RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SOX5 (Homo sapiens)

Ensembl gene IDs: ENSG00000134532

Ensembl transcript IDs: ENST00000367206.7, ENST00000381381.6, ENST00000429944.6, ENST00000441133.2, ENST00000446891.7, ENST00000451604.7, ENST00000456299.2, ENST00000535530.5, ENST00000536629.5, ENST00000536729.2, ENST00000536850.1, ENST00000536911.1, ENST00000537393.5, ENST00000538083.1, ENST00000538905.1, ENST00000541847.5, ENST00000542241.5, ENST00000545921.5, ENST00000646273.1, ENST00000659413.1

Found 587 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACAACTATAAAAACCAGAATTCTGGCAAGATTATTTCTCAGTGTTaGGGCAAGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGCG +
Preference number: 1 (lower is better)
Translates to: NNYKNQNSGKIISQC*GKCVCVCVCARARA
Trigger: CGCGCGCGCGCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAATAATCTTGCCAGAATTCTGGTTTTTATAGTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR TCA 90 bp GCAAATACTCTGCTTGAACCAAAGTTGGACTTCAGTGGATTAATCTaGCAGCAAGGGAAGAGCAGTGGCAAGGATCCCTGGGTGCAGCCA +
Preference number: 1 (lower is better)
Translates to: ANTLLEPKLDFSGLI*QQGKSSGKDPWVQP
Trigger: TGGCTGCACCCAGGGATCCTTGCCACTGCTCTTCCCTTGCTGTCAGATTAATCCACTGAAGTCCAACTTTGGTTCAAGCAGAGTATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR TCA 90 bp GCCTGGCTAAACCAACAGCTATGCCCTACAAGACAAAGGGATACCTaGACCACTTTAAGTGGCCTTCATAGTTTTCCTTGCAGACCCCGT +
Preference number: 1 (lower is better)
Translates to: AWLNQQLCPTRQRDT*TTLSGLHSFPCRPR
Trigger: ACGGGGTCTGCAAGGAAAACTATGAAGGCCACTTAAAGTGGTTCAGGTATCCCTTTGTCTTGTAGGGCATAGCTGTTGGTTTAGCCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR CCA 90 bp AAGTCAAGGTCAAGATTATTTCTAGACCAGTCACTTGGGAGGATGTaGGATTTCATCCCCAGATGTGGGTTTAACTCACAATGGTCCAAC +
Preference number: 1 (lower is better)
Translates to: KSRSRLFLDQSLGRM*DFIPRCGFNSQWSN
Trigger: GTTGGACCATTGTGAGTTAAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAATCTTGACCTTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR TCA 90 bp GCAGTCCCATCACATTCAGTTGTTGCTCTTTGCAAATACTCTGCTTaGACCAAAGTTGGACTTCAGTGGATTAATCTGACAGCAAGGGAA +
Preference number: 1 (lower is better)
Translates to: AVPSHSVVALCKYSA*TKVGLQWINLTARE
Trigger: TTCCCTTGCTGTCAGATTAATCCACTGAAGTCCAACTTTGGTTCAAGCAGAGTATTTGCAAAGAGCAACAACTGAATGTGATGGGACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR TCA 90 bp TCCAGTGAATTAACCGTCAGAACAAGAGAACAGAATGCAGCGGTATaGACTTGCTTTTTGTTTCGGTTCATGCACAGTTTAGTCTCGGAC +
Preference number: 1 (lower is better)
Translates to: SSELTVRTREQNAAV*TCFLFRFMHSLVSD
Trigger: GTCCGAGACTAAACTGTGCATGAACCGAAACAAAAAGCAAGTTCATACCGCTGCATTCTGTTCTCTTGTTCTGACGGTTAATTCACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR CCA 90 bp TTTGCATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTaGCAAAATCTACATAAGCAGTCCCATCACATTCAGTTGTTGCTC +
Preference number: 1 (lower is better)
Translates to: FAFICTGPTTALAFG*QNLHKQSHHIQLLL
Trigger: GAGCAACAACTGAATGTGATGGGACTGCTTATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR GCA 90 bp TTGGCTGGCAAAATCTACATAAGCAGTCCCATCACATTCAGTTGTTaGTCTTTGCAAATACTCTGCTTGAACCAAAGTTGGACTTCAGTG +
Preference number: 1 (lower is better)
Translates to: LAGKIYISSPITFSC*SLQILCLNQSWTSV
Trigger: CACTGAAGTCCAACTTTGGTTCAAGCAGAGTATTTGCAAAGAGCAACAACTGAATGTGATGGGACTGCTTATGTAGATTTTGCCAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR CCA 90 bp CTTGAAATGATTTTGCATTTATTTGTACAGGCCCTACAACTGCCTTaGCATTTGGCTGGCAAAATCTACATAAGCAGTCCCATCACATTC +
Preference number: 1 (lower is better)
Translates to: LEMILHLFVQALQLP*HLAGKIYISSPITF
Trigger: GAATGTGATGGGACTGCTTATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATGCAAAATCATTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR CCA 90 bp GGGAGGATGTGGGATTTCATCCCCAGATGTGGGTTTAACTCACAATaGTCCAACGTTATTCCTATTATTAGTACCATAATCACATACATA +
Preference number: 1 (lower is better)
Translates to: GRMWDFIPRCGFNSQ*SNVIPIISTIITYI
Trigger: TATGTATGTGATTATGGTACTAATAATAGGAATAACGTTGGACCATTGTGAGTTAAACCCACATCTGGGGATGAAATCCCACATCCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR CCA 90 bp ATCGGTAAGTGTGTTAGAATTGATTTCAGCCATGAATGCCTTCAATaGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAAC +
Preference number: 1 (lower is better)
Translates to: IGKCVRIDFSHECLQ*HLPGAKTKYSCSPN
Trigger: GTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACACTTACCGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR CCA 90 bp TTAAAGTATTATAATGGCCTTGTAACTGAACTTCCTGCCCCCAGCTaGAAACTCACTTTACTTGTTGAAGCCCACAATTTCTTCAAAGCA +
Preference number: 1 (lower is better)
Translates to: LKYYNGLVTELPAPS*KLTLLVEAHNFFKA
Trigger: TGCTTTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGTTTCCAGCTGGGGGCAGGAAGTTCAGTTACAAGGCCATTATAATACTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659413.1
3UTR CCA 90 bp TTTGGTTCTAACGATGATTATGTTCTTTGGGAGGGATTTTATACATaGTTAACTCTTAACTGCAGATGCCAAATGAACTTCACAAATGGA +
Preference number: 1 (lower is better)
Translates to: FGSNDDYVLWEGFYT*LTLNCRCQMNFTNG
Trigger: TCCATTTGTGAAGTTCATTTGGCATCTGCAGTTAAGAGTTAACCATGTATAAAATCCCTCCCAAAGAACATAATCATCGTTAGAACCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR-3UTR TCA 90 bp TTTCTCAGTGTTGGGGCAAGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGAGTATCCAGCAAACGTaGGAGGTGAACCCACATAAA +
Preference number: 2 (lower is better)
Translates to: FLSVGASVCVCVCARARASIQQT*EVNPHK
Trigger: TTTATGTGGGTTCACCTCTCACGTTTGCTGGATACT...CGCGCGCGCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR-3UTR CCA 90 bp TTTCTCAGTGTTGGGGCAAGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGTCTAGACCAGTCACTTaGGAGGATGTGGGATTTCAT +
Preference number: 2 (lower is better)
Translates to: FLSVGASVCVCVCARARASRPVT*EDVGFH
Trigger: ATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGA...CGCGCGCGCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR-3UTR TCA 90 bp TTTCTCAGTGTTGGGGCAAGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGATCAGTTTCATTTCCTaGTCGGGAAAGGATGGAATG +
Preference number: 2 (lower is better)
Translates to: FLSVGASVCVCVCARARAISFIS*SGKDGM
Trigger: CATTCCATCCTTTCCCGATCAGGAAATGAAACTGAT...CGCGCGCGCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR-3UTR GCA 90 bp TTTCTCAGTGTTGGGGCAAGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGAACAAGAGAACAGAATaGAGCGGTATGAACTTGCTT +
Preference number: 2 (lower is better)
Translates to: FLSVGASVCVCVCARARANKRTE*SGMNLL
Trigger: AAGCAAGTTCATACCGCTGCATTCTGTTCTCTTGTT...CGCGCGCGCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR-3UTR CCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACGCAAGGGAAGAGCAGTaGCAAGGATCCCTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYAREEQ*QGSLGA
Trigger: TGCACCCAGGGATCCTTGCCACTGCTCTTCCCTTGC...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACGGGAGAAAGGACATCTaGGAGCAGTTTGCTAGTAGC +
Preference number: 2 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYGRKDI*EQFASS
Trigger: GCTACTAGCAAACTGCTCCCAGATGTCCTTTCTCCC...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CCA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATGGCATGAACTACATATaGCCCACACTTCTGAAATGC +
Preference number: 2 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNGMNYI*PTLLKC
Trigger: GCATTTCAGAAGTGTGGGCCATATGTAGTTCATGCC...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CCA 90 bp TTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTCATGCAAGGGAAGAGCAGTaGCAAGGATCCCTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: FNGIYLELKQSILVAQTHAREEQ*QGSLGA
Trigger: TGCACCCAGGGATCCTTGCCACTGCTCTTCCCTTGC...ATGAGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR-3UTR TCA 90 bp TCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCACGGGTGTGCCTAGGACAGTaGCCTATAAGTAGCAGGCAA +
Preference number: 2 (lower is better)
Translates to: STNHNSSTCLFLSSLCPRVCLGQ*PISSRQ
Trigger: TTGCCTGCTACTTATAGGTCACTGTCCTAGGCACAC...CCGTGGACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
3UTR-3UTR CCA 90 bp TTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGGTTTAATCTCACCAGCTGCTaGTATTTCAGGTTTTTCAAG +
Preference number: 2 (lower is better)
Translates to: FLDQSLGRMWDFIPRCGFNLTSC*YFRFFK
Trigger: CTTGAAAAACCTGAAATACCAGCAGCTGGTGAGATT...AAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CCA 90 bp TTCAGCCATGAATGCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTGGGAGAAAGGACATCTaGGAGCAGTTTGCTAGTAGC +
Preference number: 2 (lower is better)
Translates to: FSHECLQWHLPGAKTKYSGRKDI*EQFASS
Trigger: GCTACTAGCAAACTGCTCCCAGATGTCCTTTCTCCC...AGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGCATTCATGGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR-3UTR TCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACCTACTTTTTATGGCATaGACTACATATGGCCCACAC +
Preference number: 2 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYLLFMA*TTYGPH
Trigger: GTGTGGGCCATATGTAGTTCATGCCATAAAAAGTAG...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CCA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATTCTGAGCCCTATACTTaGTTAAGTTGTCATTTGAAG +
Preference number: 2 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNSEPYT*LSCHLK
Trigger: CTTCAAATGACAACTTAACCAAGTATAGGGCTCAGA...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR CAA 90 bp GCATTTGGCTGGCAAAATCTACATAAGCAGTCCCATCACATTCAGTaGTTGCTCTTTGCAAATACTCTGCTTGAACCAAAGTTGGACTTC +
Preference number: 2 (lower is better)
Translates to: AFGWQNLHKQSHHIQ*LLFANTLLEPKLDF
Trigger: GAAGTCCAACTTTGGTTCAAGCAGAGTATTTGCAAAGAGCAACAACTGAATGTGATGGGACTGCTTATGTAGATTTTGCCAGCCAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR GCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATGAGAAAGTTAATGTaGTTGGCCACTGGTAAGGAT +
Preference number: 2 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYMRKLM*LATGKD
Trigger: ATCCTTACCAGTGGCCAAGCACATTAACTTTCTCAT...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR GCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACTCAAATCTCACCAGCTaGTGGTATTTCAGGTTTTTC +
Preference number: 2 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYSNLTS*WYFRFF
Trigger: GAAAAACCTGAAATACCAGCAGCTGGTGAGATTTGA...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CCA 90 bp TCATCGGTAAGTGTGTTAGAATTGATTTCAGCCATGAATGCCTTCAATGGCATCGGCATGAACTACATATaGCCCACACTTCTGAAATGC +
Preference number: 2 (lower is better)
Translates to: SSVSVLELISAMNAFNGIGMNYI*PTLLKC
Trigger: GCATTTCAGAAGTGTGGGCCATATGTAGTTCATGCC...GATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACACTTACCGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR CAA 90 bp TTTGGCTGGCAAAATCTACATAAGCAGTCCCATCACATTCAGTTGTaGCTCTTTGCAAATACTCTGCTTGAACCAAAGTTGGACTTCAGT +
Preference number: 2 (lower is better)
Translates to: FGWQNLHKQSHHIQL*LFANTLLEPKLDFS
Trigger: ACTGAAGTCCAACTTTGGTTCAAGCAGAGTATTTGCAAAGAGCAACAACTGAATGTGATGGGACTGCTTATGTAGATTTTGCCAGCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR CAA 90 bp ATGATTTTGCATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTaGGCTGGCAAAATCTACATAAGCAGTCCCATCACATTCAGTTGT +
Preference number: 2 (lower is better)
Translates to: MILHLFVQALQLPWH*AGKIYISSPITFSC
Trigger: ACAACTGAATGTGATGGGACTGCTTATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATGCAAAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR TCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTCTCTCTCTTTTCACCTaGGAACAGCACCTACAGTTT +
Preference number: 2 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKILSLFT*EQHLQF
Trigger: AAACTGTAGGTGCTGTTCTCAGGTGAAAAGAGAGAG...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR GCA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATATGAGAAAGTTAATGTaGTTGGCCACTGGTAAGGAT +
Preference number: 2 (lower is better)
Translates to: FICTGPTTALAFGWQNLHMRKLM*LATGKD
Trigger: ATCCTTACCAGTGGCCAAGCACATTAACTTTCTCAT...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTATGAGAAAGTTAATGTaGTTGGCCACTGGTAAGGAT +
Preference number: 2 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPMRKLM*LATGKD
Trigger: ATCCTTACCAGTGGCCAAGCACATTAACTTTCTCAT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
3UTR-3UTR GCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATCACATTCAGTTGTTaGTCTTTGCAAATACTCTGC +
Preference number: 2 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYITFSC*SLQILC
Trigger: GCAGAGTATTTGCAAAGAGCAACAACTGAATGTGAT...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CCA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGACTTCAGTACAAATTTaGCACTTGCTCAAAGATGTA +
Preference number: 2 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWTSVQI*HLLKDV
Trigger: TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGT...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CCA 90 bp GCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTAATCTCACCAGCTGCTaGTATTTCAGGTTTTTCAAG +
Preference number: 2 (lower is better)
Translates to: AFNGIYLELKQSILVAQTNLTSC*YFRFFK
Trigger: CTTGAAAAACCTGAAATACCAGCAGCTGGTGAGATT...AGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTATGAGAAAGTTAATGTaGTTGGCCACTGGTAAGGAT +
Preference number: 2 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCMRKLM*LATGKD
Trigger: ATCCTTACCAGTGGCCAAGCACATTAACTTTCTCAT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
3UTR-3UTR GCA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATAGTTGTCATTTGAAGTaGAAAGTCAAGGTCAAGATT +
Preference number: 2 (lower is better)
Translates to: FICTGPTTALAFGWQNLHSCHLK*KVKVKI
Trigger: AATCTTGACCTTGACTTTGCACTTCAAATGACAACT...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CCA 90 bp TCATCGGTAAGTGTGTTAGAATTGATTTCAGCCATGAATGCCTTCAATGGCATCCTCAAAGATGTAGTGTaGTGTGCAATAGATAAAGTC +
Preference number: 2 (lower is better)
Translates to: SSVSVLELISAMNAFNGILKDVV*CAIDKV
Trigger: GACTTTATCTATTGCACACCACACTACATCTTTGAG...GATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACACTTACCGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR-3UTR CCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCGGGTTTAACTCACAATaGTCCAACGTTATTCCTATT +
Preference number: 2 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVGFNSQ*SNVIPI
Trigger: AATAGGAATAACGTTGGACCATTGTGAGTTAAACCC...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR TCA 90 bp TTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTTATTCCTTACTCACTTTACTTGTTaGAGCCCACAATTTCTTCAA +
Preference number: 2 (lower is better)
Translates to: FAYSKNSTNHNSSTCLFLTHFTC*SPQFLQ
Trigger: TTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGT...AAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
3UTR-3UTR CAA 90 bp TTTCTCAGTGTTGGGGCAAGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGGGCCCTACAACTGCCTaGGCATTTGGCTGGCAAAAT +
Preference number: 3 (lower is better)
Translates to: FLSVGASVCVCVCARARAGPTTA*AFGWQN
Trigger: ATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCC...CGCGCGCGCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR CCA 72 bp AAAAACCAGAATTCTGGCAAGATTATTTCTCAGTGTTaGGGCAAGTGTGTGTGTGTGTGTGTGTGCGCGCGC +
Preference number: 3 (lower is better)
Translates to: KNQNSGKIISQC*GKCVCVCVCAR
Trigger: GCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAATAATCTTGCCAGAATTCTGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR CCA 72 bp ATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTaGCAAAATCTACATAAGCAGTCCCATCACATTCAG +
Preference number: 3 (lower is better)
Translates to: ICTGPTTALAFG*QNLHKQSHHIQ
Trigger: CTGAATGTGATGGGACTGCTTATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CAA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACACATCTGGGAGCAGTTaGCTAGTAGCTTCCATGTTA +
Preference number: 3 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYTSGSS*LVASML
Trigger: TAACATGGAAGCTACTAGCAAACTGCTCCCAGATGT...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR CCA 72 bp TATAATGGCCTTGTAACTGAACTTCCTGCCCCCAGCTaGAAACTCACTTTACTTGTTGAAGCCCACAATTTC +
Preference number: 3 (lower is better)
Translates to: YNGLVTELPAPS*KLTLLVEAHNF
Trigger: GAAATTGTGGGCTTCAACAAGTAAAGTGAGTTTCCAGCTGGGGGCAGGAAGTTCAGTTACAAGGCCATTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659413.1
3UTR-3UTR CAA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACCTGCTTGAACCAAAGTaGGACTTCAGTGGATTAATC +
Preference number: 3 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYLLEPK*DFSGLI
Trigger: GATTAATCCACTGAAGTCCAACTTTGGTTCAAGCAG...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CAA 90 bp GCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTCAACTGCCTTGGCATTaGGCTGGCAAAATCTACATA +
Preference number: 3 (lower is better)
Translates to: AFNGIYLELKQSILVAQTQLPWH*AGKIYI
Trigger: TATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTG...AGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR CCA 72 bp TCAAGATTATTTCTAGACCAGTCACTTGGGAGGATGTaGGATTTCATCCCCAGATGTGGGTTTAACTCACAA +
Preference number: 3 (lower is better)
Translates to: SRLFLDQSLGRM*DFIPRCGFNSQ
Trigger: TTGTGAGTTAAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAATCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR CCA 72 bp ATTTTGCATTTATTTGTACAGGCCCTACAACTGCCTTaGCATTTGGCTGGCAAAATCTACATAAGCAGTCCC +
Preference number: 3 (lower is better)
Translates to: ILHLFVQALQLP*HLAGKIYISSP
Trigger: GGGACTGCTTATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATGCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CAA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATAGAAAGTTAATGTGCTaGGCCACTGGTAAGGATGAA +
Preference number: 3 (lower is better)
Translates to: FICTGPTTALAFGWQNLHRKLMC*ATGKDE
Trigger: TTCATCCTTACCAGTGGCCAAGCACATTAACTTTCT...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTAGAAAGTTAATGTGCTaGGCCACTGGTAAGGATGAA +
Preference number: 3 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPRKLMC*ATGKDE
Trigger: TTCATCCTTACCAGTGGCCAAGCACATTAACTTTCT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
3UTR TCA 72 bp CAGTGGAGCTATATAAATACTGTTTTAGTGAACCAGTaGCGGAAACACTGGGGAGGACAGGAATCAATCAAT +
Preference number: 3 (lower is better)
Translates to: QWSYINTVLVNQ*RKHWGGQESIN
Trigger: ATTGATTGATTCCTGTCCTCCCCAGTGTTTCCGTCACTGGTTCACTAAAACAGTATTTATATAGCTCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR-3UTR CAA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATAGAAAGTTAATGTGCTaGGCCACTGGTAAGGATGAA +
Preference number: 3 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNRKLMC*ATGKDE
Trigger: TTCATCCTTACCAGTGGCCAAGCACATTAACTTTCT...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CAA 90 bp CTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCACCTACAGTTTCCATTAAACACTTCAGTACAAATTaGGCACTTGCTCAAAGATGT +
Preference number: 3 (lower is better)
Translates to: LSLSLSFHLRTAPTVSIKHFSTN*ALAQRC
Trigger: ACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTG...TTTAATGGAAACTGTAGGTGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CAA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATTTCAGTTGTTGCTCTTaGCAAATACTCTGCTTGAAC +
Preference number: 3 (lower is better)
Translates to: FICTGPTTALAFGWQNLHFSCCS*QILCLN
Trigger: GTTCAAGCAGAGTATTTGCAAAGAGCAACAACTGAA...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR-3UTR CAA 90 bp CTTTCCCTTTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTCTTAAAATCCGGGTTTaGTCTGTGGGTGGGTTTTTG +
Preference number: 3 (lower is better)
Translates to: LSLLPTQRILLTITLPPVLKIRV*SVGGFL
Trigger: CAAAAACCCACCCACAGACAAAACCCGGATTTTAAG...AACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAAAGGGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000659413.1
3UTR-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTAGAAAGTTAATGTGCTaGGCCACTGGTAAGGATGAA +
Preference number: 3 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCRKLMC*ATGKDE
Trigger: TTCATCCTTACCAGTGGCCAAGCACATTAACTTTCT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
3UTR TCA 72 bp TTAACCGTCAGAACAAGAGAACAGAATGCAGCGGTATaGACTTGCTTTTTGTTTCGGTTCATGCACAGTTTA +
Preference number: 3 (lower is better)
Translates to: LTVRTREQNAAV*TCFLFRFMHSL
Trigger: TAAACTGTGCATGAACCGAAACAAAAAGCAAGTTCATACCGCTGCATTCTGTTCTCTTGTTCTGACGGTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR-3UTR CAA 90 bp TCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCACGGAACTCACTTTACTTGTaGAAGCCCACAATTTCTTCA +
Preference number: 3 (lower is better)
Translates to: STNHNSSTCLFLSSLCPRNSLYL*KPTISS
