RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SOX8 (Homo sapiens)

Ensembl gene IDs: ENSG00000005513

Ensembl transcript IDs: ENST00000293894.4, ENST00000566034.1

Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCGGACAGCCCGTGCAGCCGTTGTCGAGGGAATGTGGCCTTGAGTaGAGGGGCTCTCGGCGCCAAGACCGGCCTGGACCTCACAGCGCC +
Preference number: 1 (lower is better)
Translates to: PGQPVQPLSRECGLE*RGSRRQDRPGPHSA
Trigger: GGCGCTGTGAGGTCCAGGCCGGTCTTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACGGCTGCACGGGCTGTCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR TCA 90 bp GGATCCCGGACAGCCCGTGCAGCCGTTGTCGAGGGAATGTGGCCTTaGGTGCAGGGGCTCTCGGCGCCAAGACCGGCCTGGACCTCACAG +
Preference number: 1 (lower is better)
Translates to: GSRTARAAVVEGMWP*VQGLSAPRPAWTSQ
Trigger: CTGTGAGGTCCAGGCCGGTCTTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACGGCTGCACGGGCTGTCCGGGATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR TCA 90 bp GGTCCCTTCTCCTCCCTCGGGTTTTCGGTTGCCAAGCTCGAGGCATaGGGGGCCCAGTCCTCCCAGGGACCTTGGGACCTCCGGGCCCTC +
Preference number: 1 (lower is better)
Translates to: GPFSSLGFSVAKLEA*GAQSSQGPWDLRAL
Trigger: GAGGGCCCGGAGGTCCCAAGGTCCCTGGGAGGACTGGGCCCCTCATGCCTCGAGCTTGGCAACCGAAAACCCGAGGGAGGAGAAGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 90 bp TGGCCATCTGGAGGCCGAGGGCCACGGGCAGCAAGCGTGTTTCCCTaGAGACTTCAGCAGGCACTTGGAGCTCAGCCACTGGGGCCCCTC +
Preference number: 1 (lower is better)
Translates to: WPSGGRGPRAASVFP*RLQQALGAQPLGPL
Trigger: GAGGGGCCCCAGTGGCTGAGCTCCAAGTGCCTGCTGAAGTCTGCAGGGAAACACGCTTGCTGCCCGTGGCCCTCGGCCTCCAGATGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 90 bp CTCATCCCAGTCTGCGGACAGACACCCCGGATCCCGGACAGCCCGTaGAGCCGTTGTCGAGGGAATGTGGCCTTGAGTGCAGGGGCTCTC +
Preference number: 1 (lower is better)
Translates to: LIPVCGQTPRIPDSP*SRCRGNVALSAGAL
Trigger: GAGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACGGCTGCACGGGCTGTCCGGGATCCGGGGTGTCTGTCCGCAGACTGGGATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CCA 90 bp GCCACGGGCAGCAAGCGTGTTTCCCTGCAGACTTCAGCAGGCACTTaGAGCTCAGCCACTGGGGCCCCTCCCGCCCTGGTCACACACACT +
Preference number: 1 (lower is better)
Translates to: ATGSKRVSLQTSAGT*SSATGAPPALVTHT
Trigger: AGTGTGTGTGACCAGGGCGGGAGGGGCCCCAGTGGCTGAGCTCCAAGTGCCTGCTGAAGTCTGCAGGGAAACACGCTTGCTGCCCGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 90 bp CTGACAGGCAGGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTaGGGACAGACACCCCGGATCCCGGACAGCCCGTGCAGCCGTTGT +
Preference number: 1 (lower is better)
Translates to: LTGRSRRCSSRLIPV*GQTPRIPDSPCSRC
Trigger: ACAACGGCTGCACGGGCTGTCCGGGATCCGGGGTGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACCTGCCTGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 90 bp CCTGCAAGGCCCCTGCCACCCCCTCCTTTGGTCCTTGGGCTGTGCTaGCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTGGTGCC +
Preference number: 1 (lower is better)
Translates to: PARPLPPPPLVLGLC*RFSSTEMQSEGAGA
Trigger: GGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGCAGCACAGCCCAAGGACCAAAGGAGGGGGTGGCAGGGGCCTTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 90 bp CGCCCTGCAAGGCCCCTGCCACCCCCTCCTTTGGTCCTTGGGCTGTaGTGCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTGGT +
Preference number: 1 (lower is better)
Translates to: RPARPLPPPPLVLGL*CRFSSTEMQSEGAG
Trigger: ACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGCAGCACAGCCCAAGGACCAAAGGAGGGGGTGGCAGGGGCCTTGCAGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CCA 90 bp CTCACAGCGCCCTGCAAGGCCCCTGCCACCCCCTCCTTTGGTCCTTaGGCTGTGCTGCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGG +
Preference number: 1 (lower is better)
Translates to: LTAPCKAPATPSFGP*AVLPFLLYRDAKRR
Trigger: CCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGCAGCACAGCCCAAGGACCAAAGGAGGGGGTGGCAGGGGCCTTGCAGGGCGCTGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 90 bp TGGGCTGTGCTGCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTaGTGGTGCCGCCAGTCCTCACGGAAGAGGGACCAAACGGCAGCC +
Preference number: 1 (lower is better)
Translates to: WAVLPFLLYRDAKRR*WCRQSSRKRDQTAA
Trigger: GGCTGCCGTTTGGTCCCTCTTCCGTGAGGACTGGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGCAGCACAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CCA 90 bp GCTGTGCTGCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTaGTGCCGCCAGTCCTCACGGAAGAGGGACCAAACGGCAGCCCTT +
Preference number: 1 (lower is better)
Translates to: AVLPFLLYRDAKRRC*CRQSSRKRDQTAAL
Trigger: AAGGGCTGCCGTTTGGTCCCTCTTCCGTGAGGACTGGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGCAGCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 90 bp GTGCTGCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTGGTaGCGCCAGTCCTCACGGAAGAGGGACCAAACGGCAGCCCTTCTT +
Preference number: 1 (lower is better)
Translates to: VLPFLLYRDAKRRCW*RQSSRKRDQTAALL
Trigger: AAGAAGGGCTGCCGTTTGGTCCCTCTTCCGTGAGGACTGGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 90 bp TGCCAGCAAGGAGACACCTCAGATCTGACAGGCAGGTCCCGGAGATaGTCGAGTAGACTCATCCCAGTCTGCGGACAGACACCCCGGATC +
Preference number: 1 (lower is better)
Translates to: CQQGDTSDLTGRSRR*SSRLIPVCGQTPRI
Trigger: GATCCGGGGTGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACCTGCCTGTCAGATCTGAGGTGTCTCCTTGCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 90 bp AAGAGAGATGTGTTCATCACAGCCAGCCCTCGCGTGAGCGCACTCTaGCAGCAAGGAGACACCTCAGATCTGACAGGCAGGTCCCGGAGA +
Preference number: 1 (lower is better)
Translates to: KRDVFITASPRVSAL*QQGDTSDLTGRSRR
Trigger: TCTCCGGGACCTGCCTGTCAGATCTGAGGTGTCTCCTTGCTGGCAGAGTGCGCTCACGCGAGGGCTGGCTGTGATGAACACATCTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 90 bp GCAACGAGCAACGTGATGCCGGCCAACAGCTGCAACTCCACCTCCTaGCTGCCCTCAAGGGAAGCTTCCCAGCTTCCGTTTTGTCTTAAA +
Preference number: 1 (lower is better)
Translates to: ATSNVMPANSCNSTS*LPSREASQLPFCLK
Trigger: TTTAAGACAAAACGGAAGCTGGGAAGCTTCCCTTGAGGGCAGGCAGGAGGTGGAGTTGCAGCTGTTGGCCGGCATCACGTTGCTCGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CCA 90 bp ACGTTTAGTGGAGAAGGTTTAGTTTCACAGCTTGGTAGGTGGCACTaGTGCCTGCGAGCCAAGATCACTTCTGAAGCCACCACTTTCCAG +
Preference number: 1 (lower is better)
Translates to: TFSGEGLVSQLGRWH*CLRAKITSEATTFQ
Trigger: CTGGAAAGTGGTGGCTTCAGAAGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAACTAAACCTTCTCCACTAAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR TCA 90 bp GCTATTGTATGCTCTATGCTCAGCACACAGGGGAAGCAGTGCAGGTaGATCAGGTATGACTCGTCTAGAACTGAGGCCCTAACGACGTTT +
Preference number: 1 (lower is better)
Translates to: AIVCSMLSTQGKQCR*IRYDSSRTEALTTF
Trigger: AAACGTCGTTAGGGCCTCAGTTCTAGACGAGTCATACCTGATTCACCTGCACTGCTTCCCCTGTGTGCTGAGCATAGAGCATACAATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 90 bp TTTAGTGGAGAAGGTTTAGTTTCACAGCTTGGTAGGTGGCACTGGTaGCTGCGAGCCAAGATCACTTCTGAAGCCACCACTTTCCAGGAA +
Preference number: 1 (lower is better)
Translates to: FSGEGLVSQLGRWHW*LRAKITSEATTFQE
Trigger: TTCCTGGAAAGTGGTGGCTTCAGAAGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAACTAAACCTTCTCCACTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR TCA 90 bp CGTTGTCGAGGGAATGTGGCCTTGAGTGCAGGGGCTCTCGGCGCCAAGACCGGCGACAAGGCTGCCCCCTaGCGCCTGCGAGTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: RCRGNVALSAGALGAKTGDKAAP*RLRVPP
Trigger: GGGAGGGACTCGCAGGCGTCAGGGGGCAGCCTTGTC...GCCGGTCTTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR GCA 90 bp CCTGCAAGGCCCCTGCCACCCCCTCCTTTGGTCCTTGGGCTGTGCTGCCGTTTCGGGCCGGGACAAGGCTaGCCCCTGACGCCTGCGAGT +
Preference number: 2 (lower is better)
Translates to: PARPLPPPPLVLGLCCRFGPGQG*PLTPAS
Trigger: ACTCGCAGGCGTCAGGGGGCAGCCTTGTCCCGGCCC...GAAACGGCAGCACAGCCCAAGGACCAAAGGAGGGGGTGGCAGGGGCCTTGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CAA 90 bp CGGATCCCGGACAGCCCGTGCAGCCGTTGTCGAGGGAATGTGGCCTaGAGTGCAGGGGCTCTCGGCGCCAAGACCGGCCTGGACCTCACA +
Preference number: 2 (lower is better)
Translates to: RIPDSPCSRCRGNVA*SAGALGAKTGLDLT
Trigger: TGTGAGGTCCAGGCCGGTCTTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACGGCTGCACGGGCTGTCCGGGATCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CAA 90 bp AGTCTGCGGACAGACACCCCGGATCCCGGACAGCCCGTGCAGCCGTaGTCGAGGGAATGTGGCCTTGAGTGCAGGGGCTCTCGGCGCCAA +
Preference number: 2 (lower is better)
Translates to: SLRTDTPDPGQPVQP*SRECGLECRGSRRQ
Trigger: TTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACGGCTGCACGGGCTGTCCGGGATCCGGGGTGTCTGTCCGCAGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR CCA 90 bp CCTGCAAGGCCCCTGCCACCCCCTCCTTTGGTCCTTGGGCTGTGCTGCCGTTTCCCTGGTCACACACACTaGGCCGGGACAAGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: PARPLPPPPLVLGLCCRFPGHTH*AGTRLP
Trigger: GGGCAGCCTTGTCCCGGCCCAGTGTGTGTGACCAGG...GAAACGGCAGCACAGCCCAAGGACCAAAGGAGGGGGTGGCAGGGGCCTTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR CCA 90 bp GGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTGCGGACAGACACCCCGGAGCGCCAAGACCGGCCTaGACCTCACAGCGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: GPGDARVDSSQSADRHPGAPRPA*TSQRPA
Trigger: TGCAGGGCGCTGTGAGGTCCAGGCCGGTCTTGGCGC...TCCGGGGTGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CAA 90 bp CCTCACAGCGCCCTGCAAGGCCCCTGCCACCCCCTCCTTTGGTCCTaGGGCTGTGCTGCCGTTTCTCCTCTACCGAGATGCAAAGCGAAG +
Preference number: 2 (lower is better)
Translates to: PHSALQGPCHPLLWS*GCAAVSPLPRCKAK
Trigger: CTTCGCTTTGCATCTCGGTAGAGGAGAAACGGCAGCACAGCCCAAGGACCAAAGGAGGGGGTGGCAGGGGCCTTGCAGGGCGCTGTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR GCA 90 bp GTCCCTTCTCCTCCCTCGGGTTTTCGGTTGCCAAGCTCGAGGCATGAGGGGCCCATGCCGGCCAACAGCTaGAACTCCACCTCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: VPSPPSGFRLPSSRHEGPMPANS*NSTSCL
Trigger: CAGGCAGGAGGTGGAGTTGCAGCTGTTGGCCGGCAT...GGGCCCCTCATGCCTCGAGCTTGGCAACCGAAAACCCGAGGGAGGAGAAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR CCA 90 bp CAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCACGAAGGGAGAGGGAGCTaGTCCGTCGTCGGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: QGRSPASQTPNWYWVLGHEGRGS*SVVGRG
Trigger: ACCTCTGCCGACGACGGACCAGCTCCCTCTCCCTTC...GTGCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR CCA 90 bp CAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCACGCAAAGCGAAGGTGCTaGTGCCGCCAGTCCTCACGG +
Preference number: 2 (lower is better)
Translates to: QGRSPASQTPNWYWVLGHAKRRC*CRQSSR
Trigger: CCGTGAGGACTGGCGGCACCAGCACCTTCGCTTTGC...GTGCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR CCA 90 bp CCTCCGAACGCGGTGCCAAGGGAGACGCTGCATGAAACGGGTCTGCGACGGCTCCCCTCCTTTGGTCCTTaGGCTGTGCTGCCGTTTCTC +
