: GAGAAGAAAAGTCCTGGTGGCGGCGGTCACCACCCAGACTCTCTGCTTGTTGTGCCATTTGTCTTGCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS CAA 72 bp TTCCTTCTGCTAGGCCAGTTGGGGCTTCAAGTAGGATaGGTGTGTCTCTGCTCTGCCATTCATAGGAAGCAC +
Preference number: 6 (lower is better)
Translates to: FLLLGQLGLQVG*VCLCSAIHRKH
Trigger: GTGCTTCCTATGAATGGCAGAGCAGAGACACACCAATCCTACTTGAAGCCCCAACTGGCCTAGCAGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000455674.2
ENST00000462232.1
ENST00000540870.5
CDS GCA 72 bp GTTGCGAAACATCAGGCGCATGTCTCGCACAAACCATaGCACCGTGTACATTTCCGTAATCAGCCTTTCCTT +
Preference number: 6 (lower is better)
Translates to: VAKHQAHVSHKP*HRVHFRNQPFL
Trigger: AAGGAAAGGCTGATTACGGAAATGTACACGGTGGCATGGTTTGTGCGAGACATGCGCCTGATGTTTCGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258381.11
ENST00000358662.9
ENST00000463022.1
ENST00000480916.1
CDS GCA 72 bp CGTAATCAGCCTTTCCTTAACCAGGTCCAACCACATTaGTTCCTGAAAGGGCTCACCGTAATCTCGAATCCG +
Preference number: 6 (lower is better)
Translates to: RNQPFLNQVQPH*FLKGLTVISNP
Trigger: CGGATTCGAGATTACGGTGAGCCCTTTCAGGAAGCAATGTGGTTGGACCTGGTTAAGGAAAGGCTGATTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480916.1
CDS CCA 72 bp CCTTGTGTGACCCTTCGTGGTGTACTAGGCGTCTTCTaGGACCTCTTTCCTTCATTCATTTCTGAAGTGCCA +
Preference number: 6 (lower is better)
Translates to: PCVTLRGVLGVF*DLFPSFISEVP
Trigger: TGGCACTTCAGAAATGAATGAAGGAAAGAGGTCCCAGAAGACGCCTAGTACACCACGAAGGGTCACACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000490880.5
ENST00000540870.5
CDS CCA 72 bp CAGCAATCTCCAAGTTTTACCTTGTGTGACCCTTCGTaGTGTACTAGGCGTCTTCTGGGACCTCTTTCCTTC +
Preference number: 6 (lower is better)
Translates to: QQSPSFTLCDPS*CTRRLLGPLSF
Trigger: GAAGGAAAGAGGTCCCAGAAGACGCCTAGTACACCACGAAGGGTCACACAAGGTAAAACTTGGAGATTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490880.5
CDS TCA 72 bp ATGACCTCTGAGTTCCAGGTTGAGTCGTCTTTCCTTTaGGTCACCTTATCCACCACTTGGAGCTTCTCTTGG +
Preference number: 6 (lower is better)
Translates to: MTSEFQVESSFL*VTLSTTWSFSW
Trigger: CCAAGAGAAGCTCCAAGTGGTGGATAAGGTGACTCAAAGGAAAGACGACTCAACCTGGAACTCAGAGGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000540870.5
CDS TCA 72 bp CTAGATAAAGCTGGGGAAATCCTAGAGCTTATTTCCTaGTTTTCGTTTGTGTCGGCCTGCACCACGAGGTGG +
Preference number: 6 (lower is better)
Translates to: LDKAGEILELIS*FSFVSACTTRW
Trigger: CCACCTCGTGGTGCAGGCCGACACAAACGAAAATCAGGAAATAAGCTCTAGGATTTCCCCAGCTTTATCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486146.2
CDS GCA 72 bp AGAAGCTCTAAGGTGAGCCTCCAGACAGGGAAAGTCTaGAACATGGTGACTGAGAGGGTAGTAGAAATTCAC +
Preference number: 6 (lower is better)
Translates to: RSSKVSLQTGKV*NMVTERVVEIH
