Pregenerated sensors for SOX3 (Homo sapiens)
Ensembl gene IDs: ENSG00000134595Ensembl transcript IDs: ENST00000370536.5
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAACCACGAGGAAAACAGACGCGACACGACTGGGGGCGTAGGCGTTaGAGTTCTCCAGCTGGCCTCACCCGATACTATGTTTCTCCCATT | + |
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Preference number: 1 (lower is better) Translates to: KPRGKQTRHDWGRRR*SSPAGLTRYYVSPI Trigger: AATGGGAGAAACATAGTATCGGGTGAGGCCAGCTGGAGAACTGCAACGCCTACGCCCCCAGTCGTGTCGCGTCTGTTTTCCTCGTGGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| 3UTR CAA 90 bp | GGCGGCGAGGCGGGAGACACACGCACACCTGGCTATAAATTAACATaGGCTTTAGCTGCCGCGCTGCTTGGAGCGGTCAGCGCCCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: GGEAGDTRTPGYKLT*ALAAALLGAVSAPK Trigger: TTTTGGGGCGCTGACCGCTCCAAGCAGCGCGGCAGCTAAAGCCAATGTTAATTTATAGCCAGGTGTGCGTGTGTCTCCCGCCTCGCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| 3UTR-3UTR CCA 90 bp | AGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGCTGTCCCGCGGGGTGGGGAACAAGGGTaGACGAGCGCAGGCCGGTGC | + |
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Preference number: 2 (lower is better) Translates to: RSRQKSPTQHDWTEAVPRGGEQG*TSAGRC Trigger: GCACCGGCCTGCGCTCGTCCACCCTTGTTCCCCACC...CCGCGGGACAGCTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| 3UTR-3UTR CCA 90 bp | AGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGCTGTCCCGCGGCAAGGCGTCCCAACTTaGGGGTGCGGGGCGGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: RSRQKSPTQHDWTEAVPRQGVPT*GCGAGV Trigger: CACTCCCGCCCCGCACCCCCAAGTTGGGACGCCTTG...CCGCGGGACAGCTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| 3UTR-3UTR CCA 90 bp | ATATCAAACAGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGCTAGCTGCCGCGCTGCTTaGAGCGGTCAGCGCCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: ISNRSRQKSPTQHDWTEASCRAA*SGQRPK Trigger: TTTGGGGCGCTGACCGCTCCAAGCAGCGCGGCAGCT...AGCTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| 3UTR-3UTR CCA 90 bp | AAATATCAAACAGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGTTGCAGTTCTCCAGCTaGCCTCACCCGATACTATGT | + |
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Preference number: 2 (lower is better) Translates to: KYQTDHGRNHQLNMIGQKLQFSS*PHPILC Trigger: ACATAGTATCGGGTGAGGCCAGCTGGAGAACTGCAA...CTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTGATATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| 3UTR GCA 72 bp | GGAAAACAGACGCGACACGACTGGGGGCGTAGGCGTTaGAGTTCTCCAGCTGGCCTCACCCGATACTATGTT | + |
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Preference number: 3 (lower is better) Translates to: GKQTRHDWGRRR*SSPAGLTRYYV Trigger: AACATAGTATCGGGTGAGGCCAGCTGGAGAACTGCAACGCCTACGCCCCCAGTCGTGTCGCGTCTGTTTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| 3UTR CCA 72 bp | AACAGATCACGGCAGAAATCACCAACTCAACATGATTaGACAGAAGCTGTCCCGCGGCCAGGGGCGGCGAGG | + |
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Preference number: 3 (lower is better) Translates to: NRSRQKSPTQHD*TEAVPRPGAAR Trigger: CCTCGCCGCCCCTGGCCGCGGGACAGCTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| 3UTR TCA 72 bp | ATCAAACAGATCACGGCAGAAATCACCAACTCAACATaGTTGGACAGAAGCTGTCCCGCGGCCAGGGGCGGC | + |
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Preference number: 3 (lower is better) Translates to: IKQITAEITNST*LDRSCPAARGG Trigger: GCCGCCCCTGGCCGCGGGACAGCTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | ACGCGACACGACTGGGGGCGTAGGCGTTGCAGTTCTCCAGCTGGCCTCACCCGACGGGCGGCGGCGAGCTaGGCTCAGACTTCACTACCG | + |