Preference number: 2 (lower is better)
Translates to: PPNAVPRETLHETGLRRLPSFGP*AVLPFL
Trigger: GAGAAACGGCAGCACAGCCCAAGGACCAAAGGAGGG...GAGCCGTCGCAGACCCGTTTCATGCAGCGTCTCCCTTGGCACCGCGTTCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR GCA 90 bp CAGCAGGGGAGTGAGGGTGCGTCCTCCGAACGCGGTGCCAAGGGAGACGCTGCAGCAAGCGTGTTTCCCTaGAGACTTCAGCAGGCACTT +
Preference number: 2 (lower is better)
Translates to: QQGSEGASSERGAKGDAAASVFP*RLQQAL
Trigger: AAGTGCCTGCTGAAGTCTGCAGGGAAACACGCTTGC...TGCAGCGTCTCCCTTGGCACCGCGTTCGGAGGACGCACCCTCACTCCCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR GCA 90 bp GGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTGCGGACAGACACCCCGGAGAATGTGGCCTTGAGTaGAGGGGCTCTCGGCGCCAA +
Preference number: 2 (lower is better)
Translates to: GPGDARVDSSQSADRHPGECGLE*RGSRRQ
Trigger: TTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTC...TCCGGGGTGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR CCA 90 bp CGCGTGAGCGCACTCTGCCAGCAAGGAGACACCTCAGATCTGACAGGCAGGTCCACTTCAGCAGGCACTTaGAGCTCAGCCACTGGGGCC +
Preference number: 2 (lower is better)
Translates to: RVSALCQQGDTSDLTGRSTSAGT*SSATGA
Trigger: GGCCCCAGTGGCTGAGCTCCAAGTGCCTGCTGAAGT...GGACCTGCCTGTCAGATCTGAGGTGTCTCCTTGCTGGCAGAGTGCGCTCACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR GCA 90 bp GACAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCGGCAGGTCCCGGAGATaGTCGAGTAGACTCATCCCA +
Preference number: 2 (lower is better)
Translates to: DRDGVLLPKPQTGTGCWGGRSRR*SSRLIP
Trigger: TGGGATGAGTCTACTCGAGCATCTCCGGGACCTGCC...GCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR GCA 90 bp GACAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCTTGGTCCTTGGGCTGTaGTGCCGTTTCTCCTCTACC +
Preference number: 2 (lower is better)
Translates to: DRDGVLLPKPQTGTGCWGLVLGL*CRFSST
Trigger: GGTAGAGGAGAAACGGCAGCACAGCCCAAGGACCAA...GCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR TCA 90 bp GCCTGCGAGCCAAGATCACTTCTGAAGCCACCACTTTCCAGGAATTCCTGTGTCGAGGGAATGTGGCCTTaGGTGCAGGGGCTCTCGGCG +
Preference number: 2 (lower is better)
Translates to: ACEPRSLLKPPLSRNSCVEGMWP*VQGLSA
Trigger: CGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTC...GACACAGGAATTCCTGGAAAGTGGTGGCTTCAGAAGTGATCTTGGCTCGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR GCA 90 bp AATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAAGGCAGCACTGCCCCCTGACGCCTaGGAGTCCCTCCCCGCGGCT +
Preference number: 2 (lower is better)
Translates to: NRSVQKLALLGQKGVKAALPPDA*ESLPAA
Trigger: AGCCGCGGGGAGGGACTCGCAGGCGTCAGGGGGCAG...TGCTGCCTTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR GCA 90 bp GTTTCACAGCTTGGTAGGTGGCACTGGTGCCTGCGAGCCAAGATCACTTCTGAAATCCCGGACAGCCCGTaGAGCCGTTGTCGAGGGAAT +
Preference number: 2 (lower is better)
Translates to: VSQLGRWHWCLRAKITSEIPDSP*SRCRGN
Trigger: ATTCCCTCGACAACGGCTGCACGGGCTGTCCGGGAT...TTCAGAAGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR CCA 90 bp CTGTGCTGCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTGGTGCCGCCGGCAGCCCTTCTTTGTaGAATAATCCCACCACCTCA +
Preference number: 2 (lower is better)
Translates to: LCCRFSSTEMQSEGAGAAGSPSL*NNPTTS
Trigger: TGAGGTGGTGGGATTATTCCACAAAGAAGGGCTGCC...GGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGCAGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR GCA 90 bp GGTTTAGTTTCACAGCTTGGTAGGTGGCACTGGTGCCTGCGAGCCAAGATCACTCCTCGGGTTTTCGGTTaGCAAGCTCGAGGCATGAGG +
Preference number: 2 (lower is better)
Translates to: GLVSQLGRWHWCLRAKITPRVFG*QARGMR
Trigger: CCTCATGCCTCGAGCTTGGCAACCGAAAACCCGAGG...AGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAACTAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR CCA 90 bp GACCAAACGGCAGCCCTTCTTTGTGGAATAATCCCACCACCTCAAAAAGAAAGAAGAGGTGTGGCCATCTaGAGGCCGAGGGCCACGGGC +
Preference number: 2 (lower is better)
Translates to: DQTAALLCGIIPPPQKERRGVAI*RPRATG
Trigger: GCCCGTGGCCCTCGGCCTCCAGATGGCCACACCTCT...TCTTTCTTTTTGAGGTGGTGGGATTATTCCACAAAGAAGGGCTGCCGTTTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR TCA 90 bp TTAGTTTCACAGCTTGGTAGGTGGCACTGGTGCCTGCGAGCCAAGATCACTTCTTGGGGCACCCCAACCTaGTCAGAGATGTCACAAGGC +
Preference number: 2 (lower is better)
Translates to: LVSQLGRWHWCLRAKITSWGTPT*SEMSQG
Trigger: GCCTTGTGACATCTCTGATCAGGTTGGGGTGCCCCA...AGAAGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR GCA 90 bp TTTATCAAATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAAGATGCAAAGCGAAGGTaGTGGTGCCGCCAGTCCTCA +
Preference number: 2 (lower is better)
Translates to: FIKSICTKVSVAWSERSEDAKRR*WCRQSS
Trigger: TGAGGACTGGCGGCACCAGCACCTTCGCTTTGCATC...TTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATTTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 72 bp CCCGCCCTGGTCACACACACTGGGCCGGGACAAGGCTaGCCCCTGACGCCTGCGAGTCCCTCCCCGCGGCTG +
Preference number: 3 (lower is better)
Translates to: PALVTHTGPGQG*PLTPASPSPRL
Trigger: CAGCCGCGGGGAGGGACTCGCAGGCGTCAGGGGGCAGCCTTGTCCCGGCCCAGTGTGTGTGACCAGGGCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR TCA 72 bp GCGTCCTCCGAACGCGGTGCCAAGGGAGACGCTGCATaGAACGGGTCTGCGACGGCTCCCGGCCCCCACCCC +
Preference number: 3 (lower is better)
Translates to: ASSERGAKGDAA*NGSATAPGPHP
Trigger: GGGGTGGGGGCCGGGAGCCGTCGCAGACCCGTTTCATGCAGCGTCTCCCTTGGCACCGCGTTCGGAGGACGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 72 bp GGGTGCGTCCTCCGAACGCGGTGCCAAGGGAGACGCTaGATGAAACGGGTCTGCGACGGCTCCCGGCCCCCA +
Preference number: 3 (lower is better)
Translates to: GCVLRTRCQGRR*MKRVCDGSRPP
Trigger: TGGGGGCCGGGAGCCGTCGCAGACCCGTTTCATGCAGCGTCTCCCTTGGCACCGCGTTCGGAGGACGCACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CCA 72 bp GGGAGCTGGTCCGTCGTCGGCAGAGGTGTGGCCATCTaGAGGCCGAGGGCCACGGGCAGCAAGCGTGTTTCC +
Preference number: 3 (lower is better)
Translates to: GSWSVVGRGVAI*RPRATGSKRVS
Trigger: GGAAACACGCTTGCTGCCCGTGGCCCTCGGCCTCCAGATGGCCACACCTCTGCCGACGACGGACCAGCTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR TCA 72 bp ACAGCCCGTGCAGCCGTTGTCGAGGGAATGTGGCCTTaGGTGCAGGGGCTCTCGGCGCCAAGACCGGCCTGG +
Preference number: 3 (lower is better)
Translates to: TARAAVVEGMWP*VQGLSAPRPAW
Trigger: CCAGGCCGGTCTTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACGGCTGCACGGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 72 bp CCCGTGCAGCCGTTGTCGAGGGAATGTGGCCTTGAGTaGAGGGGCTCTCGGCGCCAAGACCGGCCTGGACCT +
Preference number: 3 (lower is better)
Translates to: PVQPLSRECGLE*RGSRRQDRPGP
Trigger: AGGTCCAGGCCGGTCTTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACGGCTGCACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR CAA 90 bp CCTCCGAACGCGGTGCCAAGGGAGACGCTGCATGAAACGGGTCTGCGACGGCTCCAGCCCGTGCAGCCGTaGTCGAGGGAATGTGGCCTT +
Preference number: 3 (lower is better)
Translates to: PPNAVPRETLHETGLRRLQPVQP*SRECGL
Trigger: AAGGCCACATTCCCTCGACAACGGCTGCACGGGCTG...GAGCCGTCGCAGACCCGTTTCATGCAGCGTCTCCCTTGGCACCGCGTTCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR TCA 72 bp TCCTCCCTCGGGTTTTCGGTTGCCAAGCTCGAGGCATaGGGGGCCCAGTCCTCCCAGGGACCTTGGGACCTC +
Preference number: 3 (lower is better)
Translates to: SSLGFSVAKLEA*GAQSSQGPWDL
Trigger: GAGGTCCCAAGGTCCCTGGGAGGACTGGGCCCCTCATGCCTCGAGCTTGGCAACCGAAAACCCGAGGGAGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 72 bp GTCTGCGGACAGACACCCCGGATCCCGGACAGCCCGTaGAGCCGTTGTCGAGGGAATGTGGCCTTGAGTGCA +
Preference number: 3 (lower is better)
Translates to: VCGQTPRIPDSP*SRCRGNVALSA
Trigger: TGCACTCAAGGCCACATTCCCTCGACAACGGCTGCACGGGCTGTCCGGGATCCGGGGTGTCTGTCCGCAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 72 bp AGGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTaGGGACAGACACCCCGGATCCCGGACAGCCCGTGC +
Preference number: 3 (lower is better)
Translates to: RSRRCSSRLIPV*GQTPRIPDSPC
Trigger: GCACGGGCTGTCCGGGATCCGGGGTGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CCA 72 bp AGCAAGCGTGTTTCCCTGCAGACTTCAGCAGGCACTTaGAGCTCAGCCACTGGGGCCCCTCCCGCCCTGGTC +
Preference number: 3 (lower is better)
Translates to: SKRVSLQTSAGT*SSATGAPPALV
Trigger: GACCAGGGCGGGAGGGGCCCCAGTGGCTGAGCTCCAAGTGCCTGCTGAAGTCTGCAGGGAAACACGCTTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR CAA 90 bp GACAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCCTGCCACCCCCTCCTTaGGTCCTTGGGCTGTGCTGC +
Preference number: 3 (lower is better)
Translates to: DRDGVLLPKPQTGTGCWGLPPPP*VLGLCC
Trigger: GCAGCACAGCCCAAGGACCAAAGGAGGGGGTGGCAG...GCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 72 bp AGGCCCCTGCCACCCCCTCCTTTGGTCCTTGGGCTGTaGTGCCGTTTCTCCTCTACCGAGATGCAAAGCGAA +
Preference number: 3 (lower is better)
Translates to: RPLPPPPLVLGL*CRFSSTEMQSE
Trigger: TTCGCTTTGCATCTCGGTAGAGGAGAAACGGCAGCACAGCCCAAGGACCAAAGGAGGGGGTGGCAGGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 72 bp GTGTTCATCACAGCCAGCCCTCGCGTGAGCGCACTCTaGCAGCAAGGAGACACCTCAGATCTGACAGGCAGG +
Preference number: 3 (lower is better)
Translates to: VFITASPRVSAL*QQGDTSDLTGR
Trigger: CCTGCCTGTCAGATCTGAGGTGTCTCCTTGCTGGCAGAGTGCGCTCACGCGAGGGCTGGCTGTGATGAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 72 bp CTGCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTaGTGGTGCCGCCAGTCCTCACGGAAGAGGGACCAA +
Preference number: 3 (lower is better)
Translates to: LPFLLYRDAKRR*WCRQSSRKRDQ
Trigger: TTGGTCCCTCTTCCGTGAGGACTGGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 72 bp AACGTGATGCCGGCCAACAGCTGCAACTCCACCTCCTaGCTGCCCTCAAGGGAAGCTTCCCAGCTTCCGTTT +
Preference number: 3 (lower is better)
Translates to: NVMPANSCNSTS*LPSREASQLPF
Trigger: AAACGGAAGCTGGGAAGCTTCCCTTGAGGGCAGGCAGGAGGTGGAGTTGCAGCTGTTGGCCGGCATCACGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CCA 72 bp CCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTaGTGCCGCCAGTCCTCACGGAAGAGGGACCAAACG +
Preference number: 3 (lower is better)
Translates to: PFLLYRDAKRRC*CRQSSRKRDQT
Trigger: CGTTTGGTCCCTCTTCCGTGAGGACTGGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR CAA 90 bp CTGTGCTGCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTGGTGCCGCCAACGGCAGCCCTTCTTaGTGGAATAATCCCACCACC +
Preference number: 3 (lower is better)
Translates to: LCCRFSSTEMQSEGAGAANGSPS*WNNPTT
Trigger: GGTGGTGGGATTATTCCACAAAGAAGGGCTGCCGTT...GGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGCAGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 72 bp TTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTGGTaGCGCCAGTCCTCACGGAAGAGGGACCAAACGGCA +
Preference number: 3 (lower is better)