Trigger: GTGAATTTCTACTACCCTCTCAGTCACCATGTTGCAGACTTTCCCTGTCTGGAGGCTCACCTTAGAGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS GCA 72 bp CGTAATCAGCCTTTCCTTAACCAGGTCCAACCACATTaGTTCCTGAAAGGGCTCACCGTAATCTCGAATCAG +
Preference number: 6 (lower is better)
Translates to: RNQPFLNQVQPH*FLKGLTVISNQ
Trigger: CTGATTCGAGATTACGGTGAGCCCTTTCAGGAAGCAATGTGGTTGGACCTGGTTAAGGAAAGGCTGATTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358662.9
CDS CCA 72 bp TTTCCTTTCTTGTCTGAAGGTGTGCTGGACACCTCCTaGGGCTCTTCTGGGTCATTTGGTTCTGGAGAATTA +
Preference number: 6 (lower is better)
Translates to: FPFLSEGVLDTS*GSSGSFGSGEL
Trigger: TAATTCTCCAGAACCAAATGACCCAGAAGAGCCCCAGGAGGTGTCCAGCACACCTTCAGACAAGAAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000486146.2
ENST00000490880.5
ENST00000540870.5
CDS CCA 72 bp AGAAATGATGATAACTGGCATTTGGGTGCAGGAGTATaGGAACTGTTGTTCCTGGTGCCTTGCCTAACTGCC +
Preference number: 6 (lower is better)
Translates to: RNDDNWHLGAGV*ELLFLVPCLTA
Trigger: GGCAGTTAGGCAAGGCACCAGGAACAACAGTTCCCATACTCCTGCACCCAAATGCCAGTTATCATCATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477068.1
CDS CAA 90 bp ATCTCTTATCTCTGGCATAGAGCCCAAGGGAGAGTGGGGCATCTCTaGAGGGTCTTCTTTATCTCTTATTTGGGGGATCAGGTTGTCACT +
Preference number: 6 (lower is better)
Translates to: ISYLWHRAQGRVGHL*RVFFISYLGDQVVT
Trigger: AGTGACAACCTGATCCCCCAAATAAGAGATAAAGAAGACCCTCAAGAGATGCCCCACTCTCCCTTGGGCTCTATGCCAGAGATAAGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000486146.2
ENST00000540870.5
CDS CAA 90 bp GTGAGGAGGCTGGGCATCTCTTCTGAGTCTTCTTCCGCATTCATTTaGGATGTTAACTTGTCATTGGTCACTGAAGTGCTTCTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: VRRLGISSESSSAFI*DVNLSLVTEVLLPS
Trigger: GGAAGGAAGAAGCACTTCAGTGACCAATGACAAGTTAACATCCAAAATGAATGCGGAAGAAGACTCAGAAGAGATGCCCAGCCTCCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000486146.2
ENST00000540870.5
CDS TCA 72 bp GACCCAGAGGAGGTGCAATGCCAGAGGGTGCAGAGGTaGGTTTGCTTCATTGTGGAAAAAGAACACAATTTT +
Preference number: 6 (lower is better)
Translates to: DPEEVQCQRVQR*VCFIVEKEHNF
Trigger: AAAATTGTGTTCTTTTTCCACAATGAAGCAAACTCACCTCTGCACCCTCTGGCATTGCACCTCCTCTGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486146.2
CDS GCA 72 bp CGTAATCAGCCTTTCCTTAACCAGGTCCAACCACATTaGTTCCTGAAAGGGCTCACCGTAATCTCGAATCTT +
Preference number: 6 (lower is better)
Translates to: RNQPFLNQVQPH*FLKGLTVISNL
Trigger: AAGATTCGAGATTACGGTGAGCCCTTTCAGGAAGCAATGTGGTTGGACCTGGTTAAGGAAAGGCTGATTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463022.1
CDS GCA 72 bp CGTAATCAGCCTTTCCTTAACCAGGTCCAACCACATTaGTTCCTGAAAGGGCTCACCGTAATCTCGAATATT +
Preference number: 6 (lower is better)
Translates to: RNQPFLNQVQPH*FLKGLTVISNI
Trigger: AATATTCGAGATTACGGTGAGCCCTTTCAGGAAGCAATGTGGTTGGACCTGGTTAAGGAAAGGCTGATTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258381.11
