RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000185591

Ensembl transcript IDs: ENST00000327443.9, ENST00000426431.2, ENST00000548560.1, ENST00000551969.5

Found 664 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCAAAGCTGGTCTGCTCATCCTCTTAGAAGAGGTCTGGTATCTGTaGAGTAGAGCCAAGAGAGGCACCACAGAGAGCACAGTCTCCCAA +
Preference number: 1 (lower is better)
Translates to: LKAGLLILLEEVWYL*SRAKRGTTESTVSQ
Trigger: TTGGGAGACTGTGCTCTCTGTGGTGCCTCTCTTGGCTCTACTCCACAGATACCAGACCTCTTCTAAGAGGATGAGCAGACCAGCTTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CCA 90 bp CAGGTCAACCTCAAAGCTGGTCTGCTCATCCTCTTAGAAGAGGTCTaGTATCTGTGGAGTAGAGCCAAGAGAGGCACCACAGAGAGCACA +
Preference number: 1 (lower is better)
Translates to: QVNLKAGLLILLEEV*YLWSRAKRGTTEST
Trigger: TGTGCTCTCTGTGGTGCCTCTCTTGGCTCTACTCCACAGATACCAGACCTCTTCTAAGAGGATGAGCAGACCAGCTTTGAGGTTGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR GCA 90 bp TGGAAGAGACTGAGTGGCTCACTACTGCTGGGAGACAAAAGAAGCTaGTTCTGTTTTGAGGCCAAACAAGATACTGGATCTGGAGCTTCC +
Preference number: 1 (lower is better)
Translates to: WKRLSGSLLLGDKRS*FCFEAKQDTGSGAS
Trigger: GGAAGCTCCAGATCCAGTATCTTGTTTGGCCTCAAAACAGAAGCAGCTTCTTTTGTCTCCCAGCAGTAGTGAGCCACTCAGTCTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR GCA 90 bp GGGGTTGGAGAAGTGCCATATCTTCCTCCCTTTCCCCAAAGCTACTaGTGCGACCTTTCTTTCATCCTTGTACATAAGTTACTGGCTCTC +
Preference number: 1 (lower is better)
Translates to: GVGEVPYLPPFPQSY*CDLSFILVHKLLAL
Trigger: GAGAGCCAGTAACTTATGTACAAGGATGAAAGAAAGGTCGCAGCAGTAGCTTTGGGGAAAGGGAGGAAGATATGGCACTTCTCCAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CCA 90 bp ATCCCTCTCCTGATTCTTCTCAACACCATGCATTTTAATGCTTCATaGCTCTCTCTTCCATGTCTCTTGGACCCATGCTACCTTGCATCC +
Preference number: 1 (lower is better)
Translates to: IPLLILLNTMHFNAS*LSLPCLLDPCYLAS
Trigger: GGATGCAAGGTAGCATGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTTGAGAAGAATCAGGAGAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CCA 90 bp ATCCATCATGGAAGAGCTGAGAAGAGAAATGCAGGAAGGGTAGGCTaGGGTAAGAAGTGTAAGAAGAAACTGGGGTCAAACAAATGCTCA +
Preference number: 1 (lower is better)
Translates to: IHHGRAEKRNAGRVG*GKKCKKKLGSNKCS
Trigger: TGAGCATTTGTTTGACCCCAGTTTCTTCTTACACTTCTTACCCCAGCCTACCCTTCCTGCATTTCTCTTCTCAGCTCTTCCATGATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR TCA 90 bp ACGCTTAAGCTGGTGGGAAGCCAAGACAACATCTACAGAAAAGCTTaGTGTGTCACAACAAGGCTCAGCCATAGGGAAATAAGGCAATAT +
Preference number: 1 (lower is better)
Translates to: TLKLVGSQDNIYRKA*CVTTRLSHREIRQY
Trigger: ATATTGCCTTATTTCCCTATGGCTGAGCCTTGTTGTGACACATCAAGCTTTTCTGTAGATGTTGTCTTGGCTTCCCACCAGCTTAAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR TCA 90 bp AGATACCAGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTaGGGACAATTCTGGTTGCATTTAAATCTCAGTGCCAAATGCACT +
Preference number: 1 (lower is better)
Translates to: RYQKVERDNAFMAGP*GQFWLHLNLSAKCT
Trigger: AGTGCATTTGGCACTGAGATTTAAATGCAACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCTGGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR GCA 90 bp GTTAAGGGAAAACATCATAAGAACCACTGTCTTGCCACTAGCACATaGTTTGGAGGAGTTCTGCAGAATGGAAACCTGAAACAGATTCAC +
Preference number: 1 (lower is better)
Translates to: VKGKHHKNHCLATST*FGGVLQNGNLKQIH
Trigger: GTGAATCTGTTTCAGGTTTCCATTCTGCAGAACTCCTCCAAAGCATGTGCTAGTGGCAAGACAGTGGTTCTTATGATGTTTTCCCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CCA 90 bp TCTAACAAGATACCAGAAGGTCGAGAGAGACAATGCTTTTATGGCTaGGCCTTGAGGACAATTCTGGTTGCATTTAAATCTCAGTGCCAA +
Preference number: 1 (lower is better)
Translates to: SNKIPEGRERQCFYG*ALRTILVAFKSQCQ
Trigger: TTGGCACTGAGATTTAAATGCAACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCTGGTATCTTGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR TCA 90 bp TCCTTGTACATAAGTTACTGGCTCTCTTCTAAGGGAGATAAATTCTaGGATTTCACATTTTCCCTCTCAACCCCAATAGGCTACCCAGCT +
Preference number: 1 (lower is better)
Translates to: SLYISYWLSSKGDKF*DFTFSLSTPIGYPA
Trigger: AGCTGGGTAGCCTATTGGGGTTGAGAGGGAAAATGTGAAATCTCAGAATTTATCTCCCTTAGAAGAGAGCCAGTAACTTATGTACAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR GCA 90 bp AGTGAAAAGCTCTCTAACAAGATACCAGAAGGTCGAGAGAGACAATaGTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTGCATTTAAA +
Preference number: 1 (lower is better)
Translates to: SEKLSNKIPEGRERQ*FYGWALRTILVAFK
Trigger: TTTAAATGCAACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCTGGTATCTTGTTAGAGAGCTTTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR TCA 90 bp AAATTGACAGAAGTGCCTCATCCAGGCAGTAACAAAAACAAAACATaGAGTGATCAGATGAGAGAAGATGAGACGGCAACAGTTGAGTTA +
Preference number: 1 (lower is better)
Translates to: KLTEVPHPGSNKNKT*SDQMREDETATVEL
Trigger: TAACTCAACTGTTGCCGTCTCATCTTCTCTCATCTGATCACTTCATGTTTTGTTTTTGTTACTGCCTGGATGAGGCACTTCTGTCAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CAA 90 bp ATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATGCTACCTaGCATCCCGGGGTTAAGGGGTATGGCCCATATGTCTCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: MLHGSLFHVSWTHAT*HPGVKGYGPYVSGP
Trigger: GGGGCCAGAGACATATGGGCCATACCCCTTAACCCCGGGATGCAAGGTAGCATGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CAA 90 bp CCTTTGACTCTCCAGCGCCAAGAAGGTGCCTGCGTCAGTAGTATTTaGAACACTCCCTCCACAGTTACTTCAAGCATCAGCCTGGGCTTC +
Preference number: 2 (lower is better)
Translates to: PLTLQRQEGACVSSI*NTPSTVTSSISLGF
Trigger: GAAGCCCAGGCTGATGCTTGAAGTAACTGTGGAGGGAGTGTTCAAAATACTACTGACGCAGGCACCTTCTTGGCGCTGGAGAGTCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGGACCCATGCTACCTTaGATCCCGGGGTTAAGGGGT +
Preference number: 2 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDGPMLP*IPGLRG
Trigger: ACCCCTTAACCCCGGGATGCAAGGTAGCATGGGTCC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGAAGGGAGATGCCTTTaGCTCTCCAGCGCCAAGAAG +
Preference number: 2 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMEGRCL*LSSAKK
Trigger: CTTCTTGGCGCTGGAGAGTCAAAGGCATCTCCCTTC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR GCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCTGTCTCTTGGACCCATaGTACCTTGCATCCCGGGGT +
Preference number: 2 (lower is better)
Translates to: FSLMFPTFKEALMIQMGACLLDP*YLASRG
Trigger: ACCCCGGGATGCAAGGTAGCATGGGTCCAAGAGACA...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTCTTGTATCCCTCTCCTaGTTCTTCTCAACACCATGC +
Preference number: 2 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGLVSLS*FFSTPC
Trigger: GCATGGTGTTGAGAAGAATCAGGAGAGGGATACAAG...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGAAGGGAGATGCCTTTaGCTCTCCAGCGCCAAGAAG +
Preference number: 2 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSEGRCL*LSSAKK
Trigger: CTTCTTGGCGCTGGAGAGTCAAAGGCATCTCCCTTC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGATGATACAGATGGGTaGCGGGACCCCATCTCCTCT +
Preference number: 2 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSDDTDG*RDPISS
Trigger: AGAGGAGATGGGGTCCCGGCACCCATCTGTATCATC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGAACGCTTAAGCTGGTaGGAAGCCAAGACAACATCT +
Preference number: 2 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGERLSW*EAKTTS
Trigger: AGATGTTGTCTTGGCTTCCCACCAGCTTAAGCGTTC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTCATGAAGTGATCAGATaGGAGAAGATGAGACGGCAA +
Preference number: 2 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGHEVIR*EKMRRQ
Trigger: TTGCCGTCTCATCTTCTCTCATCTGATCACTTCATG...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGGGCTATCATTCCCATaGTCATGTGCTTCCCTTTCC +
Preference number: 2 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMGLSFP*SCASLS
Trigger: GGAAAGGGAAGCACATGATCATGGGAATGATAGCCC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR GCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTGGACCCATGCTACCTTaGATCCCGGGGTTAAGGGGT +
Preference number: 2 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFGPMLP*IPGLRG
Trigger: ACCCCTTAACCCCGGGATGCAAGGTAGCATGGGTCC...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATCTTGCCACTAGCACATaGTTTGGAGGAGTTCTGCAG +
Preference number: 2 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDLATST*FGGVLQ
Trigger: CTGCAGAACTCCTCCAAAGCATGTGCTAGTGGCAAG...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGCAGGAAGGGTAGGCTaGGGTAAGAAGTGTAAGAAG +
Preference number: 2 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDAGRVG*GKKCKK
Trigger: CTTCTTACACTTCTTACCCCAGCCTACCCTTCCTGC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGCCCAGCCAACCCCTGTaGATGCATCTCTATATATCT +
Preference number: 2 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMPSQPL*MHLYIS
Trigger: AGATATATAGAGATGCATTCACAGGGGTTGGCTGGG...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTAGGAGTGCAAGAAGCTaGTCCCAAACAAAAAGACAA +
Preference number: 2 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGRSARS*SQTKRQ
Trigger: TTGTCTTTTTGTTTGGGATCAGCTTCTTGCACTCCT...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGGGCTATCATTCCCATaGTCATGTGCTTCCCTTTCC +
Preference number: 2 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSGLSFP*SCASLS
Trigger: GGAAAGGGAAGCACATGATCATGGGAATGATAGCCC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACTGGGGTCAAACAAATaGTCATCAAAGCGTGGCACC +
Preference number: 2 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQLGSNK*SSKRGT
Trigger: GGTGCCACGCTTTGATGAGCATTTGTTTGACCCCAG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR GCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGAATCTCAGTGCCAAATaGACTAGGTTCCCTGCCGTT +
Preference number: 2 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMNLSAK*TRFPAV
Trigger: AACGGCAGGGAACCTAGTGCATTTGGCACTGAGATT...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATCTCTTCCATGTCTCTTaGACCCATGCTACCTTGCAT +
Preference number: 2 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDLFHVS*THATLH
Trigger: ATGCAAGGTAGCATGGGTCCAAGAGACATGGAAGAG...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGCAGGAAGGGTAGGCTaGGGTAAGAAGTGTAAGAAG +
Preference number: 2 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSAGRVG*GKKCKK
Trigger: CTTCTTACACTTCTTACCCCAGCCTACCCTTCCTGC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CAA 90 bp AAGATACCAGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTaGAGGACAATTCTGGTTGCATTTAAATCTCAGTGCCAAATGCAC +
Preference number: 2 (lower is better)
Translates to: KIPEGRERQCFYGWA*RTILVAFKSQCQMH
Trigger: GTGCATTTGGCACTGAGATTTAAATGCAACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCTGGTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGTTTATGGCTGGGCCTTaGGGACAATTCTGGTTGCAT +
Preference number: 2 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSFMAGP*GQFWLH
Trigger: ATGCAACCAGAATTGTCCTCAAGGCCCAGCCATAAA...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTATGACCAAGGTATTTTaGTCACAGAATGGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGMTKVF*SQNGLP
Trigger: AGGAAGACCATTCTGTGACCAAAATACCTTGGTCAT...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTATGAACGCTTAAGCTaGTGGGAAGCCAAGACAACA +
Preference number: 2 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMYERLS*WEAKTT
Trigger: TGTTGTCTTGGCTTCCCACCAGCTTAAGCGTTCATA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGAGACAATGCTTTTATaGCTGGGCCTTGAGGACAAT +
Preference number: 2 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMETMLL*LGLEDN
Trigger: ATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGCGTCAGTAGTATTTTaGACACTCCCTCCACAGTTA +
Preference number: 2 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQASVVF*TLPPQL
Trigger: TAACTGTGGAGGGAGTGTTCAAAATACTACTGACGC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTTGTCTCTTGGACCCATaGTACCTTGCATCCCGGGGT +
Preference number: 2 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTCLLDP*YLASRG
Trigger: ACCCCGGGATGCAAGGTAGCATGGGTCCAAGAGACA...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGCCAACCCCTGTGAATaGATCTCTATATATCTTTAT +
Preference number: 2 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGANPCE*ISIYLY
Trigger: ATAAAGATATATAGAGATGCATTCACAGGGGTTGGC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCAATGCTTTTATGGCTaGGCCTTGAGGACAATTCTG +
Preference number: 2 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSQCFYG*ALRTIL
Trigger: CAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAATCTACAGAAAAGCTTaGTGTGTCACAACAAGGCTC +
Preference number: 2 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQIYRKA*CVTTRL
Trigger: GAGCCTTGTTGTGACACATCAAGCTTTTCTGTAGAT...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGAAGACTTCTAATTCTTaGTGCTCAGAGCAGCTAATG +
Preference number: 2 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMKTSNS*CSEQLM
Trigger: CATTAGCTGCTCTGAGCATCAAGAATTAGAAGTCTT...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAAACAGATTCACTGGCTaGTGCTCCTTATTGACAATG +
Preference number: 2 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQNRFTG*CSLLTM
Trigger: CATTGTCAATAAGGAGCATCAGCCAGTGAATCTGTT...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGAACTTAGAGCTACCTTaGAAGACAGCAGTACCAAAG +
Preference number: 2 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSNLELP*KTAVPK
Trigger: CTTTGGTACTGCTGTCTTCCAAGGTAGCTCTAAGTT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACTGAAACAGATTCACTaGCTGATGCTCCTTATTGAC +
Preference number: 2 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQLKQIH*LMLLID
Trigger: GTCAATAAGGAGCATCAGCCAGTGAATCTGTTTCAG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGAGCGTTAATAGAATTTaGTCTGGGGAAAGTTCCTTG +
Preference number: 2 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSSVNRI*SGESSL
Trigger: CAAGGAACTTTCCCCAGATCAAATTCTATTAACGCT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGCCAACCCCTGTGAATaGATCTCTATATATCTTTAT +
Preference number: 2 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDANPCE*ISIYLY
Trigger: ATAAAGATATATAGAGATGCATTCACAGGGGTTGGC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCTTGTATCCCTCTCCTaGTTCTTCTCAACACCATGC +
Preference number: 2 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTLVSLS*FFSTPC
Trigger: GCATGGTGTTGAGAAGAATCAGGAGAGGGATACAAG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCGCCAAGAAGGTGCCTaGGTCAGTAGTATTTTGAAC +
Preference number: 2 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTRQEGA*VSSILN
Trigger: GTTCAAAATACTACTGACGCAGGCACCTTCTTGGCG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR GCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGACATACAAAAACACTTaGTTTCTATCAGATCAGGGT +
Preference number: 2 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMTYKNT*FLSDQG
Trigger: ACCCTGATCTGATAGAAAGCAAGTGTTTTTGTATGT...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCTCTTCCATGTCTCTTaGACCCATGCTACCTTGCAT +
Preference number: 2 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTLFHVS*THATLH
Trigger: ATGCAAGGTAGCATGGGTCCAAGAGACATGGAAGAG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTATTTTGGTCACAGAATaGTCTTCCTCCTCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTILVTE*SSSSQP
Trigger: TGGCTGGGAGGAGGAAGACCATTCTGTGACCAAAAT...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGATTTCTTTTTGTTCTaGGCTATCATTCCCATGATC +
Preference number: 2 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSDFFLF*AIIPMI
Trigger: GATCATGGGAATGATAGCCCAGAACAAAAAGAAATC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR GCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTTTCTTCTCAACACCATaGATTTTAATGCTTCATGGC +
Preference number: 2 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFFFSTP*ILMLHG
Trigger: GCCATGAAGCATTAAAATGCATGGTGTTGAGAAGAA...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CAA 90 bp CAGTTTATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTaGTACAATTCCACTGAAAGACTTCTAATTCTTGATGCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: QFIQTEPRLLSSKGL*YNSTERLLILDAQS
Trigger: GCTCTGAGCATCAAGAATTAGAAGTCTTTCAGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTATAAACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR GCA 72 bp TCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTaGCGGGACCCCATCTCCTCTCTTGTATCCCTCTCC +
Preference number: 3 (lower is better)
Translates to: SHLQRGTDDTDG*RDPISSLVSLS
Trigger: GGAGAGGGATACAAGAGAGGAGATGGGGTCCCGGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR GCA 72 bp GCTCTCTCTTCCATGTCTCTTGGACCCATGCTACCTTaGATCCCGGGGTTAAGGGGTATGGCCCATATGTCT +
Preference number: 3 (lower is better)
Translates to: ALSSMSLGPMLP*IPGLRGMAHMS
Trigger: AGACATATGGGCCATACCCCTTAACCCCGGGATGCAAGGTAGCATGGGTCCAAGAGACATGGAAGAGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTGGACCCATGCTACCTaGCATCCCGGGGTTAAGGGG +
Preference number: 3 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGWTHAT*HPGVKG
Trigger: CCCCTTAACCCCGGGATGCAAGGTAGCATGGGTCCA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR TCA 72 bp TTGATGCTCAGAGCAGCTAATGAAGGGAGATGCCTTTaGCTCTCCAGCGCCAAGAAGGTGCCTGCGTCAGTA +
Preference number: 3 (lower is better)
Translates to: LMLRAANEGRCL*LSSAKKVPASV
Trigger: TACTGACGCAGGCACCTTCTTGGCGCTGGAGAGTCAAAGGCATCTCCCTTCATTAGCTGCTCTGAGCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR TCA 72 bp CTGTGTAGCACCCACAGAGTGCCAGTTGGAAATCCCTaGAGGAAGACGGTGTGGGTTGTTACTGTTCTGGGT +
Preference number: 3 (lower is better)
Translates to: LCSTHRVPVGNP*RKTVWVVTVLG
Trigger: ACCCAGAACAGTAACAACCCACACCGTCTTCCTTCAGGGATTTCCAACTGGCACTCTGTGGGTGCTACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CCA 72 bp GGTCTGCTCATCCTCTTAGAAGAGGTCTGGTATCTGTaGAGTAGAGCCAAGAGAGGCACCACAGAGAGCACA +
Preference number: 3 (lower is better)
Translates to: GLLILLEEVWYL*SRAKRGTTEST
Trigger: TGTGCTCTCTGTGGTGCCTCTCTTGGCTCTACTCCACAGATACCAGACCTCTTCTAAGAGGATGAGCAGACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR TCA 72 bp TCCAGCGCCAAGAAGGTGCCTGCGTCAGTAGTATTTTaGACACTCCCTCCACAGTTACTTCAAGCATCAGCC +
Preference number: 3 (lower is better)
Translates to: SSAKKVPASVVF*TLPPQLLQASA
Trigger: GGCTGATGCTTGAAGTAACTGTGGAGGGAGTGTTCAAAATACTACTGACGCAGGCACCTTCTTGGCGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR TCA 72 bp GATCCCAAGGTCCAAAAGGCATCAGGGTACTTACACTaGAAACTTCAAGCAAGTAGCACCAGGGCTCCCCCT +
Preference number: 3 (lower is better)
Translates to: DPKVQKASGYLH*KLQASSTRAPP
Trigger: AGGGGGAGCCCTGGTGCTACTTGCTTGAAGTTTTCAGTGTAAGTACCCTGATGCCTTTTGGACCTTGGGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR GCA 72 bp GAGATGCCTTTGACTCTCCAGCGCCAAGAAGGTGCCTaGGTCAGTAGTATTTTGAACACTCCCTCCACAGTT +
Preference number: 3 (lower is better)
Translates to: EMPLTLQRQEGA*VSSILNTPSTV
Trigger: AACTGTGGAGGGAGTGTTCAAAATACTACTGACGCAGGCACCTTCTTGGCGCTGGAGAGTCAAAGGCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CCA 72 bp CTCAAAGCTGGTCTGCTCATCCTCTTAGAAGAGGTCTaGTATCTGTGGAGTAGAGCCAAGAGAGGCACCACA +
Preference number: 3 (lower is better)
Translates to: LKAGLLILLEEV*YLWSRAKRGTT
Trigger: TGTGGTGCCTCTCTTGGCTCTACTCCACAGATACCAGACCTCTTCTAAGAGGATGAGCAGACCAGCTTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CCA 72 bp GAGAGAAATAAACTTGGGTTTTTAGGCACCAGAGATTaGAGCACCACCCATCCCTTCCAGAGGATGACAGAC +
Preference number: 3 (lower is better)
Translates to: ERNKLGFLGTRD*STTHPFQRMTD
Trigger: GTCTGTCATCCTCTGGAAGGGATGGGTGGTGCTCCAATCTCTGGTGCCTAAAAACCCAAGTTTATTTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTCTCTTCCATGTCTCTaGGACCCATGCTACCTTGCA +
Preference number: 3 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMSLPCL*DPCYLA
Trigger: TGCAAGGTAGCATGGGTCCAAGAGACATGGAAGAGA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGACCCCATCTCCTCTCTaGTATCCCTCTCCTGATTCT +
Preference number: 3 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMTPSPL*YPSPDS
Trigger: AGAATCAGGAGAGGGATACAAGAGAGGAGATGGGGT...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTGCGTCAGTAGTATTTaGAACACTCCCTCCACAGTT +