Trigger: TGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGTT...CCGTGGACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
3UTR TCA 72 bp TCACATTCAGTTGTTGCTCTTTGCAAATACTCTGCTTaGACCAAAGTTGGACTTCAGTGGATTAATCTGACA +
Preference number: 3 (lower is better)
Translates to: SHSVVALCKYSA*TKVGLQWINLT
Trigger: TGTCAGATTAATCCACTGAAGTCCAACTTTGGTTCAAGCAGAGTATTTGCAAAGAGCAACAACTGAATGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR TCA 72 bp TTCATAACATGGTGTAAAGTAAGTATCCAGCAAACGTaGGAGGTGAACCCACATAAATCGGAAGGAATTTGT +
Preference number: 3 (lower is better)
Translates to: FITWCKVSIQQT*EVNPHKSEGIC
Trigger: ACAAATTCCTTCCGATTTATGTGGGTTCACCTCTCACGTTTGCTGGATACTTACTTTACACCATGTTATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR GCA 72 bp AAAATCTACATAAGCAGTCCCATCACATTCAGTTGTTaGTCTTTGCAAATACTCTGCTTGAACCAAAGTTGG +
Preference number: 3 (lower is better)
Translates to: KIYISSPITFSC*SLQILCLNQSW
Trigger: CCAACTTTGGTTCAAGCAGAGTATTTGCAAAGAGCAACAACTGAATGTGATGGGACTGCTTATGTAGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR CCA 72 bp TGGGATTTCATCCCCAGATGTGGGTTTAACTCACAATaGTCCAACGTTATTCCTATTATTAGTACCATAATC +
Preference number: 3 (lower is better)
Translates to: WDFIPRCGFNSQ*SNVIPIISTII
Trigger: GATTATGGTACTAATAATAGGAATAACGTTGGACCATTGTGAGTTAAACCCACATCTGGGGATGAAATCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR CCA 72 bp TGTGTTAGAATTGATTTCAGCCATGAATGCCTTCAATaGCATCTACCTGGAGCTAAAACAAAGTATTCTTGT +
Preference number: 3 (lower is better)
Translates to: CVRIDFSHECLQ*HLPGAKTKYSC
Trigger: ACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR CCA 72 bp ATAAGAGGATTTGGTTCTAACGATGATTATGTTCTTTaGGAGGGATTTTATACATGGTTAACTCTTAACTGC +
Preference number: 3 (lower is better)
Translates to: IRGFGSNDDYVL*EGFYTWLTLNC
Trigger: GCAGTTAAGAGTTAACCATGTATAAAATCCCTCCCAAAGAACATAATCATCGTTAGAACCAAATCCTCTTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp TTTCTCAGTGTTGGGGCAAGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGTGGCAGCTTCCCTCCTaGAGATACCTGCATTGCAGC +
Preference number: 4 (lower is better)
Translates to: FLSVGASVCVCVCARARAWQLPS*RYLHCS
Trigger: GCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCA...CGCGCGCGCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp TTTCTCAGTGTTGGGGCAAGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGGCAGCATATAACTGCTaGAGTTGGAGTGGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: FLSVGASVCVCVCARARAAAYNC*SWSGPK
Trigger: CTTAGGCCCACTCCAACTGCAGCAGTTATATGCTGC...CGCGCGCGCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp TTTCTCAGTGTTGGGGCAAGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGCTTCATCCTTGCTTTTaGGTGGTGGGCTGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: FLSVGASVCVCVCARARALHPCF*VVGCLC
Trigger: GCACAAACAGCCCACCACCCAAAAGCAAGGATGAAG...CGCGCGCGCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp CTGCCCCCAGCTGGAAACTCACTTTACTTGTTGAAGCCCACAATTTCTTCAAAGGCGTGGGATGCAAAGTaGCACAGAGGCGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LPPAGNSLYLLKPTISSKAWDAK*HRGGLG
Trigger: CCCCAGCCCGCCTCTGTGCCACTTTGCATCCCACGC...CTTTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGTTTCCAGCTGGGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR GCA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGTGGGCAGCCAACAGCTaGTCTCGGAGGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWWAANS*SRRLVS
Trigger: GCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCA...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp CTGCCCCCAGCTGGAAACTCACTTTACTTGTTGAAGCCCACAATTTCTTCAAAGTGGGCAGCCAACAGCTaGTCTCGGAGGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LPPAGNSLYLLKPTISSKWAANS*SRRLVS
Trigger: GCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCA...CTTTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGTTTCCAGCTGGGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp TTTCTCAGTGTTGGGGCAAGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGAAACGAAAAACAGGTTaGTGGCAACCCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: FLSVGASVCVCVCARARAKRKTG*WQPTSF
Trigger: AAAAGATGTGGGTTGCCACCAACCTGTTTTTCGTTT...CGCGCGCGCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR TCA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATACATGCAAGGGAAGGTaGAAGGCTGGGAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNTCKGR*KAGSPS
Trigger: TGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGT...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATGCAGCCAGTGTCCGTTaGTCAGGAGGGAATACGGGA +
Preference number: 4 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNAASVR*SGGNTG
Trigger: TCCCGTATTCCCTCCTGATCAACGGACACTGGCTGC...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATTCCTTGCTGGGCAGCTaGAGCCAGTGTCCGTTGATC +
Preference number: 4 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNSLLGS*SQCPLI
Trigger: GATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGA...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp CACACTTCTGAAATGCTAAAGGCCTCCACCTCACTTCATGGAGGGGTGAAAAATGGGAGGAGGAATCCTTaGTGGGCAGCTGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: HTSEMLKASTSLHGGVKNGRRNP*WAAAAS
Trigger: ACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCC...ATTTTTCACCCCTCCATGAAGTGAGGTGGAGGCCTTTAGCATTTCAGAAGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp TTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGGTTTAGTGGCAAGGATCCCTaGGTGCAGCCAGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: FLDQSLGRMWDFIPRCGFSGKDP*VQPGSI
Trigger: AATGGAGCCTGGCTGCACCCAGGGATCCTTGCCACT...AAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATGCAAGGGAAGAGCAGTaGCAAGGATCCCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNAREEQ*QGSLGA
Trigger: TGCACCCAGGGATCCTTGCCACTGCTCTTCCCTTGC...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGGGCTACCTCTCCATCTaGTTCCCCATACGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWGYLSI*FPIRRG
Trigger: GCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCC...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp CTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCACCTACAGTTTCCATTAAATGGGCAGCCAACAGCTaGTCTCGGAGGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LSLSLSFHLRTAPTVSIKWAANS*SRRLVS
Trigger: GCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCA...TTTAATGGAAACTGTAGGTGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTGGGCAGCCAACAGCTaGTCTCGGAGGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPWAANS*SRRLVS
Trigger: GCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGTCCTTGCTGGGCAGCTaGAGCCAGTGTCCGTTGATC +
Preference number: 4 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWSLLGS*SQCPLI
Trigger: GATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGA...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTCCTCCGGCGTGGGATaGAAAGTGGCACAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPSSGVG*KVAQRR
Trigger: CCGCCTCTGTGCCACTTTGCATCCCACGCCGGAGGA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CCA 90 bp CACACTTCTGAAATGCTAAAGGCCTCCACCTCACTTCATGGAGGGGTGAAAAATGCACCAAGGTTGCCTTaGGGTATGCCTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HTSEMLKASTSLHGGVKNAPRLP*GMPGSF
Trigger: GAAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGC...ATTTTTCACCCCTCCATGAAGTGAGGTGGAGGCCTTTAGCATTTCAGAAGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACACATGCAAGGGAAGGTaGAAGGCTGGGAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYTCKGR*KAGSPS
Trigger: TGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGT...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGCAGCTAAACTGCCCTTaGGCCGTTCAGGAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWQLNCP*AVQEFP
Trigger: TGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTG...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp CTGCCCCCAGCTGGAAACTCACTTTACTTGTTGAAGCCCACAATTTCTTCAAAGCAGCTAAACTGCCCTTaGGCCGTTCAGGAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LPPAGNSLYLLKPTISSKQLNCP*AVQEFP
Trigger: TGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTG...CTTTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGTTTCCAGCTGGGGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGGGAGGAGGAATCCTTaGTGGGCAGCTGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPGRRNP*WAAAAS
Trigger: ACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp GCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTGGTTGCCTTGGGGTATaGCTGGCAGCTTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: AFNGIYLELKQSILVAQTGCLGV*LAASLL
Trigger: CAGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACC...AGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGGTTGCCTTGGGGTATaGCTGGCAGCTTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPGCLGV*LAASLL
Trigger: CAGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp TTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGGTTTGTGCCACTTCATCCTTaGTTTTGGGTGGTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FLDQSLGRMWDFIPRCGFVPLHP*FWVVGC
Trigger: ACAGCCCACCACCCAAAAGCAAGGATGAAGTGGCAC...AAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCATCCACCAGGCAGGTaGGCTTTGGCCTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPHPPGR*ALAWAC
Trigger: ACAAGCCCAGGCCAAAGCGCACCTGCCTGGTGGATG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATTACAGGCCCTACAACTaGCTTGGCATTTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNYRPYN*LGIWLA
Trigger: TGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTA...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp TTGAATTTATTTAACTGGGGAGGTGGAAGGGACTCTTATTCATTGTTGTGTGCCTCCTCCGGCGTGGGATaGAAAGTGGCACAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LNLFNWGGGRDSYSLLCASSGVG*KVAQRR
Trigger: CCGCCTCTGTGCCACTTTGCATCCCACGCCGGAGGA...GGCACACAACAATGAATAAGAGTCCCTTCCACCTCCCCAGTTAAATAAATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACAGGAGGAATCCTTGCTaGGCAGCTGCAGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYRRNPC*AAAASV
Trigger: GACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCT...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATGCCTTGGGGTATGCCTaGCAGCTTCCCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FICTGPTTALAFGWQNLHALGYA*QLPSWR
Trigger: TCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGC...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGCCTTGGGGTATGCCTaGCAGCTTCCCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPALGYA*QLPSWR
Trigger: TCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTAGGGCATCCCAGCCATaGCGATGGCTCCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPRASQP*RWLQGT
Trigger: TGTACCCTGGAGCCATCGCCATGGCTGGGATGCCCT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGCGTGGGATGCAAAGTaGCACAGAGGCGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCAWDAK*HRGGLG
Trigger: CCCCAGCCCGCCTCTGTGCCACTTTGCATCCCACGC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR TCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTACATGCAAGGGAAGGTaGAAGGCTGGGAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPTCKGR*KAGSPS
Trigger: TGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000646273.1
CDS-3UTR TCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGCAGCCAGTGTCCGTTaGTCAGGAGGGAATACGGGA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPAASVR*SGGNTG
Trigger: TCCCGTATTCCCTCCTGATCAACGGACACTGGCTGC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR TCA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGCACAGCAGCCACCTATaGTCGTCTCCAACTGAACCT +
Preference number: 4 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWHSSHL*SSPTEP
Trigger: AGGTTCAGTTGGAGACGATCATAGGTGGCTGCTGTG...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGGCTACCTCTCCATCTaGTTCCCCATACGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPGYLSI*FPIRRG
Trigger: GCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTGGGCAGCCAACAGCTaGTCTCGGAGGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCWAANS*SRRLVS
Trigger: GCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGGCAGCTAGTTTCTTCTaGTCATCGTGGGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWAASFF*SSWAAN
Trigger: GTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGC...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTGCTGCGGCAGCAGCTaGCATGGTAGTTGGGATCAG +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPCCGSS*HGSWDQ
Trigger: CTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATGCAGCATATAACTGCTaGAGTTGGAGTGGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNAAYNC*SWSGPK
Trigger: CTTAGGCCCACTCCAACTGCAGCAGTTATATGCTGC...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCAGCAGCACCAAGGTTaGCTTGGGGTATGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPQQHQG*LGVCLA
Trigger: TGCCAGGCATACCCCAAGGCAACCTTGGTGCTGCTG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp TCATCGGTAAGTGTGTTAGAATTGATTTCAGCCATGAATGCCTTCAATGGCATCCATCCACCAGGCAGGTaGGCTTTGGCCTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SSVSVLELISAMNAFNGIHPPGR*ALAWAC
Trigger: ACAAGCCCAGGCCAAAGCGCACCTGCCTGGTGGATG...GATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACACTTACCGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp CACACTTCTGAAATGCTAAAGGCCTCCACCTCACTTCATGGAGGGGTGAAAAATTACAGGCCCTACAACTaGCTTGGCATTTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HTSEMLKASTSLHGGVKNYRPYN*LGIWLA
Trigger: TGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTA...ATTTTTCACCCCTCCATGAAGTGAGGTGGAGGCCTTTAGCATTTCAGAAGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp GCCCCCAGCTGGAAACTCACTTTACTTGTTGAAGCCCACAATTTCTTCAAAGCACGGAGGCTGGTCAGCTaGTTGATCATACCCATGAGT +
Preference number: 4 (lower is better)
Translates to: APSWKLTLLVEAHNFFKARRLVS*LIIPMS
Trigger: ACTCATGGGTATGATCAACCAGCTGACCAGCCTCCG...TGCTTTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGTTTCCAGCTGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTAGGAGGAATCCTTGCTaGGCAGCTGCAGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPRRNPC*AAAASV
Trigger: GACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGCACCAAGGTTGCCTTaGGGTATGCCTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPAPRLP*GMPGSF
Trigger: GAAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACCCCATACGGAGAGGCTaGTCGCTTGGAAGACATCCT +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYPIRRG*SLGRHP
Trigger: AGGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGG...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATGGGAGAAAGGACATCTaGGAGCAGTTTGCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNGRKDI*EQFASS
Trigger: GCTACTAGCAAACTGCTCCCAGATGTCCTTTCTCCC...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp CTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCACCTACAGTTTCCATTAAAGCAAGGGAAGAGCAGTaGCAAGGATCCCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: LSLSLSFHLRTAPTVSIKAREEQ*QGSLGA
Trigger: TGCACCCAGGGATCCTTGCCACTGCTCTTCCCTTGC...TTTAATGGAAACTGTAGGTGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp TCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCACGGCCCCCGGGAGGAGACTaGAGATGGGTTTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: STNHNSSTCLFLSSLCPRPPGGD*RWVLVA
Trigger: AGCCACCAAAACCCATCTCCAGTCTCCTCCCGGGGG...CCGTGGACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTATGCCTCCTCCGGCGTaGGATGCAAAGTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPMPPPA*DAKWHR
Trigger: TCTGTGCCACTTTGCATCCCACGCCGGAGGAGGCAT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR TCA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATGTTAATGGAACCAACTaGCCAGGGAGAAAGGACATC +
Preference number: 4 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNVNGTN*PGRKDI
Trigger: GATGTCCTTTCTCCCTGGTCAGTTGGTTCCATTAAC...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp TCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCACGGTCATGCAAGGGAAGGTaGAAGGCTGGGAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: STNHNSSTCLFLSSLCPRSCKGR*KAGSPS
Trigger: TGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGA...CCGTGGACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR GCA 90 bp TTGAATTTATTTAACTGGGGAGGTGGAAGGGACTCTTATTCATTGTTGTGTGCCGGCTACCTCTCCATCTaGTTCCCCATACGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LNLFNWGGGRDSYSLLCAGYLSI*FPIRRG
Trigger: GCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCC...GGCACACAACAATGAATAAGAGTCCCTTCCACCTCCCCAGTTAAATAAATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCAGCTAAACTGCCCTTaGGCCGTTCAGGAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPQLNCP*AVQEFP
Trigger: TGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp TTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTCATGGGAGGAGGAATCCTTaGTGGGCAGCTGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: FNGIYLELKQSILVAQTHGRRNP*WAAAAS
Trigger: ACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCC...ATGAGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCCTCCTGGAGATACCTaGATTGCAGCTAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPPPGDT*IAASWA
Trigger: TGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCGGTTGCCTTGGGGTATaGCTGGCAGCTTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVGCLGV*LAASLL
Trigger: CAGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACC...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGGTTGCCTTGGGGTATaGCTGGCAGCTTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCGCLGV*LAASLL
Trigger: CAGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATCAGCAGCACCAAGGTTaGCTTGGGGTATGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNQQHQG*LGVCLA
Trigger: TGCCAGGCATACCCCAAGGCAACCTTGGTGCTGCTG...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCACATCCACCAGGCAGGTaGGCTTTGGCCTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTAHPPGR*ALAWAC
Trigger: ACAAGCCCAGGCCAAAGCGCACCTGCCTGGTGGATG...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp CTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCACCTACAGTTTCCATTAAACAATGCGCAGCTTTTTaGCATCCACCAGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LSLSLSFHLRTAPTVSIKQCAAF*HPPGRC
Trigger: GCACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTG...TTTAATGGAAACTGTAGGTGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCAATGCGCAGCTTTTTaGCATCCACCAGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPQCAAF*HPPGRC
Trigger: GCACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGGCCAGCACAGCACCTaGCACATTTGGGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCGQHST*HIWGGL
Trigger: CAAGCCTCCCCAAATGTGGCAGGTGCTGTGCTGGCC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCGGGAAGGTGAAAGGCTaGGAGCCCGTCACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVGKVKG*EPVTLL
Trigger: GAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCC...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp TCATCGGTAAGTGTGTTAGAATTGATTTCAGCCATGAATGCCTTCAATGGCATCAGGAGGAATCCTTGCTaGGCAGCTGCAGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SSVSVLELISAMNAFNGIRRNPC*AAAASV
Trigger: GACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCT...GATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACACTTACCGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTGGCAGCTTCCCTCCTaGAGATACCTGCATTGCAGC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPWQLPS*RYLHCS
Trigger: GCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTGCCTTGGGGTATGCCTaGCAGCTTCCCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKIALGYA*QLPSWR
Trigger: TCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGC...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTAGGGCATCCCAGCCATaGCGATGGCTCCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKIRASQP*RWLQGT
Trigger: TGTACCCTGGAGCCATCGCCATGGCTGGGATGCCCT...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTAGGGCATCCCAGCCATaGCGATGGCTCCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCRASQP*RWLQGT
Trigger: TGTACCCTGGAGCCATCGCCATGGCTGGGATGCCCT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCCCCCGGGAGGAGACTaGAGATGGGTTTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCPPGGD*RWVLVA
Trigger: AGCCACCAAAACCCATCTCCAGTCTCCTCCCGGGGG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CCA 90 bp GCCCCCAGCTGGAAACTCACTTTACTTGTTGAAGCCCACAATTTCTTCAAAGCAAGCACCTGCCACATTTaGGGAGGCTTGTCCAAAACT +
Preference number: 4 (lower is better)
Translates to: APSWKLTLLVEAHNFFKASTCHI*GGLSKT