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Preference number: 4 (lower is better) Translates to: TRHDWGRRRCSSPAGLTRRAAAS*AQTSLP Trigger: CGGTAGTGAAGTCTGAGCCCAGCTCGCCGCCGCCCG...TCGGGTGAGGCCAGCTGGAGAACTGCAACGCCTACGCCCCCAGTCGTGTCGCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR GCA 90 bp | ACGCGACACGACTGGGGGCGTAGGCGTTGCAGTTCTCCAGCTGGCCTCACCCGAGTTCGCGCCGCCGGCTaGGTTCGCACTACTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: TRHDWGRRRCSSPAGLTRVRAAG*VRTTLA Trigger: GGCAAGAGTAGTGCGAACGCAGCCGGCGGCGCGAAC...TCGGGTGAGGCCAGCTGGAGAACTGCAACGCCTACGCCCCCAGTCGTGTCGCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR GCA 90 bp | CGAGGAAAACAGACGCGACACGACTGGGGGCGTAGGCGTTGCAGTTCTCCAGCTTGCTGGTGCACGCCGTaGAGGCGACCGCCGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RGKQTRHDWGRRRCSSPACWCTP*RRPPGS Trigger: GCTGCCCGGCGGTCGCCTGCACGGCGTGCACCAGCA...AGCTGGAGAACTGCAACGCCTACGCCCCCAGTCGTGTCGCGTCTGTTTTCCTCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | ACGCGACACGACTGGGGGCGTAGGCGTTGCAGTTCTCCAGCTGGCCTCACCCGAGCCGGTGCTCAGATGTaGGTCAGCGGCACCGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: TRHDWGRRRCSSPAGLTRAGAQM*VSGTVP Trigger: CGGAACGGTGCCGCTGACCCACATCTGAGCACCGGC...TCGGGTGAGGCCAGCTGGAGAACTGCAACGCCTACGCCCCCAGTCGTGTCGCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | ACGCGACACGACTGGGGGCGTAGGCGTTGCAGTTCTCCAGCTGGCCTCACCCGAAGCTGCCGCGCTGCTTaGAGCGGTCAGCGCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TRHDWGRRRCSSPAGLTRSCRAA*SGQRPK Trigger: TTTGGGGCGCTGACCGCTCCAAGCAGCGCGGCAGCT...TCGGGTGAGGCCAGCTGGAGAACTGCAACGCCTACGCCCCCAGTCGTGTCGCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | AACAGTCCCAGGCAAGCAAAGCTAAACAAGGCGTCCCAACTTGGGGGTGCGGGGGAGCTTGGGGGCCTGTaGGCCAGCGAGTCCGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: NSPRQAKLNKASQLGGAGELGGL*ASESGG Trigger: CCCGCCGGACTCGCTGGCCCACAGGCCCCCAAGCTC...CCCCGCACCCCCAAGTTGGGACGCCTTGTTTAGCTTTGCTTGCCTGGGACTGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | ACGCGACACGACTGGGGGCGTAGGCGTTGCAGTTCTCCAGCTGGCCTCACCCGAACGGTGAAAAGGCCCTaGGACTCCGTCGGAGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: TRHDWGRRRCSSPAGLTRTVKRP*DSVGAE Trigger: CTCCGCTCCGACGGAGTCCCAGGGCCTTTTCACCGT...TCGGGTGAGGCCAGCTGGAGAACTGCAACGCCTACGCCCCCAGTCGTGTCGCGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR GCA 90 bp | AACAGTCCCAGGCAAGCAAAGCTAAACAAGGCGTCCCAACTTGGGGGTGCGGGGCGCACTACTCTTGCCTaGGCCTCCCGGGGCTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: NSPRQAKLNKASQLGGAGRTTLA*ASRGCG Trigger: CCCGCAGCCCCGGGAGGCGCAGGCAAGAGTAGTGCG...CCCCGCACCCCCAAGTTGGGACGCCTTGTTTAGCTTTGCTTGCCTGGGACTGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR TCA 90 bp | AACAGTCCCAGGCAAGCAAAGCTAAACAAGGCGTCCCAACTTGGGGGTGCGGGGCTGGAGCGGCCACGGTaGAAAGGCCCTGGGACTCCG | + |
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Preference number: 4 (lower is better) Translates to: NSPRQAKLNKASQLGGAGLERPR*KGPGTP Trigger: CGGAGTCCCAGGGCCTTTTCACCGTGGCCGCTCCAG...CCCCGCACCCCCAAGTTGGGACGCCTTGTTTAGCTTTGCTTGCCTGGGACTGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR TCA 90 bp | ACTGGGGGCGTAGGCGTTGCAGTTCTCCAGCTGGCCTCACCCGATACTATGTTTGCGGCACCGTTCCGTTaGCTGCAGTCCCGGCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TGGVGVAVLQLASPDTMFAAPFR*LQSRRP Trigger: AGGGCGCCGGGACTGCAGTCAACGGAACGGTGCCGC...AAACATAGTATCGGGTGAGGCCAGCTGGAGAACTGCAACGCCTACGCCCCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR GCA 90 bp | GACACGACTGGGGGCGTAGGCGTTGCAGTTCTCCAGCTGGCCTCACCCGATACTCACCGTTCCGTTGACTaGAGTCCCGGCGCCCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: DTTGGVGVAVLQLASPDTHRSVD*SPGALV Trigger: TACCAGGGCGCCGGGACTGCAGTCAACGGAACGGTG...AGTATCGGGTGAGGCCAGCTGGAGAACTGCAACGCCTACGCCCCCAGTCGTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR GCA 90 bp | AACAGTCCCAGGCAAGCAAAGCTAAACAAGGCGTCCCAACTTGGGGGTGCGGGGCGTTCGCACTACTCTTaGCTGCGCCTCCCGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NSPRQAKLNKASQLGGAGRSHYS*LRLPGL Trigger: CAGCCCCGGGAGGCGCAGGCAAGAGTAGTGCGAACG...CCCCGCACCCCCAAGTTGGGACGCCTTGTTTAGCTTTGCTTGCCTGGGACTGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | ATAACACAGCGATTCCCAGCCTACAAAGGTGAAAGGAGCAGCGGCGTGGGGCAAGAGAGTGCGATGCGATaGCGGGCGGCGGCGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ITQRFPAYKGERSSGVGQESAMR*RAAASW Trigger: CCAGCTCGCCGCCGCCCGCCATCGCATCGCACTCTC...TTGCCCCACGCCGCTGCTCCTTTCACCTTTGTAGGCTGGGAATCGCTGTGTTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR GCA 90 bp | AAACCCGACAGCTACAGCAAAACTTTCAGCCCTCCCCATCATCGGTACAAGGCAGCGGCGGGCTGCTCATaGTCGGGGGCTGCGCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: KPDSYSKTFSPPHHRYKAAAGCS*SGAARS Trigger: GCTACGCGCAGCCCCCGAGCATGAGCAGCCCGCCGC...TGCCTTGTACCGATGATGGGGAGGGCTGAAAGTTTTGCTGTAGCTGTCGGGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR GCA 90 bp | CCCGACAGCTACAGCAAAACTTTCAGCCCTCCCCATCATCGGTACAAGGCAACAGCGCTGAGAGTGCGATaGGATGGCGGGCGGCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: PDSYSKTFSPPHHRYKATALRVR*DGGRRR Trigger: TCGCCGCCGCCCGCCATCGCATCGCACTCTCAGCGC...TGTTGCCTTGTACCGATGATGGGGAGGGCTGAAAGTTTTGCTGTAGCTGTCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | CGCACACCTGGCTATAAATTAACATTGGCTTTAGCTGCCGCGCTGCTTGGAGCGCGTCGGAGCGGAGCTTaGGGGCCTGTGGGCCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: RTPGYKLTLALAAALLGARRSGA*GPVGQR Trigger: TCGCTGGCCCACAGGCCCCCAAGCTCCGCTCCGACG...CGCTCCAAGCAGCGCGGCAGCTAAAGCCAATGTTAATTTATAGCCAGGTGTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | GGCTATAAATTAACATTGGCTTTAGCTGCCGCGCTGCTTGGAGCGGTCAGCGCCCAAGGCGTCCCAACTTaGGGGTGCGGGGCGGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: GYKLTLALAAALLGAVSAQGVPT*GCGAGV Trigger: CACTCCCGCCCCGCACCCCCAAGTTGGGACGCCTTG...GGCGCTGACCGCTCCAAGCAGCGCGGCAGCTAAAGCCAATGTTAATTTATAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR TCA 90 bp | GGAGACACACGCACACCTGGCTATAAATTAACATTGGCTTTAGCTGCCGCGCTGCCGAGGCACGCGCGCTaGGAGTGCGATGCGATGGCG | + |
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Preference number: 4 (lower is better) Translates to: GDTRTPGYKLTLALAAALPRHAR*ECDAMA Trigger: CGCCATCGCATCGCACTCTCAGCGCGCGTGCCTCGG...CAGCGCGGCAGCTAAAGCCAATGTTAATTTATAGCCAGGTGTGCGTGTGTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR GCA 90 bp | CGAGGAAAACAGACGCGACACGACTGGGGGCGTAGGCGTTGCAGTTCTCCAGCTCAGAAGGCTGTACATTaGCGGGGCGGGAAGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: RGKQTRHDWGRRRCSSPAQKAVH*RGGKKV Trigger: CACCTTCTTCCCGCCCCGGCAATGTACAGCCTTCTG...AGCTGGAGAACTGCAACGCCTACGCCCCCAGTCGTGTCGCGTCTGTTTTCCTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | CGCACACCTGGCTATAAATTAACATTGGCTTTAGCTGCCGCGCTGCTTGGAGCGAGGCGCTCCCGGGGCTaGAGCGGCCACGGTGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: RTPGYKLTLALAAALLGARRSRG*SGHGEK Trigger: CTTTTCACCGTGGCCGCTCCAGCCCCGGGAGCGCCT...CGCTCCAAGCAGCGCGGCAGCTAAAGCCAATGTTAATTTATAGCCAGGTGTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | CGCACACCTGGCTATAAATTAACATTGGCTTTAGCTGCCGCGCTGCTTGGAGCGTACGTGTCCAGGCGCTaGCCCACGCCCACCGGACTG | + |