Preference number: 3 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGCVSSI*NTPSTV
Trigger: AACTGTGGAGGGAGTGTTCAAAATACTACTGACGCA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAACCCCATCTCCTCTCTaGTATCCCTCTCCTGATTCT +
Preference number: 3 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQTPSPL*YPSPDS
Trigger: AGAATCAGGAGAGGGATACAAGAGAGGAGATGGGGT...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTAATGACCAAGGTATTTaGGTCACAGAATGGTCTTCC +
Preference number: 3 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGNDQGI*VTEWSS
Trigger: GGAAGACCATTCTGTGACCAAAATACCTTGGTCATT...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTAAACTTAGAGCTACCTaGGAAGACAGCAGTACCAAA +
Preference number: 3 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGKLRAT*EDSSTK
Trigger: TTTGGTACTGCTGTCTTCCAAGGTAGCTCTAAGTTT...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTTTTATGGCTGGGCCTaGAGGACAATTCTGGTTGCA +
Preference number: 3 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDFYGWA*RTILVA
Trigger: TGCAACCAGAATTGTCCTCAAGGCCCAGCCATAAAA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR TCA 72 bp CTGGTGGGAAGCCAAGACAACATCTACAGAAAAGCTTaGTGTGTCACAACAAGGCTCAGCCATAGGGAAATA +
Preference number: 3 (lower is better)
Translates to: LVGSQDNIYRKA*CVTTRLSHREI
Trigger: TATTTCCCTATGGCTGAGCCTTGTTGTGACACATCAAGCTTTTCTGTAGATGTTGTCTTGGCTTCCCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR TCA 72 bp AAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTaGGGACAATTCTGGTTGCATTTAAATCTCAGTGCC +
Preference number: 3 (lower is better)
Translates to: KVERDNAFMAGP*GQFWLHLNLSA
Trigger: GGCACTGAGATTTAAATGCAACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR TCA 72 bp GTCCTTATTTCCTTGGTACCTGATCTCCAAAACTCTTaGTCTGATCCCAAGGTCCAAAAGGCATCAGGGTAC +
Preference number: 3 (lower is better)
Translates to: VLISLVPDLQNS*SDPKVQKASGY
Trigger: GTACCCTGATGCCTTTTGGACCTTGGGATCAGATCAAGAGTTTTGGAGATCAGGTACCAAGGAAATAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR GCA 72 bp CTCTCTAACAAGATACCAGAAGGTCGAGAGAGACAATaGTTTTATGGCTGGGCCTTGAGGACAATTCTGGTT +
Preference number: 3 (lower is better)
Translates to: LSNKIPEGRERQ*FYGWALRTILV
Trigger: AACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCTGGTATCTTGTTAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR GCA 72 bp GAAGTGCCATATCTTCCTCCCTTTCCCCAAAGCTACTaGTGCGACCTTTCTTTCATCCTTGTACATAAGTTA +
Preference number: 3 (lower is better)
Translates to: EVPYLPPFPQSY*CDLSFILVHKL
Trigger: TAACTTATGTACAAGGATGAAAGAAAGGTCGCAGCAGTAGCTTTGGGGAAAGGGAGGAAGATATGGCACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTTCTCTTCCATGTCTCTaGGACCCATGCTACCTTGCA +
Preference number: 3 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFSLPCL*DPCYLA
Trigger: TGCAAGGTAGCATGGGTCCAAGAGACATGGAAGAGA...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAATGCGTCAGTAGTATTTaGAACACTCCCTCCACAGTT +
Preference number: 3 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQCVSSI*NTPSTV
Trigger: AACTGTGGAGGGAGTGTTCAAAATACTACTGACGCA...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATAAACTTAGAGCTACCTaGGAAGACAGCAGTACCAAA +
Preference number: 3 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDKLRAT*EDSSTK
Trigger: TTTGGTACTGCTGTCTTCCAAGGTAGCTCTAAGTTT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGATAAGAACCACTGTCTaGCCACTAGCACATGCTTTG +
Preference number: 3 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSIRTTV*PLAHAL
Trigger: CAAAGCATGTGCTAGTGGCAAGACAGTGGTTCTTAT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR GCA 72 bp AAACATCATAAGAACCACTGTCTTGCCACTAGCACATaGTTTGGAGGAGTTCTGCAGAATGGAAACCTGAAA +
Preference number: 3 (lower is better)
Translates to: KHHKNHCLATST*FGGVLQNGNLK
Trigger: TTTCAGGTTTCCATTCTGCAGAACTCCTCCAAAGCATGTGCTAGTGGCAAGACAGTGGTTCTTATGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CCA 72 bp ATACCAGAAGGTCGAGAGAGACAATGCTTTTATGGCTaGGCCTTGAGGACAATTCTGGTTGCATTTAAATCT +
Preference number: 3 (lower is better)
Translates to: IPEGRERQCFYG*ALRTILVAFKS
Trigger: AGATTTAAATGCAACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCTGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCATCTACAGAAAAGCTaGATGTGTCACAACAAGGCT +
Preference number: 3 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSHLQKS*MCHNKA
Trigger: AGCCTTGTTGTGACACATCAAGCTTTTCTGTAGATG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACATCTACAGAAAAGCTaGATGTGTCACAACAAGGCT +
Preference number: 3 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQHLQKS*MCHNKA
Trigger: AGCCTTGTTGTGACACATCAAGCTTTTCTGTAGATG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCTGTGCATGGATGACTaGTATCTCAGCGTTAATAGA +
Preference number: 3 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSLCMDD*YLSVNR
Trigger: TCTATTAACGCTGAGATACAAGTCATCCATGCACAG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR GCA 72 bp GGTAAGAAGTGTAAGAAGAAACTGGGGTCAAACAAATaGTCATCAAAGCGTGGCACCAACAGAATTTTCACT +
Preference number: 3 (lower is better)
Translates to: GKKCKKKLGSNK*SSKRGTNRIFT
Trigger: AGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACCCCAGTTTCTTCTTACACTTCTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR GCA 72 bp TTTATTCTGAACCAGGCTGAGAAATATCCATTAAATTaGATTCTGTGTAGCACCCACAGAGTGCCAGTTGGA +
Preference number: 3 (lower is better)
Translates to: FILNQAEKYPLN*ILCSTHRVPVG
Trigger: TCCAACTGGCACTCTGTGGGTGCTACACAGAATGCAATTTAATGGATATTTCTCAGCCTGGTTCAGAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR-3UTR CAA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGAGGTCTCTTTTAATATaGGCTAGCAGAAAACCTATC +
Preference number: 3 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMRSLLI*ASRKPI
Trigger: GATAGGTTTTCTGCTAGCCAATATTAAAAGAGACCT...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR GCA 72 bp GGACAATTCTGGTTGCATTTAAATCTCAGTGCCAAATaGACTAGGTTCCCTGCCGTTATAATTTTTGGATCA +
Preference number: 3 (lower is better)
Translates to: GQFWLHLNLSAK*TRFPAVIIFGS
Trigger: TGATCCAAAAATTATAACGGCAGGGAACCTAGTGCATTTGGCACTGAGATTTAAATGCAACCAGAATTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR TCA 72 bp CATGATTTTCCTAGTGAAAGCCCCCTACCTATTATTTaGAAATTTGACAGTTTATACAAACTGAGCCAAGAT +
Preference number: 3 (lower is better)
Translates to: HDFPSESPLPII*KFDSLYKLSQD
Trigger: ATCTTGGCTCAGTTTGTATAAACTGTCAAATTTTCAAATAATAGGTAGGGGGCTTTCACTAGGAAAATCATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR GCA 72 bp AGAATGGTCTTCCTCCTCCCAGCCAACCCCTGTGAATaGATCTCTATATATCTTTATATATATATATATATA +
Preference number: 3 (lower is better)
Translates to: RMVFLLPANPCE*ISIYLYIYIYI
Trigger: TATATATATATATATATAAAGATATATAGAGATGCATTCACAGGGGTTGGCTGGGAGGAGGAAGACCATTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CAA 72 bp GGCTCTCTCTTCCATGTCTCTTGGACCCATGCTACCTaGCATCCCGGGGTTAAGGGGTATGGCCCATATGTC +
Preference number: 4 (lower is better)
Translates to: GSLFHVSWTHAT*HPGVKGYGPYV
Trigger: GACATATGGGCCATACCCCTTAACCCCGGGATGCAAGGTAGCATGGGTCCAAGAGACATGGAAGAGAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTCTGGCCCCGGGTGCCTaGTCTCAGAAGCCATTGCCA +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGLAPGA*SQKPLP
Trigger: TGGCAATGGCTTCTGAGATCAGGCACCCGGGGCCAG...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGTAGGGGCAGGTGCATaGTTCCCGCCGGGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDVGAGA*FPPGPP
Trigger: CGGAGGACCCGGCGGGAAGCATGCACCTGCCCCTAC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGTAGGGGCAGGTGCATaGTTCCCGCCGGGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPVGAGA*FPPGPP
Trigger: CGGAGGACCCGGCGGGAAGCATGCACCTGCCCCTAC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTACAGTAGGGGCAGGTaGATGCTTCCCGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGYSRGR*MLPAGS
Trigger: GGACCCGGCGGGAAGCATGCACCTGCCCCTACTGTA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCCTCACCTGTTCCCCCTaGCTGACTCGGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGALTCSP*LTRALG
Trigger: TCCCAGGGCCCGAGTCAGTCAGGGGGAACAGGTGAG...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGACCCCTGTAGCCCACTaGCCCTCTGGGGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMTPVAH*PSGVSG
Trigger: GCCAGACACCCCAGAGGGTCAGTGGGCTACAGGGGT...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGTCCTCCGACCGGCTTaGGGTTGGGCATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPVLRPA*GWASGL
Trigger: CAGCCCAGATGCCCAACCCCAAGCCGGTCGGAGGAC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGCTCATGGTGGCAGCTaGGGGACAAGCTCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDAHGGS*GTSSRG
Trigger: CCCCCTTGAGCTTGTCCCTCAGCTGCCACCATGAGC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327443.9
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGACCCCTGTAGCCCACTaGCCCTCTGGGGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSTPVAH*PSGVSG
Trigger: GCCAGACACCCCAGAGGGTCAGTGGGCTACAGGGGT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTCTGAGGCAATGGGTGTaGGAGTGGTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGLRQWV*EWCCCC
Trigger: GCAGCAGCAACACCACTCTCACACCCATTGCCTCAG...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGCCCTCCTCCTCCAGTaGTGCTGCTACTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPALLLQ*CCYCLC
Trigger: GCACAGGCAGTAGCAGCAGCACTGGAGGAGGAGGGC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGATGGCTGGGACTCCTaGCCTCCTCCTCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPDGWDS*PPPPVL
Trigger: CAGCACTGGAGGAGGAGGGCAGGAGTCCCAGCCATC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGATGGCTGGGACTCCTaGCCTCCTCCTCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDDGWDS*PPPPVL
Trigger: CAGCACTGGAGGAGGAGGGCAGGAGTCCCAGCCATC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCTACAGTAGGGGCAGGTaGATGCTTCCCGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAYSRGR*MLPAGS
Trigger: GGACCCGGCGGGAAGCATGCACCTGCCCCTACTGTA...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGCCAAAGGGGATGGCTaGGACTCCTGCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPAKGDG*DSCPPP
Trigger: AGGAGGAGGGCAGGAGTCCCAGCCATCCCCTTTGGC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGCACTTGGGCCCCAGTaGCAGCAAACTGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGALGPQ*QQTAAV
Trigger: AACAGCTGCAGTTTGCTGCCACTGGGGCCCAAGTGC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTTATTAGCCAGGCCTTaGAGGGGGACAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGLLARP*RGTACW
Trigger: CCAGCAGGCTGTCCCCCTCCAAGGCCTGGCTAATAA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGTCCTCCGACCGGCTTaGGGTTGGGCATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQVLRPA*GWASGL
Trigger: CAGCCCAGATGCCCAACCCCAAGCCGGTCGGAGGAC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTGGGGTGTCTGGCCTTaGGAGTTGGTCCCTGATGAT +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGWGVWP*ELVPDD
Trigger: ATCATCAGGGACCAACTCTCAAGGCCAGACACCCCA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTCTGGCCTGCTTGCAATaGGCCTCCAGATGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGLACLQ*ASRCLV
Trigger: AACCAGACATCTGGAGGCTCATTGCAAGCAGGCCAG...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATAGTGCCACTGCCTTCTaGACCTGCCCCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDSATAF*TCPTVQ
Trigger: CTGGACAGTGGGGCAGGTTCAGAAGGCAGTGGCACT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGGTGGTAATAAGGGCTaGAGGAGTGGCAGTGCCACT +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGGGNKG*RSGSAT
Trigger: AGTGGCACTGCCACTCCTTCAGCCCTTATTACCACC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACTGGCCCCGGGTGCCTaGTCTCAGAAGCCATTGCCA +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQLAPGA*SQKPLP
Trigger: TGGCAATGGCTTCTGAGATCAGGCACCCGGGGCCAG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGAAGGGAGATGCCTTTaGCTCTCCAGCGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGEGRCL*LSSAKK
Trigger: CTTCTTGGCGCTGGAGAGTCAAAGGCATCTCCCTTC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGCCAGAACCATCCTGCTaGACTTGGGCCCCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMPEPSC*TWAPVA
Trigger: TGCCACTGGGGCCCAAGTGCAGCAGGATGGTTCTGG...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCACCAGAACCATCCTGCTaGACTTGGGCCCCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPPEPSC*TWAPVA
Trigger: TGCCACTGGGGCCCAAGTGCAGCAGGATGGTTCTGG...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTGGAGGGGGACAGCCTaGTGGAGTAGGTTTGGCATA +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGWRGTA*WSRFGI
Trigger: TATGCCAAACCTACTCCAGCAGGCTGTCCCCCTCCA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGAGTGGCAGTGCCACTaGCTTCTGAACCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPEWQCH*LLNLPH
Trigger: GTGGGGCAGGTTCAGAAGGCAGTGGCACTGCCACTC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGCCAAAGGGGATGGCTaGGACTCCTGCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQAKGDG*DSCPPP
Trigger: AGGAGGAGGGCAGGAGTCCCAGCCATCCCCTTTGGC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTATTGGGCCCCACTGTTaGTGTCCGGATGATGATGGG +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGIGPHC*CPDDDG
Trigger: CCCATCATCATCCGGACACCAACAGTGGGGCCCAAT...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATGGCCCATATGTCTCTaGCCCCGGGTGCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPWPICL*PRVPDL
Trigger: GAGATCAGGCACCCGGGGCCAGAGACATATGGGCCA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTGGCCCATATGTCTCTaGCCCCGGGTGCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDWPICL*PRVPDL
Trigger: GAGATCAGGCACCCGGGGCCAGAGACATATGGGCCA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CAA 72 bp CTCCAGCGCCAAGAAGGTGCCTGCGTCAGTAGTATTTaGAACACTCCCTCCACAGTTACTTCAAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: LQRQEGACVSSI*NTPSTVTSSIS
Trigger: GCTGATGCTTGAAGTAACTGTGGAGGGAGTGTTCAAAATACTACTGACGCAGGCACCTTCTTGGCGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGCTACTTCGAGCCTGTaGAAAGGCACCACCACCATT +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGATSSL*KGTTTI
Trigger: AATGGTGGTGGTGCCTTTTCACAGGCTCGAAGTAGC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTCTCACCTGTTCCCCCTaGCTGACTCGGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFLTCSP*LTRALG
Trigger: TCCCAGGGCCCGAGTCAGTCAGGGGGAACAGGTGAG...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTGTAAAGGTCTGCCCTaGCAATGGTGCTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGCKGLP*QWCCLE
Trigger: CTCCAAGCAGCACCATTGTCAGGGCAGACCTTTACA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGTAGAGTCTGCCAACTaGCCTGTCCATTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPVESAN*PVHWAP
Trigger: TGGGGCCCAATGGACAGGTCAGTTGGCAGACTCTAC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGCTGAGGCAATGGGTGTaGGAGTGGTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMLRQWV*EWCCCC
Trigger: GCAGCAGCAACACCACTCTCACACCCATTGCCTCAG...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGCCAACGGCAGGCCTTaGATTGGGTGCACCTGGATT +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPANGRP*IGCTWI
Trigger: AATCCAGGTGCACCCAATTCAAGGCCTGCCGTTGGC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGCTCATCCGAACGTGTaGAGCGTTTCCCACAGTATG +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGAHPNV*SVSHSM
Trigger: CATACTGTGGGAAACGCTTCACACGTTCGGATGAGC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGAGTGCCACTGCCTTCTaGACCTGCCCCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSSATAF*TCPTVQ
Trigger: CTGGACAGTGGGGCAGGTTCAGAAGGCAGTGGCACT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGCAAACTGCAGCTGTTaGCCATCAACGGTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGANCSC*PSTVWN
Trigger: GTTCCAGACCGTTGATGGGCAACAGCTGCAGTTTGC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTTGCTGCTGCTGGTCTaGCCCAAGGAAACACCCTGC +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDLLLLV*PKETPC
Trigger: GCAGGGTGTTTCCTTGGGGCAGACCAGCAGCAGCAA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCATGCCAGCGCAAGTGTaGCCGCAGGTGAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAMPAQV*PQVRGL
Trigger: AAGACCTCTCACCTGCGGGCACACTTGCGCTGGCAT...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGAGTGGCAGTGCCACTaGCTTCTGAACCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSEWQCH*LLNLPH
Trigger: GTGGGGCAGGTTCAGAAGGCAGTGGCACTGCCACTC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATGGCAAGACGGGCAATaGCCTCTGGACAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPWQDGQ*PLDRWP
Trigger: AGGCCATCTGTCCAGAGGGCATTGCCCGTCTTGCCA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGTCTCTGGCCCCGGGTaGCTGATCTCAGAAGCCATT +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPVSGPG*LISEAI
Trigger: AATGGCTTCTGAGATCAGGCACCCGGGGCCAGAGAC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCGGACCCATGCTACCTTaGATCCCGGGGTTAAGGGGT +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAGPMLP*IPGLRG
Trigger: ACCCCTTAACCCCGGGATGCAAGGTAGCATGGGTCC...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTCCGGGGTTGGAGAAGTaGCATATCTTCCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGPGLEK*HIFLPF
Trigger: GAAAGGGAGGAAGATATGGCACTTCTCCAACCCCGG...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGACAATGGTGCTGCTTaGAGGGCCTGGAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSDNGAA*RAWRAC
Trigger: ACAGGCCCTCCAGGCCCTCCAAGCAGCACCATTGTC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGACAATGGTGCTGCTTaGAGGGCCTGGAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQDNGAA*RAWRAC
Trigger: ACAGGCCCTCCAGGCCCTCCAAGCAGCACCATTGTC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTAAAGTTGTGTGGCTGTaGGGTCAAGCTCACCTGTTC +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGKVVWL*GQAHLF
Trigger: GAACAGGTGAGCTTGACCTCACAGCCACACAACTTT...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATCAGAGGAGGAAGAGATaGTCTGCCAGCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDQRRKR*SASHWH
Trigger: GTGCCAATGGCTGGCAGATCATCTCTTCCTCCTCTG...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCCAGAGGAGGAAGAGATaGTCTGCCAGCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAQRRKR*SASHWH
Trigger: GTGCCAATGGCTGGCAGATCATCTCTTCCTCCTCTG...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCGAGTTTGGAACAGCCTaGAGCTGGAGGTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAEFGTA*SWRFWR
Trigger: CCTCCAGAACCTCCAGCTTCAGGCTGTTCCAAACTC...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGAGTTTGGAACAGCCTaGAGCTGGAGGTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDEFGTA*SWRFWR
Trigger: CCTCCAGAACCTCCAGCTTCAGGCTGTTCCAAACTC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGTAGAGTCTGCCAACTaGCCTGTCCATTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSVESAN*PVHWAP
Trigger: TGGGGCCCAATGGACAGGTCAGTTGGCAGACTCTAC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTGGGCTTGTGGGTTCTaGACTTGGAGGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMWACGF*TWRFCS
Trigger: GCTGCAGAACCTCCAAGTTCAGAACCCACAAGCCCA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATGGGCTTGTGGGTTCTaGACTTGGAGGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPWACGF*TWRFCS
Trigger: GCTGCAGAACCTCCAAGTTCAGAACCCACAAGCCCA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGAGCAGCATTCACAGTaGCTGTGCCAGCAGGAATGG +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPEQHSQ*LCQQEW
Trigger: CCATTCCTGCTGGCACAGTCACTGTGAATGCTGCTC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGCCAACGGCAGGCCTTaGATTGGGTGCACCTGGATT +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQANGRP*IGCTWI
Trigger: AATCCAGGTGCACCCAATTCAAGGCCTGCCGTTGGC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGGTGGTAATAAGGGCTaGAGGAGTGGCAGTGCCACT +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPGGNKG*RSGSAT