Trigger: AGTTTTGGACAAGCCTCCCCAAATGTGGCAGGTGCT...TGCTTTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGTTTCCAGCTGGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR TCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGCAGCCAGTGTCCGTTaGTCAGGAGGGAATACGGGA +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCAASVR*SGGNTG
Trigger: TCCCGTATTCCCTCCTGATCAACGGACACTGGCTGC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR TCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTCATGCAAGGGAAGGTaGAAGGCTGGGAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCSCKGR*KAGSPS
Trigger: TGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537393.5
CDS-3UTR GCA 90 bp TTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTCATGGCTACCTCTCCATCTaGTTCCCCATACGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: FNGIYLELKQSILVAQTHGYLSI*FPIRRG
Trigger: GCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCC...ATGAGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGGCTACCTCTCCATCTaGTTCCCCATACGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCGYLSI*FPIRRG
Trigger: GCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCAACATCAGCTAAACTaGCCTTGCGCCGTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPQHQLN*PCAVQE
Trigger: CTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTCCTTGCTGGGCAGCTaGAGCCAGTGTCCGTTGATC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCSLLGS*SQCPLI
Trigger: GATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTTGCTGCGGCAGCAGCTaGCATGGTAGTTGGGATCAG +
Preference number: 4 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKICCGSS*HGSWDQ
Trigger: CTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCA...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTGCTGCGGCAGCAGCTaGCATGGTAGTTGGGATCAG +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCCCGSS*HGSWDQ
Trigger: CTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCACAGCAGCACCAAGGTTaGCTTGGGGTATGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTAQQHQG*LGVCLA
Trigger: TGCCAGGCATACCCCAAGGCAACCTTGGTGCTGCTG...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGTGCCACTTCATCCTTaGTTTTGGGTGGTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPVPLHP*FWVVGC
Trigger: ACAGCCCACCACCCAAAAGCAAGGATGAAGTGGCAC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451604.7
ENST00000537393.5
CDS-3UTR GCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACTTATGTGGGGTTCATTaGTACCACGCCCTCGGGATT +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYLCGVH*YHALGI
Trigger: AATCCCGAGGGCGTGGTAGCAATGAACCCCACATAA...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp TCCCTTTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTTATGGCCAGCACAGCACCTaGCACATTTGGGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SLLPTQRILLTITLPPVYGQHST*HIWGGL
Trigger: CAAGCCTCCCCAAATGTGGCAGGTGCTGTGCTGGCC...ATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp CACACTTCTGAAATGCTAAAGGCCTCCACCTCACTTCATGGAGGGGTGAAAAATCAGAGTGAGGCTTGTTaGGAAAACTCACATGCAAGG +
Preference number: 4 (lower is better)
Translates to: HTSEMLKASTSLHGGVKNQSEAC*ENSHAR
Trigger: CCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTG...ATTTTTCACCCCTCCATGAAGTGAGGTGGAGGCCTTTAGCATTTCAGAAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGCGTCAGCAGAGAAACTaGCTGAAATTCCTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWRQQRN*LKFLRV
Trigger: CACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACG...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp TTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGGTTTGTAGTTTTTCAATACTaGGGGTTTCTTCCGGCTCGT +
Preference number: 4 (lower is better)
Translates to: FLDQSLGRMWDFIPRCGFVVFQY*GFLPAR
Trigger: ACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTAC...AAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp CTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCACCTACAGTTTCCATTAAATTCTTCTGCTCATCGTaGGCAGCCAACAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LSLSLSFHLRTAPTVSIKFFCSS*AANSCS
Trigger: AGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAA...TTTAATGGAAACTGTAGGTGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTTCTTCTGCTCATCGTaGGCAGCCAACAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPFFCSS*AANSCS
Trigger: AGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTAGGAGGAATCCTTGCTaGGCAGCTGCAGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCRRNPC*AAAASV
Trigger: GACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGCACCAAGGTTGCCTTaGGGTATGCCTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCAPRLP*GMPGSF
Trigger: GAAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCAAGTGGCAAGGATCCCTaGGTGCAGCCAGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTASGKDP*VQPGSI
Trigger: AATGGAGCCTGGCTGCACCCAGGGATCCTTGCCACT...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATGTTGTGTGGGGCAAATaGAGACATAACTTTATTGCC +
Preference number: 4 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNVVWGK*RHNFIA
Trigger: GGCAATAAAGTTATGTCTTCATTTGCCCCACACAAC...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCCTTCTTCTGCCTTCTaGGGTGAGGTAGATGAGTTG +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPPSSAF*GEVDEL
Trigger: CAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR TCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACGTTAATGGAACCAACTaGCCAGGGAGAAAGGACATC +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYVNGTN*PGRKDI
Trigger: GATGTCCTTTCTCCCTGGTCAGTTGGTTCCATTAAC...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATTGGCCACAAGTCTCTTaGGTCAGCAGAGAAACTGGC +
Preference number: 4 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNWPQVS*VSRETG
Trigger: GCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCA...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp TTGAATTTATTTAACTGGGGAGGTGGAAGGGACTCTTATTCATTGTTGTGTGCCCAACATCAGCTAAACTaGCCTTGCGCCGTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LNLFNWGGGRDSYSLLCAQHQLN*PCAVQE
Trigger: CTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTG...GGCACACAACAATGAATAAGAGTCCCTTCCACCTCCCCAGTTAAATAAATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR GCA 90 bp CACACTTCTGAAATGCTAAAGGCCTCCACCTCACTTCATGGAGGGGTGAAAAATCTGCTGCTGCTGTCTTaGAATTTGTTCTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: HTSEMLKASTSLHGGVKNLLLLS*NLFLLL
Trigger: CAGCAACAAGAACAAATTGCAAGACAGCAGCAGCAG...ATTTTTCACCCCTCCATGAAGTGAGGTGGAGGCCTTTAGCATTTCAGAAGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATTGTAGAAGCTGCTGCTaGTGTCTTGCAATTTGTTCT +
Preference number: 4 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNCRSCC*CLAICS
Trigger: AGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACA...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGCAGCATATAACTGCTaGAGTTGGAGTGGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPAAYNC*SWSGPK
Trigger: CTTAGGCCCACTCCAACTGCAGCAGTTATATGCTGC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTCCTCCTGGAGATACCTaGATTGCAGCTAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKIPPGDT*IAASWA
Trigger: TGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGG...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCCTCCTGGAGATACCTaGATTGCAGCTAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCPPGDT*IAASWA
Trigger: TGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGTGGTGGGCTGTTTGTaGTCTTGTCTGTGTGAATGC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPVVGCL*SCLCEC
Trigger: GCATTCACACAGACAAGAGCACAAACAGCCCACCAC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATGTGGTGGGCTGTTTGTaGTCTTGTCTGTGTGAATGC +
Preference number: 4 (lower is better)
Translates to: FICTGPTTALAFGWQNLHVVGCL*SCLCEC
Trigger: GCATTCACACAGACAAGAGCACAAACAGCCCACCAC...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTTATGTGGGGTTCATTaGTACCACGCCCTCGGGATT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPLCGVH*YHALGI
Trigger: AATCCCGAGGGCGTGGTAGCAATGAACCCCACATAA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCACAATGCGCAGCTTTTTaGCATCCACCAGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTAQCAAF*HPPGRC
Trigger: GCACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTG...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCAATGCGCAGCTTTTTaGCATCCACCAGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCQCAAF*HPPGRC
Trigger: GCACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGTCTGCTTGTCACCATaGCTACCTCTCCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPVCLSP*LPLHLL
Trigger: AAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGAC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACCAGAGTGAGGCTTGTTaGGAAAACTCACATGCAAGG +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYQSEAC*ENSHAR
Trigger: CCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTG...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGTTCTTGTTGCTGCTTaGCCAGCTCCATTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPVLVAA*PAPFAD
Trigger: GTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAAC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATAGCTGCCATGGTAGTTaGGATCAGCTGAACAGGGTA +
Preference number: 4 (lower is better)
Translates to: FICTGPTTALAFGWQNLHSCHGS*DQLNRV
Trigger: TACCCTGTTCAGCTGATCCCAACTACCATGGCAGCT...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTAGCTGCCATGGTAGTTaGGATCAGCTGAACAGGGTA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPSCHGS*DQLNRV
Trigger: TACCCTGTTCAGCTGATCCCAACTACCATGGCAGCT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTATAACTGCTGCAGTTaGAGTGGGCCTAAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPYNCCS*SGPKPG
Trigger: ACCAGGCTTAGGCCCACTCCAACTGCAGCAGTTATA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTGCATTGCAGCTAGCTaGGCAGCATATAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPCIAAS*AAYNCC
Trigger: GCAGCAGTTATATGCTGCCCAGCTAGCTGCAATGCA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCTGGCAGCTTCCCTCCTaGAGATACCTGCATTGCAGC +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVWQLPS*RYLHCS
Trigger: GCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCA...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTGGCAGCTTCCCTCCTaGAGATACCTGCATTGCAGC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCWQLPS*RYLHCS
Trigger: GCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACGAGAGGCTGGTCGCTTaGAAGACATCCTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYERLVA*KTSFQT
Trigger: AGTTTGAAAGGATGTCTTCCAAGCGACCAGCCTCTC...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCCCATACGGAGAGGCTaGTCGCTTGGAAGACATCCT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCPIRRG*SLGRHP
Trigger: AGGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTAAGGGCATCCCAGCCATaGCGATGGCTCCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVRASQP*RWLQGT
Trigger: TGTACCCTGGAGCCATCGCCATGGCTGGGATGCCCT...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGGGAGAAAGGACATCTaGGAGCAGTTTGCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPGRKDI*EQFASS
Trigger: GCTACTAGCAAACTGCTCCCAGATGTCCTTTCTCCC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGCCCTACAACTGCCTTaGCATTTGGCTGGCAAAATC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPALQLP*HLAGKI
Trigger: GATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGGAGGAGACTGGAGATaGGTTTTGGTGGCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCGGDWR*VLVARL
Trigger: AAGGCGAGCCACCAAAACCCATCTCCAGTCTCCTCC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGATCCTCCTGAAGTATaGCTCTACACCTTGGACCGT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPDPPEV*LYTLDR
Trigger: ACGGTCCAAGGTGTAGAGCCATACTTCAGGAGGATC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CCA 90 bp TTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGGTTTCATGAATGCCTTCAATaGCATCTACCTGGAGCTAAA +
Preference number: 4 (lower is better)
Translates to: FLDQSLGRMWDFIPRCGFHECLQ*HLPGAK
Trigger: TTTAGCTCCAGGTAGATGCCATTGAAGGCATTCATG...AAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp GCTGGAAACTCACTTTACTTGTTGAAGCCCACAATTTCTTCAAAGCATATCTCACCCATACGGAGAGGCTaGTCGCTTGGAAGACATCTC +
Preference number: 4 (lower is better)
Translates to: AGNSLYLLKPTISSKHISPIRRG*SLGRHL
Trigger: GAGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGG...TGAGATATGCTTTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGTTTCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR TCA 90 bp GCCCCCAGCTGGAAACTCACTTTACTTGTTGAAGCCCACAATTTCTTCAAAGCAGTTGTGTGGGGCAAATaGAGACATAACTTTATTGCC +
Preference number: 4 (lower is better)
Translates to: APSWKLTLLVEAHNFFKAVVWGK*RHNFIA
Trigger: GGCAATAAAGTTATGTCTTCATTTGCCCCACACAAC...TGCTTTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGTTTCCAGCTGGGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR TCA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATCCTTCTTCTGCCTTCTaGGGTGAGGTAGATGAGTTG +
Preference number: 4 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNPSSAF*GEVDEL
Trigger: CAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGG...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp TTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGGTTTGTTGCTGGAGCAAATTaGTTTTGTGTTGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: FLDQSLGRMWDFIPRCGFVAGAN*FCVVAV
Trigger: TACAGCAACAACACAAAATCAATTTGCTCCAGCAAC...AAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATGTGCTCTTGTCTGTGTaGATGCTGGTAGGAGATACA +
Preference number: 4 (lower is better)
Translates to: FICTGPTTALAFGWQNLHVLLSV*MLVGDT
Trigger: TGTATCTCCTACCAGCATTCACACAGACAAGAGCAC...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGTGCTCTTGTCTGTGTaGATGCTGGTAGGAGATACA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPVLLSV*MLVGDT
Trigger: TGTATCTCCTACCAGCATTCACACAGACAAGAGCAC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR TCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCCACAGCAGCCACCTATaGTCGTCTCCAACTGAACCT +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVHSSHL*SSPTEP
Trigger: AGGTTCAGTTGGAGACGATCATAGGTGGCTGCTGTG...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGATCCTTTCAAACTCCTaGGGTAAATCAGGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWILSNS*GKSGSV
Trigger: TACTGACCCTGATTTACCTCAGGAGTTTGAAAGGAT...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp CTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCACCTACAGTTTCCATTAAATTAACTGCCAGTTGCTaGGTCAGACTCTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LSLSLSFHLRTAPTVSIKLTASC*VRLSSV
Trigger: AACACTGGAGAGTCTGACTCAGCAACTGGCAGTTAA...TTTAATGGAAACTGTAGGTGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTTAACTGCCAGTTGCTaGGTCAGACTCTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPLTASC*VRLSSV
Trigger: AACACTGGAGAGTCTGACTCAGCAACTGGCAGTTAA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR TCA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGATCAGTTTCATTTCCTaGTCGGGAAAGGATGGAATG +
Preference number: 4 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWISFIS*SGKDGM
Trigger: CATTCCATCCTTTCCCGATCAGGAAATGAAACTGAT...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp CACACTTCTGAAATGCTAAAGGCCTCCACCTCACTTCATGGAGGGGTGAAAAATTGCAAATACTCTGCTTaGACCAAAGTTGGACTTCAG +
Preference number: 4 (lower is better)
Translates to: HTSEMLKASTSLHGGVKNCKYSA*TKVGLQ
Trigger: CTGAAGTCCAACTTTGGTTCAAGCAGAGTATTTGCA...ATTTTTCACCCCTCCATGAAGTGAGGTGGAGGCCTTTAGCATTTCAGAAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCTGACATGCAGGATATaGTCAGCTCCTCCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPLTCRI*SAPPSK
Trigger: TTTGCTTGGAGGAGCTGATCATATCCTGCATGTCAG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR TCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTGGAAGACATCCTGCTaGGTCTCCCAGTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCWKTSC*VSQSNL
Trigger: GAGATTGGACTGGGAGACTCAGCAGGATGTCTTCCA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR GCA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCATGGCCACAAGTCTCTTaGGTCAGCAGAGAAACTGGC +
Preference number: 4 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTAWPQVS*VSRETG
Trigger: GCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCA...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTGGCCACAAGTCTCTTaGGTCAGCAGAGAAACTGGC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCWPQVS*VSRETG
Trigger: GCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000646273.1
CDS-3UTR GCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCCAACATCAGCTAAACTaGCCTTGCGCCGTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVQHQLN*PCAVQE
Trigger: CTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTG...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCAACATCAGCTAAACTaGCCTTGCGCCGTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCQHQLN*PCAVQE
Trigger: CTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGCAGCTAGTTTCTTCTaGTCATCGTGGGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCAASFF*SSWAAN
Trigger: GTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp CACACTTCTGAAATGCTAAAGGCCTCCACCTCACTTCATGGAGGGGTGAAAAATTGTAGAAGCTGCTGCTaGTGTCTTGCAATTTGTTCT +
Preference number: 4 (lower is better)
Translates to: HTSEMLKASTSLHGGVKNCRSCC*CLAICS
Trigger: AGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACA...ATTTTTCACCCCTCCATGAAGTGAGGTGGAGGCCTTTAGCATTTCAGAAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACTGCTGTAGAAGCTGCTaGTGCTGTCTTGCAATTTGT +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYCCRSC*CCLAIC
Trigger: ACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCA...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTATGCTGCGGCAGCAGCTaGCATGGTAGTTGGGATCAG +
Preference number: 4 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVCCGSS*HGSWDQ
Trigger: CTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCA...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGGGATCTGTGCTTGTTaGCCAACATTGAAGTACTGC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPGICAC*PTLKYC
Trigger: GCAGTACTTCAATGTTGGGCAACAAGCACAGATCCC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGGCAATGGGGATCTGTaGTTGTTGCCCAACATTGAA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPGNGDL*LLPNIE
Trigger: TTCAATGTTGGGCAACAAGCACAGATCCCCATTGCC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp TTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGGTTTATGAGAAAGTTAATGTaGTTGGCCACTGGTAAGGAT +
Preference number: 4 (lower is better)
Translates to: FLDQSLGRMWDFIPRCGFMRKLM*LATGKD
Trigger: ATCCTTACCAGTGGCCAAGCACATTAACTTTCTCAT...AAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp TTGAATTTATTTAACTGGGGAGGTGGAAGGGACTCTTATTCATTGTTGTGTGCCTCCTACCCAGTGCAGTaGCAGAATTCTCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LNLFNWGGGRDSYSLLCASYPVQ*QNSLFS
Trigger: GCTGAACAGAGAATTCTGGCACTGCACTGGGTAGGA...GGCACACAACAATGAATAAGAGTCCCTTCCACCTCCCCAGTTAAATAAATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCGAAGTGGGAGTCCTATaGCCACAAGTCTCTTGCGTC +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVEVGVL*PQVSCV
Trigger: GACGCAAGAGACTTGTGGCCATAGGACTCCCACTTC...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp TTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTCATGAAGTGGGAGTCCTATaGCCACAAGTCTCTTGCGTC +
Preference number: 4 (lower is better)
Translates to: FNGIYLELKQSILVAQTHEVGVL*PQVSCV
Trigger: GACGCAAGAGACTTGTGGCCATAGGACTCCCACTTC...ATGAGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGAAGTGGGAGTCCTATaGCCACAAGTCTCTTGCGTC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCEVGVL*PQVSCV
Trigger: GACGCAAGAGACTTGTGGCCATAGGACTCCCACTTC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000646273.1
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTATTGTGCTGAGAAGTaGGAGTCCTATGGCCACAAG +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPYCAEK*ESYGHK
Trigger: CTTGTGGCCATAGGACTCCCACTTCTCAGCACAATA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000646273.1
CDS-3UTR CCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTCGGAGGCTGGTCAGCTaGTTGATCATACCCATGAGT +
Preference number: 4 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKIRRLVS*LIIPMS
Trigger: ACTCATGGGTATGATCAACCAGCTGACCAGCCTCCG...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCGGAGGCTGGTCAGCTaGTTGATCATACCCATGAGT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCRRLVS*LIIPMS
