RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SOX6 (Homo sapiens)

Ensembl gene IDs: ENSG00000110693

Ensembl transcript IDs: ENST00000316399.10, ENST00000396356.7, ENST00000524520.5, ENST00000524650.1, ENST00000525259.1, ENST00000525835.5, ENST00000526673.1, ENST00000527619.6, ENST00000527840.1, ENST00000528252.5, ENST00000528429.5, ENST00000529469.1, ENST00000530378.5, ENST00000531297.1, ENST00000533411.5, ENST00000533658.5, ENST00000533870.1, ENST00000655819.1, ENST00000683767.1

Found 1204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTaGCAGTCACCACTGTTGAACCTTGCTGCTGAATGGAATTCAGGG +
Preference number: 1 (lower is better)
Translates to: PTSLGLQVWPQDSPA*QSPLLNLAAEWNSG
Trigger: CCCTGAATTCCATTCAGCAGCAAGGTTCAACAGTGGTGACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 90 bp TTCACTGAGATTCCTGCATGGCCCACGAGCCTTGGGCTTCAGGTTTaGCCGCAGGACTCTCCTGCCTGGCAGTCACCACTGTTGAACCTT +
Preference number: 1 (lower is better)
Translates to: FTEIPAWPTSLGLQV*PQDSPAWQSPLLNL
Trigger: AAGGTTCAACAGTGGTGACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCCATGCAGGAATCTCAGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 90 bp AGTGTAAAGGTGCCAGCCCATGACAGCTTCACTGAGATTCCTGCATaGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCT +
Preference number: 1 (lower is better)
Translates to: SVKVPAHDSFTEIPA*PTSLGLQVWPQDSP
Trigger: AGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCCATGCAGGAATCTCAGTGAAGCTGTCATGGGCTGGCACCTTTACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 90 bp AGAGGTGGTCTCAGGCAGAGAAGACCACTCTGTCGATATCTGGTGTaGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTG +
Preference number: 1 (lower is better)
Translates to: RGGLRQRRPLCRYLV*RLLWCVYVIPHHAL
Trigger: CAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCACACCAGATATCGACAGAGTGGTCTTCTCTGCCTGAGACCACCTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 90 bp GACTCTCCTGCCTGGCAGTCACCACTGTTGAACCTTGCTGCTGAATaGAATTCAGGGGGAAATGCCACTGATGCAGACCCTACCACTTGT +
Preference number: 1 (lower is better)
Translates to: DSPAWQSPLLNLAAE*NSGGNATDADPTTC
Trigger: ACAAGTGGTAGGGTCTGCATCAGTGGCATTTCCCCCTGAATTCCATTCAGCAGCAAGGTTCAACAGTGGTGACTGCCAGGCAGGAGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 90 bp TGTGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTaGTGGCACGTCAACAGGCAAACACAATTGGGTCCATGCACTGTG +
Preference number: 1 (lower is better)
Translates to: CGGCSGVCMSYHITH*WHVNRQTQLGPCTV
Trigger: CACAGTGCATGGACCCAATTGTGTTTGCCTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 90 bp AGGCAGAGAAGACCACTCTGTCGATATCTGGTGTGGCGGTTGCTCTaGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAA +
Preference number: 1 (lower is better)
Translates to: RQRRPLCRYLVWRLL*CVYVIPHHALMARQ
Trigger: TTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCACACCAGATATCGACAGAGTGGTCTTCTCTGCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 90 bp CCATTCCTATGTCCTGGTGATCAGATTCTGGGTTGTCCCATGAGGTaGACTATCCCATTCACTGACATTCTCCCACTAAACCTCTCTGGG +
Preference number: 1 (lower is better)
Translates to: PFLCPGDQILGCPMR*TIPFTDILPLNLSG
Trigger: CCCAGAGAGGTTTAGTGGGAGAATGTCAGTGAATGGGATAGTTCACCTCATGGGACAACCCAGAATCTGATCACCAGGACATAGGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR GCA 90 bp CTTCAAGCGTTCATATTGCCATGGACACTGATTAGAAGAGTTATCTaGATTAAGCATTACCTTTCTGCCCCCACCCCGCCCACCCTTACC +
Preference number: 1 (lower is better)
Translates to: LQAFILPWTLIRRVI*IKHYLSAPTPPTLT
Trigger: GGTAAGGGTGGGCGGGGTGGGGGCAGAAAGGTAATGCTTAATGCAGATAACTCTTCTAATCAGTGTCCATGGCAATATGAACGCTTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 90 bp ACAAAATGGCTCAAGAAATCTGATGGGGCCATTCCTATGTCCTGGTaGTCAGATTCTGGGTTGTCCCATGAGGTGAACTATCCCATTCAC +
Preference number: 1 (lower is better)
Translates to: TKWLKKSDGAIPMSW*SDSGLSHEVNYPIH
Trigger: GTGAATGGGATAGTTCACCTCATGGGACAACCCAGAATCTGATCACCAGGACATAGGAATGGCCCCATCAGATTTCTTGAGCCATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 90 bp AAAATGAGTAAATTGAGAGAAGCAGCCTCAGCTGTGCTGTTCAAGTaGCCAGGCTGCCTTCCTACTGAGGGTAAATGGGCTTTCCTGAAA +
Preference number: 1 (lower is better)
Translates to: KMSKLREAASAVLFK*PGCLPTEGKWAFLK
Trigger: TTTCAGGAAAGCCCATTTACCCTCAGTAGGAAGGCAGCCTGGTCACTTGAACAGCACAGCTGAGGCTGCTTCTCTCAATTTACTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 90 bp CATACCACATCACGCACTGATGGCACGTCAACAGGCAAACACAATTaGGTCCATGCACTGTGGCAACCTTGTTCATTCCTTACAATATCT +
Preference number: 1 (lower is better)
Translates to: HTTSRTDGTSTGKHN*VHALWQPCSFLTIS
Trigger: AGATATTGTAAGGAATGAACAAGGTTGCCACAGTGCATGGACCCAATTGTGTTTGCCTGTTGACGTGCCATCAGTGCGTGATGTGGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 90 bp TGCTCTCTCACTGTAGCTGATAACTCACTACCCCGAGAGGCACAGTaGCTCATCAACTTTCAGTTTGGACCAACATCTATGGATAGAGAA +
Preference number: 1 (lower is better)
Translates to: CSLTVADNSLPREAQ*LINFQFGPTSMDRE
Trigger: TTCTCTATCCATAGATGTTGGTCCAAACTGAAAGTTGATGAGTCACTGTGCCTCTCGGGGTAGTGAGTTATCAGCTACAGTGAGAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 90 bp ACTGATGGCACGTCAACAGGCAAACACAATTGGGTCCATGCACTGTaGCAACCTTGTTCATTCCTTACAATATCTTGTCTCCAGATTCCT +
Preference number: 1 (lower is better)
Translates to: TDGTSTGKHNWVHAL*QPCSFLTISCLQIP
Trigger: AGGAATCTGGAGACAAGATATTGTAAGGAATGAACAAGGTTGCCACAGTGCATGGACCCAATTGTGTTTGCCTGTTGACGTGCCATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 90 bp CAAAGTTTAACTCTACAAATGGAAAATTGGAATTCCGAGGCCTTTTaGATATGCTCTACATGCAGCTGCACACGCCGTGGACTTGTTCTG +
Preference number: 1 (lower is better)
Translates to: QSLTLQMENWNSEAF*ICSTCSCTRRGLVL
Trigger: CAGAACAAGTCCACGGCGTGTGCAGCTGCATGTAGAGCATATTCAAAAGGCCTCGGAATTCCAATTTTCCATTTGTAGAGTTAAACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 90 bp GGAGCACCGCAAAAACAAAGTTGCTTAACATTCTTGAATCTAAACTaGCATGACGGGACGTTTATTAACGGCCGATCTCAGAGGTGGATT +
Preference number: 1 (lower is better)
Translates to: GAPQKQSCLTFLNLN*HDGTFINGRSQRWI
Trigger: AATCCACCTCTGAGATCGGCCGTTAATAAACGTCCCGTCATGTCAGTTTAGATTCAAGAATGTTAAGCAACTTTGTTTTTGCGGTGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 90 bp TCCTTCTCCTCCCTTACAGTTTTCTTTCATTCTCTAGATGTATCATaGCTATTTGCCACCATCTTTGCTCTGAGGCTGTCATGTGGCTTT +
Preference number: 1 (lower is better)
Translates to: SFSSLTVFFHSLDVS*LFATIFALRLSCGF
Trigger: AAAGCCACATGACAGCCTCAGAGCAAAGATGGTGGCAAATAGTCATGATACATCTAGAGAATGAAAGAAAACTGTAAGGGAGGAGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 90 bp CAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTaGGGCCTCACTTTATGCTTGTGGTTCTTCAGGAATAAGAAACTA +
Preference number: 1 (lower is better)
Translates to: QLNICTFPILQEHQH*GLTLCLWFFRNKKL
Trigger: TAGTTTCTTATTCCTGAAGAACCACAAGCATAAAGTGAGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR GCA 90 bp CTCCCTTACAGTTTTCTTTCATTCTCTAGATGTATCATGACTATTTaGCACCATCTTTGCTCTGAGGCTGTCATGTGGCTTTTTGCATCC +
Preference number: 1 (lower is better)
Translates to: LPYSFLSFSRCIMTI*HHLCSEAVMWLFAS
Trigger: GGATGCAAAAAGCCACATGACAGCCTCAGAGCAAAGATGGTGGCAAATAGTCATGATACATCTAGAGAATGAAAGAAAACTGTAAGGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 90 bp GAGGCCTCACTTTATGCTTGTGGTTCTTCAGGAATAAGAAACTACTaGGCAAGATATGTCACTGAGTTTTCTTCAAGCGTTCATATTGCC +
Preference number: 1 (lower is better)
Translates to: EASLYACGSSGIRNY*ARYVTEFSSSVHIA
Trigger: GGCAATATGAACGCTTGAAGAAAACTCAGTGACATATCTTGCTCAGTAGTTTCTTATTCCTGAAGAACCACAAGCATAAAGTGAGGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR GCA 90 bp ATTAAAAAGGAAGACCCAGTAGTAATTTCAATACATTCCTCTAGCTaGATTTCTTTGCAGTTGTTGGCACTTGGTACAGGACTTCTCATA +
Preference number: 1 (lower is better)
Translates to: IKKEDPVVISIHSSS*ISLQLLALGTGLLI
Trigger: TATGAGAAGTCCTGTACCAAGTGCCAACAACTGCAAAGAAATGCAGCTAGAGGAATGTATTGAAATTACTACTGGGTCTTCCTTTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 90 bp TCACTGAAGGTGTATCTTCAGGGTAAATTCCAAGAAGAGGACTACTaGATCAAAAGAAAGTGTATATGTTGTTTTGACAGATGCTGTGAA +
Preference number: 1 (lower is better)
Translates to: SLKVYLQGKFQEEDY*IKRKCICCFDRCCE
Trigger: TTCACAGCATCTGTCAAAACAACATATACACTTTCTTTTGATCCAGTAGTCCTCTTCTTGGAATTTACCCTGAAGATACACCTTCAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530378.5
3UTR TCA 90 bp TTATTAGGGAAGAAAACATGTCAGGGAGCAGATGACTTAAGGAAATaGTGCAAGTGCTTTTGTGAAAGGACAAATGAGGTCATACAATAT +
Preference number: 1 (lower is better)
Translates to: LLGKKTCQGADDLRK*CKCFCERTNEVIQY
Trigger: ATATTGTATGACCTCATTTGTCCTTTCACAAAAGCACTTGCATCATTTCCTTAAGTCATCTGCTCCCTGACATGTTTTCTTCCCTAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 90 bp CAGCCCATGACAGCTTCACTGAGATTCCTGCATGGCCCACGAGCCTaGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: QPMTASLRFLHGPRA*GFRFGRRTLLPGSH
Trigger: GTGACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCCATGCAGGAATCTCAGTGAAGCTGTCATGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTGTCGATATCTGGTGTaGCGGTTGCTCTGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSCRYLV*RLLWCV
Trigger: CACACACCAGAGCAACCGCCACACCAGATATCGACA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR GCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTACACAATTGGGTCCATaGACTGTGGCAACCTTGTTC +
Preference number: 2 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSTQLGP*TVATLF
Trigger: GAACAAGGTTGCCACAGTGCATGGACCCAATTGTGT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTACAGGCAAACACAATTaGGTCCATGCACTGTGGCAA +
Preference number: 2 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSTGKHN*VHALWQ
Trigger: TTGCCACAGTGCATGGACCCAATTGTGTTTGCCTGT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTAATTCCGAGGCCTTTTaGATATGCTCTACATGCAGC +
Preference number: 2 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSNSEAF*ICSTCS
Trigger: GCTGCATGTAGAGCATATTCAAAAGGCCTCGGAATT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 90 bp CTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCACCACTGTaGAACCTTGCTGCTGAATGGAATTCAGGGGGAAATGCCACTGAT +
Preference number: 2 (lower is better)
Translates to: LQVWPQDSPAWQSPL*NLAAEWNSGGNATD
Trigger: ATCAGTGGCATTTCCCCCTGAATTCCATTCAGCAGCAAGGTTCAACAGTGGTGACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGCCGCAGGACTCTCCTaGCTGGCAGTCACCACTGTT +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNAAGLS*LAVTTV
Trigger: AACAGTGGTGACTGCCAGGCAGGAGAGTCCTGCGGC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 90 bp GGTCTCAGGCAGAGAAGACCACTCTGTCGATATCTGGTGTGGCGGTaGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCA +
Preference number: 2 (lower is better)
Translates to: GLRQRRPLCRYLVWR*LWCVYVIPHHALMA
Trigger: TGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCACACCAGATATCGACAGAGTGGTCTTCTCTGCCTGAGACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCCGGCACAGCATACCTaGGTGAGAATGTTTAACCCC +
Preference number: 2 (lower is better)
Translates to: WRLLWCVYVIPHHALMARPAQHT*VRMFNP
Trigger: GGGGTTAAACATTCTCACTCAGGTATGCTGTGCCGG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCAAATCCGGCAACTGTaGGGCAAGCCCACACGAGTC +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNQIRQL*GKPTRV
Trigger: GACTCGTGTGGGCTTGCCTCACAGTTGCCGGATTTG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACAGGGGGAAATGCCACTaGTGCAGACCCTACCACTTG +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNRGKCH*CRPYHL
Trigger: CAAGTGGTAGGGTCTGCATCAGTGGCATTTCCCCCT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAGCTGCACACGCCGTaGACTTGTTCTGTTTCACAA +
Preference number: 2 (lower is better)
Translates to: WRLLWCVYVIPHHALMARQLHTP*TCSVSQ
Trigger: TTGTGAAACAGAACAAGTCCACGGCGTGTGCAGCTG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTACCACATCACGCACTaGTGGCACGTCAACAGGCAA +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHYHITH*WHVNRQ
Trigger: TTGCCTGTTGACGTGCCATCAGTGCGTGATGTGGTA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCAAGAGCACCAGCACTaGGGCCTCACTTTATGCTTG +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNQEHQH*GLTLCL
Trigger: CAAGCATAAAGTGAGGCCTCAGTGCTGGTGCTCTTG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTTTTGCTGTCCCAGCTaGAGGCCAAACACTGCTCTC +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNFCCPS*RPNTAL
Trigger: GAGAGCAGTGTTTGGCCTGCAGCTGGGACAGCAAAA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTGTCGATATCTGGTGTaGCGGTTGCTCTGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHCRYLV*RLLWCV
Trigger: CACACACCAGAGCAACCGCCACACCAGATATCGACA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGGTTGTCCCATGAGGTaGACTATCCCATTCACTGAC +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNGCPMR*TIPFTD
Trigger: GTCAGTGAATGGGATAGTTCACCTCATGGGACAACC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATAATGAACCCCAGTACTaGGGCAGAGCTGGAGCTAAA +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHNEPQY*GRAGAK
Trigger: TTTAGCTCCAGCTCTGCCTCAGTACTGGGGTTCATT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACAAGGGAGAATGCACATaGGCAGACCTGCAATGTGCA +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNKGECT*ADLQCA
Trigger: TGCACATTGCAGGTCTGCTCATGTGCATTCTCCCTT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGGAGCCACAAATGCATaGGGGCTCTTTAATAACTCT +
Preference number: 2 (lower is better)
Translates to: WRLLWCVYVIPHHALMARGATNA*GLFNNS
Trigger: AGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGAGGAACTCATCTGCTaGCCCCGGAGCTATCTGTTC +
Preference number: 2 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPEELIC*PRSYLF
Trigger: GAACAGATAGCTCCGGGGGCAGCAGATGAGTTCCTC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR GCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATCTGCAGGCCAAACACTaGTCTCTCACTGTAGCTGAT +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHLQAKH*SLTVAD
Trigger: ATCAGCTACAGTGAGAGAGCAGTGTTTGGCCTGCAG...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCCTGGTGAAACGTTTTaGTGTCCCAGCTGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPPGETF*CPSCRP
Trigger: TGGCCTGCAGCTGGGACAGCAAAACGTTTCACCAGG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCAGCTGCACACGCCGTaGACTTGTTCTGTTTCACAA +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNQLHTP*TCSVSQ
Trigger: TTGTGAAACAGAACAAGTCCACGGCGTGTGCAGCTG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCAGCTGCACACGCCGTaGACTTGTTCTGTTTCACAA +
Preference number: 2 (lower is better)
Translates to: LLWCVYVIPHHALMARQQQLHTP*TCSVSQ
Trigger: TTGTGAAACAGAACAAGTCCACGGCGTGTGCAGCTG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGTGTGGCGGTTGCTCTaGTGTGTGTATGTCATACCA +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNVWRLL*CVYVIP
Trigger: TGGTATGACATACACACACCAGAGCAACCGCCACAC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTCTGAGGCTGTCATGTaGCTTTTTGCATCCTGGGGA +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHSEAVM*LFASWG
Trigger: TCCCCAGGATGCAAAAAGCCACATGACAGCCTCAGA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTGGGAGAGGATTGCCTaGCAGTGTCCCAATTCTAAG +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHWERIA*QCPNSK
Trigger: CTTAGAATTGGGACACTGCCAGGCAATCCTCTCCCA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTGGGAGAGGATTGCCTaGCAGTGTCCCAATTCTAAG +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNWERIA*QCPNSK
Trigger: CTTAGAATTGGGACACTGCCAGGCAATCCTCTCCCA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTTCTGGCAAAAGACTTaGGGTCACAGTGAACCTCAG +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHFWQKT*GHSEPQ
Trigger: CTGAGGTTCACTGTGACCTCAAGTCTTTTGCCAGAA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATATTCCTATGTCCTGGTaGTCAGATTCTGGGTTGTCC +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHIPMSW*SDSGLS
Trigger: GGACAACCCAGAATCTGATCACCAGGACATAGGAAT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTGCTCTACATGCAGCTaGACACGCCGTGGACTTGTT +
Preference number: 2 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPCSTCS*TRRGLV
Trigger: AACAAGTCCACGGCGTGTGCAGCTGCATGTAGAGCA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACAACCTTGCTGCTGAATaGAATTCAGGGGGAAATGCC +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNNLAAE*NSGGNA
Trigger: GGCATTTCCCCCTGAATTCCATTCAGCAGCAAGGTT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCCTGAATTTAGAACTTaGCCTGGGCTTTGGTGTCAG +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNPEFRT*PGLWCQ
Trigger: CTGACACCAAAGCCCAGGCCAAGTTCTAAATTCAGG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATCACAGCATACCTGAGTaGGAATGTTTAACCCCATCT +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHHSIPE*ECLTPS
Trigger: AGATGGGGTTAAACATTCTCACTCAGGTATGCTGTG...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGAATTCCGAGGCCTTTTaGATATGCTCTACATGCAGC +
Preference number: 2 (lower is better)
Translates to: LLWCVYVIPHHALMARQQNSEAF*ICSTCS
Trigger: GCTGCATGTAGAGCATATTCAAAAGGCCTCGGAATT...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATATTTCAGCCCTAGAGTaGTCACGCCCTTTTCAAACA +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHISALE*SRPFQT
Trigger: TGTTTGAAAAGGGCGTGATCACTCTAGGGCTGAAAT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACATCAAGAGGAGAGTGTaGGAAAGATGTGATGGCAAC +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNIKRRV*ERCDGN
Trigger: GTTGCCATCACATCTTTCTCACACTCTCCTCTTGAT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGCACATGAGCAGACCTaGAATGTGCAGCATACAAAA +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNAHEQT*NVQHTK
Trigger: TTTTGTATGCTGCACATTGCAGGTCTGCTCATGTGC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTGCTTCCAGGCGTTCTaGGGACATAAAATCACTATG +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHCFQAF*GHKITM
Trigger: CATAGTGATTTTATGTCCCCAGAACGCCTGGAAGCA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTCCGAAGAAGCAGCCTaGCTTCAGAAGGAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNSEEAA*LQKEKK
Trigger: TTTCTTTTCCTTCTGAAGCCAGGCTGCTTCTTCGGA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTTAAGACCATTCTGCTaGTGTAATTGTGGAGCCACA +
Preference number: 2 (lower is better)
Translates to: LLWCVYVIPHHALMARQQLRPFC*CNCGAT
Trigger: TGTGGCTCCACAATTACATCAGCAGAATGGTCTTAA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGAAGACATCTACGGGTTaGGATAAGTTTCAAGTCCTG +
Preference number: 2 (lower is better)
Translates to: LLWCVYVIPHHALMARQQKTSTG*DKFQVL
Trigger: CAGGACTTGAAACTTATCTCAACCCGTAGATGTCTT...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACAAGACATCTACGGGTTaGGATAAGTTTCAAGTCCTG +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNKTSTG*DKFQVL
Trigger: CAGGACTTGAAACTTATCTCAACCCGTAGATGTCTT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTTGTCTCCAGATTCCTaGGTACCTTACCATTTTCTG +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNLSPDS*VPYHFL
Trigger: CAGAAAATGGTAAGGTACTCAGGAATCTGGAGACAA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCTACCACTTGTGAACTaGATTAGGGGAAAATTCTGG +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNLPLVN*IRGKFW
Trigger: CCAGAATTTTCCCCTAATTCAGTTCACAAGTGGTAG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATAACTATCCCATTCACTaGCATTCTCCCACTAAACCT +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHNYPIH*HSPTKP
Trigger: AGGTTTAGTGGGAGAATGTCAGTGAATGGGATAGTT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTATGGCTCAAGAAATCTaGTGGGGCCATTCCTATGTC +
Preference number: 2 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPMAQEI*WGHSYV
Trigger: GACATAGGAATGGCCCCATCAGATTTCTTGAGCCAT...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTGGCTTTTTGCATCCTaGGGATTTTGCAATGAACTC +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHWLFAS*GFCNEL
Trigger: GAGTTCATTGCAAAATCCCCAGGATGCAAAAAGCCA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTTTCTTTGCAGTTGTTaGCACTTGGTACAGGACTTC +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNFLCSC*HLVQDF
Trigger: GAAGTCCTGTACCAAGTGCCAACAACTGCAAAGAAA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGATTTGAAGATACTATaGAATAGGGAGCACCGCAAA +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNDLKIL*NREHRK
Trigger: TTTGCGGTGCTCCCTATTTCATAGTATCTTCAAATC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTATTGCCATGGACACTaGTTAGAAGAGTTATCTGCA +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNYCHGH*LEELSA
Trigger: TGCAGATAACTCTTCTAATCAGTGTCCATGGCAATA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGCATCCTGGGGATTTTaGAATGAACTCCCTAGATGT +
Preference number: 2 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPASWGF*NELPRC
Trigger: ACATCTAGGGAGTTCATTGCAAAATCCCCAGGATGC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTCTAAAAGGCTGAGCTaGGTACACATGAAAACAACA +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNSKRLS*VHMKTT
Trigger: TGTTGTTTTCATGTGTACCCAGCTCAGCCTTTTAGA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATACGCTCAATAGGATATaGCATCAGAAACAGAACATC +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHTLNRI*HQKQNI
Trigger: GATGTTCTGTTTCTGATGCCATATCCTATTGAGCGT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTTGTTCATGAGCTTTTaGAAAGCAATCTGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNLFMSF*KAICPQ
Trigger: TTGGGGACAGATTGCTTTCCAAAAGCTCATGAACAA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTAACTATCCCATTCACTaGCATTCTCCCACTAAACCT +
Preference number: 2 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPNYPIH*HSPTKP
Trigger: AGGTTTAGTGGGAGAATGTCAGTGAATGGGATAGTT...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACAAAACAAGAGTGAACTaGGGAGGAGAGGTATATAAT +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNKTRVN*GGEVYN
Trigger: ATTATATACCTCTCCTCCTCAGTTCACTCTTGTTTT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATAAAACAAGAGTGAACTaGGGAGGAGAGGTATATAAT +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHKTRVN*GGEVYN
Trigger: ATTATATACCTCTCCTCCTCAGTTCACTCTTGTTTT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATGATGACTTAAGGAAATaGTGCAAGTGCTTTTGTGAA +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHDDLRK*CKCFCE
Trigger: TTCACAAAAGCACTTGCATCATTTCCTTAAGTCATC...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR GCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTACTGGAAAAGACACTaGTTCATATCTGCCAATGAA +
Preference number: 2 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHYWKRH*FISANE
Trigger: TTCATTGGCAGATATGAAGCAGTGTCTTTTCCAGTA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 90 bp CCCTCCTTCAGAAAAATGTTGAATATAGTGGTGACAGTGGGCAGCTaGGCCTTGTTCCTGATCTTAAGGGAAATTCCTGTAGCATTTCTT +
Preference number: 2 (lower is better)
Translates to: PSFRKMLNIVVTVGS*ALFLILREIPVAFL
Trigger: AAGAAATGCTACAGGAATTTCCCTTAAGATCAGGAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAACATTTTTCTGAAGGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
3UTR-3UTR TCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTATTGCCATGGACACTaGTTAGAAGAGTTATCTGCA +
Preference number: 2 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPYCHGH*LEELSA
Trigger: TGCAGATAACTCTTCTAATCAGTGTCCATGGCAATA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTCAGAGGTGGATTTTTaGCTTTGTAGTGGCATTCAT +
Preference number: 2 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPSEVDF*LCSGIH
Trigger: ATGAATGCCACTACAAAGGCAAAAATCCACCTCTGA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTTGGACCAACATCTATaGATAGAGAACAAAAAGGAA +
Preference number: 2 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNLDQHL*IENKKE
Trigger: TTCCTTTTTGTTCTCTATCCATAGATGTTGGTCCAA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 90 bp TCAAAGTTTAACTCTACAAATGGAAAATTGGAATTCCGAGGCCTTTaGAATATGCTCTACATGCAGCTGCACACGCCGTGGACTTGTTCT +
Preference number: 2 (lower is better)
Translates to: SKFNSTNGKLEFRGL*NMLYMQLHTPWTCS
Trigger: AGAACAAGTCCACGGCGTGTGCAGCTGCATGTAGAGCATATTCAAAAGGCCTCGGAATTCCAATTTTCCATTTGTAGAGTTAAACTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 90 bp ACAGGGGCACGCTCAATAGGATATGGCATCAGAAACAGAACATCATaGGCAGGAATAACAGACAGAAGTTGTTTATTAGGGAAGAAAACA +
Preference number: 2 (lower is better)
Translates to: TGARSIGYGIRNRTS*AGITDRSCLLGKKT
Trigger: TGTTTTCTTCCCTAATAAACAACTTCTGTCTGTTATTCCTGCCAATGATGTTCTGTTTCTGATGCCATATCCTATTGAGCGTGCCCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTTGGACCAACATCTATaGATAGAGAACAAAAAGGAA +
Preference number: 2 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPLDQHL*IENKKE
Trigger: TTCCTTTTTGTTCTCTATCCATAGATGTTGGTCCAA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 90 bp TTCAGAAAAATGTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTaGTTCCTGATCTTAAGGGAAATTCCTGTAGCATTTCTTCATATG +
Preference number: 2 (lower is better)
Translates to: FRKMLNIVVTVGSLA*FLILREIPVAFLHM
Trigger: CATATGAAGAAATGCTACAGGAATTTCCCTTAAGATCAGGAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAACATTTTTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
3UTR CAA 90 bp AATGAGCTAGAATTGTCATCTCAATATAGTTTTAATTTGCATTACTaGGATTACCCACTTCTAGCCAAGACGGAGGCTGAATTTACCCTC +
Preference number: 2 (lower is better)
Translates to: NELELSSQYSFNLHY*DYPLLAKTEAEFTL
Trigger: GAGGGTAAATTCAGCCTCCGTCTTGGCTAGAAGTGGGTAATCCAAGTAATGCAAATTAAAACTATATTGAGATGACAATTCTAGCTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
3UTR CAA 90 bp ACTTACTATGAGCAAAATCAAGTTTCAGTCCTAAAGAACAGTCCTTaGTTCTCCACCAGCCCAGAATATTATTTTGGCATGGTCATAAAA +
Preference number: 2 (lower is better)
Translates to: TYYEQNQVSVLKNSP*FSTSPEYYFGMVIK
Trigger: TTTTATGACCATGCCAAAATAATATTCTGGGCTGGTGGAGAACAAAGGACTGTTCTTTAGGACTGAAACTTGATTTTGCTCATAGTAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 90 bp CAACAATTCAATGAGCTAGAATTGTCATCTCAATATAGTTTTAATTaGCATTACTTGGATTACCCACTTCTAGCCAAGACGGAGGCTGAA +
Preference number: 2 (lower is better)
Translates to: QQFNELELSSQYSFN*HYLDYPLLAKTEAE
Trigger: TTCAGCCTCCGTCTTGGCTAGAAGTGGGTAATCCAAGTAATGCAAATTAAAACTATATTGAGATGACAATTCTAGCTCATTGAATTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
3UTR CCA 72 bp GTGCCAGCCCATGACAGCTTCACTGAGATTCCTGCATaGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAG +
Preference number: 3 (lower is better)
Translates to: VPAHDSFTEIPA*PTSLGLQVWPQ
Trigger: CTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCCATGCAGGAATCTCAGTGAAGCTGTCATGGGCTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 72 bp CTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTaGCAGTCACCACTGTTGAACCTTGCTGCTGAATGG +
Preference number: 3 (lower is better)
Translates to: LGLQVWPQDSPA*QSPLLNLAAEW
Trigger: CCATTCAGCAGCAAGGTTCAACAGTGGTGACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCATGGCCCACGAGCCTaGGGCTTCAGGTTTGGCCGC +
Preference number: 3 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPHGPRA*GFRFGR
Trigger: GCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCCATG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 72 bp GCCTGGCAGTCACCACTGTTGAACCTTGCTGCTGAATaGAATTCAGGGGGAAATGCCACTGATGCAGACCCT +
Preference number: 3 (lower is better)
Translates to: AWQSPLLNLAAE*NSGGNATDADP
Trigger: AGGGTCTGCATCAGTGGCATTTCCCCCTGAATTCCATTCAGCAGCAAGGTTCAACAGTGGTGACTGCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR GCA 72 bp GGTTCTGAACTGCATGAGAACCCTGGTGAAACGTTTTaGTGTCCCAGCTGCAGGCCAAACACTGCTCTCTCA +
Preference number: 3 (lower is better)
Translates to: GSELHENPGETF*CPSCRPNTALS
Trigger: TGAGAGAGCAGTGTTTGGCCTGCAGCTGGGACAGCAAAACGTTTCACCAGGGTTCTCATGCAGTTCAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 72 bp GTGGTCTCAGGCAGAGAAGACCACTCTGTCGATATCTaGTGTGGCGGTTGCTCTGGTGTGTGTATGTCATAC +
Preference number: 3 (lower is better)
Translates to: VVSGREDHSVDI*CGGCSGVCMSY
Trigger: GTATGACATACACACACCAGAGCAACCGCCACACCAGATATCGACAGAGTGGTCTTCTCTGCCTGAGACCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 72 bp TGGGGATTTTGCAATGAACTCCCTAGATGTGCCAGCTaGGACAAGGCAACTCAGTGTAAAGGTGCCAGCCCA +
Preference number: 3 (lower is better)
Translates to: WGFCNELPRCAS*DKATQCKGASP
Trigger: TGGGCTGGCACCTTTACACTGAGTTGCCTTGTCCCAGCTGGCACATCTAGGGAGTTCATTGCAAAATCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 72 bp AAATTGAGAGAAGCAGCCTCAGCTGTGCTGTTCAAGTaGCCAGGCTGCCTTCCTACTGAGGGTAAATGGGCT +
Preference number: 3 (lower is better)
Translates to: KLREAASAVLFK*PGCLPTEGKWA
Trigger: AGCCCATTTACCCTCAGTAGGAAGGCAGCCTGGTCACTTGAACAGCACAGCTGAGGCTGCTTCTCTCAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR GCA 72 bp AGAGAAGACCACTCTGTCGATATCTGGTGTGGCGGTTaGTCTGGTGTGTGTATGTCATACCACATCACGCAC +
Preference number: 3 (lower is better)
Translates to: REDHSVDIWCGG*SGVCMSYHITH
Trigger: GTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCACACCAGATATCGACAGAGTGGTCTTCTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 72 bp AGACCACTCTGTCGATATCTGGTGTGGCGGTTGCTCTaGTGTGTGTATGTCATACCACATCACGCACTGATG +
Preference number: 3 (lower is better)
Translates to: RPLCRYLVWRLL*CVYVIPHHALM
Trigger: CATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCACACCAGATATCGACAGAGTGGTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 72 bp CTCAGGCAGAGAAGACCACTCTGTCGATATCTGGTGTaGCGGTTGCTCTGGTGTGTGTATGTCATACCACAT +
Preference number: 3 (lower is better)
Translates to: LRQRRPLCRYLV*RLLWCVYVIPH
Trigger: ATGTGGTATGACATACACACACCAGAGCAACCGCCACACCAGATATCGACAGAGTGGTCTTCTCTGCCTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CAA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATAACAGGCAAACACAATaGGGTCCATGCACTGTGGCA +
Preference number: 3 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHNRQTQ*GPCTVA
Trigger: TGCCACAGTGCATGGACCCAATTGTGTTTGCCTGTT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 72 bp TGCTCTGGTGTGTGTATGTCATACCACATCACGCACTaGTGGCACGTCAACAGGCAAACACAATTGGGTCCA +
Preference number: 3 (lower is better)
Translates to: CSGVCMSYHITH*WHVNRQTQLGP
Trigger: TGGACCCAATTGTGTTTGCCTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR GCA 72 bp GGAAATGTCTGGATCTGTGGACAGTGGGTTCTGAACTaGATGAGAACCCTGGTGAAACGTTTTGCTGTCCCA +
Preference number: 3 (lower is better)
Translates to: GNVWICGQWVLN*MRTLVKRFAVP
Trigger: TGGGACAGCAAAACGTTTCACCAGGGTTCTCATGCAGTTCAGAACCCACTGTCCACAGATCCAGACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 72 bp TCACGCACTGATGGCACGTCAACAGGCAAACACAATTaGGTCCATGCACTGTGGCAACCTTGTTCATTCCTT +
Preference number: 3 (lower is better)
Translates to: SRTDGTSTGKHN*VHALWQPCSFL
Trigger: AAGGAATGAACAAGGTTGCCACAGTGCATGGACCCAATTGTGTTTGCCTGTTGACGTGCCATCAGTGCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 72 bp TCCTGGCTCAGGAGGGTGTACTCCGAAGAAGCAGCCTaGCTTCAGAAGGAAAAGAAAGCAGCCTTTAATTTC +
Preference number: 3 (lower is better)
Translates to: SWLRRVYSEEAA*LQKEKKAAFNF
Trigger: GAAATTAAAGGCTGCTTTCTTTTCCTTCTGAAGCCAGGCTGCTTCTTCGGAGTACACCCTCCTGAGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 72 bp TCCTATGTCCTGGTGATCAGATTCTGGGTTGTCCCATaGGGTGAACTATCCCATTCACTGACATTCTCCCAC +
Preference number: 3 (lower is better)
Translates to: SYVLVIRFWVVP*GELSHSLTFSH
Trigger: GTGGGAGAATGTCAGTGAATGGGATAGTTCACCTCATGGGACAACCCAGAATCTGATCACCAGGACATAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 72 bp CAGTTGTCCCAACAGCCCTACACAAACTTTACACTTTaGAACAGCAGCCAGCATGTCAGTCCAGCATGTCAG +
Preference number: 3 (lower is better)
Translates to: QLSQQPYTNFTL*NSSQHVSPACQ
Trigger: CTGACATGCTGGACTGACATGCTGGCTGCTGTTTCAAAGTGTAAAGTTTGTGTAGGGCTGTTGGGACAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CAA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTGCACTGTGGCAACCTaGTTCATTCCTTACAATATC +
Preference number: 3 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNCTVAT*FIPYNI
Trigger: GATATTGTAAGGAATGAACAAGGTTGCCACAGTGCA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CAA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTGCAAAATGAGTAAATaGAGAGAAGCAGCCTCAGCT +
Preference number: 3 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHCKMSK*REAASA
Trigger: AGCTGAGGCTGCTTCTCTCAATTTACTCATTTTGCA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CAA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCACAAACTTTACACTTaGAAACAGCAGCCAGCATGT +
Preference number: 3 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNHKLYT*KQQPAC
Trigger: ACATGCTGGCTGCTGTTTCAAAGTGTAAAGTTTGTG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 72 bp TGTCCTGGTGATCAGATTCTGGGTTGTCCCATGAGGTaGACTATCCCATTCACTGACATTCTCCCACTAAAC +
Preference number: 3 (lower is better)
Translates to: CPGDQILGCPMR*TIPFTDILPLN
Trigger: GTTTAGTGGGAGAATGTCAGTGAATGGGATAGTTCACCTCATGGGACAACCCAGAATCTGATCACCAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 72 bp CTCAAGAAATCTGATGGGGCCATTCCTATGTCCTGGTaGTCAGATTCTGGGTTGTCCCATGAGGTGAACTAT +
Preference number: 3 (lower is better)
Translates to: LKKSDGAIPMSW*SDSGLSHEVNY
Trigger: ATAGTTCACCTCATGGGACAACCCAGAATCTGATCACCAGGACATAGGAATGGCCCCATCAGATTTCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 72 bp ATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTaGGGCCTCACTTTATGCTTGTGGTTCTTCAGGAAT +
Preference number: 3 (lower is better)
Translates to: ICTFPILQEHQH*GLTLCLWFFRN
Trigger: ATTCCTGAAGAACCACAAGCATAAAGTGAGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR GCA 72 bp TTCATATTGCCATGGACACTGATTAGAAGAGTTATCTaGATTAAGCATTACCTTTCTGCCCCCACCCCGCCC +
Preference number: 3 (lower is better)
Translates to: FILPWTLIRRVI*IKHYLSAPTPP
Trigger: GGGCGGGGTGGGGGCAGAAAGGTAATGCTTAATGCAGATAACTCTTCTAATCAGTGTCCATGGCAATATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CAA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTGGCATTCATGCTTCTaGCTATTAAATGGTCACAGA +
Preference number: 3 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNWHSCF*LLNGHR
Trigger: TCTGTGACCATTTAATAGCAAGAAGCATGAATGCCA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 72 bp ACTCTACAAATGGAAAATTGGAATTCCGAGGCCTTTTaGATATGCTCTACATGCAGCTGCACACGCCGTGGA +
Preference number: 3 (lower is better)
Translates to: TLQMENWNSEAF*ICSTCSCTRRG
Trigger: TCCACGGCGTGTGCAGCTGCATGTAGAGCATATTCAAAAGGCCTCGGAATTCCAATTTTCCATTTGTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 72 bp ACTGTAGCTGATAACTCACTACCCCGAGAGGCACAGTaGCTCATCAACTTTCAGTTTGGACCAACATCTATG +
Preference number: 3 (lower is better)
Translates to: TVADNSLPREAQ*LINFQFGPTSM
Trigger: CATAGATGTTGGTCCAAACTGAAAGTTGATGAGTCACTGTGCCTCTCGGGGTAGTGAGTTATCAGCTACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTTAAGATGCCAAAGATaGTCTAAGACTTTGCAGTGT +
Preference number: 3 (lower is better)
Translates to: LLWCVYVIPHHALMARQQLRCQR*SKTLQC
Trigger: ACACTGCAAAGTCTTAGACAATCTTTGGCATCTTAA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CAA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTCATCAACTTTCAGTTaGGACCAACATCTATGGATA +
Preference number: 3 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHSSTFS*DQHLWI
Trigger: TATCCATAGATGTTGGTCCAAACTGAAAGTTGATGA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 72 bp GTCTCACACTTTACGAAACAATTAAGACCATTCTGCTaGTGTAATTGTGGAGCCACAAATGCATGCGGGCTC +
Preference number: 3 (lower is better)
Translates to: VSHFTKQLRPFC*CNCGATNACGL
Trigger: GAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGCAGAATGGTCTTAATTGTTTCGTAAAGTGTGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 72 bp ACGTCAACAGGCAAACACAATTGGGTCCATGCACTGTaGCAACCTTGTTCATTCCTTACAATATCTTGTCTC +
Preference number: 3 (lower is better)
Translates to: TSTGKHNWVHAL*QPCSFLTISCL