Translates to: FLLYRDAKRRCW*RQSSRKRDQTA
Trigger: TGCCGTTTGGTCCCTCTTCCGTGAGGACTGGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 72 bp GGAGACACCTCAGATCTGACAGGCAGGTCCCGGAGATaGTCGAGTAGACTCATCCCAGTCTGCGGACAGACA +
Preference number: 3 (lower is better)
Translates to: GDTSDLTGRSRR*SSRLIPVCGQT
Trigger: TGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACCTGCCTGTCAGATCTGAGGTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR TCA 72 bp AAAAGAGAGATGTGTTCATCACAGCCAGCCCTCGCGTaGGCGCACTCTGCCAGCAAGGAGACACCTCAGATC +
Preference number: 3 (lower is better)
Translates to: KREMCSSQPALA*AHSASKETPQI
Trigger: GATCTGAGGTGTCTCCTTGCTGGCAGAGTGCGCTCACGCGAGGGCTGGCTGTGATGAACACATCTCTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CCA 72 bp GGAGAAGGTTTAGTTTCACAGCTTGGTAGGTGGCACTaGTGCCTGCGAGCCAAGATCACTTCTGAAGCCACC +
Preference number: 3 (lower is better)
Translates to: GEGLVSQLGRWH*CLRAKITSEAT
Trigger: GGTGGCTTCAGAAGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAACTAAACCTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 72 bp GAAGGTTTAGTTTCACAGCTTGGTAGGTGGCACTGGTaGCTGCGAGCCAAGATCACTTCTGAAGCCACCACT +
Preference number: 3 (lower is better)
Translates to: EGLVSQLGRWHW*LRAKITSEATT
Trigger: AGTGGTGGCTTCAGAAGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAACTAAACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR GCA 72 bp AAAGGCACAAGTTTCCGTGAAGTAGGCGCTATTGTATaGTCTATGCTCAGCACACAGGGGAAGCAGTGCAGG +
Preference number: 3 (lower is better)
Translates to: KGTSFREVGAIV*SMLSTQGKQCR
Trigger: CCTGCACTGCTTCCCCTGTGTGCTGAGCATAGAGCATACAATAGCGCCTACTTCACGGAAACTTGTGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR-3UTR CAA 90 bp TTTATCAAATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAACGAGGGAATGTGGCCTaGAGTGCAGGGGCTCTCGGC +
Preference number: 3 (lower is better)
Translates to: FIKSICTKVSVAWSERSERGNVA*SAGALG
Trigger: GCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCG...TTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATTTGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CCA 72 bp TTTAGTGGAGAAGGTTTAGTTTCACAGCTTGGTAGGTaGCACTGGTGCCTGCGAGCCAAGATCACTTCTGAA +
Preference number: 3 (lower is better)
Translates to: FSGEGLVSQLGR*HWCLRAKITSE
Trigger: TTCAGAAGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAACTAAACCTTCTCCACTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp CCGTCGTCGGCAGAGGTGTGGCCATCTGGAGGCCGAGGGCCACGGGCAGCAAGCTTGGAGCTCAGCCACTaGGGCCCCTCCCGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PSSAEVWPSGGRGPRAASLELSH*GPSRPG
Trigger: ACCAGGGCGGGAGGGGCCCCAGTGGCTGAGCTCCAA...GCTTGCTGCCCGTGGCCCTCGGCCTCCAGATGGCCACACCTCTGCCGACGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp CCTCCGAACGCGGTGCCAAGGGAGACGCTGCATGAAACGGGTCTGCGACGGCTCGCCATAGTCGCCCTGTaGGCCGGCGAAGGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: PPNAVPRETLHETGLRRLAIVAL*AGEGAG
Trigger: GCCGGCCCCTTCGCCGGCTCACAGGGCGACTATGGC...GAGCCGTCGCAGACCCGTTTCATGCAGCGTCTCCCTTGGCACCGCGTTCGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp GACCTTGGGACCTCCGGGCCCTCCAGGGCGGCCTCCCATAAGCCGAGCAACGAGTGCTCCGTCTTGATGTaGGGCCGTGGGGGACCCGTC +
Preference number: 4 (lower is better)
Translates to: DLGTSGPSRAASHKPSNECSVLM*GRGGPV
Trigger: GACGGGTCCCCCACGGCCGCACATCAAGACGGAGCA...CTCGTTGCTCGGCTTATGGGAGGCCGCCCTGGAGGGCCCGGAGGTCCCAAGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GCAGAGGTGTGGCCATCTGGAGGCCGAGGGCCACGGGCAGCAAGCGTGTTTCCCCCTCCACGTGCGACATaGAGCTGGCGGTGCCGGACG +
Preference number: 4 (lower is better)
Translates to: AEVWPSGGRGPRAASVFPPPRAT*SWRCRT
Trigger: CGTCCGGCACCGCCAGCTCCATGTCGCACGTGGAGG...GGGAAACACGCTTGCTGCCCGTGGCCCTCGGCCTCCAGATGGCCACACCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp CAGCAGGGGAGTGAGGGTGCGTCCTCCGAACGCGGTGCCAAGGGAGACGCTGCAGCTTCAGCTCCGGCTTaGCGCCCGCCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QQGSEGASSERGAKGDAAASAPA*RPPAAA
Trigger: AGCTGCAGCAGGCGGGCGCCAAGCCGGAGCTGAAGC...TGCAGCGTCTCCCTTGGCACCGCGTTCGGAGGACGCACCCTCACTCCCCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp CAGCAGGGGAGTGAGGGTGCGTCCTCCGAACGCGGTGCCAAGGGAGACGCTGCACTTGATGTGCGGCCGTaGGGGACCCGTCTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: QQGSEGASSERGAKGDAALDVRP*GTRLGG
Trigger: CCCACCGAGACGGGTCCCCCACGGCCGCACATCAAG...TGCAGCGTCTCCCTTGGCACCGCGTTCGGAGGACGCACCCTCACTCCCCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GGACAGCCCGTGCAGCCGTTGTCGAGGGAATGTGGCCTTGAGTGCAGGGGCTCTCGGCCGGGGTGGCGCTaGACTGGCCGCTGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GQPVQPLSRECGLECRGSRPGWR*TGRCRN
Trigger: GTTCCTGCAGCGGCCAGTCCAGCGCCACCCCGGCCG...AGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACGGCTGCACGGGCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp GACCTTGGGACCTCCGGGCCCTCCAGGGCGGCCTCCCATAAGCCGAGCAACGAGTCCAGTCGTAGCCCTTaGGCACCTGCGACACGGCGT +
Preference number: 4 (lower is better)
Translates to: DLGTSGPSRAASHKPSNESSRSP*APATRR
Trigger: ACGCCGTGTCGCAGGTGCTCAAGGGCTACGACTGGA...CTCGTTGCTCGGCTTATGGGAGGCCGCCCTGGAGGGCCCGGAGGTCCCAAGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp CGTTGTCGAGGGAATGTGGCCTTGAGTGCAGGGGCTCTCGGCGCCAAGACCGGCTCGGCTGCTCCGTCTTaGTGTGCGGCCGTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RCRGNVALSAGALGAKTGSAAPS*CAAVGD
Trigger: GTCCCCCACGGCCGCACATCAAGACGGAGCAGCCGA...GCCGGTCTTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp CCTCCGAACGCGGTGCCAAGGGAGACGCTGCATGAAACGGGTCTGCGACGGCTCTTGGCGCCCGCCTGCTaGAGCTCCGTCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PPNAVPRETLHETGLRRLLAPAC*SSVLGV
Trigger: CACCCCCAAGACGGAGCTGCAGCAGGCGGGCGCCAA...GAGCCGTCGCAGACCCGTTTCATGCAGCGTCTCCCTTGGCACCGCGTTCGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp CCGTCGTCGGCAGAGGTGTGGCCATCTGGAGGCCGAGGGCCACGGGCAGCAAGCGTGTGGTCGCCATGGTaGTGCCCATCTCCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PSSAEVWPSGGRGPRAASVWSPW*CPSPSP
Trigger: AGGGCTTGGAGATGGGCACCACCATGGCGACCACAC...GCTTGCTGCCCGTGGCCCTCGGCCTCCAGATGGCCACACCTCTGCCGACGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CAA 72 bp GACAGCCCGTGCAGCCGTTGTCGAGGGAATGTGGCCTaGAGTGCAGGGGCTCTCGGCGCCAAGACCGGCCTG +
Preference number: 4 (lower is better)
Translates to: DSPCSRCRGNVA*SAGALGAKTGL
Trigger: CAGGCCGGTCTTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACGGCTGCACGGGCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp GACAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCGACAAGGCTGCCCCCTaGCGCCTGCGAGTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: DRDGVLLPKPQTGTGCWGDKAAP*RLRVPP
Trigger: GGGAGGGACTCGCAGGCGTCAGGGGGCAGCCTTGTC...GCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp CGTTGTCGAGGGAATGTGGCCTTGAGTGCAGGGGCTCTCGGCGCCAAGACCGGCAAGGCAGCAGGGGAGTaGGGGTGCGTCCTCCGAACG +
Preference number: 4 (lower is better)
Translates to: RCRGNVALSAGALGAKTGKAAGE*GCVLRT
Trigger: CGTTCGGAGGACGCACCCTCACTCCCCTGCTGCCTT...GCCGGTCTTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp GCAGAGGTGTGGCCATCTGGAGGCCGAGGGCCACGGGCAGCAAGCGTGTTTCCCTCCGAGTCCTCCACGTaGGACATGGAGCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: AEVWPSGGRGPRAASVFPSESST*DMELAV
Trigger: CACCGCCAGCTCCATGTCGCACGTGGAGGACTCGGA...GGGAAACACGCTTGCTGCCCGTGGCCCTCGGCCTCCAGATGGCCACACCTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp GGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTGCGGACAGACACCCCGGAGGCTTGGCGCCCGCCTaGTGCAGCTCCGTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GPGDARVDSSQSADRHPGGLAPA*CSSVLG
Trigger: CCCCAAGACGGAGCTGCAGCAGGCGGGCGCCAAGCC...TCCGGGGTGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp GACAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCGACCTCACAGCGCCCTaGAAGGCCCCTGCCACCCCC +
Preference number: 4 (lower is better)
Translates to: DRDGVLLPKPQTGTGCWGDLTAP*KAPATP
Trigger: GGGGGTGGCAGGGGCCTTGCAGGGCGCTGTGAGGTC...GCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GACAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCGACGGGGCACTCTTGTaGGCCCACACGGGGGACGCC +
Preference number: 4 (lower is better)
Translates to: DRDGVLLPKPQTGTGCWGDGALL*AHTGDA
Trigger: GGCGTCCCCCGTGTGGGCCCACAAGAGTGCCCCGTC...GCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp CCGTCGTCGGCAGAGGTGTGGCCATCTGGAGGCCGAGGGCCACGGGCAGCAAGCCTTGGTAGGTGGCACTaGTGCCTGCGAGCCAAGATC +
Preference number: 4 (lower is better)
Translates to: PSSAEVWPSGGRGPRAASLGRWH*CLRAKI
Trigger: GATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAG...GCTTGCTGCCCGTGGCCCTCGGCCTCCAGATGGCCACACCTCTGCCGACGACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GACAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCCGCTGTGGCCGGCTTTaGCGCTCTTCCTGCGCCGTG +
Preference number: 4 (lower is better)
Translates to: DRDGVLLPKPQTGTGCWGRCGRL*RSSCAV
Trigger: CACGGCGCAGGAAGAGCGCCAAAGCCGGCCACAGCG...GCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp CAGCAGGGGAGTGAGGGTGCGTCCTCCGAACGCGGTGCCAAGGGAGACGCTGCACCTGTGTGGTCGCCATaGTGGTGCCCATCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: QQGSEGASSERGAKGDAAPVWSP*WCPSPS
Trigger: GCTTGGAGATGGGCACCACCATGGCGACCACACAGG...TGCAGCGTCTCCCTTGGCACCGCGTTCGGAGGACGCACCCTCACTCCCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp CCACGGGCAGCAAGCGTGTTTCCCTGCAGACTTCAGCAGGCACTTGGAGCTCAGGCTGGTCCCAGTGACTaGTGGGGCTGTGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: PRAASVFPCRLQQALGAQAGPSD*WGCGRA
Trigger: CGCCCGCCCACAGCCCCACCAGTCACTGGGACCAGC...CTGAGCTCCAAGTGCCTGCTGAAGTCTGCAGGGAAACACGCTTGCTGCCCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GTCCCTTCTCCTCCCTCGGGTTTTCGGTTGCCAAGCTCGAGGCATGAGGGGCCCAGGGCCTGGTCAGGGTaGTGTACACCGGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: VPSPPSGFRLPSSRHEGPRAWSG*CTPAGP
Trigger: GGGACCAGCCGGTGTACACCACCCTGACCAGGCCCT...GGGCCCCTCATGCCTCGAGCTTGGCAACCGAAAACCCGAGGGAGGAGAAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp CCTGCAAGGCCCCTGCCACCCCCTCCTTTGGTCCTTGGGCTGTGCTGCCGTTTCGAAGGGAGAGGGAGCTaGTCCGTCGTCGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PARPLPPPPLVLGLCCRFEGRGS*SVVGRG
Trigger: ACCTCTGCCGACGACGGACCAGCTCCCTCTCCCTTC...GAAACGGCAGCACAGCCCAAGGACCAAAGGAGGGGGTGGCAGGGGCCTTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp CCTCCGAACGCGGTGCCAAGGGAGACGCTGCATGAAACGGGTCTGCGACGGCTCGCAAAGCGAAGGTGCTaGTGCCGCCAGTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: PPNAVPRETLHETGLRRLAKRRC*CRQSSR