Trigger: AGTGGCACTGCCACTCCTTCAGCCCTTATTACCACC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGGAGCTTCCTTGGTGTaGAGAGAACAGGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMGASLV*REQGKW
Trigger: CCACTTGCCCTGTTCTCTTCACACCAAGGAAGCTCC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGGAGCTTCCTTGGTGTaGAGAGAACAGGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDGASLV*REQGKW
Trigger: CCACTTGCCCTGTTCTCTTCACACCAAGGAAGCTCC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTCCTGTGGAAGAGACTaGGTGGCTCACTACTGCTGG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDSCGRD*VAHYCW
Trigger: CCAGCAGTAGTGAGCCACTCAGTCTCTTCCACAGGA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATCCTGTGGAAGAGACTaGGTGGCTCACTACTGCTGG +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPSCGRD*VAHYCW
Trigger: CCAGCAGTAGTGAGCCACTCAGTCTCTTCCACAGGA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATGCTGCTACTGCCTGTaGTGCTACTTCGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPCCYCL*CYFEPV
Trigger: CACAGGCTCGAAGTAGCAGCACAGGCAGTAGCAGCA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATCAGTGCTGCTGCTACTaGCTGTGCTGCTACTTCGAG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDQCCCY*LCCYFE
Trigger: CTCGAAGTAGCAGCACAGGCAGTAGCAGCAGCACTG...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTCTGCTGCAAGTTGCTaGCAGCAGAGCCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDSAASC*QQSQRG
Trigger: TCCCCTTTGGCTCTGCTGGCAGCAACTTGCAGCAGA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTGGGTGACTCAATTCTaGTGCAAGTTGCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGWVTQF*CKLLPA
Trigger: TGCTGGCAGCAACTTGCAGCAGAATTGAGTCACCCA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTGCCATTGGTACTGCTaGCACTCTGTTCCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGCHWYC*HSVPLR
Trigger: CCTCAAAGGAACAGAGTGGCAGCAGTACCAATGGCA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTGCTGCCATTGGTACTaGTGCCACTCTGTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGCCHWY*CHSVPL
Trigger: CAAAGGAACAGAGTGGCAGCAGTACCAATGGCAGCA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTAAGACTCACTGCCATTaGTGCCATTGGTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGKTHCH*CHWYCC
Trigger: GCAGCAGTACCAATGGCAGCAATGGCAGTGAGTCTT...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGCAGCCACAACATACTaGCCACCAGAGACTGTGCGA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDAATTY*PPETVR
Trigger: TCGCACAGTCTCTGGTGGGCAGTATGTTGTGGCTGC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGCTGCTGATCGTGACTaGCTGAGAGCTGGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMAADRD*LRAGSQ
Trigger: TTGACTCCCAGCTCTCAGGCAGTCACGATCAGCAGC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAATTGCTGCTGCTGGTCTaGCCCAAGGAAACACCCTGC +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQLLLLV*PKETPC
Trigger: GCAGGGTGTTTCCTTGGGGCAGACCAGCAGCAGCAA...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAATCACCTGGGGCATTTaGTATAGCCAACGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPITWGI*YSQRQA
Trigger: GGCCTGCCGTTGGCTATAGCAAATGCCCCAGGTGAT...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGATGCCAGCGCAAGTGTaGCCGCAGGTGAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSMPAQV*PQVRGL
Trigger: AAGACCTCTCACCTGCGGGCACACTTGCGCTGGCAT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTGTCCAGGGGCAAAGTaGCCACACTCAGAGCTACAC +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMCPGAK*PHSELH
Trigger: GTGTAGCTCTGAGTGTGGGCACTTTGCCCCTGGACA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAATGGCAAGACGGGCAATaGCCTCTGGACAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQWQDGQ*PLDRWP
Trigger: AGGCCATCTGTCCAGAGGGCATTGCCCGTCTTGCCA...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGGACCCATGCTACCTTaGATCCCGGGGTTAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQGPMLP*IPGLRG
Trigger: ACCCCTTAACCCCGGGATGCAAGGTAGCATGGGTCC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTGTCTCTTGGACCCATaGTACCTTGCATCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMCLLDP*YLASRG
Trigger: ACCCCGGGATGCAAGGTAGCATGGGTCCAAGAGACA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCGATGATACAGATGGGTaGCGGGACCCCATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGADDTDG*RDPISS
Trigger: AGAGGAGATGGGGTCCCGGCACCCATCTGTATCATC...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTCTGGGGTCAAACAAATaGTCATCAAAGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGLGSNK*SSKRGT
Trigger: GGTGCCACGCTTTGATGAGCATTTGTTTGACCCCAG...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGGGCATCCCCTGCCCTaGAAGTTTTGGTCATCTAAA +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGGHPLP*KFWSSK
Trigger: TTTAGATGACCAAAACTTGCAGGGCAGGGGATGCCC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCTTGGTCGCTCATGGTaGCAGCTGAGGGACAAGCTC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSLGRSW*QLRDKL
Trigger: GAGCTTGTCCCTCAGCTGCCACCATGAGCGACCAAG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327443.9
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGATCTTGGTCGCTCATaGTGGCAGCTGAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMDLGRS*WQLRDK
Trigger: CTTGTCCCTCAGCTGCCACCATGAGCGACCAAGATC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327443.9
CDS-3UTR CCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTCCCATTCAGGGCCACTaGTACATTGGTCACATACTG +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGPIQGH*YIGHIL
Trigger: CAGTATGTGACCAATGTACCAGTGGCCCTGAATGGG...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATATTGGGCCCCACTGTTaGTGTCCGGATGATGATGGG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDIGPHC*CPDDDG
Trigger: CCCATCATCATCCGGACACCAACAGTGGGGCCCAAT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTCTGGAGGCCTGGCATaGAGGAGAGTTGAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMSGGLA*RRVEQH
Trigger: ATGCTGCTCAACTCTCCTCCATGCCAGGCCTCCAGA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGCTGAGGTTAATGGTCTaGAGGCCTGGCATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMLRLMV*RPGMEE
Trigger: CTCCTCCATGCCAGGCCTCCAGACCATTAACCTCAG...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACGACCGGCTTGGGGTTaGGCATCTGGGCTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQRPAWG*ASGLFS
Trigger: AGAAAACAGCCCAGATGCCCAACCCCAAGCCGGTCG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGCAGGAAGGGTAGGCTaGGGTAAGAAGTGTAAGAAG +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGAGRVG*GKKCKK
Trigger: CTTCTTACACTTCTTACCCCAGCCTACCCTTCCTGC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATATCTCACCACTCTTCTaGGCATCCCCTGCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDISPLF*ASPALQ
Trigger: TTGCAGGGCAGGGGATGCCCAGAAGAGTGGTGAGAT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGCCATTGGCACCCTGTaGAAGTTGTGTGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSAIGTL*KLCGCE
Trigger: CTCACAGCCACACAACTTTCACAGGGTGCCAATGGC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGCCATTGGCACCCTGTaGAAGTTGTGTGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQAIGTL*KLCGCE
Trigger: CTCACAGCCACACAACTTTCACAGGGTGCCAATGGC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGAGCAGCATTCACAGTaGCTGTGCCAGCAGGAATGG +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQEQHSQ*LCQQEW
Trigger: CCATTCCTGCTGGCACAGTCACTGTGAATGCTGCTC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGTGCACCTGGATTCCTaGAGTACCCAATGCACTGAG +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPVHLDS*STQCTE
Trigger: CTCAGTGCATTGGGTACTTCAGGAATCCAGGTGCAC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGCTCATCCGAACGTGTaGAGCGTTTCCCACAGTATG +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMAHPNV*SVSHSM
Trigger: CATACTGTGGGAAACGCTTCACACGTTCGGATGAGC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTCCCAGCCAACCCCTGTaGATGCATCTCTATATATCT +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGPSQPL*MHLYIS
Trigger: AGATATATAGAGATGCATTCACAGGGGTTGGCTGGG...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTACTGTACATTCCAGTaGGTTATCCTGCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGYCTFQ*VILPLS
Trigger: GGAAAGGGGCAGGATAACTCACTGGAATGTACAGTA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATCCAGTTGGAAATCCCTaGAGGAAGACGGTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDPVGNP*RKTVWV
Trigger: AACCCACACCGTCTTCCTTCAGGGATTTCCAACTGG...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCCCAGTTGGAAATCCCTaGAGGAAGACGGTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAPVGNP*RKTVWV
Trigger: AACCCACACCGTCTTCCTTCAGGGATTTCCAACTGG...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGGCCCTGGGAGTTGTTaGTGTTCTCATTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPGPGSC*CSHWVT
Trigger: AGTCACCCAATGAGAACAGCAACAACTCCCAGGGCC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGGCCCTGGGAGTTGTTaGTGTTCTCATTGGGTGACT +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMGPGSC*CSHWVT
Trigger: AGTCACCCAATGAGAACAGCAACAACTCCCAGGGCC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCGAGGAAGAGATGATCTaGCAGCCATTGGCACCCTGT +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAEEEMI*QPLAPC
Trigger: ACAGGGTGCCAATGGCTGGCAGATCATCTCTTCCTC...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGACTCACTGCCATTGCTaGCATTGGTACTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMTHCHC*HWYCCH
Trigger: GTGGCAGCAGTACCAATGGCAGCAATGGCAGTGAGT...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCACTCACTGCCATTGCTaGCATTGGTACTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGATHCHC*HWYCCH
Trigger: GTGGCAGCAGTACCAATGGCAGCAATGGCAGTGAGT...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGCAGCCACAACATACTaGCCACCAGAGACTGTGCGA +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQAATTY*PPETVR
Trigger: TCGCACAGTCTCTGGTGGGCAGTATGTTGTGGCTGC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCCAGTGGCAGCAAACTaGAGCTGTTGCCCATCAACG +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSPVAAN*SCCPST
Trigger: CGTTGATGGGCAACAGCTGCAGTTTGCTGCCACTGG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGTGGAGGGGGACAGCCTaGTGGAGTAGGTTTGGCATA +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSWRGTA*WSRFGI
Trigger: TATGCCAAACCTACTCCAGCAGGCTGTCCCCCTCCA...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGGGAGTCAAGGTAGCTaGAGAAACGCTGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDGSQGS*RNAVDR
Trigger: CCTGTCAACAGCGTTTCTGCAGCTACCTTGACTCCC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGGGAGTCAAGGTAGCTaGAGAAACGCTGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPGSQGS*RNAVDR
Trigger: CCTGTCAACAGCGTTTCTGCAGCTACCTTGACTCCC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTGCTCTCCTTCTTTTTaGTGGCCTGCTTGCAATGAG +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGCSPSF*WPACNE
Trigger: CTCATTGCAAGCAGGCCAGCAAAAAGAAGGAGAGCA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGATCACCTGGGGCATTTaGTATAGCCAACGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSITWGI*YSQRQA
Trigger: GGCCTGCCGTTGGCTATAGCAAATGCCCCAGGTGAT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCTATGCTGTTTCTTTTTaGCAGGATCCCCCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAYAVSF*QDPPSP
Trigger: GGGGCTCGGGGGATCCTGGCAAAAAGAAACAGCATA...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTATGCTGTTTCTTTTTaGCAGGATCCCCCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDYAVSF*QDPPSP
Trigger: GGGGCTCGGGGGATCCTGGCAAAAAGAAACAGCATA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTGCAGATCTGCCACCTaGATGACGTTGATGCCACTG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDCRSAT*MTLMPL
Trigger: CAGTGGCATCAACGTCATGCAGGTGGCAGATCTGCA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGTGTCTCTTGGACCCATaGTACCTTGCATCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSCLLDP*YLASRG
Trigger: ACCCCGGGATGCAAGGTAGCATGGGTCCAAGAGACA...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGCTTCTGGGCATCCCCTaGCCTGCAAGTTTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMLLGIP*PASFGH
Trigger: ATGACCAAAACTTGCAGGGCAGGGGATGCCCAGAAG...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTCCCCAAAGCTACTGCTaGGACCTTTCTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGPQSYC*DLSFIL
Trigger: AAGGATGAAAGAAAGGTCGCAGCAGTAGCTTTGGGG...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGCTGGTTCTGTAAGTTaGGAGCGGCAGCCACAACAT +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMAGSVS*ERQPQH
Trigger: ATGTTGTGGCTGCCGCTCCCAACTTACAGAACCAGC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCTCTGGCCTTGAGAGTTaGTCCCTGATGATCCACTGG +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGASGLES*SLMIHW
Trigger: CCAGTGGATCATCAGGGACCAACTCTCAAGGCCAGA...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCGATGGGACCAGAGTTTaGAACAGCCTGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGADGTRV*NSLKLE
Trigger: CTCCAGCTTCAGGCTGTTCCAAACTCTGGTCCCATC...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGATGGGACCAGAGTTTaGAACAGCCTGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMDGTRV*NSLKLE
Trigger: CTCCAGCTTCAGGCTGTTCCAAACTCTGGTCCCATC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAATGGTGTTGCTGCTGCTaGTCTGCCCCAAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQWCCCC*SAPRKH
Trigger: GTGTTTCCTTGGGGCAGACCAGCAGCAGCAACACCA...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAAATGGTCTGGAGGCCTaGCATGGAGGAGAGTTGAGC +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQNGLEA*HGGELS
Trigger: GCTCAACTCTCCTCCATGCCAGGCCTCCAGACCATT...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACTGAGGTTAATGGTCTaGAGGCCTGGCATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQLRLMV*RPGMEE
Trigger: CTCCTCCATGCCAGGCCTCCAGACCATTAACCTCAG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTTGGGGTTGGGCATCTaGGCTGTTTTCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMLGLGI*AVFSFL
Trigger: GAGGAAGGAGAAAACAGCCCAGATGCCCAACCCCAA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTGCCCTCTGGACAGATaGCCTCCATGGCTACCATAT +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMCPLDR*PPWLPY
Trigger: ATATGGTAGCCATGGAGGCCATCTGTCCAGAGGGCA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTACGGGCAATGCCCTCTaGACAGATGGCCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFTGNAL*TDGLHG
Trigger: GCCATGGAGGCCATCTGTCCAGAGGGCATTGCCCGT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGATCTCACCACTCTTCTaGGCATCCCCTGCCCTGCAA +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSISPLF*ASPALQ
Trigger: TTGCAGGGCAGGGGATGCCCAGAAGAGTGGTGAGAT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTTAGGCACCAGAGATTaGAGCACCACCCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMLGTRD*STTHPF
Trigger: GAAGGGATGGGTGGTGCTCCAATCTCTGGTGCCTAA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATTAGGCACCAGAGATTaGAGCACCACCCATCCCTTC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPLGTRD*STTHPF
Trigger: GAAGGGATGGGTGGTGCTCCAATCTCTGGTGCCTAA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGAAAGTTGTGTGGCTGTaGGGTCAAGCTCACCTGTTC +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMKVVWL*GQAHLF
Trigger: GAACAGGTGAGCTTGACCTCACAGCCACACAACTTT...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAATGTAAAGGTCTGCCCTaGCAATGGTGCTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQCKGLP*QWCCLE
Trigger: CTCCAAGCAGCACCATTGTCAGGGCAGACCTTTACA...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGTCCTGGGAGATGGCTTaGGTTGTAAAGGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSSWEMA*VVKVCP
Trigger: AGGGCAGACCTTTACAACTCAAGCCATCTCCCAGGA...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGCATTGGGGCTAAGGTaGTTGTTTGGGCTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSALGLR*LFGLVG
Trigger: ACCCACAAGCCCAAACAATCACCTTAGCCCCAATGC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGAGGAATGGAAGCAGCTaGGGCAATGGGTGTGAGAGT +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSRNGSS*GNGCES
Trigger: ACTCTCACACCCATTGCCTCAGCTGCTTCCATTCCT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTAAGCTGCTTCTGTTTTaGGGCCAAACAAGATACTGG +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGKLLLF*GQTRYW
Trigger: CCAGTATCTTGTTTGGCCTCAAAACAGAAGCAGCTT...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGGCAACCTGAAAACCTaGAAGGATGAGGGAATAAGT +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGGNLKT*KDEGIS
Trigger: ACTTATTCCCTCATCCTTTCAGGTTTTCAGGTTGCC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGAGCATAACAGGGGCCTaGTTAGCACCCCAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSSITGA*LAPQKN
Trigger: GTTCTTCTGGGGTGCTAATCAGGCCCCTGTTATGCT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATATTTCATCCATGGAGTaGTCTTGGTCAGAGGGCGGA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDISSME*SWSEGG
Trigger: TCCGCCCTCTGACCAAGATCACTCCATGGATGAAAT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426431.2
CDS-3UTR GCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGAATTCTGCTGCAAGTTaGTGCCAGCAGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMNSAAS*CQQSQR
Trigger: CCTTTGGCTCTGCTGGCAGCAACTTGCAGCAGAATT...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCAATTCTGCTGCAAGTTaGTGCCAGCAGAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGANSAAS*CQQSQR
Trigger: CCTTTGGCTCTGCTGGCAGCAACTTGCAGCAGAATT...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATGCTGCCATTGGTACTaGTGCCACTCTGTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPCCHWY*CHSVPL
Trigger: CAAAGGAACAGAGTGGCAGCAGTACCAATGGCAGCA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATAAGACTCACTGCCATTaGTGCCATTGGTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDKTHCH*CHWYCC
Trigger: GCAGCAGTACCAATGGCAGCAATGGCAGTGAGTCTT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGCCCACCAGAGACTGTaGGATTCTTGGAAGACTCAC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSAHQRL*DSWKTH
Trigger: GTGAGTCTTCCAAGAATCGCACAGTCTCTGGTGGGC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGCAAACTGCAGCTGTTaGCCATCAACGGTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQANCSC*PSTVWN
Trigger: GTTCCAGACCGTTGATGGGCAACAGCTGCAGTTTGC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTTTTGCTGGCCTGCTTaGAATGAGCCTCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDFCWPA*NEPPDV
Trigger: GACATCTGGAGGCTCATTGCAAGCAGGCCAGCAAAA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATTTTGCTGGCCTGCTTaGAATGAGCCTCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPFCWPA*NEPPDV
Trigger: GACATCTGGAGGCTCATTGCAAGCAGGCCAGCAAAA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTGCAGCTGTAGAGTCTaGCAACTGACCTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMCSCRV*QLTCPL
Trigger: CAATGGACAGGTCAGTTGGCAGACTCTACAGCTGCA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAATGCAGATCTGCCACCTaGATGACGTTGATGCCACTG +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQCRSAT*MTLMPL
Trigger: CAGTGGCATCAACGTCATGCAGGTGGCAGATCTGCA...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATCTGGGGTCAAACAAATaGTCATCAAAGCGTGGCACC +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDLGSNK*SSKRGT
Trigger: GGTGCCACGCTTTGATGAGCATTTGTTTGACCCCAG...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGTAGCACCCACAGAGTaGCAGTTGGAAATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDVAPTE*QLEIPE
Trigger: TTCAGGGATTTCCAACTGGCACTCTGTGGGTGCTAC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTTTCCCCAAAGCTACTaGTGCGACCTTTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGFPQSY*CDLSFI
Trigger: GATGAAAGAAAGGTCGCAGCAGTAGCTTTGGGGAAA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACCGGGGTTGGAGAAGTaGCATATCTTCCTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQPGLEK*HIFLPF