Trigger: ACTCATGGGTATGATCAACCAGCTGACCAGCCTCCG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTTTCTTCTGCTCATCGTaGGCAGCCAACAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKIFFCSS*AANSCS
Trigger: AGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAA...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTTCTTCTGCTCATCGTaGGCAGCCAACAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCFFCSS*AANSCS
Trigger: AGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp TCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCACGGGTTCTTGTTGCTGCTTaGCCAGCTCCATTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: STNHNSSTCLFLSSLCPRVLVAA*PAPFAD
Trigger: GTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAAC...CCGTGGACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATTGCATTGCAGCTAGCTaGGCAGCATATAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNCIAAS*AAYNCC
Trigger: GCAGCAGTTATATGCTGCCCAGCTAGCTGCAATGCA...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGAGAGGCTGGTCGCTTaGAAGACATCCTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPERLVA*KTSFQT
Trigger: AGTTTGAAAGGATGTCTTCCAAGCGACCAGCCTCTC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
CDS-3UTR CCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACGGCATGAACTACATATaGCCCACACTTCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYGMNYI*PTLLKC
Trigger: GCATTTCAGAAGTGTGGGCCATATGTAGTTCATGCC...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp ACTCTTTTTAATTTAAAGTATTATAATGGCCTTGTAACTGAACTTCCTGCCCCCATGCCTCCTCCGGCGTaGGATGCAAAGTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: TLFNLKYYNGLVTELPAPMPPPA*DAKWHR
Trigger: TCTGTGCCACTTTGCATCCCACGCCGGAGGAGGCAT...GGGGGCAGGAAGTTCAGTTACAAGGCCATTATAATACTTTAAATTAAAAAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp CTGCCCCCAGCTGGAAACTCACTTTACTTGTTGAAGCCCACAATTTCTTCAAAGGTCGCTAACTCCTTGTaGGCAGGAACATATTTTTCA +
Preference number: 4 (lower is better)
Translates to: LPPAGNSLYLLKPTISSKVANSL*AGTYFS
Trigger: TGAAAAATATGTTCCTGCCCACAAGGAGTTAGCGAC...CTTTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGTTTCCAGCTGGGGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp CACACTTCTGAAATGCTAAAGGCCTCCACCTCACTTCATGGAGGGGTGAAAAATATTATTTCTCAGTGTTaGGGCAAGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HTSEMLKASTSLHGGVKNIISQC*GKCVCV
Trigger: CACACACACACACTTGCCCCAACACTGAGAAATAAT...ATTTTTCACCCCTCCATGAAGTGAGGTGGAGGCCTTTAGCATTTCAGAAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp TCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCACGGGAGAGGCTGGTCGCTTaGAAGACATCTCTGAAAACG +
Preference number: 4 (lower is better)
Translates to: STNHNSSTCLFLSSLCPRERLVA*KTSLKT
Trigger: CGTTTTCAGAGATGTCTTCCAAGCGACCAGCCTCTC...CCGTGGACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659413.1
3UTR CAA 72 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTaGGCTGGCAAAATCTACATAAGCAGTCCCATCACA +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWH*AGKIYISSPIT
Trigger: TGTGATGGGACTGCTTATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp TCATCGGTAAGTGTGTTAGAATTGATTTCAGCCATGAATGCCTTCAATGGCATCTCCATTGTATTGTGCTaGGAAGTGGGAGTCCTATGG +
Preference number: 4 (lower is better)
Translates to: SSVSVLELISAMNAFNGISIVLC*EVGVLW
Trigger: CCATAGGACTCCCACTTCTCAGCACAATACAATGGA...GATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACACTTACCGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR TCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACGTTGTGTGGGGCAAATaGAGACATAACTTTATTGCC +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYVVWGK*RHNFIA
Trigger: GGCAATAAAGTTATGTCTTCATTTGCCCCACACAAC...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp TCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCACGGCGCTGTTTCTCAATCTaGGAGGCAGCTAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: STNHNSSTCLFLSSLCPRRCFSI*EAASFF
Trigger: GAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCG...CCGTGGACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR TCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCTGTTCGGCAGTTATTaGGACCCAGACTATTCACAA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPLFGSY*DPDYSQ
Trigger: TTGTGAATAGTCTGGGTCTCAATAACTGCCGAACAG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451604.7
ENST00000537393.5
CDS-3UTR TCA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATATGATCGTCTCCAACTaGACCTGTCAAGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNMIVSN*TCQVSP
Trigger: TGGACTCACTTGACAGGTTCAGTTGGAGACGATCAT...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381381.6
CDS-3UTR TCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTATGGCCCACACTTCTaGAATGCTAAAGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCYGPHF*NAKGLH
Trigger: GTGGAGGCCTTTAGCATTTCAGAAGTGTGGGCCATA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTTATGGCCCACACTTCTaGAATGCTAAAGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKIYGPHF*NAKGLH
Trigger: GTGGAGGCCTTTAGCATTTCAGAAGTGTGGGCCATA...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTATTTGTTCTTGTTGCTaGTTGGCCAGCTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPICSCC*LASSIC
Trigger: GCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAAT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGCAATTTGTTCTTGTTaGTGCTTGGCCAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPAICSC*CLASSI
Trigger: AATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTGTTGCTGTAGAAGCTaGTGCTGCTGTCTTGCAATT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPCCCRS*CCCLAI
Trigger: AATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGTGGTGGGCTGTTTGTaGTCTTGTCTGTGTGAATGC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCVVGCL*SCLCEC
Trigger: GCATTCACACAGACAAGAGCACAAACAGCCCACCAC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCATTATGTGGGGTTCATTaGTACCACGCCCTCGGGATT +
Preference number: 4 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTALCGVH*YHALGI
Trigger: AATCCCGAGGGCGTGGTAGCAATGAACCCCACATAA...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTTATGTGGGGTTCATTaGTACCACGCCCTCGGGATT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCLCGVH*YHALGI
Trigger: AATCCCGAGGGCGTGGTAGCAATGAACCCCACATAA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATGGCAATGGGGATCTGTaGTTGTTGCCCAACATTGAA +
Preference number: 4 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNGNGDL*LLPNIE
Trigger: TTCAATGTTGGGCAACAAGCACAGATCCCCATTGCC...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTCCTACCCAGTGCAGTaGCAGAATTCTCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCSYPVQ*QNSLFS
Trigger: GCTGAACAGAGAATTCTGGCACTGCACTGGGTAGGA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCGTCTGCTTGTCACCATaGCTACCTCTCCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVVCLSP*LPLHLL
Trigger: AAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGAC...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGTCTGCTTGTCACCATaGCTACCTCTCCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCVCLSP*LPLHLL
Trigger: AAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGAC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp TCATCGGTAAGTGTGTTAGAATTGATTTCAGCCATGAATGCCTTCAATGGCATCCGTCAGCAGAGAAACTaGCTGAAATTCCTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SSVSVLELISAMNAFNGIRQQRN*LKFLRV
Trigger: CACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACG...GATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACACTTACCGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp GCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTGTAGTTTTTCAATACTaGGGGTTTCTTCCGGCTCGT +
Preference number: 4 (lower is better)
Translates to: AFNGIYLELKQSILVAQTVVFQY*GFLPAR
Trigger: ACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTAC...AGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGTTCTTGTTGCTGCTTaGCCAGCTCCATTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCVLVAA*PAPFAD
Trigger: GTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAAC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCGTTCTTGTTGCTGCTTaGCCAGCTCCATTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVVLVAA*PAPFAD
Trigger: GTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAAC...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTAGCTGCCATGGTAGTTaGGATCAGCTGAACAGGGTA +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCSCHGS*DQLNRV
Trigger: TACCCTGTTCAGCTGATCCCAACTACCATGGCAGCT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCTATAACTGCTGCAGTTaGAGTGGGCCTAAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVYNCCS*SGPKPG
Trigger: ACCAGGCTTAGGCCCACTCCAACTGCAGCAGTTATA...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTTGCATTGCAGCTAGCTaGGCAGCATATAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKICIAAS*AAYNCC
Trigger: GCAGCAGTTATATGCTGCCCAGCTAGCTGCAATGCA...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTGCATTGCAGCTAGCTaGGCAGCATATAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCCIAAS*AAYNCC
Trigger: GCAGCAGTTATATGCTGCCCAGCTAGCTGCAATGCA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCTTCATCCTTGCTTTTaGGTGGTGGGCTGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCLHPCF*VVGCLC
Trigger: GCACAAACAGCCCACCACCCAAAAGCAAGGATGAAG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451604.7
ENST00000537393.5
CDS-3UTR CCA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTACCCATACGGAGAGGCTaGTCGCTTGGAAGACATCCT +
Preference number: 4 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVPIRRG*SLGRHP
Trigger: AGGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGG...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGAATCTCACCAGCTGCTaGTATTTCAGGTTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWNLTSC*YFRFFK
Trigger: CTTGAAAAACCTGAAATACCAGCAGCTGGTGAGATT...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp TTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGGTTTTCTGAGCCCTATACTTaGTTAAGTTGTCATTTGAAG +
Preference number: 4 (lower is better)
Translates to: FLDQSLGRMWDFIPRCGFSEPYT*LSCHLK
Trigger: CTTCAAATGACAACTTAACCAAGTATAGGGCTCAGA...AAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCTCCACCTCACTTCATaGAGGGGTGAAAAATACCTT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPLHLTS*RGEKYL
Trigger: AAGGTATTTTTCACCCCTCCATGAAGTGAGGTGGAG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGAAAGTTGGACTTCAGTaGATTAATCTGACAGCAAGG +
Preference number: 4 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWKVGLQ*INLTAR
Trigger: CCTTGCTGTCAGATTAATCCACTGAAGTCCAACTTT...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGCCCTACAACTGCCTTaGCATTTGGCTGGCAAAATC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCALQLP*HLAGKI
Trigger: GATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp TTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTTATTCCTTGGAGGAGACTGGAGATaGGTTTTGGTGGCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: FAYSKNSTNHNSSTCLFLGGDWR*VLVARL
Trigger: AAGGCGAGCCACCAAAACCCATCTCCAGTCTCCTCC...AAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTAGCACCTGCCACATTTaGGGAGGCTTGTCCAAAACT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCSTCHI*GGLSKT
Trigger: AGTTTTGGACAAGCCTCCCCAAATGTGGCAGGTGCT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CCA 90 bp ACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCACGGTCATTACCTTCCTGCCCCCAGCTaGAAACTCACTTTACTTGTT +
Preference number: 4 (lower is better)
Translates to: TITLPPVYSFHLFVHGHYLPAPS*KLTLLV
Trigger: AACAAGTAAAGTGAGTTTCCAGCTGGGGGCAGGAAG...GTAATGACCGTGGACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659413.1
3UTR CAA 72 bp GATTTTGCATTTATTTGTACAGGCCCTACAACTGCCTaGGCATTTGGCTGGCAAAATCTACATAAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: DFAFICTGPTTA*AFGWQNLHKQS
Trigger: GGACTGCTTATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATGCAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTCCATTGTATTGTGCTaGGAAGTGGGAGTCCTATGG +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCSIVLC*EVGVLW
Trigger: CCATAGGACTCCCACTTCTCAGCACAATACAATGGA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000646273.1
CDS-3UTR TCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGTTGTGTGGGGCAAATaGAGACATAACTTTATTGCC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPVVWGK*RHNFIA
Trigger: GGCAATAAAGTTATGTCTTCATTTGCCCCACACAAC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR TCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTCGCTGTTTCTCAATCTaGGAGGCAGCTAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKIRCFSI*EAASFF
Trigger: GAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCG...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCGCTGTTTCTCAATCTaGGAGGCAGCTAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCRCFSI*EAASFF
Trigger: GAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR TCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACGTTGCTGGAGCAAATTaGTTTTGTGTTGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYVAGAN*FCVVAV
Trigger: TACAGCAACAACACAAAATCAATTTGCTCCAGCAAC...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTATCCTTTCAAACTCCTaGGGTAAATCAGGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPILSNS*GKSGSV
Trigger: TACTGACCCTGATTTACCTCAGGAGTTTGAAAGGAT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
CDS-3UTR TCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTTAACTGCCAGTTGCTaGGTCAGACTCTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCLTASC*VRLSSV
Trigger: AACACTGGAGAGTCTGACTCAGCAACTGGCAGTTAA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR TCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCTACTTTTTATGGCATaGACTACATATGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPLLFMA*TTYGPH
Trigger: GTGTGGGCCATATGTAGTTCATGCCATAAAAAGTAG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATTGCAAATACTCTGCTTaGACCAAAGTTGGACTTCAG +
Preference number: 4 (lower is better)
Translates to: FICTGPTTALAFGWQNLHCKYSA*TKVGLQ
Trigger: CTGAAGTCCAACTTTGGTTCAAGCAGAGTATTTGCA...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTAGCAAACGTGAGAGGTaGACCCACATAAATCGGAAG +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCSKRER*THINRK
Trigger: CTTCCGATTTATGTGGGTTCACCTCTCACGTTTGCT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR TCA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATCAGAATGCAGCGGTATaGACTTGCTTTTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNQNAAV*TCFLFR
Trigger: CCGAAACAAAAAGCAAGTTCATACCGCTGCATTCTG...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR TCA 90 bp CACACTTCTGAAATGCTAAAGGCCTCCACCTCACTTCATGGAGGGGTGAAAAATAAATTTGATGTCCAGTaGATTAACCGTCAGAACAAG +
Preference number: 4 (lower is better)
Translates to: HTSEMLKASTSLHGGVKNKFDVQ*INRQNK
Trigger: CTTGTTCTGACGGTTAATTCACTGGACATCAAATTT...ATTTTTCACCCCTCCATGAAGTGAGGTGGAGGCCTTTAGCATTTCAGAAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR TCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACGCACCTTTTATCAAGTaGCTTCAAAGCACTTTCAAC +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYAPFIK*LQSTFN
Trigger: GTTGAAAGTGCTTTGAAGTCACTTGATAAAAGGTGC...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp TTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTTATTCCTTGCAGCTAGTTTCTTCTaGTCATCGTGGGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: FAYSKNSTNHNSSTCLFLAASFF*SSWAAN
Trigger: GTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGC...AAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR GCA 90 bp TTCAGCCATGAATGCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTATTTGTTCTTGTTGCTaGTTGGCCAGCTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: FSHECLQWHLPGAKTKYSICSCC*LASSIC
Trigger: GCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAAT...AGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGCATTCATGGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp TCATCGGTAAGTGTGTTAGAATTGATTTCAGCCATGAATGCCTTCAATGGCATCCTGCTGCTGCTGTCTTaGAATTTGTTCTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSVSVLELISAMNAFNGILLLLS*NLFLLL
Trigger: CAGCAACAAGAACAAATTGCAAGACAGCAGCAGCAG...GATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACACTTACCGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTGTAGAAGCTGCTGCTaGTGTCTTGCAATTTGTTCT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPCRSCC*CLAICS
Trigger: AGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp TCATCGGTAAGTGTGTTAGAATTGATTTCAGCCATGAATGCCTTCAATGGCATCTGTTGCTGTAGAAGCTaGTGCTGCTGTCTTGCAATT +
Preference number: 4 (lower is better)
Translates to: SSVSVLELISAMNAFNGICCCRS*CCCLAI
Trigger: AATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACA...GATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACACTTACCGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTTGATTTTGTGTTGTTaGTGTAGAAGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPLILCC*CRSCCC
Trigger: GCAGCAGCAGCTTCTACAGCAACAACACAAAATCAA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCAGGGATCTGTGCTTGTTaGCCAACATTGAAGTACTGC +
Preference number: 4 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTAGICAC*PTLKYC
Trigger: GCAGTACTTCAATGTTGGGCAACAAGCACAGATCCC...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGGGATCTGTGCTTGTTaGCCAACATTGAAGTACTGC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCGICAC*PTLKYC
Trigger: GCAGTACTTCAATGTTGGGCAACAAGCACAGATCCC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCAGGCAATGGGGATCTGTaGTTGTTGCCCAACATTGAA +
Preference number: 4 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTAGNGDL*LLPNIE
Trigger: TTCAATGTTGGGCAACAAGCACAGATCCCCATTGCC...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGGCAATGGGGATCTGTaGTTGTTGCCCAACATTGAA +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCGNGDL*LLPNIE
Trigger: TTCAATGTTGGGCAACAAGCACAGATCCCCATTGCC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp TTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGGTTTAGTTGTCATTTGAAGTaGAAAGTCAAGGTCAAGATT +
Preference number: 4 (lower is better)
Translates to: FLDQSLGRMWDFIPRCGFSCHLK*KVKVKI
Trigger: AATCTTGACCTTGACTTTGCACTTCAAATGACAACT...AAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp CTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCACCTACAGTTTCCATTAAAGATTTCAGCCATGAATaGCTTCAATGGCATCTACCT +
Preference number: 4 (lower is better)
Translates to: LSLSLSFHLRTAPTVSIKDFSHE*LQWHLP
Trigger: AGGTAGATGCCATTGAAGGCATTCATGGCTGAAATC...TTTAATGGAAACTGTAGGTGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp TTGAATTTATTTAACTGGGGAGGTGGAAGGGACTCTTATTCATTGTTGTGTGCCCTTTTTCCTACCCAGTaGAGTGCCAGAATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LNLFNWGGGRDSYSLLCALFPTQ*SARILC
Trigger: ACAGAGAATTCTGGCACTGCACTGGGTAGGAAAAAG...GGCACACAACAATGAATAAGAGTCCCTTCCACCTCCCCAGTTAAATAAATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCAGAGTGAGGCTTGTTaGGAAAACTCACATGCAAGG +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCQSEAC*ENSHAR
Trigger: CCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000646273.1
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCGTCAGCAGAGAAACTaGCTGAAATTCCTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCRQQRN*LKFLRV
Trigger: CACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000646273.1
CDS-3UTR CCA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTACGGAGGCTGGTCAGCTaGTTGATCATACCCATGAGT +
Preference number: 4 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVRRLVS*LIIPMS
Trigger: ACTCATGGGTATGATCAACCAGCTGACCAGCCTCCG...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp ACTCTTTTTAATTTAAAGTATTATAATGGCCTTGTAACTGAACTTCCTGCCCCCTTCTTCTGCTCATCGTaGGCAGCCAACAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TLFNLKYYNGLVTELPAPFFCSS*AANSCS
Trigger: AGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAA...GGGGGCAGGAAGTTCAGTTACAAGGCCATTATAATACTTTAAATTAAAAAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATCTCCACCTCACTTCATaGAGGGGTGAAAAATACCTT +
Preference number: 4 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNLHLTS*RGEKYL
Trigger: AAGGTATTTTTCACCCCTCCATGAAGTGAGGTGGAG...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATGGCATGAACTACATATaGCCCACACTTCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNGMNYI*PTLLKC
Trigger: GCATTTCAGAAGTGTGGGCCATATGTAGTTCATGCC...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp TTCAGCCATGAATGCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTGCCTTGGCATTTGGCTaGCAAAATCTACATAAGCAG +