Trigger: GAGACAAGATATTGTAAGGAATGAACAAGGTTGCCACAGTGCATGGACCCAATTGTGTTTGCCTGTTGACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 72 bp AATGAAGCAAACCGAGGTGCTTCTAAAAGGCTGAGCTaGGTACACATGAAAACAACAAAGCTTCCGTACCTT +
Preference number: 3 (lower is better)
Translates to: NEANRGASKRLS*VHMKTTKLPYL
Trigger: AAGGTACGGAAGCTTTGTTGTTTTCATGTGTACCCAGCTCAGCCTTTTAGAAGCACCTCGGTTTGCTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR GCA 72 bp AGTAGCATGTCTTCAAAGAAATCCTTGTGTGATAAGTaGAGTTCATTTTGTTCACACGTAGGCAGGTCCCCA +
Preference number: 3 (lower is better)
Translates to: SSMSSKKSLCDK*SSFCSHVGRSP
Trigger: TGGGGACCTGCCTACGTGTGAACAAAATGAACTGCACTTATCACACAAGGATTTCTTTGAAGACATGCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 72 bp CTTTTGAATATGCTCTACATGCAGCTGCACACGCCGTaGACTTGTTCTGTTTCACAATATGAAATCCTCAGT +
Preference number: 3 (lower is better)
Translates to: LLNMLYMQLHTP*TCSVSQYEILS
Trigger: ACTGAGGATTTCATATTGTGAAACAGAACAAGTCCACGGCGTGTGCAGCTGCATGTAGAGCATATTCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CAA 90 bp ACTTATAATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACCTGTGACAGTGGGCAGCTaGGCCTTGTTCCTGATCTTA +
Preference number: 3 (lower is better)
Translates to: TYNNFHALQNRIPVSSQPVTVGS*ALFLIL
Trigger: TAAGATCAGGAACAAGGCCAAGCTGCCCACTGTCAC...AGGTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTATTATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
3UTR GCA 72 bp GAAGACCCAGTAGTAATTTCAATACATTCCTCTAGCTaGATTTCTTTGCAGTTGTTGGCACTTGGTACAGGA +
Preference number: 3 (lower is better)
Translates to: EDPVVISIHSSS*ISLQLLALGTG
Trigger: TCCTGTACCAAGTGCCAACAACTGCAAAGAAATGCAGCTAGAGGAATGTATTGAAATTACTACTGGGTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 72 bp AAGAAAACATGTCAGGGAGCAGATGACTTAAGGAAATaGTGCAAGTGCTTTTGTGAAAGGACAAATGAGGTC +
Preference number: 3 (lower is better)
Translates to: KKTCQGADDLRK*CKCFCERTNEV
Trigger: GACCTCATTTGTCCTTTCACAAAAGCACTTGCATCATTTCCTTAAGTCATCTGCTCCCTGACATGTTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 72 bp TCACGGCATATACATTATCACCCAAAGATGGCATGTTaGACATATCAGGAAAGCACCTTGTGCAAAAAGGAA +
Preference number: 3 (lower is better)
Translates to: SRHIHYHPKMAC*TYQESTLCKKE
Trigger: TTCCTTTTTGCACAAGGTGCTTTCCTGATATGTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR GCA 72 bp AGTTTTCTTTCATTCTCTAGATGTATCATGACTATTTaGCACCATCTTTGCTCTGAGGCTGTCATGTGGCTT +
Preference number: 3 (lower is better)
Translates to: SFLSFSRCIMTI*HHLCSEAVMWL
Trigger: AAGCCACATGACAGCCTCAGAGCAAAGATGGTGGCAAATAGTCATGATACATCTAGAGAATGAAAGAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 72 bp CAAAAACAAAGTTGCTTAACATTCTTGAATCTAAACTaGCATGACGGGACGTTTATTAACGGCCGATCTCAG +
Preference number: 3 (lower is better)
Translates to: QKQSCLTFLNLN*HDGTFINGRSQ
Trigger: CTGAGATCGGCCGTTAATAAACGTCCCGTCATGTCAGTTTAGATTCAAGAATGTTAAGCAACTTTGTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR TCA 72 bp CTTTATGCTTGTGGTTCTTCAGGAATAAGAAACTACTaGGCAAGATATGTCACTGAGTTTTCTTCAAGCGTT +
Preference number: 3 (lower is better)
Translates to: LYACGSSGIRNY*ARYVTEFSSSV
Trigger: AACGCTTGAAGAAAACTCAGTGACATATCTTGCTCAGTAGTTTCTTATTCCTGAAGAACCACAAGCATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CCA 72 bp ATGTCACTGAGTTTTCTTCAAGCGTTCATATTGCCATaGACACTGATTAGAAGAGTTATCTGCATTAAGCAT +
Preference number: 3 (lower is better)
Translates to: MSLSFLQAFILP*TLIRRVICIKH
Trigger: ATGCTTAATGCAGATAACTCTTCTAATCAGTGTCCATGGCAATATGAACGCTTGAAGAAAACTCAGTGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR-3UTR CAA 90 bp GAGGACTACTGGATCAAAAGAAAGTGTATATGTTGTTTTGACAGATGCTGTGAATGTTTCTTCACAACCTaGACAGAAGAATGTGTTTCA +
Preference number: 3 (lower is better)
Translates to: EDYWIKRKCICCFDRCCECFFTT*TEECVS
Trigger: TGAAACACATTCTTCTGTCAAGGTTGTGAAGAAACA...TTCACAGCATCTGTCAAAACAACATATACACTTTCTTTTGATCCAGTAGTCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR GCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCGGCAAGACTCCCTTTaGGGCGCTCTGGGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSRQDSL*GALGFQ
Trigger: TTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCAGGTGACACCTGCATaGTGGCCAGCTGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSQVTPA*WPAERH
Trigger: ATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTGGTCGCTTAATGTGTaGCTCGCTGCTGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSWSLNV*LAAGTA
Trigger: GGCCGTGCCAGCAGCGAGCCACACATTAAGCGACCA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCTTGGGCTTCAGGTTTaGCCGCAGGACTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSLGLQV*PQDSPA
Trigger: GGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCAAATCCGGCAACTGTaGGGCAAGCCCACACGAGTC +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSQIRQL*GKPTRV
Trigger: GACTCGTGTGGGCTTGCCTCACAGTTGCCGGATTTG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTGGCTGTTGCTGCTGTTaGTCCCGCTGGATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSGCCCC*SRWICS
Trigger: AGAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCC...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSVTPAC*PAERHR
Trigger: TCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCAC...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTGCTGGTTTTGCTGGCTaGGAAGAGGTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSAGFAG*EEVLGG
Trigger: CCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGC...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTGCGCTGCCAGTAGCTaGTCCCGTAAACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSCAASS*SRKLIS
Trigger: GCTGATCAGTTTACGGGAGCAGCTACTGGCAGCGCA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTAGTGGCACCTCCCTCTaGATCTTCTGGCCGAGTAAG +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSSGTSL*IFWPSK
Trigger: CTTACTCGGCCAGAAGATGCAGAGGGAGGTGCCACT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316399.10
ENST00000396356.7
CDS-3UTR CCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTGTGTGGCTCGCTGCTaGCACGGCCGCGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARCVARC*HGRGRP
Trigger: GGGACGCCCGCGGCCGTGCCAGCAGCGAGCCACACA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTGTGGTGATTGGAATCTaGGGCTGTTGCCCCACAGTA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSVVIGI*GCCPTV
Trigger: TACTGTGGGGCAACAGCCTCAGATTCCAATCACCAC...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCCGGCACAGCATACCTaGGTGAGAATGTTTAACCCC +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSPAQHT*VRMFNP
Trigger: GGGGTTAAACATTCTCACTCAGGTATGCTGTGCCGG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTGCTCTACATGCAGCTaGACACGCCGTGGACTTGTT +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSCSTCS*TRRGLV
Trigger: AACAAGTCCACGGCGTGTGCAGCTGCATGTAGAGCA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCAGGCTCTGCTGTCTTaGGTCGGGATGAGAGATTCA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSQALLS*VGMRDS
Trigger: TGAATCTCTCATCCCGACCCAAGACAGCAGAGCCTG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTGTGTGGCTCGCTGCTaGCACGGCCGCGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGCVARC*HGRGRP
Trigger: GGGACGCCCGCGGCCGTGCCAGCAGCGAGCCACACA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCACTCTGTCGATATCTaGTGTGGCGGTTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSHSVDI*CGGCSG
Trigger: ACCAGAGCAACCGCCACACCAGATATCGACAGAGTG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTGAAAAATTGGGATCATaGGCGGAGGCATGTGACCCT +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSEKLGS*AEACDP
Trigger: AGGGTCACATGCCTCCGCTCATGATCCCAATTTTTC...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTTCATCACTGTATCCTaGTCCCCAAAAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSFITVS*SPKRAG
Trigger: CCCTGCCCTTTTTGGGGATCAGGATACAGTGATGAA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCACCTGTTCCTGTGGTaGTTGGAATCTGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSHLFLW*LESEAV
Trigger: AACAGCCTCAGATTCCAATCACCACAGGAACAGGTG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCAGTCAGATGTCATCTaGGGCGATGGTGTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSQSDVI*GDGVVV
Trigger: AACTACCACACCATCGCCTCAGATGACATCTGACTG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTGGTTGTCCCATGAGGTaGACTATCCCATTCACTGAC +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSGCPMR*TIPFTD
Trigger: GTCAGTGAATGGGATAGTTCACCTCATGGGACAACC...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCATCAACAATGCAGGTaGGTTTCGGTCGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSHQQCR*VSVGVC
Trigger: ACAAACCCCGACCGAAACGCACCTGCATTGTTGATG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCCCACAGTAAAGAACTaGCTCATCTCCTGTCTCCGA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSPTVKN*LISCLR
Trigger: TCGGAGACAGGAGATGAGGCAGTTCTTTACTGTGGG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTAAGGTCGATGACACCTaGGCCCAGTTTTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSKVDDT*AQFSIF
Trigger: GAAGATGGAAAACTGGGCCCAGGTGTCATCGACCTT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTGTGTGGCTCGCTGCTaGCACGGCCGCGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNCVARC*HGRGRP
Trigger: GGGACGCCCGCGGCCGTGCCAGCAGCGAGCCACACA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCAGCTGCACACGCCGTaGACTTGTTCTGTTTCACAA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSQLHTP*TCSVSQ
Trigger: TTGTGAAACAGAACAAGTCCACGGCGTGTGCAGCTG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTGTGTGGCGGTTGCTCTaGTGTGTGTATGTCATACCA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSVWRLL*CVYVIP
Trigger: TGGTATGACATACACACACCAGAGCAACCGCCACAC...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTGGGAGAGGATTGCCTaGCAGTGTCCCAATTCTAAG +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSWERIA*QCPNSK
Trigger: CTTAGAATTGGGACACTGCCAGGCAATCCTCTCCCA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 72 bp ACAGCTTCACTGAGATTCCTGCATGGCCCACGAGCCTaGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TASLRFLHGPRA*GFRFGRRTLLP
Trigger: AGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCCATGCAGGAATCTCAGTGAAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTTTTGTTTGGCAGATTaGCAGGGCTGGTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSFCLAD*QGWFCW
Trigger: CCAGCAAAACCAGCCCTGTCAATCTGCCAAACAAAA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTTCTGGCAAAAGACTTaGGGTCACAGTGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSFWQKT*GHSEPQ
Trigger: CTGAGGTTCACTGTGACCTCAAGTCTTTTGCCAGAA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTGTTGAACCTTGCTGCTaGATGGAATTCAGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSVEPCC*MEFRGK
Trigger: TTTCCCCCTGAATTCCATTCAGCAGCAAGGTTCAAC...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTTCTGGGTTGTCCCATaGGGTGAACTATCCCATTCA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSFWVVP*GELSHS
Trigger: TGAATGGGATAGTTCACCTCATGGGACAACCCAGAA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTATGGCTCAAGAAATCTaGTGGGGCCATTCCTATGTC +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSMAQEI*WGHSYV
Trigger: GACATAGGAATGGCCCCATCAGATTTCTTGAGCCAT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTGAGATTCAGAGGCTGTaGTGCTGCTTCATCCTTAAC +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSEIQRL*CCFILN
Trigger: GTTAAGGATGAAGCAGCAGCACAGCCTCTGAATCTC...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTAGGCCCTTTAGCCTTTaGTTAATTTGTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSRPFSL*LICGWE
Trigger: CTCCCACCCACAAATTAACCAAAGGCTAAAGGGCCT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316399.10
ENST00000396356.7
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTGTGTGGCTCGCTGCTaGCACGGCCGCGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGCVARC*HGRGRP
Trigger: GGGACGCCCGCGGCCGTGCCAGCAGCGAGCCACACA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTAACCTTGCTGCTGAATaGAATTCAGGGGGAAATGCC +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSNLAAE*NSGGNA
Trigger: GGCATTTCCCCCTGAATTCCATTCAGCAGCAAGGTT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCTTGTTGAATGGTACTaGCAAGTGTTGGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSLVEWY*QVLVAP
Trigger: AGGAGCTACCAACACTTGTCAGTACCATTCAACAAG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCATAAGTGCTCTGGATaGCCGGGAGGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARHKCSG*PGGWAP
Trigger: CGGAGCCCAGCCTCCCGGTCATCCAGAGCACTTATG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTGCTCCCGCTGGATCTaGTCTCGCATCTTCCGCGCC +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARCSRWI*SRIFRA
Trigger: GGCGCGGAAGATGCGAGAGCAGATCCAGCGGGAGCA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTGGAGCCACAAATGCATaGGGGCTCTTTAATAACTCT +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSGATNA*GLFNNS
Trigger: AGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCC...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCCTGTAGTTAGGAGATaGGGAATAAAACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSPVVRR*GIKPHC
Trigger: GCAGTGAGGTTTTATTCCCCATCTCCTAACTACAGG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCCATTGTTGATGGAATaGACTGTACGGGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSPLLME*TVRGSY
Trigger: ATAACTACCCCGTACAGTTCATTCCATCAACAATGG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCATAAGTGCTCTGGATaGCCGGGAGGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGHKCSG*PGGWAP
Trigger: CGGAGCCCAGCCTCCCGGTCATCCAGAGCACTTATG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTAAGACATCTACGGGTTaGGATAAGTTTCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSKTSTG*DKFQVL
Trigger: CAGGACTTGAAACTTATCTCAACCCGTAGATGTCTT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTAGACCCTACCACTTGTaGACTGAATTAGGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSRPYHL*TELGEN
Trigger: ATTTTCCCCTAATTCAGTTCACAAGTGGTAGGGTCT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTATGTCAGGGAGCAGATaGCTTAAGGAAATGATGCAA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSMSGSR*LKEMMQ
Trigger: TTGCATCATTTCCTTAAGTCATCTGCTCCCTGACAT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTTGGGCAGCAGCAGCTaGTGCCAGAGTCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGLGSSS*CQSPLV
Trigger: GACCAGCGGACTCTGGCAGCAGCTGCTGCTGCCCAA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTGCTCCCGCTGGATCTaGTCTCGCATCTTCCGCGCC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGCSRWI*SRIFRA
Trigger: GGCGCGGAAGATGCGAGAGCAGATCCAGCGGGAGCA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGCCGCAGGACTCTCCTaGCTGGCAGTCACCACTGTT +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARAAGLS*LAVTTV
Trigger: AACAGTGGTGACTGCCAGGCAGGAGAGTCCTGCGGC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATGTGTGGCTCGCTGCTaGCACGGCCGCGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGCVARC*HGRGRP
Trigger: GGGACGCCCGCGGCCGTGCCAGCAGCGAGCCACACA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTGGCTTTTTGCATCCTaGGGATTTTGCAATGAACTC +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSWLFAS*GFCNEL
Trigger: GAGTTCATTGCAAAATCCCCAGGATGCAAAAAGCCA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTTCACTGCTATAGTCTaGTTTGGGGTCATCTTCATA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSFTAIV*FGVIFI
Trigger: TATGAAGATGACCCCAAATCAGACTATAGCAGTGAA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTATTGCCATGGACACTaGTTAGAAGAGTTATCTGCA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSYCHGH*LEELSA
Trigger: TGCAGATAACTCTTCTAATCAGTGTCCATGGCAATA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTAGCAAGATATGTCACTaGGTTTTCTTCAAGCGTTCA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSSKICH*VFFKRS
Trigger: TGAACGCTTGAAGAAAACTCAGTGACATATCTTGCT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTAGGAGATTAATTTTGTaGTGCTGTTGCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSRRLIL*CCCRSC
Trigger: GCAACTTCTGCAACAGCAGCACAAAATTAATCTCCT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGGCAGCAGCAGCTGCTaGCAGAGTCCGCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNGSSSC*QSPLVM
Trigger: CATGACCAGCGGACTCTGGCAGCAGCTGCTGCTGCC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTTGGGCAGCAGCAGCTaGTGCCAGAGTCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHLGSSS*CQSPLV
Trigger: GACCAGCGGACTCTGGCAGCAGCTGCTGCTGCCCAA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTTGGGCAGCAGCAGCTaGTGCCAGAGTCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQLGSSS*CQSPLV
Trigger: GACCAGCGGACTCTGGCAGCAGCTGCTGCTGCCCAA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTTGGGCAGCAGCAGCTaGTGCCAGAGTCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNLGSSS*CQSPLV
Trigger: GACCAGCGGACTCTGGCAGCAGCTGCTGCTGCCCAA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCAGGTGACACCTGCATaGTGGCCAGCTGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGQVTPA*WPAERH
Trigger: ATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGGCTGTTGCTGCTGTTaGTCCCGCTGGATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARGCCCC*SRWICS
Trigger: AGAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTACACCATGTGGCTGTTaGTGCTGTTGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARTPCGC*CCCSRW
Trigger: CCAGCGGGAGCAACAGCAGCAACAGCCACATGGTGT...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGCCGCAGGACTCTCCTaGCTGGCAGTCACCACTGTT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGAAGLS*LAVTTV
Trigger: AACAGTGGTGACTGCCAGGCAGGAGAGTCCTGCGGC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGCTGGGAAGAGGTTCTaGGTGGGAGACGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGAGKRF*VGDVGD
Trigger: GTCCCCAACGTCTCCCACCCAGAACCTCTTCCCAGC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGCTGGTTTTGCTGGCTaGGAAGAGGTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARAGFAG*EEVLGG
Trigger: CCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTGGTCGCTTAATGTGTaGCTCGCTGCTGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGWSLNV*LAAGTA
Trigger: GGCCGTGCCAGCAGCGAGCCACACATTAAGCGACCA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGATGGCCCACGAGCCTTaGGCTTCAGGTTTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGMAHEP*ASGLAA
Trigger: TGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCCAT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTCTAAAAGGCTGAGCTaGGTACACATGAAAACAACA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSSKRLS*VHMKTT
Trigger: TGTTGTTTTCATGTGTACCCAGCTCAGCCTTTTAGA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTTGTTCATGAGCTTTTaGAAAGCAATCTGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSLFMSF*KAICPQ
Trigger: TTGGGGACAGATTGCTTTCCAAAAGCTCATGAACAA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 72 bp TGGCCGCAGGACTCTCCTGCCTGGCAGTCACCACTGTaGAACCTTGCTGCTGAATGGAATTCAGGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: WPQDSPAWQSPL*NLAAEWNSGGN
Trigger: ATTTCCCCCTGAATTCCATTCAGCAGCAAGGTTCAACAGTGGTGACTGCCAGGCAGGAGAGTCCTGCGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTAGGGGGAAATGCCACTaGTGCAGACCCTACCACTTG +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARRGKCH*CRPYHL
Trigger: CAAGTGGTAGGGTCTGCATCAGTGGCATTTCCCCCT...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCGGCAAGACTCCCTTTaGGGCGCTCTGGGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQRQDSL*GALGFQ
Trigger: TTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCGGCAAGACTCCCTTTaGGGCGCTCTGGGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNRQDSL*GALGFQ
Trigger: TTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCAGCAGCAGCTGCTaGCAGAGTCCGCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGGSSSC*QSPLVM
Trigger: CATGACCAGCGGACTCTGGCAGCAGCTGCTGCTGCC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTTGGGCAGCAGCAGCTaGTGCCAGAGTCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLGSSS*CQSPLV
Trigger: GACCAGCGGACTCTGGCAGCAGCTGCTGCTGCCCAA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCCATGTGGCTGTTGCTaGTGTTGCTCCCGCTGGATC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGPCGCC*CCSRWI
Trigger: GATCCAGCGGGAGCAACAGCAGCAACAGCCACATGG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGACACCATGTGGCTGTTaGTGCTGTTGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGTPCGC*CCCSRW
Trigger: CCAGCGGGAGCAACAGCAGCAACAGCCACATGGTGT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGAGGAACTCATCTGCTaGCCCCGGAGCTATCTGTTC +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMAREELIC*PRSYLF
Trigger: GAACAGATAGCTCCGGGGGCAGCAGATGAGTTCCTC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCCTGGTGAAACGTTTTaGTGTCCCAGCTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARPGETF*CPSCRP
Trigger: TGGCCTGCAGCTGGGACAGCAAAACGTTTCACCAGG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTACTGGAAAAGACACTaGTTCATATCTGCCAATGAA +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSYWKRH*FISANE
Trigger: TTCATTGGCAGATATGAAGCAGTGTCTTTTCCAGTA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTATACATTCCTCTAGCTaGATTTCTTTGCAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSIHSSS*ISLQLL
Trigger: CAACAACTGCAAAGAAATGCAGCTAGAGGAATGTAT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGVTPAC*PAERHR
Trigger: TCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCAC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCTGGGTGGGAGACGTTaGGGACTTTACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGLGGRR*GLYRLC
Trigger: GCAGAGCCTGTAAAGTCCCCAACGTCTCCCACCCAG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGCTGGGAAGAGGTTCTaGGTGGGAGACGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNAGKRF*VGDVGD
Trigger: GTCCCCAACGTCTCCCACCCAGAACCTCTTCCCAGC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGCTGGGAAGAGGTTCTaGGTGGGAGACGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQAGKRF*VGDVGD
Trigger: GTCCCCAACGTCTCCCACCCAGAACCTCTTCCCAGC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGCTGGTTTTGCTGGCTaGGAAGAGGTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGAGFAG*EEVLGG
Trigger: CCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTGGTCGCTTAATGTGTaGCTCGCTGCTGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQWSLNV*LAAGTA
Trigger: GGCCGTGCCAGCAGCGAGCCACACATTAAGCGACCA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTGGTCGCTTAATGTGTaGCTCGCTGCTGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHWSLNV*LAAGTA
Trigger: GGCCGTGCCAGCAGCGAGCCACACATTAAGCGACCA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGTGCTTCAGCCACAGTaGCACCTCCTGTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGVLQPQ*HLLLAN
Trigger: GTTGGCCAACAGGAGGTGCCACTGTGGCTGAAGCAC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTGGGAGGCCACATGTTaGTCACTGCCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARWEATC*SLPSSF
Trigger: AAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTGGTGGCTGTGGAGTTaGTGGCATCTTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGWWLWS*WHLCSR
Trigger: CCTGGAGCAAAGATGCCATCAACTCCACAGCCACCA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTACCACATCACGCACTaGTGGCACGTCAACAGGCAA +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARYHITH*WHVNRQ
Trigger: TTGCCTGTTGACGTGCCATCAGTGCGTGATGTGGTA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGAGGGGGAAATGCCACTaGTGCAGACCCTACCACTTG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGRGKCH*CRPYHL
Trigger: CAAGTGGTAGGGTCTGCATCAGTGGCATTTCCCCCT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGCTGTGCTGTTCAAGTaGCCAGGCTGCCTTCCTACT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGAVLFK*PGCLPT
Trigger: AGTAGGAAGGCAGCCTGGTCACTTGAACAGCACAGC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCGGCAAGACTCCCTTTaGGGCGCTCTGGGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGRQDSL*GALGFQ
Trigger: TTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCAGGTGACACCTGCATaGTGGCCAGCTGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGQVTPA*WPAERH
Trigger: ATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATGTCCCTGTAGACTCGTaGTTCAGCCACAGTGGCACC +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHVPVDS*FSHSGT
Trigger: GGTGCCACTGTGGCTGAAGCACGAGTCTACAGGGAC...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTGCTCTACATGCAGCTaGACACGCCGTGGACTTGTT +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARCSTCS*TRRGLV
Trigger: AACAAGTCCACGGCGTGTGCAGCTGCATGTAGAGCA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTTTTGCTGTCCCAGCTaGAGGCCAAACACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARFCCPS*RPNTAL
Trigger: GAGAGCAGTGTTTGGCCTGCAGCTGGGACAGCAAAA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGCCCACCCTTACCTCTaGCCCAAAGGTACCAGCATT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGAHPYL*PKGTSI
Trigger: AATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCCCTTTGCGGCGCTCTaGGGTTCCAAAAGTAACACT +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARPFAAL*GSKSNT
Trigger: AGTGTTACTTTTGGAACCCCAGAGCGCCGCAAAGGG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATAAGAGGAATCCCTGTTaGGCAGCAGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHKRNPC*AAAAAA
Trigger: GGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATCTGGGTGGGAGACGTTaGGGACTTTACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHLGGRR*GLYRLC
Trigger: GCAGAGCCTGTAAAGTCCCCAACGTCTCCCACCCAG...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGCTGGGAAGAGGTTCTaGGTGGGAGACGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGAGKRF*VGDVGD
Trigger: GTCCCCAACGTCTCCCACCCAGAACCTCTTCCCAGC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTGCTGTTGCTCCCGCTaGATCTGCTCTCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGCCCSR*ICSRIF
Trigger: GAAGATGCGAGAGCAGATCCAGCGGGAGCAACAGCA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGATGGCCCACGAGCCTTaGGCTTCAGGTTTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGMAHEP*ASGLAA
Trigger: TGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCCAT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGACTTGGCCTGGGCTTTaGTGTCAGGACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGTWPGL*CQDPGK
Trigger: TTTGCCAGGGTCCTGACACCAAAGCCCAGGCCAAGT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTGGGAGGCCACATGTTaGTCACTGCCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGWEATC*SLPSSF
Trigger: AAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCATTCTTTGCTGAGATaGCAGAACGCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARHSLLR*QNAVPV
Trigger: GACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTGGTGGCTGTGGAGTTaGTGGCATCTTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNWWLWS*WHLCSR
Trigger: CCTGGAGCAAAGATGCCATCAACTCCACAGCCACCA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACATAAGTGCTCTGGATaGCCGGGAGGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGHKCSG*PGGWAP
Trigger: CGGAGCCCAGCCTCCCGGTCATCCAGAGCACTTATG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCATAAGTGCTCTGGATaGCCGGGAGGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGHKCSG*PGGWAP
Trigger: CGGAGCCCAGCCTCCCGGTCATCCAGAGCACTTATG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTCAGGAAGGCCAAAATaGCATGGCAGAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGSGRPK*HGRAPC
Trigger: ACAGGGAGCTCTGCCATGTCATTTTGGCCTTCCTGA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCTGCCGTTCTTTTTCTaGCAGGCTCTCAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGLPFFF*QALRCT
Trigger: GGTACACCTGAGAGCCTGGCAGAAAAAGAACGGCAG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTGCGCTGCCAGTAGCTaGTCCCGTAAACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHCAASS*SRKLIS
Trigger: GCTGATCAGTTTACGGGAGCAGCTACTGGCAGCGCA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCTCGCAATCTGTTCTTaGTGTTGGCGAGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGLAICS*CWRARS
Trigger: GGACCTTGCTCGCCAACAGCAAGAACAGATTGCGAG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGGCAGCAGCAGCTGCTaGCAGAGTCCGCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGGSSSC*QSPLVM
Trigger: CATGACCAGCGGACTCTGGCAGCAGCTGCTGCTGCC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGCAGCAGCAGCTGCTaGCAGAGTCCGCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGGSSSC*QSPLVM
Trigger: CATGACCAGCGGACTCTGGCAGCAGCTGCTGCTGCC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTTGGGCAGCAGCAGCTaGTGCCAGAGTCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGLGSSS*CQSPLV
Trigger: GACCAGCGGACTCTGGCAGCAGCTGCTGCTGCCCAA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCTGTTGCTGCTGTTaGTCCCGCTGGATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGGCCCC*SRWICS
Trigger: AGAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCCATGTGGCTGTTGCTaGTGTTGCTCCCGCTGGATC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGPCGCC*CCSRWI
Trigger: GATCCAGCGGGAGCAACAGCAGCAACAGCCACATGG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGACACCATGTGGCTGTTaGTGCTGTTGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGTPCGC*CCCSRW
Trigger: CCAGCGGGAGCAACAGCAGCAACAGCCACATGGTGT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGTCCCTGTAGACTCGTaGTTCAGCCACAGTGGCACC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGVPVDS*FSHSGT
Trigger: GGTGCCACTGTGGCTGAAGCACGAGTCTACAGGGAC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCGATGGTGTGGTAGTTaGCATAGTGATAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARRWCGS*HSDSTR
Trigger: CCTGGTGCTATCACTATGGCAACTACCACACCATCG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGCCGCAGGACTCTCCTaGCTGGCAGTCACCACTGTT +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPAAGLS*LAVTTV
Trigger: AACAGTGGTGACTGCCAGGCAGGAGAGTCCTGCGGC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGAGGAACTCATCTGCTaGCCCCGGAGCTATCTGTTC +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNEELIC*PRSYLF
Trigger: GAACAGATAGCTCCGGGGGCAGCAGATGAGTTCCTC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGAAGCAGCCTCAGCTGTaGTGTTCAAGTGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGKQPQL*CSSDQA
Trigger: AGCCTGGTCACTTGAACAGCACAGCTGAGGCTGCTT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGCCCACCCTTACCTCTaGCCCAAAGGTACCAGCATT +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQAHPYL*PKGTSI
Trigger: AATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGGCCACACCCAGTGTTaGTATAGGAACCAAAGCACA +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARGHTQC*YRNQST
Trigger: TGTGCTTTGGTTCCTATAGCAACACTGGGTGTGGCC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGTTTGTTGTGCATTATaGGGTGCAGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARVCCAL*GAEADG
Trigger: CCCATCTGCCTCTGCACCCCATAATGCACAACAAAC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCCCTTTGCGGCGCTCTaGGGTTCCAAAAGTAACACT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGPFAAL*GSKSNT
Trigger: AGTGTTACTTTTGGAACCCCAGAGCGCCGCAAAGGG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGCTGCCAGAGTCCGCTaGTCATGTGGAAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGAARVR*SCGKIG
Trigger: CCCAATTTTTCCACATGACCAGCGGACTCTGGCAGC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAAGAGGAATCCCTGTTaGGCAGCAGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGKRNPC*AAAAAA
Trigger: GGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGVTPAC*PAERHR
Trigger: TCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCAC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCAGGCTCTGCTGTCTTaGGTCGGGATGAGAGATTCA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGQALLS*VGMRDS
Trigger: TGAATCTCTCATCCCGACCCAAGACAGCAGAGCCTG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCTGGGTGGGAGACGTTaGGGACTTTACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLGGRR*GLYRLC
Trigger: GCAGAGCCTGTAAAGTCCCCAACGTCTCCCACCCAG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGGAAGAGGTTCTGGGTaGGAGACGTTGGGGACTTTA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGGRGSG*ETLGTL
Trigger: TAAAGTCCCCAACGTCTCCCACCCAGAACCTCTTCC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCAGGGCTGGTTTTGCTaGCTGGGAAGAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGQGWFC*LGRGSG
Trigger: CCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTGCTGTTGCTCCCGCTaGATCTGCTCTCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQCCCSR*ICSRIF
Trigger: GAAGATGCGAGAGCAGATCCAGCGGGAGCAACAGCA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTCCCTCTGCATCTTCTaGCCGAGTAAGGTCGATGAC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGSLCIF*PSKVDD
Trigger: GTCATCGACCTTACTCGGCCAGAAGATGCAGAGGGA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATGTGCTTCAGCCACAGTaGCACCTCCCTCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHVLQPQ*HLPLHL
Trigger: AAGATGCAGAGGGAGGTGCCACTGTGGCTGAAGCAC...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316399.10
ENST00000396356.7
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGGGTACTTCTCTAAGTaGATCTTGCTTAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGGYFSK*ILLSRA
Trigger: GGCCCGGCTAAGCAAGATCCACTTAGAGAAGTACCC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
52% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCAGGACTCTCCTGCCTaGCAGTCACCACTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQQDSPA*QSPLLN
Trigger: GTTCAACAGTGGTGACTGCCAGGCAGGAGAGTCCTG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCAGGACTCTCCTGCCTaGCAGTCACCACTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNQDSPA*QSPLLN
Trigger: GTTCAACAGTGGTGACTGCCAGGCAGGAGAGTCCTG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTCTGAGGCTGTCATGTaGCTTTTTGCATCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARSEAVM*LFASWG
Trigger: TCCCCAGGATGCAAAAAGCCACATGACAGCCTCAGA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACACTTGGCCTGGGCTTTaGTGTCAGGACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNTWPGL*CQDPGK
Trigger: TTTGCCAGGGTCCTGACACCAAAGCCCAGGCCAAGT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTGGGAGGCCACATGTTaGTCACTGCCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHWEATC*SLPSSF
Trigger: AAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGGTAGCTCCTCAGAGTaGGGTTTGTTGTGCATTATG +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARGSSSE*GLLCIM
Trigger: CATAATGCACAACAAACCTCACTCTGAGGAGCTACC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCATTCTTTGCTGAGATaGCAGAACGCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGHSLLR*QNAVPV
Trigger: GACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGAAAAATTGGGATCATaGGCGGAGGCATGTGACCCT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGEKLGS*AEACDP
Trigger: AGGGTCACATGCCTCCGCTCATGATCCCAATTTTTC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGAGCAGCTGCCATTGTTaGTGGAATGAACTGTACGGG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGSSCHC*WNELYG
Trigger: CCCGTACAGTTCATTCCATCAACAATGGCAGCTGCT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTGTGGGTGGGAGACATaGCCCTTCTGGAGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHCGWET*PFWSCK
Trigger: TTTACAGCTCCAGAAGGGTCATGTCTCCCACCCACA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316399.10
ENST00000396356.7