Trigger: CCGTGAGGACTGGCGGCACCAGCACCTTCGCTTTGC...GAGCCGTCGCAGACCCGTTTCATGCAGCGTCTCCCTTGGCACCGCGTTCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CAA 72 bp ACAGACACCCCGGATCCCGGACAGCCCGTGCAGCCGTaGTCGAGGGAATGTGGCCTTGAGTGCAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TDTPDPGQPVQP*SRECGLECRGS
Trigger: AGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACGGCTGCACGGGCTGTCCGGGATCCGGGGTGTCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp GCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTGGTGCCGCCAGTCCTCCAGCCAGCCCTCGCGTaGGCGCACTCTGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: AVSPLPRCKAKVLVPPVLQPALA*AHSASK
Trigger: CTTGCTGGCAGAGTGCGCTCACGCGAGGGCTGGCTG...GAGGACTGGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp CGTTGTCGAGGGAATGTGGCCTTGAGTGCAGGGGCTCTCGGCGCCAAGACCGGCATGGGCCGCTTCACATaGGGCTTGGCTTTGAGCGCG +
Preference number: 4 (lower is better)
Translates to: RCRGNVALSAGALGAKTGMGRFT*GLALSA
Trigger: CGCGCTCAAAGCCAAGCCGCATGTGAAGCGGCCCAT...GCCGGTCTTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp GGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTGCGGACAGACACCCCGGACTGGTAGAGGCCGGGTaGGTAGCCAGGGTAGGCACC +
Preference number: 4 (lower is better)
Translates to: GPGDARVDSSQSADRHPGLVEAG*VARVGT
Trigger: GGTGCCTACCCTGGCTACGCACCCGGCCTCTACCAG...TCCGGGGTGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp GCAGAGGTGTGGCCATCTGGAGGCCGAGGGCCACGGGCAGCAAGCGTGTTTCCCGTCCTTGGGCTGTGCTaGCGTTTCTCCTCTACCGAG +
Preference number: 4 (lower is better)
Translates to: AEVWPSGGRGPRAASVFPVLGLC*RFSSTE
Trigger: CTCGGTAGAGGAGAAACGGCAGCACAGCCCAAGGAC...GGGAAACACGCTTGCTGCCCGTGGCCCTCGGCCTCCAGATGGCCACACCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp CGTTGTCGAGGGAATGTGGCCTTGAGTGCAGGGGCTCTCGGCGCCAAGACCGGCATGCCGGCCAACAGCTaGAACTCCACCTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RCRGNVALSAGALGAKTGMPANS*NSTSCL
Trigger: CAGGCAGGAGGTGGAGTTGCAGCTGTTGGCCGGCAT...GCCGGTCTTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp CAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCACTGCATGAAACGGGTCTaGGACGGCTCCCGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: QGRSPASQTPNWYWVLGHCMKRV*DGSRPP
Trigger: TGGGGGCCGGGAGCCGTCGCAGACCCGTTTCATGCA...GTGCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp ACAGGCAGGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTGCGGACAGACACGTGCGACATGGAGCTaGCGGTGCCGGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TGRSRRCSSRLIPVCGQTRATWS*RCRTGC
Trigger: GCAGCCCGTCCGGCACCGCCAGCTCCATGTCGCACG...TGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACCTGCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp ACAGGCAGGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTGCGGACAGACAGGTCCCAGTGACTGGTaGGGCTGTGGGCGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: TGRSRRCSSRLIPVCGQTGPSDW*GCGRAA
Trigger: TGCCGCCCGCCCACAGCCCCACCAGTCACTGGGACC...TGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACCTGCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GACAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCTGGGCCCTCAGGGCCTaGTCAGGGTGGTGTACACCG +
Preference number: 4 (lower is better)
Translates to: DRDGVLLPKPQTGTGCWGWALRA*SGWCTP
Trigger: CGGTGTACACCACCCTGACCAGGCCCTGAGGGCCCA...GCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTGGTGCCGCCAGTCCTCTCCTCCCAGGGACCTTaGGACCTCCGGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AVSPLPRCKAKVLVPPVLSSQGP*DLRALQ
Trigger: CTGGAGGGCCCGGAGGTCCCAAGGTCCCTGGGAGGA...GAGGACTGGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp GTTTCACAGCTTGGTAGGTGGCACTGGTGCCTGCGAGCCAAGATCACTTCTGAAGCCGTTGAGCAGGGGTaGGGCGTAGGGCCGGCGCGG +
Preference number: 4 (lower is better)
Translates to: VSQLGRWHWCLRAKITSEAVEQG*GVGPAR
Trigger: CCGCGCCGGCCCTACGCCTCACCCCTGCTCAACGGC...TTCAGAAGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp GGACAGCCCGTGCAGCCGTTGTCGAGGGAATGTGGCCTTGAGTGCAGGGGCTCTAAGGGAGACGCTGCATaGAACGGGTCTGCGACGGCT +
Preference number: 4 (lower is better)
Translates to: GQPVQPLSRECGLECRGSKGDAA*NGSATA
Trigger: AGCCGTCGCAGACCCGTTTCATGCAGCGTCTCCCTT...AGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACGGCTGCACGGGCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp CCTCCGAACGCGGTGCCAAGGGAGACGCTGCATGAAACGGGTCTGCGACGGCTCGGTAGGTGGCACTGGTaGCTGCGAGCCAAGATCACT +
Preference number: 4 (lower is better)
Translates to: PPNAVPRETLHETGLRRLGRWHW*LRAKIT
Trigger: AGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACC...GAGCCGTCGCAGACCCGTTTCATGCAGCGTCTCCCTTGGCACCGCGTTCGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp CAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCACGAGTCGGAGTCGCTGTaGCCGGCTTTGGCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QGRSPASQTPNWYWVLGHESESL*PALALF
Trigger: GAAGAGCGCCAAAGCCGGCCACAGCGACTCCGACTC...GTGCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GACAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCTGGGTCTGCCCTGTGTaGTCGCCATGGTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: DRDGVLLPKPQTGTGCWGWVCPV*SPWWCP
Trigger: TGGGCACCACCATGGCGACCACACAGGGCAGACCCA...GCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp CAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCACCCCAGGGGCAGGTACTaGTCGAACTCGTGGACGTCG +
Preference number: 4 (lower is better)
Translates to: QGRSPASQTPNWYWVLGHPRGRY*SNSWTS
Trigger: CGACGTCCACGAGTTCGACCAGTACCTGCCCCTGGG...GTGCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp ACAGGCAGGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTGCGGACAGACAAGAGGTGTGGCCATCTaGAGGCCGAGGGCCACGGGC +
Preference number: 4 (lower is better)
Translates to: TGRSRRCSSRLIPVCGQTRGVAI*RPRATG
Trigger: GCCCGTGGCCCTCGGCCTCCAGATGGCCACACCTCT...TGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACCTGCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp CAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCACGAATGTGGCCTTGAGTaGAGGGGCTCTCGGCGCCAA +
Preference number: 4 (lower is better)
Translates to: QGRSPASQTPNWYWVLGHECGLE*RGSRRQ
Trigger: TTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTC...GTGCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp GGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTGCGGACAGACACCCCGGACGCGTGAGCGCACTCTaGCAGCAAGGAGACACCTCA +
Preference number: 4 (lower is better)
Translates to: GPGDARVDSSQSADRHPGRVSAL*QQGDTS
Trigger: TGAGGTGTCTCCTTGCTGGCAGAGTGCGCTCACGCG...TCCGGGGTGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp CCGTCGTCGGCAGAGGTGTGGCCATCTGGAGGCCGAGGGCCACGGGCAGCAAGCCTATTGTATGCTCTATaGTCAGCACACAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PSSAEVWPSGGRGPRAASLLYAL*SAHRGS
Trigger: GCTTCCCCTGTGTGCTGAGCATAGAGCATACAATAG...GCTTGCTGCCCGTGGCCCTCGGCCTCCAGATGGCCACACCTCTGCCGACGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GGTTTAGTTTCACAGCTTGGTAGGTGGCACTGGTGCCTGCGAGCCAAGATCACTGGGGTGGGCGGCCCGTaGGTCTGCCCTGTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: GLVSQLGRWHWCLRAKITGVGGP*VCPVWS
Trigger: CGACCACACAGGGCAGACCCACGGGCCGCCCACCCC...AGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAACTAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp CCACGGGCAGCAAGCGTGTTTCCCTGCAGACTTCAGCAGGCACTTGGAGCTCAGGAGCAACGAGCAACGTaGTGCCGGCCAACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PRAASVFPCRLQQALGAQEQRAT*CRPTAA
Trigger: TGCAGCTGTTGGCCGGCATCACGTTGCTCGTTGCTC...CTGAGCTCCAAGTGCCTGCTGAAGTCTGCAGGGAAACACGCTTGCTGCCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp GGTTTAGTTTCACAGCTTGGTAGGTGGCACTGGTGCCTGCGAGCCAAGATCACTACATGGAGCTGGCGGTaGCGGACGGGCTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GLVSQLGRWHWCLRAKITTWSWR*RTGCRA
Trigger: CGCCCTGCAGCCCGTCCGGCACCGCCAGCTCCATGT...AGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAACTAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp CAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCACCCCATCTCCAAGCCCTaGTTCAGCCTTGTACACGGC +
Preference number: 4 (lower is better)
Translates to: QGRSPASQTPNWYWVLGHPISKP*FSLVHG
Trigger: GCCGTGTACAAGGCTGAAGCAGGGCTTGGAGATGGG...GTGCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp CCTGCAAGGCCCCTGCCACCCCCTCCTTTGGTCCTTGGGCTGTGCTGCCGTTTCGCAAGCGTGTTTCCCTaGAGACTTCAGCAGGCACTT +
Preference number: 4 (lower is better)
Translates to: PARPLPPPPLVLGLCCRFASVFP*RLQQAL
Trigger: AAGTGCCTGCTGAAGTCTGCAGGGAAACACGCTTGC...GAAACGGCAGCACAGCCCAAGGACCAAAGGAGGGGGTGGCAGGGGCCTTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp CTGTGCTGCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTGGTGCCGCCAAGCGAAGGTGCTGGTaGCGCCAGTCCTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: LCCRFSSTEMQSEGAGAAKRRCW*RQSSRK
Trigger: CTTCCGTGAGGACTGGCGGCACCAGCACCTTCGCTT...GGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGCAGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp CCACGGGCAGCAAGCGTGTTTCCCTGCAGACTTCAGCAGGCACTTGGAGCTCAGACTCCACCTCCTGCCTaGCCTCAAGGGAAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PRAASVFPCRLQQALGAQTPPPA*PQGKLP
Trigger: GGGAAGCTTCCCTTGAGGGCAGGCAGGAGGTGGAGT...CTGAGCTCCAAGTGCCTGCTGAAGTCTGCAGGGAAACACGCTTGCTGCCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp GGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTGCGGACAGACACCCCGGATGCAACTCCACCTCCTaGCTGCCCTCAAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GPGDARVDSSQSADRHPGCNSTS*LPSREA
Trigger: AGCTTCCCTTGAGGGCAGGCAGGAGGTGGAGTTGCA...TCCGGGGTGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp ACAGGCAGGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTGCGGACAGACAGTCCTCCGAACGCGGTaGCAAGGGAGACGCTGCATG +
Preference number: 4 (lower is better)
Translates to: TGRSRRCSSRLIPVCGQTVLRTR*QGRRCM
Trigger: CATGCAGCGTCTCCCTTGGCACCGCGTTCGGAGGAC...TGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACCTGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp ACAGGCAGGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTGCGGACAGACACTGAAGTCGATGTTCTaGCGCCCGCTGTCCACCGGC +
Preference number: 4 (lower is better)
Translates to: TGRSRRCSSRLIPVCGQTLKSMF*RPLSTG
Trigger: GCCGGTGGACAGCGGGCGCCAGAACATCGACTTCAG...TGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACCTGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GTCCCTTCTCCTCCCTCGGGTTTTCGGTTGCCAAGCTCGAGGCATGAGGGGCCCTACTGGTCGAACTCGTaGACGTCGAAGGCGTCCATG +
Preference number: 4 (lower is better)
Translates to: VPSPPSGFRLPSSRHEGPYWSNS*TSKASM