Preference number: 4 (lower is better)
Translates to: FSHECLQWHLPGAKTKYSALAFG*QNLHKQ
Trigger: CTGCTTATGTAGATTTTGCCAGCCAAATGCCAAGGC...AGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGCATTCATGGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACTGGAGATGGGTTTTaGTGGCTCGCCTTTTTCACT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCTGDGF*WLAFFT
Trigger: AGTGAAAAAGGCGAGCCACCAAAACCCATCTCCAGT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGTCGCTAACTCCTTGTaGGCAGGAACATATTTTTCA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPVANSL*AGTYFS
Trigger: TGAAAAATATGTTCCTGCCCACAAGGAGTTAGCGAC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR TCA 90 bp ACTCTTTTTAATTTAAAGTATTATAATGGCCTTGTAACTGAACTTCCTGCCCCCCCTTCTTCTGCCTTCTaGGGTGAGGTAGATGAGTTG +
Preference number: 4 (lower is better)
Translates to: TLFNLKYYNGLVTELPAPPSSAF*GEVDEL
Trigger: CAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGG...GGGGGCAGGAAGTTCAGTTACAAGGCCATTATAATACTTTAAATTAAAAAGAGT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR TCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGTTGCTGGAGCAAATTaGTTTTGTGTTGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPVAGAN*FCVVAV
Trigger: TACAGCAACAACACAAAATCAATTTGCTCCAGCAAC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR TCA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCACTGTTCGGCAGTTATTaGGACCCAGACTATTCACAA +
Preference number: 4 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTALFGSY*DPDYSQ
Trigger: TTGTGAATAGTCTGGGTCTCAATAACTGCCGAACAG...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR TCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCCTCTCTCTTTTCACCTaGGAACAGCACCTACAGTTT +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVLSLFT*EQHLQF
Trigger: AAACTGTAGGTGCTGTTCTCAGGTGAAAAGAGAGAG...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCTCTCTCTTTTCACCTaGGAACAGCACCTACAGTTT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCLSLFT*EQHLQF
Trigger: AAACTGTAGGTGCTGTTCTCAGGTGAAAAGAGAGAG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATCTACTTTTTATGGCATaGACTACATATGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNLLFMA*TTYGPH
Trigger: GTGTGGGCCATATGTAGTTCATGCCATAAAAAGTAG...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTAGACAAAGGGATACCTaGACCACTTTAAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKIRQRDT*TTLSGL
Trigger: AAGGCCACTTAAAGTGGTTCAGGTATCCCTTTGTCT...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR TCA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTAGTTTTAGTGAACCAGTaGCGGAAACACTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVVLVNQ*RKHWGG
Trigger: TCCTCCCCAGTGTTTCCGTCACTGGTTCACTAAAAC...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR TCA 90 bp TTGAATTTATTTAACTGGGGAGGTGGAAGGGACTCTTATTCATTGTTGTGTGCCAAAATCTTTATCTGCTaGGTCTCCCAGTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: LNLFNWGGGRDSYSLLCAKIFIC*VSQSNL
Trigger: GAGATTGGACTGGGAGACTCAGCAGATAAAGATTTT...GGCACACAACAATGAATAAGAGTCCCTTCCACCTCCCCAGTTAAATAAATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR TCA 90 bp TTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTTATTCCTTGTGTGCCTAGGACAGTaGCCTATAAGTAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: FAYSKNSTNHNSSTCLFLVCLGQ*PISSRQ
Trigger: TTGCCTGCTACTTATAGGTCACTGTCCTAGGCACAC...AAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTATCATACCCATGAGTTaGCTTTCTTTCTCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPIIPMS*LSFSAK
Trigger: CTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGAT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCATTTGTTCTTGTTGCTaGTTGGCCAGCTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVICSCC*LASSIC
Trigger: GCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAAT...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCTGCTGCTGCTGTCTTaGAATTTGTTCTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCLLLLS*NLFLLL
Trigger: CAGCAACAAGAACAAATTGCAAGACAGCAGCAGCAG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCATGCTGTAGAAGCTGCTaGTGCTGTCTTGCAATTTGT +
Preference number: 4 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTACCRSC*CCLAIC
Trigger: ACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCA...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTGCTGTAGAAGCTGCTaGTGCTGTCTTGCAATTTGT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCCCRSC*CCLAIC
Trigger: ACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTGTTGCTGTAGAAGCTaGTGCTGCTGTCTTGCAATT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCCCCRS*CCCLAI
Trigger: AATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCTTTTTCCTACCCAGTaGAGTGCCAGAATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCLFPTQ*SARILC
Trigger: ACAGAGAATTCTGGCACTGCACTGGGTAGGAAAAAG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR GCA 90 bp TCCCTTTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTTATACTTGTTCTTGTTGCTaGTTGGCCAGCTCCATTTGC +
Preference number: 4 (lower is better)
Translates to: SLLPTQRILLTITLPPVYTCSCC*LASSIC
Trigger: GCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAGT...ATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAAAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp ACTCTTTTTAATTTAAAGTATTATAATGGCCTTGTAACTGAACTTCCTGCCCCCGTCTGCTTGTCACCATaGCTACCTCTCCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: TLFNLKYYNGLVTELPAPVCLSP*LPLHLL
Trigger: AAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGAC...GGGGGCAGGAAGTTCAGTTACAAGGCCATTATAATACTTTAAATTAAAAAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGTAGTTTTTCAATACTaGGGGTTTCTTCCGGCTCGT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCVVFQY*GFLPAR
Trigger: ACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTAC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CCA 90 bp CTTTCCCTTTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTGTAGTTTTTCAATACTaGGGGTTTCTTCCGGCTCGT +
Preference number: 4 (lower is better)
Translates to: LSLLPTQRILLTITLPPVVVFQY*GFLPAR
Trigger: ACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTAC...AACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAAAGGGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATAATCTCACCAGCTGCTaGTATTTCAGGTTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: FICTGPTTALAFGWQNLHNLTSC*YFRFFK
Trigger: CTTGAAAAACCTGAAATACCAGCAGCTGGTGAGATT...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACGGGTTTAACTCACAATaGTCCAACGTTATTCCTATT +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYGFNSQ*SNVIPI
Trigger: AATAGGAATAACGTTGGACCATTGTGAGTTAAACCC...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTCTAGACCAGTCACTTaGGAGGATGTGGGATTTCAT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCSRPVT*EDVGFH
Trigger: ATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCTCTAGACCAGTCACTTaGGAGGATGTGGGATTTCAT +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVSRPVT*EDVGFH
Trigger: ATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGA...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATAAAGTTGGACTTCAGTaGATTAATCTGACAGCAAGG +
Preference number: 4 (lower is better)
Translates to: FICTGPTTALAFGWQNLHKVGLQ*INLTAR
Trigger: CCTTGCTGTCAGATTAATCCACTGAAGTCCAACTTT...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp TTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTTATTCCTTGGAGATGGGTTTTGGTaGCTCGCCTTTTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: FAYSKNSTNHNSSTCLFLGDGFW*LAFFTL
Trigger: CAGAGTGAAAAAGGCGAGCCACCAAAACCCATCTCC...AAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp TTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTTATTCCTTGATCCTCCTGAAGTATaGCTCTACACCTTGGACCGT +
Preference number: 4 (lower is better)
Translates to: FAYSKNSTNHNSSTCLFLDPPEV*LYTLDR
Trigger: ACGGTCCAAGGTGTAGAGCCATACTTCAGGAGGATC...AAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp TTGAATTTATTTAACTGGGGAGGTGGAAGGGACTCTTATTCATTGTTGTGTGCCATTTTTCATCATCTTTaGGTCACCAATGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LNLFNWGGGRDSYSLLCAIFHHL*VTNGQH
Trigger: GTGCTGGCCATTGGTGACCCAAAGATGATGAAAAAT...GGCACACAACAATGAATAAGAGTCCCTTCCACCTCCCCAGTTAAATAAATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR TCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGTTGTGTGGGGCAAATaGAGACATAACTTTATTGCC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCVVWGK*RHNFIA
Trigger: GGCAATAAAGTTATGTCTTCATTTGCCCCACACAAC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR TCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTATCCTTTCAAACTCCTaGGGTAAATCAGGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCILSNS*GKSGSV
Trigger: TACTGACCCTGATTTACCTCAGGAGTTTGAAAGGAT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
CDS-3UTR TCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCATCAGTTTCATTTCCTaGTCGGGAAAGGATGGAATG +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVISFIS*SGKDGM
Trigger: CATTCCATCCTTTCCCGATCAGGAAATGAAACTGAT...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp AGAATTCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCTTGGAAGACATCTCTaGAAACGGCACTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: RILLTITLPPVYSFHLFVLGRHL*KRHSCV
Trigger: AACACAGGAGTGCCGTTTTCAGAGATGTCTTCCAAG...GACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR GCA 90 bp TTCAGCCATGAATGCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTATCATACCCATGAGTTaGCTTTCTTTCTCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: FSHECLQWHLPGAKTKYSIIPMS*LSFSAK
Trigger: CTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGAT...AGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGCATTCATGGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTGTAGAAGCTGCTGCTaGTGTCTTGCAATTTGTTCT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCCRSCC*CLAICS
Trigger: AGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTTGATTTTGTGTTGTTaGTGTAGAAGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCLILCC*CRSCCC
Trigger: GCAGCAGCAGCTTCTACAGCAACAACACAAAATCAA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTCTTTGCAAATACTCTaGTTGAACCAAAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPSLQIL*LNQSWT
Trigger: AGTCCAACTTTGGTTCAAGCAGAGTATTTGCAAAGA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp CTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCACCTACAGTTTCCATTAAAATCACATTCAGTTGTTaGTCTTTGCAAATACTCTGC +
Preference number: 4 (lower is better)
Translates to: LSLSLSFHLRTAPTVSIKITFSC*SLQILC
Trigger: GCAGAGTATTTGCAAAGAGCAACAACTGAATGTGAT...TTTAATGGAAACTGTAGGTGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp TTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTTATTCCTTCTCACTTGTTCTTGTTaGTGCTTGGCCAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: FAYSKNSTNHNSSTCLFLLTCSC*CLASSI
Trigger: AATGGAGCTGGCCAAGCAGCAACAAGAACAAGTGAG...AAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR GCA 90 bp TTGAATTTATTTAACTGGGGAGGTGGAAGGGACTCTTATTCATTGTTGTGTGCCTCTGAGGAATATGACTaGATCGCTAGTTCTTACTCA +
Preference number: 4 (lower is better)
Translates to: LNLFNWGGGRDSYSLLCASEEYD*IASSYS
Trigger: TGAGTAAGAACTAGCGATGCAGTCATATTCCTCAGA...GGCACACAACAATGAATAAGAGTCCCTTCCACCTCCCCAGTTAAATAAATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCTCAAAGATGTAGTGTaGTGTGCAATAGATAAAGTC +
Preference number: 4 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPLKDVV*CAIDKV
Trigger: GACTTTATCTATTGCACACCACACTACATCTTTGAG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp ACTCTTTTTAATTTAAAGTATTATAATGGCCTTGTAACTGAACTTCCTGCCCCCACTGGAGATGGGTTTTaGTGGCTCGCCTTTTTCACT +
Preference number: 4 (lower is better)
Translates to: TLFNLKYYNGLVTELPAPTGDGF*WLAFFT
Trigger: AGTGAAAAAGGCGAGCCACCAAAACCCATCTCCAGT...GGGGGCAGGAAGTTCAGTTACAAGGCCATTATAATACTTTAAATTAAAAAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTATTTTTCATCATCTTTaGGTCACCAATGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCIFHHL*VTNGQH
Trigger: GTGCTGGCCATTGGTGACCCAAAGATGATGAAAAAT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CCA 90 bp GCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTTATCTAACAGCTTATTaGCTGCACTTCCAAATCAGA +
Preference number: 4 (lower is better)
Translates to: AFNGIYLELKQSILVAQTYLTAY*LHFQIR
Trigger: TCTGATTTGGAAGTGCAGCCAATAAGCTGTTAGATA...AGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACGCATCTTTCATAACATaGTGTAAAGTAAGTATCCAG +
Preference number: 4 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYASFIT*CKVSIQ
Trigger: CTGGATACTTACTTTACACCATGTTATGAAAGATGC...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCATAAGAGGTTTCTTCTaGGAACAGTCACAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVIRGFF*EQSQLL
Trigger: CAGAAGCTGTGACTGTTCCCAGAAGAAACCTCTTAT...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp TTCAGCCATGAATGCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTAATACTGTAAAAGCCTaGCTAAACCAACAGCTATGC +
Preference number: 4 (lower is better)
Translates to: FSHECLQWHLPGAKTKYSNTVKA*LNQQLC
Trigger: GCATAGCTGTTGGTTTAGCCAGGCTTTTACAGTATT...AGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGCATTCATGGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp TTCAGCCATGAATGCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTACATCGTCTTCAACCTaGGAAGTTGATAGTTATAGG +
Preference number: 4 (lower is better)
Translates to: FSHECLQWHLPGAKTKYSTSSST*EVDSYR
Trigger: CCTATAACTATCAACTTCCCAGGTTGAAGACGATGT...AGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGCATTCATGGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR CAA 72 bp TGGCAAAATCTACATAAGCAGTCCCATCACATTCAGTaGTTGCTCTTTGCAAATACTCTGCTTGAACCAAAG +
Preference number: 4 (lower is better)
Translates to: WQNLHKQSHHIQ*LLFANTLLEPK
Trigger: CTTTGGTTCAAGCAGAGTATTTGCAAAGAGCAACAACTGAATGTGATGGGACTGCTTATGTAGATTTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp TTCAGCCATGAATGCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTCATaGAATGAAAACAAAGCATCT +
Preference number: 4 (lower is better)
Translates to: FSHECLQWHLPGAKTKYSCSPNS*NENKAS
Trigger: AGATGCTTTGTTTTCATTTCATGAGTTTGGGCTACA...AGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGCATTCATGGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCAATCATACCCATGAGTTaGCTTTCTTTCTCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTAIIPMS*LSFSAK
Trigger: CTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGAT...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTATCATACCCATGAGTTaGCTTTCTTTCTCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCIIPMS*LSFSAK
Trigger: CTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGAT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR GCA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTAGCAATTTGTTCTTGTTaGTGCTTGGCCAGCTCCATT +
Preference number: 4 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVAICSC*CLASSI
Trigger: AATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGC...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTATGTTGCTGTAGAAGCTaGTGCTGCTGTCTTGCAATT +
Preference number: 4 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVCCCRS*CCCLAI
Trigger: AATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACA...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTCAAATCTCACCAGCTaGTGGTATTTCAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCSNLTS*WYFRFF
Trigger: GAAAAACCTGAAATACCAGCAGCTGGTGAGATTTGA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTTCAAATCTCACCAGCTaGTGGTATTTCAGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKISNLTS*WYFRFF
Trigger: GAAAAACCTGAAATACCAGCAGCTGGTGAGATTTGA...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTCTTCCATGTTATACATaGACACCTCTATTACACAGG +
Preference number: 4 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKILPCYT*TPLLHR
Trigger: CCTGTGTAATAGAGGTGTGCATGTATAACATGGAAG...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCTTCCATGTTATACATaGACACCTCTATTACACAGG +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCLPCYT*TPLLHR
Trigger: CCTGTGTAATAGAGGTGTGCATGTATAACATGGAAG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCAAACAAGAGAACAGAATaGAGCGGTATGAACTTGCTT +
Preference number: 4 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTANKRTE*SGMNLL
Trigger: AAGCAAGTTCATACCGCTGCATTCTGTTCTCTTGTT...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATTCTGAGCCCTATACTTaGTTAAGTTGTCATTTGAAG +
Preference number: 4 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNSEPYT*LSCHLK
Trigger: CTTCAAATGACAACTTAACCAAGTATAGGGCTCAGA...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATAAATCCTACTTTTTATaGCATGAACTACATATGGCC +
Preference number: 4 (lower is better)
Translates to: FICTGPTTALAFGWQNLHKSYFL*HELHMA
Trigger: GGCCATATGTAGTTCATGCCATAAAAAGTAGGATTT...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTAGCCTTGGCATTTGGCTaGCAAAATCTACATAAGCAG +
Preference number: 4 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVALAFG*QNLHKQ
Trigger: CTGCTTATGTAGATTTTGCCAGCCAAATGCCAAGGC...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATCATAACTTACTAATCTaGGAACAGCTGACCATTATT +
Preference number: 4 (lower is better)
Translates to: FICTGPTTALAFGWQNLHHNLLI*EQLTII
Trigger: AATAATGGTCAGCTGTTCCCAGATTAGTAAGTTATG...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR CAA 72 bp CAAAATCTACATAAGCAGTCCCATCACATTCAGTTGTaGCTCTTTGCAAATACTCTGCTTGAACCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: QNLHKQSHHIQL*LFANTLLEPKL
Trigger: CAACTTTGGTTCAAGCAGAGTATTTGCAAAGAGCAACAACTGAATGTGATGGGACTGCTTATGTAGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
3UTR CAA 72 bp CAAAGTGTTGTCAATTCATCGGTAAGTGTGTTAGAATaGATTTCAGCCATGAATGCCTTCAATGGCATCTAC +
Preference number: 4 (lower is better)
Translates to: QSVVNSSVSVLE*ISAMNAFNGIY
Trigger: GTAGATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACACTTACCGATGAATTGACAACACTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCTCTTTGCAAATACTCTaGTTGAACCAAAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVSLQIL*LNQSWT
Trigger: AGTCCAACTTTGGTTCAAGCAGAGTATTTGCAAAGA...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCAATCACATTCAGTTGTTaGTCTTTGCAAATACTCTGC +
Preference number: 4 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTAITFSC*SLQILC
Trigger: GCAGAGTATTTGCAAAGAGCAACAACTGAATGTGAT...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTTGGTTAACTCTTAACTaGAGATGCCAAATGAACTTC +
Preference number: 4 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKIWLTLN*RCQMNF
Trigger: GAAGTTCATTTGGCATCTGCAGTTAAGAGTTAACCA...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAGTGAGATGGTAGGTTaGACATACTTTGTTTTAAGC +
Preference number: 4 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVSEMVG*TYFVLS
Trigger: GCTTAAAACAAAGTATGTGCAACCTACCATCTCACT...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp TTGAATTTATTTAACTGGGGAGGTGGAAGGGACTCTTATTCATTGTTGTGTGCCATCTATTTCTTGAAATaGTTTTTCCTACCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LNLFNWGGGRDSYSLLCAIYFLK*FFLPSA
Trigger: TGCACTGGGTAGGAAAAAGCATTTCAAGAAATAGAT...GGCACACAACAATGAATAAGAGTCCCTTCCACCTCCCCAGTTAAATAAATTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CCA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTCTCAAAGATGTAGTGTaGTGTGCAATAGATAAAGTC +
Preference number: 4 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKILKDVV*CAIDKV
Trigger: GACTTTATCTATTGCACACCACACTACATCTTTGAG...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATACTTCAGTACAAATTTaGCACTTGCTCAAAGATGTA +
Preference number: 4 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNTSVQI*HLLKDV
Trigger: TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGT...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp TCATCGGTAAGTGTGTTAGAATTGATTTCAGCCATGAATGCCTTCAATGGCATCAAATCCTACTTTTTATaGCATGAACTACATATGGCC +
Preference number: 4 (lower is better)
Translates to: SSVSVLELISAMNAFNGIKSYFL*HELHMA
Trigger: GGCCATATGTAGTTCATGCCATAAAAAGTAGGATTT...GATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACACTTACCGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CCA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCACAGGCTCCATTTTATTaGGCTGCAATGACTTTTAAT +
Preference number: 4 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTAQAPFY*AAMTFN