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTGGTGGCTGTGGAGTTaGTGGCATCTTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGWWLWS*WHLCSR
Trigger: CCTGGAGCAAAGATGCCATCAACTCCACAGCCACCA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTTTTATCCCAGTAGGTaGGACCGTCCCTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGFYPSR*DRPCCV
Trigger: AACACAGCAGGGACGGTCTCACCTACTGGGATAAAA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGATCTTCCGCGCCTCCTaGATGGCTTTCATCACTGTA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGIFRAS*MAFITV
Trigger: TACAGTGATGAAAGCCATTCAGGAGGCGCGGAAGAT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCACCTGTTCCTGTGGTaGTTGGAATCTGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGHLFLW*LESEAV
Trigger: AACAGCCTCAGATTCCAATCACCACAGGAACAGGTG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCATAAGTGCTCTGGATaGCCGGGAGGCTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCHKCSG*PGGWAP
Trigger: CGGAGCCCAGCCTCCCGGTCATCCAGAGCACTTATG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACTCCTCAGTTGGCACTaGCAGCCTCCGGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGLLSWH*QPPGLH
Trigger: ATGAAGCCCCGGAGGCTGTCAGTGCCAACTGAGGAG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCTCCTCAGTTGGCACTaGCAGCCTCCGGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGLLSWH*QPPGLH
Trigger: ATGAAGCCCCGGAGGCTGTCAGTGCCAACTGAGGAG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATCCGGCACAGCATACCTaGGTGAGAATGTTTAACCCC +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHPAQHT*VRMFNP
Trigger: GGGGTTAAACATTCTCACTCAGGTATGCTGTGCCGG...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTACCACATCACGCACTaGTGGCACGTCAACAGGCAA +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQYHITH*WHVNRQ
Trigger: TTGCCTGTTGACGTGCCATCAGTGCGTGATGTGGTA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGACTTGAGGTCACAGTaGACCTCAGGGGCATACCTG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGDLRSQ*TSGAYL
Trigger: CAGGTATGCCCCTGAGGTTCACTGTGACCTCAAGTC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGGCAGTCACCACTGTTaGACCTTGCTGCTGAATGGA +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQGSHHC*TLLLNG
Trigger: TCCATTCAGCAGCAAGGTTCAACAGTGGTGACTGCC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATGGCAGTCACCACTGTTaGACCTTGCTGCTGAATGGA +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHGSHHC*TLLLNG
Trigger: TCCATTCAGCAGCAAGGTTCAACAGTGGTGACTGCC...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTCAGGAAGGCCAAAATaGCATGGCAGAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHSGRPK*HGRAPC
Trigger: ACAGGGAGCTCTGCCATGTCATTTTGGCCTTCCTGA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGAATGAACCCCAGTACTaGGGCAGAGCTGGAGCTAAA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGNEPQY*GRAGAK
Trigger: TTTAGCTCCAGCTCTGCCTCAGTACTGGGGTTCATT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGCTGTGCTGTTCAAGTaGCCAGGCTGCCTTCCTACT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGAVLFK*PGCLPT
Trigger: AGTAGGAAGGCAGCCTGGTCACTTGAACAGCACAGC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCAAGAGCACCAGCACTaGGGCCTCACTTTATGCTTG +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQQEHQH*GLTLCL
Trigger: CAAGCATAAAGTGAGGCCTCAGTGCTGGTGCTCTTG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATCAAGAGCACCAGCACTaGGGCCTCACTTTATGCTTG +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHQEHQH*GLTLCL
Trigger: CAAGCATAAAGTGAGGCCTCAGTGCTGGTGCTCTTG...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAGGCTCCCTAGCAGTTaGGACTACAGGCACACACCA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGRLPSS*DYRHTP
Trigger: TGGTGTGTGCCTGTAGTCTCAACTGCTAGGGAGCCT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528252.5
CDS-3UTR TCA 90 bp GATTACCCACTTCTAGCCAAGACGGAGGCTGAATTTACCCTCCTTCAGAAAAATTACCCAGGGCTGCAGTaGGAGCAGAAGGGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: DYPLLAKTEAEFTLLQKNYPGLQ*EQKGGV
Trigger: CACTCCTCCCTTCTGCTCTCACTGCAGCCCTGGGTA...ATTTTTCTGAAGGAGGGTAAATTCAGCCTCCGTCTTGGCTAGAAGTGGGTAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGATCCTCTCCATCAGCTaGACAGGCAAATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGILSIS*TGKWRG
Trigger: ACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGAT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCGGCAAGACTCCCTTTaGGGCGCTCTGGGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGRQDSL*GALGFQ
Trigger: TTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACGGCAAGACTCCCTTTaGGGCGCTCTGGGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGRQDSL*GALGFQ
Trigger: TTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCTGCCGTTCTTTTTCTaGCAGGCTCTCAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQLPFFF*QALRCT
Trigger: GGTACACCTGAGAGCCTGGCAGAAAAAGAACGGCAG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGATCATGGTGGAGAGCTaGCGTTCTTTTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGIMVES*RSFSAR
Trigger: CCTGGCAGAAAAAGAACGGCAGCTCTCCACCATGAT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATCTCGCAATCTGTTCTTaGTGTTGGCGAGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHLAICS*CWRARS
Trigger: GGACCTTGCTCGCCAACAGCAAGAACAGATTGCGAG...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCTCGCAATCTGTTCTTaGTGTTGGCGAGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQLAICS*CWRARS
Trigger: GGACCTTGCTCGCCAACAGCAAGAACAGATTGCGAG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGGCAGCAGCAGCTGCTaGCAGAGTCCGCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCGSSSC*QSPLVM
Trigger: CATGACCAGCGGACTCTGGCAGCAGCTGCTGCTGCC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGAGATTCAGAGGCTGTaGTGCTGCTTCATCCTTAAC +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMAREIQRL*CCFILN
Trigger: GTTAAGGATGAAGCAGCAGCACAGCCTCTGAATCTC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGCTCCCGCTGGATCTaGTCTCGCATCTTCCGCGCC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCCSRWI*SRIFRA
Trigger: GGCGCGGAAGATGCGAGAGCAGATCCAGCGGGAGCA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTGCTCCCGCTGGATCTaGTCTCGCATCTTCCGCGCC +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWCSRWI*SRIFRA
Trigger: GGCGCGGAAGATGCGAGAGCAGATCCAGCGGGAGCA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCCATGTGGCTGTTGCTaGTGTTGCTCCCGCTGGATC +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPPCGCC*CCSRWI
Trigger: GATCCAGCGGGAGCAACAGCAGCAACAGCCACATGG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCATCAACAATGCAGGTaGGTTTCGGTCGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGHQQCR*VSVGVC
Trigger: ACAAACCCCGACCGAAACGCACCTGCATTGTTGATG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTTTTGCCATCAACAATaGAGGTGCGTTTCGGTCGGG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGFCHQQ*RCVSVG
Trigger: CCCGACCGAAACGCACCTGCATTGTTGATGGCAAAA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCGATGGTGTGGTAGTTaGCATAGTGATAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGRWCGS*HSDSTR
Trigger: CCTGGTGCTATCACTATGGCAACTACCACACCATCG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGATCTGGTGTGGCGGTTaGTCTGGTGTGTGTATGTCA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGIWCGG*SGVCMS
Trigger: TGACATACACACACCAGAGCAACCGCCACACCAGAT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTCTTGGTTTCAGAAATaGTTCCAGGCGTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARSWFQK*FQAFWG
Trigger: TCCCCAGAACGCCTGGAAGCATTTCTGAAACCAAGA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCCCAATACACAGCCCTaGAGCCAGATACATACTCAT +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARPNTQP*SQIHTH
Trigger: ATGAGTATGTATCTGGCTGCAGGGCTGTGTATTGGG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTATTTGCCACCATCTTTaGTCTGAGGCTGTCATGTGG +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARICHHL*SEAVMW
Trigger: CCACATGACAGCCTCAGAGCAAAGATGGTGGCAAAT...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTTTTTGGGAGAGGATTaGCTGGCAGTGTCCCAATTC +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARFLGED*LAVSQF
Trigger: GAATTGGGACACTGCCAGGCAATCCTCTCCCAAAAA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGGCCACACCCAGTGTTaGTATAGGAACCAAAGCACA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGGHTQC*YRNQST
Trigger: TGTGCTTTGGTTCCTATAGCAACACTGGGTGTGGCC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TCCTTCAGAAAAATGTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTTGTTCGTGGGAGTGCCAGTCTaGGTACACCTTCACCGCGTC +
Preference number: 4 (lower is better)
Translates to: SFRKMLNIVVTVGSLALFVGVPV*VHLHRV
Trigger: GACGCGGTGAAGGTGTACGCAGACTGGCACTCCCAC...GAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAACATTTTTCTGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGTTTGTTGTGCATTATaGGGTGCAGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGVCCAL*GAEADG
Trigger: CCCATCTGCCTCTGCACCCCATAATGCACAACAAAC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGGAAGAGGTTCTGGGTaGGAGACGTTGGGGACTTTA +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQGRGSG*ETLGTL
Trigger: TAAAGTCCCCAACGTCTCCCACCCAGAACCTCTTCC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGCTGGTTTTGCTGGCTaGGAAGAGGTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPAGFAG*EEVLGG
Trigger: CCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCAGGGCTGGTTTTGCTaGCTGGGAAGAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPQGWFC*LGRGSG
Trigger: CCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGACTTTCCCGTTAACTaGGGCCCCAAATTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARDFPVN*GPKFSK
Trigger: CTTTGAGAATTTGGGGCCCCAGTTAACGGGAAAGTC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTCCCTCTGCATCTTCTaGCCGAGTAAGGTCGATGAC +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNSLCIF*PSKVDD
Trigger: GTCATCGACCTTACTCGGCCAGAAGATGCAGAGGGA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGTGCTTCAGCCACAGTaGCACCTCCCTCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGVLQPQ*HLPLHL
Trigger: AAGATGCAGAGGGAGGTGCCACTGTGGCTGAAGCAC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316399.10
ENST00000396356.7
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTGGTCGCTTAATGTGTaGCTCGCTGCTGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGWSLNV*LAAGTA
Trigger: GGCCGTGCCAGCAGCGAGCCACACATTAAGCGACCA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGGGTACTTCTCTAAGTaGATCTTGCTTAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNGYFSK*ILLSRA
Trigger: GGCCCGGCTAAGCAAGATCCACTTAGAGAAGTACCC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGGGTACTTCTCTAAGTaGATCTTGCTTAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQGYFSK*ILLSRA
Trigger: GGCCCGGCTAAGCAAGATCCACTTAGAGAAGTACCC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGGATGTAGTGAGAGGTaGTCTCAGGCAGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNGCSER*SQAEKT
Trigger: GGTCTTCTCTGCCTGAGACCACCTCTCACTACATCC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACTTGGGCTTCAGGTTTaGCCGCAGGACTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGLGLQV*PQDSPA
Trigger: GGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCCTAGATGTGCCAGCTaGGACAAGGCAACTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQPRCAS*DKATQC
Trigger: ACACTGAGTTGCCTTGTCCCAGCTGGCACATCTAGG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 72 bp CAGAGAAGACCACTCTGTCGATATCTGGTGTGGCGGTaGCTCTGGTGTGTGTATGTCATACCACATCACGCA +
Preference number: 4 (lower is better)
Translates to: QRRPLCRYLVWR*LWCVYVIPHHA
Trigger: TGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCACACCAGATATCGACAGAGTGGTCTTCTCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGGTAGCTCCTCAGAGTaGGGTTTGTTGTGCATTATG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGGSSSE*GLLCIM
Trigger: CATAATGCACAACAAACCTCACTCTGAGGAGCTACC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCATTCTTTGCTGAGATaGCAGAACGCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQHSLLR*QNAVPV
Trigger: GACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGATTCCATTCTTTGCTaGGATGACAGAACGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGDSILC*DDRTLS
Trigger: GGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACAGCAGCTGCCATTGTTaGTGGAATGAACTGTACGGG +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNSSCHC*WNELYG
Trigger: CCCGTACAGTTCATTCCATCAACAATGGCAGCTGCT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATCAGTCAGATGTCATCTaGGGCGATGGTGTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHQSDVI*GDGVVV
Trigger: AACTACCACACCATCGCCTCAGATGACATCTGACTG...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCTCCTCAGTTGGCACTaGCAGCCTCCGGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCLLSWH*QPPGLH
Trigger: ATGAAGCCCCGGAGGCTGTCAGTGCCAACTGAGGAG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCTCCTCAGTTGGCACTaGCAGCCTCCGGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWLLSWH*QPPGLH
Trigger: ATGAAGCCCCGGAGGCTGTCAGTGCCAACTGAGGAG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTACCACATCACGCACTaGTGGCACGTCAACAGGCAA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGYHITH*WHVNRQ
Trigger: TTGCCTGTTGACGTGCCATCAGTGCGTGATGTGGTA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTTCTGGCAAAAGACTTaGGGTCACAGTGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGFWQKT*GHSEPQ
Trigger: CTGAGGTTCACTGTGACCTCAAGTCTTTTGCCAGAA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCAGTCACCACTGTTaGACCTTGCTGCTGAATGGA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGGSHHC*TLLLNG
Trigger: TCCATTCAGCAGCAAGGTTCAACAGTGGTGACTGCC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGGTTGTCCCATGAGGTaGACTATCCCATTCACTGAC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQGCPMR*TIPFTD
Trigger: GTCAGTGAATGGGATAGTTCACCTCATGGGACAACC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGATTCCTATGTCCTGGTaGTCAGATTCTGGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGIPMSW*SDSGLS
Trigger: GGACAACCCAGAATCTGATCACCAGGACATAGGAAT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACAAATCCGGCAACTGTaGGGCAAGCCCACACGAGTC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGQIRQL*GKPTRV
Trigger: GACTCGTGTGGGCTTGCCTCACAGTTGCCGGATTTG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTACTCCCAAAGCAAACTaGCTGTCTCCTAACTGTAGT +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARTPKAN*LSPNCS
Trigger: ACTACAGTTAGGAGACAGTCAGTTTGCTTTGGGAGT...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTATTTCAGCCCTAGAGTaGTCACGCCCTTTTCAAACA +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARISALE*SRPFQT
Trigger: TGTTTGAAAAGGGCGTGATCACTCTAGGGCTGAAAT...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGCTGTGCTGTTCAAGTaGCCAGGCTGCCTTCCTACT +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPAVLFK*PGCLPT
Trigger: AGTAGGAAGGCAGCCTGGTCACTTGAACAGCACAGC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATAAGGGAGAATGCACATaGGCAGACCTGCAATGTGCA +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHKGECT*ADLQCA
Trigger: TGCACATTGCAGGTCTGCTCATGTGCATTCTCCCTT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTGCACAGGCTGGCCTTaGACTCCTGTGCTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGCTGWP*TPVLKE
Trigger: CTCCTTGAGCACAGGAGTTCAAGGCCAGCCTGTGCA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528252.5
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCCACATGTTGATCACTaGCCTCTTCCTTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGPHVDH*PLPFPL
Trigger: CAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCTGCCGTTCTTTTTCTaGCAGGCTCTCAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLPFFF*QALRCT
Trigger: GGTACACCTGAGAGCCTGGCAGAAAAAGAACGGCAG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCTCGCAATCTGTTCTTaGTGTTGGCGAGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLAICS*CWRARS
Trigger: GGACCTTGCTCGCCAACAGCAAGAACAGATTGCGAG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCAGGTGACACCTGCATaGTGGCCAGCTGAGCGGCAT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWQVTPA*WPAERH
Trigger: ATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCAGAGGCTGTGCTGCTaGTTCATCCTTAACTTGAGT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGQRLCC*FILNLS
Trigger: ACTCAAGTTAAGGATGAAGCAGCAGCACAGCCTCTG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGAGATTCAGAGGCTGTaGTGCTGCTTCATCCTTAAC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGEIQRL*CCFILN
Trigger: GTTAAGGATGAAGCAGCAGCACAGCCTCTGAATCTC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGCTGTTGCTGCTGTTaGTCCCGCTGGATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGGCCCC*SRWICS
Trigger: AGAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGGCTGTTGCTGCTGTTaGTCCCGCTGGATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGGCCCC*SRWICS
Trigger: AGAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACACCATGTGGCTGTTaGTGCTGTTGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGTPCGC*CCCSRW
Trigger: CCAGCGGGAGCAACAGCAGCAACAGCCACATGGTGT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAACACCATGTGGCTGTTaGTGCTGTTGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGTPCGC*CCCSRW
Trigger: CCAGCGGGAGCAACAGCAGCAACAGCCACATGGTGT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGTCCCTGTAGACTCGTaGTTCAGCCACAGTGGCACC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGVPVDS*FSHSGT
Trigger: GGTGCCACTGTGGCTGAAGCACGAGTCTACAGGGAC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTCTCTAAGTGGATCTTaGTTAGCCGGGCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHSLSGS*LAGPAL
Trigger: AAGAGCAGGCCCGGCTAAGCAAGATCCACTTAGAGA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATCATCAACAATGCAGGTaGGTTTCGGTCGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHHQQCR*VSVGVC
Trigger: ACAAACCCCGACCGAAACGCACCTGCATTGTTGATG...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTTTTGCCATCAACAATaGAGGTGCGTTTCGGTCGGG +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQFCHQQ*RCVSVG
Trigger: CCCGACCGAAACGCACCTGCATTGTTGATGGCAAAA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTTTTGCCATCAACAATaGAGGTGCGTTTCGGTCGGG +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNFCHQQ*RCVSVG
Trigger: CCCGACCGAAACGCACCTGCATTGTTGATGGCAAAA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCGAGACCTCATCAGTTaGTTATACTCCCCAATCCGA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGRDLIS*LYSPIR
Trigger: TCGGATTGGGGAGTATAAGCAACTGATGAGGTCTCG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATCGATGGTGTGGTAGTTaGCATAGTGATAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHRWCGS*HSDSTR
Trigger: CCTGGTGCTATCACTATGGCAACTACCACACCATCG...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGATTTGCCACCATCTTTaGTCTGAGGCTGTCATGTGG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGICHHL*SEAVMW
Trigger: CCACATGACAGCCTCAGAGCAAAGATGGTGGCAAAT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCTGCAGGCCAAACACTaGTCTCTCACTGTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNLQAKH*SLTVAD
Trigger: ATCAGCTACAGTGAGAGAGCAGTGTTTGGCCTGCAG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTTTTGCTGTCCCAGCTaGAGGCCAAACACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGFCCPS*RPNTAL
Trigger: GAGAGCAGTGTTTGGCCTGCAGCTGGGACAGCAAAA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGTTTGTTGTGCATTATaGGGTGCAGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNVCCAL*GAEADG
Trigger: CCCATCTGCCTCTGCACCCCATAATGCACAACAAAC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGATCTGTTCTTGCTGTTaGCGAGCAAGGTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGICSCC*RARSIC
Trigger: GCAAATGGACCTTGCTCGCCAACAGCAAGAACAGAT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGTCATGTGGAAAAATTaGGATCATGAGCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARVMWKN*DHERRH
Trigger: ATGCCTCCGCTCATGATCCCAATTTTTCCACATGAC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGCTGCCAGAGTCCGCTaGTCATGTGGAAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGAARVR*SCGKIG
Trigger: CCCAATTTTTCCACATGACCAGCGGACTCTGGCAGC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAGAGGAATCCCTGTTaGGCAGCAGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGKRNPC*AAAAAA
Trigger: GGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAAGAGGAATCCCTGTTaGGCAGCAGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGKRNPC*AAAAAA
Trigger: GGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGVTPAC*PAERHR
Trigger: TCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCAC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCAGGCTCTGCTGTCTTaGGTCGGGATGAGAGATTCA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGQALLS*VGMRDS
Trigger: TGAATCTCTCATCCCGACCCAAGACAGCAGAGCCTG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGAAGAGGTTCTGGGTaGGAGACGTTGGGGACTTTA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGGRGSG*ETLGTL
Trigger: TAAAGTCCCCAACGTCTCCCACCCAGAACCTCTTCC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGCTGGGAAGAGGTTCTaGGTGGGAGACGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCAGKRF*VGDVGD
Trigger: GTCCCCAACGTCTCCCACCCAGAACCTCTTCCCAGC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGCTGGTTTTGCTGGCTaGGAAGAGGTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGAGFAG*EEVLGG
Trigger: CCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACAGGGCTGGTTTTGCTaGCTGGGAAGAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGQGWFC*LGRGSG
Trigger: CCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTCCGCGCCTCCTGAATaGCTTTCATCACTGTATCCT +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNSAPPE*LSSLYP
Trigger: AGGATACAGTGATGAAAGCCATTCAGGAGGCGCGGA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGACTTTCCCGTTAACTaGGGCCCCAAATTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGDFPVN*GPKFSK
Trigger: CTTTGAGAATTTGGGGCCCCAGTTAACGGGAAAGTC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGAAGGTCGATGACACCTaGGCCCAGTTTTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQKVDDT*AQFSIF
Trigger: GAAGATGGAAAACTGGGCCCAGGTGTCATCGACCTT...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGTACTTCTCTAAGTaGATCTTGCTTAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGGYFSK*ILLSRA
Trigger: GGCCCGGCTAAGCAAGATCCACTTAGAGAAGTACCC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTGTCATCTGAGGCGATaGTGTGGTAGTTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGCHLRR*CGSCHS
Trigger: ACTATGGCAACTACCACACCATCGCCTCAGATGACA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATCAGCTGCACACGCCGTaGACTTGTTCTGTTTCACAA +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHQLHTP*TCSVSQ
Trigger: TTGTGAAACAGAACAAGTCCACGGCGTGTGCAGCTG...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGACAGGCAAACACAATTaGGTCCATGCACTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGTGKHN*VHALWQ
Trigger: TTGCCACAGTGCATGGACCCAATTGTGTTTGCCTGT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCAGGACTCTCCTGCCTaGCAGTCACCACTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPQDSPA*QSPLLN
Trigger: GTTCAACAGTGGTGACTGCCAGGCAGGAGAGTCCTG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCTTGGGCTTCAGGTTTaGCCGCAGGACTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCLGLQV*PQDSPA
Trigger: GGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTATGGCCCACGAGCCTTaGGCTTCAGGTTTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCMAHEP*ASGLAA
Trigger: TGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCCAT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTAAATGTCTGGATCTGTaGACAGTGGGTTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARKCLDL*TVGSEL
Trigger: CAGTTCAGAACCCACTGTCCACAGATCCAGACATTT...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGGCCGATCTCAGAGGTaGATTTTTGCCTTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGGRSQR*IFAFVV
Trigger: CACTACAAAGGCAAAAATCCACCTCTGAGATCGGCC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTTGGTGTCAGGACCCTaGCAAATCAAATCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHLVSGP*QIKSGL
Trigger: CAGGCCTGATTTGATTTGCCAGGGTCCTGACACCAA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTTGGTGTCAGGACCCTaGCAAATCAAATCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQLVSGP*QIKSGL
Trigger: CAGGCCTGATTTGATTTGCCAGGGTCCTGACACCAA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGTGCTTCAGCCACAGTaGCACCTCCTGTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGVLQPQ*HLLLAN
Trigger: GTTGGCCAACAGGAGGTGCCACTGTGGCTGAAGCAC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGGTAGCTCCTCAGAGTaGGGTTTGTTGTGCATTATG +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNGSSSE*GLLCIM
Trigger: CATAATGCACAACAAACCTCACTCTGAGGAGCTACC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAGTCAGCATCTTGTTaGATGGTACTGACAAGTGTT +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARQSASC*MVLTSV
Trigger: AACACTTGTCAGTACCATTCAACAAGATGCTGACTG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCATTCTTTGCTGAGATaGCAGAACGCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGHSLLR*QNAVPV
Trigger: GACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGATTCCATTCTTTGCTaGGATGACAGAACGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQDSILC*DDRTLS
Trigger: GGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGAAAAATTGGGATCATaGGCGGAGGCATGTGACCCT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGEKLGS*AEACDP
Trigger: AGGGTCACATGCCTCCGCTCATGATCCCAATTTTTC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAGCAGCTGCCATTGTTaGTGGAATGAACTGTACGGG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGSSCHC*WNELYG
Trigger: CCCGTACAGTTCATTCCATCAACAATGGCAGCTGCT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATGGTGGCTGTGGAGTTaGTGGCATCTTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGWWLWS*WHLCSR
Trigger: CCTGGAGCAAAGATGCCATCAACTCCACAGCCACCA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTTTTATCCCAGTAGGTaGGACCGTCCCTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGFYPSR*DRPCCV
Trigger: AACACAGCAGGGACGGTCTCACCTACTGGGATAAAA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGCTTCATCCTTAACTTaGGTTACAGGGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGASSLT*VTGLVP
Trigger: AGGGACCAGCCCTGTAACTCAAGTTAAGGATGAAGC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTTCATCACTGTATCCTaGTCCCCAAAAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGFITVS*SPKRAG
Trigger: CCCTGCCCTTTTTGGGGATCAGGATACAGTGATGAA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGATCTTCCGCGCCTCCTaGATGGCTTTCATCACTGTA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGIFRAS*MAFITV
Trigger: TACAGTGATGAAAGCCATTCAGGAGGCGCGGAAGAT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGTGGTGATTGGAATCTaGGGCTGTTGCCCCACAGTA +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPVVIGI*GCCPTV
Trigger: TACTGTGGGGCAACAGCCTCAGATTCCAATCACCAC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCACCTGTTCCTGTGGTaGTTGGAATCTGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGHLFLW*LESEAV
Trigger: AACAGCCTCAGATTCCAATCACCACAGGAACAGGTG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCAGTCAGATGTCATCTaGGGCGATGGTGTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGQSDVI*GDGVVV
Trigger: AACTACCACACCATCGCCTCAGATGACATCTGACTG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCACAGCATACCTGAGTaGGAATGTTTAACCCCATCT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGHSIPE*ECLTPS
Trigger: AGATGGGGTTAAACATTCTCACTCAGGTATGCTGTG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTTGTCTCCAGATTCCTaGGTACCTTACCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARLSPDS*VPYHFL
Trigger: CAGAAAATGGTAAGGTACTCAGGAATCTGGAGACAA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATGTTGAACCTTGCTGCTaGATGGAATTCAGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHVEPCC*MEFRGK
Trigger: TTTCCCCCTGAATTCCATTCAGCAGCAAGGTTCAAC...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAAGGGAGAATGCACATaGGCAGACCTGCAATGTGCA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGKGECT*ADLQCA
Trigger: TGCACATTGCAGGTCTGCTCATGTGCATTCTCCCTT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGATCAAGAGGAGAGTGTaGGAAAGATGTGATGGCAAC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGIKRRV*ERCDGN
Trigger: GTTGCCATCACATCTTTCTCACACTCTCCTCTTGAT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GAGGACTACTGGATCAAAAGAAAGTGTATATGTTGTTTTGACAGATGCTGTGAACCACACAGCGCGAATTaGGCCTCGGGGCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: EDYWIKRKCICCFDRCCEPHSAN*ASGLPG
Trigger: CCCAGGAAGCCCCGAGGCTCAATTCGCGCTGTGTGG...TTCACAGCATCTGTCAAAACAACATATACACTTTCTTTTGATCCAGTAGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGATCCTCTCCATCAGCTaGACAGGCAAATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGILSIS*TGKWRG
Trigger: ACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGAT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGATCATGGTGGAGAGCTaGCGTTCTTTTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGIMVES*RSFSAR
Trigger: CCTGGCAGAAAAAGAACGGCAGCTCTCCACCATGAT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATGCGCTGCCAGTAGCTaGTCCCGTAAACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGCAASS*SRKLIS
Trigger: GCTGATCAGTTTACGGGAGCAGCTACTGGCAGCGCA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTGCGCTGCCAGTAGCTaGTCCCGTAAACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGCAASS*SRKLIS
Trigger: GCTGATCAGTTTACGGGAGCAGCTACTGGCAGCGCA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCAGAGGCTGTGCTGCTaGTTCATCCTTAACTTGAGT +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNQRLCC*FILNLS
Trigger: ACTCAAGTTAAGGATGAAGCAGCAGCACAGCCTCTG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGATTCAGAGGCTGTGCTaGTGCTTCATCCTTAACTTG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGIQRLC*CFILNL
Trigger: CAAGTTAAGGATGAAGCAGCAGCACAGCCTCTGAAT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCCATGTGGCTGTTGCTaGTGTTGCTCCCGCTGGATC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCPCGCC*CCSRWI
Trigger: GATCCAGCGGGAGCAACAGCAGCAACAGCCACATGG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGTGGCACCTCCCTCTaGATCTTCTGGCCGAGTAAG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGSGTSL*IFWPSK
Trigger: CTTACTCGGCCAGAAGATGCAGAGGGAGGTGCCACT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316399.10
ENST00000396356.7
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGTCCCTGTAGACTCGTaGTTCAGCCACAGTGGCACC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCVPVDS*FSHSGT
Trigger: GGTGCCACTGTGGCTGAAGCACGAGTCTACAGGGAC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTCTCTAAGTGGATCTTaGTTAGCCGGGCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGSLSGS*LAGPAL
Trigger: AAGAGCAGGCCCGGCTAAGCAAGATCCACTTAGAGA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTTTTGCCATCAACAATaGAGGTGCGTTTCGGTCGGG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGFCHQQ*RCVSVG
Trigger: CCCGACCGAAACGCACCTGCATTGTTGATGGCAAAA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCGAGACCTCATCAGTTaGTTATACTCCCCAATCCGA +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQRDLIS*LYSPIR
Trigger: TCGGATTGGGGAGTATAAGCAACTGATGAGGTCTCG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCCCACAGTAAAGAACTaGCTCATCTCCTGTCTCCGA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGPTVKN*LISCLR
Trigger: TCGGAGACAGGAGATGAGGCAGTTCTTTACTGTGGG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGGAGCCACAAATGCATaGGGGCTCTTTAATAACTCT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGGATNA*GLFNNS
Trigger: AGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACATTTGCCACCATCTTTaGTCTGAGGCTGTCATGTGG +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNICHHL*SEAVMW
Trigger: CCACATGACAGCCTCAGAGCAAAGATGGTGGCAAAT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACCTGGTGAAACGTTTTaGTGTCCCAGCTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGPGETF*CPSCRP
Trigger: TGGCCTGCAGCTGGGACAGCAAAACGTTTCACCAGG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTAAGCAGCCTCAGCTGTaGTGTTCAAGTGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPKQPQL*CSSDQA
Trigger: AGCCTGGTCACTTGAACAGCACAGCTGAGGCTGCTT...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGCCCACCCTTACCTCTaGCCCAAAGGTACCAGCATT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGAHPYL*PKGTSI
Trigger: AATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCTCAAGGAGTCTTCCTaGCTCAGGCTCCCTAGCAGT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGLKESS*LRLPSS
Trigger: ACTGCTAGGGAGCCTGAGGCAGGAAGACTCCTTGAG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528252.5
CDS-3UTR GCA 90 bp AGACTTATAATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACCTACAACTCCCAAAGTaGCCCGGGGCGGCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RLIITSMPSKIEYLFLHNLQLPK*PGAARG
Trigger: GCCCCTCGCCGCCCCGGGGCACTTTGGGAGTTGTAG...GTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTATTATAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGAGAGGTGGCTTGCTTaGAAGACATTCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQERWLA*KTFFCR
Trigger: TCTGCAGAAGAATGTCTTCCAAGCAAGCCACCTCTC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316399.10
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCTTGAGGTTAAATCCTaGGTCATTGCATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGLEVKS*VIASSP
Trigger: TGGAGAGGATGCAATGACCCAGGATTTAACCTCAAG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCCCTTTGCGGCGCTCTaGGGTTCCAAAAGTAACACT +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPPFAAL*GSKSNT
Trigger: AGTGTTACTTTTGGAACCCCAGAGCGCCGCAAAGGG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ATGTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTTGTTCCTGATCTTAAGGCCCTTTGCGGCGCTCTaGGGTTCCAAAAGTAACACT +
Preference number: 4 (lower is better)
Translates to: MLNIVVTVGSLALFLILRPFAAL*GSKSNT
Trigger: AGTGTTACTTTTGGAACCCCAGAGCGCCGCAAAGGG...CCTTAAGATCAGGAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGATCTGTTCTTGCTGTTaGCGAGCAAGGTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQICSCC*RARSIC
Trigger: GCAAATGGACCTTGCTCGCCAACAGCAAGAACAGAT...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGTCATGTGGAAAAATTaGGATCATGAGCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGVMWKN*DHERRH
Trigger: ATGCCTCCGCTCATGATCCCAATTTTTCCACATGAC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGAAGAGGAATCCCTGTTaGGCAGCAGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWKRNPC*AAAAAA
Trigger: GGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTT...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTAAGAGGAATCCCTGTTaGGCAGCAGCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCKRNPC*AAAAAA
Trigger: GGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGGGGTAGTTATCACCTaGTTTGTATGTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARGVVIT*FVCYSR
Trigger: CCTGGAATAACATACAAACCAGGTGATAACTACCCC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACAGGCCCTTTAGCCTTTaGTTAATTTGTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNRPFSL*LICGWE