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Preference number: 4 (lower is better) Translates to: RTPGYKLTLALAAALLGAYVSRR*PTPTGL Trigger: CAGTCCGGTGGGCGTGGGCCAGCGCCTGGACACGTA...CGCTCCAAGCAGCGCGGCAGCTAAAGCCAATGTTAATTTATAGCCAGGTGTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | CCCGACAGCTACAGCAAAACTTTCAGCCCTCCCCATCATCGGTACAAGGCAACAGCCGGGCGGCATCATTaGGCTGTACTGCAGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: PDSYSKTFSPPHHRYKATAGRHH*AVLQAG Trigger: GCCGGCCTGCAGTACAGCCCAATGATGCCGCCCGGC...TGTTGCCTTGTACCGATGATGGGGAGGGCTGAAAGTTTTGCTGTAGCTGTCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | CGCACACCTGGCTATAAATTAACATTGGCTTTAGCTGCCGCGCTGCTTGGAGCGGGTGGGGAACAAGGGTaGACGAGCGCAGGCCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: RTPGYKLTLALAAALLGAGGEQG*TSAGRC Trigger: GCACCGGCCTGCGCTCGTCCACCCTTGTTCCCCACC...CGCTCCAAGCAGCGCGGCAGCTAAAGCCAATGTTAATTTATAGCCAGGTGTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | GGAGACACACGCACACCTGGCTATAAATTAACATTGGCTTTAGCTGCCGCGCTGGAAGGTGCGCCAGCGTaGCGGGAGGAGAAGGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: GDTRTPGYKLTLALAAALEGAPA*REEKAL Trigger: GAGCGCCTTCTCCTCCCGCCACGCTGGCGCACCTTC...CAGCGCGGCAGCTAAAGCCAATGTTAATTTATAGCCAGGTGTGCGTGTGTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | AAACCCGACAGCTACAGCAAAACTTTCAGCCCTCCCCATCATCGGTACAAGGCAGCGAGTACGCGCCGTTaGCCCAGCCGTTCACGTGCG | + |
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Preference number: 4 (lower is better) Translates to: KPDSYSKTFSPPHHRYKAASTRR*PSRSRA Trigger: CGCACGTGAACGGCTGGGCCAACGGCGCGTACTCGC...TGCCTTGTACCGATGATGGGGAGGGCTGAAAGTTTTGCTGTAGCTGTCGGGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | CCCGACAGCTACAGCAAAACTTTCAGCCCTCCCCATCATCGGTACAAGGCAACATCACTACCGAGCCCATaGGGCCCAGGCTCATGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PDSYSKTFSPPHHRYKATSLPSP*GPGSWR Trigger: CCGCCATGAGCCTGGGCCCCATGGGCTCGGTAGTGA...TGTTGCCTTGTACCGATGATGGGGAGGGCTGAAAGTTTTGCTGTAGCTGTCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR GCA 90 bp | CAGCAAAACTTTCAGCCCTCCCCATCATCGGTACAAGGCAACAGTCCCAGGCAATGGGGGCGTAGGCGTTaGAGTTCTCCAGCTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QQNFQPSPSSVQGNSPRQWGRRR*SSPAGL Trigger: GAGGCCAGCTGGAGAACTGCAACGCCTACGCCCCCA...TTGCCTGGGACTGTTGCCTTGTACCGATGATGGGGAGGGCTGAAAGTTTTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR GCA 90 bp | CAAACAGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGCTGTCCGGGGCGGGAAGAAGGTaGGCCAGCGTGGCGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: QTDHGRNHQLNMIGQKLSGAGRR*ASVAGG Trigger: TCCTCCCGCCACGCTGGCGCACCTTCTTCCCGCCCC...GGACAGCTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | CCCGACAGCTACAGCAAAACTTTCAGCCCTCCCCATCATCGGTACAAGGCAACACGTTTCACACGGTCCTaGTCTGTACCCCCGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: PDSYSKTFSPPHHRYKATRFTRS*SVPPPP Trigger: AGGTGGCGGGGGTACAGACCAGGACCGTGTGAAACG...TGTTGCCTTGTACCGATGATGGGGAGGGCTGAAAGTTTTGCTGTAGCTGTCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | GGAGACACACGCACACCTGGCTATAAATTAACATTGGCTTTAGCTGCCGCGCTGCGCGTCCCCGCCGGGTaGCAGGTACATGCTGATCAT | + |
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Preference number: 4 (lower is better) Translates to: GDTRTPGYKLTLALAAALRVPAG*QVHADH Trigger: ATGATCAGCATGTACCTGCCACCCGGCGGGGACGCG...CAGCGCGGCAGCTAAAGCCAATGTTAATTTATAGCCAGGTGTGCGTGTGTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| 3UTR CAA 72 bp | GCGGGAGACACACGCACACCTGGCTATAAATTAACATaGGCTTTAGCTGCCGCGCTGCTTGGAGCGGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: AGDTRTPGYKLT*ALAAALLGAVS Trigger: GCTGACCGCTCCAAGCAGCGCGGCAGCTAAAGCCAATGTTAATTTATAGCCAGGTGTGCGTGTGTCTCCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | AACAGTCCCAGGCAAGCAAAGCTAAACAAGGCGTCCCAACTTGGGGGTGCGGGGTTGCAGTTCTCCAGCTaGCCTCACCCGATACTATGT | + |