Trigger: ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTG...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCAGGCTCCATTTTATTaGGCTGCAATGACTTTTAAT +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCQAPFY*AAMTFN
Trigger: ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CCA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATGATGATTATGTTCTTTaGGAGGGATTTTATACATGG +
Preference number: 4 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNDDYVL*EGFYTW
Trigger: CCATGTATAAAATCCCTCCCAAAGAACATAATCATC...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
3UTR CAA 72 bp ATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTaGCTCAAAGATGTAGTGTGGTGTGCAATAGATAAA +
Preference number: 4 (lower is better)
Translates to: MNLVNTSVQIWH*LKDVVWCAIDK
Trigger: TTTATCTATTGCACACCACACTACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR GCA 90 bp TTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTTATTCCTTATCATACCCATGAGTTaGCTTTCTTTCTCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: FAYSKNSTNHNSSTCLFLIIPMS*LSFSAK
Trigger: CTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGAT...AAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR GCA 90 bp TTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTCATAGTTGTCATTTGAAGTaGAAAGTCAAGGTCAAGATT +
Preference number: 4 (lower is better)
Translates to: FNGIYLELKQSILVAQTHSCHLK*KVKVKI
Trigger: AATCTTGACCTTGACTTTGCACTTCAAATGACAACT...ATGAGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTTTTTATTGGTGCCTTaGATGGCAGTAATACTGAAA +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCFLLVP*MAVILK
Trigger: TTTCAGTATTACTGCCATGCAAGGCACCAATAAAAA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR GCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTATCTATTTCTTGAAATaGTTTTTCCTACCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCIYFLK*FFLPSA
Trigger: TGCACTGGGTAGGAAAAAGCATTTCAAGAAATAGAT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CCA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACTTCAGTACAAATTTaGCACTTGCTCAAAGATGTA +
Preference number: 4 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCTSVQI*HLLKDV
Trigger: TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR TCA 90 bp AGAATTCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCACTCACTTTACTTGTTaGAGCCCACAATTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: RILLTITLPPVYSFHLFVTHFTC*SPQFLQ
Trigger: TTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGT...GACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS CCA 90 bp GCACAGCACGCACCTTACCCGGTCTCGTTAATGCCTCCTCCGGCGTaGGATGCAAAGTGGCACAGAGGCGGGCTGGGGGCCCCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: AQHAPYPVSLMPPPA*DAKWHRGGLGAPGR
Trigger: CCTCCCGGGGGCCCCCAGCCCGCCTCTGTGCCACTTTGCATCCCACGCCGGAGGAGGCATTAACGAGACCGGGTAAGGTGCGTGCTGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446891.7
CDS GCA 90 bp GCACGCACCTTACCCGGTCTCGTTAATGCCTCCTCCGGCGTGGGATaGAAAGTGGCACAGAGGCGGGCTGGGGGCCCCCGGGAGGAGACT +
Preference number: 5 (lower is better)
Translates to: ARTLPGLVNASSGVG*KVAQRRAGGPREET
Trigger: AGTCTCCTCCCGGGGGCCCCCAGCCCGCCTCTGTGCCACTTTGCATCCCACGCCGGAGGAGGCATTAACGAGACCGGGTAAGGTGCGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446891.7
CDS CCA 90 bp GGTTGTAAGAATGCAGCACCGGTCTCGTTAATGCCTCCTCCGGCGTaGGATGCAAAGTGGCACAGAGGCGGGCTGGGGGCCCCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: GCKNAAPVSLMPPPA*DAKWHRGGLGAPGR
Trigger: CCTCCCGGGGGCCCCCAGCCCGCCTCTGTGCCACTTTGCATCCCACGCCGGAGGAGGCATTAACGAGACCGGTGCTGCATTCTTACAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000429944.6
ENST00000456299.2
CDS-3UTR CAA 90 bp TTTCTCAGTGTTGGGGCAAGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGCCAATGCGCAGCTTTTaGCCATCCACCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: FLSVGASVCVCVCARARAPMRSF*PSTRQV
Trigger: CACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTGG...CGCGCGCGCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS GCA 90 bp TGGTCGCTTGGAAGACATCACAGACATGCATGCAGAGATGGTGGCTaGCCCGTGCACCGCAGCATCTGGTCAGGGAGTAAGCACACACTT +
Preference number: 5 (lower is better)
Translates to: WSLGRHHRHACRDGG*PVHRSIWSGSKHTL
Trigger: AAGTGTGTGCTTACTCCCTGACCAGATGCTGCGGTGCACGGGGCAGCCACCATCTCTGCATGCATGTCTGTGATGTCTTCCAAGCGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545921.5
CDS-3UTR CAA 90 bp TTTCTCAGTGTTGGGGCAAGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGAAGCACAATTTCCCTTaGTCACAGCAGCCACCTATG +
Preference number: 5 (lower is better)
Translates to: FLSVGASVCVCVCARARAKHNFP*SQQPPM
Trigger: CATAGGTGGCTGCTGTGACAAAGGGAAATTGTGCTT...CGCGCGCGCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS GCA 90 bp AGGTTGCCTTGGGGTATGCCTGGCAGCTTCCCTCCTGGAGATACCTaGATTGCAGCTAGCTGGGCAGCATATAACTGCTGCAGTTGGAGT +
Preference number: 5 (lower is better)
Translates to: RLPWGMPGSFPPGDT*IAASWAAYNCCSWS
Trigger: ACTCCAACTGCAGCAGTTATATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000535530.5
ENST00000536629.5
ENST00000536911.1
ENST00000537393.5
ENST00000545921.5
ENST00000646273.1
CDS GCA 90 bp AGGTTGCCTTGGGGTATGCCTGGCAGCTTCCCTCCTGGAGATACCTaGATTGCAGCTAGCTGGGCAGCATATAACTGTCTTGCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: RLPWGMPGSFPPGDT*IAASWAAYNCLAAV
Trigger: CACAGCTGCAAGACAGTTATATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542241.5
CDS GCA 90 bp TTGGAAGACATCACAGACATGCATGCAGAGATGGTGGCTGCCCCGTaGACCGCAGCATCTGGTCAGGGAGTAAGCACACACTTACCAACA +
Preference number: 5 (lower is better)
Translates to: LEDITDMHAEMVAAP*TAASGQGVSTHLPT
Trigger: TGTTGGTAAGTGTGTGCTTACTCCCTGACCAGATGCTGCGGTGCACGGGGCAGCCACCATCTCTGCATGCATGTCTGTGATGTCTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545921.5
CDS CCA 90 bp TGCTCATCGTGGGCAGCCAACAGCTGCTCTCGGAGGCTGGTCAGCTaGTTGATCATACCCATGAGTTGCCTTTCTTTCTCAGCTAAGCTC +
Preference number: 5 (lower is better)
Translates to: CSSWAANSCSRRLVS*LIIPMSCLSFSAKL
Trigger: GAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
ENST00000659413.1
CDS GCA 90 bp TTCTTCCACTTTCTGTCTGCTTGTCACCATGGCTACCTCTCCATCTaGTTCCCCATACGGAGAGGCTGGTCGCTTGGAAGACATCCTGCT +
Preference number: 5 (lower is better)
Translates to: FFHFLSACHHGYLSI*FPIRRGWSLGRHPA
Trigger: AGCAGGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000446891.7
ENST00000536729.2
ENST00000646273.1
CDS CCA 90 bp GCGTCAGCAGAGAAACTGGCTGAAATTCCTCAGAGTGAGGCTTGTTaGGAAAACTCACATGCAAGGGAAGGTGAAAGGCTGGGAGCCCGT +
Preference number: 5 (lower is better)
Translates to: ASAEKLAEIPQSEAC*ENSHAREGERLGAR
Trigger: ACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000538083.1
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
CDS-3UTR CAA 90 bp TTTCTCAGTGTTGGGGCAAGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGCACTTCAGTACAAATTaGGCACTTGCTCAAAGATGT +
Preference number: 5 (lower is better)
Translates to: FLSVGASVCVCVCARARAHFSTN*ALAQRC
Trigger: ACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTG...CGCGCGCGCGCGCGCACACACACACACACACACACTTGCCCCAACACTGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS GCA 90 bp TTCTTCCACTTTCTGTCTGCTTGTCACCATGGCTACCTCTCCATCTaGTTCCCCATACGGAGAGGCTGGTCGCTTGGAAGACATCACAGA +
Preference number: 5 (lower is better)
Translates to: FFHFLSACHHGYLSI*FPIRRGWSLGRHHR
Trigger: TCTGTGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367206.7
ENST00000541847.5
ENST00000545921.5
CDS GCA 90 bp TTCTTCCACTTTCTGTCTGCTTGTCACCATGGCTACCTCTCCATCTaGTTCCCCATACGGAGAGGCTGGTCGCTTGGAAGACATCCTTTC +
Preference number: 5 (lower is better)
Translates to: FFHFLSACHHGYLSI*FPIRRGWSLGRHPF
Trigger: GAAAGGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000441133.2
ENST00000451604.7
ENST00000537393.5
CDS GCA 90 bp TTCTTCCACTTTCTGTCTGCTTGTCACCATGGCTACCTCTCCATCTaGTTCCCCATACGGAGAGGCTGGTCGCTTGGAAGACATCCAGAA +
Preference number: 5 (lower is better)
Translates to: FFHFLSACHHGYLSI*FPIRRGWSLGRHPE
Trigger: TTCTGGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538083.1
CDS CCA 90 bp CATCATCTTTGGGTCACCAATGGCCAGCACAGCACCTGCCACATTTaGGGAGGCTTGTCCAAAACTTCTGAGGATCCTCCTGAAGTATGG +
Preference number: 5 (lower is better)
Translates to: HHLWVTNGQHSTCHI*GGLSKTSEDPPEVW
Trigger: CCATACTTCAGGAGGATCCTCAGAAGTTTTGGACAAGCCTCCCCAAATGTGGCAGGTGCTGTGCTGGCCATTGGTGACCCAAAGATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429944.6
ENST00000538905.1
ENST00000646273.1
ENST00000659413.1
CDS-3UTR CAA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATTCAGCTAAACTGCCCTaGCGCCGTTCAGGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNSAKLP*RRSGVP
Trigger: GGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGA...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS TCA 90 bp CTAGACAAGGACTCGCCACTCTGTCGCCCACCTTCTTCTGCCTTCTaGGGTGAGGTAGATGAGTTGTGTGGGGCAAATGAAGACATAACT +
Preference number: 5 (lower is better)
Translates to: LDKDSPLCRPPSSAF*GEVDELCGANEDIT
Trigger: AGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000441133.2
ENST00000451604.7
ENST00000536729.2
ENST00000537393.5
ENST00000538083.1
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
ENST00000659413.1
CDS GCA 90 bp AGCTGCTCTCGGAGGCTGGTCAGCTGGTTGATCATACCCATGAGTTaGCTTTCTTTCTCAGCTAAGCTCTCGGGAGTCCCTTTTATTTCG +
Preference number: 5 (lower is better)
Translates to: SCSRRLVSWLIIPMS*LSFSAKLSGVPFIS
Trigger: CGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
ENST00000659413.1
CDS-3UTR CAA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGTGCAGCCAGTGTCCGTaGATCAGGAGGGAATACGGG +
Preference number: 5 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWCSQCP*IRREYG
Trigger: CCCGTATTCCCTCCTGATCAACGGACACTGGCTGCA...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGCCAATGCGCAGCTTTTaGCCATCCACCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWPMRSF*PSTRQV
Trigger: CACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTGG...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS TCA 90 bp CTGTCTTGCAATCTGCCATGTATGGTAGAGAAGCGCTGGGAGAGCTaGATGGGCTCTAGAAACATGACCTGTAGCTATCACCAGGGATCT +
Preference number: 5 (lower is better)
Translates to: LSCNLPCMVEKRWES*MGSRNMTCSYHQGS
Trigger: AGATCCCTGGTGATAGCTACAGGTCATGTTTCTAGAGCCCATTCAGCTCTCCCAGCGCTTCTCTACCATACATGGCAGATTGCAAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536629.5
CDS TCA 90 bp ATTCTTCTAAATCTTGTTTCGGTCTGGTCCTTCTCGGCAGCCCACTaGGCAGAATGCAGCTCTACAATGAAGGCGCAAGAGCTGGGAACA +
Preference number: 5 (lower is better)
Translates to: ILLNLVSVWSFSAAH*AECSSTMKAQELGT
Trigger: TGTTCCCAGCTCTTGCGCCTTCATTGTAGAGCTGCATTCTGCTCAGTGGGCTGCCGAGAAGGACCAGACCGAAACAAGATTTAGAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538083.1
CDS CCA 90 bp AGTGGGAGTCCTATGGCCACAAGTCTCTTGCGTCAGCAGAGAAACTaGCTGAAATTCCTCAGAGTGAGGCTTGTTGGGAAAACTCACATG +
Preference number: 5 (lower is better)
Translates to: SGSPMATSLLRQQRN*LKFLRVRLVGKTHM
Trigger: CATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000538083.1
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
CDS CCA 90 bp GGCAAGACAGTGGCTTCTTCAAAAGGGTACCTTGCTTTTGGGTGGTaGGCTGTTTGTGCTCTTGTCTGTGTGAATGCTGGTAGGAGATAC +
Preference number: 5 (lower is better)
Translates to: GKTVASSKGYLAFGW*AVCALVCVNAGRRY
Trigger: GTATCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGCCCACCACCCAAAAGCAAGGTACCCTTTTGAAGAAGCCACTGTCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536911.1
CDS CCA 90 bp AGTGGCAAGACAGTGGCTTCTTCAAAAGGGTACCTTGCTTTTGGGTaGTGGGCTGTTTGTGCTCTTGTCTGTGTGAATGCTGGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: SGKTVASSKGYLAFG*WAVCALVCVNAGRR
Trigger: TCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGCCCACCACCCAAAAGCAAGGTACCCTTTTGAAGAAGCCACTGTCTTGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536911.1
CDS-3UTR CAA 90 bp TTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGGTTTCCACTTTCTGTCTGCTaGTCACCATGGCTACCTCTC +
Preference number: 5 (lower is better)
Translates to: FLDQSLGRMWDFIPRCGFPLSVC*SPWLPL
Trigger: GAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGG...AAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp CACACTTCTGAAATGCTAAAGGCCTCCACCTCACTTCATGGAGGGGTGAAAAATCTGGAGATACCTGCATaGCAGCTAGCTGGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: HTSEMLKASTSLHGGVKNLEIPA*QLAGQH
Trigger: ATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAG...ATTTTTCACCCCTCCATGAAGTGAGGTGGAGGCCTTTAGCATTTCAGAAGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTCAGCTAAACTGCCCTaGCGCCGTTCAGGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPSAKLP*RRSGVP
Trigger: GGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTGGCGGCAGCTGACCTaGAACCTGGATCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPWRQLT*NLDLLL
Trigger: CAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTGCAGCCAGTGTCCGTaGATCAGGAGGGAATACGGG +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPCSQCP*IRREYG
Trigger: CCCGTATTCCCTCCTGATCAACGGACACTGGCTGCA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTAGCACCAAGGTTGCCTaGGGGTATGCCTGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPSTKVA*GYAWQL
Trigger: AAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGCT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCCCATCAAGCACCTGTaGTTCCCGTCGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPPIKHL*FPSELL
Trigger: GAGCAACTCCGACGGGAACAACAGGTGCTTGATGGG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451604.7
ENST00000537393.5
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCCAATGCGCAGCTTTTaGCCATCCACCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPPMRSF*PSTRQV
Trigger: CACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTGG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp CTGCCCCCAGCTGGAAACTCACTTTACTTGTTGAAGCCCACAATTTCTTCAAAGGGAGAGGCTGGTCGCTaGGAAGACATCTCTGAAAAC +
Preference number: 5 (lower is better)
Translates to: LPPAGNSLYLLKPTISSKGEAGR*EDISEN
Trigger: GTTTTCAGAGATGTCTTCCAAGCGACCAGCCTCTCC...CTTTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGTTTCCAGCTGGGGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp CACACTTCTGAAATGCTAAAGGCCTCCACCTCACTTCATGGAGGGGTGAAAAATGGTGAGGTAGATGAGTaGTGTGGGGCAAATGAAGAC +
Preference number: 5 (lower is better)
Translates to: HTSEMLKASTSLHGGVKNGEVDE*CGANED
Trigger: GTCTTCATTTGCCCCACACAACTCATCTACCTCACC...ATTTTTCACCCCTCCATGAAGTGAGGTGGAGGCCTTTAGCATTTCAGAAGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp TTCAGCCATGAATGCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTCAGCTAAACTGCCCTaGCGCCGTTCAGGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: FSHECLQWHLPGAKTKYSSAKLP*RRSGVP
Trigger: GGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGA...AGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGCATTCATGGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACAGGCTGGTCAGCTGGTaGATCATACCCATGAGTTGC +
Preference number: 5 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYRLVSW*IIPMSC
Trigger: GCAACTCATGGGTATGATCAACCAGCTGACCAGCCT...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATTGCAATTTGTTCTTGTaGCTGCTTGGCCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNCNLFL*LLGQLH
Trigger: ATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCA...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATTGCAGCCAGTGTCCGTaGATCAGGAGGGAATACGGG +
Preference number: 5 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNCSQCP*IRREYG
Trigger: CCCGTATTCCCTCCTGATCAACGGACACTGGCTGCA...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCTGGAGATACCTGCATaGCAGCTAGCTGGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPLEIPA*QLAGQH
Trigger: ATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATAGCACCAAGGTTGCCTaGGGGTATGCCTGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNSTKVA*GYAWQL
Trigger: AAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGCT...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp GCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTTGTGCCACTTCATCCTaGCTTTTGGGTGGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: AFNGIYLELKQSILVAQTCATSS*LLGGGL
Trigger: CAGCCCACCACCCAAAAGCAAGGATGAAGTGGCACA...AGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACCTTGCTGAGACGGGCTaGCTCCTCATAATATGGCTG +
Preference number: 5 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYLAETG*LLIIWL
Trigger: CAGCCATATTATGAGGAGCAAGCCCGTCTCAGCAAG...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACGGCCCTACAACTGCCTaGGCATTTGGCTGGCAAAAT +
Preference number: 5 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYGPTTA*AFGWQN
Trigger: ATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCC...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCCACTTTCTGTCTGCTaGTCACCATGGCTACCTCTC +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPPLSVC*SPWLPL
Trigger: GAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp AGGATCCCTGGGTGCAGCCAGGCTCCATTTTATTGGGCTGCAATGACTTTTAATTCTTCCGGCTCGTTTTaGATGAGCTCTTCCATTTTC +
Preference number: 5 (lower is better)
Translates to: RIPGCSQAPFYWAAMTFNSSGSF*MSSSIF
Trigger: GAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGA...ATTAAAAGTCATTGCAGCCCAATAAAATGGAGCCTGGCTGCACCCAGGGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp CTGCCCCCAGCTGGAAACTCACTTTACTTGTTGAAGCCCACAATTTCTTCAAAGCCCATTGCAAGAAGCTaGTCTTTCCAGTCCTTTGAG +
Preference number: 5 (lower is better)
Translates to: LPPAGNSLYLLKPTISSKPIARS*SFQSFE
Trigger: CTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGG...CTTTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGTTTCCAGCTGGGGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTAGGCTGGTCAGCTGGTaGATCATACCCATGAGTTGC +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPRLVSW*IIPMSC
Trigger: GCAACTCATGGGTATGATCAACCAGCTGACCAGCCT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTTGGCGGCAGCTGACCTaGAACCTGGATCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKIWRQLT*NLDLLL
Trigger: CAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCA...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTGGCGGCAGCTGACCTaGAACCTGGATCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCWRQLT*NLDLLL
Trigger: CAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTGCAGCCAGTGTCCGTaGATCAGGAGGGAATACGGG +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCCSQCP*IRREYG
Trigger: CCCGTATTCCCTCCTGATCAACGGACACTGGCTGCA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTAGCACCAAGGTTGCCTaGGGGTATGCCTGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCSTKVA*GYAWQL
Trigger: AAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGCT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATCTTGCTGAGACGGGCTaGCTCCTCATAATATGGCTG +
Preference number: 5 (lower is better)
Translates to: FICTGPTTALAFGWQNLHLAETG*LLIIWL
Trigger: CAGCCATATTATGAGGAGCAAGCCCGTCTCAGCAAG...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCTTGCTGAGACGGGCTaGCTCCTCATAATATGGCTG +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPLAETG*LLIIWL
Trigger: CAGCCATATTATGAGGAGCAAGCCCGTCTCAGCAAG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp TTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGGTTTCAACTGCCTTGGCATTaGGCTGGCAAAATCTACATA +
Preference number: 5 (lower is better)
Translates to: FLDQSLGRMWDFIPRCGFQLPWH*AGKIYI
Trigger: TATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTG...AAACCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp ACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCACGGTCATTACCAGCACCTGCCACATTaGGGGAGGCTTGTCCAAAAC +
Preference number: 5 (lower is better)
Translates to: TITLPPVYSFHLFVHGHYQHLPH*GRLVQN
Trigger: GTTTTGGACAAGCCTCCCCAAATGTGGCAGGTGCTG...GTAATGACCGTGGACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGGAGAGGCTGGTCGCTaGGAAGACATCCTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCGEAGR*EDILLS
Trigger: ACTCAGCAGGATGTCTTCCAAGCGACCAGCCTCTCC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CAA 90 bp TCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCACGGCCACTTTCTGTCTGCTaGTCACCATGGCTACCTCTC +
Preference number: 5 (lower is better)
Translates to: STNHNSSTCLFLSSLCPRPLSVC*SPWLPL
Trigger: GAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGG...CCGTGGACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp CACACTTCTGAAATGCTAAAGGCCTCCACCTCACTTCATGGAGGGGTGAAAAATTGCCATCAACTTCCATaGTATTGTGCTGAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: HTSEMLKASTSLHGGVKNCHQLP*YCAEKW