Trigger: CTCCCACCCACAAATTAACCAAAGGCTAAAGGGCCT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316399.10
ENST00000396356.7
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCVTPAC*PAERHR
Trigger: TCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCAC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCTGGGTGGGAGACGTTaGGGACTTTACAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWLGGRR*GLYRLC
Trigger: GCAGAGCCTGTAAAGTCCCCAACGTCTCCCACCCAG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCAGGGCTGGTTTTGCTaGCTGGGAAGAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCQGWFC*LGRGSG
Trigger: CCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCAGGGCTGGTTTTGCTaGCTGGGAAGAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWQGWFC*LGRGSG
Trigger: CCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTCCGCGCCTCCTGAATaGCTTTCATCACTGTATCCT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGSAPPE*LSSLYP
Trigger: AGGATACAGTGATGAAAGCCATTCAGGAGGCGCGGA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATGCTGTTGCTCCCGCTaGATCTGCTCTCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGCCCSR*ICSRIF
Trigger: GAAGATGCGAGAGCAGATCCAGCGGGAGCAACAGCA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAAGGTCGATGACACCTaGGCCCAGTTTTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGKVDDT*AQFSIF
Trigger: GAAGATGGAAAACTGGGCCCAGGTGTCATCGACCTT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTGTCATCTGAGGCGATaGTGTGGTAGTTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQCHLRR*CGSCHS
Trigger: ACTATGGCAACTACCACACCATCGCCTCAGATGACA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTGGGTCCATGCACTGTaGCAACCTTGTTCATTCCTT +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQWVHAL*QPCSFL
Trigger: AAGGAATGAACAAGGTTGCCACAGTGCATGGACCCA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTGGGTCCATGCACTGTaGCAACCTTGTTCATTCCTT +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNWVHAL*QPCSFL
Trigger: AAGGAATGAACAAGGTTGCCACAGTGCATGGACCCA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTGTCGATATCTGGTGTaGCGGTTGCTCTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPCRYLV*RLLWCV
Trigger: CACACACCAGAGCAACCGCCACACCAGATATCGACA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCACTCTGTCGATATCTaGTGTGGCGGTTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPHSVDI*CGGCSG
Trigger: ACCAGAGCAACCGCCACACCAGATATCGACAGAGTG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGGCCGATCTCAGAGGTaGATTTTTGCCTTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNGRSQR*IFAFVV
Trigger: CACTACAAAGGCAAAAATCCACCTCTGAGATCGGCC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGGCCGATCTCAGAGGTaGATTTTTGCCTTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQGRSQR*IFAFVV
Trigger: CACTACAAAGGCAAAAATCCACCTCTGAGATCGGCC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTTGGTGTCAGGACCCTaGCAAATCAAATCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLVSGP*QIKSGL
Trigger: CAGGCCTGATTTGATTTGCCAGGGTCCTGACACCAA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCCTGAATTTAGAACTTaGCCTGGGCTTTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQPEFRT*PGLWCQ
Trigger: CTGACACCAAAGCCCAGGCCAAGTTCTAAATTCAGG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATCCTGAATTTAGAACTTaGCCTGGGCTTTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHPEFRT*PGLWCQ
Trigger: CTGACACCAAAGCCCAGGCCAAGTTCTAAATTCAGG...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGCAGTTGTTGGCACTTaGTACAGGACTTCTCATATG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGAVVGT*YRTSHM
Trigger: CATATGAGAAGTCCTGTACCAAGTGCCAACAACTGC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTTTCTTTGCAGTTGTTaGCACTTGGTACAGGACTTC +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARFLCSC*HLVQDF
Trigger: GAAGTCCTGTACCAAGTGCCAACAACTGCAAAGAAA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATAGTGGCACCTCCTGTTaGCCAACAATAATACTGCTG +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHSGTSC*PTIILL
Trigger: CAGCAGTATTATTGTTGGCCAACAGGAGGTGCCACT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGTGCTTCAGCCACAGTaGCACCTCCTGTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWVLQPQ*HLLLAN
Trigger: GTTGGCCAACAGGAGGTGCCACTGTGGCTGAAGCAC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGAGAGGTGGCTTGCTTaGAAGACATTCTTCCCATTT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGERWLA*KTFFPF
Trigger: AAATGGGAAGAATGTCTTCCAAGCAAGCCACCTCTC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527619.6
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATGGGAGGCCACATGTTaGTCACTGCCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGWEATC*SLPSSF
Trigger: AAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCTTGTTGAATGGTACTaGCAAGTGTTGGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQLVEWY*QVLVAP
Trigger: AGGAGCTACCAACACTTGTCAGTACCATTCAACAAG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCAGTCAGCATCTTGTTaGATGGTACTGACAAGTGTT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGQSASC*MVLTSV
Trigger: AACACTTGTCAGTACCATTCAACAAGATGCTGACTG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTTGTTCCTGATCTTAAGGGAGATTCCATTCTTTGCTaGGATGACAGAACGCTGTCC +
Preference number: 4 (lower is better)
Translates to: VEYSGDSGQLGLVPDLKGDSILC*DDRTLS
Trigger: GGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATC...TCCCTTAAGATCAGGAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATGTGGGTGGGAGACATaGCCCTTCTGGAGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGCGWET*PFWSCK
Trigger: TTTACAGCTCCAGAAGGGTCATGTCTCCCACCCACA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528429.5
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGTGGTGATTGGAATCTaGGGCTGTTGCCCCACAGTA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGVVIGI*GCCPTV
Trigger: TACTGTGGGGCAACAGCCTCAGATTCCAATCACCAC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGTGGTGATTGGAATCTaGGGCTGTTGCCCCACAGTA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGVVIGI*GCCPTV
Trigger: TACTGTGGGGCAACAGCCTCAGATTCCAATCACCAC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGAAGACATCTACGGGTTaGGATAAGTTTCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGKTSTG*DKFQVL
Trigger: CAGGACTTGAAACTTATCTCAACCCGTAGATGTCTT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGACTTGAGGTCACAGTaGACCTCAGGGGCATACCTG +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWDLRSQ*TSGAYL
Trigger: CAGGTATGCCCCTGAGGTTCACTGTGACCTCAAGTC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCTACCACTTGTGAACTaGATTAGGGGAAAATTCTGG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGLPLVN*IRGKFW
Trigger: CCAGAATTTTCCCCTAATTCAGTTCACAAGTGGTAG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTCAGGAAGGCCAAAATaGCATGGCAGAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGSGRPK*HGRAPC
Trigger: ACAGGGAGCTCTGCCATGTCATTTTGGCCTTCCTGA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTTCTGGGTTGTCCCATaGGGTGAACTATCCCATTCA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGFWVVP*GELSHS
Trigger: TGAATGGGATAGTTCACCTCATGGGACAACCCAGAA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGATGGCTCAAGAAATCTaGTGGGGCCATTCCTATGTC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGMAQEI*WGHSYV
Trigger: GACATAGGAATGGCCCCATCAGATTTCTTGAGCCAT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACATGGCTAAAAGTAAATaGACCCCAGTACTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNMAKSK*TPVLRQ
Trigger: CTGCCTCAGTACTGGGGTTCATTTACTTTTAGCCAT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATACTCCCAAAGCAAACTaGCTGTCTCCTAACTGTAGT +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHTPKAN*LSPNCS
Trigger: ACTACAGTTAGGAGACAGTCAGTTTGCTTTGGGAGT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGATTTGAAGATACTATaGAATAGGGAGCACCGCAAA +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARDLKIL*NREHRK
Trigger: TTTGCGGTGCTCCCTATTTCATAGTATCTTCAAATC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAAATCAAATCAGGCCTaGGGACAAGGCTGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGKSNQA*GQGWRV
Trigger: TACTCTCCAGCCTTGTCCTCAGGCCTGATTTGATTT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTATTGCCATGGACACTaGTTAGAAGAGTTATCTGCA +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARYCHGH*LEELSA
Trigger: TGCAGATAACTCTTCTAATCAGTGTCCATGGCAATA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGACAAACTTTACACTTTaGAACAGCAGCCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGTNFTL*NSSQHV
Trigger: GACATGCTGGCTGCTGTTTCAAAGTGTAAAGTTTGT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGAGTGTGAGAAAGATGTaGTGGCAACCCTTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQSVRKM*WQPLRS
Trigger: TGACCTTAAGGGTTGCCATCACATCTTTCTCACACT...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGATCAAGAGGAGAGTGTaGGAAAGATGTGATGGCAAC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQIKRRV*ERCDGN
Trigger: GTTGCCATCACATCTTTCTCACACTCTCCTCTTGAT...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCACTCCTGTTTCACCTaGCTAAACTGTAGGTATTTG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGHSCFT*LNCRYL
Trigger: CAAATACCTACAGTTTAGTCAGGTGAAACAGGAGTG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527619.6
ENST00000655819.1
CDS-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTATCCTCTCCATCAGCTaGACAGGCAAATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPILSIS*TGKWRG
Trigger: ACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGAT...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCCACATGTTGATCACTaGCCTCTTCCTTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGPHVDH*PLPFPL
Trigger: CAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCTGCCGTTCTTTTTCTaGCAGGCTCTCAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGLPFFF*QALRCT
Trigger: GGTACACCTGAGAGCCTGGCAGAAAAAGAACGGCAG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACTGCCGTTCTTTTTCTaGCAGGCTCTCAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGLPFFF*QALRCT
Trigger: GGTACACCTGAGAGCCTGGCAGAAAAAGAACGGCAG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGCGCTGCCAGTAGCTaGTCCCGTAAACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCCAASS*SRKLIS
Trigger: GCTGATCAGTTTACGGGAGCAGCTACTGGCAGCGCA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACTCGCAATCTGTTCTTaGTGTTGGCGAGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGLAICS*CWRARS
Trigger: GGACCTTGCTCGCCAACAGCAAGAACAGATTGCGAG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTAGGAGATTAATTTTGTaGTGCTGTTGCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARRRLIL*CCCRSC
Trigger: GCAACTTCTGCAACAGCAGCACAAAATTAATCTCCT...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAGGTGTCCAAATTCCTaGCAAAACGGTCACTTAGGC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGRCPNS*QNGHLG
Trigger: GCCTAAGTGACCGTTTTGGCAGGAATTTGGACACCT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528429.5
CDS-3UTR GCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATATTCAGAGGCTGTGCTaGTGCTTCATCCTTAACTTG +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHIQRLC*CFILNL
Trigger: CAAGTTAAGGATGAAGCAGCAGCACAGCCTCTGAAT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCAATCCGAAGCTTTTTaGCATCAACAATGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNQSEAF*HQQCRC
Trigger: GCACCTGCATTGTTGATGGCAAAAAGCTTCGGATTG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGGGCTTCATTTTCACTaGTATAGTCTGATTTGGGGT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGGLHFH*YSLIWG
Trigger: ACCCCAAATCAGACTATAGCAGTGAAAATGAAGCCC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
48% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATGGAGCCACAAATGCATaGGGGCTCTTTAATAACTCT +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHGATNA*GLFNNS
Trigger: AGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCC...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGGAGCCACAAATGCATaGGGGCTCTTTAATAACTCT +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQGATNA*GLFNNS
Trigger: AGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCCCAATACACAGCCCTaGAGCCAGATACATACTCAT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGPNTQP*SQIHTH
Trigger: ATGAGTATGTATCTGGCTGCAGGGCTGTGTATTGGG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGAGGAACTCATCTGCTaGCCCCGGAGCTATCTGTTC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCEELIC*PRSYLF
Trigger: GAACAGATAGCTCCGGGGGCAGCAGATGAGTTCCTC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAAGCAGCCTCAGCTGTaGTGTTCAAGTGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGKQPQL*CSSDQA
Trigger: AGCCTGGTCACTTGAACAGCACAGCTGAGGCTGCTT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGCACATGAGCAGACCTaGAATGTGCAGCATACAAAA +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQAHEQT*NVQHTK
Trigger: TTTTGTATGCTGCACATTGCAGGTCTGCTCATGTGC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCTAAGCATTCTAATTTaGTACAAGCTGGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGLSILI*YKLEEG
Trigger: ACCCTCCTCCAGCTTGTAGCAAATTAGAATGCTTAG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTGCTTTACTTCCCTCTaGATCTTCTGGCCGAGTAAG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGCFTSL*IFWPSK
Trigger: CTTACTCGGCCAGAAGATGCAGAGGGAAGTAAAGCA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTGCAGAGCCATTCATTaGTTTACTTCCCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQCRAIH*FTSLCI
Trigger: GATGCAGAGGGAAGTAAAGCAATGAATGGCTCTGCA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655819.1
CDS-3UTR GCA 90 bp GATTACCCACTTCTAGCCAAGACGGAGGCTGAATTTACCCTCCTTCAGAAAAATGCGTCTCATTACATCTaGCAGCCTCTCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: DYPLLAKTEAEFTLLQKNASHYI*QPLSPS
Trigger: AGAGGGAGAGAGAGGCTGGCAGATGTAATGAGACGC...ATTTTTCTGAAGGAGGGTAAATTCAGCCTCCGTCTTGGCTAGAAGTGGGTAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAGGCAAATGGAGAGGTaGCTTGCTTGGAAGACATTC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGRQMER*LAWKTF
Trigger: GAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCTTGAGGTTAAATCCTaGGTCATTGCATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQLEVKS*VIASSP
Trigger: TGGAGAGGATGCAATGACCCAGGATTTAACCTCAAG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACCCTTTGCGGCGCTCTaGGGTTCCAAAAGTAACACT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGPFAAL*GSKSNT
Trigger: AGTGTTACTTTTGGAACCCCAGAGCGCCGCAAAGGG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCGTAAACTGATCAGCTaGGTAATCATGGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGRKLIS*VIMVES
Trigger: GCTCTCCACCATGATTACCCAGCTGATCAGTTTACG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGATCTGTTCTTGCTGTTaGCGAGCAAGGTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGICSCC*RARSIC
Trigger: GCAAATGGACCTTGCTCGCCAACAGCAAGAACAGAT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGTCATGTGGAAAAATTaGGATCATGAGCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNVMWKN*DHERRH
Trigger: ATGCCTCCGCTCATGATCCCAATTTTTCCACATGAC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGAGTCCGCTGGTCATGTaGAAAAATTGGGATCATGAG +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQSPLVM*KNWDHE
Trigger: CTCATGATCCCAATTTTTCCACATGACCAGCGGACT...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGCTGCCAGAGTCCGCTaGTCATGTGGAAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGAARVR*SCGKIG
Trigger: CCCAATTTTTCCACATGACCAGCGGACTCTGGCAGC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGGGGTAGTTATCACCTaGTTTGTATGTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGGVVIT*FVCYSR
Trigger: CCTGGAATAACATACAAACCAGGTGATAACTACCCC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
48% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAGGCCCTTTAGCCTTTaGTTAATTTGTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGRPFSL*LICGWE
Trigger: CTCCCACCCACAAATTAACCAAAGGCTAAAGGGCCT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528429.5
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACAGGCTCTGCTGTCTTaGGTCGGGATGAGAGATTCA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGQALLS*VGMRDS
Trigger: TGAATCTCTCATCCCGACCCAAGACAGCAGAGCCTG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCAGGCTCTGCTGTCTTaGGTCGGGATGAGAGATTCA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGQALLS*VGMRDS
Trigger: TGAATCTCTCATCCCGACCCAAGACAGCAGAGCCTG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGGAAGAGGTTCTGGGTaGGAGACGTTGGGGACTTTA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGGRGSG*ETLGTL
Trigger: TAAAGTCCCCAACGTCTCCCACCCAGAACCTCTTCC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGATGCTGCTTTTGTTTaGCAGATTGACAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGDAAFV*QIDRAG
Trigger: ACCAGCCCTGTCAATCTGCCAAACAAAAGCAGCATC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTCCGCGCCTCCTGAATaGCTTTCATCACTGTATCCT +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPSAPPE*LSSLYP
Trigger: AGGATACAGTGATGAAAGCCATTCAGGAGGCGCGGA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTGCTGTTGCTCCCGCTaGATCTGCTCTCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWCCCSR*ICSRIF
Trigger: GAAGATGCGAGAGCAGATCCAGCGGGAGCAACAGCA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGCTGTTGCTCCCGCTaGATCTGCTCTCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCCCCSR*ICSRIF
Trigger: GAAGATGCGAGAGCAGATCCAGCGGGAGCAACAGCA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGCCCCATATTATTTATaGAGGACAGTTTCCCGTCAA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGAPYYL*RTVSRQ
Trigger: TTGACGGGAAACTGTCCTCCATAAATAATATGGGGC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGACTTTCCCGTTAACTaGGGCCCCAAATTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGDFPVN*GPKFSK
Trigger: CTTTGAGAATTTGGGGCCCCAGTTAACGGGAAAGTC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATCCCTCTGCATCTTCTaGCCGAGTAAGGTCGATGAC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGSLCIF*PSKVDD
Trigger: GTCATCGACCTTACTCGGCCAGAAGATGCAGAGGGA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTCCCTCTGCATCTTCTaGCCGAGTAAGGTCGATGAC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGSLCIF*PSKVDD
Trigger: GTCATCGACCTTACTCGGCCAGAAGATGCAGAGGGA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGGGTACTTCTCTAAGTaGATCTTGCTTAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGGYFSK*ILLSRA
Trigger: GGCCCGGCTAAGCAAGATCCACTTAGAGAAGTACCC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTACTTCTCTAAGTaGATCTTGCTTAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGGYFSK*ILLSRA
Trigger: GGCCCGGCTAAGCAAGATCCACTTAGAGAAGTACCC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGACAGGCAAACACAATTaGGTCCATGCACTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGTGKHN*VHALWQ
Trigger: TTGCCACAGTGCATGGACCCAATTGTGTTTGCCTGT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGTGTGGCGGTTGCTCTaGTGTGTGTATGTCATACCA +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPVWRLL*CVYVIP
Trigger: TGGTATGACATACACACACCAGAGCAACCGCCACAC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTGTCGATATCTGGTGTaGCGGTTGCTCTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGCRYLV*RLLWCV
Trigger: CACACACCAGAGCAACCGCCACACCAGATATCGACA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACACTCTGTCGATATCTaGTGTGGCGGTTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGHSVDI*CGGCSG
Trigger: ACCAGAGCAACCGCCACACCAGATATCGACAGAGTG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTGCTTCCAGGCGTTCTaGGGACATAAAATCACTATG +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQCFQAF*GHKITM
Trigger: CATAGTGATTTTATGTCCCCAGAACGCCTGGAAGCA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTGGCTTTTTGCATCCTaGGGATTTTGCAATGAACTC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGWLFAS*GFCNEL
Trigger: GAGTTCATTGCAAAATCCCCAGGATGCAAAAAGCCA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGAAATGTCTGGATCTGTaGACAGTGGGTTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQKCLDL*TVGSEL
Trigger: CAGTTCAGAACCCACTGTCCACAGATCCAGACATTT...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTGGGAGAGGATTGCCTaGCAGTGTCCCAATTCTAAG +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPWERIA*QCPNSK
Trigger: CTTAGAATTGGGACACTGCCAGGCAATCCTCTCCCA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGCAGTTGTTGGCACTTaGTACAGGACTTCTCATATG +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQAVVGT*YRTSHM
Trigger: CATATGAGAAGTCCTGTACCAAGTGCCAACAACTGC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAGTGGCACCTCCTGTTaGCCAACAATAATACTGCTG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGSGTSC*PTIILL
Trigger: CAGCAGTATTATTGTTGGCCAACAGGAGGTGCCACT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGAGAGGTGGCTTGCTTaGAAGACATTCTTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGERWLA*KTFFFH
Trigger: ATGAAAGAAGAATGTCTTCCAAGCAAGCCACCTCTC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528429.5
CDS-3UTR TCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTGGGAGGCCACATGTTaGTCACTGCCCTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWWEATC*SLPSSF
Trigger: AAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp ATGTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTTGTTCCTGATCTTAAGGGGTAGCTCCTCAGAGTaGGGTTTGTTGTGCATTATG +
Preference number: 4 (lower is better)
Translates to: MLNIVVTVGSLALFLILRGSSSE*GLLCIM
Trigger: CATAATGCACAACAAACCTCACTCTGAGGAGCTACC...CCTTAAGATCAGGAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCTTGTTGAATGGTACTaGCAAGTGTTGGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLVEWY*QVLVAP
Trigger: AGGAGCTACCAACACTTGTCAGTACCATTCAACAAG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACATTCTTTGCTGAGATaGCAGAACGCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGHSLLR*QNAVPV
Trigger: GACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGTCAGGCTTATGTGGTaGGGTAGAGGTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPVRLMW*GRGISE
Trigger: TTCCGAAATACCTCTACCTCACCACATAAGCCTGAC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGAAAAATTGGGATCATaGGCGGAGGCATGTGACCCT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGEKLGS*AEACDP
Trigger: AGGGTCACATGCCTCCGCTCATGATCCCAATTTTTC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATTTTATCCCAGTAGGTaGGACCGTCCCTGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGFYPSR*DRPCCV
Trigger: AACACAGCAGGGACGGTCTCACCTACTGGGATAAAA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGCTTCATCCTTAACTTaGGTTACAGGGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGASSLT*VTGLVP
Trigger: AGGGACCAGCCCTGTAACTCAAGTTAAGGATGAAGC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGCTTCATCCTTAACTTaGGTTACAGGGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGASSLT*VTGLVP
Trigger: AGGGACCAGCCCTGTAACTCAAGTTAAGGATGAAGC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTTTTGTTTGGCAGATTaGCAGGGCTGGTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPFCLAD*QGWFCW
Trigger: CCAGCAAAACCAGCCCTGTCAATCTGCCAAACAAAA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATTCATCACTGTATCCTaGTCCCCAAAAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGFITVS*SPKRAG
Trigger: CCCTGCCCTTTTTGGGGATCAGGATACAGTGATGAA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATCTTCCGCGCCTCCTaGATGGCTTTCATCACTGTA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGIFRAS*MAFITV
Trigger: TACAGTGATGAAAGCCATTCAGGAGGCGCGGAAGAT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAATCTTCCGCGCCTCCTaGATGGCTTTCATCACTGTA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGIFRAS*MAFITV
Trigger: TACAGTGATGAAAGCCATTCAGGAGGCGCGGAAGAT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGTGGTGATTGGAATCTaGGGCTGTTGCCCCACAGTA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCVVIGI*GCCPTV
Trigger: TACTGTGGGGCAACAGCCTCAGATTCCAATCACCAC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCACCTGTTCCTGTGGTaGTTGGAATCTGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGHLFLW*LESEAV
Trigger: AACAGCCTCAGATTCCAATCACCACAGGAACAGGTG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACACCTGTTCCTGTGGTaGTTGGAATCTGAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGHLFLW*LESEAV
Trigger: AACAGCCTCAGATTCCAATCACCACAGGAACAGGTG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACAGTCAGATGTCATCTaGGGCGATGGTGTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGQSDVI*GDGVVV
Trigger: AACTACCACACCATCGCCTCAGATGACATCTGACTG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTTCACTGCTATAGTCTaGTTTGGGGTCATCTTCATA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGFTAIV*FGVIFI
Trigger: TATGAAGATGACCCCAAATCAGACTATAGCAGTGAA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTTAAGACCATTCTGCTaGTGTAATTGTGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHLRPFC*CNCGAT
Trigger: TGTGGCTCCACAATTACATCAGCAGAATGGTCTTAA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACAGACCCTACCACTTGTaGACTGAATTAGGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNRPYHL*TELGEN
Trigger: ATTTTCCCCTAATTCAGTTCACAAGTGGTAGGGTCT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATAGACCCTACCACTTGTaGACTGAATTAGGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHRPYHL*TELGEN
Trigger: ATTTTCCCCTAATTCAGTTCACAAGTGGTAGGGTCT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAATGAACCCCAGTACTaGGGCAGAGCTGGAGCTAAA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGNEPQY*GRAGAK
Trigger: TTTAGCTCCAGCTCTGCCTCAGTACTGGGGTTCATT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGATGGCTAAAAGTAAATaGACCCCAGTACTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGMAKSK*TPVLRQ
Trigger: CTGCCTCAGTACTGGGGTTCATTTACTTTTAGCCAT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTAGTCCAGCATGTCAGTaGATTGTGCTGATTAAATTA +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARSPACQ*IVLIKL
Trigger: TAATTTAATCAGCACAATTCACTGACATGCTGGACT...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCAAAGCACAGTACCTTaGCAACAGAGTTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGQSTVP*QQSCSC
Trigger: ACAACTGCAACTCTGTTGTCAAGGTACTGTGCTTTG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACAGGAGGGGAAGACTTTaGAAAGTACCACTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNRRGRL*KVPLKD
Trigger: ATCTTTCAGTGGTACTTTTCAAAGTCTTCCCCTCCT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGTCTCTTCCTGGTGTTaGCTTTTCCATTTACCTAAA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGVSSWC*LFHLPK
Trigger: TTTAGGTAAATGGAAAAGTCAACACCAGGAAGAGAC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATCCTCTCCATCAGCTaGACAGGCAAATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGILSIS*TGKWRG
Trigger: ACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGAT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATCATGGTGGAGAGCTaGCGTTCTTTTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGIMVES*RSFSAR
Trigger: CCTGGCAGAAAAAGAACGGCAGCTCTCCACCATGAT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCTCGCAATCTGTTCTTaGTGTTGGCGAGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCLAICS*CWRARS
Trigger: GGACCTTGCTCGCCAACAGCAAGAACAGATTGCGAG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTGTTGCAGAAGTTGCTaGTGTTGTCTCGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGCCRSC*CCLAIC
Trigger: ACAGATTGCGAGACAACAGCAGCAACTTCTGCAACA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGAGGAGATTAATTTTGTaGTGCTGTTGCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGRRLIL*CCCRSC
Trigger: GCAACTTCTGCAACAGCAGCACAAAATTAATCTCCT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCAGAGGCTGTGCTGCTaGTTCATCCTTAACTTGAGT +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPQRLCC*FILNLS
Trigger: ACTCAAGTTAAGGATGAAGCAGCAGCACAGCCTCTG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGATTCAGAGGCTGTGCTaGTGCTTCATCCTTAACTTG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGIQRLC*CFILNL
Trigger: CAAGTTAAGGATGAAGCAGCAGCACAGCCTCTGAAT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTTTCCTTTTCATTCCTaGAGCTGTTCAGCCCCATAT +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQFPFHS*SCSAPY
Trigger: ATATGGGGCTGAACAGCTGCAGGAATGAAAAGGAAA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTCTCTAAGTGGATCTTaGTTAGCCGGGCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGSLSGS*LAGPAL
Trigger: AAGAGCAGGCCCGGCTAAGCAAGATCCACTTAGAGA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCATCAACAATGCAGGTaGGTTTCGGTCGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGHQQCR*VSVGVC
Trigger: ACAAACCCCGACCGAAACGCACCTGCATTGTTGATG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACATCAACAATGCAGGTaGGTTTCGGTCGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGHQQCR*VSVGVC
Trigger: ACAAACCCCGACCGAAACGCACCTGCATTGTTGATG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATTTTGCCATCAACAATaGAGGTGCGTTTCGGTCGGG +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGFCHQQ*RCVSVG
Trigger: CCCGACCGAAACGCACCTGCATTGTTGATGGCAAAA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCAATCCGAAGCTTTTTaGCATCAACAATGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGQSEAF*HQQCRC
Trigger: GCACCTGCATTGTTGATGGCAAAAAGCTTCGGATTG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCCCACAGTAAAGAACTaGCTCATCTCCTGTCTCCGA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGPTVKN*LISCLR
Trigger: TCGGAGACAGGAGATGAGGCAGTTCTTTACTGTGGG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCGATGGTGTGGTAGTTaGCATAGTGATAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGRWCGS*HSDSTR
Trigger: CCTGGTGCTATCACTATGGCAACTACCACACCATCG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTACACAATTGGGTCCATaGACTGTGGCAACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPTQLGP*TVATLF
Trigger: GAACAAGGTTGCCACAGTGCATGGACCCAATTGTGT...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAATCTGGTGTGGCGGTTaGTCTGGTGTGTGTATGTCA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGIWCGG*SGVCMS
Trigger: TGACATACACACACCAGAGCAACCGCCACACCAGAT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTCTTGGTTTCAGAAATaGTTCCAGGCGTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPSWFQK*FQAFWG
Trigger: TCCCCAGAACGCCTGGAAGCATTTCTGAAACCAAGA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGCATCCTGGGGATTTTaGAATGAACTCCCTAGATGT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGASWGF*NELPRC
Trigger: ACATCTAGGGAGTTCATTGCAAAATCCCCAGGATGC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACTGCAGGCCAAACACTaGTCTCTCACTGTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGLQAKH*SLTVAD
Trigger: ATCAGCTACAGTGAGAGAGCAGTGTTTGGCCTGCAG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTTTTGCTGTCCCAGCTaGAGGCCAAACACTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCFCCPS*RPNTAL
Trigger: GAGAGCAGTGTTTGGCCTGCAGCTGGGACAGCAAAA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCAGTGGGTTCTGAACTaGATGAGAACCCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPQWVLN*MRTLVK
Trigger: TTTCACCAGGGTTCTCATGCAGTTCAGAACCCACTG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGCACATGAGCAGACCTaGAATGTGCAGCATACAAAA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGAHEQT*NVQHTK
Trigger: TTTTGTATGCTGCACATTGCAGGTCTGCTCATGTGC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATCTAAGCATTCTAATTTaGTACAAGCTGGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHLSILI*YKLEEG
Trigger: ACCCTCCTCCAGCTTGTAGCAAATTAGAATGCTTAG...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGCCACACCCAGTGTTaGTATAGGAACCAAAGCACA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGGHTQC*YRNQST
Trigger: TGTGCTTTGGTTCCTATAGCAACACTGGGTGTGGCC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTGCAGAGCCATTCATTaGTTTACTTCCCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGCRAIH*FTSLCI
Trigger: GATGCAGAGGGAAGTAAAGCAATGAATGGCTCTGCA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACCTTGACAGACGAGTTACCCAGGGCTaGAGTGAGAGCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: ITSMPSKIEYLFLHNLDRRVTQG*SESRRE
Trigger: CTCCCTTCTGCTCTCACTGCAGCCCTGGGTAACTCG...TCTGTCAAGGTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGTTTGTTGTGCATTATaGGGTGCAGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGVCCAL*GAEADG
Trigger: CCCATCTGCCTCTGCACCCCATAATGCACAACAAAC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TCCTTCAGAAAAATGTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTTGTTCGTTTGTTGTGCATTATaGGGTGCAGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: SFRKMLNIVVTVGSLALFVCCAL*GAEADG
Trigger: CCCATCTGCCTCTGCACCCCATAATGCACAACAAAC...GAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAACATTTTTCTGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCCCTTTGCGGCGCTCTaGGGTTCCAAAAGTAACACT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWPFAAL*GSKSNT
Trigger: AGTGTTACTTTTGGAACCCCAGAGCGCCGCAAAGGG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCGTAAACTGATCAGCTaGGTAATCATGGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPRKLIS*VIMVES
Trigger: GCTCTCCACCATGATTACCCAGCTGATCAGTTTACG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGTCATGTGGAAAAATTaGGATCATGAGCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGVMWKN*DHERRH
Trigger: ATGCCTCCGCTCATGATCCCAATTTTTCCACATGAC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAGTCCGCTGGTCATGTaGAAAAATTGGGATCATGAG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGSPLVM*KNWDHE
Trigger: CTCATGATCCCAATTTTTCCACATGACCAGCGGACT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGCTGCCAGAGTCCGCTaGTCATGTGGAAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWAARVR*SCGKIG
Trigger: CCCAATTTTTCCACATGACCAGCGGACTCTGGCAGC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGCTGCCAGAGTCCGCTaGTCATGTGGAAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCAARVR*SCGKIG
Trigger: CCCAATTTTTCCACATGACCAGCGGACTCTGGCAGC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCCTTTGGTTAATTTGTaGGTGGGAGACATGACCCTT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGPLVNL*VGDMTL
Trigger: AAGGGTCATGTCTCCCACCCACAAATTAACCAAAGG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528429.5
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAGAGGTTCTGGGTaGGAGACGTTGGGGACTTTA +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWGRGSG*ETLGTL
Trigger: TAAAGTCCCCAACGTCTCCCACCCAGAACCTCTTCC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGGAAGAGGTTCTGGGTaGGAGACGTTGGGGACTTTA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCGRGSG*ETLGTL
Trigger: TAAAGTCCCCAACGTCTCCCACCCAGAACCTCTTCC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTCCCTCTGCATCTTCTaGCCGAGTAAGGTCGATGAC +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWSLCIF*PSKVDD
Trigger: GTCATCGACCTTACTCGGCCAGAAGATGCAGAGGGA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCATGAATGCATTCATTaGTCGCTTAATGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNHECIH*SLNVWL