Trigger: GAAAGGGAGGAAGATATGGCACTTCTCCAACCCCGG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTGTTGCTGTTCTCATTaGGTGACTCAATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGCCCSH*VTQFCC
Trigger: GCAGCAGAATTGAGTCACCCAATGAGAACAGCAACA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGCTGGTTCTGTAAGTTaGGAGCGGCAGCCACAACAT +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSAGSVS*ERQPQH
Trigger: ATGTTGTGGCTGCCGCTCCCAACTTACAGAACCAGC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATCCTGTCAGAACTTGCTaGTTCTGTAAGTTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDPVRTC*FCKLGA
Trigger: CGCTCCCAACTTACAGAACCAGCAAGTTCTGACAGG...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTTTATTAGCCAGGCCTTaGAGGGGGACAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFLLARP*RGTACW
Trigger: CCAGCAGGCTGTCCCCCTCCAAGGCCTGGCTAATAA...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGGGCCACTGGTACATTaGTCACATACTGAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMGPLVH*SHTESV
Trigger: GACAGACTCAGTATGTGACCAATGTACCAGTGGCCC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCACCCATTCAGGGCCACTaGTACATTGGTCACATACTG +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPPIQGH*YIGHIL
Trigger: CAGTATGTGACCAATGTACCAGTGGCCCTGAATGGG...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGTTGGGGTTGGGCATCTaGGCTGTTTTCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSLGLGI*AVFSFL
Trigger: GAGGAAGGAGAAAACAGCCCAGATGCCCAACCCCAA...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTACTTTCCCACAGCCTTaGATGTGGCAAATATGCTGT +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGTFPQP*MWQICC
Trigger: ACAGCATATTTGCCACATCCAAGGCTGTGGGAAAGT...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCCCAGGTACACATAAATaGCCTCTCGCCTGTATGCCA +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAPGTHK*PLACMP
Trigger: TGGCATACAGGCGAGAGGCCATTTATGTGTACCTGG...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATACTCAGAGCTACACCTaGGCCTCCCTTCTTATTCTG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDTQSYT*ASLLIL
Trigger: CAGAATAAGAAGGGAGGCCCAGGTGTAGCTCTGAGT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAACTCAGAGCTACACCTaGGCCTCCCTTCTTATTCTG +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPTQSYT*ASLLIL
Trigger: CAGAATAAGAAGGGAGGCCCAGGTGTAGCTCTGAGT...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCGATCTGGAGCTTCCTTaGTGTGAAGAGAACAGGGCA +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGADLELP*CEENRA
Trigger: TGCCCTGTTCTCTTCACACCAAGGAAGCTCCAGATC...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGTGGCTCACTACTGCTaGGAGACAAAAGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPVAHYC*ETKEAA
Trigger: AGCAGCTTCTTTTGTCTCCCAGCAGTAGTGAGCCAC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGTGGAAGAGACTGAGTaGCTCACTACTGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSVEETE*LTTAGR
Trigger: TCTCCCAGCAGTAGTGAGCCACTCAGTCTCTTCCAC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCCCACAGAGTGCCAGTTaGAAATCCCTGAAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAPQSAS*KSLKED
Trigger: GTCTTCCTTCAGGGATTTCCAACTGGCACTCTGTGG...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCTGGGGGCTGGTGTTTTaGGAAGGCAGACAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAWGLVF*EGRQRE
Trigger: TTCTCTTTGTCTGCCTTCCCAAAACACCAGCCCCCA...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATATTTCATCCATGGAGTaGTCTTGGTCGCTCATGGTG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDISSME*SWSLMV
Trigger: CACCATGAGCGACCAAGATCACTCCATGGATGAAAT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327443.9
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGGTATGATCTGTATTTaGCCAGAACCATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPGMICI*PEPSCC
Trigger: GCAGCAGGATGGTTCTGGTCAAATACAGATCATACC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCAGCTATTGGCATTGGTaGAAAAGGAGCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGASYWHW*KRSWNW
Trigger: CCAGTTCCAGCTCCTTTTTCACCAATGCCAATAGCT...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGAGCTATTGGCATTGGTaGAAAAGGAGCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMSYWHW*KRSWNW
Trigger: CCAGTTCCAGCTCCTTTTTCACCAATGCCAATAGCT...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGCGTTTCCCACAGTATaGCCAGGTACACATAAATGG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDAFPTV*PGTHKW
Trigger: CCATTTATGTGTACCTGGTCATACTGTGGGAAACGC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTATTCTGGTGGGTCTTaGTATGTTTTGACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGYSGGS*YVLTGG
Trigger: ACCACCTGTCAAAACATATCAAGACCCACCAGAATA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCCTTGTATCCCTCTCCTaGTTCTTCTCAACACCATGC +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGALVSLS*FFSTPC
Trigger: GCATGGTGTTGAGAAGAATCAGGAGAGGGATACAAG...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCACTTGTATCCCTCTCCTaGTTCTTCTCAACACCATGC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPLVSLS*FFSTPC
Trigger: GCATGGTGTTGAGAAGAATCAGGAGAGGGATACAAG...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTGGATCAGTCTCTTCTaGAATCAGGTCACAGAGAAA +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGWISLF*NQVTEK
Trigger: TTTCTCTGTGACCTGATTTCAGAAGAGACTGATCCA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTTTATGGCTGGGCCTTaGGGACAATTCTGGTTGCAT +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDFMAGP*GQFWLH
Trigger: ATGCAACCAGAATTGTCCTCAAGGCCCAGCCATAAA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATTTATGGCTGGGCCTTaGGGACAATTCTGGTTGCAT +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPFMAGP*GQFWLH
Trigger: ATGCAACCAGAATTGTCCTCAAGGCCCAGCCATAAA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATACTGTACATTCCAGTaGGTTATCCTGCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPYCTFQ*VILPLS
Trigger: GGAAAGGGGCAGGATAACTCACTGGAATGTACAGTA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCACCAAAACTCTTGATCTaGTCCCAAGGTCCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPPKLLI*SQGPKG
Trigger: GCCTTTTGGACCTTGGGATCAGATCAAGAGTTTTGG...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTCATTGCCCCCATTATTaGCACCAACTCCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGHCPHY*HQLLFQ
Trigger: TTGAAAAAGGAGTTGGTGGCAATAATGGGGGCAATG...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTCAGTGCTGCTGCTACTaGCTGTGCTGCTACTTCGAG +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFQCCCY*LCCYFE
Trigger: CTCGAAGTAGCAGCACAGGCAGTAGCAGCAGCACTG...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTTCTGCTGCAAGTTGCTaGCAGCAGAGCCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFSAASC*QQSQRG
Trigger: TCCCCTTTGGCTCTGCTGGCAGCAACTTGCAGCAGA...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGTGACTCAATTCTGCTaGAAGTTGCTGCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSVTQFC*KLLPAE
Trigger: CTCTGCTGGCAGCAACTTGCAGCAGAATTGAGTCAC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATGCTCTCCTTCTTTTTaGTGGCCTGCTTGCAATGAG +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPCSPSF*WPACNE
Trigger: CTCATTGCAAGCAGGCCAGCAAAAAGAAGGAGAGCA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTGTTGCTGCTGTGTCTaGTGGTTTTGCTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDCCCCV*WFCSPS
Trigger: AGAAGGAGAGCAAAACCAGCAGACACAGCAGCAACA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGTGTGTGTACGTTTGTaGCTCTGTAGCTCATCCGAA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDVCVRL*LCSSSE
Trigger: TTCGGATGAGCTACAGAGGCACAAACGTACACACAC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATCGCCAAGAAGGTGCCTaGGTCAGTAGTATTTTGAAC +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDRQEGA*VSSILN
Trigger: GTTCAAAATACTACTGACGCAGGCACCTTCTTGGCG...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCTTGCCACTAGCACATaGTTTGGAGGAGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSLATST*FGGVLQ
Trigger: CTGCAGAACTCCTCCAAAGCATGTGCTAGTGGCAAG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGTAGCACCCACAGAGTaGCAGTTGGAAATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSVAPTE*QLEIPE
Trigger: TTCAGGGATTTCCAACTGGCACTCTGTGGGTGCTAC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACCTGTCAGAACTTGCTaGTTCTGTAAGTTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQPVRTC*FCKLGA
Trigger: CGCTCCCAACTTACAGAACCAGCAAGTTCTGACAGG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGGGCCACTGGTACATTaGTCACATACTGAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSGPLVH*SHTESV
Trigger: GACAGACTCAGTATGTGACCAATGTACCAGTGGCCC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGAGCCTCCAGATGTCTaGTTTTGCTGGATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPEPPDV*FCWMFR
Trigger: TCTGAACATCCAGCAAAACCAGACATCTGGAGGCTC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCTCTCCTTCTTTTTGCTaGCCTGCTTGCAATGAGCCT +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGASPSFC*PACNEP
Trigger: AGGCTCATTGCAAGCAGGCCAGCAAAAAGAAGGAGA...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTTCTGGAGGCCTGGCATaGAGGAGAGTTGAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFSGGLA*RRVEQH
Trigger: ATGCTGCTCAACTCTCCTCCATGCCAGGCCTCCAGA...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCCAGGTACACATAAATaGCCTCTCGCCTGTATGCCA +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSPGTHK*PLACMP
Trigger: TGGCATACAGGCGAGAGGCCATTTATGTGTACCTGG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTACGGGCAATGCCCTCTaGACAGATGGCCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTTGNAL*TDGLHG
Trigger: GCCATGGAGGCCATCTGTCCAGAGGGCATTGCCCGT...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATATTTTGGTCACAGAATaGTCTTCCTCCTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDILVTE*SSSSQP
Trigger: TGGCTGGGAGGAGGAAGACCATTCTGTGACCAAAAT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTCTGAAACAGATTCACTaGCTGATGCTCCTTATTGAC +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGLKQIH*LMLLID
Trigger: GTCAATAAGGAGCATCAGCCAGTGAATCTGTTTCAG...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGGCCAAACAAGATACTaGATCTGGAGCTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPGQTRY*IWSFLG
Trigger: ACCAAGGAAGCTCCAGATCCAGTATCTTGTTTGGCC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGTGGCTCACTACTGCTaGGAGACAAAAGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSVAHYC*ETKEAA
Trigger: AGCAGCTTCTTTTGTCTCCCAGCAGTAGTGAGCCAC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCACTCTTAGAAGAGGTCTaGTATCTGTGGAGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPLLEEV*YLWSRA
Trigger: GGCTCTACTCCACAGATACCAGACCTCTTCTAAGAG...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGGTCAACCTCAAAGCTaGTCTGCTCATCCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMGQPQS*SAHPLR
Trigger: TCTAAGAGGATGAGCAGACCAGCTTTGAGGTTGACC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGGTCAACCTCAAAGCTaGTCTGCTCATCCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDGQPQS*SAHPLR
Trigger: TCTAAGAGGATGAGCAGACCAGCTTTGAGGTTGACC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCTGCTTAATGTCTTCCTaGGGGCTGGTGTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGACLMSS*GLVFWE
Trigger: TTCCCAAAACACCAGCCCCCAGGAAGACATTAAGCA...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTGCTTAATGTCTTCCTaGGGGCTGGTGTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDCLMSS*GLVFWE
Trigger: TTCCCAAAACACCAGCCCCCAGGAAGACATTAAGCA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATAAGGCAACAGTGGTGTaGACTGGTTATTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDKATVV*TGYCQC
Trigger: ACACTGGCAATAACCAGTCCACACCACTGTTGCCTT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGGTATGATCTGTATTTaGCCAGAACCATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSGMICI*PEPSCC
Trigger: GCAGCAGGATGGTTCTGGTCAAATACAGATCATACC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATACATTGGTCACATACTaGGTCTGTCCTGAGAGTACA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDTLVTY*VCPEST
Trigger: TGTACTCTCAGGACAGACTCAGTATGTGACCAATGT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGGTGGTAGTAGTAGTTaGGTAGCTATTGGCATTGGT +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMGGSSS*VAIGIG
Trigger: ACCAATGCCAATAGCTACTCAACTACTACTACCACC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTGCATTGGGGCTAAGGTaGTTGTTTGGGCTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFALGLR*LFGLVG
Trigger: ACCCACAAGCCCAAACAATCACCTTAGCCCCAATGC...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTGTGCACCTGGATTCCTaGAGTACCCAATGCACTGAG +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFVHLDS*STQCTE
Trigger: CTCAGTGCATTGGGTACTTCAGGAATCCAGGTGCAC...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGGTCTTGATATGTTTTaGCAGGTGGTCACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDGLDMF*QVVTPH
Trigger: ATGAGGAGTGACCACCTGTCAAAACATATCAAGACC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCCCAGCCAACCCCTGTaGATGCATCTCTATATATCT +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSPSQPL*MHLYIS
Trigger: AGATATATAGAGATGCATTCACAGGGGTTGGCTGGG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGCGTCAGTAGTATTTTaGACACTCCCTCCACAGTTA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDASVVF*TLPPQL
Trigger: TAACTGTGGAGGGAGTGTTCAAAATACTACTGACGC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATCTGTAATAAGCTCCTaGCTCAAGGAATGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPSVISS*LKECRL
Trigger: GAGCCTACATTCCTTGAGTCAGGAGCTTATTACAGA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGGCAACCTGAAAACCTaGAAGGATGAGGGAATAAGT +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDGNLKT*KDEGIS
Trigger: ACTTATTCCCTCATCCTTTCAGGTTTTCAGGTTGCC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCCAAAACTCTTGATCTaGTCCCAAGGTCCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSPKLLI*SQGPKG
Trigger: GCCTTTTGGACCTTGGGATCAGATCAAGAGTTTTGG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGATCTCCAAAACTCTTaGTCTGATCCCAAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMDLQNS*SDPKVQ
Trigger: TTGGACCTTGGGATCAGATCAAGAGTTTTGGAGATC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTATTTCCTTGGTACCTaGTCTCCAAAACTCTTGATC +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGYFLGT*SPKLLI
Trigger: GATCAAGAGTTTTGGAGATCAGGTACCAAGGAAATA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATAGTCCTGTCAGAACTTaGTGGTTCTGTAAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDSPVRT*WFCKLG
Trigger: TCCCAACTTACAGAACCAGCAAGTTCTGACAGGACT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAATCCTTCCTCTCCACCTaGTGTGTCATCATGTATTCC +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQSFLST*CVIMYS
Trigger: GGAATACATGATGACACAGCAGGTGGAGAGGAAGGA...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGTGTGTGTACGTTTGTaGCTCTGTAGCTCATCCGAA +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSVCVRL*LCSSSE
Trigger: TTCGGATGAGCTACAGAGGCACAAACGTACACACAC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAAATGGACTGCAGATCTaGCACCTGCATGACGTTGAT +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQNGLQI*HLHDVD
Trigger: ATCAACGTCATGCAGGTGGCAGATCTGCAGTCCATT...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCCTGATATTAATGGACTaGAGATCTGCCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGALILMD*RSATCM
Trigger: CATGCAGGTGGCAGATCTGCAGTCCATTAATATCAG...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACGCCAAGAAGGTGCCTaGGTCAGTAGTATTTTGAAC +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQRQEGA*VSSILN
Trigger: GTTCAAAATACTACTGACGCAGGCACCTTCTTGGCG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTCCAGTGAGTTATCCTaGCCCTTTCCTCCAAAAGAT +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDSSELS*PFPPKD
Trigger: ATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTCTTCTGGGCATCCCCTaGCCTGCAAGTTTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFLLGIP*PASFGH
Trigger: ATGACCAAAACTTGCAGGGCAGGGGATGCCCAGAAG...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATTTCCCCAAAGCTACTaGTGCGACCTTTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPFPQSY*CDLSFI
Trigger: GATGAAAGAAAGGTCGCAGCAGTAGCTTTGGGGAAA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGAGACTGTGCGATTCTTaGAAGACTCACTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSRLCDS*KTHCHC
Trigger: GCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTTCTGGCCTTGAGAGTTaGTCCCTGATGATCCACTGG +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFSGLES*SLMIHW
Trigger: CCAGTGGATCATCAGGGACCAACTCTCAAGGCCAGA...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGAGCCTCCAGATGTCTaGTTTTGCTGGATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQEPPDV*FCWMFR
Trigger: TCTGAACATCCAGCAAAACCAGACATCTGGAGGCTC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGATTGTTTGGGCTTGTaGGTTCTGAACTTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMDCLGL*VLNLEV
Trigger: AACCTCCAAGTTCAGAACCCACAAGCCCAAACAATC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAAGCTCCATGATCACCTaGGGCATTTGCTATAGCCAA +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQSSMIT*GICYSQ
Trigger: TTGGCTATAGCAAATGCCCCAGGTGATCATGGAGCT...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCGACCGGCTTGGGGTTaGGCATCTGGGCTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTRPAWG*ASGLFS
Trigger: AGAAAACAGCCCAGATGCCCAACCCCAAGCCGGTCG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCTCTTCCATGTCTCTTaGACCCATGCTACCTTGCAT +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSLFHVS*THATLH
Trigger: ATGCAAGGTAGCATGGGTCCAAGAGACATGGAAGAG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTATGAACGCTTAAGCTaGTGGGAAGCCAAGACAACA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDYERLS*WEAKTT
Trigger: TGTTGTCTTGGCTTCCCACCAGCTTAAGCGTTCATA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCACTTCAAGCATCAGCCTaGGCTTCAAGGATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPLQASA*ASRIFP
Trigger: TGGAAAAATCCTTGAAGCCCAGGCTGATGCTTGAAG...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGACAAGATACTGGATCTaGAGCTTCCTTGGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMTRYWI*SFLGVK
Trigger: CTTCACACCAAGGAAGCTCCAGATCCAGTATCTTGT...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTGTGGAAGAGACTGAGTaGCTCACTACTGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFVEETE*LTTAGR
Trigger: TCTCCCAGCAGTAGTGAGCCACTCAGTCTCTTCCAC...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATAATGTTTTCCGGGGTTaGAGAAGTGCCATATCTTCC +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDNVFRG*RSAISS
Trigger: GGAAGATATGGCACTTCTCCAACCCCGGAAAACATT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAAATGTTTTCCGGGGTTaGAGAAGTGCCATATCTTCC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPNVFRG*RSAISS
Trigger: GGAAGATATGGCACTTCTCCAACCCCGGAAAACATT...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATCTGTCATTTCATCCATaGAGTGATCTTGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDLSFHP*SDLGQR
Trigger: CCTCTGACCAAGATCACTCCATGGATGAAATGACAG...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426431.2
3UTR CAA 72 bp AACTCAGAAGCCCACACATCAAAACTTAGAGCTACCTaGGAAGACAGCAGTACCAAAGTCCAAATACTCCAC +
Preference number: 4 (lower is better)
Translates to: NSEAHTSKLRAT*EDSSTKVQILH
Trigger: GTGGAGTATTTGGACTTTGGTACTGCTGTCTTCCAAGGTAGCTCTAAGTTTTGATGTGTGGGCTTCTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATATACTGAGTCTGTCCTaGGAGTACATTATTAGCCAG +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDILSLS*EYIISQ
Trigger: CTGGCTAATAATGTACTCTCAGGACAGACTCAGTAT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGACATTGGTCACATACTaGGTCTGTCCTGAGAGTACA +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSTLVTY*VCPEST