Trigger: CCACTTCTCAGCACAATACAATGGAAGTTGATGGCA...ATTTTTCACCCCTCCATGAAGTGAGGTGGAGGCCTTTAGCATTTCAGAAGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGGTGAGGTAGATGAGTaGTGTGGGGCAAATGAAGAC +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPGEVDE*CGANED
Trigger: GTCTTCATTTGCCCCACACAACTCATCTACCTCACC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTAGTTCCCCGATCCCATaGCAAGAAGCTTGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPSSPIP*QEACLS
Trigger: GGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACTGCAATTTGTTCTTGTaGCTGCTTGGCCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYCNLFL*LLGQLH
Trigger: ATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCA...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCTGGAGATACCTGCATaGCAGCTAGCTGGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCLEIPA*QLAGQH
Trigger: ATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATACTTCATCCTTGCTTTaGGGTGGTGGGCTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: FICTGPTTALAFGWQNLHTSSLL*GGGLFV
Trigger: CACAAACAGCCCACCACCCAAAAGCAAGGATGAAGT...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTGTGCCACTTCATCCTaGCTTTTGGGTGGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCCATSS*LLGGGL
Trigger: CAGCCCACCACCCAAAAGCAAGGATGAAGTGGCACA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000451604.7
ENST00000537393.5
CDS-3UTR CAA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGAATGGGGATCTGTGCTaGTTGCCCAACATTGAAGTA +
Preference number: 5 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWNGDLC*LPNIEV
Trigger: TACTTCAATGTTGGGCAACAAGCACAGATCCCCATT...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGACATCTGGGAGCAGTTaGCTAGTAGCTTCCATGTTA +
Preference number: 5 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWTSGSS*LVASML
Trigger: TAACATGGAAGCTACTAGCAAACTGCTCCCAGATGT...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp TCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCACGGGACTGGAGATGGGTTTaGGTGGCTCGCCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: STNHNSSTCLFLSSLCPRDWRWV*VARLFH
Trigger: GTGAAAAAGGCGAGCCACCAAAACCCATCTCCAGTC...CCGTGGACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCAGCACCTGCCACATTaGGGGAGGCTTGTCCAAAAC +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCQHLPH*GRLVQN
Trigger: GTTTTGGACAAGCCTCCCCAAATGTGGCAGGTGCTG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CAA 90 bp ACTCTTTTTAATTTAAAGTATTATAATGGCCTTGTAACTGAACTTCCTGCCCCCTCAGCTAAACTGCCCTaGCGCCGTTCAGGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: TLFNLKYYNGLVTELPAPSAKLP*RRSGVP
Trigger: GGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGA...GGGGGCAGGAAGTTCAGTTACAAGGCCATTATAATACTTTAAATTAAAAAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACTCTTCCGGCTCGTTTTaGATGAGCTCTTCCATTTTC +
Preference number: 5 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYSSGSF*MSSSIF
Trigger: GAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGA...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp TCATCGGTAAGTGTGTTAGAATTGATTTCAGCCATGAATGCCTTCAATGGCATCAGTTCCCCGATCCCATaGCAAGAAGCTTGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: SSVSVLELISAMNAFNGISSPIP*QEACLS
Trigger: GGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACT...GATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACACTTACCGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTAGGCTGGTCAGCTGGTaGATCATACCCATGAGTTGC +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCRLVSW*IIPMSC
Trigger: GCAACTCATGGGTATGATCAACCAGCTGACCAGCCT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp CTTTCCCTTTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTAGGCTGGTCAGCTGGTaGATCATACCCATGAGTTGC +
Preference number: 5 (lower is better)
Translates to: LSLLPTQRILLTITLPPVRLVSW*IIPMSC
Trigger: GCAACTCATGGGTATGATCAACCAGCTGACCAGCCT...AACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAAAGGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTGCAATTTGTTCTTGTaGCTGCTTGGCCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPCNLFL*LLGQLH
Trigger: ATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTCTTGCAATTTGTTCTaGTTGCTGCTTGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPSCNLF*LLLGQL
Trigger: GAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTATGGCGGCAGCTGACCTaGAACCTGGATCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVWRQLT*NLDLLL
Trigger: CAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCA...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTACCCATCAAGCACCTGTaGTTCCCGTCGGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVPIKHL*FPSELL
Trigger: GAGCAACTCCGACGGGAACAACAGGTGCTTGATGGG...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCTTGCTGAGACGGGCTaGCTCCTCATAATATGGCTG +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCLAETG*LLIIWL
Trigger: CAGCCATATTATGAGGAGCAAGCCCGTCTCAGCAAG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTAAGCACAATTTCCCTTaGTCACAGCAGCCACCTATG +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPKHNFP*SQQPPM
Trigger: CATAGGTGGCTGCTGTGACAAAGGGAAATTGTGCTT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
CDS-3UTR CAA 90 bp CACACTTCTGAAATGCTAAAGGCCTCCACCTCACTTCATGGAGGGGTGAAAAATCTGCTTGAACCAAAGTaGGACTTCAGTGGATTAATC +
Preference number: 5 (lower is better)
Translates to: HTSEMLKASTSLHGGVKNLLEPK*DFSGLI
Trigger: GATTAATCCACTGAAGTCCAACTTTGGTTCAAGCAG...ATTTTTCACCCCTCCATGAAGTGAGGTGGAGGCCTTTAGCATTTCAGAAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGACTGGAGATGGGTTTaGGTGGCTCGCCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCDWRWV*VARLFH
Trigger: GTGAAAAAGGCGAGCCACCAAAACCCATCTCCAGTC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS TCA 90 bp CACAATTTCCCTTTGTCACAGCAGCCACCTATGATCGTCTCCAACTaGACCTGTCAAGTGAGTCCAAACCTTCTAAACCAATTGATTTTC +
Preference number: 5 (lower is better)
Translates to: HNFPLSQQPPMIVSN*TCQVSPNLLNQLIF
Trigger: GAAAATCAATTGGTTTAGAAGGTTTGGACTCACTTGACAGGTTCAGTTGGAGACGATCATAGGTGGCTGCTGTGACAAAGGGAAATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381381.6
CDS-3UTR CAA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTGGTGAGGTAGATGAGTaGTGTGGGGCAAATGAAGAC +
Preference number: 5 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKIGEVDE*CGANED
Trigger: GTCTTCATTTGCCCCACACAACTCATCTACCTCACC...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGGTGAGGTAGATGAGTaGTGTGGGGCAAATGAAGAC +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCGEVDE*CGANED
Trigger: GTCTTCATTTGCCCCACACAACTCATCTACCTCACC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTCTTCCGGCTCGTTTTaGATGAGCTCTTCCATTTTC +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPSSGSF*MSSSIF
Trigger: GAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTAGTTCCCCGATCCCATaGCAAGAAGCTTGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCSSPIP*QEACLS
Trigger: GGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACTTCATCCTTGCTTTaGGGTGGTGGGCTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCTSSLL*GGGLFV
Trigger: CACAAACAGCCCACCACCCAAAAGCAAGGATGAAGT...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451604.7
ENST00000537393.5
CDS-3UTR CAA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCAGGGGATCTGTGCTTGTaGCCCAACATTGAAGTACTG +
Preference number: 5 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTAGDLCL*PNIEVL
Trigger: CAGTACTTCAATGTTGGGCAACAAGCACAGATCCCC...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTGGGGATCTGTGCTTGTaGCCCAACATTGAAGTACTG +
Preference number: 5 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKIGDLCL*PNIEVL
Trigger: CAGTACTTCAATGTTGGGCAACAAGCACAGATCCCC...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGGGGATCTGTGCTTGTaGCCCAACATTGAAGTACTG +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCGDLCL*PNIEVL
Trigger: CAGTACTTCAATGTTGGGCAACAAGCACAGATCCCC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTAATGGGGATCTGTGCTaGTTGCCCAACATTGAAGTA +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPNGDLC*LPNIEV
Trigger: TACTTCAATGTTGGGCAACAAGCACAGATCCCCATT...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp ATTATTTCTAGACCAGTCACTTGGGAGGATGTGGGATTTCATCCCCAGATGTGGTTGCAAATACTCTGCTaGAACCAAAGTTGGACTTCA +
Preference number: 5 (lower is better)
Translates to: IISRPVTWEDVGFHPQMWLQILC*NQSWTS
Trigger: TGAAGTCCAACTTTGGTTCAAGCAGAGTATTTGCAA...CCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp GCCCCCAGCTGGAAACTCACTTTACTTGTTGAAGCCCACAATTTCTTCAAAGCATCAGCTTTCAGAATCTaGTCAACAGATTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: APSWKLTLLVEAHNFFKASAFRI*STDSNR
Trigger: CCTGTTTGAATCTGTTGACAAGATTCTGAAAGCTGA...TGCTTTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGTTTCCAGCTGGGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS TCA 90 bp TGTATTTTAAGGTCTATTTCAGTTTTCCCTTCTCTGGCAAACTCCTaGTGGGATCTCTCCCTGAAGATGATCTCTGCCTCCCAATATAAC +
Preference number: 5 (lower is better)
Translates to: CILRSISVFPSLANS*WDLSLKMISASQYN
Trigger: GTTATATTGGGAGGCAGAGATCATCTTCAGGGAGAGATCCCATCAGGAGTTTGCCAGAGAAGGGAAAACTGAAATAGACCTTAAAATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536911.1
CDS-3UTR CAA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTACCACTTTCTGTCTGCTaGTCACCATGGCTACCTCTC +
Preference number: 5 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVPLSVC*SPWLPL
Trigger: GAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGG...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp TCCCTTTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTTATGGTGAGGTAGATGAGTaGTGTGGGGCAAATGAAGAC +
Preference number: 5 (lower is better)
Translates to: SLLPTQRILLTITLPPVYGEVDE*CGANED
Trigger: GTCTTCATTTGCCCCACACAACTCATCTACCTCACC...ATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp TTGAATTTATTTAACTGGGGAGGTGGAAGGGACTCTTATTCATTGTTGTGTGCCTCTTCCGGCTCGTTTTaGATGAGCTCTTCCATTTTC +
Preference number: 5 (lower is better)
Translates to: LNLFNWGGGRDSYSLLCASSGSF*MSSSIF
Trigger: GAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGA...GGCACACAACAATGAATAAGAGTCCCTTCCACCTCCCCAGTTAAATAAATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCCCATTGCAAGAAGCTaGTCTTTCCAGTCCTTTGAG +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCPIARS*SFQSFE
Trigger: CTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTCCCATTGCAAGAAGCTaGTCTTTCCAGTCCTTTGAG +
Preference number: 5 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKIPIARS*SFQSFE
Trigger: CTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGG...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTGCAATTTGTTCTTGTaGCTGCTTGGCCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCCNLFL*LLGQLH
Trigger: ATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTTCTTGCAATTTGTTCTaGTTGCTGCTTGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKISCNLF*LLLGQL
Trigger: GAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGA...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGCACAATTTCCCTTaGTCACAGCAGCCACCTATG +
Preference number: 5 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVKHNFP*SQQPPM
Trigger: CATAGGTGGCTGCTGTGACAAAGGGAAATTGTGCTT...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp CATTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACTTGCAAATACTCTGCTaGAACCAAAGTTGGACTTCA +
Preference number: 5 (lower is better)
Translates to: HLFVQALQLPWHLAGKIYLQILC*NQSWTS
Trigger: TGAAGTCCAACTTTGGTTCAAGCAGAGTATTTGCAA...GTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp TTCAGCCATGAATGCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTCAACTGCCTTGGCATTaGGCTGGCAAAATCTACATA +
Preference number: 5 (lower is better)
Translates to: FSHECLQWHLPGAKTKYSQLPWH*AGKIYI
Trigger: TATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTG...AGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGCATTCATGGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTAGGCCCTACAACTGCCTaGGCATTTGGCTGGCAAAAT +
Preference number: 5 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVGPTTA*AFGWQN
Trigger: ATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCC...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTCACATTTGGGGAGGCTaGTCCAAAACTTCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCHIWGG*SKTSED
Trigger: ATCCTCAGAAGTTTTGGACAAGCCTCCCCAAATGTG...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CAA 90 bp CTTTCCCTTTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTCACATTTGGGGAGGCTaGTCCAAAACTTCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: LSLLPTQRILLTITLPPVHIWGG*SKTSED
Trigger: ATCCTCAGAAGTTTTGGACAAGCCTCCCCAAATGTG...AACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAAAGGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp TTTATTTGTACAGGCCCTACAACTGCCTTGGCATTTGGCTGGCAAAATCTACATTGCAGCGGTATGAACTaGCTTTTTGTTTCGGTTCAT +
Preference number: 5 (lower is better)
Translates to: FICTGPTTALAFGWQNLHCSGMN*LFVSVH
Trigger: ATGAACCGAAACAAAAAGCAAGTTCATACCGCTGCA...ATGTAGATTTTGCCAGCCAAATGCCAAGGCAGTTGTAGGGCCTGTACAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATGATTATTTCTCAGTGTaGGGGCAAGTGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNDYFSV*GQVCVC
Trigger: ACACACACACACTTGCCCCAACACTGAGAAATAATC...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp TCCCTTTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTTATACTCACTTGTTCTTGTaGCTGCTTGGCCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: SLLPTQRILLTITLPPVYTHLFL*LLGQLH
Trigger: ATGGAGCTGGCCAAGCAGCAACAAGAACAAGTGAGT...ATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp TCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCACGGGTATGGCTCTACACCTaGGACCGTTTAAAAAGCCTT +
Preference number: 5 (lower is better)
Translates to: STNHNSSTCLFLSSLCPRVWLYT*DRLKSL
Trigger: AAGGCTTTTTAAACGGTCCAAGGTGTAGAGCCATAC...CCGTGGACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp TCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCACGGCTTAAAATCCGGGTTTaGTCTGTGGGTGGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: STNHNSSTCLFLSSLCPRLKIRV*SVGGFL
Trigger: CAAAAACCCACCCACAGACAAAACCCGGATTTTAAG...CCGTGGACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTCTTCCGGCTCGTTTTaGATGAGCTCTTCCATTTTC +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCSSGSF*MSSSIF
Trigger: GAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp ACTCTTTTTAATTTAAAGTATTATAATGGCCTTGTAACTGAACTTCCTGCCCCCAGTTCCCCGATCCCATaGCAAGAAGCTTGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: TLFNLKYYNGLVTELPAPSSPIP*QEACLS
Trigger: GGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACT...GGGGGCAGGAAGTTCAGTTACAAGGCCATTATAATACTTTAAATTAAAAAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp ATTTCTGAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCTTTGACCCTTATCAGTaGGCTTGTCCTGCAATATGG +
Preference number: 5 (lower is better)
Translates to: ISEPYTWLSCHLKCKVKVFDPYQ*ACPAIW
Trigger: CCATATTGCAGGACAAGCCAACTGATAAGGGTCAAA...GACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTCAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp TCTCTAAATTTCTTATGTCTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCATTTGACCCTTATCAGTaGGCTTGTCCTGCAATATGG +
Preference number: 5 (lower is better)
Translates to: SLNFLCLSLSLSFHLRTAFDPYQ*ACPAIW
Trigger: CCATATTGCAGGACAAGCCAACTGATAAGGGTCAAA...TGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAGACATAAGAAATTTAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTTTGACCCTTATCAGTaGGCTTGTCCTGCAATATGG +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCFDPYQ*ACPAIW
Trigger: CCATATTGCAGGACAAGCCAACTGATAAGGGTCAAA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTCACTTCAGTACAAATTaGGCACTTGCTCAAAGATGT +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPHFSTN*ALAQRC
Trigger: ACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTG...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp GCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTATATCTAACAGCTTATaGGCTGCACTTCCAAATCAG +
Preference number: 5 (lower is better)
Translates to: AFNGIYLELKQSILVAQTISNSL*AALPNQ
Trigger: CTGATTTGGAAGTGCAGCCAATAAGCTGTTAGATAT...AGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATAAAACGAAAAACAGGTaGGTGGCAACCCACATCTTT +
Preference number: 5 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNKTKNR*VATHIF
Trigger: AAAGATGTGGGTTGCCACCAACCTGTTTTTCGTTTT...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp ACTCTTTTTAATTTAAAGTATTATAATGGCCTTGTAACTGAACTTCCTGCCCCCCTTACTCACTTGTTCTaGTTGCTGCTTGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: TLFNLKYYNGLVTELPAPLTHLF*LLLGQL
Trigger: GAGCTGGCCAAGCAGCAACAAGAACAAGTGAGTAAG...GGGGGCAGGAAGTTCAGTTACAAGGCCATTATAATACTTTAAATTAAAAAGAGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGTATGGCTCTACACCTaGGACCGTTTAAAAAGCCTT +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCVWLYT*DRLKSL
Trigger: AAGGCTTTTTAAACGGTCCAAGGTGTAGAGCCATAC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTTGTCTTTCCAGTCCTTaGAGAGTAGTTTTTCAATAC +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPCLSSP*RVVFQY
Trigger: GTATTGAAAAACTACTCTCAAAGGACTGGAAAGACA...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp GCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTTGTCTTTCCAGTCCTTaGAGAGTAGTTTTTCAATAC +
Preference number: 5 (lower is better)
Translates to: AFNGIYLELKQSILVAQTCLSSP*RVVFQY
Trigger: GTATTGAAAAACTACTCTCAAAGGACTGGAAAGACA...AGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp TTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTCATCTGCTTGAACCAAAGTaGGACTTCAGTGGATTAATC +
Preference number: 5 (lower is better)
Translates to: FNGIYLELKQSILVAQTHLLEPK*DFSGLI
Trigger: GATTAATCCACTGAAGTCCAACTTTGGTTCAAGCAG...ATGAGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp GTTATACATGCACACCTCTATTACACAGGGCCACCTGATCCATCCAATAATAATTTCAGTTGTTGCTCTTaGCAAATACTCTGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: VIHAHLYYTGPPDPSNNNFSCCS*QILCLN
Trigger: GTTCAAGCAGAGTATTTGCAAAGAGCAACAACTGAA...ATTATTATTGGATGGATCAGGTGGCCCTGTGTAATAGAGGTGTGCATGTATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp TCATCGGTAAGTGTGTTAGAATTGATTTCAGCCATGAATGCCTTCAATGGCATCTTCAGTTGTTGCTCTTaGCAAATACTCTGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SSVSVLELISAMNAFNGIFSCCS*QILCLN
Trigger: GTTCAAGCAGAGTATTTGCAAAGAGCAACAACTGAA...GATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACACTTACCGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp TCATCGGTAAGTGTGTTAGAATTGATTTCAGCCATGAATGCCTTCAATGGCATCTCCCATCACATTCAGTaGTTGCTCTTTGCAAATACT +
Preference number: 5 (lower is better)
Translates to: SSVSVLELISAMNAFNGISHHIQ*LLFANT
Trigger: AGTATTTGCAAAGAGCAACAACTGAATGTGATGGGA...GATGCCATTGAAGGCATTCATGGCTGAAATCAATTCTAACACACTTACCGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp GTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTACCTGAAGACATAACTTTATaGCCATCAACTTCATGCAAG +
Preference number: 5 (lower is better)
Translates to: VAQNNKTHSQATCWHCVPEDITL*PSTSCK
Trigger: CTTGCATGAAGTTGATGGCAATAAAGTTATGTCTTC...AGGTACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537393.5
CDS-3UTR CAA 90 bp GCCTTCAATGGCATCTACCTGGAGCTAAAACAAAGTATTCTTGTAGCCCAAACTACATCAGAACTGATATaGTTGGGGCCAAAATTCTTA +
Preference number: 5 (lower is better)
Translates to: AFNGIYLELKQSILVAQTTSELI*LGPKFL
Trigger: TAAGAATTTTGGCCCCAACAATATCAGTTCTGATGT...AGTTTGGGCTACAAGAATACTTTGTTTTAGCTCCAGGTAGATGCCATTGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp CTCTCTCTCTCTCTCTCTTTTCACCTGAGAACAGCACCTACAGTTTCCATTAAACTTCAACCTGGGAAGTaGATAGTTATAGGATACTTT +
Preference number: 5 (lower is better)
Translates to: LSLSLSFHLRTAPTVSIKLQPGK*IVIGYF
Trigger: AAAGTATCCTATAACTATCAACTTCCCAGGTTGAAG...TTTAATGGAAACTGTAGGTGCTGTTCTCAGGTGAAAAGAGAGAGAGAGAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTCATTTGCTGTTTTTATaGGTGCCTTGCATGGCAGTA +
Preference number: 5 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKIHLLFL*VPCMAV
Trigger: TACTGCCATGCAAGGCACCAATAAAAACAGCAAATG...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTAAATGGGGATCTGTGCTaGTTGCCCAACATTGAAGTA +
Preference number: 5 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVNGDLC*LPNIEV
Trigger: TACTTCAATGTTGGGCAACAAGCACAGATCCCCATT...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp GAGCCCTATACTTGGTTAAGTTGTCATTTGAAGTGCAAAGTCAAGGTCAAGATTTCCCATCACATTCAGTaGTTGCTCTTTGCAAATACT +
Preference number: 5 (lower is better)