Trigger: GAGCCACACATTAAGCGACCAATGAATGCATTCATG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGTCGATATCTGGTGTaGCGGTTGCTCTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCCRYLV*RLLWCV
Trigger: CACACACCAGAGCAACCGCCACACCAGATATCGACA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGGATGTAGTGAGAGGTaGTCTCAGGCAGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCGCSER*SQAEKT
Trigger: GGTCTTCTCTGCCTGAGACCACCTCTCACTACATCC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTGCTTCCAGGCGTTCTaGGGACATAAAATCACTATG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGCFQAF*GHKITM
Trigger: CATAGTGATTTTATGTCCCCAGAACGCCTGGAAGCA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTAACCTTGCTGCTGAATaGAATTCAGGGGGAAATGCC +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPNLAAE*NSGGNA
Trigger: GGCATTTCCCCCTGAATTCCATTCAGCAGCAAGGTT...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCCTAGATGTGCCAGCTaGGACAAGGCAACTCAGTGT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWPRCAS*DKATQC
Trigger: ACACTGAGTTGCCTTGTCCCAGCTGGCACATCTAGG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATAAAAAGGGAAATGTCTaGATCTGTGGACAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHKKGNV*ICGQWV
Trigger: AACCCACTGTCCACAGATCCAGACATTTCCCTTTTT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTCCGAAGAAGCAGCCTaGCTTCAGAAGGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGSEEAA*LQKEKK
Trigger: TTTCTTTTCCTTCTGAAGCCAGGCTGCTTCTTCGGA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGCAGTTGTTGGCACTTaGTACAGGACTTCTCATATG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGAVVGT*YRTSHM
Trigger: CATATGAGAAGTCCTGTACCAAGTGCCAACAACTGC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTTTCTTTGCAGTTGTTaGCACTTGGTACAGGACTTC +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHFLCSC*HLVQDF
Trigger: GAAGTCCTGTACCAAGTGCCAACAACTGCAAAGAAA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGACGCTCAATAGGATATaGCATCAGAAACAGAACATC +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGTLNRI*HQKQNI
Trigger: GATGTTCTGTTTCTGATGCCATATCCTATTGAGCGT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTTGTTCATGAGCTTTTaGAAAGCAATCTGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGLFMSF*KAICPQ
Trigger: TTGGGGACAGATTGCTTTCCAAAAGCTCATGAACAA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGAGAGGTGGCTTGCTTaGAAGACATTCTTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGERWLA*KTFFSA
Trigger: TGCGGAGAAGAATGTCTTCCAAGCAAGCCACCTCTC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528252.5
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGTAGCTCCTCAGAGTaGGGTTTGTTGTGCATTATG +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGGSSSE*GLLCIM
Trigger: CATAATGCACAACAAACCTCACTCTGAGGAGCTACC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGGTAGCTCCTCAGAGTaGGGTTTGTTGTGCATTATG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGGSSSE*GLLCIM
Trigger: CATAATGCACAACAAACCTCACTCTGAGGAGCTACC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGATTCCATTCTTTGCTaGGATGACAGAACGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGDSILC*DDRTLS
Trigger: GGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGATTCCATTCTTTGCTaGGATGACAGAACGCTGTCC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGDSILC*DDRTLS
Trigger: GGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGTCAGGCTTATGTGGTaGGGTAGAGGTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGVRLMW*GRGISE
Trigger: TTCCGAAATACCTCTACCTCACCACATAAGCCTGAC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGTCAGGCTTATGTGGTaGGGTAGAGGTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGVRLMW*GRGISE
Trigger: TTCCGAAATACCTCTACCTCACCACATAAGCCTGAC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TCCTTCAGAAAAATGTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTTGTTCGTCAGGCTTATGTGGTaGGGTAGAGGTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: SFRKMLNIVVTVGSLALFVRLMW*GRGISE
Trigger: TTCCGAAATACCTCTACCTCACCACATAAGCCTGAC...GAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAACATTTTTCTGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCCATTGTTGATGGAATaGACTGTACGGGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGPLLME*TVRGSY
Trigger: ATAACTACCCCGTACAGTTCATTCCATCAACAATGG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTAGCAGCTGCCATTGTTaGTGGAATGAACTGTACGGG +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCSSCHC*WNELYG
Trigger: CCCGTACAGTTCATTCCATCAACAATGGCAGCTGCT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGAGCAGCTGCCATTGTTaGTGGAATGAACTGTACGGG +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWSSCHC*WNELYG
Trigger: CCCGTACAGTTCATTCCATCAACAATGGCAGCTGCT...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGCTTCATCCTTAACTTaGGTTACAGGGCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCASSLT*VTGLVP
Trigger: AGGGACCAGCCCTGTAACTCAAGTTAAGGATGAAGC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTTTTGTTTGGCAGATTaGCAGGGCTGGTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGFCLAD*QGWFCW
Trigger: CCAGCAAAACCAGCCCTGTCAATCTGCCAAACAAAA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTTCATCACTGTATCCTaGTCCCCAAAAAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCFITVS*SPKRAG
Trigger: CCCTGCCCTTTTTGGGGATCAGGATACAGTGATGAA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTTAAGACCATTCTGCTaGTGTAATTGTGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLRPFC*CNCGAT
Trigger: TGTGGCTCCACAATTACATCAGCAGAATGGTCTTAA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTAATTCCGAGGCCTTTTaGATATGCTCTACATGCAGC +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPNSEAF*ICSTCS
Trigger: GCTGCATGTAGAGCATATTCAAAAGGCCTCGGAATT...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTTGTCTCCAGATTCCTaGGTACCTTACCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLSPDS*VPYHFL
Trigger: CAGAAAATGGTAAGGTACTCAGGAATCTGGAGACAA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAACTATCCCATTCACTaGCATTCTCCCACTAAACCT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGNYPIH*HSPTKP
Trigger: AGGTTTAGTGGGAGAATGTCAGTGAATGGGATAGTT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATTCCTATGTCCTGGTaGTCAGATTCTGGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGIPMSW*SDSGLS
Trigger: GGACAACCCAGAATCTGATCACCAGGACATAGGAAT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTTCTTGAATCTAAACTaGCATGACGGGACGTTTATT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGFLNLN*HDGTFI
Trigger: AATAAACGTCCCGTCATGTCAGTTTAGATTCAAGAA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAAATCAAATCAGGCCTaGGGACAAGGCTGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGKSNQA*GQGWRV
Trigger: TACTCTCCAGCCTTGTCCTCAGGCCTGATTTGATTT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGATGACTTAAGGAAATaGTGCAAGTGCTTTTGTGAA +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGDDLRK*CKCFCE
Trigger: TTCACAAAAGCACTTGCATCATTTCCTTAAGTCATC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATAGCAAGATATGTCACTaGGTTTTCTTCAAGCGTTCA +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHSKICH*VFFKRS
Trigger: TGAACGCTTGAAGAAAACTCAGTGACATATCTTGCT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCAAAGCACAGTACCTTaGCAACAGAGTTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPQSTVP*QQSCSC
Trigger: ACAACTGCAACTCTGTTGTCAAGGTACTGTGCTTTG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGTCTCTTCCTGGTGTTaGCTTTTCCATTTACCTAAA +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQVSSWC*LFHLPK
Trigger: TTTAGGTAAATGGAAAAGTCAACACCAGGAAGAGAC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACCACATGTTGATCACTaGCCTCTTCCTTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGPHVDH*PLPFPL
Trigger: CAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCCACATGTTGATCACTaGCCTCTTCCTTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGPHVDH*PLPFPL
Trigger: CAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GATTACCCACTTCTAGCCAAGACGGAGGCTGAATTTACCCTCCTTCAGAAAAATCCACATGTTGATCACTaGCCTCTTCCTTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: DYPLLAKTEAEFTLLQKNPHVDH*PLPFPL
Trigger: CAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGG...ATTTTTCTGAAGGAGGGTAAATTCAGCCTCCGTCTTGGCTAGAAGTGGGTAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR GCA 90 bp AGACTTATAATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACCGGCAAGACTCCCTTTaGGGCGCTCTGGGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: RLIITSMPSKIEYLFLHNRQDSL*GALGFQ
Trigger: TTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCG...GTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTATTATAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR GCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGAAAGTAGTTTTTCCATaGAGGAGGAATCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGKVVFP*RRNPLV
Trigger: AACAAGAGGATTCCTCCTGCATGGAAAAACTACTTT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTATCATGGTGGAGAGCTaGCGTTCTTTTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCIMVES*RSFSAR
Trigger: CCTGGCAGAAAAAGAACGGCAGCTCTCCACCATGAT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATGCTGTTGCAGAAGTTaGTGCTGTTGTCTCGCAATC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGCCCRS*CCCLAI
Trigger: GATTGCGAGACAACAGCAGCAACTTCTGCAACAGCA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACAGAGGCTGTGCTGCTaGTTCATCCTTAACTTGAGT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGQRLCC*FILNLS
Trigger: ACTCAAGTTAAGGATGAAGCAGCAGCACAGCCTCTG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGAGATTCAGAGGCTGTaGTGCTGCTTCATCCTTAAC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGEIQRL*CCFILN
Trigger: GTTAAGGATGAAGCAGCAGCACAGCCTCTGAATCTC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTCTCTAAGTGGATCTTaGTTAGCCGGGCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWSLSGS*LAGPAL
Trigger: AAGAGCAGGCCCGGCTAAGCAAGATCCACTTAGAGA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCATCAACAATGCAGGTaGGTTTCGGTCGGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCHQQCR*VSVGVC
Trigger: ACAAACCCCGACCGAAACGCACCTGCATTGTTGATG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACGAGACCTCATCAGTTaGTTATACTCCCCAATCCGA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGRDLIS*LYSPIR
Trigger: TCGGATTGGGGAGTATAAGCAACTGATGAGGTCTCG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCGAGACCTCATCAGTTaGTTATACTCCCCAATCCGA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGRDLIS*LYSPIR
Trigger: TCGGATTGGGGAGTATAAGCAACTGATGAGGTCTCG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCCCACAGTAAAGAACTaGCTCATCTCCTGTCTCCGA +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWPTVKN*LISCLR
Trigger: TCGGAGACAGGAGATGAGGCAGTTCTTTACTGTGGG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAACACAATTGGGTCCATaGACTGTGGCAACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGTQLGP*TVATLF
Trigger: GAACAAGGTTGCCACAGTGCATGGACCCAATTGTGT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTATCTGGTGTGGCGGTTaGTCTGGTGTGTGTATGTCA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCIWCGG*SGVCMS
Trigger: TGACATACACACACCAGAGCAACCGCCACACCAGAT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATCTTGGTTTCAGAAATaGTTCCAGGCGTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGSWFQK*FQAFWG
Trigger: TCCCCAGAACGCCTGGAAGCATTTCTGAAACCAAGA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACAGTGGGTTCTGAACTaGATGAGAACCCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGQWVLN*MRTLVK
Trigger: TTTCACCAGGGTTCTCATGCAGTTCAGAACCCACTG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCAGTGGGTTCTGAACTaGATGAGAACCCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGQWVLN*MRTLVK
Trigger: TTTCACCAGGGTTCTCATGCAGTTCAGAACCCACTG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTCAGAGGTGGATTTTTaGCTTTGTAGTGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHSEVDF*LCSGIH
Trigger: ATGAATGCCACTACAAAGGCAAAAATCCACCTCTGA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTCAGAGGTGGATTTTTaGCTTTGTAGTGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNSEVDF*LCSGIH
Trigger: ATGAATGCCACTACAAAGGCAAAAATCCACCTCTGA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTTTTTGGGAGAGGATTaGCTGGCAGTGTCCCAATTC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGFLGED*LAVSQF
Trigger: GAATTGGGACACTGCCAGGCAATCCTCTCCCAAAAA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTGCTTTACTTCCCTCTaGATCTTCTGGCCGAGTAAG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGCFTSL*IFWPSK
Trigger: CTTACTCGGCCAGAAGATGCAGAGGGAAGTAAAGCA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATGCTTTACTTCCCTCTaGATCTTCTGGCCGAGTAAG +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGCFTSL*IFWPSK
Trigger: CTTACTCGGCCAGAAGATGCAGAGGGAAGTAAAGCA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTTGTTCCTGATCTTAAGGGACTTGAAAGAAAGACTTaGCTCTTGTTCAGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: VEYSGDSGQLGLVPDLKGLERKT*LLFSPS
Trigger: ACTCGGACTGAACAAGAGGCAAGTCTTTCTTTCAAG...TCCCTTAAGATCAGGAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CCA 90 bp GATTACCCACTTCTAGCCAAGACGGAGGCTGAATTTACCCTCCTTCAGAAAAATAGGCAAATGGAGAGGTaGCTTGCTTGGAAGACATTC +
Preference number: 4 (lower is better)
Translates to: DYPLLAKTEAEFTLLQKNRQMER*LAWKTF
Trigger: GAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCT...ATTTTTCTGAAGGAGGGTAAATTCAGCCTCCGTCTTGGCTAGAAGTGGGTAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGTTTGTTGTGCATTATaGGGTGCAGAGGCAGATGGG +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWVCCAL*GAEADG
Trigger: CCCATCTGCCTCTGCACCCCATAATGCACAACAAAC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACGTAAACTGATCAGCTaGGTAATCATGGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGRKLIS*VIMVES
Trigger: GCTCTCCACCATGATTACCCAGCTGATCAGTTTACG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATCTGTTCTTGCTGTTaGCGAGCAAGGTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGICSCC*RARSIC
Trigger: GCAAATGGACCTTGCTCGCCAACAGCAAGAACAGAT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGGTAGTTATCACCTaGTTTGTATGTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGGVVIT*FVCYSR
Trigger: CCTGGAATAACATACAAACCAGGTGATAACTACCCC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGATGCTGCTTTTGTTTaGCAGATTGACAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGDAAFV*QIDRAG
Trigger: ACCAGCCCTGTCAATCTGCCAAACAAAAGCAGCATC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGATGCTGCTTTTGTTTaGCAGATTGACAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGDAAFV*QIDRAG
Trigger: ACCAGCCCTGTCAATCTGCCAAACAAAAGCAGCATC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTCCGCGCCTCCTGAATaGCTTTCATCACTGTATCCT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWSAPPE*LSSLYP
Trigger: AGGATACAGTGATGAAAGCCATTCAGGAGGCGCGGA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGCCCCATATTATTTATaGAGGACAGTTTCCCGTCAA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGAPYYL*RTVSRQ
Trigger: TTGACGGGAAACTGTCCTCCATAAATAATATGGGGC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGACTTTCCCGTTAACTaGGGCCCCAAATTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGDFPVN*GPKFSK
Trigger: CTTTGAGAATTTGGGGCCCCAGTTAACGGGAAAGTC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTAAGGTCGATGACACCTaGGCCCAGTTTTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCKVDDT*AQFSIF
Trigger: GAAGATGGAAAACTGGGCCCAGGTGTCATCGACCTT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGAAGGTCGATGACACCTaGGCCCAGTTTTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWKVDDT*AQFSIF
Trigger: GAAGATGGAAAACTGGGCCCAGGTGTCATCGACCTT...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCATGAATGCATTCATTaGTCGCTTAATGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGHECIH*SLNVWL
Trigger: GAGCCACACATTAAGCGACCAATGAATGCATTCATG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTGTCATCTGAGGCGATaGTGTGGTAGTTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGCHLRR*CGSCHS
Trigger: ACTATGGCAACTACCACACCATCGCCTCAGATGACA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATGTCATCTGAGGCGATaGTGTGGTAGTTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGCHLRR*CGSCHS
Trigger: ACTATGGCAACTACCACACCATCGCCTCAGATGACA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCAGCTGCACACGCCGTaGACTTGTTCTGTTTCACAA +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWQLHTP*TCSVSQ
Trigger: TTGTGAAACAGAACAAGTCCACGGCGTGTGCAGCTG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAACAGGCAAACACAATTaGGTCCATGCACTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGTGKHN*VHALWQ
Trigger: TTGCCACAGTGCATGGACCCAATTGTGTTTGCCTGT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGTGTGGCGGTTGCTCTaGTGTGTGTATGTCATACCA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCVWRLL*CVYVIP
Trigger: TGGTATGACATACACACACCAGAGCAACCGCCACAC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAACCTTGCTGCTGAATaGAATTCAGGGGGAAATGCC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGNLAAE*NSGGNA
Trigger: GGCATTTCCCCCTGAATTCCATTCAGCAGCAAGGTT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTCTGAGGCTGTCATGTaGCTTTTTGCATCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCSEAVM*LFASWG
Trigger: TCCCCAGGATGCAAAAAGCCACATGACAGCCTCAGA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCCTGTAGTTAGGAGATaGGGAATAAAACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPPVVRR*GIKPHC
Trigger: GCAGTGAGGTTTTATTCCCCATCTCCTAACTACAGG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAAAAAGGGAAATGTCTaGATCTGTGGACAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGKKGNV*ICGQWV
Trigger: AACCCACTGTCCACAGATCCAGACATTTCCCTTTTT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTCTAAAAGGCTGAGCTaGGTACACATGAAAACAACA +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHSKRLS*VHMKTT
Trigger: TGTTGTTTTCATGTGTACCCAGCTCAGCCTTTTAGA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCCTGAATTTAGAACTTaGCCTGGGCTTTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGPEFRT*PGLWCQ
Trigger: CTGACACCAAAGCCCAGGCCAAGTTCTAAATTCAGG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATGCGTTCATATTGCCATaGACACTGATTAGAAGAGTT +
Preference number: 4 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHAFILP*TLIRRV
Trigger: AACTCTTCTAATCAGTGTCCATGGCAATATGAACGC...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCTCACTTTATGCTTGTaGTTCTTCAGGAATAAGAAA +
Preference number: 4 (lower is better)
Translates to: WRLLWCVYVIPHHALMARLTLCL*FFRNKK
Trigger: TTTCTTATTCCTGAAGAACCACAAGCATAAAGTGAG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGTGGCACCTCCTGTTaGCCAACAATAATACTGCTG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGSGTSC*PTIILL
Trigger: CAGCAGTATTATTGTTGGCCAACAGGAGGTGCCACT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
3UTR CAA 72 bp AACTCTACAAATGGAAAATTGGAATTCCGAGGCCTTTaGAATATGCTCTACATGCAGCTGCACACGCCGTGG +
Preference number: 4 (lower is better)
Translates to: NSTNGKLEFRGL*NMLYMQLHTPW
Trigger: CCACGGCGTGTGCAGCTGCATGTAGAGCATATTCAAAAGGCCTCGGAATTCCAATTTTCCATTTGTAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTAGCTCCTCAGAGTaGGGTTTGTTGTGCATTATG +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWGSSSE*GLLCIM
Trigger: CATAATGCACAACAAACCTCACTCTGAGGAGCTACC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCTTGTTGAATGGTACTaGCAAGTGTTGGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGLVEWY*QVLVAP
Trigger: AGGAGCTACCAACACTTGTCAGTACCATTCAACAAG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TCCTTCAGAAAAATGTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTTGTTCCTTGTTGAATGGTACTaGCAAGTGTTGGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SFRKMLNIVVTVGSLALFLVEWY*QVLVAP
Trigger: AGGAGCTACCAACACTTGTCAGTACCATTCAACAAG...GAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAACATTTTTCTGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR TCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGATTCCATTCTTTGCTaGGATGACAGAACGCTGTCC +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWDSILC*DDRTLS
Trigger: GGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGTCAGGCTTATGTGGTaGGGTAGAGGTATTTCGGAA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCVRLMW*GRGISE
Trigger: TTCCGAAATACCTCTACCTCACCACATAAGCCTGAC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTTTTGTTTGGCAGATTaGCAGGGCTGGTTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCFCLAD*QGWFCW
Trigger: CCAGCAAAACCAGCCCTGTCAATCTGCCAAACAAAA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTTCACTGCTATAGTCTaGTTTGGGGTCATCTTCATA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGFTAIV*FGVIFI
Trigger: TATGAAGATGACCCCAAATCAGACTATAGCAGTGAA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACACAGCATACCTGAGTaGGAATGTTTAACCCCATCT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGHSIPE*ECLTPS
Trigger: AGATGGGGTTAAACATTCTCACTCAGGTATGCTGTG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTTGTCTCCAGATTCCTaGGTACCTTACCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPLSPDS*VPYHFL
Trigger: CAGAAAATGGTAAGGTACTCAGGAATCTGGAGACAA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGTTGAACCTTGCTGCTaGATGGAATTCAGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCVEPCC*MEFRGK
Trigger: TTTCCCCCTGAATTCCATTCAGCAGCAAGGTTCAAC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGAAAACAAGAGTGAACTaGGGAGGAGAGGTATATAAT +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQKTRVN*GGEVYN
Trigger: ATTATATACCTCTCCTCCTCAGTTCACTCTTGTTTT...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACTCCCAAAGCAAACTaGCTGTCTCCTAACTGTAGT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGTPKAN*LSPNCS
Trigger: ACTACAGTTAGGAGACAGTCAGTTTGCTTTGGGAGT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGATTTGAAGATACTATaGAATAGGGAGCACCGCAAA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGDLKIL*NREHRK
Trigger: TTTGCGGTGCTCCCTATTTCATAGTATCTTCAAATC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAATTTCAGCCCTAGAGTaGTCACGCCCTTTTCAAACA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGISALE*SRPFQT
Trigger: TGTTTGAAAAGGGCGTGATCACTCTAGGGCTGAAAT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACAGTCCAGCATGTCAGTaGATTGTGCTGATTAAATTA +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNSPACQ*IVLIKL
Trigger: TAATTTAATCAGCACAATTCACTGACATGCTGGACT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTACAAACTTTACACTTTaGAACAGCAGCCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPTNFTL*NSSQHV
Trigger: GACATGCTGGCTGCTGTTTCAAAGTGTAAAGTTTGT...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAGTGTGAGAAAGATGTaGTGGCAACCCTTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGSVRKM*WQPLRS
Trigger: TGACCTTAAGGGTTGCCATCACATCTTTCTCACACT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAATCAAGAGGAGAGTGTaGGAAAGATGTGATGGCAAC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGIKRRV*ERCDGN
Trigger: GTTGCCATCACATCTTTCTCACACTCTCCTCTTGAT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCCACATGTTGATCACTaGCCTCTTCCTTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCPHVDH*PLPFPL
Trigger: CAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATGTTGCAGAAGTTGCTaGTGTTGTCTCGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGCCRSC*CCLAIC
Trigger: ACAGATTGCGAGACAACAGCAGCAACTTCTGCAACA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTGTTGCAGAAGTTGCTaGTGTTGTCTCGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGCCRSC*CCLAIC
Trigger: ACAGATTGCGAGACAACAGCAGCAACTTCTGCAACA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTGCTGTTGCAGAAGTTaGTGCTGTTGTCTCGCAATC +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWCCCRS*CCCLAI
Trigger: GATTGCGAGACAACAGCAGCAACTTCTGCAACAGCA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAGGAGATTAATTTTGTaGTGCTGTTGCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGRRLIL*CCCRSC
Trigger: GCAACTTCTGCAACAGCAGCACAAAATTAATCTCCT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGAGGTGTCCAAATTCCTaGCAAAACGGTCACTTAGGC +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWRCPNS*QNGHLG
Trigger: GCCTAAGTGACCGTTTTGGCAGGAATTTGGACACCT...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316399.10
ENST00000396356.7
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCAGAGGCTGTGCTGCTaGTTCATCCTTAACTTGAGT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCQRLCC*FILNLS
Trigger: ACTCAAGTTAAGGATGAAGCAGCAGCACAGCCTCTG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATTCAGAGGCTGTGCTaGTGCTTCATCCTTAACTTG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGIQRLC*CFILNL
Trigger: CAAGTTAAGGATGAAGCAGCAGCACAGCCTCTGAAT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAATTCAGAGGCTGTGCTaGTGCTTCATCCTTAACTTG +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGIQRLC*CFILNL
Trigger: CAAGTTAAGGATGAAGCAGCAGCACAGCCTCTGAAT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGAGATTCAGAGGCTGTaGTGCTGCTTCATCCTTAAC +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWEIQRL*CCFILN
Trigger: GTTAAGGATGAAGCAGCAGCACAGCCTCTGAATCTC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGGGCTTCATTTTCACTaGTATAGTCTGATTTGGGGT +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPGLHFH*YSLIWG
Trigger: ACCCCAAATCAGACTATAGCAGTGAAAATGAAGCCC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGAGCCACAAATGCATaGGGGCTCTTTAATAACTCT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGGATNA*GLFNNS
Trigger: AGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTACACAATTGGGTCCATaGACTGTGGCAACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCTQLGP*TVATLF
Trigger: GAACAAGGTTGCCACAGTGCATGGACCCAATTGTGT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGCATCCTGGGGATTTTaGAATGAACTCCCTAGATGT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGASWGF*NELPRC
Trigger: ACATCTAGGGAGTTCATTGCAAAATCCCCAGGATGC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTTTTTGGGAGAGGATTaGCTGGCAGTGTCCCAATTC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCFLGED*LAVSQF
Trigger: GAATTGGGACACTGCCAGGCAATCCTCTCCCAAAAA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACATACATTCCTCTAGCTaGATTTCTTTGCAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNIHSSS*ISLQLL
Trigger: CAACAACTGCAAAGAAATGCAGCTAGAGGAATGTAT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGGCCAAGTAGGTACCTaGATTATACATAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQGQVGT*IIHRIS
Trigger: AGAAATTCTATGTATAATGCAGGTACCTACTTGGCC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGGCCAAGTAGGTACCTaGATTATACATAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNGQVGT*IIHRIS
Trigger: AGAAATTCTATGTATAATGCAGGTACCTACTTGGCC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGATCTCACGTCAATACTaGACAACAAAATCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQISRQY*TTKSKK
Trigger: CTTCTTGGATTTTGTTGTGCAGTATTGACGTGAGAT...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTTGTTCCTGATCTTAAGGGAAATGGAGAGGTGGCTTaGTTGGAAGACATTCTTAAA +
Preference number: 4 (lower is better)
Translates to: VEYSGDSGQLGLVPDLKGNGEVA*LEDILK
Trigger: TTTAAGAATGTCTTCCAAGCAAGCCACCTCTCCATT...TCCCTTAAGATCAGGAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR GCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTGCTTTACTTCCCTCTaGATCTTCTGGCCGAGTAAG +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWCFTSL*IFWPSK
Trigger: CTTACTCGGCCAGAAGATGCAGAGGGAAGTAAAGCA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTGCAGAGCCATTCATTaGTTTACTTCCCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGCRAIH*FTSLCI
Trigger: GATGCAGAGGGAAGTAAAGCAATGAATGGCTCTGCA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATGCAGAGCCATTCATTaGTTTACTTCCCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGCRAIH*FTSLCI
Trigger: GATGCAGAGGGAAGTAAAGCAATGAATGGCTCTGCA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp AAGGTGTATCTTCAGGGTAAATTCCAAGAAGAGGACTACTGGATCAAAAGAAAGCTGTTTGTGTTAGCCTaGGAGTTACCCAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: KVYLQGKFQEEDYWIKRKLFVLA*ELPRAA
Trigger: TGCAGCCCTGGGTAACTCGCAGGCTAACACAAACAG...CTTTCTTTTGATCCAGTAGTCCTCTTCTTGGAATTTACCCTGAAGATACACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTAGGCAAATGGAGAGGTaGCTTGCTTGGAAGACATTC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCRQMER*LAWKTF
Trigger: GAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGAGGCAAATGGAGAGGTaGCTTGCTTGGAAGACATTC +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWRQMER*LAWKTF
Trigger: GAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCT...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACTTGAGGTTAAATCCTaGGTCATTGCATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGLEVKS*VIASSP
Trigger: TGGAGAGGATGCAATGACCCAGGATTTAACCTCAAG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCTCCAAGAAGTTCACTaGTATTTAGTCTTTCCATTT +
Preference number: 4 (lower is better)
Translates to: CGATNACGLFNNSLLGRGLQEVH*YLVFPF
Trigger: AAATGGAAAGACTAAATACCAGTGAACTTCTTGGAG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCGTAAACTGATCAGCTaGGTAATCATGGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCRKLIS*VIMVES
Trigger: GCTCTCCACCATGATTACCCAGCTGATCAGTTTACG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCGTAAACTGATCAGCTaGGTAATCATGGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWRKLIS*VIMVES
Trigger: GCTCTCCACCATGATTACCCAGCTGATCAGTTTACG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGTCATGTGGAAAAATTaGGATCATGAGCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGVMWKN*DHERRH
Trigger: ATGCCTCCGCTCATGATCCCAATTTTTCCACATGAC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGTCATGTGGAAAAATTaGGATCATGAGCGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGVMWKN*DHERRH
Trigger: ATGCCTCCGCTCATGATCCCAATTTTTCCACATGAC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAGTCCGCTGGTCATGTaGAAAAATTGGGATCATGAG +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGSPLVM*KNWDHE
Trigger: CTCATGATCCCAATTTTTCCACATGACCAGCGGACT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGTCCGCTGGTCATGTaGAAAAATTGGGATCATGAG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGSPLVM*KNWDHE
Trigger: CTCATGATCCCAATTTTTCCACATGACCAGCGGACT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGGGGTAGTTATCACCTaGTTTGTATGTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPGVVIT*FVCYSR
Trigger: CCTGGAATAACATACAAACCAGGTGATAACTACCCC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCCTTTGGTTAATTTGTaGGTGGGAGACATGACCCTT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGPLVNL*VGDMTL
Trigger: AAGGGTCATGTCTCCCACCCACAAATTAACCAAAGG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528429.5
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACCTTTGGTTAATTTGTaGGTGGGAGACATGACCCTT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGPLVNL*VGDMTL
Trigger: AAGGGTCATGTCTCCCACCCACAAATTAACCAAAGG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528429.5
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGATGCTGCTTTTGTTTaGCAGATTGACAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCDAAFV*QIDRAG
Trigger: ACCAGCCCTGTCAATCTGCCAAACAAAAGCAGCATC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGCCCCATATTATTTATaGAGGACAGTTTCCCGTCAA +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPAPYYL*RTVSRQ
Trigger: TTGACGGGAAACTGTCCTCCATAAATAATATGGGGC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTGTCATCTGAGGCGATaGTGTGGTAGTTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWCHLRR*CGSCHS
Trigger: ACTATGGCAACTACCACACCATCGCCTCAGATGACA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTGGGTCCATGCACTGTaGCAACCTTGTTCATTCCTT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWWVHAL*QPCSFL
Trigger: AAGGAATGAACAAGGTTGCCACAGTGCATGGACCCA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACCTGTAGTTAGGAGATaGGGAATAAAACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGPVVRR*GIKPHC
Trigger: GCAGTGAGGTTTTATTCCCCATCTCCTAACTACAGG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGCTTCCGTACCTTACTaGAAAAGACACTGCTTCATA +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPASVPY*KRHCFI
Trigger: TATGAAGCAGTGTCTTTTCCAGTAAGGTACGGAAGC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATCCGAAGAAGCAGCCTaGCTTCAGAAGGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGSEEAA*LQKEKK
Trigger: TTTCTTTTCCTTCTGAAGCCAGGCTGCTTCTTCGGA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTAGTGGCACCTCCTGTTaGCCAACAATAATACTGCTG +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCSGTSC*PTIILL
Trigger: CAGCAGTATTATTGTTGGCCAACAGGAGGTGCCACT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGAGAGGTGGCTTGCTTaGAAGACATTCTTCCCATTT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGERWLA*KTFFPF
Trigger: AAATGGGAAGAATGTCTTCCAAGCAAGCCACCTCTC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527619.6
ENST00000655819.1
CDS-3UTR CCA 90 bp AGACTTATAATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACAGCAGAAGGGAGGAGTaGGAGTGCCAGTCTGCGTAC +
Preference number: 4 (lower is better)
Translates to: RLIITSMPSKIEYLFLHNSRREE*ECQSAY
Trigger: GTACGCAGACTGGCACTCCCACTCCTCCCTTCTGCT...GTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTATTATAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
3UTR CAA 72 bp AGGCAAACACAATTGGGTCCATGCACTGTGGCAACCTaGTTCATTCCTTACAATATCTTGTCTCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: RQTQLGPCTVAT*FIPYNILSPDS
Trigger: GGAATCTGGAGACAAGATATTGTAAGGAATGAACAAGGTTGCCACAGTGCATGGACCCAATTGTGTTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCTTGTTGAATGGTACTaGCAAGTGTTGGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCLVEWY*QVLVAP
Trigger: AGGAGCTACCAACACTTGTCAGTACCATTCAACAAG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCAGTCAGCATCTTGTTaGATGGTACTGACAAGTGTT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGQSASC*MVLTSV
Trigger: AACACTTGTCAGTACCATTCAACAAGATGCTGACTG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCCATTGTTGATGGAATaGACTGTACGGGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGPLLME*TVRGSY
Trigger: ATAACTACCCCGTACAGTTCATTCCATCAACAATGG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAGACATCTACGGGTTaGGATAAGTTTCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGKTSTG*DKFQVL
Trigger: CAGGACTTGAAACTTATCTCAACCCGTAGATGTCTT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCACAGCATACCTGAGTaGGAATGTTTAACCCCATCT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCHSIPE*ECLTPS
Trigger: AGATGGGGTTAAACATTCTCACTCAGGTATGCTGTG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGAATTCCGAGGCCTTTTaGATATGCTCTACATGCAGC +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWNSEAF*ICSTCS
Trigger: GCTGCATGTAGAGCATATTCAAAAGGCCTCGGAATT...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAACTATCCCATTCACTaGCATTCTCCCACTAAACCT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGNYPIH*HSPTKP
Trigger: AGGTTTAGTGGGAGAATGTCAGTGAATGGGATAGTT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAATGTCAGGGAGCAGATaGCTTAAGGAAATGATGCAA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGMSGSR*LKEMMQ