CDS TCA 72 bp CGCCGTCATTGGCTTCATGAAAACCGAGCACGTCTTTaGGATCTTTTTCAAATTCTGCCTCTAAGTCAAGTC +
Preference number: 6 (lower is better)
Translates to: RRHWLHENRARL*DLFQILPLSQV
Trigger: GACTTGACTTAGAGGCAGAATTTGAAAAAGATCTCAAAGACGTGCTCGGTTTTCATGAAGCCAATGACGGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258381.11
ENST00000358662.9
ENST00000463022.1
ENST00000477068.1
ENST00000480916.1
ENST00000483067.1
CDS TCA 72 bp CAAGGAAGAGTCCAGAAACCGCCGTCATTGGCTTCATaGAAACCGAGCACGTCTTTGAGATCTTTTTCAAAT +
Preference number: 6 (lower is better)
Translates to: QGRVQKPPSLAS*KPSTSLRSFSN
Trigger: ATTTGAAAAAGATCTCAAAGACGTGCTCGGTTTTCATGAAGCCAATGACGGCGGTTTCTGGACTCTTCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000258381.11
ENST00000358662.9
ENST00000477068.1
ENST00000480916.1
ENST00000483067.1
CDS GCA 72 bp AGGTTAAAAGTCCTCTCCAGTTGGGTGAGAATGTTGTaGACCACTCTGGATACAGGGATCAAATTTCTACAG +
Preference number: 6 (lower is better)
Translates to: RLKVLSSWVRML*TTLDTGIKFLQ
Trigger: CTGTAGAAATTTGATCCCTGTATCCAGAGTGGTGCACAACATTCTCACCCAACTGGAGAGGACTTTTAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000455674.2
ENST00000462232.1
ENST00000540870.5
CDS TCA 72 bp CCTCAGTGTAAGACAGCTCTGAATTTAGATTCCTGGTaGCTGTACTCTGAGACCAGCAATCTCCAAGTTTTA +
Preference number: 6 (lower is better)
Translates to: PQCKTALNLDSW*LYSETSNLQVL
Trigger: TAAAACTTGGAGATTGCTGGTCTCAGAGTACAGTCACCAGGAATCTAAATTCAGAGCTGTCTTACACTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490880.5
CDS GCA 72 bp TCTAGGAAAAAGCTTGATCCATGGGTTGGATCAAGCTaGACTTTCGACAAGCTGTACTTTCAGTATAGTACC +
Preference number: 6 (lower is better)
Translates to: SRKKLDPWVGSS*TFDKLYFQYST
Trigger: GGTACTATACTGAAAGTACAGCTTGTCGAAAGTGCAGCTTGATCCAACCCATGGATCAAGCTTTTTCCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490880.5
CDS CAA 72 bp TCTGAGTCTTCTTCCGCATTCATTTTGGATGTTAACTaGTCATTGGTCACTGAAGTGCTTCTTCCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: SESSSAFILDVN*SLVTEVLLPSW
Trigger: CCAGGAAGGAAGAAGCACTTCAGTGACCAATGACAAGTTAACATCCAAAATGAATGCGGAAGAAGACTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000486146.2
ENST00000540870.5
CDS CAA 90 bp GCTTCTGTAAATCGTCACCAGATTGGGATATTCACGCAGGTTAATTaGACTGAACAATGTCACCAGAAGAGACAGGTTAAAAGTCCTCTC +
Preference number: 6 (lower is better)
Translates to: ASVNRHQIGIFTQVN*TEQCHQKRQVKSPL
Trigger: GAGAGGACTTTTAACCTGTCTCTTCTGGTGACATTGTTCAGTCAAATTAACCTGCGTGAATATCCCAATCTGGTGACGATTTACAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000455674.2
ENST00000462232.1
ENST00000540870.5
CDS CAA 90 bp GGGAAAGTCTGCAACATGGTGACTGAGAGGGTAGTAGAAATTCACTaGCTATTTAACTCTCTCTTGAGATTTATTCTTGGAGGACAGAGC +