Translates to: EPYTWLSCHLKCKVKVKISHHIQ*LLFANT
Trigger: AGTATTTGCAAAGAGCAACAACTGAATGTGATGGGA...AATCTTGACCTTGACTTTGCACTTCAAATGACAACTTAACCAAGTATAGGGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTCAGCTTTCAGAATCTaGTCAACAGATTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCSAFRI*STDSNR
Trigger: CCTGTTTGAATCTGTTGACAAGATTCTGAAAGCTGA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646273.1
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTGTTTTTATTGGTGCCTaGCATGGCAGTAATACTGAA +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCVFIGA*HGSNTE
Trigger: TTCAGTATTACTGCCATGCAAGGCACCAATAAAAAC...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp AGAATTCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTCATCTCTTTGTCCTAGTTCTTACTCACTaGTTCTTGTTGCTGCTTGGC +
Preference number: 5 (lower is better)
Translates to: RILLTITLPPVYSFHLFVLVLTH*FLLLLG
Trigger: GCCAAGCAGCAACAAGAACAAGTGAGTAAGAACTAG...GACAAAGAGATGAAAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp TTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTTATTCCTTATTCCTTTCATCTCTTaGTCCACGGTCATTACCCTG +
Preference number: 5 (lower is better)
Translates to: FAYSKNSTNHNSSTCLFLIPFIS*STVITL
Trigger: CAGGGTAATGACCGTGGACAAAGAGATGAAAGGAAT...AAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp AATTGTAGCACAAAACAACAAAACACATTCACAAGCCACTTGTTGGCACTGTGTTGTCTTTCCAGTCCTTaGAGAGTAGTTTTTCAATAC +
Preference number: 5 (lower is better)
Translates to: NCSTKQQNTFTSHLLALCCLSSP*RVVFQY
Trigger: GTATTGAAAAACTACTCTCAAAGGACTGGAAAGACA...ACACAGTGCCAACAAGTGGCTTGTGAATGTGTTTTGTTGTTTTGTGCTACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000646273.1
CDS-3UTR CAA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTAAGAAAGTTAATGTGCTaGGCCACTGGTAAGGATGAA +
Preference number: 5 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVRKLMC*ATGKDE
Trigger: TTCATCCTTACCAGTGGCCAAGCACATTAACTTTCT...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381381.6
ENST00000451604.7
CDS-3UTR CAA 90 bp GCTGGAAACTCACTTTACTTGTTGAAGCCCACAATTTCTTCAAAGCATATCTCAGAAGACATAACTTTATaGCCATCAACTTCATGCAAG +
Preference number: 5 (lower is better)
Translates to: AGNSLYLLKPTISSKHISEDITL*PSTSCK
Trigger: CTTGCATGAAGTTGATGGCAATAAAGTTATGTCTTC...TGAGATATGCTTTGAAGAAATTGTGGGCTTCAACAAGTAAAGTGAGTTTCCAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS-3UTR CAA 90 bp AAAATGAACTTGGTCAACACTTCAGTACAAATTTGGCACTTGCTCAAAGATGTAGTAAGTGTGTTAGAATaGATTTCAGCCATGAATGCC +
Preference number: 5 (lower is better)
Translates to: KMNLVNTSVQIWHLLKDVVSVLE*ISAMNA
Trigger: GGCATTCATGGCTGAAATCAATTCTAACACACTTAC...TACATCTTTGAGCAAGTGCCAAATTTGTACTGAAGTGTTGACCAAGTTCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451604.7
CDS-3UTR CAA 90 bp TTTGCCTACTCAAAGAATTCTACTAACCATAACTCTTCCACCTGTTTATTCCTTTGTCTTTCCAGTCCTTaGAGAGTAGTTTTTCAATAC +
Preference number: 5 (lower is better)
Translates to: FAYSKNSTNHNSSTCLFLCLSSP*RVVFQY
Trigger: GTATTGAAAAACTACTCTCAAAGGACTGGAAAGACA...AAGGAATAAACAGGTGGAAGAGTTATGGTTAGTAGAATTCTTTGAGTAGGCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS CCA 72 bp GTCTCGTTAATGCCTCCTCCGGCGTGGGATGCAAAGTaGCACAGAGGCGGGCTGGGGGCCCCCGGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: VSLMPPPAWDAK*HRGGLGAPGRR
Trigger: TCTCCTCCCGGGGGCCCCCAGCCCGCCTCTGTGCCACTTTGCATCCCACGCCGGAGGAGGCATTAACGAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000429944.6
ENST00000446891.7
ENST00000456299.2
ENST00000646273.1
ENST00000659413.1
CDS CCA 72 bp GCACCTTACCCGGTCTCGTTAATGCCTCCTCCGGCGTaGGATGCAAAGTGGCACAGAGGCGGGCTGGGGGCC +
Preference number: 6 (lower is better)
Translates to: APYPVSLMPPPA*DAKWHRGGLGA
Trigger: GGCCCCCAGCCCGCCTCTGTGCCACTTTGCATCCCACGCCGGAGGAGGCATTAACGAGACCGGGTAAGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446891.7
CDS CCA 72 bp AATGCAGCACCGGTCTCGTTAATGCCTCCTCCGGCGTaGGATGCAAAGTGGCACAGAGGCGGGCTGGGGGCC +
Preference number: 6 (lower is better)
Translates to: NAAPVSLMPPPA*DAKWHRGGLGA
Trigger: GGCCCCCAGCCCGCCTCTGTGCCACTTTGCATCCCACGCCGGAGGAGGCATTAACGAGACCGGTGCTGCATT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429944.6
ENST00000456299.2
CDS CCA 72 bp AAGCCTTACCCGGTCTCGTTAATGCCTCCTCCGGCGTaGGATGCAAAGTGGCACAGAGGCGGGCTGGGGGCC +
Preference number: 6 (lower is better)
Translates to: KPYPVSLMPPPA*DAKWHRGGLGA
Trigger: GGCCCCCAGCCCGCCTCTGTGCCACTTTGCATCCCACGCCGGAGGAGGCATTAACGAGACCGGGTAAGGCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000646273.1
ENST00000659413.1
CDS CCA 72 bp GCTTGGAAGACATCACAGACATGCATGCAGAGATGGTaGCTGCCCCGTGCACCGCAGCATCTGGTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: AWKTSQTCMQRW*LPRAPQHLVRE
Trigger: CTCCCTGACCAGATGCTGCGGTGCACGGGGCAGCCACCATCTCTGCATGCATGTCTGTGATGTCTTCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545921.5
CDS CAA 90 bp TGCCTTGGGGTATGCCTGGCAGCTTCCCTCCTGGAGATACCTGCATaGCAGCTAGCTGGGCAGCATATAACTGCTGCAGTTGGAGTGGGC +
Preference number: 6 (lower is better)
Translates to: CLGVCLAASLLEIPA*QLAGQHITAAVGVG
Trigger: GCCCACTCCAACTGCAGCAGTTATATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000535530.5
ENST00000536629.5
ENST00000536911.1
ENST00000537393.5
ENST00000545921.5
ENST00000646273.1
CDS GCA 72 bp ATCACAGACATGCATGCAGAGATGGTGGCTGCCCCGTaGACCGCAGCATCTGGTCAGGGAGTAAGCACACAC +
Preference number: 6 (lower is better)
Translates to: ITDMHAEMVAAP*TAASGQGVSTH
Trigger: GTGTGTGCTTACTCCCTGACCAGATGCTGCGGTGCACGGGGCAGCCACCATCTCTGCATGCATGTCTGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545921.5
CDS GCA 72 bp GGAAGACATCACAGACATGCATGCAGAGATGGTGGCTaGCCCGTGCACCGCAGCATCTGGTCAGGGAGTAAG +
Preference number: 6 (lower is better)
Translates to: GRHHRHACRDGG*PVHRSIWSGSK
Trigger: CTTACTCCCTGACCAGATGCTGCGGTGCACGGGGCAGCCACCATCTCTGCATGCATGTCTGTGATGTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545921.5
CDS GCA 72 bp TGGGGTATGCCTGGCAGCTTCCCTCCTGGAGATACCTaGATTGCAGCTAGCTGGGCAGCATATAACTGCTGC +
Preference number: 6 (lower is better)
Translates to: WGMPGSFPPGDT*IAASWAAYNCC
Trigger: GCAGCAGTTATATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCAGGCATACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000535530.5
ENST00000536629.5
ENST00000536911.1
ENST00000537393.5
ENST00000545921.5
ENST00000646273.1
CDS CCA 72 bp ATGCTGGTAGGAGATACAGCAGCACCAAGGTTGCCTTaGGGTATGCCTGGCAGCTTCCCTCCTGGAGATACC +
Preference number: 6 (lower is better)
Translates to: MLVGDTAAPRLP*GMPGSFPPGDT
Trigger: GGTATCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGCTGCTGTATCTCCTACCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000535530.5
ENST00000536629.5
ENST00000536911.1
ENST00000537393.5
ENST00000542241.5
ENST00000545921.5
ENST00000646273.1
CDS CAA 90 bp ACTACATCCAGCCTTATAGCTGAAGCCTGGAGGGAGGAGGAATCCTaGCTGGGCAGCTGCAGCCAGTGTCCGTTGATCAGGAGGGAATAC +
Preference number: 6 (lower is better)
Translates to: TTSSLIAEAWREEES*LGSCSQCPLIRREY
Trigger: GTATTCCCTCCTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000535530.5
ENST00000536629.5
ENST00000536911.1
ENST00000537393.5
ENST00000545921.5
ENST00000646273.1
CDS CAA 90 bp GTCTGTGTGAATGCTGGTAGGAGATACAGCAGCACCAAGGTTGCCTaGGGGTATGCCTGGCAGCTTCCCTCCTGGAGATACCTGCATTGC +
Preference number: 6 (lower is better)
Translates to: VCVNAGRRYSSTKVA*GYAWQLPSWRYLHC
Trigger: GCAATGCAGGTATCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGCTGCTGTATCTCCTACCAGCATTCACACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000535530.5
ENST00000536629.5
ENST00000536911.1
ENST00000537393.5
ENST00000542241.5
ENST00000545921.5
ENST00000646273.1
CDS CAA 90 bp TGCCTTGGGGTATGCCTGGCAGCTTCCCTCCTGGAGATACCTGCATaGCAGCTAGCTGGGCAGCATATAACTGTCTTGCAGCTGTGCTGT +
Preference number: 6 (lower is better)
Translates to: CLGVCLAASLLEIPA*QLAGQHITVLQLCC
Trigger: ACAGCACAGCTGCAAGACAGTTATATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542241.5
CDS TCA 72 bp AGGAATCCTTGCTGGGCAGCTGCAGCCAGTGTCCGTTaGTCAGGAGGGAATACGGGAATCATTAATGGCGGC +
Preference number: 6 (lower is better)
Translates to: RNPCWAAAASVR*SGGNTGIINGG
Trigger: GCCGCCATTAATGATTCCCGTATTCCCTCCTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000535530.5
ENST00000536629.5
ENST00000536911.1
ENST00000537393.5
ENST00000545921.5
ENST00000646273.1
CDS CCA 72 bp GGCTACCTCTCCATCTGCTTCCCCATACGGAGAGGCTaGTCGCTTGGAAGACATCACAGACATGCATGCAGA +
Preference number: 6 (lower is better)
Translates to: GYLSICFPIRRG*SLGRHHRHACR
Trigger: TCTGCATGCATGTCTGTGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367206.7
ENST00000541847.5
ENST00000545921.5
CDS CCA 72 bp TGGGTCACCAATGGCCAGCACAGCACCTGCCACATTTaGGGAGGCTTGTCCAAAACTTCTGAGGATCCTCCT +
Preference number: 6 (lower is better)
Translates to: WVTNGQHSTCHI*GGLSKTSEDPP
Trigger: AGGAGGATCCTCAGAAGTTTTGGACAAGCCTCCCCAAATGTGGCAGGTGCTGTGCTGGCCATTGGTGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000429944.6
ENST00000538905.1
ENST00000646273.1
ENST00000659413.1
CDS CAA 72 bp AATGCTGGTAGGAGATACAGCAGCACCAAGGTTGCCTaGGGGTATGCCTGGCAGCTTCCCTCCTGGAGATAC +
Preference number: 6 (lower is better)
Translates to: NAGRRYSSTKVA*GYAWQLPSWRY
Trigger: GTATCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGCTGCTGTATCTCCTACCAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000535530.5
ENST00000536629.5
ENST00000536911.1
ENST00000537393.5
ENST00000542241.5
ENST00000545921.5
ENST00000646273.1
CDS CAA 90 bp TCATCGTGGGCAGCCAACAGCTGCTCTCGGAGGCTGGTCAGCTGGTaGATCATACCCATGAGTTGCCTTTCTTTCTCAGCTAAGCTCTCG +
Preference number: 6 (lower is better)
Translates to: SSWAANSCSRRLVSW*IIPMSCLSFSAKLS
Trigger: CGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
ENST00000659413.1
CDS GCA 72 bp TTTCTGTCTGCTTGTCACCATGGCTACCTCTCCATCTaGTTCCCCATACGGAGAGGCTGGTCGCTTGGAAGA +
Preference number: 6 (lower is better)
Translates to: FLSACHHGYLSI*FPIRRGWSLGR
Trigger: TCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000441133.2
ENST00000446891.7
ENST00000451604.7
ENST00000536729.2
ENST00000537393.5
ENST00000538083.1
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
ENST00000659413.1
CDS GCA 72 bp TCCTCTGCTTCAAGGTGTCAACAACATCAGCTAAACTaGCCTTGCGCCGTTCAGGAGTTCCCAGGGCTGTAC +
Preference number: 6 (lower is better)
Translates to: SSASRCQQHQLN*PCAVQEFPGLY
Trigger: GTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000441133.2
ENST00000451604.7
ENST00000536729.2
ENST00000537393.5
ENST00000538083.1
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
ENST00000659413.1
CDS GCA 72 bp CGGAGGCTGGTCAGCTGGTTGATCATACCCATGAGTTaGCTTTCTTTCTCAGCTAAGCTCTCGGGAGTCCCT +
Preference number: 6 (lower is better)
Translates to: RRLVSWLIIPMS*LSFSAKLSGVP
Trigger: AGGGACTCCCGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
ENST00000659413.1
CDS GCA 72 bp TGGGGTATGCCTGGCAGCTTCCCTCCTGGAGATACCTaGATTGCAGCTAGCTGGGCAGCATATAACTGTCTT +
Preference number: 6 (lower is better)
Translates to: WGMPGSFPPGDT*IAASWAAYNCL
Trigger: AAGACAGTTATATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCAGGCATACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542241.5
CDS CCA 72 bp TGGGCAGCCAACAGCTGCTCTCGGAGGCTGGTCAGCTaGTTGATCATACCCATGAGTTGCCTTTCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: WAANSCSRRLVS*LIIPMSCLSFS
Trigger: TGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
ENST00000659413.1
CDS CAA 72 bp GCAGCCAACAGCTGCTCTCGGAGGCTGGTCAGCTGGTaGATCATACCCATGAGTTGCCTTTCTTTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: AANSCSRRLVSW*IIPMSCLSFSA
Trigger: AGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000537393.5
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
ENST00000659413.1
CDS CAA 72 bp GTATGCCTGGCAGCTTCCCTCCTGGAGATACCTGCATaGCAGCTAGCTGGGCAGCATATAACTGTCTTGCAG +
Preference number: 6 (lower is better)
Translates to: VCLAASLLEIPA*QLAGQHITVLQ
Trigger: CTGCAAGACAGTTATATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCAGGCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542241.5
CDS TCA 72 bp AATCTTGTTTCGGTCTGGTCCTTCTCGGCAGCCCACTaGGCAGAATGCAGCTCTACAATGAAGGCGCAAGAG +
Preference number: 6 (lower is better)
Translates to: NLVSVWSFSAAH*AECSSTMKAQE
Trigger: CTCTTGCGCCTTCATTGTAGAGCTGCATTCTGCTCAGTGGGCTGCCGAGAAGGACCAGACCGAAACAAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538083.1
CDS CAA 72 bp TGCTTCAAGGTGTCAACAACATCAGCTAAACTGCCCTaGCGCCGTTCAGGAGTTCCCAGGGCTGTACTAGAC +
Preference number: 6 (lower is better)
Translates to: CFKVSTTSAKLP*RRSGVPRAVLD
Trigger: GTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000441133.2
ENST00000451604.7
ENST00000536729.2
ENST00000537393.5
ENST00000538083.1
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
ENST00000659413.1
CDS CAA 90 bp ATTTTCCTCTGCTTCAAGGTGTCAACAACATCAGCTAAACTGCCCTaGCGCCGTTCAGGAGTTCCCAGGGCTGTACTAGACAAGGACTCG +
Preference number: 6 (lower is better)
Translates to: IFLCFKVSTTSAKLP*RRSGVPRAVLDKDS
Trigger: CGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000441133.2
ENST00000451604.7
ENST00000536729.2
ENST00000537393.5
ENST00000538083.1
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
ENST00000659413.1
CDS CCA 72 bp CCTATGGCCACAAGTCTCTTGCGTCAGCAGAGAAACTaGCTGAAATTCCTCAGAGTGAGGCTTGTTGGGAAA +
Preference number: 6 (lower is better)
Translates to: PMATSLLRQQRN*LKFLRVRLVGK
Trigger: TTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000538083.1
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
CDS CCA 72 bp GCAGGAACATATTTTTCATCATCTTTGGGTCACCAATaGCCAGCACAGCACCTGCCACATTTGGGGAGGCTT +
Preference number: 6 (lower is better)
Translates to: AGTYFSSSLGHQ*PAQHLPHLGRL
Trigger: AAGCCTCCCCAAATGTGGCAGGTGCTGTGCTGGCCATTGGTGACCCAAAGATGATGAAAAATATGTTCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000429944.6
ENST00000538905.1
ENST00000646273.1
ENST00000659413.1
CDS CCA 72 bp GCAGGAACATATTTTTCATCATCTTTGGGTCACCAATaGCCAGCACAGCACGCACCTTACCCGGTCTCGTTA +
Preference number: 6 (lower is better)
Translates to: AGTYFSSSLGHQ*PAQHAPYPVSL
Trigger: TAACGAGACCGGGTAAGGTGCGTGCTGTGCTGGCCATTGGTGACCCAAAGATGATGAAAAATATGTTCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446891.7
CDS CCA 72 bp GGCTTGTCCAAAACTTCTGAGGATCCTCCTGAAGTATaGCTCTACACCTTGGACCGTTTAAAAAGCCCGGTC +
Preference number: 6 (lower is better)
Translates to: GLSKTSEDPPEV*LYTLDRLKSPV
Trigger: GACCGGGCTTTTTAAACGGTCCAAGGTGTAGAGCCATACTTCAGGAGGATCCTCAGAAGTTTTGGACAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538905.1
CDS CAA 90 bp CATTGTATTGTGCTGAGAAGTGGGAGTCCTATGGCCACAAGTCTCTaGCGTCAGCAGAGAAACTGGCTGAAATTCCTCAGAGTGAGGCTT +
Preference number: 6 (lower is better)
Translates to: HCIVLRSGSPMATSL*RQQRNWLKFLRVRL
Trigger: AAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000538083.1
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
CDS TCA 72 bp AATCTGCCATGTATGGTAGAGAAGCGCTGGGAGAGCTaGATGGGCTCTAGAAACATGACCTGTAGCTATCAC +
Preference number: 6 (lower is better)
Translates to: NLPCMVEKRWES*MGSRNMTCSYH
Trigger: GTGATAGCTACAGGTCATGTTTCTAGAGCCCATTCAGCTCTCCCAGCGCTTCTCTACCATACATGGCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536629.5
CDS CCA 72 bp GAGAAACTGGCTGAAATTCCTCAGAGTGAGGCTTGTTaGGAAAACTCACATGCAAGGGAAGGTGAAAGGCTG +
Preference number: 6 (lower is better)
Translates to: EKLAEIPQSEAC*ENSHAREGERL
Trigger: CAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000538083.1
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
CDS CCA 72 bp ACAGTGGCTTCTTCAAAAGGGTACCTTGCTTTTGGGTaGTGGGCTGTTTGTGCTCTTGTCTGTGTGAATGCT +
Preference number: 6 (lower is better)
Translates to: TVASSKGYLAFG*WAVCALVCVNA
Trigger: AGCATTCACACAGACAAGAGCACAAACAGCCCACCACCCAAAAGCAAGGTACCCTTTTGAAGAAGCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536911.1
CDS CCA 72 bp CAAGACAGTGGCTTCTTCAAAAGGGTACCTTGCTTTTaGGTGGTGGGCTGTTTGTGCTCTTGTCTGTGTGAA +
Preference number: 6 (lower is better)
Translates to: QDSGFFKRVPCF*VVGCLCSCLCE
Trigger: TTCACACAGACAAGAGCACAAACAGCCCACCACCCAAAAGCAAGGTACCCTTTTGAAGAAGCCACTGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536911.1
CDS CAA 72 bp ACTTCTGAGGATCCTCCTGAAGTATGGCTCTACACCTaGGACCGTTTAAAAAGCCCGGTCTCGTTAATGCCT +
Preference number: 6 (lower is better)
Translates to: TSEDPPEVWLYT*DRLKSPVSLMP
Trigger: AGGCATTAACGAGACCGGGCTTTTTAAACGGTCCAAGGTGTAGAGCCATACTTCAGGAGGATCCTCAGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538905.1
CDS TCA 72 bp CCTTTGTCACAGCAGCCACCTATGATCGTCTCCAACTaGACCTGTCAAGTGAGTCCAAACCTTCTAAACCAA +
Preference number: 6 (lower is better)
Translates to: PLSQQPPMIVSN*TCQVSPNLLNQ
Trigger: TTGGTTTAGAAGGTTTGGACTCACTTGACAGGTTCAGTTGGAGACGATCATAGGTGGCTGCTGTGACAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381381.6
CDS GCA 72 bp TATGATCGTCTCCAACTGAACCAACAGGAGATAGTGTaGATTCTTCACACACGCATGCACACACACACACAC +
Preference number: 6 (lower is better)
Translates to: YDRLQLNQQEIV*ILHTRMHTHTH
Trigger: GTGTGTGTGTGTGTGCATGCGTGTGTGAAGAATGCACACTATCTCCTGTTGGTTCAGTTGGAGACGATCATA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441133.2
CDS CCA 72 bp GGCTTGTCCAAAACTTCTGAGGATCCTCCTGAAGTATaGCTCTACACCTTGGACCGTTTAAAAAGCCTTACC +
Preference number: 6 (lower is better)
Translates to: GLSKTSEDPPEV*LYTLDRLKSLT
Trigger: GGTAAGGCTTTTTAAACGGTCCAAGGTGTAGAGCCATACTTCAGGAGGATCCTCAGAAGTTTTGGACAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646273.1
ENST00000659413.1
CDS CAA 72 bp AATATGACTGCATCGCTAGTTCTTACTCACTTGTTCTaGTTGCTGCTTGGCCAGCTCCATTTGCTGACGCTG +
Preference number: 6 (lower is better)
Translates to: NMTASLVLTHLF*LLLGQLHLLTL
Trigger: CAGCGTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAGTGAGTAAGAACTAGCGATGCAGTCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659413.1
CDS TCA 72 bp AAAAGCACAATTTCCCTTTGTCACAGCAGCCACCTATaGTCGTCTCCAACTGAACCAACAGGAGATAGTGTG +
Preference number: 6 (lower is better)
Translates to: KSTISLCHSSHL*SSPTEPTGDSV
Trigger: CACACTATCTCCTGTTGGTTCAGTTGGAGACGATCATAGGTGGCTGCTGTGACAAAGGGAAATTGTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441133.2
CDS CCA 72 bp GGCTTGTCCAAAACTTCTGAGGATCCTCCTGAAGTATaGCTCTACACCTTGGACCGTTTAAAAAGCTCAGTT +
Preference number: 6 (lower is better)
Translates to: GLSKTSEDPPEV*LYTLDRLKSSV
Trigger: AACTGAGCTTTTTAAACGGTCCAAGGTGTAGAGCCATACTTCAGGAGGATCCTCAGAAGTTTTGGACAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429944.6
CDS GCA 72 bp AGCAAATTGATTTTGTGTTGTTGCTGTAGAAGCTGCTaGTGCTGTCTTGCAATCTGTAGCTATCACCAGGGA +
Preference number: 6 (lower is better)
Translates to: SKLILCCCCRSC*CCLAICSYHQG
Trigger: TCCCTGGTGATAGCTACAGATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACACAAAATCAATTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535530.5
CDS CAA 90 bp CCTACCCAGTGCAGTGCCAGAATTCTCTGTTCAGCTTTCAGAATCTaGTCAACAGATTCAAACAGGAATCATGTCATCAGCAAGAGGAAA +
Preference number: 6 (lower is better)
Translates to: PTQCSARILCSAFRI*STDSNRNHVISKRK
Trigger: TTTCCTCTTGCTGATGACATGATTCCTGTTTGAATCTGTTGACAAGATTCTGAAAGCTGAACAGAGAATTCTGGCACTGCACTGGGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446891.7
ENST00000536729.2
ENST00000646273.1
ENST00000659413.1
CDS TCA 72 bp ATAACTTTATTGCCATCAACTTCCATTGTATTGTGCTaGGAAGTGGGAGTCCTATGGCCACAAGTCTCTTGC +
Preference number: 6 (lower is better)
Translates to: ITLLPSTSIVLC*EVGVLWPQVSC
Trigger: GCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATAAAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367206.7
ENST00000381381.6
ENST00000451604.7
ENST00000538083.1
ENST00000541847.5
ENST00000545921.5
ENST00000646273.1
CDS GCA 72 bp AAATTGATTTTGTGTTGTTGCTGTAGAAGCTGCTGCTaGTGTCTTGCAATCTGTAGCTATCACCAGGGATCT +
Preference number: 6 (lower is better)
Translates to: KLILCCCCRSCC*CLAICSYHQGS
Trigger: AGATCCCTGGTGATAGCTACAGATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACACAAAATCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535530.5
CDS CAA 72 bp TGCAGTGCCAGAATTCTCTGTTCAGCTTTCAGAATCTaGTCAACAGATTCAAACAGGAATCATGTCATCAGC +
Preference number: 6 (lower is better)
Translates to: CSARILCSAFRI*STDSNRNHVIS
Trigger: GCTGATGACATGATTCCTGTTTGAATCTGTTGACAAGATTCTGAAAGCTGAACAGAGAATTCTGGCACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446891.7
ENST00000536729.2
ENST00000646273.1
ENST00000659413.1
CDS GCA 72 bp ATTGCCAAACATCGGCATTTATTTAATCAGCGCTATTaGCTAAAAGTCTACTCACTTATGGCATTTTCCCTT +
Preference number: 6 (lower is better)
Translates to: IAKHRHLFNQRY*LKVYSLMAFSL
Trigger: AAGGGAAAATGCCATAAGTGAGTAGACTTTTAGGCAATAGCGCTGATTAAATAAATGCCGATGTTTGGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536850.1