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Preference number: 4 (lower is better) Translates to: NSPRQAKLNKASQLGGAGLQFSS*PHPILC Trigger: ACATAGTATCGGGTGAGGCCAGCTGGAGAACTGCAA...CCCCGCACCCCCAAGTTGGGACGCCTTGTTTAGCTTTGCTTGCCTGGGACTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR GCA 90 bp | CAAACAGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGCTGTCCGCCCAGCCGTTCACGTaGGTGTACGTGTCCAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: QTDHGRNHQLNMIGQKLSAQPFT*VYVSRR Trigger: GCGCCTGGACACGTACACGCACGTGAACGGCTGGGC...GGACAGCTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR TCA 90 bp | ACTGGGGGCGTAGGCGTTGCAGTTCTCCAGCTGGCCTCACCCGATACTATGTTTATCACCAACTCAACATaGTTGGACAGAAGCTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: TGGVGVAVLQLASPDTMFITNST*LDRSCP Trigger: GGGACAGCTTCTGTCCAATCATGTTGAGTTGGTGAT...AAACATAGTATCGGGTGAGGCCAGCTGGAGAACTGCAACGCCTACGCCCCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR GCA 90 bp | AAAACTTTCAGCCCTCCCCATCATCGGTACAAGGCAACAGTCCCAGGCAAGCAAGGATACTCCTTCATGTaGACGGCGCGAAGTCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: KTFSPPHHRYKATVPGKQGYSFM*TARSRL Trigger: CAAGCGACTTCGCGCCGTGCACATGAAGGAGTATCC...TTGCTTGCCTGGGACTGTTGCCTTGTACCGATGATGGGGAGGGCTGAAAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR GCA 90 bp | ATAACACAGCGATTCCCAGCCTACAAAGGTGAAAGGAGCAGCGGCGTGGGGCAAGTAGGCTTATCAAAATaGTCCGCGCCAAATCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ITQRFPAYKGERSSGVGQVGLSK*SAPNQQ Trigger: CTGCTGATTTGGCGCGGAGCATTTTGATAAGCCTAC...TTGCCCCACGCCGCTGCTCCTTTCACCTTTGTAGGCTGGGAATCGCTGTGTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | TCAAACAGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGCTGTCTGCCCGCCGCTTGTGTaGGTGTCCCTACGGGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SNRSRQKSPTQHDWTEAVCPPLV*VSLRGS Trigger: AGAACCCCGTAGGGACACCCACACAAGCGGCGGGCA...GACAGCTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CCA 90 bp | AAAACTTTCAGCCCTCCCCATCATCGGTACAAGGCAACAGTCCCAGGCAAGCAACCAACTCAACATGATTaGACAGAAGCTGTCCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KTFSPPHHRYKATVPGKQPTQHD*TEAVPR Trigger: CCGCGGGACAGCTTCTGTCCAATCATGTTGAGTTGG...TTGCTTGCCTGGGACTGTTGCCTTGTACCGATGATGGGGAGGGCTGAAAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS-3UTR GCA 90 bp | AAATATCAAACAGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGACGAGCGCAGGCCGGTaGTCAGATGTGGGTCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KYQTDHGRNHQLNMIGQKTSAGR*SDVGQR Trigger: CCGCTGACCCACATCTGAGCACCGGCCTGCGCTCGT...CTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTGATATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS-3UTR CCA 90 bp | ATATCAAACAGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGCTCAGACGCGACACGACTaGGGGCGTAGGCGTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISNRSRQKSPTQHDWTEAQTRHD*GRRRCS Trigger: ACTGCAACGCCTACGCCCCCAGTCGTGTCGCGTCTG...AGCTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS-3UTR GCA 90 bp | TCAAACAGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGCTGTCAACATTGGCTTTAGCTaGCGCGCTGCTTGGAGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SNRSRQKSPTQHDWTEAVNIGFS*RAAWSG Trigger: ACCGCTCCAAGCAGCGCGGCAGCTAAAGCCAATGTT...GACAGCTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS-3UTR CCA 90 bp | AAATATCAAACAGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGGAGGCAGGAGGCCGCTaGGCAGGGAGTACTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KYQTDHGRNHQLNMIGQKEAGGR*AGSTYL Trigger: AAGATAAGTACTCCCTGCCCAGCGGCCTCCTGCCTC...CTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTGATATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS-3UTR