Trigger: CATGGACGCCTTCGACGTCCACGAGTTCGACCAGTA...GGGCCCCTCATGCCTCGAGCTTGGCAACCGAAAACCCGAGGGAGGAGAAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTGCGGACAGACACCCCGGACCCTCCTTTGGTCCTTaGGCTGTGCTGCCGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GPGDARVDSSQSADRHPGPSFGP*AVLPFL
Trigger: GAGAAACGGCAGCACAGCCCAAGGACCAAAGGAGGG...TCCGGGGTGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp CCACGGGCAGCAAGCGTGTTTCCCTGCAGACTTCAGCAGGCACTTGGAGCTCAGTCACAGCTTGGTAGGTaGCACTGGTGCCTGCGAGCC +
Preference number: 4 (lower is better)
Translates to: PRAASVFPCRLQQALGAQSQLGR*HWCLRA
Trigger: GGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGA...CTGAGCTCCAAGTGCCTGCTGAAGTCTGCAGGGAAACACGCTTGCTGCCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp CAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCACAGATGTCCACGTTGCTaGAGTCGATGTTCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: QGRSPASQTPNWYWVLGHRCPRC*SRCSGA
Trigger: GGCGCCAGAACATCGACTTCAGCAACGTGGACATCT...GTGCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp GCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTGGTGCCGCCAGTCCTCGAGACACCTCAGATCTaGCAGGCAGGTCCCGGAGAT +
Preference number: 4 (lower is better)
Translates to: AVSPLPRCKAKVLVPPVLETPQI*QAGPGD
Trigger: ATCTCCGGGACCTGCCTGTCAGATCTGAGGTGTCTC...GAGGACTGGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp ACAGGCAGGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTGCGGACAGACATGGTCGCCATGGTGGTaGCCATCTCCAAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TGRSRRCSSRLIPVCGQTWSPWW*PSPSPA
Trigger: AGCAGGGCTTGGAGATGGGCACCACCATGGCGACCA...TGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACCTGCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp GGTTTAGTTTCACAGCTTGGTAGGTGGCACTGGTGCCTGCGAGCCAAGATCACTCGCTGGACTGGCCGCTaGAGGAACCGTAGTCGGGCG +
Preference number: 4 (lower is better)
Translates to: GLVSQLGRWHWCLRAKITRWTGR*RNRSRA
Trigger: CGCCCGACTACGGTTCCTGCAGCGGCCAGTCCAGCG...AGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAACTAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp TTAGTTTCACAGCTTGGTAGGTGGCACTGGTGCCTGCGAGCCAAGATCACTTCTGGGCCGGGACAAGGCTaGCCCCTGACGCCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: LVSQLGRWHWCLRAKITSGPGQG*PLTPAS
Trigger: ACTCGCAGGCGTCAGGGGGCAGCCTTGTCCCGGCCC...AGAAGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAACTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp GCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTGGTGCCGCCAGTCCTCGATGCAAAGCGAAGGTaGTGGTGCCGCCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: AVSPLPRCKAKVLVPPVLDAKRR*WCRQSS
Trigger: TGAGGACTGGCGGCACCAGCACCTTCGCTTTGCATC...GAGGACTGGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp CCACGGGCAGCAAGCGTGTTTCCCTGCAGACTTCAGCAGGCACTTGGAGCTCAGCCTCGGGTTTTCGGTTaGCAAGCTCGAGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: PRAASVFPCRLQQALGAQPRVFG*QARGMR
Trigger: CCTCATGCCTCGAGCTTGGCAACCGAAAACCCGAGG...CTGAGCTCCAAGTGCCTGCTGAAGTCTGCAGGGAAACACGCTTGCTGCCCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp CTGTGCTGCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTGGTGCCGCCGGTGGCACTGGTGCCTaGGAGCCAAGATCACTTCTG +
Preference number: 4 (lower is better)
Translates to: LCCRFSSTEMQSEGAGAAGGTGA*EPRSLL
Trigger: CAGAAGTGATCTTGGCTCGCAGGCACCAGTGCCACC...GGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGCAGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp GGTTTAGTTTCACAGCTTGGTAGGTGGCACTGGTGCCTGCGAGCCAAGATCACTGAGGGAATGTGGCCTTaGGTGCAGGGGCTCTCGGCG +
Preference number: 4 (lower is better)
Translates to: GLVSQLGRWHWCLRAKITEGMWP*VQGLSA
Trigger: CGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTC...AGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAACTAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp GGTCCCGGAGATGCTCGAGTAGACTCATCCCAGTCTGCGGACAGACACCCCGGAGGGAAGCAGTGCAGGTaGATCAGGTATGACTCGTCT +
Preference number: 4 (lower is better)
Translates to: GPGDARVDSSQSADRHPGGKQCR*IRYDSS
Trigger: AGACGAGTCATACCTGATTCACCTGCACTGCTTCCC...TCCGGGGTGTCTGTCCGCAGACTGGGATGAGTCTACTCGAGCATCTCCGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp CTGTGCTGCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTGGTGCCGCCTTGGTCCTTGGGCTGTaGTGCCGTTTCTCCTCTACC +
Preference number: 4 (lower is better)
Translates to: LCCRFSSTEMQSEGAGAALVLGL*CRFSST
Trigger: GGTAGAGGAGAAACGGCAGCACAGCCCAAGGACCAA...GGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGCAGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GGTTTAGTTTCACAGCTTGGTAGGTGGCACTGGTGCCTGCGAGCCAAGATCACTCCTGGTCACACACACTaGGCCGGGACAAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GLVSQLGRWHWCLRAKITPGHTH*AGTRLP
Trigger: GGGCAGCCTTGTCCCGGCCCAGTGTGTGTGACCAGG...AGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAACTAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GGACAGCCCGTGCAGCCGTTGTCGAGGGAATGTGGCCTTGAGTGCAGGGGCTCTGGCAGCCCTTCTTTGTaGAATAATCCCACCACCTCA +
Preference number: 4 (lower is better)
Translates to: GQPVQPLSRECGLECRGSGSPSL*NNPTTS
Trigger: TGAGGTGGTGGGATTATTCCACAAAGAAGGGCTGCC...AGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACGGCTGCACGGGCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp AATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAAGGCAGCACATGCGGCTTGGCTTTaGGCGCGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NRSVQKLALLGQKGVKAAHAAWL*ARRRRR
Trigger: GCGGCGGCGGCGGCGCGCTCAAAGCCAAGCCGCATG...TGCTGCCTTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp AATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAAGGCAGCAGTCCCTCCCCGCGGCTaGGCCCTCAGGGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: NRSVQKLALLGQKGVKAAVPPRG*ALRAWS
Trigger: TGACCAGGCCCTGAGGGCCCAGCCGCGGGGAGGGAC...TGCTGCCTTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp GCCTGCGAGCCAAGATCACTTCTGAAGCCACCACTTTCCAGGAATTCCTGTGTCTGGGGCACCCCAACCTaGTCAGAGATGTCACAAGGC +
Preference number: 4 (lower is better)
Translates to: ACEPRSLLKPPLSRNSCVWGTPT*SEMSQG
Trigger: GCCTTGTGACATCTCTGATCAGGTTGGGGTGCCCCA...GACACAGGAATTCCTGGAAAGTGGTGGCTTCAGAAGTGATCTTGGCTCGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp CCACGGGCAGCAAGCGTGTTTCCCTGCAGACTTCAGCAGGCACTTGGAGCTCAGAGGCACAAGTTTCCGTaGAGTAGGCGCTATTGTATG +
Preference number: 4 (lower is better)
Translates to: PRAASVFPCRLQQALGAQRHKFP*SRRYCM
Trigger: CATACAATAGCGCCTACTTCACGGAAACTTGTGCCT...CTGAGCTCCAAGTGCCTGCTGAAGTCTGCAGGGAAACACGCTTGCTGCCCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp TTAGTTTCACAGCTTGGTAGGTGGCACTGGTGCCTGCGAGCCAAGATCACTTCTACTTCAGCAGGCACTTaGAGCTCAGCCACTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LVSQLGRWHWCLRAKITSTSAGT*SSATGA
Trigger: GGCCCCAGTGGCTGAGCTCCAAGTGCCTGCTGAAGT...AGAAGTGATCTTGGCTCGCAGGCACCAGTGCCACCTACCAAGCTGTGAAACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GCCGTTTCTCCTCTACCGAGATGCAAAGCGAAGGTGCTGGTGCCGCCAGTCCTCAAAGTTAGCGTTGCTTaGTCAGAAAGGAGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: AVSPLPRCKAKVLVPPVLKVSVA*SERSEG
Trigger: GCCTTCACTCCTTTCTGACCAAGCAACGCTAACTTT...GAGGACTGGCGGCACCAGCACCTTCGCTTTGCATCTCGGTAGAGGAGAAACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp TTTATCAAATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAACTGCCCCCTGACGCCTaGGAGTCCCTCCCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: FIKSICTKVSVAWSERSELPPDA*ESLPAA
Trigger: AGCCGCGGGGAGGGACTCGCAGGCGTCAGGGGGCAG...TTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATTTGATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp GACCAAACGGCAGCCCTTCTTTGTGGAATAATCCCACCACCTCAAAAAGAAAGAGGCAGGTCCCGGAGATaGTCGAGTAGACTCATCCCA +
Preference number: 4 (lower is better)
Translates to: DQTAALLCGIIPPPQKERGRSRR*SSRLIP
Trigger: TGGGATGAGTCTACTCGAGCATCTCCGGGACCTGCC...TCTTTCTTTTTGAGGTGGTGGGATTATTCCACAAAGAAGGGCTGCCGTTTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp GACCAAACGGCAGCCCTTCTTTGTGGAATAATCCCACCACCTCAAAAAGAAAGATCCCAAACCCCAAACTaGTACTGGGTGCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: DQTAALLCGIIPPPQKERSQTPN*YWVLGH
Trigger: GTGCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGA...TCTTTCTTTTTGAGGTGGTGGGATTATTCCACAAAGAAGGGCTGCCGTTTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp TTTATCAAATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAAACACGGCGTCGCGGATaGAGGCCGGGAAGCGCTCGT +
Preference number: 4 (lower is better)
Translates to: FIKSICTKVSVAWSERSETRRRG*RPGSAR
Trigger: ACGAGCGCTTCCCGGCCTGCATCCGCGACGCCGTGT...TTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATTTGATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp AATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAAGGCAGCACTTTGGCGCTCTTCCTaGGCCGTGGCTGGTACTTGT +
Preference number: 4 (lower is better)
Translates to: NRSVQKLALLGQKGVKAALWRSS*AVAGTC
Trigger: ACAAGTACCAGCCACGGCGCAGGAAGAGCGCCAAAG...TGCTGCCTTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp AATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAAGGCAGCATGCCAAGGGAGACGCTaGATGAAACGGGTCTGCGAC +
Preference number: 4 (lower is better)
Translates to: NRSVQKLALLGQKGVKAACQGRR*MKRVCD
Trigger: GTCGCAGACCCGTTTCATGCAGCGTCTCCCTTGGCA...TGCTGCCTTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
3UTR CAA 72 bp GTCCTCACGGAAGAGGGACCAAACGGCAGCCCTTCTTaGTGGAATAATCCCACCACCTCAAAAAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: VLTEEGPNGSPS*WNNPTTSKRKI
Trigger: TATCTTTCTTTTTGAGGTGGTGGGATTATTCCACAAAGAAGGGCTGCCGTTTGGTCCCTCTTCCGTGAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CCA 90 bp TTTATCAAATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAAAGGCACCATAGTAGCTaGAGGCCTGCAGGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: FIKSICTKVSVAWSERSERHHSS*RPAGRH
Trigger: ATGGCGACCTGCAGGCCTCCAGCTACTATGGTGCCT...TTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATTTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR TCA 90 bp TTTATCAAATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAAAGCCAAGATCACTTCTaGAGCCACCACTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: FIKSICTKVSVAWSERSESQDHF*SHHFPG
Trigger: TCCTGGAAAGTGGTGGCTTCAGAAGTGATCTTGGCT...TTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATTTGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR GCA 90 bp TTTATCAAATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAAGTAGGCGCTATTGTATaGTCTATGCTCAGCACACAG +
Preference number: 4 (lower is better)
Translates to: FIKSICTKVSVAWSERSEVGAIV*SMLSTQ