Trigger: TGTACTCTCAGGACAGACTCAGTATGTGACCAATGT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCTGATCGTGACTGCCTaGGAGCTGGGAGTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTLIVTA*ELGVKV
Trigger: TACCTTGACTCCCAGCTCTCAGGCAGTCACGATCAG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTTGGGGTGTCTGGCCTTaGGAGTTGGTCCCTGATGAT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTWGVWP*ELVPDD
Trigger: ATCATCAGGGACCAACTCTCAAGGCCAGACACCCCA...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCTGGCCTGCTTGCAATaGGCCTCCAGATGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTLACLQ*ASRCLV
Trigger: AACCAGACATCTGGAGGCTCATTGCAAGCAGGCCAG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTAAGTGTGCCCGCAGGTaGGAGGTCTTGCCATACACT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTKCARR*EVLPYT
Trigger: AGTGTATGGCAAGACCTCTCACCTGCGGGCACACTT...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGGTCTTGATATGTTTTaGCAGGTGGTCACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQGLDMF*QVVTPH
Trigger: ATGAGGAGTGACCACCTGTCAAAACATATCAAGACC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTATTCTGGTGGGTCTTaGTATGTTTTGACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDYSGGS*YVLTGG
Trigger: ACCACCTGTCAAAACATATCAAGACCCACCAGAATA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAATCTACAGAAAAGCTTaGTGTGTCACAACAAGGCTC +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPIYRKA*CVTTRL
Trigger: GAGCCTTGTTGTGACACATCAAGCTTTTCTGTAGAT...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCACAGAGAAAACAGGATaGTTTCTCCCAATCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGATEKTG*FLPISP
Trigger: AGGAGAGATTGGGAGAAATCATCCTGTTTTCTCTGT...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGACAGAGAAAACAGGATaGTTTCTCCCAATCTCTCCT +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMTEKTG*FLPISP
Trigger: AGGAGAGATTGGGAGAAATCATCCTGTTTTCTCTGT...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTGGATCAGTCTCTTCTaGAATCAGGTCACAGAGAAA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDWISLF*NQVTEK
Trigger: TTTCTCTGTGACCTGATTTCAGAAGAGACTGATCCA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTAGGATCAATTTATTCTaGACCAGGCTGAGAAATATC +
Preference number: 4 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGRINLF*TRLRNI
Trigger: GATATTTCTCAGCCTGGTTCAGAATAAATTGATCCT...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTCAGGGTACTTACACTaGAAACTTCAAGCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMSGYLH*KLQASS
Trigger: GCTACTTGCTTGAAGTTTTCAGTGTAAGTACCCTGA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGATCTCCAAAACTCTTaGTCTGATCCCAAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSDLQNS*SDPKVQ
Trigger: TTGGACCTTGGGATCAGATCAAGAGTTTTGGAGATC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTTGCTGCTACTGCCTGTaGTGCTACTTCGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTCCYCL*CYFEPV
Trigger: CACAGGCTCGAAGTAGCAGCACAGGCAGTAGCAGCA...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTTGGGTGACTCAATTCTaGTGCAAGTTGCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFWVTQF*CKLLPA
Trigger: TGCTGGCAGCAACTTGCAGCAGAATTGAGTCACCCA...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTTGCCATTGGTACTGCTaGCACTCTGTTCCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFCHWYC*HSVPLR
Trigger: CCTCAAAGGAACAGAGTGGCAGCAGTACCAATGGCA...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGCTGCTGATCGTGACTaGCTGAGAGCTGGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTAADRD*LRAGSQ
Trigger: TTGACTCCCAGCTCTCAGGCAGTCACGATCAGCAGC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCCAGATGTCTGGTTTTaGTGGATGTTCAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSPDVWF*WMFRAS
Trigger: TGATGCTCTGAACATCCAGCAAAACCAGACATCTGG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTTGCAGCTGTAGAGTCTaGCAACTGACCTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFCSCRV*QLTCPL
Trigger: CAATGGACAGGTCAGTTGGCAGACTCTACAGCTGCA...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTCCCAAGGAAACACCCTaGATTGGGGCTAAGGTGATT +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFPKETP*IGAKVI
Trigger: AATCACCTTAGCCCCAATGCAGGGTGTTTCCTTGGG...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACTGATATTAATGGACTaGAGATCTGCCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQLILMD*RSATCM
Trigger: CATGCAGGTGGCAGATCTGCAGTCCATTAATATCAG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTCTTGCCACTAGCACATaGTTTGGAGGAGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFLATST*FGGVLQ
Trigger: CTGCAGAACTCCTCCAAAGCATGTGCTAGTGGCAAG...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTGGTCGAGAGAGACAATaGTTTTATGGCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFGRERQ*FYGWAL
Trigger: CAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACC...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGTCCAGTGAGTTATCCTaGCCCTTTCCTCCAAAAGAT +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSSSELS*PFPPKD
Trigger: ATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGA...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGGAGACAAAAGAAGCTaGTTCTGTTTTGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDGDKRS*FCFEAK
Trigger: TTTGGCCTCAAAACAGAAGCAGCTTCTTTTGTCTCC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGTCCTAGCAAAGATCTaGAGCTTCCAGTATTCACAC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSVLAKI*SFQYSH
Trigger: GTGTGAATACTGGAAGCTGCAGATCTTTGCTAGGAC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACTGTCATTTCATCCATaGAGTGATCTTGGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQLSFHP*SDLGRS
Trigger: TGAGCGACCAAGATCACTCCATGGATGAAATGACAG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327443.9
CDS-3UTR CCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTTGGTGTTGCTGCTGCTaGTCTGCCCCAAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTWCCCC*SAPRKH
Trigger: GTGTTTCCTTGGGGCAGACCAGCAGCAGCAACACCA...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGACTTTCCCACAGCCTTaGATGTGGCAAATATGCTGT +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSTFPQP*MWQICC
Trigger: ACAGCATATTTGCCACATCCAAGGCTGTGGGAAAGT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCAACTTAGAGCTACCTTaGAAGACAGCAGTACCAAAG +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGANLELP*KTAVPK
Trigger: CTTTGGTACTGCTGTCTTCCAAGGTAGCTCTAAGTT...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGAGACAATGCTTTTATaGCTGGGCCTTGAGGACAAT +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQETMLL*LGLEDN
Trigger: ATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAACAAGATACTGGATCTaGAGCTTCCTTGGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQTRYWI*SFLGVK
Trigger: CTTCACACCAAGGAAGCTCCAGATCCAGTATCTTGT...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTGGAGAAAATCTTTCTaGGTTTGGGGAAGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMWRKSF*VWGSQS
Trigger: ACTCTGACTTCCCCAAACCCAGAAAGATTTTCTCCA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCTGGAGAAAATCTTTCTaGGTTTGGGGAAGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAWRKSF*VWGSQS
Trigger: ACTCTGACTTCCCCAAACCCAGAAAGATTTTCTCCA...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATAACAGTGGTGTGGACTaGTTATTGCCAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDNSGVD*LLPVLR
Trigger: TCTTAACACTGGCAATAACCAGTCCACACCACTGTT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGCTACTTCGAGCCTGTaGAAAGGCACCACCACCATT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTATSSL*KGTTTI
Trigger: AATGGTGGTGGTGCCTTTTCACAGGCTCGAAGTAGC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTTCCTGGGAGATGGCTTaGGTTGTAAAGGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTSWEMA*VVKVCP
Trigger: AGGGCAGACCTTTACAACTCAAGCCATCTCCCAGGA...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTAGGAATGGAAGCAGCTaGGGCAATGGGTGTGAGAGT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTRNGSS*GNGCES
Trigger: ACTCTCACACCCATTGCCTCAGCTGCTTCCATTCCT...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGATCTACAGAAAAGCTTaGTGTGTCACAACAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSIYRKA*CVTTRL
Trigger: GAGCCTTGTTGTGACACATCAAGCTTTTCTGTAGAT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAAAGACTTCTAATTCTTaGTGCTCAGAGCAGCTAATG +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPKTSNS*CSEQLM
Trigger: CATTAGCTGCTCTGAGCATCAAGAATTAGAAGTCTT...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGAACAGATTCACTGGCTaGTGCTCCTTATTGACAATG +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSNRFTG*CSLLTM
Trigger: CATTGTCAATAAGGAGCATCAGCCAGTGAATCTGTT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCAGCGTTAATAGAATTTaGTCTGGGGAAAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGASVNRI*SGESSL
Trigger: CAAGGAACTTTCCCCAGATCAAATTCTATTAACGCT...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTAGCATAACAGGGGCCTaGTTAGCACCCCAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTSITGA*LAPQKN
Trigger: GTTCTTCTGGGGTGCTAATCAGGCCCCTGTTATGCT...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTATTTCCTTGGTACCTaGTCTCCAAAACTCTTGATC +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDYFLGT*SPKLLI
Trigger: GATCAAGAGTTTTGGAGATCAGGTACCAAGGAAATA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGAGGAAGAGATGATCTaGCAGCCATTGGCACCCTGT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTEEEMI*QPLAPC
Trigger: ACAGGGTGCCAATGGCTGGCAGATCATCTCTTCCTC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTGGATAAGAATTTGTTaGTGCTGTGTCTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDWIRIC*CCVCWF
Trigger: AAACCAGCAGACACAGCAGCAACAAATTCTTATCCA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCTGGATGTGGCAAATATaGTGTTTCTTTTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAWMWQI*CFFLPG
Trigger: TCCTGGCAAAAAGAAACAGCATATTTGCCACATCCA...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTAATGGACTGCAGATCTaGCACCTGCATGACGTTGAT +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFNGLQI*HLHDVD
Trigger: ATCAACGTCATGCAGGTGGCAGATCTGCAGTCCATT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGACAGGTTCTGAGTTCTaGCTTTCAGTGAGAATAAAG +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMTGSEF*LSVRIK
Trigger: CTTTATTCTCACTGAAAGGCAGAACTCAGAACCTGT...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGGAGACAAAAGAAGCTaGTTCTGTTTTGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQGDKRS*FCFEAK
Trigger: TTTGGCCTCAAAACAGAAGCAGCTTCTTTTGTCTCC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTAGACTGTGCGATTCTTaGAAGACTCACTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFRLCDS*KTHCHC
Trigger: GCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATAACGGTCTGGAACTGTaGGATTACTTGATACTGAAT +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDNGLEL*DYLILN
Trigger: ATTCAGTATCAAGTAATCCCACAGTTCCAGACCGTT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCAACGGTCTGGAACTGTaGGATTACTTGATACTGAAT +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGANGLEL*DYLILN
Trigger: ATTCAGTATCAAGTAATCCCACAGTTCCAGACCGTT...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCCACAGCCTTGGATGTaGCAAATATGCTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSPQPWM*QICCFF
Trigger: AAAGAAACAGCATATTTGCCACATCCAAGGCTGTGG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACCACAGCCTTGGATGTaGCAAATATGCTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQPQPWM*QICCFF
Trigger: AAAGAAACAGCATATTTGCCACATCCAAGGCTGTGG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGCCTCCCTTCTTATTCTaGTGGGTCTTGATATGTTTT +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMPPFLF*WVLICF
Trigger: AAAACATATCAAGACCCACCAGAATAAGAAGGGAGG...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTCTCTTCCATGTCTCTTaGACCCATGCTACCTTGCAT +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFLFHVS*THATLH
Trigger: ATGCAAGGTAGCATGGGTCCAAGAGACATGGAAGAG...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAATGACCAAGGTATTTTaGTCACAGAATGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPMTKVF*SQNGLP
Trigger: AGGAAGACCATTCTGTGACCAAAATACCTTGGTCAT...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTGAACGCTTAAGCTGGTaGGAAGCCAAGACAACATCT +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFERLSW*EAKTTS
Trigger: AGATGTTGTCTTGGCTTCCCACCAGCTTAAGCGTTC...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTAAGGCAACAGTGGTGTaGACTGGTTATTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFKATVV*TGYCQC
Trigger: ACACTGGCAATAACCAGTCCACACCACTGTTGCCTT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTGGTTTGCACCTGGTATaGTCTGTATTTGACCAGAAC +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFGLHLV*SVFDQN
Trigger: GTTCTGGTCAAATACAGATCATACCAGGTGCAAACC...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTCATGAAGTGATCAGATaGGAGAAGATGAGACGGCAA +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFHEVIR*EKMRRQ
Trigger: TTGCCGTCTCATCTTCTCTCATCTGATCACTTCATG...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTAAGCTGCTTCTGTTTTaGGGCCAAACAAGATACTGG +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFKLLLF*GQTRYW
Trigger: CCAGTATCTTGTTTGGCCTCAAAACAGAAGCAGCTT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTTCTGTAATAAGCTCCTaGCTCAAGGAATGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFSVISS*LKECRL
Trigger: GAGCCTACATTCCTTGAGTCAGGAGCTTATTACAGA...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATAGGATCAATTTATTCTaGACCAGGCTGAGAAATATC +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDRINLF*TRLRNI
Trigger: GATATTTCTCAGCCTGGTTCAGAATAAATTGATCCT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGTGACTCAATTCTGCTaGAAGTTGCTGCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTVTQFC*KLLPAE
Trigger: CTCTGCTGGCAGCAACTTGCAGCAGAATTGAGTCAC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGATAATCTGTTGGTTTaGACCTGGTATGATCTGTAT +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMDNLLV*TWYDLY
Trigger: ATACAGATCATACCAGGTGCAAACCAACAGATTATC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAATGGATAAGAATTTGTTaGTGCTGTGTCTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQWIRIC*CCVCWF
Trigger: AAACCAGCAGACACAGCAGCAACAAATTCTTATCCA...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAATGGATGTGGCAAATATaGTGTTTCTTTTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQWMWQI*CFFLPG
Trigger: TCCTGGCAAAAAGAAACAGCATATTTGCCACATCCA...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTTCTTCTCAACACCATaGATTTTAATGCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDFFSTP*ILMLHG
Trigger: GCCATGAAGCATTAAAATGCATGGTGTTGAGAAGAA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGCCAACCCCTGTGAATaGATCTCTATATATCTTTAT +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMANPCE*ISIYLY
Trigger: ATAAAGATATATAGAGATGCATTCACAGGGGTTGGC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGGGCATCCCCTGCCCTaGAAGTTTTGGTCATCTAAA +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTGHPLP*KFWSSK
Trigger: TTTAGATGACCAAAACTTGCAGGGCAGGGGATGCCC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCTTTGTGATAATCTGTTaGTTTGCACCTGGTATGATC +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAFVIIC*FAPGMI
Trigger: GATCATACCAGGTGCAAACCAACAGATTATCACAAA...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACCTCCCTTCTTATTCTaGTGGGTCTTGATATGTTTT +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQPPFLF*WVLICF
Trigger: AAAACATATCAAGACCCACCAGAATAAGAAGGGAGG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGATGACCAAGGTATTTTaGTCACAGAATGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSMTKVF*SQNGLP
Trigger: AGGAAGACCATTCTGTGACCAAAATACCTTGGTCAT...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTTATGAACGCTTAAGCTaGTGGGAAGCCAAGACAACA +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFYERLS*WEAKTT
Trigger: TGTTGTCTTGGCTTCCCACCAGCTTAAGCGTTCATA...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCGATTTCTTTTTGTTCTaGGCTATCATTCCCATGATC +
Preference number: 4 (lower is better)
Translates to: FSLMFPTFKEALMIQMGADFFLF*AIIPMI
Trigger: GATCATGGGAATGATAGCCCAGAACAAAAAGAAATC...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTCAATGCTTTTATGGCTaGGCCTTGAGGACAATTCTG +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFQCFYG*ALRTIL
Trigger: CAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTG...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTGAGACAATGCTTTTATaGCTGGGCCTTGAGGACAAT +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFETMLL*LGLEDN
Trigger: ATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTC...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTTGTACATAAGTTACTaGCTCTCTTCTAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDLYISY*LSSKGD
Trigger: ATCTCCCTTAGAAGAGAGCCAGTAACTTATGTACAA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTTGTACATAAGTTACTaGCTCTCTTCTAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMLYISY*LSSKGD
Trigger: ATCTCCCTTAGAAGAGAGCCAGTAACTTATGTACAA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGCTGTTCTCATTGGGTaGCTCAATTCTGCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTAVLIG*LNSAAS
Trigger: ACTTGCAGCAGAATTGAGTCACCCAATGAGAACAGC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTATACTGAGTCTGTCCTaGGAGTACATTATTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFILSLS*EYIISQ
Trigger: CTGGCTAATAATGTACTCTCAGGACAGACTCAGTAT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGCGTTTCCCACAGTATaGCCAGGTACACATAAATGG +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTAFPTV*PGTHKW
Trigger: CCATTTATGTGTACCTGGTCATACTGTGGGAAACGC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTAGGAGTGCAAGAAGCTaGTCCCAAACAAAAAGACAA +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFRSARS*SQTKRQ
Trigger: TTGTCTTTTTGTTTGGGATCAGCTTCTTGCACTCCT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTTGTTGCTGCTGTGTCTaGTGGTTTTGCTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTCCCCV*WFCSPS
Trigger: AGAAGGAGAGCAAAACCAGCAGACACAGCAGCAACA...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGTTCTTCTCAACACCATaGATTTTAATGCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSFFSTP*ILMLHG
Trigger: GCCATGAAGCATTAAAATGCATGGTGTTGAGAAGAA...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCCCCAAAGCTACTGCTaGGACCTTTCTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTPQSYC*DLSFIL
Trigger: AAGGATGAAAGAAAGGTCGCAGCAGTAGCTTTGGGG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTCTGTTGGTTTGCACCTaGTATGATCTGTATTTGACC +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFLLVCT*YDLYLT
Trigger: GGTCAAATACAGATCATACCAGGTGCAAACCAACAG...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGTTTGTGATAATCTGTTaGTTTGCACCTGGTATGATC +
Preference number: 4 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSFVIIC*FAPGMI
Trigger: GATCATACCAGGTGCAAACCAACAGATTATCACAAA...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGATTTCTTTTTGTTCTaGGCTATCATTCCCATGATC +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQDFFLF*AIIPMI
Trigger: GATCATGGGAATGATAGCCCAGAACAAAAAGAAATC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGGCCAAACAAGATACTaGATCTGGAGCTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTGQTRY*IWSFLG
Trigger: ACCAAGGAAGCTCCAGATCCAGTATCTTGTTTGGCC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCTCTTAGAAGAGGTCTaGTATCTGTGGAGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTLLEEV*YLWSRA
Trigger: GGCTCTACTCCACAGATACCAGACCTCTTCTAAGAG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGGTGGTAGTAGTAGTTaGGTAGCTATTGGCATTGGT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTGGSSS*VAIGIG