Trigger: TTGCATCATTTCCTTAAGTCATCTGCTCCCTGACAT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTAGCAAGATATGTCACTaGGTTTTCTTCAAGCGTTCA +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPSKICH*VFFKRS
Trigger: TGAACGCTTGAAGAAAACTCAGTGACATATCTTGCT...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAGTCCAGCATGTCAGTaGATTGTGCTGATTAAATTA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGSPACQ*IVLIKL
Trigger: TAATTTAATCAGCACAATTCACTGACATGCTGGACT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCAAAGCACAGTACCTTaGCAACAGAGTTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCQSTVP*QQSCSC
Trigger: ACAACTGCAACTCTGTTGTCAAGGTACTGTGCTTTG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTAGTGTGAGAAAGATGTaGTGGCAACCCTTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCSVRKM*WQPLRS
Trigger: TGACCTTAAGGGTTGCCATCACATCTTTCTCACACT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAGGAGGGGAAGACTTTaGAAAGTACCACTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGRRGRL*KVPLKD
Trigger: ATCTTTCAGTGGTACTTTTCAAAGTCTTCCCCTCCT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCACTCCTGTTTCACCTaGCTAAACTGTAGGTATTTG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGHSCFT*LNCRYL
Trigger: CAAATACCTACAGTTTAGTCAGGTGAAACAGGAGTG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527619.6
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGTTGCAGAAGTTGCTaGTGTTGTCTCGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCCCRSC*CCLAIC
Trigger: ACAGATTGCGAGACAACAGCAGCAACTTCTGCAACA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTGTTGCAGAAGTTGCTaGTGTTGTCTCGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWCCRSC*CCLAIC
Trigger: ACAGATTGCGAGACAACAGCAGCAACTTCTGCAACA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTTTCCTTTTCATTCCTaGAGCTGTTCAGCCCCATAT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGFPFHS*SCSAPY
Trigger: ATATGGGGCTGAACAGCTGCAGGAATGAAAAGGAAA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCAATCCGAAGCTTTTTaGCATCAACAATGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCQSEAF*HQQCRC
Trigger: GCACCTGCATTGTTGATGGCAAAAAGCTTCGGATTG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCTTCATTTTCACTaGTATAGTCTGATTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGGLHFH*YSLIWG
Trigger: ACCCCAAATCAGACTATAGCAGTGAAAATGAAGCCC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGGAGCCACAAATGCATaGGGGCTCTTTAATAACTCT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCGATNA*GLFNNS
Trigger: AGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTACTGGAAAAGACACTaGTTCATATCTGCCAATGAA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGYWKRH*FISANE
Trigger: TTCATTGGCAGATATGAAGCAGTGTCTTTTCCAGTA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGATACATTCCTCTAGCTaGATTTCTTTGCAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGIHSSS*ISLQLL
Trigger: CAACAACTGCAAAGAAATGCAGCTAGAGGAATGTAT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGCACATGAGCAGACCTaGAATGTGCAGCATACAAAA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCAHEQT*NVQHTK
Trigger: TTTTGTATGCTGCACATTGCAGGTCTGCTCATGTGC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCTTGAGGTTAAATCCTaGGTCATTGCATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCLEVKS*VIASSP
Trigger: TGGAGAGGATGCAATGACCCAGGATTTAACCTCAAG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGGGGTAGTTATCACCTaGTTTGTATGTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGGVVIT*FVCYSR
Trigger: CCTGGAATAACATACAAACCAGGTGATAACTACCCC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGTAGTTATCACCTaGTTTGTATGTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGGVVIT*FVCYSR
Trigger: CCTGGAATAACATACAAACCAGGTGATAACTACCCC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGCCCCATATTATTTATaGAGGACAGTTTCCCGTCAA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGAPYYL*RTVSRQ
Trigger: TTGACGGGAAACTGTCCTCCATAAATAATATGGGGC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACATGAATGCATTCATTaGTCGCTTAATGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGHECIH*SLNVWL
Trigger: GAGCCACACATTAAGCGACCAATGAATGCATTCATG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCATGAATGCATTCATTaGTCGCTTAATGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGHECIH*SLNVWL
Trigger: GAGCCACACATTAAGCGACCAATGAATGCATTCATG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATGGCTTTTTGCATCCTaGGGATTTTGCAATGAACTC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGWLFAS*GFCNEL
Trigger: GAGTTCATTGCAAAATCCCCAGGATGCAAAAAGCCA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGCTTCCGTACCTTACTaGAAAAGACACTGCTTCATA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGASVPY*KRHCFI
Trigger: TATGAAGCAGTGTCTTTTCCAGTAAGGTACGGAAGC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTCCGAAGAAGCAGCCTaGCTTCAGAAGGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCSEEAA*LQKEKK
Trigger: TTTCTTTTCCTTCTGAAGCCAGGCTGCTTCTTCGGA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATTTCTTTGCAGTTGTTaGCACTTGGTACAGGACTTC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGFLCSC*HLVQDF
Trigger: GAAGTCCTGTACCAAGTGCCAACAACTGCAAAGAAA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCTCACTTTATGCTTGTaGTTCTTCAGGAATAAGAAA +
Preference number: 4 (lower is better)
Translates to: LLWCVYVIPHHALMARQQLTLCL*FFRNKK
Trigger: TTTCTTATTCCTGAAGAACCACAAGCATAAAGTGAG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 72 bp ATGTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTaGTTCCTGATCTTAAGGGAAATTCCTGTAGCATTT +
Preference number: 4 (lower is better)
Translates to: MLNIVVTVGSLA*FLILREIPVAF
Trigger: AAATGCTACAGGAATTTCCCTTAAGATCAGGAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCAGTCAGCATCTTGTTaGATGGTACTGACAAGTGTT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCQSASC*MVLTSV
Trigger: AACACTTGTCAGTACCATTCAACAAGATGCTGACTG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCCATTGTTGATGGAATaGACTGTACGGGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWPLLME*TVRGSY
Trigger: ATAACTACCCCGTACAGTTCATTCCATCAACAATGG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTTCACTGCTATAGTCTaGTTTGGGGTCATCTTCATA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGFTAIV*FGVIFI
Trigger: TATGAAGATGACCCCAAATCAGACTATAGCAGTGAA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTTAAGACCATTCTGCTaGTGTAATTGTGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCLRPFC*CNCGAT
Trigger: TGTGGCTCCACAATTACATCAGCAGAATGGTCTTAA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTAACTATCCCATTCACTaGCATTCTCCCACTAAACCT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCNYPIH*HSPTKP
Trigger: AGGTTTAGTGGGAGAATGTCAGTGAATGGGATAGTT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGATGACTTAAGGAAATaGTGCAAGTGCTTTTGTGAA +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPDDLRK*CKCFCE
Trigger: TTCACAAAAGCACTTGCATCATTTCCTTAAGTCATC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTACAAACTTTACACTTTaGAACAGCAGCCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCTNFTL*NSSQHV
Trigger: GACATGCTGGCTGCTGTTTCAAAGTGTAAAGTTTGT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCACCACCTCCCAGCCTaGTGTTTTATAGAGATAAAA +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWHHLPA*CFIEIK
Trigger: TTTTATCTCTATAAAACATCAGGCTGGGAGGTGGTG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528252.5
CDS-3UTR TCA 90 bp GATTACCCACTTCTAGCCAAGACGGAGGCTGAATTTACCCTCCTTCAGAAAAATTGTTTCACAGTAACTTaGAGATTTACCATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: DYPLLAKTEAEFTLLQKNCFTVT*RFTIQV
Trigger: CACCTGGATGGTAAATCTTCAAGTTACTGTGAAACA...ATTTTTCTGAAGGAGGGTAAATTCAGCCTCCGTCTTGGCTAGAAGTGGGTAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR TCA 90 bp TCCTTCAGAAAAATGTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTTGTTCGTACTCCAGAAATCTTaGAAGAAAGACTTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SFRKMLNIVVTVGSLALFVLQKS*KKDLPL
Trigger: AAGAGGCAAGTCTTTCTTTCAAGATTTCTGGAGTAC...GAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAACATTTTTCTGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGAGATTAATTTTGTaGTGCTGTTGCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGRRLIL*CCCRSC
Trigger: GCAACTTCTGCAACAGCAGCACAAAATTAATCTCCT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTTTCCTTTTCATTCCTaGAGCTGTTCAGCCCCATAT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCFPFHS*SCSAPY
Trigger: ATATGGGGCTGAACAGCTGCAGGAATGAAAAGGAAA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTTTCCTTTTCATTCCTaGAGCTGTTCAGCCCCATAT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWFPFHS*SCSAPY
Trigger: ATATGGGGCTGAACAGCTGCAGGAATGAAAAGGAAA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGGGCTTCATTTTCACTaGTATAGTCTGATTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCGLHFH*YSLIWG
Trigger: ACCCCAAATCAGACTATAGCAGTGAAAATGAAGCCC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTATCTCACGTCAATACTaGACAACAAAATCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPISRQY*TTKSKK
Trigger: CTTCTTGGATTTTGTTGTGCAGTATTGACGTGAGAT...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAATGGAGAGGTGGCTTaGTTGGAAGACATTCTTAAA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGNGEVA*LEDILK
Trigger: TTTAAGAATGTCTTCCAAGCAAGCCACCTCTCCATT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396356.7
CDS-3UTR GCA 90 bp ATGTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTTGTTCCTGATCTTAAGGTTATTCGGGCCAGTATaGAATGAATCAGAAAACTAC +
Preference number: 4 (lower is better)
Translates to: MLNIVVTVGSLALFLILRLFGPV*NESENY
Trigger: GTAGTTTTCTGATTCATTGCATACTGGCCCGAATAA...CCTTAAGATCAGGAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCTCCAAGAAGTTCACTaGTATTTAGTCTTTCCATTT +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLQEVH*YLVFPF
Trigger: AAATGGAAAGACTAAATACCAGTGAACTTCTTGGAG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGCCCCATATTATTTATaGAGGACAGTTTCCCGTCAA +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCAPYYL*RTVSRQ
Trigger: TTGACGGGAAACTGTCCTCCATAAATAATATGGGGC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCATGAATGCATTCATTaGTCGCTTAATGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCHECIH*SLNVWL
Trigger: GAGCCACACATTAAGCGACCAATGAATGCATTCATG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTTGGACCAACATCTATaGATAGAGAACAAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLDQHL*IENKKE
Trigger: TTCCTTTTTGTTCTCTATCCATAGATGTTGGTCCAA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGCTTCCGTACCTTACTaGAAAAGACACTGCTTCATA +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWASVPY*KRHCFI
Trigger: TATGAAGCAGTGTCTTTTCCAGTAAGGTACGGAAGC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAACGCTCAATAGGATATaGCATCAGAAACAGAACATC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGTLNRI*HQKQNI
Trigger: GATGTTCTGTTTCTGATGCCATATCCTATTGAGCGT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATTGTTCATGAGCTTTTaGAAAGCAATCTGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGLFMSF*KAICPQ
Trigger: TTGGGGACAGATTGCTTTCCAAAAGCTCATGAACAA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTATTATCACCCAAAGATaGCATGTTGAACATATCAGG +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPIITQR*HVEHIR
Trigger: CCTGATATGTTCAACATGCCATCTTTGGGTGATAAT...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 72 bp AGAAAAATGTTGAATATAGTGGTGACAGTGGGCAGCTaGGCCTTGTTCCTGATCTTAAGGGAAATTCCTGTA +
Preference number: 4 (lower is better)
Translates to: RKMLNIVVTVGS*ALFLILREIPV
Trigger: TACAGGAATTTCCCTTAAGATCAGGAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAACATTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR TCA 90 bp ACTTATAATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACCTCATTCTTTGCTGAGATaGCAGAACGCTGTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: TYNNFHALQNRIPVSSQPHSLLR*QNAVPV
Trigger: GACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATG...AGGTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTATTATAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTTCTTGAATCTAAACTaGCATGACGGGACGTTTATT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGFLNLN*HDGTFI
Trigger: AATAAACGTCCCGTCATGTCAGTTTAGATTCAAGAA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGATTTGAAGATACTATaGAATAGGGAGCACCGCAAA +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWDLKIL*NREHRK
Trigger: TTTGCGGTGCTCCCTATTTCATAGTATCTTCAAATC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACTTCATATCTGCCAATaGAATAGAAAAGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGLHICQ*NRKVVS
Trigger: GCTGACAACTTTTCTATTTCATTGGCAGATATGAAG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCTTCATATCTGCCAATaGAATAGAAAAGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGLHICQ*NRKVVS
Trigger: GCTGACAACTTTTCTATTTCATTGGCAGATATGAAG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGTCTCTTCCTGGTGTTaGCTTTTCCATTTACCTAAA +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWVSSWC*LFHLPK
Trigger: TTTAGGTAAATGGAAAAGTCAACACCAGGAAGAGAC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528252.5
ENST00000655819.1
CDS-3UTR TCA 90 bp CCCTCCAAAATAGAATACCTGTTTCTTCACAACCTTGACAGAAGAATGTGTTTCCGGGCCAGTATGCAATaGATCAGAAAACTACAACTC +
Preference number: 4 (lower is better)
Translates to: PSKIEYLFLHNLDRRMCFRASMQ*IRKLQL
Trigger: GAGTTGTAGTTTTCTGATTCATTGCATACTGGCCCG...GAAACACATTCTTCTGTCAAGGTTGTGAAGAAACAGGTATTCTATTTTGGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR GCA 90 bp AGACTTATAATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACATCCTCTCCATCAGCTaGACAGGCAAATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RLIITSMPSKIEYLFLHNILSIS*TGKWRG
Trigger: ACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGAT...GTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTATTATAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR GCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAAGTAGTTTTTCCATaGAGGAGGAATCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGKVVFP*RRNPLV
Trigger: AACAAGAGGATTCCTCCTGCATGGAAAAACTACTTT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAAAGTAGTTTTTCCATaGAGGAGGAATCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGKVVFP*RRNPLV
Trigger: AACAAGAGGATTCCTCCTGCATGGAAAAACTACTTT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTAGGAGATTAATTTTGTaGTGCTGTTGCAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCRRLIL*CCCRSC
Trigger: GCAACTTCTGCAACAGCAGCACAAAATTAATCTCCT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTCAGAGGTGGATTTTTaGCTTTGTAGTGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWSEVDF*LCSGIH
Trigger: ATGAATGCCACTACAAAGGCAAAAATCCACCTCTGA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp CTTGGCCTTGTTCCTGATCTTAAGGGAAATTCCTGTAGCATTTCTTCATATGTAGATTTACCATCCAGGTaGCAACAATTCGCCATACAC +
Preference number: 4 (lower is better)
Translates to: LGLVPDLKGNSCSISSYVDLPSR*QQFAIH
Trigger: GTGTATGGCGAATTGTTGGCACCTGGATGGTAAATC...TACATATGAAGAAATGCTACAGGAATTTCCCTTAAGATCAGGAACAAGGCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CCA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTAAAATAAATAGCAAGTaGACCCTTGACATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPKINSK*TLDILE
Trigger: TTCCAGAATGTCAAGGGTCCACTTGCTATTTATTTT...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGCGTTCATATTGCCATaGACACTGATTAGAAGAGTT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCAFILP*TLIRRV
Trigger: AACTCTTCTAATCAGTGTCCATGGCAATATGAACGC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATTATCACCCAAAGATaGCATGTTGAACATATCAGG +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGIITQR*HVEHIR
Trigger: CCTGATATGTTCAACATGCCATCTTTGGGTGATAAT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTAAAACAAGAGTGAACTaGGGAGGAGAGGTATATAAT +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCKTRVN*GGEVYN
Trigger: ATTATATACCTCTCCTCCTCAGTTCACTCTTGTTTT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTTCTTGAATCTAAACTaGCATGACGGGACGTTTATT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWFLNLN*HDGTFI
Trigger: AATAAACGTCCCGTCATGTCAGTTTAGATTCAAGAA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCTTCATATCTGCCAATaGAATAGAAAAGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCLHICQ*NRKVVS
Trigger: GCTGACAACTTTTCTATTTCATTGGCAGATATGAAG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR GCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGAAAGTAGTTTTTCCATaGAGGAGGAATCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWKVVFP*RRNPLV
Trigger: AACAAGAGGATTCCTCCTGCATGGAAAAACTACTTT...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR GCA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTATCTCACGTCAATACTaGACAACAAAATCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCISRQY*TTKSKK
Trigger: CTTCTTGGATTTTGTTGTGCAGTATTGACGTGAGAT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GAGGACTACTGGATCAAAAGAAAGTGTATATGTTGTTTTGACAGATGCTGTGAACTTGAGGTTAAATCCTaGGTCATTGCATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: EDYWIKRKCICCFDRCCELEVKS*VIASSP
Trigger: TGGAGAGGATGCAATGACCCAGGATTTAACCTCAAG...TTCACAGCATCTGTCAAAACAACATATACACTTTCTTTTGATCCAGTAGTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCTCCAAGAAGTTCACTaGTATTTAGTCTTTCCATTT +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGLQEVH*YLVFPF
Trigger: AAATGGAAAGACTAAATACCAGTGAACTTCTTGGAG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAAAATAAATAGCAAGTaGACCCTTGACATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGKINSK*TLDILE
Trigger: TTCCAGAATGTCAAGGGTCCACTTGCTATTTATTTT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTTGGACCAACATCTATaGATAGAGAACAAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGLDQHL*IENKKE
Trigger: TTCCTTTTTGTTCTCTATCCATAGATGTTGGTCCAA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCTCACTTTATGCTTGTaGTTCTTCAGGAATAAGAAA +
Preference number: 4 (lower is better)
Translates to: CNCGATNACGLFNNSLLGLTLCL*FFRNKK
Trigger: TTTCTTATTCCTGAAGAACCACAAGCATAAAGTGAG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 72 bp CGCTCAATAGGATATGGCATCAGAAACAGAACATCATaGGCAGGAATAACAGACAGAAGTTGTTTATTAGGG +
Preference number: 4 (lower is better)
Translates to: RSIGYGIRNRTS*AGITDRSCLLG
Trigger: CCCTAATAAACAACTTCTGTCTGTTATTCCTGCCAATGATGTTCTGTTTCTGATGCCATATCCTATTGAGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
3UTR CAA 72 bp ATCACGGCATATACATTATCACCCAAAGATGGCATGTaGAACATATCAGGAAAGCACCTTGTGCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: ITAYTLSPKDGM*NISGKHLVQKG
Trigger: TCCTTTTTGCACAAGGTGCTTTCCTGATATGTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCTCCAAGAAGTTCACTaGTATTTAGTCTTTCCATTT +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWLQEVH*YLVFPF
Trigger: AAATGGAAAGACTAAATACCAGTGAACTTCTTGGAG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CCA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTTGGACCAACATCTATaGATAGAGAACAAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWLDQHL*IENKKE
Trigger: TTCCTTTTTGTTCTCTATCCATAGATGTTGGTCCAA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR TCA 90 bp AGACTTATAATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACCAGTCAGCATCTTGTTaGATGGTACTGACAAGTGTT +
Preference number: 4 (lower is better)
Translates to: RLIITSMPSKIEYLFLHNQSASC*MVLTSV
Trigger: AACACTTGTCAGTACCATTCAACAAGATGCTGACTG...GTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTATTATAAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR TCA 90 bp AGACTTATAATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACGTTTCTTCACAACCTTaGCAGAAGAATGTGTTTCAC +
Preference number: 4 (lower is better)
Translates to: RLIITSMPSKIEYLFLHNVSSQP*QKNVFH
Trigger: GTGAAACACATTCTTCTGTCAAGGTTGTGAAGAAAC...GTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTATTATAAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CCA 90 bp ATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACCTTGACAGACAAGAAGAGGACTACTaGATCAAAAGAAAGTGTATA +
Preference number: 4 (lower is better)
Translates to: ITSMPSKIEYLFLHNLDRQEEDY*IKRKCI
Trigger: TATACACTTTCTTTTGATCCAGTAGTCCTCTTCTTG...TCTGTCAAGGTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530378.5
3UTR CAA 72 bp AATGAGCTAGAATTGTCATCTCAATATAGTTTTAATTaGCATTACTTGGATTACCCACTTCTAGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: NELELSSQYSFN*HYLDYPLLAKT
Trigger: CGTCTTGGCTAGAAGTGGGTAATCCAAGTAATGCAAATTAAAACTATATTGAGATGACAATTCTAGCTCATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS CCA 90 bp TCTGCCTCCCTCGCTCTCGAGATCGCTCGCTCCGTCCCGGTTACCTaGGCGGGCTCCAGGATGGTACCGCGCGGGAGGGCTCCTTGTGCG +
Preference number: 5 (lower is better)
Translates to: SASLALEIARSVPVT*AGSRMVPRGRAPCA
Trigger: CGCACAAGGAGCCCTCCCGCGCGGTACCATCCTGGAGCCCGCCCAGGTAACCGGGACGGAGCGAGCGATCTCGAGAGCGAGGGAGGCAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525835.5
CDS-3UTR CAA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCATGGCCCACGAGCCTaGGGCTTCAGGTTTGGCCGC +
Preference number: 5 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSHGPRA*GFRFGR
Trigger: GCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCCATG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTCGGCAAGACTCCCTTaGCGGCGCTCTGGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSSARLP*RRSGVP
Trigger: TGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS GCA 90 bp GTGTGGCTCGCTGCTGGCACGGCCGCGGGCGTCCCTGTAGACTCGTaGTTCAGCCACAGTGGCACCTCCTGTTGGCCAACAATAATACTG +
Preference number: 5 (lower is better)
Translates to: VWLAAGTAAGVPVDS*FSHSGTSCWPTIIL
Trigger: CAGTATTATTGTTGGCCAACAGGAGGTGCCACTGTGGCTGAAGCACGAGTCTACAGGGACGCCCGCGGCCGTGCCAGCAGCGAGCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527619.6
ENST00000527840.1
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS-3UTR CAA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTACAAAAACTCCTCAGTaGGCACTGACAGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSTKTPQ*ALTASG
Trigger: CCCGGAGGCTGTCAGTGCCAACTGAGGAGTTTTTGT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTGCTTCATCCTTAACTaGAGTTACAGGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSCFILN*SYRAGP
Trigger: GGGACCAGCCCTGTAACTCAAGTTAAGGATGAAGCA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTGGAATCTGAGGCTGTaGCCCCACAGTAAAGAACTG +
Preference number: 5 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSWNLRL*PHSKEL
Trigger: CAGTTCTTTACTGTGGGGCAACAGCCTCAGATTCCA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS GCA 90 bp GGGCGGGCTCCAGGATGGTACCGCGCGGGAGGGCTCCTTGTGCGCTaGGCCGCAGGAGTAAATGGCATTAAAGAAAAAGGGAAAGATACA +
Preference number: 5 (lower is better)
Translates to: GRAPGWYRAGGLLVR*AAGVNGIKEKGKDT
Trigger: TGTATCTTTCCCTTTTTCTTTAATGCCATTTACTCCTGCGGCGCAGCGCACAAGGAGCCCTCCCGCGCGGTACCATCCTGGAGCCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525835.5
CDS TCA 90 bp CTGGGCTCCGGGCTGGCCGAGGTGCTAGAGCAGTCAGATGTCATCTaGGGCGATGGTGTGGTAGTTGCCATAGTGATAGCACCAGGATAC +
Preference number: 5 (lower is better)
Translates to: LGSGLAEVLEQSDVI*GDGVVVAIVIAPGY
Trigger: GTATCCTGGTGCTATCACTATGGCAACTACCACACCATCGCCTCAGATGACATCTGACTGCTCTAGCACCTCGGCCAGCCCGGAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS-3UTR CAA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCCAGTCAGCATCTTGTaGAATGGTACTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSPVSIL*NGTDKC
Trigger: ACACTTGTCAGTACCATTCAACAAGATGCTGACTGG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTGCAGTTGTTGGCACTaGGTACAGGACTTCTCATAT +
Preference number: 5 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSCSCWH*VQDFSY
Trigger: ATATGAGAAGTCCTGTACCAAGTGCCAACAACTGCA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS CCA 90 bp GGCAGCAGCAGCTGCTGCCAGAGTCCGCTGGTCATGTGGAAAAATTaGGATCATGAGCGGAGGCATGTGACCCTGAACCTGGATCTGTTG +
Preference number: 5 (lower is better)
Translates to: GSSSCCQSPLVMWKN*DHERRHVTLNLDLL
Trigger: CAACAGATCCAGGTTCAGGGTCACATGCCTCCGCTCATGATCCCAATTTTTCCACATGACCAGCGGACTCTGGCAGCAGCTGCTGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CCA 90 bp GGTTCTGGGTGGGAGACGTTGGGGACTTTACAGGCTCTGCTGTCTTaGGTCGGGATGAGAGATTCAGAGGCTGTGCTGCTGCTTCATCCT +
Preference number: 5 (lower is better)
Translates to: GSGWETLGTLQALLS*VGMRDSEAVLLLHP
Trigger: AGGATGAAGCAGCAGCACAGCCTCTGAATCTCTCATCCCGACCCAAGACAGCAGAGCCTGTAAAGTCCCCAACGTCTCCCACCCAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000524650.1
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS-3UTR CAA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTGCAGGAGATTAATTTaGTGCTGCTGTTGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSCRRLI*CCCCRS
Trigger: ACTTCTGCAACAGCAGCACAAAATTAATCTCCTGCA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGAAGAGGAATCCCTGTaGGGCAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMAREEESL*GSSSCC
Trigger: GCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTTC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTAAGATTTTGCTAATGTaGGAGTTATGCATGTCGGGG +
Preference number: 5 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSKILLM*ELCMSG
Trigger: CCCCGACATGCATAACTCCAACATTAGCAAAATCTT...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTTGCACTGTGGCAACCTaGTTCATTCCTTACAATATC +
Preference number: 5 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSCTVAT*FIPYNI
Trigger: GATATTGTAAGGAATGAACAAGGTTGCCACAGTGCA...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCCACGAGCCTTGGGCTTCAGGTTTGGCCGCAGGACTCTCCTGCCTGGCAGTCACAAACTTTACACTTaGAAACAGCAGCCAGCATGT +
Preference number: 5 (lower is better)
Translates to: GPRALGFRFGRRTLLPGSHKLYT*KQQPAC
Trigger: ACATGCTGGCTGCTGTTTCAAAGTGTAAAGTTTGTG...ACTGCCAGGCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS TCA 90 bp CAGCTGCTGCCAGAGTCCGCTGGTCATGTGGAAAAATTGGGATCATaGGCGGAGGCATGTGACCCTGAACCTGGATCTGTTGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: QLLPESAGHVEKLGS*AEACDPEPGSVAAG
Trigger: TCCTGCAGCAACAGATCCAGGTTCAGGGTCACATGCCTCCGCTCATGATCCCAATTTTTCCACATGACCAGCGGACTCTGGCAGCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS GCA 90 bp TTATTTATGGAGGACAGTTTCCCGTCAACACCATGTGGCTGTTGCTaGTGTTGCTCCCGCTGGATCTGCTCTCGCATCTTCCGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: LFMEDSFPSTPCGCC*CCSRWICSRIFRAS
Trigger: GGAGGCGCGGAAGATGCGAGAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTTGACGGGAAACTGTCCTCCATAAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CCA 90 bp CGGGCTGGCCGAGGTGCTAGAGCAGTCAGATGTCATCTGAGGCGATaGTGTGGTAGTTGCCATAGTGATAGCACCAGGATACACAACACC +
Preference number: 5 (lower is better)
Translates to: RAGRGARAVRCHLRR*CGSCHSDSTRIHNT
Trigger: GGTGTTGTGTATCCTGGTGCTATCACTATGGCAACTACCACACCATCGCCTCAGATGACATCTGACTGCTCTAGCACCTCGGCCAGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS-3UTR CAA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTCGGCAAGACTCCCTTaGCGGCGCTCTGGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNSARLP*RRSGVP
Trigger: TGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGAAGAGGAATCCCTGTaGGGCAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGEEESL*GSSSCC
Trigger: GCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTTC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTCTGGGTGGGAGACGTaGGGGACTTTACAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARSGWET*GTLQAL
Trigger: CAGAGCCTGTAAAGTCCCCAACGTCTCCCACCCAGA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTGGCTGTTGCTGCTGTaGCTCCCGCTGGATCTGCTC +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGWLLLL*LPLDLL
Trigger: GAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCCA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTAACTTGGCCTGGGCTTaGGTGTCAGGACCCTGGCAA +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARNLAWA*VSGPWQ
Trigger: TTGCCAGGGTCCTGACACCAAAGCCCAGGCCAAGTT...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTCGGCAAGACTCCCTTaGCGGCGCTCTGGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGSARLP*RRSGVP
Trigger: TGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATGAAGAGGAATCCCTGTaGGGCAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHEEESL*GSSSCC
Trigger: GCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTTC...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTCTGGGTGGGAGACGTaGGGGACTTTACAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGSGWET*GTLQAL
Trigger: CAGAGCCTGTAAAGTCCCCAACGTCTCCCACCCAGA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTGGCTGTTGCTGCTGTaGCTCCCGCTGGATCTGCTC +
Preference number: 5 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNWLLLL*LPLDLL
Trigger: GAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCCA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGAACACCATGTGGCTGTaGCTGCTGTTGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGNTMWL*LLLLPL
Trigger: CAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCCTTGGGCTTCAGGTTaGGCCGCAGGACTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGPWASG*AAGLSC
Trigger: GCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS TCA 90 bp GGGAGACGTTGGGGACTTTACAGGCTCTGCTGTCTTGGGTCGGGATaGGAGATTCAGAGGCTGTGCTGCTGCTTCATCCTTAACTTGAGT +
Preference number: 5 (lower is better)
Translates to: GRRWGLYRLCCLGSG*EIQRLCCCFILNLS
Trigger: ACTCAAGTTAAGGATGAAGCAGCAGCACAGCCTCTGAATCTCTCATCCCGACCCAAGACAGCAGAGCCTGTAAAGTCCCCAACGTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000524650.1
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS GCA 90 bp ATATTATTTATGGAGGACAGTTTCCCGTCAACACCATGTGGCTGTTaGTGCTGTTGCTCCCGCTGGATCTGCTCTCGCATCTTCCGCGCC +
Preference number: 5 (lower is better)
Translates to: ILFMEDSFPSTPCGC*CCCSRWICSRIFRA
Trigger: GGCGCGGAAGATGCGAGAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTTGACGGGAAACTGTCCTCCATAAATAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CCA 90 bp TGTTCATCATGCGCTGCCAGTAGCTGCTCCCGTAAACTGATCAGCTaGGTAATCATGGTGGAGAGCTGCCGTTCTTTTTCTGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: CSSCAASSCSRKLIS*VIMVESCRSFSARL
Trigger: GAGCCTGGCAGAAAAAGAACGGCAGCTCTCCACCATGATTACCCAGCTGATCAGTTTACGGGAGCAGCTACTGGCAGCGCATGATGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000531297.1
ENST00000655819.1
ENST00000683767.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGGAGAGGTGGCTTGCTaGGAAGACATTCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARGEVAC*EDILLQ
Trigger: CTGCAGAAGAATGTCTTCCAAGCAAGCCACCTCTCC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316399.10
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTATGGGAGGCCACATGTaGATCACTGCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARMGGHM*ITALFL
Trigger: AAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCAT...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTCTCGCAATCTGTTCTaGCTGTTGGCGAGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARSRNLF*LLASKV
Trigger: GACCTTGCTCGCCAACAGCAAGAACAGATTGCGAGA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGAGTTGATGGCATCTTaGCTCCAGGTGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARELMAS*LQVTPA
Trigger: TGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGACAGGCTCTGCTGTCTaGGGTCGGGATGAGAGATTC +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGTGSAV*GRDERF
Trigger: GAATCTCTCATCCCGACCCAAGACAGCAGAGCCTGT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTCTGGGTGGGAGACGTaGGGGACTTTACAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNSGWET*GTLQAL
Trigger: CAGAGCCTGTAAAGTCCCCAACGTCTCCCACCCAGA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTGGCTGTTGCTGCTGTaGCTCCCGCTGGATCTGCTC +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGWLLLL*LPLDLL
Trigger: GAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCCA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACAACACCATGTGGCTGTaGCTGCTGTTGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNNTMWL*LLLLPL
Trigger: CAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGACAAAAACTCCTCAGTaGGCACTGACAGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGTKTPQ*ALTASG
Trigger: CCCGGAGGCTGTCAGTGCCAACTGAGGAGTTTTTGT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTATCTGGTGTGGCGGTaGCTCTGGTGTGTGTATGTC +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARYLVWR*LWCVYV
Trigger: GACATACACACACCAGAGCAACCGCCACACCAGATA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTGGCAGTCACCACTGTaGAACCTTGCTGCTGAATGG +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARWQSPL*NLAAEW
Trigger: CCATTCAGCAGCAAGGTTCAACAGTGGTGACTGCCA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCCTTGGGCTTCAGGTTaGGCCGCAGGACTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPPWASG*AAGLSC
Trigger: GCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACATGGCCCACGAGCCTaGGGCTTCAGGTTTGGCCGC +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGHGPRA*GFRFGR
Trigger: GCGGCCAAACCTGAAGCCCAAGGCTCGTGGGCCATG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS GCA 90 bp TGGGAGTGCCAGTCTGCGTACACCTTCACCGCGTCTCATTACATCTaGCAGCCTCTCTCTCCCTCTCTCTTTCATTTCCACATTCCCTTT +
Preference number: 5 (lower is better)
Translates to: WECQSAYTFTASHYI*QPLSPSLFHFHIPF
Trigger: AAAGGGAATGTGGAAATGAAAGAGAGAGGGAGAGAGAGGCTGGCAGATGTAATGAGACGCGGTGAAGGTGTACGCAGACTGGCACTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524520.5
ENST00000525259.1
ENST00000530378.5
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATCGGCAAGACTCCCTTaGCGGCGCTCTGGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGSARLP*RRSGVP
Trigger: TGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGCAGGAGGAATCCTCTaGTTCAGTCCGAGTCATTTC +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARAGGIL*FSPSHF
Trigger: GAAATGACTCGGACTGAACAAGAGGATTCCTCCTGC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTTGGTGGCTGTGGAGTaGATGGCATCTTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGLVAVE*MASLLQ
Trigger: CTGGAGCAAAGATGCCATCAACTCCACAGCCACCAA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACACAGGCTCTGCTGTCTaGGGTCGGGATGAGAGATTC +
Preference number: 5 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNTGSAV*GRDERF
Trigger: GAATCTCTCATCCCGACCCAAGACAGCAGAGCCTGT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTCTGGGTGGGAGACGTaGGGGACTTTACAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGSGWET*GTLQAL
Trigger: CAGAGCCTGTAAAGTCCCCAACGTCTCCCACCCAGA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCTAGGGATGCTGCTTTaGTTTGGCAGATTGACAGGG +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARLGMLL*FGRLTG
Trigger: CCCTGTCAATCTGCCAAACAAAAGCAGCATCCCTAG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAACACCATGTGGCTGTaGCTGCTGTTGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGNTMWL*LLLLPL
Trigger: CAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCCGAGACCTCATCAGTaGCTTATACTCCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGPRPHQ*LILPNP
Trigger: CGGATTGGGGAGTATAAGCAACTGATGAGGTCTCGG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTGGAATCTGAGGCTGTaGCCCCACAGTAAAGAACTG +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARWNLRL*PHSKEL