TCA 90 bp | AAATATCAAACAGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGTCCCTACGGGGTTCTTaGGTTCAGTCTCCAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KYQTDHGRNHQLNMIGQKSLRGS*VQSPEG Trigger: GCCTTCTGGAGACTGAACTCAAGAACCCCGTAGGGA...CTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTGATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS GCA 90 bp | TCACGTGCGTGTACGTGTCCAGGCGCTGGCCCACGCCCACCGGACTaGTGGCGGCAGCGGCTGCGGCCGCGGCAGCGGCGGCGGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SRACTCPGAGPRPPD*WRQRLRPRQRRRRP Trigger: CGGCCGCCGCCGCCGCTGCCGCGGCCGCAGCCGCTGCCGCCAGCAGTCCGGTGGGCGTGGGCCAGCGCCTGGACACGTACACGCACGTGA 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS GCA 90 bp | TGCCGCCGCCCGAGTTCGCGCCGCCGGCTGCGTTCGCACTACTCTTaGCTGCGCCTCCCGGGGCTGCGGGGCCGCCGGTGCCCGCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CRRPSSRRRLRSHYS*LRLPGLRGRRCPPL Trigger: AAGCGGCGGGCACCGGCGGCCCCGCAGCCCCGGGAGGCGCAGGCAAGAGTAGTGCGAACGCAGCCGGCGGCGCGAACTCGGGCGGCGGCA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS GCA 90 bp | GCCGCCCGAGTTCGCGCCGCCGGCTGCGTTCGCACTACTCTTGCCTaGGCCTCCCGGGGCTGCGGGGCCGCCGGTGCCCGCCGCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AARVRAAGCVRTTLA*ASRGCGAAGARRLC Trigger: ACACAAGCGGCGGGCACCGGCGGCCCCGCAGCCCCGGGAGGCGCAGGCAAGAGTAGTGCGAACGCAGCCGGCGGCGCGAACTCGGGCGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS GCA 90 bp | GCTCGCACCACCGCTGCTGCCGCCGCCCGAGTTCGCGCCGCCGGCTaGGTTCGCACTACTCTTGCCTGCGCCTCCCGGGGCTGCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARTTAAAAARVRAAG*VRTTLACASRGCGA Trigger: GGCCCCGCAGCCCCGGGAGGCGCAGGCAAGAGTAGTGCGAACGCAGCCGGCGGCGCGAACTCGGGCGGCGGCAGCAGCGGTGGTGCGAGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS GCA 90 bp | GCCGCCGGCTGCGTTCGCACTACTCTTGCCTGCGCCTCCCGGGGCTaGGGGGCCGCCGGTGCCCGCCGCTTGTGTGGGTGTCCCTACGGG | + |
|
Preference number: 5 (lower is better) Translates to: AAGCVRTTLACASRG*GAAGARRLCGCPYG Trigger: CCCGTAGGGACACCCACACAAGCGGCGGGCACCGGCGGCCCCGCAGCCCCGGGAGGCGCAGGCAAGAGTAGTGCGAACGCAGCCGGCGGC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS GCA 90 bp | CACGGTCCTGGTCTGTACCCCCGCCACCTCCGCTCGCACCACCGCTaGTGCCGCCGCCCGAGTTCGCGCCGCCGGCTGCGTTCGCACTAC | + |
|
Preference number: 5 (lower is better) Translates to: HGPGLYPRHLRSHHR*CRRPSSRRRLRSHY Trigger: GTAGTGCGAACGCAGCCGGCGGCGCGAACTCGGGCGGCGGCAGCAGCGGTGGTGCGAGCGGAGGTGGCGGGGGTACAGACCAGGACCGTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS CCA 90 bp | AAGAAGGTGCGCCAGCGTGGCGGGAGGAGAAGGCGCTCCCGGGGCTaGAGCGGCCACGGTGAAAAGGCCCTGGGACTCCGTCGGAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: KKVRQRGGRRRRSRG*SGHGEKALGLRRSG Trigger: TCCGCTCCGACGGAGTCCCAGGGCCTTTTCACCGTGGCCGCTCCAGCCCCGGGAGCGCCTTCTCCTCCCGCCACGCTGGCGCACCTTCTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS CCA 90 bp | GGCACGCGCGCTGAGAGTGCGATGCGATGGCGGGCGGCGGCGAGCTaGGCTCAGACTTCACTACCGAGCCCATGGGGCCCAGGCTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GTRAESAMRWRAAAS*AQTSLPSPWGPGSW Trigger: CCATGAGCCTGGGCCCCATGGGCTCGGTAGTGAAGTCTGAGCCCAGCTCGCCGCCGCCCGCCATCGCATCGCACTCTCAGCGCGCGTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS GCA 90 bp | GCAGGCCGGTGCTCAGATGTGGGTCAGCGGCACCGTTCCGTTGACTaGAGTCCCGGCGCCCTGGTAGTGCTGGTGCACGCCGTGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGRCSDVGQRHRSVD*SPGALVVLVHAVQA Trigger: CGCCTGCACGGCGTGCACCAGCACTACCAGGGCGCCGGGACTGCAGTCAACGGAACGGTGCCGCTGACCCACATCTGAGCACCGGCCTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS CCA 90 bp | GGGGTGGGGAACAAGGGTGGACGAGCGCAGGCCGGTGCTCAGATGTaGGTCAGCGGCACCGTTCCGTTGACTGCAGTCCCGGCGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GVGNKGGRAQAGAQM*VSGTVPLTAVPAPW Trigger: CCAGGGCGCCGGGACTGCAGTCAACGGAACGGTGCCGCTGACCCACATCTGAGCACCGGCCTGCGCTCGTCCACCCTTGTTCCCCACCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS TCA 90 bp | GAGCGCAGGCCGGTGCTCAGATGTGGGTCAGCGGCACCGTTCCGTTaGCTGCAGTCCCGGCGCCCTGGTAGTGCTGGTGCACGCCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ERRPVLRCGSAAPFR*LQSRRPGSAGARRA Trigger: TGCACGGCGTGCACCAGCACTACCAGGGCGCCGGGACTGCAGTCAACGGAACGGTGCCGCTGACCCACATCTGAGCACCGGCCTGCGCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS GCA 90 bp | AGTTCAGTCTCCAGAAGGCTGTACATTGCCGGGGCGGGAAGAAGGTaGGCCAGCGTGGCGGGAGGAGAAGGCGCTCCCGGGGCTGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSVSRRLYIAGAGRR*ASVAGGEGAPGAGA Trigger: CGCTCCAGCCCCGGGAGCGCCTTCTCCTCCCGCCACGCTGGCGCACCTTCTTCCCGCCCCGGCAATGTACAGCCTTCTGGAGACTGAACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS-3UTR CAA 90 bp | CGAGGAAAACAGACGCGACACGACTGGGGGCGTAGGCGTTGCAGTTCTCCAGCTCGCCGGGCGGCATCATaGGGCTGTACTGCAGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RGKQTRHDWGRRRCSSPARRAAS*GCTAGR Trigger: CCGGCCTGCAGTACAGCCCAATGATGCCGCCCGGCG...AGCTGGAGAACTGCAACGCCTACGCCCCCAGTCGTGTCGCGTCTGTTTTCCTCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS TCA 90 bp | GGCCGCCGGTGCCCGCCGCTTGTGTGGGTGTCCCTACGGGGTTCTTaGGTTCAGTCTCCAGAAGGCTGTACATTGCCGGGGCGGGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GRRCPPLVWVSLRGS*VQSPEGCTLPGREE Trigger: TTCTTCCCGCCCCGGCAATGTACAGCCTTCTGGAGACTGAACTCAAGAACCCCGTAGGGACACCCACACAAGCGGCGGGCACCGGCGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS GCA 90 bp | GCCTGTGGGCCAGCGAGTCCGGCGGGAAGGGTAGGCTTATCAAAATaGTCCGCGCCAAATCAGCAGGAACCCGCGGGCTTCTCGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: ACGPASPAGRVGLSK*SAPNQQEPAGFSHL Trigger: CAGGTGCGAGAAGCCCGCGGGTTCCTGCTGATTTGGCGCGGAGCATTTTGATAAGCCTACCCTTCCCGCCGGACTCGCTGGCCCACAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS-3UTR CAA 90 bp | ACTGGGGGCGTAGGCGTTGCAGTTCTCCAGCTGGCCTCACCCGATACTATGTTTGCCGGTGCCCGCCGCTaGTGTGGGTGTCCCTACGGG | + |
|
Preference number: 5 (lower is better) Translates to: TGGVGVAVLQLASPDTMFAGARR*CGCPYG Trigger: CCCGTAGGGACACCCACACAAGCGGCGGGCACCGGC...AAACATAGTATCGGGTGAGGCCAGCTGGAGAACTGCAACGCCTACGCCCCCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CAA 90 bp | AACAGTCCCAGGCAAGCAAAGCTAAACAAGGCGTCCCAACTTGGGGGTGCGGGGGCGTTCGCACTACTCTaGCCTGCGCCTCCCGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSPRQAKLNKASQLGGAGAFALL*PAPPGA Trigger: AGCCCCGGGAGGCGCAGGCAAGAGTAGTGCGAACGC...CCCCGCACCCCCAAGTTGGGACGCCTTGTTTAGCTTTGCTTGCCTGGGACTGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS GCA 90 bp | TGTCCCTACGGGGTTCTTGAGTTCAGTCTCCAGAAGGCTGTACATTaGCGGGGCGGGAAGAAGGTGCGCCAGCGTGGCGGGAGGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CPYGVLEFSLQKAVH*RGGKKVRQRGGRRR Trigger: CCTTCTCCTCCCGCCACGCTGGCGCACCTTCTTCCCGCCCCGGCAATGTACAGCCTTCTGGAGACTGAACTCAAGAACCCCGTAGGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CAA 90 bp | GACACGACTGGGGGCGTAGGCGTTGCAGTTCTCCAGCTGGCCTCACCCGATACTCCAGAAGGCTGTACATaGCCGGGGCGGGAAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: DTTGGVGVAVLQLASPDTPEGCT*PGREEG Trigger: ACCTTCTTCCCGCCCCGGCAATGTACAGCCTTCTGG...AGTATCGGGTGAGGCCAGCTGGAGAACTGCAACGCCTACGCCCCCAGTCGTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CAA 90 bp | AGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGCTGTCCCGCGGAGCGGCACCGTTCCGTaGACTGCAGTCCCGGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RSRQKSPTQHDWTEAVPRSGTVP*TAVPAP