Trigger: CTGTGTGCTGAGCATAGAGCATACAATAGCGCCTAC...TTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATTTGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS CCA 90 bp CCCGCCCTGACACCCGCCCGGGGTGCAGAGCCCGGAGCCTGCGTGTaGCCACCACCTCCGCGAGCTCTGCGCCCTCCAGGCCCCCGCTCG +
Preference number: 5 (lower is better)
Translates to: PALTPARGAEPGACV*PPPPRALRPPGPRS
Trigger: CGAGCGGGGGCCTGGAGGGCGCAGAGCTCGCGGAGGTGGTGGCCACACGCAGGCTCCGGGCTCTGCACCCCGGGCGGGTGTCAGGGCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS TCA 90 bp CCCAGTGACTGGTGGGGCTGTGGGCGGGCGGCAGGGCCAGGCCGTTaGGCAGGGGTGAGGCGTAGGGCCGGCGCGGCGAGTGGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: PSDWWGCGRAAGPGR*AGVRRRAGAASGSR
Trigger: CCTGCTTCCACTCGCCGCGCCGGCCCTACGCCTCACCCCTGCTCAACGGCCTGGCCCTGCCGCCCGCCCACAGCCCCACCAGTCACTGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS TCA 90 bp CTCCCGCCCTGGTCACACACACTGGGCCGGGACAAGGCTGCCCCCTaGCGCCTGCGAGTCCCTCCCCGCGGCTGGGCCCTCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LPPWSHTLGRDKAAP*RLRVPPRGWALRAW
Trigger: CCAGGCCCTGAGGGCCCAGCCGCGGGGAGGGACTCGCAGGCGTCAGGGGGCAGCCTTGTCCCGGCCCAGTGTGTGTGACCAGGGCGGGAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS GCA 90 bp CTGGCTCCAGAGCGCACCCGCCACGAGGGTGCACACCCCAGGCGCTaGCCTCCGCGGATCCCGACTCCCATAGCTGGCGCCGGACCCCGG +
Preference number: 5 (lower is better)
Translates to: LAPERTRHEGAHPRR*PPRIPTPIAGAGPR
Trigger: CCGGGGTCCGGCGCCAGCTATGGGAGTCGGGATCCGCGGAGGGCAGCGCCTGGGGTGTGCACCCTCGTGGCGGGTGCGCTCTGGAGCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 90 bp GCGCGTCCGAGTCCGAGTCCTCCACGTGCGACATGGAGCTGGCGGTaGCGGACGGGCTGCAGGGCGGCTGGGAGCGGGCCTCGCTCATGT +
Preference number: 5 (lower is better)
Translates to: ARPSPSPPRATWSWR*RTGCRAAGSGPRSC
Trigger: ACATGAGCGAGGCCCGCTCCCAGCCGCCCTGCAGCCCGTCCGGCACCGCCAGCTCCATGTCGCACGTGGAGGACTCGGACTCGGACGCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS CCA 90 bp CTGCGAGTCCCTCCCCGCGGCTGGGCCCTCAGGGCCTGGTCAGGGTaGTGTACACCGGCTGGTCCCAGTGACTGGTGGGGCTGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: LRVPPRGWALRAWSG*CTPAGPSDWWGCGR
Trigger: CCGCCCACAGCCCCACCAGTCACTGGGACCAGCCGGTGTACACCACCCTGACCAGGCCCTGAGGGCCCAGCCGCGGGGAGGGACTCGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS CCA 90 bp GAGCCGCATGCAACTTGCTGTCGTGCCGGGCGTGCCTCCCGGGGCTaGGGCCACTCGCAACGGCTGGAGGGCACGTCGGGGTGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: EPHATCCRAGRASRG*GHSQRLEGTSGCQP
Trigger: TGGCTGGCACCCCGACGTGCCCTCCAGCCGTTGCGAGTGGCCCCAGCCCCGGGAGGCACGCCCGGCACGACAGCAAGTTGCATGCGGCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS-3UTR CAA 90 bp CCGTCGTCGGCAGAGGTGTGGCCATCTGGAGGCCGAGGGCCACGGGCAGCAAGCGCCGACGGGGCACTCTaGTGGGCCCACACGGGGGAC +
Preference number: 5 (lower is better)
Translates to: PSSAEVWPSGGRGPRAASADGAL*WAHTGD
Trigger: GTCCCCCGTGTGGGCCCACAAGAGTGCCCCGTCGGC...GCTTGCTGCCCGTGGCCCTCGGCCTCCAGATGGCCACACCTCTGCCGACGACGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS GCA 90 bp CGAGGCTTCCCGGGAACGGTGCCGGCCTTCGGCGGGCAGCTGGGCTaGTGTCCCTCCATTCCCAGACACCCAGAAGCCCTGGCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: RGFPGTVPAFGGQLG*CPSIPRHPEALAGP
Trigger: GGGCCCTGCCAGGGCTTCTGGGTGTCTGGGAATGGAGGGACAGCAGCCCAGCTGCCCGCCGAAGGCCGGCACCGTTCCCGGGAAGCCTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 90 bp GGTGCCAGCCATGGCCCTCCGCAGGGTGTTCCCCGCCAGGAGAACTaGCTCCAGAGCGCACCCGCCACGAGGGTGCACACCCCAGGCGCT +
Preference number: 5 (lower is better)
Translates to: GASHGPPQGVPRQEN*LQSAPATRVHTPGA
Trigger: AGCGCCTGGGGTGTGCACCCTCGTGGCGGGTGCGCTCTGGAGCCAGTTCTCCTGGCGGGGAACACCCTGCGGAGGGCCATGGCTGGCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS-3UTR CAA 90 bp CCGTCGTCGGCAGAGGTGTGGCCATCTGGAGGCCGAGGGCCACGGGCAGCAAGCGTCCTCCCAGGGACCTaGGGACCTCCGGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: PSSAEVWPSGGRGPRAASVLPGT*GPPGPP
Trigger: TGGAGGGCCCGGAGGTCCCAAGGTCCCTGGGAGGAC...GCTTGCTGCCCGTGGCCCTCGGCCTCCAGATGGCCACACCTCTGCCGACGACGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS GCA 90 bp TTCCCCGCCAGGAGAACTGGCTCCAGAGCGCACCCGCCACGAGGGTaGACACCCCAGGCGCTGCCCTCCGCGGATCCCGACTCCCATAGC +
Preference number: 5 (lower is better)
Translates to: FPARRTGSRAHPPRG*TPQALPSADPDSHS
Trigger: GCTATGGGAGTCGGGATCCGCGGAGGGCAGCGCCTGGGGTGTGCACCCTCGTGGCGGGTGCGCTCTGGAGCCAGTTCTCCTGGCGGGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 90 bp GAGCACCTCCAGAGAGCCGCATGCAACTTGCTGTCGTGCCGGGCGTaGCTCCCGGGGCTGGGGCCACTCGCAACGGCTGGAGGGCACGTC +
Preference number: 5 (lower is better)
Translates to: EHLQRAACNLLSCRA*LPGLGPLATAGGHV
Trigger: GACGTGCCCTCCAGCCGTTGCGAGTGGCCCCAGCCCCGGGAGGCACGCCCGGCACGACAGCAAGTTGCATGCGGCTCTCTGGAGGTGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 90 bp AGAGGCCGGGGCCAGGAGGCTCTGACCAGGGAAACCCGCCTGCCGTaGGCTCCGGAGCCTCCCGTGGCACCAGGCAGTACACTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: RGRGQEALTRETRLP*APEPPVAPGSTLLW
Trigger: CCAGAGGAGTGTACTGCCTGGTGCCACGGGAGGCTCCGGAGCGCACGGCAGGCGGGTTTCCCTGGTCAGAGCCTCCTGGCCCCGGCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 90 bp TCTCCAAGCCCTGCTTCAGCCTTGTACACGGCACCGCCGCCAGGGTaGGGTCCCAGCTCCGCGCCCGAGTCGGAGTCGCTGTGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: SPSPASALYTAPPPG*GPSSAPESESLWPA
Trigger: AGCCGGCCACAGCGACTCCGACTCGGGCGCGGAGCTGGGACCCCACCCTGGCGGCGGTGCCGTGTACAAGGCTGAAGCAGGGCTTGGAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS GCA 90 bp AGGACCCAGCCGGCGGTGGACAAAAGCGAGGCTTCCCGGGAACGGTaGCGGCCTTCGGCGGGCAGCTGGGCTGCTGTCCCTCCATTCCCA +
Preference number: 5 (lower is better)
Translates to: RTQPAVDKSEASRER*RPSAGSWAAVPPFP
Trigger: TGGGAATGGAGGGACAGCAGCCCAGCTGCCCGCCGAAGGCCGGCACCGTTCCCGGGAAGCCTCGCTTTTGTCCACCGCCGGCTGGGTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 90 bp CTAAGGAGGGAGCACCTCCAGAGAGCCGCATGCAACTTGCTGTCGTaGCGGGCGTGCCTCCCGGGGCTGGGGCCACTCGCAACGGCTGGA +
Preference number: 5 (lower is better)
Translates to: LRREHLQRAACNLLS*RACLPGLGPLATAG
Trigger: TCCAGCCGTTGCGAGTGGCCCCAGCCCCGGGAGGCACGCCCGGCACGACAGCAAGTTGCATGCGGCTCTCTGGAGGTGCTCCCTCCTTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 90 bp GCGGGGAGGGTACTCGCAGGCAAACCTGCTGCCCACCCATCCGCCTaGCGCACTCCCTCCCCATGGGTGGTCCAGGAGCTAGAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: AGRVLAGKPAAHPSA*RTPSPWVVQELEEL
Trigger: CAGCTCCTCTAGCTCCTGGACCACCCATGGGGAGGGAGTGCGGCAGGCGGATGGGTGGGCAGCAGGTTTGCCTGCGAGTACCCTCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 90 bp GGTCTGCCCTGTGTGGTCGCCATGGTGGTGCCCATCTCCAAGCCCTaGTTCAGCCTTGTACACGGCACCGCCGCCAGGGTGGGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: GLPCVVAMVVPISKP*FSLVHGTAARVGSQ
Trigger: CTGGGACCCCACCCTGGCGGCGGTGCCGTGTACAAGGCTGAAGCAGGGCTTGGAGATGGGCACCACCATGGCGACCACACAGGGCAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS GCA 90 bp GGAGCTGAGCCCTTTCTAAGGAGGGAGCACCTCCAGAGAGCCGCATaGAACTTGCTGTCGTGCCGGGCGTGCCTCCCGGGGCTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: GAEPFLRREHLQRAA*NLLSCRACLPGLGP
Trigger: TGGCCCCAGCCCCGGGAGGCACGCCCGGCACGACAGCAAGTTGCATGCGGCTCTCTGGAGGTGCTCCCTCCTTAGAAAGGGCTCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 90 bp AGGCGTGCACACGGCGCACCCCGTCATCTCCACTCCTGCCCTCCCTaGTTCGGACCGAGGGTGTCCAGGAGAGGGAGAAACTGCGGGGAG +
Preference number: 5 (lower is better)
Translates to: RRAHGAPRHLHSCPP*FGPRVSRRGRNCGE
Trigger: CTCCCCGCAGTTTCTCCCTCTCCTGGACACCCTCGGTCCGAAGCAGGGAGGGCAGGAGTGGAGATGACGGGGTGCGCCGTGTGCACGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 90 bp AAAAGCGAGGCTTCCCGGGAACGGTGCCGGCCTTCGGCGGGCAGCTaGGCTGCTGTCCCTCCATTCCCAGACACCCAGAAGCCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: KSEASRERCRPSAGS*AAVPPFPDTQKPWQ
Trigger: CTGCCAGGGCTTCTGGGTGTCTGGGAATGGAGGGACAGCAGCCCAGCTGCCCGCCGAAGGCCGGCACCGTTCCCGGGAAGCCTCGCTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS-3UTR CAA 90 bp CCTGCAAGGCCCCTGCCACCCCCTCCTTTGGTCCTTGGGCTGTGCTGCCGTTTCTCGCTGTGGCCGGCTTaGGCGCTCTTCCTGCGCCGT +
Preference number: 5 (lower is better)
Translates to: PARPLPPPPLVLGLCCRFSLWPA*ALFLRR
Trigger: ACGGCGCAGGAAGAGCGCCAAAGCCGGCCACAGCGA...GAAACGGCAGCACAGCCCAAGGACCAAAGGAGGGGGTGGCAGGGGCCTTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS GCA 90 bp AGGAGAGGGAGAAACTGCGGGGAGGGTACTCGCAGGCAAACCTGCTaGCCACCCATCCGCCTGCCGCACTCCCTCCCCATGGGTGGTCCA +
Preference number: 5 (lower is better)
Translates to: RRGRNCGEGTRRQTC*PPIRLPHSLPMGGP
Trigger: TGGACCACCCATGGGGAGGGAGTGCGGCAGGCGGATGGGTGGGCAGCAGGTTTGCCTGCGAGTACCCTCCCCGCAGTTTCTCCCTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 90 bp TGCCCTCCCTGCTTCGGACCGAGGGTGTCCAGGAGAGGGAGAAACTaGGGGGAGGGTACTCGCAGGCAAACCTGCTGCCCACCCATCCGC +
Preference number: 5 (lower is better)
Translates to: CPPCFGPRVSRRGRN*GEGTRRQTCCPPIR
Trigger: GCGGATGGGTGGGCAGCAGGTTTGCCTGCGAGTACCCTCCCCGCAGTTTCTCCCTCTCCTGGACACCCTCGGTCCGAAGCAGGGAGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 90 bp ACCACGCCAAGGCGTGCACACGGCGCACCCCGTCATCTCCACTCCTaGCCTCCCTGCTTCGGACCGAGGGTGTCCAGGAGAGGGAGAAAC +
Preference number: 5 (lower is better)
Translates to: TTPRRAHGAPRHLHS*PPCFGPRVSRRGRN
Trigger: GTTTCTCCCTCTCCTGGACACCCTCGGTCCGAAGCAGGGAGGGCAGGAGTGGAGATGACGGGGTGCGCCGTGTGCACGCCTTGGCGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS-3UTR CAA 90 bp CCACGGGCAGCAAGCGTGTTTCCCTGCAGACTTCAGCAGGCACTTGGAGCTCAGACATGCGGCTTGGCTTaGAGCGCGCCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: PRAASVFPCRLQQALGAQTCGLA*SAPPPP
Trigger: CGGCGGCGGCGGCGCGCTCAAAGCCAAGCCGCATGT...CTGAGCTCCAAGTGCCTGCTGAAGTCTGCAGGGAAACACGCTTGCTGCCCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CAA 90 bp CGTTGTCGAGGGAATGTGGCCTTGAGTGCAGGGGCTCTCGGCGCCAAGACCGGCCGAGGGAATGTGGCCTaGAGTGCAGGGGCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: RCRGNVALSAGALGAKTGRGNVA*SAGALG
Trigger: GCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCG...GCCGGTCTTGGCGCCGAGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CAA 90 bp CAGCAGGGGAGTGAGGGTGCGTCCTCCGAACGCGGTGCCAAGGGAGACGCTGCACAGCCCGTGCAGCCGTaGTCGAGGGAATGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: QQGSEGASSERGAKGDAAQPVQP*SRECGL
Trigger: AAGGCCACATTCCCTCGACAACGGCTGCACGGGCTG...TGCAGCGTCTCCCTTGGCACCGCGTTCGGAGGACGCACCCTCACTCCCCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS CCA 90 bp ACTGGTAGAGGCCGGGTGCGTAGCCAGGGTAGGCACCATAGTAGCTaGAGGCCTGCAGGTCGCCATAGTCGCCCTGTGAGCCGGCGAAGG +
Preference number: 5 (lower is better)
Translates to: TGRGRVRSQGRHHSS*RPAGRHSRPVSRRR
Trigger: CCTTCGCCGGCTCACAGGGCGACTATGGCGACCTGCAGGCCTCCAGCTACTATGGTGCCTACCCTGGCTACGCACCCGGCCTCTACCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS CCA 90 bp CCGTGCGCTCCGGAGCCTCCCGTGGCACCAGGCAGTACACTCCTCTaGGAGAACCGGCCGGCGCCTGTTTGGGAAGGTTGGTATGCTTAC +