Trigger: ACCAATGCCAATAGCTACTCAACTACTACTACCACC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGCGTCAGTAGTATTTTaGACACTCCCTCCACAGTTA +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTASVVF*TLPPQL
Trigger: TAACTGTGGAGGGAGTGTTCAAAATACTACTGACGC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTAGTCCTGTCAGAACTTaGTGGTTCTGTAAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTSPVRT*WFCKLG
Trigger: TCCCAACTTACAGAACCAGCAAGTTCTGACAGGACT...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCCAGATGTCTGGTTTTaGTGGATGTTCAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTPDVWF*WMFRAS
Trigger: TGATGCTCTGAACATCCAGCAAAACCAGACATCTGG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAACATACAAAAACACTTaGTTTCTATCAGATCAGGGT +
Preference number: 4 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQTYKNT*FLSDQG
Trigger: ACCCTGATCTGATAGAAAGCAAGTGTTTTTGTATGT...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGTCCTAGCAAAGATCTaGAGCTTCCAGTATTCACAC +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTVLAKI*SFQYSH
Trigger: GTGTGAATACTGGAAGCTGCAGATCTTTGCTAGGAC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTTGTTGCTGTTCTCATTaGGTGACTCAATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTCCCSH*VTQFCC
Trigger: GCAGCAGAATTGAGTCACCCAATGAGAACAGCAACA...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGATTGTTTGGGCTTGTaGGTTCTGAACTTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTDCLGL*VLNLEV
Trigger: AACCTCCAAGTTCAGAACCCACAAGCCCAAACAATC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCAATGCTTTTATGGCTaGGCCTTGAGGACAATTCTG +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTQCFYG*ALRTIL
Trigger: CAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTAGGAGTGCAAGAAGCTaGTCCCAAACAAAAAGACAA +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTRSARS*SQTKRQ
Trigger: TTGTCTTTTTGTTTGGGATCAGCTTCTTGCACTCCT...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTAACAGATTCACTGGCTaGTGCTCCTTATTGACAATG +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTNRFTG*CSLLTM
Trigger: CATTGTCAATAAGGAGCATCAGCCAGTGAATCTGTT...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTTCAGGGTACTTACACTaGAAACTTCAAGCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTSGYLH*KLQASS
Trigger: GCTACTTGCTTGAAGTTTTCAGTGTAAGTACCCTGA...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTTACTCCTCTTTCAAATaGACACTGTGGAGAAAATCT +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFYSSFK*TLWRKS
Trigger: AGATTTTCTCCACAGTGTTCATTTGAAAGAGGAGTA...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCTGTTGGTTTGCACCTaGTATGATCTGTATTTGACC +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTLLVCT*YDLYLT
Trigger: GGTCAAATACAGATCATACCAGGTGCAAACCAACAG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCTGAAACAGATTCACTaGCTGATGCTCCTTATTGAC +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTLKQIH*LMLLID
Trigger: GTCAATAAGGAGCATCAGCCAGTGAATCTGTTTCAG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTAACAGTGGTGTGGACTaGTTATTGCCAGTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTNSGVD*LLPVLR
Trigger: TCTTAACACTGGCAATAACCAGTCCACACCACTGTT...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR TCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTAGCGTTAATAGAATTTaGTCTGGGGAAAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTSVNRI*SGESSL
Trigger: CAAGGAACTTTCCCCAGATCAAATTCTATTAACGCT...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTACATACAAAAACACTTaGTTTCTATCAGATCAGGGT +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFTYKNT*FLSDQG
Trigger: ACCCTGATCTGATAGAAAGCAAGTGTTTTTGTATGT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTACAGGTTCTGAGTTCTaGCTTTCAGTGAGAATAAAG +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTTGSEF*LSVRIK
Trigger: CTTTATTCTCACTGAAAGGCAGAACTCAGAACCTGT...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTAAATATCCATTAAATTaGATTCTGTGTAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFKYPLN*ILCSTH
Trigger: GTGGGTGCTACACAGAATGCAATTTAATGGATATTT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGATAATCTGTTGGTTTaGACCTGGTATGATCTGTAT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTDNLLV*TWYDLY
Trigger: ATACAGATCATACCAGGTGCAAACCAACAGATTATC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGCCAACCCCTGTGAATaGATCTCTATATATCTTTAT +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTANPCE*ISIYLY
Trigger: ATAAAGATATATAGAGATGCATTCACAGGGGTTGGC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
3UTR CAA 72 bp CAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTaGTACAATTCCACTGAAAGACTTCTAATTCTTGAT +
Preference number: 4 (lower is better)
Translates to: QTEPRLLSSKGL*YNSTERLLILD
Trigger: ATCAAGAATTAGAAGTCTTTCAGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR GCA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTAAATATCCATTAAATTaGATTCTGTGTAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTKYPLN*ILCSTH
Trigger: GTGGGTGCTACACAGAATGCAATTTAATGGATATTT...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS GCA 90 bp GCAGAGCCAAAGGGGATGGCTGGGACTCCTGCCCTCCTCCTCCAGTaGTGCTGCTACTGCCTGTGCTGCTACTTCGAGCCTGTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: AEPKGMAGTPALLLQ*CCYCLCCYFEPVKR
Trigger: CCTTTTCACAGGCTCGAAGTAGCAGCACAGGCAGTAGCAGCAGCACTGGAGGAGGAGGGCAGGAGTCCCAGCCATCCCCTTTGGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS GCA 90 bp GCCAGCCATTGGCACCCTGCCCTCCTCCTCCAGTGCTGCTGCTACTaGCTGTGCTGCTACTTCGAGCCTGTGAAAAGGCACCACCACCAT +
Preference number: 5 (lower is better)
Translates to: ASHWHPALLLQCCCY*LCCYFEPVKRHHHH
Trigger: ATGGTGGTGGTGCCTTTTCACAGGCTCGAAGTAGCAGCACAGGCAGTAGCAGCAGCACTGGAGGAGGAGGGCAGGGTGCCAATGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551969.5
CDS TCA 90 bp TGTGAGCCACTCTCCTGGGACCCAGAGCTGCTGATCGTGACTGCCTaGGAGCTGGGAGTCAAGGTAGCTGCAGAAACGCTGTTGACAGGT +
Preference number: 5 (lower is better)
Translates to: CEPLSWDPELLIVTA*ELGVKVAAETLLTG
Trigger: ACCTGTCAACAGCGTTTCTGCAGCTACCTTGACTCCCAGCTCTCAGGCAGTCACGATCAGCAGCTCTGGGTCCCAGGAGAGTGGCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 90 bp TCCTCCAGTGCTGCTGCTACTGCCTGTGCTGCTACTTCGAGCCTGTaGAAAGGCACCACCACCATTACCATTGCCCCCATTATTGCCACC +
Preference number: 5 (lower is better)
Translates to: SSSAAATACAATSSL*KGTTTITIAPIIAT
Trigger: GGTGGCAATAATGGGGGCAATGGTAATGGTGGTGGTGCCTTTTCACAGGCTCGAAGTAGCAGCACAGGCAGTAGCAGCAGCACTGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS GCA 90 bp CAAGCTCACCTGTTCCCCCTGACTGACTCGGGCCCTGGGAGTTGTTaGTGTTCTCATTGGGTGACTCAATTCTGCTGCAAGTTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: QAHLFPLTDSGPGSC*CSHWVTQFCCKLLP
Trigger: TGGCAGCAACTTGCAGCAGAATTGAGTCACCCAATGAGAACAGCAACAACTCCCAGGGCCCGAGTCAGTCAGGGGGAACAGGTGAGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS CCA 90 bp TTCCCCCTGACTGACTCGGGCCCTGGGAGTTGTTGCTGTTCTCATTaGGTGACTCAATTCTGCTGCAAGTTGCTGCCAGCAGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: FPLTDSGPGSCCCSH*VTQFCCKLLPAEPK
Trigger: CTTTGGCTCTGCTGGCAGCAACTTGCAGCAGAATTGAGTCACCCAATGAGAACAGCAACAACTCCCAGGGCCCGAGTCAGTCAGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS CCA 90 bp GAGCGGCAGCCACAACATACTGCCCACCAGAGACTGTGCGATTCTTaGAAGACTCACTGCCATTGCTGCCATTGGTACTGCTGCCACTCT +
Preference number: 5 (lower is better)
Translates to: ERQPQHTAHQRLCDS*KTHCHCCHWYCCHS
Trigger: AGAGTGGCAGCAGTACCAATGGCAGCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTCTGGTGGGCAGTATGTTGTGGCTGCCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CCA 90 bp ATTGGGCCCCACTGTTGGTGTCCGGATGATGATGGGACCAGAGTTTaGAACAGCCTGAAGCTGGAGGTTCTGGAGGGTTTCCTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: IGPHCWCPDDDGTRV*NSLKLEVLEGFLGD
Trigger: ATCTCCCAGGAAACCCTCCAGAACCTCCAGCTTCAGGCTGTTCCAAACTCTGGTCCCATCATCATCCGGACACCAACAGTGGGGCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 90 bp CCCATTCAGGGCCACTGGTACATTGGTCACATACTGAGTCTGTCCTaGGAGTACATTATTAGCCAGGCCTTGGAGGGGGACAGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: PIQGHWYIGHILSLS*EYIISQALEGDSLL
Trigger: CAGCAGGCTGTCCCCCTCCAAGGCCTGGCTAATAATGTACTCTCAGGACAGACTCAGTATGTGACCAATGTACCAGTGGCCCTGAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS GCA 90 bp GTAAGTTGGGAGCGGCAGCCACAACATACTGCCCACCAGAGACTGTaGGATTCTTGGAAGACTCACTGCCATTGCTGCCATTGGTACTGC +
Preference number: 5 (lower is better)
Translates to: VSWERQPQHTAHQRL*DSWKTHCHCCHWYC
Trigger: GCAGTACCAATGGCAGCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTCTGGTGGGCAGTATGTTGTGGCTGCCGCTCCCAACTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CCA 90 bp GCATCACTCCAGGTAGTCCTGTCAGAACTTGCTGGTTCTGTAAGTTaGGAGCGGCAGCCACAACATACTGCCCACCAGAGACTGTGCGAT +
Preference number: 5 (lower is better)
Translates to: ASLQVVLSELAGSVS*ERQPQHTAHQRLCD
Trigger: ATCGCACAGTCTCTGGTGGGCAGTATGTTGTGGCTGCCGCTCCCAACTTACAGAACCAGCAAGTTCTGACAGGACTACCTGGAGTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CCA 90 bp CTGCATGACGTTGATGCCACTGTTGGCAAGACGGGCAATGCCCTCTaGACAGATGGCCTCCATGGCTACCATATTGGTGGTAATAAGGGC +
Preference number: 5 (lower is better)
Translates to: LHDVDATVGKTGNAL*TDGLHGYHIGGNKG
Trigger: GCCCTTATTACCACCAATATGGTAGCCATGGAGGCCATCTGTCCAGAGGGCATTGCCCGTCTTGCCAACAGTGGCATCAACGTCATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGGTGTGAGAGTGGTGTaGCTGCTGCTGGTCTGCCCC +
Preference number: 5 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGGVRVV*LLLVCP
Trigger: GGGGCAGACCAGCAGCAGCAACACCACTCTCACACC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGGTCCTCCGACCGGCTaGGGGTTGGGCATCTGGGCT +
Preference number: 5 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDGPPTG*GLGIWA
Trigger: AGCCCAGATGCCCAACCCCAAGCCGGTCGGAGGACC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 90 bp TGCTATAGCCAACGGCAGGCCTTGAATTGGGTGCACCTGGATTCCTaGAGTACCCAATGCACTGAGGTTAATGGTCTGGAGGCCTGGCAT +
Preference number: 5 (lower is better)
Translates to: CYSQRQALNWVHLDS*STQCTEVNGLEAWH
Trigger: ATGCCAGGCCTCCAGACCATTAACCTCAGTGCATTGGGTACTTCAGGAATCCAGGTGCACCCAATTCAAGGCCTGCCGTTGGCTATAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CCA 90 bp CCTGAGAGTACATTATTAGCCAGGCCTTGGAGGGGGACAGCCTGCTaGAGTAGGTTTGGCATAGCAGCAATGATGTTGCCTCCACTTCCT +
Preference number: 5 (lower is better)
Translates to: PESTLLARPWRGTAC*SRFGIAAMMLPPLP
Trigger: AGGAAGTGGAGGCAACATCATTGCTGCTATGCCAAACCTACTCCAGCAGGCTGTCCCCCTCCAAGGCCTGGCTAATAATGTACTCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGGTCCTCCGACCGGCTaGGGGTTGGGCATCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQGPPTG*GLGIWA
Trigger: AGCCCAGATGCCCAACCCCAAGCCGGTCGGAGGACC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 90 bp GCATCAGACCCCTGTAGCCCACTGACCCTCTGGGGTGTCTGGCCTTaGGAGTTGGTCCCTGATGATCCACTGGTAGTAAAGTTCATAATT +
Preference number: 5 (lower is better)
Translates to: ASDPCSPLTLWGVWP*ELVPDDPLVVKFII
Trigger: AATTATGAACTTTACTACCAGTGGATCATCAGGGACCAACTCTCAAGGCCAGACACCCCAGAGGGTCAGTGGGCTACAGGGGTCTGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 90 bp ACACCCTGCATTGGGGCTAAGGTGATTGTTTGGGCTTGTGGGTTCTaGACTTGGAGGTTCTGCAGCTGTAGAGTCTGCCAACTGACCTGT +
Preference number: 5 (lower is better)
Translates to: TPCIGAKVIVWACGF*TWRFCSCRVCQLTC
Trigger: ACAGGTCAGTTGGCAGACTCTACAGCTGCAGAACCTCCAAGTTCAGAACCCACAAGCCCAAACAATCACCTTAGCCCCAATGCAGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS GCA 90 bp CAACATACTGCCCACCAGAGACTGTGCGATTCTTGGAAGACTCACTaGCATTGCTGCCATTGGTACTGCTGCCACTCTGTTCCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: QHTAHQRLCDSWKTH*HCCHWYCCHSVPLR
Trigger: CCTCAAAGGAACAGAGTGGCAGCAGTACCAATGGCAGCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTCTGGTGGGCAGTATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS GCA 90 bp AGAACTTGCTGGTTCTGTAAGTTGGGAGCGGCAGCCACAACATACTaGCCACCAGAGACTGTGCGATTCTTGGAAGACTCACTGCCATTG +
Preference number: 5 (lower is better)
Translates to: RTCWFCKLGAAATTY*PPETVRFLEDSLPL
Trigger: CAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTCTGGTGGGCAGTATGTTGTGGCTGCCGCTCCCAACTTACAGAACCAGCAAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS GCA 90 bp TGTCCTGAGAGTACATTATTAGCCAGGCCTTGGAGGGGGACAGCCTaGTGGAGTAGGTTTGGCATAGCAGCAATGATGTTGCCTCCACTT +
Preference number: 5 (lower is better)
Translates to: CPESTLLARPWRGTA*WSRFGIAAMMLPPL
Trigger: AAGTGGAGGCAACATCATTGCTGCTATGCCAAACCTACTCCAGCAGGCTGTCCCCCTCCAAGGCCTGGCTAATAATGTACTCTCAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS GCA 90 bp CAGAAGCCATTGCCACTGATATTAATGGACTGCAGATCTGCCACCTaGATGACGTTGATGCCACTGTTGGCAAGACGGGCAATGCCCTCT +
Preference number: 5 (lower is better)
Translates to: QKPLPLILMDCRSAT*MTLMPLLARRAMPS
Trigger: AGAGGGCATTGCCCGTCTTGCCAACAGTGGCATCAACGTCATGCAGGTGGCAGATCTGCAGTCCATTAATATCAGTGGCAATGGCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTACGTTGATGCCACTGTaGGCAAGACGGGCAATGCCC +
Preference number: 5 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGTLMPL*ARRAMP
Trigger: GGGCATTGCCCGTCTTGCCAACAGTGGCATCAACGT...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 90 bp AAGGTGATGTTCCCATTCAGGGCCACTGGTACATTGGTCACATACTaGGTCTGTCCTGAGAGTACATTATTAGCCAGGCCTTGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: KVMFPFRATGTLVTY*VCPESTLLARPWRG
Trigger: CCCCCTCCAAGGCCTGGCTAATAATGTACTCTCAGGACAGACTCAGTATGTGACCAATGTACCAGTGGCCCTGAATGGGAACATCACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCACCATCCTGCTGCACTaGGGCCCCAGTGGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: FSLMFPTFKEALMIQMGATILLH*GPSGSK
Trigger: TTTGCTGCCACTGGGGCCCAAGTGCAGCAGGATGGT...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACCGACCGGCTTGGGGTaGGGCATCTGGGCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQPTGLG*GIWAVF
Trigger: GAAAACAGCCCAGATGCCCAACCCCAAGCCGGTCGG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS GCA 90 bp CTGATCTCAGAAGCCATTGCCACTGATATTAATGGACTGCAGATCTaGCACCTGCATGACGTTGATGCCACTGTTGGCAAGACGGGCAAT +
Preference number: 5 (lower is better)
Translates to: LISEAIATDINGLQI*HLHDVDATVGKTGN
Trigger: ATTGCCCGTCTTGCCAACAGTGGCATCAACGTCATGCAGGTGGCAGATCTGCAGTCCATTAATATCAGTGGCAATGGCTTCTGAGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTCCACCACCATTACCATaGCCCCCATTATTGCCACCA +
Preference number: 5 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGPPPLP*PPLLPP
Trigger: TGGTGGCAATAATGGGGGCAATGGTAATGGTGGTGG...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCGGGCCCTGGGAGTTGTaGCTGTTCTCATTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAGPWEL*LFSLGD
Trigger: GTCACCCAATGAGAACAGCAACAACTCCCAGGGCCC...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGAAGACTCACTGCCATaGCTGCCATTGGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGEDSLP*LPLVLL
Trigger: CAGCAGTACCAATGGCAGCAATGGCAGTGAGTCTTC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATCAACTGACCTGTCCATaGGGCCCCACTGTTGGTGTC +
Preference number: 5 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDQLTCP*GPTVGV
Trigger: GACACCAACAGTGGGGCCCAATGGACAGGTCAGTTG...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCACGGCAGGCCTTGAATaGGGTGCACCTGGATTCCTG +
Preference number: 5 (lower is better)
Translates to: FSLMFPTFKEALMIQMGATAGLE*GAPGFL
Trigger: CAGGAATCCAGGTGCACCCAATTCAAGGCCTGCCGT...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAAGCCAACGGCAGGCCTaGAATTGGGTGCACCTGGAT +
Preference number: 5 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPSQRQA*NWVHLD
Trigger: ATCCAGGTGCACCCAATTCAAGGCCTGCCGTTGGCT...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCACGTTGATGCCACTGTaGGCAAGACGGGCAATGCCC +
Preference number: 5 (lower is better)
Translates to: FSLMFPTFKEALMIQMGATLMPL*ARRAMP
Trigger: GGGCATTGCCCGTCTTGCCAACAGTGGCATCAACGT...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAATGGACCCATGCTACCTaGCATCCCGGGGTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQWTHAT*HPGVKG
Trigger: CCCCTTAACCCCGGGATGCAAGGTAGCATGGGTCCA...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGTGGACCCATGCTACCTaGCATCCCGGGGTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSWTHAT*HPGVKG
Trigger: CCCCTTAACCCCGGGATGCAAGGTAGCATGGGTCCA...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 90 bp CGATTTGTGATAATCTGTTGGTTTGCACCTGGTATGATCTGTATTTaGCCAGAACCATCCTGCTGCACTTGGGCCCCAGTGGCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: RFVIICWFAPGMICI*PEPSCCTWAPVAAN
Trigger: GTTTGCTGCCACTGGGGCCCAAGTGCAGCAGGATGGTTCTGGTCAAATACAGATCATACCAGGTGCAAACCAACAGATTATCACAAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGGGGCCCTGGGAGTTGTaGCTGTTCTCATTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSGPWEL*LFSLGD
Trigger: GTCACCCAATGAGAACAGCAACAACTCCCAGGGCCC...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAACTCGGGCCCTGGGAGTaGTTGCTGTTCTCATTGGGT +
Preference number: 5 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQLGPWE*LLFSLG
Trigger: ACCCAATGAGAACAGCAACAACTCCCAGGGCCCGAG...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCTCGGGCCCTGGGAGTaGTTGCTGTTCTCATTGGGT +
Preference number: 5 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSLGPWE*LLFSLG
Trigger: ACCCAATGAGAACAGCAACAACTCCCAGGGCCCGAG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTGCTGGTTCTGTAAGTaGGGAGCGGCAGCCACAACA +
Preference number: 5 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDCWFCK*GAAATT
Trigger: TGTTGTGGCTGCCGCTCCCAACTTACAGAACCAGCA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCAACTGACCTGTCCATaGGGCCCCACTGTTGGTGTC +
Preference number: 5 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSQLTCP*GPTVGV
Trigger: GACACCAACAGTGGGGCCCAATGGACAGGTCAGTTG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTACCCCATCTCCTCTCTaGTATCCCTCTCCTGATTCT +
Preference number: 5 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGTPSPL*YPSPDS
Trigger: AGAATCAGGAGAGGGATACAAGAGAGGAGATGGGGT...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CCA 90 bp GTTGCCTCCACTTCCTCGATTTGTGATAATCTGTTGGTTTGCACCTaGTATGATCTGTATTTGACCAGAACCATCCTGCTGCACTTGGGC +
Preference number: 5 (lower is better)
Translates to: VASTSSICDNLLVCT*YDLYLTRTILLHLG
Trigger: GCCCAAGTGCAGCAGGATGGTTCTGGTCAAATACAGATCATACCAGGTGCAAACCAACAGATTATCACAAATCGAGGAAGTGGAGGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGAAGACTCACTGCCATaGCTGCCATTGGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDEDSLP*LPLVLL
Trigger: CAGCAGTACCAATGGCAGCAATGGCAGTGAGTCTTC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAATGCTGGTTCTGTAAGTaGGGAGCGGCAGCCACAACA +
Preference number: 5 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQCWFCK*GAAATT
Trigger: TGTTGTGGCTGCCGCTCCCAACTTACAGAACCAGCA...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTACCATCCTGCTGCACTaGGGCCCCAGTGGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFTILLH*GPSGSK
Trigger: TTTGCTGCCACTGGGGCCCAAGTGCAGCAGGATGGT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGCTGCAGAAACGCTGTaGACAGGTAGCAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDAAETL*TGSKVM
Trigger: CATCACCTTGCTACCTGTCAACAGCGTTTCTGCAGC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTCCAGATGTCTGGTTTaGCTGGATGTTCAGAGCATC +
Preference number: 5 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGSRCLV*LDVQSI
Trigger: GATGCTCTGAACATCCAGCAAAACCAGACATCTGGA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATTCCTGGGAGATGGCTaGAGTTGTAAAGGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPFLGDG*SCKGLP
Trigger: GGGCAGACCTTTACAACTCAAGCCATCTCCCAGGAA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCTGGCATGGAGGAGAGTaGAGCAGCATTCACAGTGAC +
Preference number: 5 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAWHGGE*SSIHSD
Trigger: GTCACTGTGAATGCTGCTCAACTCTCCTCCATGCCA...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAATATGCTGTTTCTTTTaGCCAGGATCCCCCGAGCCC +
Preference number: 5 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPICCFF*PGSPEP