Preference number: 6 (lower is better)
Translates to: GKVCNMVTERVVEIH*LFNSLLRFILGGQS
Trigger: GCTCTGTCCTCCAAGAATAAATCTCAAGAGAGAGTTAAATAGCAAGTGAATTTCTACTACCCTCTCAGTCACCATGTTGCAGACTTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS CAA 90 bp CTCCTAGGGTCATTCCTTCACAACGTATATTCCGTTTCCAGTTCTTaGCGTTCCTTCCTTTTCCTTCGACTTCAAATTCATTTGGTGTTA +
Preference number: 6 (lower is better)
Translates to: LLGSFLHNVYSVSSS*RSFLFLRLQIHLVL
Trigger: TAACACCAAATGAATTTGAAGTCGAAGGAAAAGGAAGGAACGCAAAGAACTGGAAACGGAATATACGTTGTGAAGGAATGACCCTAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000489597.1
ENST00000540870.5
CDS CAA 72 bp AATCGTCACCAGATTGGGATATTCACGCAGGTTAATTaGACTGAACAATGTCACCAGAAGAGACAGGTTAAA +
Preference number: 6 (lower is better)
Translates to: NRHQIGIFTQVN*TEQCHQKRQVK
Trigger: TTTAACCTGTCTCTTCTGGTGACATTGTTCAGTCAAATTAACCTGCGTGAATATCCCAATCTGGTGACGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000409815.6
ENST00000455674.2
ENST00000462232.1
ENST00000540870.5
CDS GCA 72 bp CATTCCTTCACAACGTATATTCCGTTTCCAGTTCTTTaGGTTCCTTCCTTTTCCTTCGACTTCAAATTCATT +
Preference number: 6 (lower is better)
Translates to: HSFTTYIPFPVL*VPSFSFDFKFI
Trigger: AATGAATTTGAAGTCGAAGGAAAAGGAAGGAACGCAAAGAACTGGAAACGGAATATACGTTGTGAAGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258381.11
ENST00000258382.10
ENST00000358662.9
ENST00000392048.7
ENST00000489597.1
ENST00000540870.5
CDS CAA 72 bp AGGGTAGTAGAAATTCACTTGCTATTTAACTCTCTCTaGAGATTTATTCTTGGAGGACAGAGCAAAAGTCCA +
Preference number: 6 (lower is better)
Translates to: RVVEIHLLFNSL*RFILGGQSKSP
Trigger: TGGACTTTTGCTCTGTCCTCCAAGAATAAATCTCAAGAGAGAGTTAAATAGCAAGTGAATTTCTACTACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS CAA 72 bp TGCAACATGGTGACTGAGAGGGTAGTAGAAATTCACTaGCTATTTAACTCTCTCTTGAGATTTATTCTTGGA +
Preference number: 6 (lower is better)
Translates to: CNMVTERVVEIH*LFNSLLRFILG
Trigger: TCCAAGAATAAATCTCAAGAGAGAGTTAAATAGCAAGTGAATTTCTACTACCCTCTCAGTCACCATGTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258382.10
ENST00000392048.7
ENST00000540870.5
CDS TCA 72 bp TTCTATGAACATTTAACTCCTTATAAATCATGCTGTTaGATCCTAACGGGAGCTCTTCACATTTCTGCTCTT +
Preference number: 6 (lower is better)
Translates to: FYEHLTPYKSCC*ILTGALHISAL
Trigger: AAGAGCAGAAATGTGAAGAGCTCCCGTTAGGATTCAACAGCATGATTTATAAGGAGTTAAATGTTCATAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489597.1
CDS TCA 72 bp TTGCTGCCAGTAGTGGAAAAACTCATTCTTGAGTGCTaGGAAAAATCTTATATAGTGCAGATATACATACAT +
Preference number: 6 (lower is better)
Translates to: LLPVVEKLILEC*EKSYIVQIYIH
Trigger: ATGTATGTATATCTGCACTATATAAGATTTTTCTCAGCACTCAAGAATGAGTTTTTCCACTACTGGCAGCAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000490880.5