Preference number: 5 (lower is better)
Translates to: PCAPEPPVAPGSTLL*ENRPAPVWEGWYAY
Trigger: GTAAGCATACCAACCTTCCCAAACAGGCGCCGGCCGGTTCTCCCAGAGGAGTGTACTGCCTGGTGCCACGGGAGGCTCCGGAGCGCACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS-3UTR CAA 90 bp CAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCACCGCTTCACATGCGGCTaGGCTTTGAGCGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: QGRSPASQTPNWYWVLGHRFTCG*ALSAPP
Trigger: CGGCGGCGCGCTCAAAGCCAAGCCGCATGTGAAGCG...GTGCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CAA 90 bp GCCCTGGTCACACACACTGGGCCGGGACAAGGCTGCCCCCTGACGCCTGCGAGTTCCGAGATGTCCACGTaGCTGAAGTCGATGTTCTGG +
Preference number: 5 (lower is better)
Translates to: ALVTHTGPGQGCPLTPASSEMST*LKSMFW
Trigger: CCAGAACATCGACTTCAGCAACGTGGACATCTCGGA...ACTCGCAGGCGTCAGGGGGCAGCCTTGTCCCGGCCCAGTGTGTGTGACCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CAA 90 bp CGCGTGAGCGCACTCTGCCAGCAAGGAGACACCTCAGATCTGACAGGCAGGTCCCCCCTCCTTTGGTCCTaGGGCTGTGCTGCCGTTTCT +
Preference number: 5 (lower is better)
Translates to: RVSALCQQGDTSDLTGRSPLLWS*GCAAVS
Trigger: AGAAACGGCAGCACAGCCCAAGGACCAAAGGAGGGG...GGACCTGCCTGTCAGATCTGAGGTGTCTCCTTGCTGGCAGAGTGCGCTCACGCG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CAA 90 bp CAGGGACGGAGTCCTGCTTCCCAAACCCCAAACTGGTACTGGGTGCTGGGGCACCCCTCGGGTTTTCGGTaGCCAAGCTCGAGGCATGAG +
Preference number: 5 (lower is better)
Translates to: QGRSPASQTPNWYWVLGHPSGFR*PSSRHE
Trigger: CTCATGCCTCGAGCTTGGCAACCGAAAACCCGAGGG...GTGCCCCAGCACCCAGTACCAGTTTGGGGTTTGGGAAGCAGGACTCCGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CAA 90 bp GCCTGCGAGCCAAGATCACTTCTGAAGCCACCACTTTCCAGGAATTCCTGTGTCCTCGGCTGCTCCGTCTaGATGTGCGGCCGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: ACEPRSLLKPPLSRNSCVLGCSV*MCGRGG
Trigger: TCCCCCACGGCCGCACATCAAGACGGAGCAGCCGAG...GACACAGGAATTCCTGGAAAGTGGTGGCTTCAGAAGTGATCTTGGCTCGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS TCA 90 bp AGGAGCAGGATACGGGAACCAGAGCCCCAAACCAAGAGAACCATTTaGAACCCAACCAGAGGACACTCGGTGGGGGCGGCCTGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: RSRIREPEPQTKRTI*NPTRGHSVGAACPE
Trigger: CTCAGGACAGGCCGCCCCCACCGAGTGTCCTCTGGTTGGGTTTCAAATGGTTCTCTTGGTTTGGGGCTCTGGTTCCCGTATCCTGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 90 bp AGTACACTCCTCTGGGAGAACCGGCCGGCGCCTGTTTGGGAAGGTTaGTATGCTTACGACAGCCAAAGAAGAACAAGCCCCACGCCTCCC +
Preference number: 5 (lower is better)
Translates to: STLLWENRPAPVWEG*YAYDSQRRTSPTPP
Trigger: GGGAGGCGTGGGGCTTGTTCTTCTTTGGCTGTCGTAAGCATACCAACCTTCCCAAACAGGCGCCGGCCGGTTCTCCCAGAGGAGTGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 90 bp GCACCAGGCAGTACACTCCTCTGGGAGAACCGGCCGGCGCCTGTTTaGGAAGGTTGGTATGCTTACGACAGCCAAAGAAGAACAAGCCCC +
Preference number: 5 (lower is better)
Translates to: APGSTLLWENRPAPV*EGWYAYDSQRRTSP
Trigger: GGGGCTTGTTCTTCTTTGGCTGTCGTAAGCATACCAACCTTCCCAAACAGGCGCCGGCCGGTTCTCCCAGAGGAGTGTACTGCCTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS-3UTR CAA 90 bp CCACGGGCAGCAAGCGTGTTTCCCTGCAGACTTCAGCAGGCACTTGGAGCTCAGAACGGCAGCCCTTCTTaGTGGAATAATCCCACCACC +
Preference number: 5 (lower is better)
Translates to: PRAASVFPCRLQQALGAQNGSPS*WNNPTT
Trigger: GGTGGTGGGATTATTCCACAAAGAAGGGCTGCCGTT...CTGAGCTCCAAGTGCCTGCTGAAGTCTGCAGGGAAACACGCTTGCTGCCCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS TCA 90 bp GGCAGGAGGTGCAAATACGCAAGCTCCAAGCTCCCTTCTTCCAGGTaGGGAGCAGGATACGGGAACCAGAGCCCCAAACCAAGAGAACCA +
Preference number: 5 (lower is better)
Translates to: GRRCKYASSKLPSSR*GAGYGNQSPKPREP
Trigger: TGGTTCTCTTGGTTTGGGGCTCTGGTTCCCGTATCCTGCTCCTCACCTGGAAGAAGGGAGCTTGGAGCTTGCGTATTTGCACCTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS-3UTR CAA 90 bp GGACAGCCCGTGCAGCCGTTGTCGAGGGAATGTGGCCTTGAGTGCAGGGGCTCTGTACAAAAGTTAGCGTaGCTTGGTCAGAAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: GQPVQPLSRECGLECRGSVQKLA*LGQKGV
Trigger: CACTCCTTTCTGACCAAGCAACGCTAACTTTTGTAC...AGAGCCCCTGCACTCAAGGCCACATTCCCTCGACAACGGCTGCACGGGCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS CCA 90 bp CCCAAACCAAGAGAACCATTTGAAACCCAACCAGAGGACACTCGGTaGGGGCGGCCTGTCCTGAGCAACAAGTTCTTCACTCTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: PKPREPFETQPEDTR*GRPVLSNKFFTLQS
Trigger: GGACTGCAGAGTGAAGAACTTGTTGCTCAGGACAGGCCGCCCCCACCGAGTGTCCTCTGGTTGGGTTTCAAATGGTTCTCTTGGTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS-3UTR CAA 90 bp AATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAAGGCAGCAAGCCCTGCTTCAGCCTaGTACACGGCACCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: NRSVQKLALLGQKGVKAASPASA*YTAPPP
Trigger: TGGCGGCGGTGCCGTGTACAAGGCTGAAGCAGGGCT...TGCTGCCTTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS TCA 90 bp CATTTGAAACCCAACCAGAGGACACTCGGTGGGGGCGGCCTGTCCTaGGCAACAAGTTCTTCACTCTGCAGTCCTAATTTCTGGAAAACT +
Preference number: 5 (lower is better)
Translates to: HLKPNQRTLGGGGLS*ATSSSLCSPNFWKT
Trigger: AGTTTTCCAGAAATTAGGACTGCAGAGTGAAGAACTTGTTGCTCAGGACAGGCCGCCCCCACCGAGTGTCCTCTGGTTGGGTTTCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS-3UTR CAA 90 bp TTTATCAAATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAAAGCTTCAGCTCCGGCTaGGCGCCCGCCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: FIKSICTKVSVAWSERSESFSSG*APACCS
Trigger: GCTGCAGCAGGCGGGCGCCAAGCCGGAGCTGAAGCT...TTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATTTGATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS-3UTR CAA 90 bp TTTATCAAATCGATCTGTACAAAAGTTAGCGTTGCTTGGTCAGAAAGGAGTGAACTGCCACCCCCTCCTTaGGTCCTTGGGCTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: FIKSICTKVSVAWSERSELPPPP*VLGLCC
Trigger: GCAGCACAGCCCAAGGACCAAAGGAGGGGGTGGCAG...TTCACTCCTTTCTGACCAAGCAACGCTAACTTTTGTACAGATCGATTTGATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS GCA 72 bp GAGCGCACCCGCCACGAGGGTGCACACCCCAGGCGCTaGCCTCCGCGGATCCCGACTCCCATAGCTGGCGCC +
Preference number: 6 (lower is better)
Translates to: ERTRHEGAHPRR*PPRIPTPIAGA
Trigger: GGCGCCAGCTATGGGAGTCGGGATCCGCGGAGGGCAGCGCCTGGGGTGTGCACCCTCGTGGCGGGTGCGCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 72 bp CCACCGGCCGGCGTCCCTCCAGCTTCAGCTCCGGCTTaGCGCCCGCCTGCTGCAGCTCCGTCTTGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: PPAGVPPASAPA*RPPAAAPSWGW
Trigger: CCACCCCCAAGACGGAGCTGCAGCAGGCGGGCGCCAAGCCGGAGCTGAAGCTGGAGGGACGCCGGCCGGTGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS CCA 72 bp GCAACTTGCTGTCGTGCCGGGCGTGCCTCCCGGGGCTaGGGCCACTCGCAACGGCTGGAGGGCACGTCGGGG +
Preference number: 6 (lower is better)
Translates to: ATCCRAGRASRG*GHSQRLEGTSG
Trigger: CCCCGACGTGCCCTCCAGCCGTTGCGAGTGGCCCCAGCCCCGGGAGGCACGCCCGGCACGACAGCAAGTTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS TCA 72 bp TGGTCACACACACTGGGCCGGGACAAGGCTGCCCCCTaGCGCCTGCGAGTCCCTCCCCGCGGCTGGGCCCTC +
Preference number: 6 (lower is better)
Translates to: WSHTLGRDKAAP*RLRVPPRGWAL
Trigger: GAGGGCCCAGCCGCGGGGAGGGACTCGCAGGCGTCAGGGGGCAGCCTTGTCCCGGCCCAGTGTGTGTGACCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS GCA 72 bp AGTCCGAGTCCTCCACGTGCGACATGGAGCTGGCGGTaGCGGACGGGCTGCAGGGCGGCTGGGAGCGGGCCT +
Preference number: 6 (lower is better)
Translates to: SPSPPRATWSWR*RTGCRAAGSGP
Trigger: AGGCCCGCTCCCAGCCGCCCTGCAGCCCGTCCGGCACCGCCAGCTCCATGTCGCACGTGGAGGACTCGGACT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS GCA 72 bp GGAGACGGCGGCGCGTCCGAGTCCGAGTCCTCCACGTaGGACATGGAGCTGGCGGTGCCGGACGGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GDGGASESESST*DMELAVPDGLQ
Trigger: CTGCAGCCCGTCCGGCACCGCCAGCTCCATGTCGCACGTGGAGGACTCGGACTCGGACGCGCCGCCGTCTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293894.4
CDS CCA 72 bp TGGGGTCCCAGCTCCGCGCCCGAGTCGGAGTCGCTGTaGCCGGCTTTGGCGCTCTTCCTGCGCCGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: WGPSSAPESESL*PALALFLRRGW
Trigger: CCAGCCACGGCGCAGGAAGAGCGCCAAAGCCGGCCACAGCGACTCCGACTCGGGCGCGGAGCTGGGACCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS CCA 72 bp CCTCCCCGCGGCTGGGCCCTCAGGGCCTGGTCAGGGTaGTGTACACCGGCTGGTCCCAGTGACTGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: PPRGWALRAWSG*CTPAGPSDWWG
Trigger: GCCCCACCAGTCACTGGGACCAGCCGGTGTACACCACCCTGACCAGGCCCTGAGGGCCCAGCCGCGGGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS CAA 72 bp TCCACCGGCCGGCGTCCCTCCAGCTTCAGCTCCGGCTaGGCGCCCGCCTGCTGCAGCTCCGTCTTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: STGRRPSSFSSG*APACCSSVLGV
Trigger: CACCCCCAAGACGGAGCTGCAGCAGGCGGGCGCCAAGCCGGAGCTGAAGCTGGAGGGACGCCGGCCGGTGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS GCA 72 bp TTTTCCACTGGGACCCGCCCTGACACCCGCCCGGGGTaGAGAGCCCGGAGCCTGCGTGTGGCCACCACCTCC +
Preference number: 6 (lower is better)
Translates to: FSTGTRPDTRPG*RARSLRVATTS
Trigger: GGAGGTGGTGGCCACACGCAGGCTCCGGGCTCTGCACCCCGGGCGGGTGTCAGGGCGGGTCCCAGTGGAAAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 72 bp AGGAGAACTGGCTCCAGAGCGCACCCGCCACGAGGGTaGACACCCCAGGCGCTGCCCTCCGCGGATCCCGAC +
Preference number: 6 (lower is better)
Translates to: RRTGSRAHPPRG*TPQALPSADPD
Trigger: GTCGGGATCCGCGGAGGGCAGCGCCTGGGGTGTGCACCCTCGTGGCGGGTGCGCTCTGGAGCCAGTTCTCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 72 bp CCGGCGGTGGACAAAAGCGAGGCTTCCCGGGAACGGTaGCGGCCTTCGGCGGGCAGCTGGGCTGCTGTCCCT +
Preference number: 6 (lower is better)
Translates to: PAVDKSEASRER*RPSAGSWAAVP
Trigger: AGGGACAGCAGCCCAGCTGCCCGCCGAAGGCCGGCACCGTTCCCGGGAAGCCTCGCTTTTGTCCACCGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 72 bp CCTGCTTCAGCCTTGTACACGGCACCGCCGCCAGGGTaGGGTCCCAGCTCCGCGCCCGAGTCGGAGTCGCTG +
Preference number: 6 (lower is better)
Translates to: PASALYTAPPPG*GPSSAPESESL
Trigger: CAGCGACTCCGACTCGGGCGCGGAGCTGGGACCCCACCCTGGCGGCGGTGCCGTGTACAAGGCTGAAGCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS CCA 72 bp CTGCGAGTCCCTCCCCGCGGCTGGGCCCTCAGGGCCTaGTCAGGGTGGTGTACACCGGCTGGTCCCAGTGAC +
Preference number: 6 (lower is better)
Translates to: LRVPPRGWALRA*SGWCTPAGPSD
Trigger: GTCACTGGGACCAGCCGGTGTACACCACCCTGACCAGGCCCTGAGGGCCCAGCCGCGGGGAGGGACTCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS GCA 72 bp CAGAGAGCCGCATGCAACTTGCTGTCGTGCCGGGCGTaGCTCCCGGGGCTGGGGCCACTCGCAACGGCTGGA +
Preference number: 6 (lower is better)
Translates to: QRAACNLLSCRA*LPGLGPLATAG
Trigger: TCCAGCCGTTGCGAGTGGCCCCAGCCCCGGGAGGCACGCCCGGCACGACAGCAAGTTGCATGCGGCTCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 72 bp GAGCACCTCCAGAGAGCCGCATGCAACTTGCTGTCGTaGCGGGCGTGCCTCCCGGGGCTGGGGCCACTCGCA +