Trigger: CAGTTCTTTACTGTGGGGCAACAGCCTCAGATTCCA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATACAAAAACTCCTCAGTaGGCACTGACAGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHTKTPQ*ALTASG
Trigger: CCCGGAGGCTGTCAGTGCCAACTGAGGAGTTTTTGT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTAACAGGCAAACACAATaGGGTCCATGCACTGTGGCA +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARNRQTQ*GPCTVA
Trigger: TGCCACAGTGCATGGACCCAATTGTGTTTGCCTGTT...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTATCTGGTGTGGCGGTaGCTCTGGTGTGTGTATGTC +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGYLVWR*LWCVYV
Trigger: GACATACACACACCAGAGCAACCGCCACACCAGATA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAACTTGGCCTGGGCTTaGGTGTCAGGACCCTGGCAA +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGNLAWA*VSGPWQ
Trigger: TTGCCAGGGTCCTGACACCAAAGCCCAGGCCAAGTT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS GCA 90 bp GGTGCTAGAGCAGTCAGATGTCATCTGAGGCGATGGTGTGGTAGTTaGCATAGTGATAGCACCAGGATACACAACACCTGTTCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: GARAVRCHLRRWCGS*HSDSTRIHNTCSCG
Trigger: ACCACAGGAACAGGTGTTGTGTATCCTGGTGCTATCACTATGGCAACTACCACACCATCGCCTCAGATGACATCTGACTGCTCTAGCACC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS-3UTR CAA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATATGGGAGGCCACATGTaGATCACTGCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHMGGHM*ITALFL
Trigger: AAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCAT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGCAGGAGGAATCCTCTaGTTCAGTCCGAGTCATTTC +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGAGGIL*FSPSHF
Trigger: GAAATGACTCGGACTGAACAAGAGGATTCCTCCTGC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGAAGAGGAATCCCTGTaGGGCAGCAGCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGEEESL*GSSSCC
Trigger: GCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTTC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTTGGTGGCTGTGGAGTaGATGGCATCTTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQLVAVE*MASLLQ
Trigger: CTGGAGCAAAGATGCCATCAACTCCACAGCCACCAA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCTTTTGTTTGGCAGATaGACAGGGCTGGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARLLFGR*TGLVLL
Trigger: CAGCAAAACCAGCCCTGTCAATCTGCCAAACAAAAG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACTTCTCTAAGTGGATCTaGCTTAGCCGGGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNFSKWI*LSRACS
Trigger: AGAGCAGGCCCGGCTAAGCAAGATCCACTTAGAGAA...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTGGAATCTGAGGCTGTaGCCCCACAGTAAAGAACTG +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGWNLRL*PHSKEL
Trigger: CAGTTCTTTACTGTGGGGCAACAGCCTCAGATTCCA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCCTTGGGCTTCAGGTTaGGCCGCAGGACTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCPWASG*AAGLSC
Trigger: GCAGGAGAGTCCTGCGGCCAAACCTGAAGCCCAAGG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCTAAAGAACAGTCCTTaGTTCTCCACCAGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARLKNSP*FSTSPE
Trigger: TTCTGGGCTGGTGGAGAACAAAGGACTGTTCTTTAG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTAACTTGGCCTGGGCTTaGGTGTCAGGACCCTGGCAA +
Preference number: 5 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPNLAWA*VSGPWQ
Trigger: TTGCCAGGGTCCTGACACCAAAGCCCAGGCCAAGTT...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGCTAAGCATTCTAATTaGCTACAAGCTGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARAKHSN*LQAGGG
Trigger: CCCTCCTCCAGCTTGTAGCAAATTAGAATGCTTAGC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCAGTGGCACCTCCTGTaGGCCAACAATAATACTGCT +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGQWHLL*ANNNTA
Trigger: AGCAGTATTATTGTTGGCCAACAGGAGGTGCCACTG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGATGGGAGGCCACATGTaGATCACTGCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGMGGHM*ITALFL
Trigger: AAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCAT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGTCCCAGTCAGCATCTaGTTGAATGGTACTGACAAG +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGVPVSI*LNGTDK
Trigger: CTTGTCAGTACCATTCAACAAGATGCTGACTGGGAC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGAATCTGTTCTTGCTGTaGGCGAGCAAGGTCCATTTG +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGNLFLL*ASKVHL
Trigger: CAAATGGACCTTGCTCGCCAACAGCAAGAACAGATT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTCTCGCAATCTGTTCTaGCTGTTGGCGAGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGSRNLF*LLASKV
Trigger: GACCTTGCTCGCCAACAGCAAGAACAGATTGCGAGA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCAGAAGTTGCTGCTGTaGTCTCGCAATCTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGQKLLL*SRNLFL
Trigger: CAAGAACAGATTGCGAGACAACAGCAGCAACTTCTG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCTGCTGTTGCAGAAGTaGCTGCTGTTGTCTCGCAAT +
Preference number: 5 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNLLLQK*LLLSRN
Trigger: ATTGCGAGACAACAGCAGCAACTTCTGCAACAGCAG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGAGTTGATGGCATCTTaGCTCCAGGTGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGELMAS*LQVTPA
Trigger: TGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTTGGTGGCTGTGGAGTaGATGGCATCTTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLVAVE*MASLLQ
Trigger: CTGGAGCAAAGATGCCATCAACTCCACAGCCACCAA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTGCTTCATCCTTAACTaGAGTTACAGGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQCFILN*SYRAGP
Trigger: GGGACCAGCCCTGTAACTCAAGTTAAGGATGAAGCA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTCTGGGTGGGAGACGTaGGGGACTTTACAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGSGWET*GTLQAL
Trigger: CAGAGCCTGTAAAGTCCCCAACGTCTCCCACCCAGA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCTTTTGTTTGGCAGATaGACAGGGCTGGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGLLFGR*TGLVLL
Trigger: CAGCAAAACCAGCCCTGTCAATCTGCCAAACAAAAG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCTGTTGCTGCTGTaGCTCCCGCTGGATCTGCTC +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCWLLLL*LPLDLL
Trigger: GAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCCA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAACACCATGTGGCTGTaGCTGCTGTTGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGNTMWL*LLLLPL
Trigger: CAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTTCTCTAAGTGGATCTaGCTTAGCCGGGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGFSKWI*LSRACS
Trigger: AGAGCAGGCCCGGCTAAGCAAGATCCACTTAGAGAA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCCGAGACCTCATCAGTaGCTTATACTCCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGPRPHQ*LILPNP
Trigger: CGGATTGGGGAGTATAAGCAACTGATGAGGTCTCGG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACAACAGGCAAACACAATaGGGTCCATGCACTGTGGCA +
Preference number: 5 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNNRQTQ*GPCTVA
Trigger: TGCCACAGTGCATGGACCCAATTGTGTTTGCCTGTT...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTGGCAGTCACCACTGTaGAACCTTGCTGCTGAATGG +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGWQSPL*NLAAEW
Trigger: CCATTCAGCAGCAAGGTTCAACAGTGGTGACTGCCA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCCTCTCCCTAATGAGTaGGTAGAGGTCAATTCTTTG +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARPLPNE*VEVNSL
Trigger: CAAAGAATTGACCTCTACCAACTCATTAGGGAGAGG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATACAACAGAGTTGCAGTaGTCCCAACAGCCCTACACA +
Preference number: 5 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHTTELQ*SQQPYT
Trigger: TGTGTAGGGCTGTTGGGACAACTGCAACTCTGTTGT...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCTGCAGAGCCATTCATaGCTTTACTTCCCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGLQSHS*LYFPLH
Trigger: ATGCAGAGGGAAGTAAAGCAATGAATGGCTCTGCAG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCAGTGGCACCTCCTGTaGGCCAACAATAATACTGCT +
Preference number: 5 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNQWHLL*ANNNTA
Trigger: AGCAGTATTATTGTTGGCCAACAGGAGGTGCCACTG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGGAGAGGTGGCTTGCTaGGAAGACATTCTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGGEVAC*EDILLS
Trigger: TGAAAGAAGAATGTCTTCCAAGCAAGCCACCTCTCC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000528429.5
CDS GCA 90 bp AGCTGCTCCCGTAAACTGATCAGCTGGGTAATCATGGTGGAGAGCTaGCGTTCTTTTTCTGCCAGGCTCTCAGGTGTACCTTTAATTTCT +
Preference number: 5 (lower is better)
Translates to: SCSRKLISWVIMVES*RSFSARLSGVPLIS
Trigger: AGAAATTAAAGGTACACCTGAGAGCCTGGCAGAAAAAGAACGGCAGCTCTCCACCATGATTACCCAGCTGATCAGTTTACGGGAGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000531297.1
ENST00000655819.1
ENST00000683767.1
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCCTCTTCCTTTTCCCTaGAGGTTAAATCCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQPLPFP*RLNPGS
Trigger: TGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCCAGTCAGCATCTTGTaGAATGGTACTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGPVSIL*NGTDKC
Trigger: ACACTTGTCAGTACCATTCAACAAGATGCTGACTGG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGTCCCAGTCAGCATCTaGTTGAATGGTACTGACAAG +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQVPVSI*LNGTDK
Trigger: CTTGTCAGTACCATTCAACAAGATGCTGACTGGGAC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACGTCCCAGTCAGCATCTaGTTGAATGGTACTGACAAG +
Preference number: 5 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNVPVSI*LNGTDK
Trigger: CTTGTCAGTACCATTCAACAAGATGCTGACTGGGAC...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTCTCGCAATCTGTTCTaGCTGTTGGCGAGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPSRNLF*LLASKV
Trigger: GACCTTGCTCGCCAACAGCAAGAACAGATTGCGAGA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GGCCTGAGCCCCATCACGGCATATACATTATCACCCAAAGATGGCATGTTGAACCAGAAGTTGCTGCTGTaGTCTCGCAATCTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GLSPITAYTLSPKDGMLNQKLLL*SRNLFL
Trigger: CAAGAACAGATTGCGAGACAACAGCAGCAACTTCTG...GTTCAACATGCCATCTTTGGGTGATAATGTATATGCCGTGATGGGGCTCAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCAGAAGTTGCTGCTGTaGTCTCGCAATCTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQQKLLL*SRNLFL
Trigger: CAAGAACAGATTGCGAGACAACAGCAGCAACTTCTG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGAGTTGATGGCATCTTaGCTCCAGGTGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPELMAS*LQVTPA
Trigger: TGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTTGGTGGCTGTGGAGTaGATGGCATCTTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPLVAVE*MASLLQ
Trigger: CTGGAGCAAAGATGCCATCAACTCCACAGCCACCAA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTGCTTCATCCTTAACTaGAGTTACAGGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGCFILN*SYRAGP
Trigger: GGGACCAGCCCTGTAACTCAAGTTAAGGATGAAGCA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACAGGCTCTGCTGTCTaGGGTCGGGATGAGAGATTC +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGTGSAV*GRDERF
Trigger: GAATCTCTCATCCCGACCCAAGACAGCAGAGCCTGT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAACAGGCTCTGCTGTCTaGGGTCGGGATGAGAGATTC +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGTGSAV*GRDERF
Trigger: GAATCTCTCATCCCGACCCAAGACAGCAGAGCCTGT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTCTGGGTGGGAGACGTaGGGGACTTTACAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWSGWET*GTLQAL
Trigger: CAGAGCCTGTAAAGTCCCCAACGTCTCCCACCCAGA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCTTTTGTTTGGCAGATaGACAGGGCTGGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQLLFGR*TGLVLL
Trigger: CAGCAAAACCAGCCCTGTCAATCTGCCAAACAAAAG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCTAGGGATGCTGCTTTaGTTTGGCAGATTGACAGGG +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLGMLL*FGRLTG
Trigger: CCCTGTCAATCTGCCAAACAAAAGCAGCATCCCTAG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGAAAAGGGCAGGGGAGTaGAGACTAGATAGGATATCT +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGKRAGE*RLDRIS
Trigger: AGATATCCTATCTAGTCTCAACTCCCCTGCCCTTTT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGAACACCATGTGGCTGTaGCTGCTGTTGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWNTMWL*LLLLPL
Trigger: CAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTT...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTAACACCATGTGGCTGTaGCTGCTGTTGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCNTMWL*LLLLPL
Trigger: CAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTGTTTTCCATCTTCATTaGACTTTCCCGTTAACTGGG +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARVFHLH*TFPLTG
Trigger: CCCAGTTAACGGGAAAGTCAAATGAAGATGGAAAAC...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCCGAGACCTCATCAGTaGCTTATACTCCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPPRPHQ*LILPNP
Trigger: CGGATTGGGGAGTATAAGCAACTGATGAGGTCTCGG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTGGAATCTGAGGCTGTaGCCCCACAGTAAAGAACTG +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGWNLRL*PHSKEL
Trigger: CAGTTCTTTACTGTGGGGCAACAGCCTCAGATTCCA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAACAAAAACTCCTCAGTaGGCACTGACAGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGTKTPQ*ALTASG
Trigger: CCCGGAGGCTGTCAGTGCCAACTGAGGAGTTTTTGT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAACAGGCAAACACAATaGGGTCCATGCACTGTGGCA +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGNRQTQ*GPCTVA
Trigger: TGCCACAGTGCATGGACCCAATTGTGTTTGCCTGTT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATCTAAAGAACAGTCCTTaGTTCTCCACCAGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHLKNSP*FSTSPE
Trigger: TTCTGGGCTGGTGGAGAACAAAGGACTGTTCTTTAG...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTGCAGTTGTTGGCACTaGGTACAGGACTTCTCATAT +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGCSCWH*VQDFSY
Trigger: ATATGAGAAGTCCTGTACCAAGTGCCAACAACTGCA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGGCCTCACTTTATGCTaGTGGTTCTTCAGGAATAAG +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGGLTLC*WFFRNK
Trigger: CTTATTCCTGAAGAACCACAAGCATAAAGTGAGGCC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCAACCTTTCATGTCCTaGAAGCTCACCATGACCTTT +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGQPFMS*KLTMTF
Trigger: AAAGGTCATGGTGAGCTTCAAGGACATGAAAGGTTG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527619.6
ENST00000655819.1
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGAAATGGAGAGGTGGCTaGCTTGGAAGACATTCTTCC +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQKWRGG*LGRHSS
Trigger: GGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTT...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655819.1
CDS-3UTR CAA 90 bp GAGGACTACTGGATCAAAAGAAAGTGTATATGTTGTTTTGACAGATGCTGTGAAGCCACACAGCGCGAATaGAGCCTCGGGGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: EDYWIKRKCICCFDRCCEATQRE*SLGASW
Trigger: CCAGGAAGCCCCGAGGCTCAATTCGCGCTGTGTGGC...TTCACAGCATCTGTCAAAACAACATATACACTTTCTTTTGATCCAGTAGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS TCA 90 bp CAGTTGAGAGTTTTATCATTGTATCCCTTTTCCTGCAATCTCACATaGCTCCAGAACCTGACTCAAACCAGGGCCCTCGGCCTAGGATCA +
Preference number: 5 (lower is better)
Translates to: QLRVLSLYPFSCNLT*LQNLTQTRALGLGS
Trigger: TGATCCTAGGCCGAGGGCCCTGGTTTGAGTCAGGTTCTGGAGTCATGTGAGATTGCAGGAAAAGGGATACAATGATAAAACTCTCAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS CCA 90 bp GTCCTTCAACTGTTTCTTCTCACTTTGCATTTAGTCTCTATTCTTTaGGGGATGCGGTTTAGGTCGGCTCGCAAGGGAAGCCCGTTTTGT +
Preference number: 5 (lower is better)
Translates to: VLQLFLLTLHLVSIL*GMRFRSARKGSPFC
Trigger: ACAAAACGGGCTTCCCTTGCGAGCCGACCTAAACCGCATCCCCCAAAGAATAGAGACTAAATGCAAAGTGAGAAGAAACAGTTGAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533658.5
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGAAATGGAGAGGTGGCTaGCTTGGAAGACATTCTTCT +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQKWRGG*LGRHSS
Trigger: AGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTT...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316399.10
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAATGGGAGGCCACATGTaGATCACTGCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGMGGHM*ITALFL
Trigger: AAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCAT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGTCCCAGTCAGCATCTaGTTGAATGGTACTGACAAG +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGVPVSI*LNGTDK
Trigger: CTTGTCAGTACCATTCAACAAGATGCTGACTGGGAC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGCAGGAGGAATCCTCTaGTTCAGTCCGAGTCATTTC +
Preference number: 5 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPAGGIL*FSPSHF
Trigger: GAAATGACTCGGACTGAACAAGAGGATTCCTCCTGC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAATCTGTTCTTGCTGTaGGCGAGCAAGGTCCATTTG +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGNLFLL*ASKVHL
Trigger: CAAATGGACCTTGCTCGCCAACAGCAAGAACAGATT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCAGAAGTTGCTGCTGTaGTCTCGCAATCTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGQKLLL*SRNLFL
Trigger: CAAGAACAGATTGCGAGACAACAGCAGCAACTTCTG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTGCAGGAGATTAATTTaGTGCTGCTGTTGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGCRRLI*CCCCRS
Trigger: ACTTCTGCAACAGCAGCACAAAATTAATCTCCTGCA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGAGTTGATGGCATCTTaGCTCCAGGTGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGELMAS*LQVTPA
Trigger: TGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTGCTTCATCCTTAACTaGAGTTACAGGGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPCFILN*SYRAGP
Trigger: GGGACCAGCCCTGTAACTCAAGTTAAGGATGAAGCA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGACAGGCTCTGCTGTCTaGGGTCGGGATGAGAGATTC +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWTGSAV*GRDERF
Trigger: GAATCTCTCATCCCGACCCAAGACAGCAGAGCCTGT...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCTTTTGTTTGGCAGATaGACAGGGCTGGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLLFGR*TGLVLL
Trigger: CAGCAAAACCAGCCCTGTCAATCTGCCAAACAAAAG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGGTTTTCCATCTTCATTaGACTTTCCCGTTAACTGGG +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGVFHLH*TFPLTG
Trigger: CCCAGTTAACGGGAAAGTCAAATGAAGATGGAAAAC...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGAAGATTTTGCTAATGTaGGAGTTATGCATGTCGGGG +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGKILLM*ELCMSG
Trigger: CCCCGACATGCATAACTCCAACATTAGCAAAATCTT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCGAGATCCTAAGATTTaGCTAATGTTGGAGTTATGC +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARRDPKI*LMLELC
Trigger: GCATAACTCCAACATTAGCAAAATCTTAGGATCTCG...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTTCTCTAAGTGGATCTaGCTTAGCCGGGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGFSKWI*LSRACS
Trigger: AGAGCAGGCCCGGCTAAGCAAGATCCACTTAGAGAA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATTCTCTAAGTGGATCTaGCTTAGCCGGGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGFSKWI*LSRACS
Trigger: AGAGCAGGCCCGGCTAAGCAAGATCCACTTAGAGAA...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCCGAGACCTCATCAGTaGCTTATACTCCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGPRPHQ*LILPNP
Trigger: CGGATTGGGGAGTATAAGCAACTGATGAGGTCTCGG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACCGAGACCTCATCAGTaGCTTATACTCCCCAATCCG +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGPRPHQ*LILPNP
Trigger: CGGATTGGGGAGTATAAGCAACTGATGAGGTCTCGG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGACAAAAACTCCTCAGTaGGCACTGACAGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWTKTPQ*ALTASG
Trigger: CCCGGAGGCTGTCAGTGCCAACTGAGGAGTTTTTGT...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTATCTGGTGTGGCGGTaGCTCTGGTGTGTGTATGTC +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGYLVWR*LWCVYV
Trigger: GACATACACACACCAGAGCAACCGCCACACCAGATA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCTAAAGAACAGTCCTTaGTTCTCCACCAGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLKNSP*FSTSPE
Trigger: TTCTGGGCTGGTGGAGAACAAAGGACTGTTCTTTAG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTGCAGTTGTTGGCACTaGGTACAGGACTTCTCATAT +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQCSCWH*VQDFSY
Trigger: ATATGAGAAGTCCTGTACCAAGTGCCAACAACTGCA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTGCATTTCTTTGCAGTaGTTGGCACTTGGTACAGGA +
Preference number: 5 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHCISLQ*LALGTG
Trigger: TCCTGTACCAAGTGCCAACAACTGCAAAGAAATGCA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTGCATTTCTTTGCAGTaGTTGGCACTTGGTACAGGA +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQCISLQ*LALGTG
Trigger: TCCTGTACCAAGTGCCAACAACTGCAAAGAAATGCA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGGGCCTCACTTTATGCTaGTGGTTCTTCAGGAATAAG +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQGLTLC*WFFRNK
Trigger: CTTATTCCTGAAGAACCACAAGCATAAAGTGAGGCC...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTACAACAGAGTTGCAGTaGTCCCAACAGCCCTACACA +
Preference number: 5 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPTTELQ*SQQPYT
Trigger: TGTGTAGGGCTGTTGGGACAACTGCAACTCTGTTGT...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTTGCACAGGCTGGCCTaGAACTCCTGTGCTCAAGGA +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWLHRLA*NSCAQG
Trigger: TCCTTGAGCACAGGAGTTCAAGGCCAGCCTGTGCAA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528252.5
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGAGGTGGCTTGCTaGGAAGACATTCTTCTCCGC +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWGEVAC*EDILLR
Trigger: GCGGAGAAGAATGTCTTCCAAGCAAGCCACCTCTCC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528252.5
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCTGCAGAGCCATTCATaGCTTTACTTCCCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGLQSHS*LYFPLH
Trigger: ATGCAGAGGGAAGTAAAGCAATGAATGGCTCTGCAG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS TCA 90 bp GAGATGACAGAACGCTGTCCCAGTCAGCATCTTGTTGAATGGTACTaGCAAGTGTTGGTAGCTCCTCAGAGTGAGGTTTGTTGTGCATTA +
Preference number: 5 (lower is better)
Translates to: EMTERCPSQHLVEWY*QVLVAPQSEVCCAL
Trigger: TAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000526673.1
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000529469.1
ENST00000530378.5
ENST00000533411.5
ENST00000533658.5
ENST00000533870.1
ENST00000655819.1
ENST00000683767.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTATGGGAGGCCACATGTaGATCACTGCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCMGGHM*ITALFL
Trigger: AAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCAT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCCAGTCAGCATCTTGTaGAATGGTACTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGPVSIL*NGTDKC
Trigger: ACACTTGTCAGTACCATTCAACAAGATGCTGACTGG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp AGACTTATAATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACTCGGCAAGACTCCCTTaGCGGCGCTCTGGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: RLIITSMPSKIEYLFLHNSARLP*RRSGVP
Trigger: TGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGA...GTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTATTATAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGCAGGAGGAATCCTCTaGTTCAGTCCGAGTCATTTC +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGAGGIL*FSPSHF
Trigger: GAAATGACTCGGACTGAACAAGAGGATTCCTCCTGC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGCAGGAGGAATCCTCTaGTTCAGTCCGAGTCATTTC +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGAGGIL*FSPSHF
Trigger: GAAATGACTCGGACTGAACAAGAGGATTCCTCCTGC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTCTCGCAATCTGTTCTaGCTGTTGGCGAGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCSRNLF*LLASKV
Trigger: GACCTTGCTCGCCAACAGCAAGAACAGATTGCGAGA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCTGCTGTTGCAGAAGTaGCTGCTGTTGTCTCGCAAT +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGLLLQK*LLLSRN
Trigger: ATTGCGAGACAACAGCAGCAACTTCTGCAACAGCAG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACTGCTGTTGCAGAAGTaGCTGCTGTTGTCTCGCAAT +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGLLLQK*LLLSRN
Trigger: ATTGCGAGACAACAGCAGCAACTTCTGCAACAGCAG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTGCAGGAGATTAATTTaGTGCTGCTGTTGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHCRRLI*CCCCRS
Trigger: ACTTCTGCAACAGCAGCACAAAATTAATCTCCTGCA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGAGTTGATGGCATCTTaGCTCCAGGTGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWELMAS*LQVTPA
Trigger: TGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGAGTTGATGGCATCTTaGCTCCAGGTGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCELMAS*LQVTPA
Trigger: TGCAGGTGTCACCTGGAGCAAAGATGCCATCAACTC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTTGGTGGCTGTGGAGTaGATGGCATCTTTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCLVAVE*MASLLQ
Trigger: CTGGAGCAAAGATGCCATCAACTCCACAGCCACCAA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCTAGGGATGCTGCTTTaGTTTGGCAGATTGACAGGG +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGLGMLL*FGRLTG
Trigger: CCCTGTCAATCTGCCAAACAAAAGCAGCATCCCTAG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAAAAGGGCAGGGGAGTaGAGACTAGATAGGATATCT +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGKRAGE*RLDRIS
Trigger: AGATATCCTATCTAGTCTCAACTCCCCTGCCCTTTT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGCGAGATCCTAAGATTTaGCTAATGTTGGAGTTATGC +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGRDPKI*LMLELC
Trigger: GCATAACTCCAACATTAGCAAAATCTTAGGATCTCG...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTTCTCTAAGTGGATCTaGCTTAGCCGGGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCFSKWI*LSRACS
Trigger: AGAGCAGGCCCGGCTAAGCAAGATCCACTTAGAGAA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTGGAATCTGAGGCTGTaGCCCCACAGTAAAGAACTG +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGWNLRL*PHSKEL
Trigger: CAGTTCTTTACTGTGGGGCAACAGCCTCAGATTCCA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTCTTCAAAGAAATCCTaGTGTGATAAGTGCAGTTCA +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARSSKKS*CDKCSS
Trigger: TGAACTGCACTTATCACACAAGGATTTCTTTGAAGA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTATAGCTTGTAATTTCTaGGCTAGACCTGTTTATTGC +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARIACNF*ARPVYC
Trigger: GCAATAAACAGGTCTAGCCAAGAAATTACAAGCTAT...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGGCGGTTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTTCATCAACTTTCAGTTaGGACCAACATCTATGGATA +
Preference number: 5 (lower is better)
Translates to: WRLLWCVYVIPHHALMARSSTFS*DQHLWI
Trigger: TATCCATAGATGTTGGTCCAAACTGAAAGTTGATGA...ACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAACCGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGTGCAAAATGAGTAAATaGAGAGAAGCAGCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQCKMSK*REAASA
Trigger: AGCTGAGGCTGCTTCTCTCAATTTACTCATTTTGCA...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCCTCTCCCTAATGAGTaGGTAGAGGTCAATTCTTTG +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGPLPNE*VEVNSL
Trigger: CAAAGAATTGACCTCTACCAACTCATTAGGGAGAGG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCACAAACTTTACACTTaGAAACAGCAGCCAGCATGT +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQHKLYT*KQQPAC
Trigger: ACATGCTGGCTGCTGTTTCAAAGTGTAAAGTTTGTG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGAGAGGTGGCTTGCTaGGAAGACATTCTTCCCATT +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGGEVAC*EDILPI
Trigger: AATGGGAAGAATGTCTTCCAAGCAAGCCACCTCTCC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527619.6
ENST00000655819.1
CDS CCA 90 bp TTCTTTCCTTTTCATTCCTGCAGCTGTTCAGCCCCATATTATTTATaGAGGACAGTTTCCCGTCAACACCATGTGGCTGTTGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: FFPFHSCSCSAPYYL*RTVSRQHHVAVAAV
Trigger: AACAGCAGCAACAGCCACATGGTGTTGACGGGAAACTGTCCTCCATAAATAATATGGGGCTGAACAGCTGCAGGAATGAAAAGGAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGTCCCAGTCAGCATCTaGTTGAATGGTACTGACAAG +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGVPVSI*LNGTDK
Trigger: CTTGTCAGTACCATTCAACAAGATGCTGACTGGGAC...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGTCCCAGTCAGCATCTaGTTGAATGGTACTGACAAG +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGVPVSI*LNGTDK
Trigger: CTTGTCAGTACCATTCAACAAGATGCTGACTGGGAC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAATCTGTTCTTGCTGTaGGCGAGCAAGGTCCATTTG +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGNLFLL*ASKVHL
Trigger: CAAATGGACCTTGCTCGCCAACAGCAAGAACAGATT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCTGCTGTTGCAGAAGTaGCTGCTGTTGTCTCGCAAT +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCLLLQK*LLLSRN
Trigger: ATTGCGAGACAACAGCAGCAACTTCTGCAACAGCAG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTGCAGGAGATTAATTTaGTGCTGCTGTTGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGCRRLI*CCCCRS
Trigger: ACTTCTGCAACAGCAGCACAAAATTAATCTCCTGCA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGTTTTCCATCTTCATTaGACTTTCCCGTTAACTGGG +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGVFHLH*TFPLTG
Trigger: CCCAGTTAACGGGAAAGTCAAATGAAGATGGAAAAC...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGCGAGATCCTAAGATTTaGCTAATGTTGGAGTTATGC +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQRDPKI*LMLELC
Trigger: GCATAACTCCAACATTAGCAAAATCTTAGGATCTCG...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATCGAGATCCTAAGATTTaGCTAATGTTGGAGTTATGC +
Preference number: 5 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHRDPKI*LMLELC
Trigger: GCATAACTCCAACATTAGCAAAATCTTAGGATCTCG...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGAATCTGAGGCTGTaGCCCCACAGTAAAGAACTG +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCWNLRL*PHSKEL
Trigger: CAGTTCTTTACTGTGGGGCAACAGCCTCAGATTCCA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGTTAAGATGCCAAAGATaGTCTAAGACTTTGCAGTGT +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGLRCQR*SKTLQC
Trigger: ACACTGCAAAGTCTTAGACAATCTTTGGCATCTTAA...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTGCACTGTGGCAACCTaGTTCATTCCTTACAATATC +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGCTVAT*FIPYNI
Trigger: GATATTGTAAGGAATGAACAAGGTTGCCACAGTGCA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGGGATAGCTTGTAATTTCTaGGCTAGACCTGTTTATTGC +
Preference number: 5 (lower is better)
Translates to: CGATNACGLFNNSLLGRGIACNF*ARPVYC
Trigger: GCAATAAACAGGTCTAGCCAAGAAATTACAAGCTAT...CCCCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp CCGCCCACCCTTACCTCTGCCCCAAAGGTACCAGCATTCCAAATATTTGTTCATTGGCATTCATGCTTCTaGCTATTAAATGGTCACAGA +
Preference number: 5 (lower is better)
Translates to: PPTLTSAPKVPAFQIFVHWHSCF*LLNGHR
Trigger: TCTGTGACCATTTAATAGCAAGAAGCATGAATGCCA...ATGAACAAATATTTGGAATGCTGGTACCTTTGGGGCAGAGGTAAGGGTGGGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TTGCTCTGGTGTGTGTATGTCATACCACATCACGCACTGATGGCACGTCAACAGAGAAACAGAACATCATaGGCAGGAATAACAGACAGA +
Preference number: 5 (lower is better)
Translates to: LLWCVYVIPHHALMARQQRNRTS*AGITDR
Trigger: TCTGTCTGTTATTCCTGCCAATGATGTTCTGTTTCT...CTGTTGACGTGCCATCAGTGCGTGATGTGGTATGACATACACACACCAGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTGGCCTCACTTTATGCTaGTGGTTCTTCAGGAATAAG +
Preference number: 5 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPGLTLC*WFFRNK
Trigger: CTTATTCCTGAAGAACCACAAGCATAAAGTGAGGCC...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTACAACAGAGTTGCAGTaGTCCCAACAGCCCTACACA +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCTTELQ*SQQPYT
Trigger: TGTGTAGGGCTGTTGGGACAACTGCAACTCTGTTGT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCCCAAAGATGGCATGTaGAACATATCAGGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPPKDGM*NISGKH
Trigger: GTGCTTTCCTGATATGTTCAACATGCCATCTTTGGG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACTGCAGAGCCATTCATaGCTTTACTTCCCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGLQSHS*LYFPLH
Trigger: ATGCAGAGGGAAGTAAAGCAATGAATGGCTCTGCAG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCAGTGGCACCTCCTGTaGGCCAACAATAATACTGCT +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWQWHLL*ANNNTA
Trigger: AGCAGTATTATTGTTGGCCAACAGGAGGTGCCACTG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGAGGTGGCTTGCTaGGAAGACATTCTTCCCATT +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWGEVAC*EDILPI
Trigger: AATGGGAAGAATGTCTTCCAAGCAAGCCACCTCTCC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655819.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAAATGGAGAGGTGGCTaGCTTGGAAGACATTCTTCC +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGKWRGG*LGRHSS
Trigger: GGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527619.6
ENST00000655819.1
CDS TCA 90 bp TTCAATCCGGCTTTCTCTTACCACATCAGCCAGAACTTCAGAACTTaGGGGCATAACACCTTTGACACCTTCCCAAATCACAAGAAACCT +
Preference number: 5 (lower is better)
Translates to: FNPAFSYHISQNFRT*GHNTFDTFPNHKKP
Trigger: AGGTTTCTTGTGATTTGGGAAGGTGTCAAAGGTGTTATGCCCTCAAGTTCTGAAGTTCTGGCTGATGTGGTAAGAGAAAGCCGGATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683767.1
CDS CCA 90 bp ATCATGTCAATCACACAGGCTTGTCTCTCAGCTAATCATGAAATATaGCCCTCAAACCATGAAGTAGATGTGAGGGAGAGGTGGGTAATG +
Preference number: 5 (lower is better)
Translates to: IMSITQACLSANHEI*PSNHEVDVRERWVM
Trigger: CATTACCCACCTCTCCCTCACATCTACTTCATGGTTTGAGGGCCATATTTCATGATTAGCTGAGAGACAAGCCTGTGTGATTGACATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAATGGAGAGGTGGCTaGCTTGGAAGACATTCTTCT +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGKWRGG*LGRHSS
Trigger: AGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000528252.5
ENST00000528429.5
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACCAGTCAGCATCTTGTaGAATGGTACTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGPVSIL*NGTDKC
Trigger: ACACTTGTCAGTACCATTCAACAAGATGCTGACTGG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGCCAGTCAGCATCTTGTaGAATGGTACTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGPVSIL*NGTDKC
Trigger: ACACTTGTCAGTACCATTCAACAAGATGCTGACTGG...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTAATCTGTTCTTGCTGTaGGCGAGCAAGGTCCATTTG +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCNLFLL*ASKVHL
Trigger: CAAATGGACCTTGCTCGCCAACAGCAAGAACAGATT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCAGAAGTTGCTGCTGTaGTCTCGCAATCTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWQKLLL*SRNLFL
Trigger: CAAGAACAGATTGCGAGACAACAGCAGCAACTTCTG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCTTTTGTTTGGCAGATaGACAGGGCTGGTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCLLFGR*TGLVLL