Trigger: GGGCTCGGGGGATCCTGGCAAAAAGAAACAGCATAT...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGCCCACAGAGTGCCAGTaGGAAATCCCTGAAGGAAGA +
Preference number: 5 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMPTECQ*EIPEGR
Trigger: TCTTCCTTCAGGGATTTCCAACTGGCACTCTGTGGG...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCCCCACAGAGTGCCAGTaGGAAATCCCTGAAGGAAGA +
Preference number: 5 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAPTECQ*EIPEGR
Trigger: TCTTCCTTCAGGGATTTCCAACTGGCACTCTGTGGG...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATTTAGGCACCAGAGATaGGAGCACCACCCATCCCTT +
Preference number: 5 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPFRHQR*EHHPSL
Trigger: AAGGGATGGGTGGTGCTCCAATCTCTGGTGCCTAAA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCTTTAGGCACCAGAGATaGGAGCACCACCCATCCCTT +
Preference number: 5 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAFRHQR*EHHPSL
Trigger: AAGGGATGGGTGGTGCTCCAATCTCTGGTGCCTAAA...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCCACCACCATTACCATaGCCCCCATTATTGCCACCA +
Preference number: 5 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSPPPLP*PPLLPP
Trigger: TGGTGGCAATAATGGGGGCAATGGTAATGGTGGTGG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGAGACTGTGCGATTCTaGGAAGACTCACTGCCATTG +
Preference number: 5 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPETVRF*EDSLPL
Trigger: CAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGTTCCTGGGAGATGGCTaGAGTTGTAAAGGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSFLGDG*SCKGLP
Trigger: GGGCAGACCTTTACAACTCAAGCCATCTCCCAGGAA...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGGTGATTGTTTGGGCTaGTGGGTTCTGAACTTGGAG +
Preference number: 5 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDGDCLG*WVLNLE
Trigger: CTCCAAGTTCAGAACCCACAAGCCCAAACAATCACC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGGTGATTGTTTGGGCTaGTGGGTTCTGAACTTGGAG +
Preference number: 5 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMGDCLG*WVLNLE
Trigger: CTCCAAGTTCAGAACCCACAAGCCCAAACAATCACC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGGTGTGAGAGTGGTGTaGCTGCTGCTGGTCTGCCCC +
Preference number: 5 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTGVRVV*LLLVCP
Trigger: GGGGCAGACCAGCAGCAGCAACACCACTCTCACACC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGTGGCATGGAGGAGAGTaGAGCAGCATTCACAGTGAC +
Preference number: 5 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSWHGGE*SSIHSD
Trigger: GTCACTGTGAATGCTGCTCAACTCTCCTCCATGCCA...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTACGGCAGGCCTTGAATaGGGTGCACCTGGATTCCTG +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFTAGLE*GAPGFL
Trigger: CAGGAATCCAGGTGCACCCAATTCAAGGCCTGCCGT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTAGCCAACGGCAGGCCTaGAATTGGGTGCACCTGGAT +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFSQRQA*NWVHLD
Trigger: ATCCAGGTGCACCCAATTCAAGGCCTGCCGTTGGCT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCCGACCGGCTTGGGGTaGGGCATCTGGGCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTPTGLG*GIWAVF
Trigger: GAAAACAGCCCAGATGCCCAACCCCAAGCCGGTCGG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAATATGCTGTTTCTTTTaGCCAGGATCCCCCGAGCCC +
Preference number: 5 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQICCFF*PGSPEP
Trigger: GGGCTCGGGGGATCCTGGCAAAAAGAAACAGCATAT...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCCTGTGTGTGTACGTTaGTGCCTCTGTAGCTCATCC +
Preference number: 5 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSPVCVR*CLCSSS
Trigger: GGATGAGCTACAGAGGCACAAACGTACACACACAGG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTCTCTTCCATGTCTCTaGGACCCATGCTACCTTGCA +
Preference number: 5 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDSLPCL*DPCYLA
Trigger: TGCAAGGTAGCATGGGTCCAAGAGACATGGAAGAGA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGAAGCTGCTTCTGTTTaGAGGCCAAACAAGATACTG +
Preference number: 5 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGEAASV*RPNKIL
Trigger: CAGTATCTTGTTTGGCCTCAAAACAGAAGCAGCTTC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTCAAAGGGCCCCTCACTaGAGGCAGCTAGACTGTCCT +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFQRAPH*RQLDCP
Trigger: AGGACAGTCTAGCTGCCTCAAGTGAGGGGCCCTTTG...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTTTCCTTTCCCTGCCTaGGATCTAAGGCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDFPFPA*DLRQVS
Trigger: GCTCACTTGCCTTAGATCCAAGGCAGGGAAAGGAAA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTGGTGTGGACTGGTTATaGCCAGTGTTAAGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGGVDWL*PVLREK
Trigger: TTTCTCTCTTAACACTGGCAATAACCAGTCCACACC...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCCCATTGCCCCCATTATaGCCACCAACTCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAPLPPL*PPTPFS
Trigger: TGAAAAAGGAGTTGGTGGCAATAATGGGGGCAATGG...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCCTGTGTCTGCTGGTTTaGCTCTCCTTCTTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: FSLMFPTFKEALMIQMGALCLLV*LSFFLL
Trigger: CAGCAAAAAGAAGGAGAGCAAAACCAGCAGACACAG...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGCTGTGTCTGCTGGTTTaGCTCTCCTTCTTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMLCLLV*LSFFLL
Trigger: CAGCAAAAAGAAGGAGAGCAAAACCAGCAGACACAG...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATAGGCTGGATAAGAATTaGTTGCTGCTGTGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDRLDKN*LLLCLL
Trigger: CAGCAGACACAGCAGCAACAAATTCTTATCCAGCCT...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCCACTAGCACATGCTTaGGAGGAGTTCTGCAGAATG +
Preference number: 5 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSPLAHA*EEFCRM
Trigger: CATTCTGCAGAACTCCTCCAAAGCATGTGCTAGTGG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATGGAAGACGGTGTGGGTaGTTACTGTTCTGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDGRRCG*LLFWVK
Trigger: TTTTACCCAGAACAGTAACAACCCACACCGTCTTCC...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTACTGTCCTTATTTCCTaGGTACCTGATCTCCAAAAC +
Preference number: 5 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGTVLIS*VPDLQN
Trigger: GTTTTGGAGATCAGGTACCAAGGAAATAAGGACAGT...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCACAATGTTTTCCGGGGTaGGAGAAGTGCCATATCTTC +
Preference number: 5 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPQCFPG*EKCHIF
Trigger: GAAGATATGGCACTTCTCCAACCCCGGAAAACATTG...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS GCA 90 bp AATGATGTTGCCTCCACTTCCTCGATTTGTGATAATCTGTTGGTTTaGACCTGGTATGATCTGTATTTGACCAGAACCATCCTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: NDVASTSSICDNLLV*TWYDLYLTRTILLH
Trigger: GTGCAGCAGGATGGTTCTGGTCAAATACAGATCATACCAGGTGCAAACCAACAGATTATCACAAATCGAGGAAGTGGAGGCAACATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGCCATTGCCCCCATTATaGCCACCAACTCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSPLPPL*PPTPFS
Trigger: TGAAAAAGGAGTTGGTGGCAATAATGGGGGCAATGG...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTTGTTGCTGTTCTCATaGGGTGACTCAATTCTGCTG +
Preference number: 5 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMLLLFS*GDSILL
Trigger: CAGCAGAATTGAGTCACCCAATGAGAACAGCAACAA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAATAGCAGCAATGATGTaGCCTCCACTTCCTCGATTT +
Preference number: 5 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPIAAMM*PPLPRF
Trigger: AAATCGAGGAAGTGGAGGCAACATCATTGCTGCTAT...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTGCTGCAGAAACGCTGTaGACAGGTAGCAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFAAETL*TGSKVM
Trigger: CATCACCTTGCTACCTGTCAACAGCGTTTCTGCAGC...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AGAAGGTCGAGAGAGACAATGCTTTTATGGCTGGGCCTTGAGGACAATTCTGGTTTCATAATTCCCATGTaGCTGGTGGTAGTAGTAGTT +
Preference number: 5 (lower is better)
Translates to: RRSRETMLLWLGLEDNSGFIIPM*LVVVVV
Trigger: AACTACTACTACCACCAGCAACATGGGAATTATGAA...ACCAGAATTGTCCTCAAGGCCCAGCCATAAAAGCATTGTCTCTCTCGACCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGTCCAGATGTCTGGTTTaGCTGGATGTTCAGAGCATC +
Preference number: 5 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSSRCLV*LDVQSI
Trigger: GATGCTCTGAACATCCAGCAAAACCAGACATCTGGA...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATCTGGATAAGAATTTGTaGCTGCTGTGTCTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDLDKNL*LLCLLV
Trigger: AACCAGCAGACACAGCAGCAACAAATTCTTATCCAG...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCATCCATGGCTACCATATaGGTGGTAATAAGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPSMATI*VVIRAE
Trigger: TTCAGCCCTTATTACCACCAATATGGTAGCCATGGA...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTGCGTCAGTAGTATTTaGAACACTCCCTCCACAGTT +
Preference number: 5 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDCVSSI*NTPSTV
Trigger: AACTGTGGAGGGAGTGTTCAAAATACTACTGACGCA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAATTTTATGGCTGGGCCTaGAGGACAATTCTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQFYGWA*RTILVA
Trigger: TGCAACCAGAATTGTCCTCAAGGCCCAGCCATAAAA...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CTCATGGTAATGCTAATGAATAGGGTTGAGGGTAAACCAGCAGCTTTTCATTCGTTTTATGGCTGGGCCTaGAGGACAATTCTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: LMVMLMNRVEGKPAAFHSFYGWA*RTILVA
Trigger: TGCAACCAGAATTGTCCTCAAGGCCCAGCCATAAAA...CGAATGAAAAGCTGCTGGTTTACCCTCAACCCTATTCATTAGCATTACCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGGAAGACGGTGTGGGTaGTTACTGTTCTGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQGRRCG*LLFWVK
Trigger: TTTTACCCAGAACAGTAACAACCCACACCGTCTTCC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCAAAGGGCCCCTCACTaGAGGCAGCTAGACTGTCCT +
Preference number: 5 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTQRAPH*RQLDCP
Trigger: AGGACAGTCTAGCTGCCTCAAGTGAGGGGCCCTTTG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCAGCAAGTGAGCCAAATTaGGAAGAGGGAGTAGGAATT +
Preference number: 5 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPASEPN*EEGVGI
Trigger: AATTCCTACTCCCTCTTCCAAATTTGGCTCACTTGC...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCGGTGTGGACTGGTTATaGCCAGTGTTAAGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAGVDWL*PVLREK
Trigger: TTTCTCTCTTAACACTGGCAATAACCAGTCCACACC...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 90 bp GGTAGTAAAGTTCATAATTCCCATGTTGCTGGTGGTAGTAGTAGTTaGGTAGCTATTGGCATTGGTGAAAAAGGAGCTGGAACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: GSKVHNSHVAGGSSS*VAIGIGEKGAGTGL
Trigger: CAAGCCAGTTCCAGCTCCTTTTTCACCAATGCCAATAGCTACTCAACTACTACTACCACCAGCAACATGGGAATTATGAACTTTACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTATGATCTGCCAGCCATaGGCACCCTGTGAAAGTTGT +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFMICQP*APCESC
Trigger: ACAACTTTCACAGGGTGCCAATGGCTGGCAGATCAT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAATAGCAGCAATGATGTaGCCTCCACTTCCTCGATTT +
Preference number: 5 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQIAAMM*PPLPRF
Trigger: AAATCGAGGAAGTGGAGGCAACATCATTGCTGCTAT...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp AACACCATGCATTTTAATGCTTCATGGCTCTCTCTTCCATGTCTCTTGGACCCACATCTACAGAAAAGCTaGATGTGTCACAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: NTMHFNASWLSLPCLLDPHLQKS*MCHNKA
Trigger: AGCCTTGTTGTGACACATCAAGCTTTTCTGTAGATG...TGGGTCCAAGAGACATGGAAGAGAGAGCCATGAAGCATTAAAATGCATGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTCCACTAGCACATGCTTaGGAGGAGTTCTGCAGAATG +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFPLAHA*EEFCRM
Trigger: CATTCTGCAGAACTCCTCCAAAGCATGTGCTAGTGG...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGCTGTGCATGGATGACTaGTATCTCAGCGTTAATAGA +
Preference number: 5 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMLCMDD*YLSVNR
Trigger: TCTATTAACGCTGAGATACAAGTCATCCATGCACAG...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAGCAAGTGAGCCAAATTaGGAAGAGGGAGTAGGAATT +
Preference number: 5 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQASEPN*EEGVGI
Trigger: AATTCCTACTCCCTCTTCCAAATTTGGCTCACTTGC...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGTTCATAATTCCCATGTaGCTGGTGGTAGTAGTAGTT +
Preference number: 5 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMFIIPM*LVVVVV
Trigger: AACTACTACTACCACCAGCAACATGGGAATTATGAA...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTCCTGTGTGTGTACGTTaGTGCCTCTGTAGCTCATCC +
Preference number: 5 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTPVCVR*CLCSSS
Trigger: GGATGAGCTACAGAGGCACAAACGTACACACACAGG...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAAATGACCAAGGTATTTaGGTCACAGAATGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQNDQGI*VTEWSS
Trigger: GGAAGACCATTCTGTGACCAAAATACCTTGGTCATT...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp CATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGATTCTTCAAAGGGACTCTaGTACAATTCCACTGAAAGA +
Preference number: 5 (lower is better)
Translates to: HSSELSCPFPPKDAKVHDSSKGL*YNSTER
Trigger: TCTTTCAGTGGAATTGTACAAGAGTCCCTTTGAAGA...ATCATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGCACATACAAAAACACTaGCTTTCTATCAGATCAGGG +
Preference number: 5 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMHIQKH*LSIRSG
Trigger: CCCTGATCTGATAGAAAGCAAGTGTTTTTGTATGTG...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCCACATACAAAAACACTaGCTTTCTATCAGATCAGGG +
Preference number: 5 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAHIQKH*LSIRSG
Trigger: CCCTGATCTGATAGAAAGCAAGTGTTTTTGTATGTG...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCACCTTTCTTTCATCCTaGTACATAAGTTACTGGCTC +
Preference number: 5 (lower is better)
Translates to: FSLMFPTFKEALMIQMGATFLSS*YISYWL
Trigger: GAGCCAGTAACTTATGTACAAGGATGAAAGAAAGGT...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTCAATGTTTTCCGGGGTaGGAGAAGTGCCATATCTTC +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFQCFPG*EKCHIF
Trigger: GAAGATATGGCACTTCTCCAACCCCGGAAAACATTG...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTATGATCTGCCAGCCATaGGCACCCTGTGAAAGTTGT +
Preference number: 5 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTMICQP*APCESC
Trigger: ACAACTTTCACAGGGTGCCAATGGCTGGCAGATCAT...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGAGACTGTGCGATTCTaGGAAGACTCACTGCCATTG +
Preference number: 5 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTETVRF*EDSLPL
Trigger: CAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TACATTCCAGTGAGTTATCCTGCCCCTTTCCTCCAAAAGATGCCAAAGTACATGGAACTGTGGGATTACTaGATACTGAATATTAGGCAT +
Preference number: 5 (lower is better)
Translates to: YIPVSYPAPFLQKMPKYMELWDY*ILNIRH
Trigger: ATGCCTAATATTCAGTATCAAGTAATCCCACAGTTC...CATGTACTTTGGCATCTTTTGGAGGAAAGGGGCAGGATAACTCACTGGAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCATTTGTGATAATCTGTaGGTTTGCACCTGGTATGAT +
Preference number: 5 (lower is better)
Translates to: FSLMFPTFKEALMIQMGAICDNL*VCTWYD
Trigger: ATCATACCAGGTGCAAACCAACAGATTATCACAAAT...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTCTGGATAAGAATTTGTaGCTGCTGTGTCTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFLDKNL*LLCLLV
Trigger: AACCAGCAGACACAGCAGCAACAAATTCTTATCCAG...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTTCCATGGCTACCATATaGGTGGTAATAAGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFSMATI*VVIRAE
Trigger: TTCAGCCCTTATTACCACCAATATGGTAGCCATGGA...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAATCTTCAAAGGGACTCTaGTACAATTCCACTGAAAGA +
Preference number: 5 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQSSKGL*YNSTER
Trigger: TCTTTCAGTGGAATTGTACAAGAGTCCCTTTGAAGA...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp TTTTCACTAATGTTTCCCACCTTCAAAGAGGCACTGATGATACAGATGGGTGCCAGGTCTCTTTTAATATaGGCTAGCAGAAAACCTATC +
Preference number: 5 (lower is better)
Translates to: FSLMFPTFKEALMIQMGARSLLI*ASRKPI
Trigger: GATAGGTTTTCTGCTAGCCAATATTAAAAGAGACCT...GGCACCCATCTGTATCATCAGTGCCTCTTTGAAGGTGGGAAACATTAGTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTGAAGCTGCTTCTGTTTaGAGGCCAAACAAGATACTG +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFEAASV*RPNKIL
Trigger: CAGTATCTTGTTTGGCCTCAAAACAGAAGCAGCTTC...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTTTTCCTTTCCCTGCCTaGGATCTAAGGCAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTFPFPA*DLRQVS
Trigger: GCTCACTTGCCTTAGATCCAAGGCAGGGAAAGGAAA...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTAATGACCAAGGTATTTaGGTCACAGAATGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFNDQGI*VTEWSS
Trigger: GGAAGACCATTCTGTGACCAAAATACCTTGGTCATT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTAAACTTAGAGCTACCTaGGAAGACAGCAGTACCAAA +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFKLRAT*EDSSTK
Trigger: TTTGGTACTGCTGTCTTCCAAGGTAGCTCTAAGTTT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGATCAGTCTCTTCTGAAATCAGGTCACAGAGAAAACAGGATGATTTCTCCCAAAGGTCTCTTTTAATATaGGCTAGCAGAAAACCTATC +
Preference number: 5 (lower is better)
Translates to: GSVSSEIRSQRKQDDFSQRSLLI*ASRKPI
Trigger: GATAGGTTTTCTGCTAGCCAATATTAAAAGAGACCT...TTGGGAGAAATCATCCTGTTTTCTCTGTGACCTGATTTCAGAAGAGACTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTCTGTGCATGGATGACTaGTATCTCAGCGTTAATAGA +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFLCMDD*YLSVNR
Trigger: TCTATTAACGCTGAGATACAAGTCATCCATGCACAG...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp GGTCAAACAAATGCTCATCAAAGCGTGGCACCAACAGAATTTTCACTAATGTTTACTGTCCTTATTTCCTaGGTACCTGATCTCCAAAAC +
Preference number: 5 (lower is better)
Translates to: GQTNAHQSVAPTEFSLMFTVLIS*VPDLQN
Trigger: GTTTTGGAGATCAGGTACCAAGGAAATAAGGACAGT...AAACATTAGTGAAAATTCTGTTGGTGCCACGCTTTGATGAGCATTTGTTTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTTGGTATGATCTGTATTaGACCAGAACCATCCTGCTG +
Preference number: 5 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTWYDLY*TRTILL
Trigger: CAGCAGGATGGTTCTGGTCAAATACAGATCATACCA...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTATAAGAACCACTGTCTaGCCACTAGCACATGCTTTG +
Preference number: 5 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTIRTTV*PLAHAL
Trigger: CAAAGCATGTGCTAGTGGCAAGACAGTGGTTCTTAT...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS-3UTR CAA 90 bp ATACAAACTGAGCCAAGATTATTATCTTCAAAGGGACTCTTGTACAATTCCACTGAACTGTGGGATTACTaGATACTGAATATTAGGCAT +
Preference number: 5 (lower is better)
Translates to: IQTEPRLLSSKGLLYNSTELWDY*ILNIRH
Trigger: ATGCCTAATATTCAGTATCAAGTAATCCCACAGTTC...AGTGGAATTGTACAAGAGTCCCTTTGAAGATAATAATCTTGGCTCAGTTTGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CAA 72 bp GCATGCTTCCCGCCGGGTCCTCCGACCGGCTTGGGGTaGGGCATCTGGGCTGTTTTCTCCTTCCTCTCCACC +
Preference number: 6 (lower is better)
Translates to: ACFPPGPPTGLG*GIWAVFSFLST
Trigger: GGTGGAGAGGAAGGAGAAAACAGCCCAGATGCCCAACCCCAAGCCGGTCGGAGGACCCGGCGGGAAGCATGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CAA 72 bp GCAGGTGCATGCTTCCCGCCGGGTCCTCCGACCGGCTaGGGGTTGGGCATCTGGGCTGTTTTCTCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: AGACFPPGPPTG*GLGIWAVFSFL
Trigger: GAGGAAGGAGAAAACAGCCCAGATGCCCAACCCCAAGCCGGTCGGAGGACCCGGCGGGAAGCATGCACCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CCA 72 bp CATGCTTCCCGCCGGGTCCTCCGACCGGCTTGGGGTTaGGCATCTGGGCTGTTTTCTCCTTCCTCTCCACCT +
Preference number: 6 (lower is better)
Translates to: HASRRVLRPAWG*ASGLFSPSSPP
Trigger: AGGTGGAGAGGAAGGAGAAAACAGCCCAGATGCCCAACCCCAAGCCGGTCGGAGGACCCGGCGGGAAGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CCA 72 bp CAGGTGCATGCTTCCCGCCGGGTCCTCCGACCGGCTTaGGGTTGGGCATCTGGGCTGTTTTCTCCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: QVHASRRVLRPA*GWASGLFSPSS