Preference number: 6 (lower is better)
Translates to: EHLQRAACNLLS*RACLPGLGPLA
Trigger: TGCGAGTGGCCCCAGCCCCGGGAGGCACGCCCGGCACGACAGCAAGTTGCATGCGGCTCTCTGGAGGTGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 72 bp CCGGGAACGGTGCCGGCCTTCGGCGGGCAGCTGGGCTaGTGTCCCTCCATTCCCAGACACCCAGAAGCCCTG +
Preference number: 6 (lower is better)
Translates to: PGTVPAFGGQLG*CPSIPRHPEAL
Trigger: CAGGGCTTCTGGGTGTCTGGGAATGGAGGGACAGCAGCCCAGCTGCCCGCCGAAGGCCGGCACCGTTCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 72 bp GGCCAGGAGGCTCTGACCAGGGAAACCCGCCTGCCGTaGGCTCCGGAGCCTCCCGTGGCACCAGGCAGTACA +
Preference number: 6 (lower is better)
Translates to: GQEALTRETRLP*APEPPVAPGST
Trigger: TGTACTGCCTGGTGCCACGGGAGGCTCCGGAGCGCACGGCAGGCGGGTTTCCCTGGTCAGAGCCTCCTGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 72 bp GGGAAACCCGCCTGCCGTGCGCTCCGGAGCCTCCCGTaGCACCAGGCAGTACACTCCTCTGGGAGAACCGGC +
Preference number: 6 (lower is better)
Translates to: GKPACRALRSLP*HQAVHSSGRTG
Trigger: GCCGGTTCTCCCAGAGGAGTGTACTGCCTGGTGCCACGGGAGGCTCCGGAGCGCACGGCAGGCGGGTTTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CAA 90 bp GTGTGGTCGCCATGGTGGTGCCCATCTCCAAGCCCTGCTTCAGCCTaGTACACGGCACCGCCGCCAGGGTGGGGTCCCAGCTCCGCGCCC +
Preference number: 6 (lower is better)
Translates to: VWSPWWCPSPSPASA*YTAPPPGWGPSSAP
Trigger: GGGCGCGGAGCTGGGACCCCACCCTGGCGGCGGTGCCGTGTACAAGGCTGAAGCAGGGCTTGGAGATGGGCACCACCATGGCGACCACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS GCA 72 bp GGGAGCAGGGGCCTGCCGTCCACAGCGCCCCGTGGCTaGGCCCTAGATCCAGACAGAAGGCAGGAGGTGCAA +
Preference number: 6 (lower is better)
Translates to: GSRGLPSTAPRG*ALDPDRRQEVQ
Trigger: TTGCACCTCCTGCCTTCTGTCTGGATCTAGGGCGCAGCCACGGGGCGCTGTGGACGGCAGGCCCCTGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 72 bp CAGGCGCTGCCCTCCGCGGATCCCGACTCCCATAGCTaGCGCCGGACCCCGGCTGGCCAGAGGATGTTTTTC +
Preference number: 6 (lower is better)
Translates to: QALPSADPDSHS*RRTPAGQRMFF
Trigger: GAAAAACATCCTCTGGCCAGCCGGGGTCCGGCGCCAGCTATGGGAGTCGGGATCCGCGGAGGGCAGCGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 72 bp GCTTCCCGGGAACGGTGCCGGCCTTCGGCGGGCAGCTaGGCTGCTGTCCCTCCATTCCCAGACACCCAGAAG +
Preference number: 6 (lower is better)
Translates to: ASRERCRPSAGS*AAVPPFPDTQK
Trigger: CTTCTGGGTGTCTGGGAATGGAGGGACAGCAGCCCAGCTGCCCGCCGAAGGCCGGCACCGTTCCCGGGAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CAA 72 bp CTAAGGAGGGAGCACCTCCAGAGAGCCGCATGCAACTaGCTGTCGTGCCGGGCGTGCCTCCCGGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LRREHLQRAACN*LSCRACLPGLG
Trigger: CCCCAGCCCCGGGAGGCACGCCCGGCACGACAGCAAGTTGCATGCGGCTCTCTGGAGGTGCTCCCTCCTTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CAA 90 bp GAGCCCTTTCTAAGGAGGGAGCACCTCCAGAGAGCCGCATGCAACTaGCTGTCGTGCCGGGCGTGCCTCCCGGGGCTGGGGCCACTCGCA +
Preference number: 6 (lower is better)
Translates to: EPFLRREHLQRAACN*LSCRACLPGLGPLA
Trigger: TGCGAGTGGCCCCAGCCCCGGGAGGCACGCCCGGCACGACAGCAAGTTGCATGCGGCTCTCTGGAGGTGCTCCCTCCTTAGAAAGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 72 bp AGGCGTGCACACGGCGCACCCCGTCATCTCCACTCCTaGCCTCCCTGCTTCGGACCGAGGGTGTCCAGGAGA +
Preference number: 6 (lower is better)
Translates to: RRAHGAPRHLHS*PPCFGPRVSRR
Trigger: TCTCCTGGACACCCTCGGTCCGAAGCAGGGAGGGCAGGAGTGGAGATGACGGGGTGCGCCGTGTGCACGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 72 bp GCTGCCCACCCATCCGCCTGCCGCACTCCCTCCCCATaGGTGGTCCAGGAGCTAGAGGAGCTGAGCCCTTTC +
Preference number: 6 (lower is better)
Translates to: AAHPSACRTPSP*VVQELEELSPF
Trigger: GAAAGGGCTCAGCTCCTCTAGCTCCTGGACCACCCATGGGGAGGGAGTGCGGCAGGCGGATGGGTGGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 72 bp CCGGAGCCTCCCGTGGCACCAGGCAGTACACTCCTCTaGGAGAACCGGCCGGCGCCTGTTTGGGAAGGTTGG +
Preference number: 6 (lower is better)
Translates to: PEPPVAPGSTLL*ENRPAPVWEGW
Trigger: CCAACCTTCCCAAACAGGCGCCGGCCGGTTCTCCCAGAGGAGTGTACTGCCTGGTGCCACGGGAGGCTCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CAA 72 bp CCATGGTGGTGCCCATCTCCAAGCCCTGCTTCAGCCTaGTACACGGCACCGCCGCCAGGGTGGGGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: PWWCPSPSPASA*YTAPPPGWGPS
Trigger: GCTGGGACCCCACCCTGGCGGCGGTGCCGTGTACAAGGCTGAAGCAGGGCTTGGAGATGGGCACCACCATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS GCA 72 bp CCCTTTCTAAGGAGGGAGCACCTCCAGAGAGCCGCATaGAACTTGCTGTCGTGCCGGGCGTGCCTCCCGGGG +
Preference number: 6 (lower is better)
Translates to: PFLRREHLQRAA*NLLSCRACLPG
Trigger: CCCCGGGAGGCACGCCCGGCACGACAGCAAGTTGCATGCGGCTCTCTGGAGGTGCTCCCTCCTTAGAAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 72 bp GTACTCGCAGGCAAACCTGCTGCCCACCCATCCGCCTaGCGCACTCCCTCCCCATGGGTGGTCCAGGAGCTA +
Preference number: 6 (lower is better)
Translates to: VLAGKPAAHPSA*RTPSPWVVQEL
Trigger: TAGCTCCTGGACCACCCATGGGGAGGGAGTGCGGCAGGCGGATGGGTGGGCAGCAGGTTTGCCTGCGAGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 72 bp AGAAACTGCGGGGAGGGTACTCGCAGGCAAACCTGCTaGCCACCCATCCGCCTGCCGCACTCCCTCCCCATG +
Preference number: 6 (lower is better)
Translates to: RNCGEGTRRQTC*PPIRLPHSLPM
Trigger: CATGGGGAGGGAGTGCGGCAGGCGGATGGGTGGGCAGCAGGTTTGCCTGCGAGTACCCTCCCCGCAGTTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS GCA 72 bp CACGGCGCACCCCGTCATCTCCACTCCTGCCCTCCCTaGTTCGGACCGAGGGTGTCCAGGAGAGGGAGAAAC +
Preference number: 6 (lower is better)
Translates to: HGAPRHLHSCPP*FGPRVSRRGRN
Trigger: GTTTCTCCCTCTCCTGGACACCCTCGGTCCGAAGCAGGGAGGGCAGGAGTGGAGATGACGGGGTGCGCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 72 bp GGCGGCCCGTGGGTCTGCCCTGTGTGGTCGCCATGGTaGTGCCCATCTCCAAGCCCTGCTTCAGCCTTGTAC +
Preference number: 6 (lower is better)
Translates to: GGPWVCPVWSPW*CPSPSPASALY
Trigger: GTACAAGGCTGAAGCAGGGCTTGGAGATGGGCACCACCATGGCGACCACACAGGGCAGACCCACGGGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS CCA 72 bp AGCTCCGAGATGTCCACGTTGCTGAAGTCGATGTTCTaGCGCCCGCTGTCCACCGGCCGGCGTCCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SSEMSTLLKSMF*RPLSTGRRPSS
Trigger: GCTGGAGGGACGCCGGCCGGTGGACAGCGGGCGCCAGAACATCGACTTCAGCAACGTGGACATCTCGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS CCA 72 bp GGCCGGGTGCGTAGCCAGGGTAGGCACCATAGTAGCTaGAGGCCTGCAGGTCGCCATAGTCGCCCTGTGAGC +
Preference number: 6 (lower is better)
Translates to: GRVRSQGRHHSS*RPAGRHSRPVS
Trigger: GCTCACAGGGCGACTATGGCGACCTGCAGGCCTCCAGCTACTATGGTGCCTACCCTGGCTACGCACCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS GCA 72 bp TGTGTGGTCGCCATGGTGGTGCCCATCTCCAAGCCCTaGTTCAGCCTTGTACACGGCACCGCCGCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: CVVAMVVPISKP*FSLVHGTAARV
Trigger: CACCCTGGCGGCGGTGCCGTGTACAAGGCTGAAGCAGGGCTTGGAGATGGGCACCACCATGGCGACCACACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS GCA 72 bp GGCCCGTGGGTCTGCCCTGTGTGGTCGCCATGGTGGTaGCCATCTCCAAGCCCTGCTTCAGCCTTGTACACG +
Preference number: 6 (lower is better)
Translates to: GPWVCPVWSPWW*PSPSPASALYT
Trigger: CGTGTACAAGGCTGAAGCAGGGCTTGGAGATGGGCACCACCATGGCGACCACACAGGGCAGACCCACGGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293894.4
ENST00000566034.1
CDS CAA 72 bp AGGCGCCCGTCCTCACTGAGCCACAGGACACACTCCTaGGGACTCTTCCCGAGGCTCACCTCCAACCGCCTG +
Preference number: 6 (lower is better)
Translates to: RRPSSLSHRTHS*GLFPRLTSNRL
Trigger: CAGGCGGTTGGAGGTGAGCCTCGGGAAGAGTCCCAAGGAGTGTGTCCTGTGGCTCAGTGAGGACGGGCGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CAA 90 bp CAGTACACTCCTCTGGGAGAACCGGCCGGCGCCTGTTTGGGAAGGTaGGTATGCTTACGACAGCCAAAGAAGAACAAGCCCCACGCCTCC +
Preference number: 6 (lower is better)
Translates to: QYTPLGEPAGACLGR*VCLRQPKKNKPHAS
Trigger: GGAGGCGTGGGGCTTGTTCTTCTTTGGCTGTCGTAAGCATACCAACCTTCCCAAACAGGCGCCGGCCGGTTCTCCCAGAGGAGTGTACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CAA 90 bp GGCACCAGGCAGTACACTCCTCTGGGAGAACCGGCCGGCGCCTGTTaGGGAAGGTTGGTATGCTTACGACAGCCAAAGAAGAACAAGCCC +
Preference number: 6 (lower is better)
Translates to: GTRQYTPLGEPAGAC*GRLVCLRQPKKNKP
Trigger: GGGCTTGTTCTTCTTTGGCTGTCGTAAGCATACCAACCTTCCCAAACAGGCGCCGGCCGGTTCTCCCAGAGGAGTGTACTGCCTGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 72 bp CTCTGGGAGAACCGGCCGGCGCCTGTTTGGGAAGGTTaGTATGCTTACGACAGCCAAAGAAGAACAAGCCCC +
Preference number: 6 (lower is better)
Translates to: LWENRPAPVWEG*YAYDSQRRTSP
Trigger: GGGGCTTGTTCTTCTTTGGCTGTCGTAAGCATACCAACCTTCCCAAACAGGCGCCGGCCGGTTCTCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CAA 72 bp GATACGGGAACCAGAGCCCCAAACCAAGAGAACCATTaGAAACCCAACCAGAGGACACTCGGTGGGGGCGGC +
Preference number: 6 (lower is better)
Translates to: DTGTRAPNQENH*KPNQRTLGGGG
Trigger: GCCGCCCCCACCGAGTGTCCTCTGGTTGGGTTTCAAATGGTTCTCTTGGTTTGGGGCTCTGGTTCCCGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CAA 72 bp CCTCTGGGAGAACCGGCCGGCGCCTGTTTGGGAAGGTaGGTATGCTTACGACAGCCAAAGAAGAACAAGCCC +
Preference number: 6 (lower is better)
Translates to: PLGEPAGACLGR*VCLRQPKKNKP
Trigger: GGGCTTGTTCTTCTTTGGCTGTCGTAAGCATACCAACCTTCCCAAACAGGCGCCGGCCGGTTCTCCCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS TCA 72 bp CCCAACCAGAGGACACTCGGTGGGGGCGGCCTGTCCTaGGCAACAAGTTCTTCACTCTGCAGTCCTAATTTC +
Preference number: 6 (lower is better)
Translates to: PNQRTLGGGGLS*ATSSSLCSPNF
Trigger: GAAATTAGGACTGCAGAGTGAAGAACTTGTTGCTCAGGACAGGCCGCCCCCACCGAGTGTCCTCTGGTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CAA 72 bp CAGTACACTCCTCTGGGAGAACCGGCCGGCGCCTGTTaGGGAAGGTTGGTATGCTTACGACAGCCAAAGAAG +
Preference number: 6 (lower is better)
Translates to: QYTPLGEPAGAC*GRLVCLRQPKK
Trigger: CTTCTTTGGCTGTCGTAAGCATACCAACCTTCCCAAACAGGCGCCGGCCGGTTCTCCCAGAGGAGTGTACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS TCA 72 bp TGCAAATACGCAAGCTCCAAGCTCCCTTCTTCCAGGTaGGGAGCAGGATACGGGAACCAGAGCCCCAAACCA +
Preference number: 6 (lower is better)
Translates to: CKYASSKLPSSR*GAGYGNQSPKP
Trigger: TGGTTTGGGGCTCTGGTTCCCGTATCCTGCTCCTCACCTGGAAGAAGGGAGCTTGGAGCTTGCGTATTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 72 bp AGTACACTCCTCTGGGAGAACCGGCCGGCGCCTGTTTaGGAAGGTTGGTATGCTTACGACAGCCAAAGAAGA +
Preference number: 6 (lower is better)
Translates to: STLLWENRPAPV*EGWYAYDSQRR
Trigger: TCTTCTTTGGCTGTCGTAAGCATACCAACCTTCCCAAACAGGCGCCGGCCGGTTCTCCCAGAGGAGTGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566034.1
CDS CCA 72 bp AGAGAACCATTTGAAACCCAACCAGAGGACACTCGGTaGGGGCGGCCTGTCCTGAGCAACAAGTTCTTCACT +
Preference number: 6 (lower is better)
Translates to: REPFETQPEDTR*GRPVLSNKFFT
Trigger: AGTGAAGAACTTGTTGCTCAGGACAGGCCGCCCCCACCGAGTGTCCTCTGGTTGGGTTTCAAATGGTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566034.1