Trigger: CAGCAAAACCAGCCCTGTCAATCTGCCAAACAAAAG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGCGAGATCCTAAGATTTaGCTAATGTTGGAGTTATGC +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGRDPKI*LMLELC
Trigger: GCATAACTCCAACATTAGCAAAATCTTAGGATCTCG...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGTGGCATTCATGCTTCTaGCTATTAAATGGTCACAGA +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGWHSCF*LLNGHR
Trigger: TCTGTGACCATTTAATAGCAAGAAGCATGAATGCCA...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTGCAAAATGAGTAAATaGAGAGAAGCAGCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPCKMSK*REAASA
Trigger: AGCTGAGGCTGCTTCTCTCAATTTACTCATTTTGCA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAGGGAGAAACAGAACATCATaGGCAGGAATAACAGACAGA +
Preference number: 5 (lower is better)
Translates to: IVEPQMHAGSLITLCWGGRNRTS*AGITDR
Trigger: TCTGTCTGTTATTCCTGCCAATGATGTTCTGTTTCT...CCCTCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGCTAAGCATTCTAATTaGCTACAAGCTGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWAKHSN*LQAGGG
Trigger: CCCTCCTCCAGCTTGTAGCAAATTAGAATGCTTAGC...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTGCTAAGCATTCTAATTaGCTACAAGCTGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCAKHSN*LQAGGG
Trigger: CCCTCCTCCAGCTTGTAGCAAATTAGAATGCTTAGC...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTCACAAACTTTACACTTaGAAACAGCAGCCAGCATGT +
Preference number: 5 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPHKLYT*KQQPAC
Trigger: ACATGCTGGCTGCTGTTTCAAAGTGTAAAGTTTGTG...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCTGCAGAGCCATTCATaGCTTTACTTCCCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWLQSHS*LYFPLH
Trigger: ATGCAGAGGGAAGTAAAGCAATGAATGGCTCTGCAG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGACAACCTTTCATGTCCTaGAAGCTCACCATGACCTTT +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGQPFMS*KLTMTF
Trigger: AAAGGTCATGGTGAGCTTCAAGGACATGAAAGGTTG...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527619.6
ENST00000655819.1
CDS-3UTR CAA 90 bp ATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACCTTGACAGAGTGACAGTGGGCAGCTaGGCCTTGTTCCTGATCTTA +
Preference number: 5 (lower is better)
Translates to: ITSMPSKIEYLFLHNLDRVTVGS*ALFLIL
Trigger: TAAGATCAGGAACAAGGCCAAGCTGCCCACTGTCAC...TCTGTCAAGGTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGAAATGGAGAGGTGGCTaGCTTGGAAGACATTCTTCT +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWKWRGG*LGRHSS
Trigger: AGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTT...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316399.10
ENST00000528252.5
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCCAGTCAGCATCTTGTaGAATGGTACTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWPVSIL*NGTDKC
Trigger: ACACTTGTCAGTACCATTCAACAAGATGCTGACTGG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTGCAGGAGATTAATTTaGTGCTGCTGTTGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGCRRLI*CCCCRS
Trigger: ACTTCTGCAACAGCAGCACAAAATTAATCTCCTGCA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGAAAAGGGCAGGGGAGTaGAGACTAGATAGGATATCT +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWKRAGE*RLDRIS
Trigger: AGATATCCTATCTAGTCTCAACTCCCCTGCCCTTTT...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGGTTTTCCATCTTCATTaGACTTTCCCGTTAACTGGG +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGVFHLH*TFPLTG
Trigger: CCCAGTTAACGGGAAAGTCAAATGAAGATGGAAAAC...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAAGATTTTGCTAATGTaGGAGTTATGCATGTCGGGG +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGKILLM*ELCMSG
Trigger: CCCCGACATGCATAACTCCAACATTAGCAAAATCTT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAGATTTTGCTAATGTaGGAGTTATGCATGTCGGGG +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGKILLM*ELCMSG
Trigger: CCCCGACATGCATAACTCCAACATTAGCAAAATCTT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTGCACTGTGGCAACCTaGTTCATTCCTTACAATATC +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGCTVAT*FIPYNI
Trigger: GATATTGTAAGGAATGAACAAGGTTGCCACAGTGCA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTCCTCTCCCTAATGAGTaGGTAGAGGTCAATTCTTTG +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCPLPNE*VEVNSL
Trigger: CAAAGAATTGACCTCTACCAACTCATTAGGGAGAGG...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGATTTCTTTGCAGTTGTaGGCACTTGGTACAGGACTT +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGISLQL*ALGTGL
Trigger: AAGTCCTGTACCAAGTGCCAACAACTGCAAAGAAAT...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAATTTCTTTGCAGTTGTaGGCACTTGGTACAGGACTT +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGISLQL*ALGTGL
Trigger: AAGTCCTGTACCAAGTGCCAACAACTGCAAAGAAAT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGCCCAAAGATGGCATGTaGAACATATCAGGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWPKDGM*NISGKH
Trigger: GTGCTTTCCTGATATGTTCAACATGCCATCTTTGGG...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp TGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGTCTTCTTTCATGTCCTaGAAGCTCACCATGACCTTT +
Preference number: 5 (lower is better)
Translates to: CNCGATNACGLFNNSLLGSSFMS*KLTMTF
Trigger: AAAGGTCATGGTGAGCTTCAAGGACATGAAAGAAGA...CCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528429.5
CDS-3UTR CAA 90 bp AGACTTATAATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACATGGGAGGCCACATGTaGATCACTGCCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: RLIITSMPSKIEYLFLHNMGGHM*ITALFL
Trigger: AAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCAT...GTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTATTATAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CAA 90 bp CTTGGCCTTGTTCCTGATCTTAAGGGAAATTCCTGTAGCATTTCTTCATATGTAGTCCCAGTCAGCATCTaGTTGAATGGTACTGACAAG +
Preference number: 5 (lower is better)
Translates to: LGLVPDLKGNSCSISSYVVPVSI*LNGTDK
Trigger: CTTGTCAGTACCATTCAACAAGATGCTGACTGGGAC...TACATATGAAGAAATGCTACAGGAATTTCCCTTAAGATCAGGAACAAGGCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGAAGATTTTGCTAATGTaGGAGTTATGCATGTCGGGG +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWKILLM*ELCMSG
Trigger: CCCCGACATGCATAACTCCAACATTAGCAAAATCTT...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528252.5
ENST00000655819.1
CDS-3UTR CAA 90 bp ACAGTTAAATATTTGCACATTCCCCATACTCCAAGAGCACCAGCACTGAGGCCTTCATCAACTTTCAGTTaGGACCAACATCTATGGATA +
Preference number: 5 (lower is better)
Translates to: TVKYLHIPHTPRAPALRPSSTFS*DQHLWI
Trigger: TATCCATAGATGTTGGTCCAAACTGAAAGTTGATGA...AGGCCTCAGTGCTGGTGCTCTTGGAGTATGGGGAATGTGCAAATATTTAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTATTTCTTTGCAGTTGTaGGCACTTGGTACAGGACTT +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCISLQL*ALGTGL
Trigger: AAGTCCTGTACCAAGTGCCAACAACTGCAAAGAAAT...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAAGAAACAGAACATCATaGGCAGGAATAACAGACAGA +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGRNRTS*AGITDR
Trigger: TCTGTCTGTTATTCCTGCCAATGATGTTCTGTTTCT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp AGACTTATAATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACGTGGGCAGCTTGGCCTaGTTCCTGATCTTAAGGGAA +
Preference number: 5 (lower is better)
Translates to: RLIITSMPSKIEYLFLHNVGSLA*FLILRE
Trigger: TTCCCTTAAGATCAGGAACAAGGCCAAGCTGCCCAC...GTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTATTATAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CAA 90 bp CCCTCCAAAATAGAATACCTGTTTCTTCACAACCTTGACAGAAGAATGTGTTTCCCAGTCAGCATCTTGTaGAATGGTACTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: PSKIEYLFLHNLDRRMCFPVSIL*NGTDKC
Trigger: ACACTTGTCAGTACCATTCAACAAGATGCTGACTGG...GAAACACATTCTTCTGTCAAGGTTGTGAAGAAACAGGTATTCTATTTTGGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CAA 90 bp GTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGGGAATAGCTTGTAATTTCTaGGCTAGACCTGTTTATTGC +
Preference number: 5 (lower is better)
Translates to: VIVEPQMHAGSLITLCWGIACNF*ARPVYC
Trigger: GCAATAAACAGGTCTAGCCAAGAAATTACAAGCTAT...TCCCCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GATTACCCACTTCTAGCCAAGACGGAGGCTGAATTTACCCTCCTTCAGAAAAATATTTCCACATTCCCTTaGTTCCTCAGTATATATTGG +
Preference number: 5 (lower is better)
Translates to: DYPLLAKTEAEFTLLQKNISTFP*FLSIYW
Trigger: CCAATATATACTGAGGAACAAAGGGAATGTGGAAAT...ATTTTTCTGAAGGAGGGTAAATTCAGCCTCCGTCTTGGCTAGAAGTGGGTAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CAA 90 bp CCCTCCAAAATAGAATACCTGTTTCTTCACAACCTTGACAGAAGAATGTGTTTCAGAAAGACTTGCCTCTaGTTCAGTCCGAGTCATTTC +
Preference number: 5 (lower is better)
Translates to: PSKIEYLFLHNLDRRMCFRKTCL*FSPSHF
Trigger: GAAATGACTCGGACTGAACAAGAGGCAAGTCTTTCT...GAAACACATTCTTCTGTCAAGGTTGTGAAGAAACAGGTATTCTATTTTGGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CAA 90 bp TCCTTCAGAAAAATGTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTTGTTCTTTAATTTGCATTACTaGGATTACCCACTTCTAGCC +
Preference number: 5 (lower is better)
Translates to: SFRKMLNIVVTVGSLALFFNLHY*DYPLLA
Trigger: GGCTAGAAGTGGGTAATCCAAGTAATGCAAATTAAA...GAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAACATTTTTCTGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS-3UTR CAA 90 bp TCCTTCAGAAAAATGTTGAATATAGTGGTGACAGTGGGCAGCTTGGCCTTGTTCTGTTTCTTCACAACCTaGACAGAAGAATGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: SFRKMLNIVVTVGSLALFCFFTT*TEECVS
Trigger: TGAAACACATTCTTCTGTCAAGGTTGTGAAGAAACA...GAACAAGGCCAAGCTGCCCACTGTCACCACTATATTCAACATTTTTCTGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS TCA 90 bp TTGTCCAAAGTCACACAACCAGGAAATAATGCTGGCTACATTTATTaGGCACCTACTTTGAGCTGGCAATGTTCTAAATGCTTTAGTTGC +
Preference number: 5 (lower is better)
Translates to: LSKVTQPGNNAGYIY*APTLSWQCSKCFSC
Trigger: GCAACTAAAGCATTTAGAACATTGCCAGCTCAAAGTAGGTGCTCAATAAATGTAGCCAGCATTATTTCCTGGTTGTGTGACTTTGGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTTAAGATGCCAAAGATaGTCTAAGACTTTGCAGTGT +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCLRCQR*SKTLQC
Trigger: ACACTGCAAAGTCTTAGACAATCTTTGGCATCTTAA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GCTGATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTCTTCAAAGAAATCCTaGTGTGATAAGTGCAGTTCA +
Preference number: 5 (lower is better)
Translates to: ADVIVEPQMHAGSLITLCSSKKS*CDKCSS
Trigger: TGAACTGCACTTATCACACAAGGATTTCTTTGAAGA...ACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS-3UTR CAA 90 bp GATGTAATTGTGGAGCCACAAATGCATGCGGGCTCTTTAATAACTCTTTGTTGGTCTTCAAAGAAATCCTaGTGTGATAAGTGCAGTTCA +
Preference number: 5 (lower is better)
Translates to: DVIVEPQMHAGSLITLCWSSKKS*CDKCSS
Trigger: TGAACTGCACTTATCACACAAGGATTTCTTTGAAGA...CCAACAAAGAGTTATTAAAGAGCCCGCATGCATTTGTGGCTCCACAATTACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000655819.1
CDS TCA 90 bp GATAGCAGAAAGCACACAATTCCACTGGGCAAATACTCTAATTTCTaGCCAATGTATGTCCTATGGAATTGTATCAAAGCCTGCATACTT +
Preference number: 5 (lower is better)
Translates to: DSRKHTIPLGKYSNF*PMYVLWNCIKACIL
Trigger: AAGTATGCAGGCTTTGATACAATTCCATAGGACATACATTGGTCAGAAATTAGAGTATTTGCCCAGTGGAATTGTGTGCTTTCTGCTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS CCA 90 bp AGGAGATGGACCTGGAACTTTAAAGGATCAATGTCAGGCAAATATTaGTGGAGCTGTTATACCTCCTTAGACCTAGAATATAATTATTTG +
Preference number: 5 (lower is better)
Translates to: RRWTWNFKGSMSGKY*WSCYTSLDLEYNYL
Trigger: CAAATAATTATATTCTAGGTCTAAGGAGGTATAACAGCTCCACCAATATTTGCCTGACATTGATCCTTTAAAGTTCCAGGTCCATCTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS TCA 90 bp ATGTATCAAAGAAGTCACTCATATACTTTCAGTTTTAACAATGTTTaGAGCCCTCTAACTCTCCATTCCTCTTGTTCAGTCCGAGTCATT +
Preference number: 5 (lower is better)
Translates to: MYQRSHSYTFSFNNV*SPLTLHSSCSVRVI
Trigger: AATGACTCGGACTGAACAAGAGGAATGGAGAGTTAGAGGGCTTCAAACATTGTTAAAACTGAAAGTATATGAGTGACTTCTTTGATACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS CCA 90 bp AGATGGACCTGGAACTTTAAAGGATCAATGTCAGGCAAATATTGGTaGAGCTGTTATACCTCCTTAGACCTAGAATATAATTATTTGAGA +
Preference number: 5 (lower is better)
Translates to: RWTWNFKGSMSGKYW*SCYTSLDLEYNYLR
Trigger: TCTCAAATAATTATATTCTAGGTCTAAGGAGGTATAACAGCTCCACCAATATTTGCCTGACATTGATCCTTTAAAGTTCCAGGTCCATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS-3UTR CAA 90 bp AGACTTATAATAACTTCCATGCCCTCCAAAATAGAATACCTGTTTCTTCACAACTCCTTCAGAAAAATGTaGAATATAGTGGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: RLIITSMPSKIEYLFLHNSFRKM*NIVVTV
Trigger: CACTGTCACCACTATATTCAACATTTTTCTGAAGGA...GTTGTGAAGAAACAGGTATTCTATTTTGGAGGGCATGGAAGTTATTATAAGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530378.5
CDS CCA 72 bp CTCGCTCCGTCCCGGTTACCTGGGCGGGCTCCAGGATaGTACCGCGCGGGAGGGCTCCTTGTGCGCTGCGCC +
Preference number: 6 (lower is better)
Translates to: LAPSRLPGRAPG*YRAGGLLVRCA
Trigger: GGCGCAGCGCACAAGGAGCCCTCCCGCGCGGTACCATCCTGGAGCCCGCCCAGGTAACCGGGACGGAGCGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525835.5
CDS CCA 72 bp CTCGCTCTCGAGATCGCTCGCTCCGTCCCGGTTACCTaGGCGGGCTCCAGGATGGTACCGCGCGGGAGGGCT +
Preference number: 6 (lower is better)
Translates to: LALEIARSVPVT*AGSRMVPRGRA
Trigger: AGCCCTCCCGCGCGGTACCATCCTGGAGCCCGCCCAGGTAACCGGGACGGAGCGAGCGATCTCGAGAGCGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525835.5
CDS GCA 72 bp GCTGCTGGCACGGCCGCGGGCGTCCCTGTAGACTCGTaGTTCAGCCACAGTGGCACCTCCTGTTGGCCAACA +
Preference number: 6 (lower is better)
Translates to: AAGTAAGVPVDS*FSHSGTSCWPT
Trigger: TGTTGGCCAACAGGAGGTGCCACTGTGGCTGAAGCACGAGTCTACAGGGACGCCCGCGGCCGTGCCAGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527619.6
ENST00000527840.1
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS GCA 72 bp CCAGGATGGTACCGCGCGGGAGGGCTCCTTGTGCGCTaGGCCGCAGGAGTAAATGGCATTAAAGAAAAAGGG +
Preference number: 6 (lower is better)
Translates to: PGWYRAGGLLVR*AAGVNGIKEKG
Trigger: CCCTTTTTCTTTAATGCCATTTACTCCTGCGGCGCAGCGCACAAGGAGCCCTCCCGCGCGGTACCATCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525835.5
CDS GCA 72 bp GGGCAGGCTGCGGGAGAAAAGCTGTTTGTGTTAGCCTaGGAGTTACCCAGGGCTGCAGTGAGAGCAGAAGGG +
Preference number: 6 (lower is better)
Translates to: GQAAGEKLFVLA*ELPRAAVRAEG
Trigger: CCCTTCTGCTCTCACTGCAGCCCTGGGTAACTCGCAGGCTAACACAAACAGCTTTTCTCCCGCAGCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524520.5
ENST00000525259.1
ENST00000530378.5
CDS CCA 72 bp GGCAGCAGCAGCTGCTGCCAGAGTCCGCTGGTCATGTaGAAAAATTGGGATCATGAGCGGAGGCATGTGACC +
Preference number: 6 (lower is better)
Translates to: GSSSCCQSPLVM*KNWDHERRHVT
Trigger: GGTCACATGCCTCCGCTCATGATCCCAATTTTTCCACATGACCAGCGGACTCTGGCAGCAGCTGCTGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CCA 72 bp CAGGGCTGGTTTTGCTGGCTGGGAAGAGGTTCTGGGTaGGAGACGTTGGGGACTTTACAGGCTCTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: QGWFCWLGRGSG*ETLGTLQALLS
Trigger: AGACAGCAGAGCCTGTAAAGTCCCCAACGTCTCCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000524650.1
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CAA 90 bp AGGTTCTGGGTGGGAGACGTTGGGGACTTTACAGGCTCTGCTGTCTaGGGTCGGGATGAGAGATTCAGAGGCTGTGCTGCTGCTTCATCC +
Preference number: 6 (lower is better)
Translates to: RFWVGDVGDFTGSAV*GRDERFRGCAAASS
Trigger: GGATGAAGCAGCAGCACAGCCTCTGAATCTCTCATCCCGACCCAAGACAGCAGAGCCTGTAAAGTCCCCAACGTCTCCCACCCAGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000524650.1
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CAA 90 bp TATGGAGGACAGTTTCCCGTCAACACCATGTGGCTGTTGCTGCTGTaGCTCCCGCTGGATCTGCTCTCGCATCTTCCGCGCCTCCTGAAT +
Preference number: 6 (lower is better)
Translates to: YGGQFPVNTMWLLLL*LPLDLLSHLPRLLN
Trigger: ATTCAGGAGGCGCGGAAGATGCGAGAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTTGACGGGAAACTGTCCTCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS GCA 72 bp GGGGAAGAGGAATCCCTGTTGGGCAGCAGCAGCTGCTaGCAGAGTCCGCTGGTCATGTGGAAAAATTGGGAT +
Preference number: 6 (lower is better)
Translates to: GEEESLLGSSSC*QSPLVMWKNWD
Trigger: ATCCCAATTTTTCCACATGACCAGCGGACTCTGGCAGCAGCTGCTGCTGCCCAACAGGGATTCCTCTTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS GCA 72 bp GAGGACAGTTTCCCGTCAACACCATGTGGCTGTTGCTaGTGTTGCTCCCGCTGGATCTGCTCTCGCATCTTC +
Preference number: 6 (lower is better)
Translates to: EDSFPSTPCGCC*CCSRWICSRIF
Trigger: GAAGATGCGAGAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTTGACGGGAAACTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS GCA 72 bp ATGGAGGACAGTTTCCCGTCAACACCATGTGGCTGTTaGTGCTGTTGCTCCCGCTGGATCTGCTCTCGCATC +
Preference number: 6 (lower is better)
Translates to: MEDSFPSTPCGC*CCCSRWICSRI
Trigger: GATGCGAGAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTTGACGGGAAACTGTCCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CCA 72 bp TTGACAGGGCTGGTTTTGCTGGCTGGGAAGAGGTTCTaGGTGGGAGACGTTGGGGACTTTACAGGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: LTGLVLLAGKRF*VGDVGDFTGSA
Trigger: AGCAGAGCCTGTAAAGTCCCCAACGTCTCCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000524650.1
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CCA 72 bp TTGATGGCATCTTTGCTCCAGGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGAGCTGCTGGAGCTGTA +
Preference number: 6 (lower is better)
Translates to: LMASLLQVTPAC*PAERHRAAGAV
Trigger: TACAGCTCCAGCAGCTCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTGGAGCAAAGATGCCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000524650.1
ENST00000527619.6
ENST00000528252.5
ENST00000655819.1
CDS CAA 90 bp GGGCTAGGGATGCTGCTTTTGTTTGGCAGATTGACAGGGCTGGTTTaGCTGGCTGGGAAGAGGTTCTGGGTGGGAGACGTTGGGGACTTT +
Preference number: 6 (lower is better)
Translates to: GLGMLLLFGRLTGLV*LAGKRFWVGDVGDF
Trigger: AAAGTCCCCAACGTCTCCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTGTCAATCTGCCAAACAAAAGCAGCATCCCTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000524650.1
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS TCA 72 bp GGGCTGGCCGAGGTGCTAGAGCAGTCAGATGTCATCTaGGGCGATGGTGTGGTAGTTGCCATAGTGATAGCA +
Preference number: 6 (lower is better)
Translates to: GLAEVLEQSDVI*GDGVVVAIVIA
Trigger: TGCTATCACTATGGCAACTACCACACCATCGCCTCAGATGACATCTGACTGCTCTAGCACCTCGGCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CCA 72 bp AGCTGCTGCCAGAGTCCGCTGGTCATGTGGAAAAATTaGGATCATGAGCGGAGGCATGTGACCCTGAACCTG +
Preference number: 6 (lower is better)
Translates to: SCCQSPLVMWKN*DHERRHVTLNL
Trigger: CAGGTTCAGGGTCACATGCCTCCGCTCATGATCCCAATTTTTCCACATGACCAGCGGACTCTGGCAGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CAA 72 bp TATGGAGGACAGTTTCCCGTCAACACCATGTGGCTGTaGCTGCTGTTGCTCCCGCTGGATCTGCTCTCGCAT +
Preference number: 6 (lower is better)
Translates to: YGGQFPVNTMWL*LLLLPLDLLSH
Trigger: ATGCGAGAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTTGACGGGAAACTGTCCTCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS TCA 72 bp TGGGGACTTTACAGGCTCTGCTGTCTTGGGTCGGGATaGGAGATTCAGAGGCTGTGCTGCTGCTTCATCCTT +
Preference number: 6 (lower is better)
Translates to: WGLYRLCCLGSG*EIQRLCCCFIL
Trigger: AAGGATGAAGCAGCAGCACAGCCTCTGAATCTCTCATCCCGACCCAAGACAGCAGAGCCTGTAAAGTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000524650.1
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CCA 72 bp TTGATGGCATCTTTGCTCCAGGTGACACCTGCATGCTaGCCAGCTGAGCGGCATAGAGCTGCTCAATCTGTT +
Preference number: 6 (lower is better)
Translates to: LMASLLQVTPAC*PAERHRAAQSV
Trigger: AACAGATTGAGCAGCTCTATGCCGCTCAGCTGGCCAGCATGCAGGTGTCACCTGGAGCAAAGATGCCATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000528429.5
ENST00000683767.1
CDS CCA 72 bp GCTGGATCTGCTCTCGCATCTTCCGCGCCTCCTGAATaGCTTTCATCACTGTATCCTGATCCCCAAAAAGGG +
Preference number: 6 (lower is better)
Translates to: AGSALASSAPPE*LSSLYPDPQKG
Trigger: CCCTTTTTGGGGATCAGGATACAGTGATGAAAGCCATTCAGGAGGCGCGGAAGATGCGAGAGCAGATCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CAA 72 bp TGTTTCAGTGTGTCCACCACATCGGCAAGACTCCCTTaGCGGCGCTCTGGGGTTCCAAAAGTAACACTGGTC +
Preference number: 6 (lower is better)
Translates to: CFSVSTTSARLP*RRSGVPKVTLV
Trigger: GACCAGTGTTACTTTTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGATGTGGTGGACACACTGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000526673.1
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000530378.5
ENST00000533411.5
ENST00000533658.5
ENST00000533870.1
ENST00000655819.1
ENST00000683767.1
CDS CAA 90 bp CATATTATTTATGGAGGACAGTTTCCCGTCAACACCATGTGGCTGTaGCTGCTGTTGCTCCCGCTGGATCTGCTCTCGCATCTTCCGCGC +
Preference number: 6 (lower is better)
Translates to: HIIYGGQFPVNTMWL*LLLLPLDLLSHLPR
Trigger: GCGCGGAAGATGCGAGAGCAGATCCAGCGGGAGCAACAGCAGCAACAGCCACATGGTGTTGACGGGAAACTGTCCTCCATAAATAATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS TCA 72 bp CCAGAGTCCGCTGGTCATGTGGAAAAATTGGGATCATaGGCGGAGGCATGTGACCCTGAACCTGGATCTGTT +
Preference number: 6 (lower is better)
Translates to: PESAGHVEKLGS*AEACDPEPGSV
Trigger: AACAGATCCAGGTTCAGGGTCACATGCCTCCGCTCATGATCCCAATTTTTCCACATGACCAGCGGACTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS GCA 72 bp CAGTCTGCGTACACCTTCACCGCGTCTCATTACATCTaGCAGCCTCTCTCTCCCTCTCTCTTTCATTTCCAC +
Preference number: 6 (lower is better)
Translates to: QSAYTFTASHYI*QPLSPSLFHFH
Trigger: GTGGAAATGAAAGAGAGAGGGAGAGAGAGGCTGGCAGATGTAATGAGACGCGGTGAAGGTGTACGCAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524520.5
ENST00000525259.1
ENST00000530378.5
CDS CCA 72 bp TGCGCTGCCAGTAGCTGCTCCCGTAAACTGATCAGCTaGGTAATCATGGTGGAGAGCTGCCGTTCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: CAASSCSRKLIS*VIMVESCRSFS
Trigger: AGAAAAAGAACGGCAGCTCTCCACCATGATTACCCAGCTGATCAGTTTACGGGAGCAGCTACTGGCAGCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000531297.1
ENST00000655819.1
ENST00000683767.1
CDS CAA 72 bp ATGCTGCTTTTGTTTGGCAGATTGACAGGGCTGGTTTaGCTGGCTGGGAAGAGGTTCTGGGTGGGAGACGTT +
Preference number: 6 (lower is better)
Translates to: MLLLFGRLTGLV*LAGKRFWVGDV
Trigger: AACGTCTCCCACCCAGAACCTCTTCCCAGCCAGCAAAACCAGCCCTGTCAATCTGCCAAACAAAAGCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000524650.1
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CAA 90 bp GCAGATGGGAGGCCACATGTTGATCACTGCCCTCTTCCTTTTCCCTaGAGGTTAAATCCTGGGTCATTGCATCCTCTCCATCAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: ADGRPHVDHCPLPFP*RLNPGSLHPLHQLH
Trigger: GTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000526673.1
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000529469.1
ENST00000530378.5
ENST00000533411.5
ENST00000533658.5
ENST00000533870.1
ENST00000655819.1
ENST00000683767.1
CDS CCA 72 bp TCACTGCCCTCTTCCTTTTCCCTTGAGGTTAAATCCTaGGTCATTGCATCCTCTCCATCAGCTGCACAGGCA +
Preference number: 6 (lower is better)
Translates to: SLPSSFSLEVKS*VIASSPSAAQA
Trigger: TGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000526673.1
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000529469.1
ENST00000530378.5
ENST00000533411.5
ENST00000533658.5
ENST00000533870.1
ENST00000655819.1
ENST00000683767.1
CDS CCA 72 bp CGAGGTGCTAGAGCAGTCAGATGTCATCTGAGGCGATaGTGTGGTAGTTGCCATAGTGATAGCACCAGGATA +
Preference number: 6 (lower is better)
Translates to: RGARAVRCHLRR*CGSCHSDSTRI
Trigger: TATCCTGGTGCTATCACTATGGCAACTACCACACCATCGCCTCAGATGACATCTGACTGCTCTAGCACCTCG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CCA 72 bp AGAGCCATTCATTGCTTTACTTCCCTCTGCATCTTCTaGCCGAGTAAGGTCGATGACACCTGGGCCCAGTTT +
Preference number: 6 (lower is better)
Translates to: RAIHCFTSLCIF*PSKVDDTWAQF
Trigger: AAACTGGGCCCAGGTGTCATCGACCTTACTCGGCCAGAAGATGCAGAGGGAAGTAAAGCAATGAATGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000527619.6
ENST00000527840.1
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS GCA 72 bp GCAGTCAGATGTCATCTGAGGCGATGGTGTGGTAGTTaGCATAGTGATAGCACCAGGATACACAACACCTGT +
Preference number: 6 (lower is better)
Translates to: AVRCHLRRWCGS*HSDSTRIHNTC
Trigger: ACAGGTGTTGTGTATCCTGGTGCTATCACTATGGCAACTACCACACCATCGCCTCAGATGACATCTGACTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS GCA 72 bp TCTCCATCAGCTGCACAGGCAAATGGAGAGGTGGCTTaGTTGGAAGACATTCTTATGAAGTGGCTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: SPSAAQANGEVA*LEDILMKWLLF
Trigger: GAAGAGCAGCCACTTCATAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683767.1
CDS TCA 72 bp GAACGCTGTCCCAGTCAGCATCTTGTTGAATGGTACTaGCAAGTGTTGGTAGCTCCTCAGAGTGAGGTTTGT +
Preference number: 6 (lower is better)
Translates to: ERCPSQHLVEWY*QVLVAPQSEVC
Trigger: ACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000526673.1
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000529469.1
ENST00000530378.5
ENST00000533411.5
ENST00000533658.5
ENST00000533870.1
ENST00000655819.1
ENST00000683767.1
CDS TCA 72 bp CAAAGCGCGTTCTTTCCTGTAGGGAAAGGAAAGCTGTaGCAGGGAACCTGCCAGAGCTTCTATGCATATCTT +
Preference number: 6 (lower is better)
Translates to: QSAFFPVGKGKL*QGTCQSFYAYL
Trigger: AAGATATGCATAGAAGCTCTGGCAGGTTCCCTGTCACAGCTTTCCTTTCCCTACAGGAAAGAACGCGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527840.1
CDS GCA 72 bp CCTGGCATTGTTACAGGCACAAGAGACAGACTAGTGTaGAAGATAAAGATGCTGCCATTATGGGGCTTGCTC +
Preference number: 6 (lower is better)
Translates to: PGIVTGTRDRLV*KIKMLPLWGLL
Trigger: GAGCAAGCCCCATAATGGCAGCATCTTTATCTTGCACACTAGTCTGTCTCTTGTGCCTGTAACAATGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529469.1
CDS CAA 72 bp AGGCCACATGTTGATCACTGCCCTCTTCCTTTTCCCTaGAGGTTAAATCCTGGGTCATTGCATCCTCTCCAT +
Preference number: 6 (lower is better)
Translates to: RPHVDHCPLPFP*RLNPGSLHPLH
Trigger: ATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000526673.1
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000529469.1
ENST00000530378.5
ENST00000533411.5
ENST00000533658.5
ENST00000533870.1
ENST00000655819.1
ENST00000683767.1
CDS CCA 72 bp CCCAGTTTTCCATCTTCATTTGACTTTCCCGTTAACTaGGGCCCCAAATTCTCAAAGCGCGTTCTTTCCTGT +
Preference number: 6 (lower is better)
Translates to: PSFPSSFDFPVN*GPKFSKRVLSC
Trigger: ACAGGAAAGAACGCGCTTTGAGAATTTGGGGCCCCAGTTAACGGGAAAGTCAAATGAAGATGGAAAACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527840.1
CDS CAA 72 bp AAACAGAGCCCAACAGTGAAGTCCACACATACCCTCTaGTTCAGTCCGAGTCATTTCCTCAAGCTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: KQSPTVKSTHTL*FSPSHFLKLLL
Trigger: CAGAAGAAGCTTGAGGAAATGACTCGGACTGAACAAGAGGGTATGTGTGGACTTCACTGTTGGGCTCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533658.5
CDS CAA 90 bp CCCATAAGTCTCAGTTTCAGAGGGGGCACTTCAGATGTAGCACCCTaGTTCAACAATGTTTTACAATCTGGTCAAATCACTGCTCAGGAG +
Preference number: 6 (lower is better)
Translates to: PISLSFRGGTSDVAP*FNNVLQSGQITAQE
Trigger: CTCCTGAGCAGTGATTTGACCAGATTGTAAAACATTGTTGAACAAGGGTGCTACATCTGAAGTGCCCCCTCTGAAACTGAGACTTATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS TCA 72 bp CTGCCTTCGTTCAGCAGACCCTCATTATCTCTAGCTTaGAACAATTTCCTTAATGTCTCTCCCTGCTCCCAT +
Preference number: 6 (lower is better)
Translates to: LPSFSRPSLSLA*NNFLNVSPCSH
Trigger: ATGGGAGCAGGGAGAGACATTAAGGAAATTGTTTCAAGCTAGAGATAATGAGGGTCTGCTGAACGAAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS TCA 72 bp GCTTTCTCTTACCACATCAGCCAGAACTTCAGAACTTaGGGGCATAACACCTTTGACACCTTCCCAAATCAC +
Preference number: 6 (lower is better)
Translates to: AFSYHISQNFRT*GHNTFDTFPNH
Trigger: GTGATTTGGGAAGGTGTCAAAGGTGTTATGCCCTCAAGTTCTGAAGTTCTGGCTGATGTGGTAAGAGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683767.1
CDS CCA 72 bp TTTCATTCCTGCAGCTGTTCAGCCCCATATTATTTATaGAGGACAGTTTCCCGTCAACACCATGTGGCTGTT +
Preference number: 6 (lower is better)
Translates to: FHSCSCSAPYYL*RTVSRQHHVAV
Trigger: AACAGCCACATGGTGTTGACGGGAAACTGTCCTCCATAAATAATATGGGGCTGAACAGCTGCAGGAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CCA 72 bp CCCAGTTTTCCATCTTCATTTGACTTTCCCGTTAACTaGGGCCCCAAATTCTCAAAGCGCGTTCTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: PSFPSSFDFPVN*GPKFSKRVLSF
Trigger: AAAGGAAAGAACGCGCTTTGAGAATTTGGGGCCCCAGTTAACGGGAAAGTCAAATGAAGATGGAAAACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CCA 72 bp TGGCCCTCAAACCATGAAGTAGATGTGAGGGAGAGGTaGGTAATGCATTTGAAGACTTTTAGGTGTCCAATG +
Preference number: 6 (lower is better)
Translates to: WPSNHEVDVRER*VMHLKTFRCPM
Trigger: CATTGGACACCTAAAAGTCTTCAAATGCATTACCCACCTCTCCCTCACATCTACTTCATGGTTTGAGGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS CCA 72 bp ATCACACAGGCTTGTCTCTCAGCTAATCATGAAATATaGCCCTCAAACCATGAAGTAGATGTGAGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: ITQACLSANHEI*PSNHEVDVRER
Trigger: CCTCTCCCTCACATCTACTTCATGGTTTGAGGGCCATATTTCATGATTAGCTGAGAGACAAGCCTGTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS CAA 72 bp CTGCAGGAGATTAATTTTGTGCTGCTGTTGCAGAAGTaGCTGCTGTTGTCTCGCAATCTGTTCTTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: LQEINFVLLLQK*LLLSRNLFLLL
Trigger: CAACAGCAAGAACAGATTGCGAGACAACAGCAGCAACTTCTGCAACAGCAGCACAAAATTAATCTCCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316399.10
ENST00000396356.7
ENST00000527619.6
ENST00000528252.5
ENST00000528429.5
ENST00000655819.1
ENST00000683767.1
CDS CAA 72 bp TACAAGCTAGTCAAGCCATCATCCAATAGAGCCTATTaGCTGAGCAACAGTGGAGCTTTGTGGTTTGCCTCA +
Preference number: 6 (lower is better)
Translates to: YKLVKPSSNRAY*LSNSGALWFAS
Trigger: TGAGGCAAACCACAAAGCTCCACTGTTGCTCAGCAAATAGGCTCTATTGGATGATGGCTTGACTAGCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683767.1
CDS CAA 90 bp GCTTGGAAGACATTCTTCTCGACTTCAGGAATTAACTTCTTGCCTTaGTCCTTTGGTGGCCACGATATCTTCATTGGAAGCGTCTATTGC +
Preference number: 6 (lower is better)
Translates to: AWKTFFSTSGINFLP*SFGGHDIFIGSVYC
Trigger: GCAATAGACGCTTCCAATGAAGATATCGTGGCCACCAAAGGACAAAGGCAAGAAGTTAATTCCTGAAGTCGAGAAGAATGTCTTCCAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526673.1
CDS CAA 90 bp AGCAAACTTTACAAGCTAGTCAAGCCATCATCCAATAGAGCCTATTaGCTGAGCAACAGTGGAGCTTTGTGGTTTGCCTCACAGTTGACA +
Preference number: 6 (lower is better)
Translates to: SKLYKLVKPSSNRAY*LSNSGALWFASQLT
Trigger: TGTCAACTGTGAGGCAAACCACAAAGCTCCACTGTTGCTCAGCAAATAGGCTCTATTGGATGATGGCTTGACTAGCTTGTAAAGTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683767.1
CDS CAA 72 bp TCTCGACTTCAGGAATTAACTTCTTGCCTTTGTCCTTaGGTGGCCACGATATCTTCATTGGAAGCGTCTATT +
Preference number: 6 (lower is better)
Translates to: SRLQELTSCLCP*VATISSLEASI
Trigger: AATAGACGCTTCCAATGAAGATATCGTGGCCACCAAAGGACAAAGGCAAGAAGTTAATTCCTGAAGTCGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526673.1
CDS CAA 72 bp TTGTTTTCTAGGATGTACACGAACCTGAGTGAACTCTaGTACAGAGTAGAGAAGGTAGATGTGGGATGTTGC +
Preference number: 6 (lower is better)
Translates to: LFSRMYTNLSEL*YRVEKVDVGCC
Trigger: GCAACATCCCACATCTACCTTCTCTACTCTGTACAAGAGTTCACTCAGGTTCGTGTACATCCTAGAAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS CAA 72 bp CTCAGTTTCAGAGGGGGCACTTCAGATGTAGCACCCTaGTTCAACAATGTTTTACAATCTGGTCAAATCACT +
Preference number: 6 (lower is better)
Translates to: LSFRGGTSDVAP*FNNVLQSGQIT
Trigger: AGTGATTTGACCAGATTGTAAAACATTGTTGAACAAGGGTGCTACATCTGAAGTGCCCCCTCTGAAACTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS CAA 90 bp AGACATTCTTCTCGACTTCAGGAATTAACTTCTTGCCTTTGTCCTTaGGTGGCCACGATATCTTCATTGGAAGCGTCTATTGCTGTCATT +
Preference number: 6 (lower is better)
Translates to: RHSSRLQELTSCLCP*VATISSLEASIAVI
Trigger: AATGACAGCAATAGACGCTTCCAATGAAGATATCGTGGCCACCAAAGGACAAAGGCAAGAAGTTAATTCCTGAAGTCGAGAAGAATGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526673.1
CDS TCA 72 bp CCCCTCATTCCAGCCATGATAAACGAACATATGCCATaGCCTTTGATGTCTCCATACTTTTGCTCATGTTTT +
Preference number: 6 (lower is better)
Translates to: PLIPAMINEHMP*PLMSPYFCSCF
Trigger: AAAACATGAGCAAAAGTATGGAGACATCAAAGGTCATGGCATATGTTCGTTTATCATGGCTGGAATGAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529469.1
CDS TCA 72 bp GAAGCTAGACAGTATAAACCCAATCCCTCCTCCATGTaGCTTGAATCTTTAAAGACACCATCATGTCATCCT +
Preference number: 6 (lower is better)
Translates to: EARQYKPNPSSM*LESLKTPSCHP
Trigger: AGGATGACATGATGGTGTCTTTAAAGATTCAAGTCACATGGAGGAGGGATTGGGTTTATACTGTCTAGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS CAA 90 bp TTCTTTCATTTGTTTTCTAGGATGTACACGAACCTGAGTGAACTCTaGTACAGAGTAGAGAAGGTAGATGTGGGATGTTGCAAGAGATGT +
Preference number: 6 (lower is better)
Translates to: FFHLFSRMYTNLSEL*YRVEKVDVGCCKRC
Trigger: ACATCTCTTGCAACATCCCACATCTACCTTCTCTACTCTGTACAAGAGTTCACTCAGGTTCGTGTACATCCTAGAAAACAAATGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS CAA 72 bp TACTATTGTTACATGAGACAACAACCTTTCATGTCCTaGAAGCTCACCATGACCTTTCATCTTTCCTATCCC +
Preference number: 6 (lower is better)
Translates to: YYCYMRQQPFMS*KLTMTFHLSYP
Trigger: GGGATAGGAAAGATGAAAGGTCATGGTGAGCTTCAAGGACATGAAAGGTTGTTGTCTCATGTAACAATAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527619.6
ENST00000655819.1
CDS CAA 90 bp AAAACAATCTACTATTGTTACATGAGACAACAACCTTTCATGTCCTaGAAGCTCACCATGACCTTTCATCTTTCCTATCCCCAATGGTCT +
Preference number: 6 (lower is better)
Translates to: KTIYYCYMRQQPFMS*KLTMTFHLSYPQWS
Trigger: AGACCATTGGGGATAGGAAAGATGAAAGGTCATGGTGAGCTTCAAGGACATGAAAGGTTGTTGTCTCATGTAACAATAGTAGATTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655819.1
CDS CCA 72 bp ACCTGGAACTTTAAAGGATCAATGTCAGGCAAATATTaGTGGAGCTGTTATACCTCCTTAGACCTAGAATAT +
Preference number: 6 (lower is better)
Translates to: TWNFKGSMSGKY*WSCYTSLDLEY
Trigger: ATATTCTAGGTCTAAGGAGGTATAACAGCTCCACCAATATTTGCCTGACATTGATCCTTTAAAGTTCCAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS TCA 72 bp CTATTTGCCCAGAGTTTAAAAATTCTGAGCACTCTTTaGACCATTCTTCTGTCTTGGTCTCTACACTTAAAC +
Preference number: 6 (lower is better)
Translates to: LFAQSLKILSTL*TILLSWSLHLN
Trigger: GTTTAAGTGTAGAGACCAAGACAGAAGAATGGTTCAAAGAGTGCTCAGAATTTTTAAACTCTGGGCAAATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS CCA 72 bp TGGAACTTTAAAGGATCAATGTCAGGCAAATATTGGTaGAGCTGTTATACCTCCTTAGACCTAGAATATAAT +
Preference number: 6 (lower is better)
Translates to: WNFKGSMSGKYW*SCYTSLDLEYN
Trigger: ATTATATTCTAGGTCTAAGGAGGTATAACAGCTCCACCAATATTTGCCTGACATTGATCCTTTAAAGTTCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS TCA 72 bp TATAATTTCATCTCTGCGATTATACCAATTGTTCTCTaGGAATATCCCAATGCCTTTGAGTTCCTCTTAAAG +
Preference number: 6 (lower is better)
Translates to: YNFISAIIPIVL*EYPNAFEFLLK
Trigger: CTTTAAGAGGAACTCAAAGGCATTGGGATATTCTCAGAGAACAATTGGTATAATCGCAGAGATGAAATTATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS CCA 72 bp GAATTTTCTTCAGTAATTACTTGTGCAGCTGGGATTTaGGTCACAACTTCTGAACTTGATAATAAGATCTAT +
Preference number: 6 (lower is better)
Translates to: EFSSVITCAAGI*VTTSELDNKIY
Trigger: ATAGATCTTATTATCAAGTTCAGAAGTTGTGACCCAAATCCCAGCTGCACAAGTAATTACTGAAGAAAATTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS CCA 72 bp AAACACTGGACAATTTGGTTGATCAAAGCATCTGCCTaGAGAGTTTTTGTTTCATCATGCAAATATAGTTTT +
Preference number: 6 (lower is better)
Translates to: KHWTIWLIKASA*RVFVSSCKYSF
Trigger: AAAACTATATTTGCATGATGAAACAAAAACTCTCCAGGCAGATGCTTTGATCAACCAAATTGTCCAGTGTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533870.1
CDS CAA 72 bp TCTTCTTATATAATTTCATCTCTGCGATTATACCAATaGTTCTCTGAGAATATCCCAATGCCTTTGAGTTCC +
Preference number: 6 (lower is better)
Translates to: SSYIISSLRLYQ*FSENIPMPLSS
Trigger: GGAACTCAAAGGCATTGGGATATTCTCAGAGAACAATTGGTATAATCGCAGAGATGAAATTATATAAGAAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533870.1