Trigger: AGAGGAAGGAGAAAACAGCCCAGATGCCCAACCCCAAGCCGGTCGGAGGACCCGGCGGGAAGCATGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS GCA 72 bp GGGACTCCTGCCCTCCTCCTCCAGTGCTGCTGCTACTaGCTGTGCTGCTACTTCGAGCCTGTGAAAAGGCAC +
Preference number: 6 (lower is better)
Translates to: GTPALLLQCCCY*LCCYFEPVKRH
Trigger: GTGCCTTTTCACAGGCTCGAAGTAGCAGCACAGGCAGTAGCAGCAGCACTGGAGGAGGAGGGCAGGAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS GCA 72 bp CCATCCTGCTGCACTTGGGCCCCAGTGGCAGCAAACTaGAGCTGTTGCCCATCAACGGTCTGGAACTGTGGG +
Preference number: 6 (lower is better)
Translates to: PSCCTWAPVAAN*SCCPSTVWNCG
Trigger: CCCACAGTTCCAGACCGTTGATGGGCAACAGCTGCAGTTTGCTGCCACTGGGGCCCAAGTGCAGCAGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS GCA 72 bp TGGCACCCTGCCCTCCTCCTCCAGTGCTGCTGCTACTaGCTGTGCTGCTACTTCGAGCCTGTGAAAAGGCAC +
Preference number: 6 (lower is better)
Translates to: WHPALLLQCCCY*LCCYFEPVKRH
Trigger: GTGCCTTTTCACAGGCTCGAAGTAGCAGCACAGGCAGTAGCAGCAGCACTGGAGGAGGAGGGCAGGGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551969.5
CDS TCA 72 bp CTCTCCTGGGACCCAGAGCTGCTGATCGTGACTGCCTaGGAGCTGGGAGTCAAGGTAGCTGCAGAAACGCTG +
Preference number: 6 (lower is better)
Translates to: LSWDPELLIVTA*ELGVKVAAETL
Trigger: CAGCGTTTCTGCAGCTACCTTGACTCCCAGCTCTCAGGCAGTCACGATCAGCAGCTCTGGGTCCCAGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 72 bp GCTGGATGTTCAGAGCATCAGACCCCTGTAGCCCACTaGCCCTCTGGGGTGTCTGGCCTTGAGAGTTGGTCC +
Preference number: 6 (lower is better)
Translates to: AGCSEHQTPVAH*PSGVSGLESWS
Trigger: GGACCAACTCTCAAGGCCAGACACCCCAGAGGGTCAGTGGGCTACAGGGGTCTGATGCTCTGAACATCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 72 bp TTGTGTGGCTGTGAGGTCAAGCTCACCTGTTCCCCCTaGCTGACTCGGGCCCTGGGAGTTGTTGCTGTTCTC +
Preference number: 6 (lower is better)
Translates to: LCGCEVKLTCSP*LTRALGVVAVL
Trigger: GAGAACAGCAACAACTCCCAGGGCCCGAGTCAGTCAGGGGGAACAGGTGAGCTTGACCTCACAGCCACACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS TCA 72 bp GCCAGCCATTGGCACCCTGTGAAAGTTGTGTGGCTGTaGGGTCAAGCTCACCTGTTCCCCCTGACTGACTCG +
Preference number: 6 (lower is better)
Translates to: ASHWHPVKVVWL*GQAHLFPLTDS
Trigger: CGAGTCAGTCAGGGGGAACAGGTGAGCTTGACCTCACAGCCACACAACTTTCACAGGGTGCCAATGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS CAA 72 bp TGCAGATCTGCCACCTGCATGACGTTGATGCCACTGTaGGCAAGACGGGCAATGCCCTCTGGACAGATGGCC +
Preference number: 6 (lower is better)
Translates to: CRSATCMTLMPL*ARRAMPSGQMA
Trigger: GGCCATCTGTCCAGAGGGCATTGCCCGTCTTGCCAACAGTGGCATCAACGTCATGCAGGTGGCAGATCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CAA 90 bp GGAGCGGCAGCCACAACATACTGCCCACCAGAGACTGTGCGATTCTaGGAAGACTCACTGCCATTGCTGCCATTGGTACTGCTGCCACTC +
Preference number: 6 (lower is better)
Translates to: GAAATTYCPPETVRF*EDSLPLLPLVLLPL
Trigger: GAGTGGCAGCAGTACCAATGGCAGCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTCTGGTGGGCAGTATGTTGTGGCTGCCGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS TCA 72 bp CCCTGTAGCCCACTGACCCTCTGGGGTGTCTGGCCTTaGGAGTTGGTCCCTGATGATCCACTGGTAGTAAAG +
Preference number: 6 (lower is better)
Translates to: PCSPLTLWGVWP*ELVPDDPLVVK
Trigger: CTTTACTACCAGTGGATCATCAGGGACCAACTCTCAAGGCCAGACACCCCAGAGGGTCAGTGGGCTACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 72 bp GAACTTGGAGGTTCTGCAGCTGTAGAGTCTGCCAACTaGCCTGTCCATTGGGCCCCACTGTTGGTGTCCGGA +
Preference number: 6 (lower is better)
Translates to: ELGGSAAVESAN*PVHWAPLLVSG
Trigger: TCCGGACACCAACAGTGGGGCCCAATGGACAGGTCAGTTGGCAGACTCTACAGCTGCAGAACCTCCAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 72 bp GGCCTGGCATGGAGGAGAGTTGAGCAGCATTCACAGTaGCTGTGCCAGCAGGAATGGAAGCAGCTGAGGCAA +
Preference number: 6 (lower is better)
Translates to: GLAWRRVEQHSQ*LCQQEWKQLRQ
Trigger: TTGCCTCAGCTGCTTCCATTCCTGCTGGCACAGTCACTGTGAATGCTGCTCAACTCTCCTCCATGCCAGGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS GCA 72 bp GTGTTGCTGCTGCTGGTCTGCCCCAAGGAAACACCCTaGATTGGGGCTAAGGTGATTGTTTGGGCTTGTGGG +
Preference number: 6 (lower is better)
Translates to: VLLLLVCPKETP*IGAKVIVWACG
Trigger: CCCACAAGCCCAAACAATCACCTTAGCCCCAATGCAGGGTGTTTCCTTGGGGCAGACCAGCAGCAGCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CCA 72 bp TTTGACCAGAACCATCCTGCTGCACTTGGGCCCCAGTaGCAGCAAACTGCAGCTGTTGCCCATCAACGGTCT +
Preference number: 6 (lower is better)
Translates to: FDQNHPAALGPQ*QQTAAVAHQRS
Trigger: AGACCGTTGATGGGCAACAGCTGCAGTTTGCTGCCACTGGGGCCCAAGTGCAGCAGGATGGTTCTGGTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CAA 90 bp GGCATCACTCCAGGTAGTCCTGTCAGAACTTGCTGGTTCTGTAAGTaGGGAGCGGCAGCCACAACATACTGCCCACCAGAGACTGTGCGA +
Preference number: 6 (lower is better)
Translates to: GITPGSPVRTCWFCK*GAAATTYCPPETVR
Trigger: TCGCACAGTCTCTGGTGGGCAGTATGTTGTGGCTGCCGCTCCCAACTTACAGAACCAGCAAGTTCTGACAGGACTACCTGGAGTGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CAA 90 bp TTAATGGACTGCAGATCTGCCACCTGCATGACGTTGATGCCACTGTaGGCAAGACGGGCAATGCCCTCTGGACAGATGGCCTCCATGGCT +
Preference number: 6 (lower is better)
Translates to: LMDCRSATCMTLMPL*ARRAMPSGQMASMA
Trigger: AGCCATGGAGGCCATCTGTCCAGAGGGCATTGCCCGTCTTGCCAACAGTGGCATCAACGTCATGCAGGTGGCAGATCTGCAGTCCATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 72 bp GCTGCTGCTACTGCCTGTGCTGCTACTTCGAGCCTGTaGAAAGGCACCACCACCATTACCATTGCCCCCATT +
Preference number: 6 (lower is better)
Translates to: AAATACAATSSL*KGTTTITIAPI
Trigger: AATGGGGGCAATGGTAATGGTGGTGGTGCCTTTTCACAGGCTCGAAGTAGCAGCACAGGCAGTAGCAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS TCA 72 bp ACTCGGGCCCTGGGAGTTGTTGCTGTTCTCATTGGGTaGCTCAATTCTGCTGCAAGTTGCTGCCAGCAGAGC +
Preference number: 6 (lower is better)
Translates to: TRALGVVAVLIG*LNSAASCCQQS
Trigger: GCTCTGCTGGCAGCAACTTGCAGCAGAATTGAGTCACCCAATGAGAACAGCAACAACTCCCAGGGCCCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS GCA 72 bp CTGTTCCCCCTGACTGACTCGGGCCCTGGGAGTTGTTaGTGTTCTCATTGGGTGACTCAATTCTGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: LFPLTDSGPGSC*CSHWVTQFCCK
Trigger: CTTGCAGCAGAATTGAGTCACCCAATGAGAACAGCAACAACTCCCAGGGCCCGAGTCAGTCAGGGGGAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS GCA 72 bp GAGCGGCAGCCACAACATACTGCCCACCAGAGACTGTaGGATTCTTGGAAGACTCACTGCCATTGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: ERQPQHTAHQRL*DSWKTHCHCCH
Trigger: ATGGCAGCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTCTGGTGGGCAGTATGTTGTGGCTGCCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CCA 72 bp AGTCTGCCAACTGACCTGTCCATTGGGCCCCACTGTTaGTGTCCGGATGATGATGGGACCAGAGTTTGGAAC +
Preference number: 6 (lower is better)
Translates to: SLPTDLSIGPHC*CPDDDGTRVWN
Trigger: GTTCCAAACTCTGGTCCCATCATCATCCGGACACCAACAGTGGGGCCCAATGGACAGGTCAGTTGGCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CCA 72 bp GTCCAGGGGCAAAGTGCCCACACTCAGAGCTACACCTaGGCCTCCCTTCTTATTCTGGTGGGTCTTGATATG +
Preference number: 6 (lower is better)
Translates to: VQGQSAHTQSYT*ASLLILVGLDM
Trigger: CATATCAAGACCCACCAGAATAAGAAGGGAGGCCCAGGTGTAGCTCTGAGTGTGGGCACTTTGCCCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CCA 72 bp GTTGATGCCACTGTTGGCAAGACGGGCAATGCCCTCTaGACAGATGGCCTCCATGGCTACCATATTGGTGGT +
Preference number: 6 (lower is better)
Translates to: VDATVGKTGNAL*TDGLHGYHIGG
Trigger: ACCACCAATATGGTAGCCATGGAGGCCATCTGTCCAGAGGGCATTGCCCGTCTTGCCAACAGTGGCATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CAA 72 bp TTCTGCAGCTGTAGAGTCTGCCAACTGACCTGTCCATaGGGCCCCACTGTTGGTGTCCGGATGATGATGGGA +
Preference number: 6 (lower is better)
Translates to: FCSCRVCQLTCP*GPTVGVRMMMG
Trigger: TCCCATCATCATCCGGACACCAACAGTGGGGCCCAATGGACAGGTCAGTTGGCAGACTCTACAGCTGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CAA 90 bp TGCACCTGGTATGATCTGTATTTGACCAGAACCATCCTGCTGCACTaGGGCCCCAGTGGCAGCAAACTGCAGCTGTTGCCCATCAACGGT +
Preference number: 6 (lower is better)
Translates to: CTWYDLYLTRTILLH*GPSGSKLQLLPING
Trigger: ACCGTTGATGGGCAACAGCTGCAGTTTGCTGCCACTGGGGCCCAAGTGCAGCAGGATGGTTCTGGTCAAATACAGATCATACCAGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CAA 90 bp ACTTGGAGGTTCTGCAGCTGTAGAGTCTGCCAACTGACCTGTCCATaGGGCCCCACTGTTGGTGTCCGGATGATGATGGGACCAGAGTTT +
Preference number: 6 (lower is better)
Translates to: TWRFCSCRVCQLTCP*GPTVGVRMMMGPEF
Trigger: AAACTCTGGTCCCATCATCATCCGGACACCAACAGTGGGGCCCAATGGACAGGTCAGTTGGCAGACTCTACAGCTGCAGAACCTCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 72 bp AGCTGGAGGTTCTGGAGGGTTTCCTGGGAGATGGCTTaGGTTGTAAAGGTCTGCCCTGACAATGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SWRFWRVSWEMA*VVKVCPDNGAA
Trigger: AGCAGCACCATTGTCAGGGCAGACCTTTACAACTCAAGCCATCTCCCAGGAAACCCTCCAGAACCTCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 72 bp ATTCACAGTGACTGTGCCAGCAGGAATGGAAGCAGCTaGGGCAATGGGTGTGAGAGTGGTGTTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: IHSDCASRNGSS*GNGCESGVAAA
Trigger: AGCAGCAGCAACACCACTCTCACACCCATTGCCTCAGCTGCTTCCATTCCTGCTGGCACAGTCACTGTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 72 bp AGGGGTATGGCCCATATGTCTCTGGCCCCGGGTGCCTaGTCTCAGAAGCCATTGCCACTGATATTAATGGAC +
Preference number: 6 (lower is better)
Translates to: RGMAHMSLAPGA*SQKPLPLILMD
Trigger: GTCCATTAATATCAGTGGCAATGGCTTCTGAGATCAGGCACCCGGGGCCAGAGACATATGGGCCATACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS GCA 72 bp GCCCACCAGAGACTGTGCGATTCTTGGAAGACTCACTaGCATTGCTGCCATTGGTACTGCTGCCACTCTGTT +
Preference number: 6 (lower is better)
Translates to: AHQRLCDSWKTH*HCCHWYCCHSV
Trigger: AACAGAGTGGCAGCAGTACCAATGGCAGCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTCTGGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CCA 72 bp ACTGACTCGGGCCCTGGGAGTTGTTGCTGTTCTCATTaGGTGACTCAATTCTGCTGCAAGTTGCTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: TDSGPGSCCCSH*VTQFCCKLLPA
Trigger: TGCTGGCAGCAACTTGCAGCAGAATTGAGTCACCCAATGAGAACAGCAACAACTCCCAGGGCCCGAGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS CCA 72 bp CAGGTAGTCCTGTCAGAACTTGCTGGTTCTGTAAGTTaGGAGCGGCAGCCACAACATACTGCCCACCAGAGA +
Preference number: 6 (lower is better)
Translates to: QVVLSELAGSVS*ERQPQHTAHQR
Trigger: TCTCTGGTGGGCAGTATGTTGTGGCTGCCGCTCCCAACTTACAGAACCAGCAAGTTCTGACAGGACTACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CAA 72 bp TATGATCTGTATTTGACCAGAACCATCCTGCTGCACTaGGGCCCCAGTGGCAGCAAACTGCAGCTGTTGCCC +
Preference number: 6 (lower is better)
Translates to: YDLYLTRTILLH*GPSGSKLQLLP
Trigger: GGGCAACAGCTGCAGTTTGCTGCCACTGGGGCCCAAGTGCAGCAGGATGGTTCTGGTCAAATACAGATCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CAA 90 bp TACTGCCCACCAGAGACTGTGCGATTCTTGGAAGACTCACTGCCATaGCTGCCATTGGTACTGCTGCCACTCTGTTCCTTTGAGGTAGGG +
Preference number: 6 (lower is better)
Translates to: YCPPETVRFLEDSLP*LPLVLLPLCSFEVG
Trigger: CCCTACCTCAAAGGAACAGAGTGGCAGCAGTACCAATGGCAGCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTCTGGTGGGCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS TCA 72 bp GGCCACTGGTACATTGGTCACATACTGAGTCTGTCCTaGGAGTACATTATTAGCCAGGCCTTGGAGGGGGAC +
Preference number: 6 (lower is better)
Translates to: GHWYIGHILSLS*EYIISQALEGD
Trigger: GTCCCCCTCCAAGGCCTGGCTAATAATGTACTCTCAGGACAGACTCAGTATGTGACCAATGTACCAGTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 72 bp CAACGGCAGGCCTTGAATTGGGTGCACCTGGATTCCTaGAGTACCCAATGCACTGAGGTTAATGGTCTGGAG +
Preference number: 6 (lower is better)
Translates to: QRQALNWVHLDS*STQCTEVNGLE
Trigger: CTCCAGACCATTAACCTCAGTGCATTGGGTACTTCAGGAATCCAGGTGCACCCAATTCAAGGCCTGCCGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 72 bp TCACCTGGGGCATTTGCTATAGCCAACGGCAGGCCTTaGATTGGGTGCACCTGGATTCCTGAAGTACCCAAT +
Preference number: 6 (lower is better)
Translates to: SPGAFAIANGRP*IGCTWIPEVPN
Trigger: ATTGGGTACTTCAGGAATCCAGGTGCACCCAATTCAAGGCCTGCCGTTGGCTATAGCAAATGCCCCAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS GCA 72 bp GGGAGTTGTTGCTGTTCTCATTGGGTGACTCAATTCTaGTGCAAGTTGCTGCCAGCAGAGCCAAAGGGGATG +
Preference number: 6 (lower is better)
Translates to: GSCCCSHWVTQF*CKLLPAEPKGM
Trigger: CATCCCCTTTGGCTCTGCTGGCAGCAACTTGCAGCAGAATTGAGTCACCCAATGAGAACAGCAACAACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS GCA 72 bp TGGTTCTGTAAGTTGGGAGCGGCAGCCACAACATACTaGCCACCAGAGACTGTGCGATTCTTGGAAGACTCA +
Preference number: 6 (lower is better)
Translates to: WFCKLGAAATTY*PPETVRFLEDS
Trigger: TGAGTCTTCCAAGAATCGCACAGTCTCTGGTGGGCAGTATGTTGTGGCTGCCGCTCCCAACTTACAGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CCA 72 bp CCACAACATACTGCCCACCAGAGACTGTGCGATTCTTaGAAGACTCACTGCCATTGCTGCCATTGGTACTGC +
Preference number: 6 (lower is better)
Translates to: PQHTAHQRLCDS*KTHCHCCHWYC
Trigger: GCAGTACCAATGGCAGCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTCTGGTGGGCAGTATGTTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CCA 72 bp ACATTATTAGCCAGGCCTTGGAGGGGGACAGCCTGCTaGAGTAGGTTTGGCATAGCAGCAATGATGTTGCCT +
Preference number: 6 (lower is better)
Translates to: TLLARPWRGTAC*SRFGIAAMMLP
Trigger: AGGCAACATCATTGCTGCTATGCCAAACCTACTCCAGCAGGCTGTCCCCCTCCAAGGCCTGGCTAATAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CAA 72 bp GCCACAACATACTGCCCACCAGAGACTGTGCGATTCTaGGAAGACTCACTGCCATTGCTGCCATTGGTACTG +
Preference number: 6 (lower is better)
Translates to: ATTYCPPETVRF*EDSLPLLPLVL
Trigger: CAGTACCAATGGCAGCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTCTGGTGGGCAGTATGTTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CAA 90 bp TTGCCACTGATATTAATGGACTGCAGATCTGCCACCTGCATGACGTaGATGCCACTGTTGGCAAGACGGGCAATGCCCTCTGGACAGATG +
Preference number: 6 (lower is better)
Translates to: LPLILMDCRSATCMT*MPLLARRAMPSGQM
Trigger: CATCTGTCCAGAGGGCATTGCCCGTCTTGCCAACAGTGGCATCAACGTCATGCAGGTGGCAGATCTGCAGTCCATTAATATCAGTGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS GCA 72 bp AGTTGTTGCTGTTCTCATTGGGTGACTCAATTCTGCTaGAAGTTGCTGCCAGCAGAGCCAAAGGGGATGGCT +
Preference number: 6 (lower is better)
Translates to: SCCCSHWVTQFC*KLLPAEPKGMA
Trigger: AGCCATCCCCTTTGGCTCTGCTGGCAGCAACTTGCAGCAGAATTGAGTCACCCAATGAGAACAGCAACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS GCA 72 bp AGACTGTGCGATTCTTGGAAGACTCACTGCCATTGCTaGCATTGGTACTGCTGCCACTCTGTTCCTTTGAGG +
Preference number: 6 (lower is better)
Translates to: RLCDSWKTHCHC*HWYCCHSVPLR
Trigger: CCTCAAAGGAACAGAGTGGCAGCAGTACCAATGGCAGCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS GCA 72 bp CAGAGACTGTGCGATTCTTGGAAGACTCACTGCCATTaGTGCCATTGGTACTGCTGCCACTCTGTTCCTTTG +
Preference number: 6 (lower is better)
Translates to: QRLCDSWKTHCH*CHWYCCHSVPL
Trigger: CAAAGGAACAGAGTGGCAGCAGTACCAATGGCAGCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS GCA 72 bp AGTACATTATTAGCCAGGCCTTGGAGGGGGACAGCCTaGTGGAGTAGGTTTGGCATAGCAGCAATGATGTTG +
Preference number: 6 (lower is better)
Translates to: STLLARPWRGTA*WSRFGIAAMML
Trigger: CAACATCATTGCTGCTATGCCAAACCTACTCCAGCAGGCTGTCCCCCTCCAAGGCCTGGCTAATAATGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS GCA 72 bp TTGCCACTGATATTAATGGACTGCAGATCTGCCACCTaGATGACGTTGATGCCACTGTTGGCAAGACGGGCA +
Preference number: 6 (lower is better)
Translates to: LPLILMDCRSAT*MTLMPLLARRA
Trigger: TGCCCGTCTTGCCAACAGTGGCATCAACGTCATGCAGGTGGCAGATCTGCAGTCCATTAATATCAGTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS GCA 72 bp GTTAAGGGGTATGGCCCATATGTCTCTGGCCCCGGGTaGCTGATCTCAGAAGCCATTGCCACTGATATTAAT +
Preference number: 6 (lower is better)
Translates to: VKGYGPYVSGPG*LISEAIATDIN
Trigger: ATTAATATCAGTGGCAATGGCTTCTGAGATCAGGCACCCGGGGCCAGAGACATATGGGCCATACCCCTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CCA 72 bp TTAGGCATCACTCCAGGTAGTCCTGTCAGAACTTGCTaGTTCTGTAAGTTGGGAGCGGCAGCCACAACATAC +
Preference number: 6 (lower is better)
Translates to: LGITPGSPVRTC*FCKLGAAATTY
Trigger: GTATGTTGTGGCTGCCGCTCCCAACTTACAGAACCAGCAAGTTCTGACAGGACTACCTGGAGTGATGCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CAA 72 bp CCAGAGACTGTGCGATTCTTGGAAGACTCACTGCCATaGCTGCCATTGGTACTGCTGCCACTCTGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: PETVRFLEDSLP*LPLVLLPLCSF
Trigger: AAAGGAACAGAGTGGCAGCAGTACCAATGGCAGCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS CAA 90 bp AGGGGGACAGCCTGCTGGAGTAGGTTTGGCATAGCAGCAATGATGTaGCCTCCACTTCCTCGATTTGTGATAATCTGTTGGTTTGCACCT +
Preference number: 6 (lower is better)
Translates to: RGTACWSRFGIAAMM*PPLPRFVIICWFAP
Trigger: AGGTGCAAACCAACAGATTATCACAAATCGAGGAAGTGGAGGCAACATCATTGCTGCTATGCCAAACCTACTCCAGCAGGCTGTCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS TCA 72 bp ATTGGGGCTAAGGTGATTGTTTGGGCTTGTGGGTTCTaGACTTGGAGGTTCTGCAGCTGTAGAGTCTGCCAA +
Preference number: 6 (lower is better)
Translates to: IGAKVIVWACGF*TWRFCSCRVCQ
Trigger: TTGGCAGACTCTACAGCTGCAGAACCTCCAAGTTCAGAACCCACAAGCCCAAACAATCACCTTAGCCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS GCA 72 bp ATATTAGGCATCACTCCAGGTAGTCCTGTCAGAACTTaGTGGTTCTGTAAGTTGGGAGCGGCAGCCACAACA +
Preference number: 6 (lower is better)
Translates to: ILGITPGSPVRT*WFCKLGAAATT
Trigger: TGTTGTGGCTGCCGCTCCCAACTTACAGAACCAGCAAGTTCTGACAGGACTACCTGGAGTGATGCCTAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS GCA 72 bp GAAGCCATTGCCACTGATATTAATGGACTGCAGATCTaGCACCTGCATGACGTTGATGCCACTGTTGGCAAG +
Preference number: 6 (lower is better)
Translates to: EAIATDINGLQI*HLHDVDATVGK
Trigger: CTTGCCAACAGTGGCATCAACGTCATGCAGGTGGCAGATCTGCAGTCCATTAATATCAGTGGCAATGGCTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CCA 72 bp CTTTTTCAATTTTCACCACAGCTGTCATTTCATCCATaGAGTGATCTTGGTCAGAGGGCGGACCAGGCAGGC +
Preference number: 6 (lower is better)
Translates to: LFQFSPQLSFHP*SDLGQRADQAG
Trigger: GCCTGCCTGGTCCGCCCTCTGACCAAGATCACTCCATGGATGAAATGACAGCTGTGGTGAAAATTGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426431.2
CDS TCA 72 bp ATAATCTGTTGGTTTGCACCTGGTATGATCTGTATTTaGCCAGAACCATCCTGCTGCACTTGGGCCCCAGTG +
Preference number: 6 (lower is better)
Translates to: IICWFAPGMICI*PEPSCCTWAPV
Trigger: CACTGGGGCCCAAGTGCAGCAGGATGGTTCTGGTCAAATACAGATCATACCAGGTGCAAACCAACAGATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS TCA 72 bp TTCCCATTCAGGGCCACTGGTACATTGGTCACATACTaGGTCTGTCCTGAGAGTACATTATTAGCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: FPFRATGTLVTY*VCPESTLLARP
Trigger: AGGCCTGGCTAATAATGTACTCTCAGGACAGACTCAGTATGTGACCAATGTACCAGTGGCCCTGAATGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000426431.2
CDS CAA 72 bp GCCTGCTGGAGTAGGTTTGGCATAGCAGCAATGATGTaGCCTCCACTTCCTCGATTTGTGATAATCTGTTGG +
Preference number: 6 (lower is better)
Translates to: ACWSRFGIAAMM*PPLPRFVIICW
Trigger: CCAACAGATTATCACAAATCGAGGAAGTGGAGGCAACATCATTGCTGCTATGCCAAACCTACTCCAGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS CCA 72 bp CTTTTTCAATTTTCACCACAGCTGTCATTTCATCCATaGAGTGATCTTGGTCGCTCATGGTGGCAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: LFQFSPQLSFHP*SDLGRSWWQLR
Trigger: CCTCAGCTGCCACCATGAGCGACCAAGATCACTCCATGGATGAAATGACAGCTGTGGTGAAAATTGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327443.9
ENST00000551969.5
CDS CCA 72 bp AAACTGCAGCTGTTGCCCATCAACGGTCTGGAACTGTaGGATTACTTGATACTGAATATTAGGCATCACTCC +
Preference number: 6 (lower is better)
Translates to: KLQLLPINGLEL*DYLILNIRHHS
Trigger: GGAGTGATGCCTAATATTCAGTATCAAGTAATCCCACAGTTCCAGACCGTTGATGGGCAACAGCTGCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
ENST00000551969.5
CDS GCA 72 bp GCCTCCACTTCCTCGATTTGTGATAATCTGTTGGTTTaGACCTGGTATGATCTGTATTTGACCAGAACCATC +
Preference number: 6 (lower is better)
Translates to: ASTSSICDNLLV*TWYDLYLTRTI
Trigger: GATGGTTCTGGTCAAATACAGATCATACCAGGTGCAAACCAACAGATTATCACAAATCGAGGAAGTGGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1
CDS CCA 72 bp ACTTCCTCGATTTGTGATAATCTGTTGGTTTGCACCTaGTATGATCTGTATTTGACCAGAACCATCCTGCTG +
Preference number: 6 (lower is better)
Translates to: TSSICDNLLVCT*YDLYLTRTILL
Trigger: CAGCAGGATGGTTCTGGTCAAATACAGATCATACCAGGTGCAAACCAACAGATTATCACAAATCGAGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327443.9
ENST00000426431.2
ENST00000548560.1