Trigger: GGGCGCCGGGACTGCAGTCAACGGAACGGTGCCGCT...CCGCGGGACAGCTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CAA 90 bp | ATATCAAACAGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGCTCCGTCGGAGCGGAGCTaGGGGGCCTGTGGGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ISNRSRQKSPTQHDWTEAPSERS*GACGPA Trigger: CGCTGGCCCACAGGCCCCCAAGCTCCGCTCCGACGG...AGCTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTGATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CAA 90 bp | TCAAACAGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGCTGTCAGCGAGTACGCGCCGTaGGCCCAGCCGTTCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SNRSRQKSPTQHDWTEAVSEYAP*AQPFTC Trigger: GCACGTGAACGGCTGGGCCAACGGCGCGTACTCGCT...GACAGCTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CAA 90 bp | CAGCAAAACTTTCAGCCCTCCCCATCATCGGTACAAGGCAACAGTCCCAGGCAAGGCTATAAATTAACATaGGCTTTAGCTGCCGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QQNFQPSPSSVQGNSPRQGYKLT*ALAAAL Trigger: CAGCGCGGCAGCTAAAGCCAATGTTAATTTATAGCC...TTGCCTGGGACTGTTGCCTTGTACCGATGATGGGGAGGGCTGAAAGTTTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CAA 90 bp | GCGTTGCAGTTCTCCAGCTGGCCTCACCCGATACTATGTTTCTCCCATTCACTCTCTCCCATTCACTCCTaGGCTAACTGCAAACTAACA | + |
|
Preference number: 5 (lower is better) Translates to: ALQFSSWPHPILCFSHSLSPIHS*ANCKLT Trigger: TGTTAGTTTGCAGTTAGCCAAGGAGTGAATGGGAGA...GAGTGAATGGGAGAAACATAGTATCGGGTGAGGCCAGCTGGAGAACTGCAACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CAA 90 bp | ATATCAAACAGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGCTGTCCCTACGGGGTTCTaGAGTTCAGTCTCCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISNRSRQKSPTQHDWTEAVPTGF*SSVSRR Trigger: CCTTCTGGAGACTGAACTCAAGAACCCCGTAGGGAC...AGCTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CAA 90 bp | CAGCAAAACTTTCAGCCCTCCCCATCATCGGTACAAGGCAACAGTCCCAGGCAAGACTTATTTTTGCTTTaGTACAAAACCCGACAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: QQNFQPSPSSVQGNSPRQDLFLL*YKTRQL Trigger: TAGCTGTCGGGTTTTGTACAAAAGCAAAAATAAGTC...TTGCCTGGGACTGTTGCCTTGTACCGATGATGGGGAGGGCTGAAAGTTTTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS-3UTR CAA 90 bp | AAATATCAAACAGATCACGGCAGAAATCACCAACTCAACATGATTGGACAGAAGTCAGAATTGTGCATCTaGGGGTTCTCCAGGGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: KYQTDHGRNHQLNMIGQKSELCI*GFSRAI Trigger: AATGGCCCTGGAGAACCCCAAGATGCACAATTCTGA...CTTCTGTCCAATCATGTTGAGTTGGTGATTTCTGCCGTGATCTGTTTGATATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS GCA 72 bp | GTTCGCGCCGCCGGCTGCGTTCGCACTACTCTTGCCTaGGCCTCCCGGGGCTGCGGGGCCGCCGGTGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VRAAGCVRTTLA*ASRGCGAAGAR Trigger: GCGGGCACCGGCGGCCCCGCAGCCCCGGGAGGCGCAGGCAAGAGTAGTGCGAACGCAGCCGGCGGCGCGAAC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS GCA 72 bp | GGTGCATCGGCGGCAGCGCGGGCGGCGGCGGCGGGCTaGTCATGCTCGGGGGCTGCGCGTAGCCCAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GASAAARAAAAG*SCSGAARSPAA Trigger: AGCAGCTGGGCTACGCGCAGCCCCCGAGCATGAGCAGCCCGCCGCCGCCGCCCGCGCTGCCGCCGATGCACC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS GCA 72 bp | GGTCTGTACCCCCGCCACCTCCGCTCGCACCACCGCTaGTGCCGCCGCCCGAGTTCGCGCCGCCGGCTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: GLYPRHLRSHHR*CRRPSSRRRLR Trigger: ACGCAGCCGGCGGCGCGAACTCGGGCGGCGGCAGCAGCGGTGGTGCGAGCGGAGGTGGCGGGGGTACAGACC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS GCA 72 bp | TGCGTTCGCACTACTCTTGCCTGCGCCTCCCGGGGCTaGGGGGCCGCCGGTGCCCGCCGCTTGTGTGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CVRTTLACASRG*GAAGARRLCGC Trigger: ACACCCACACAAGCGGCGGGCACCGGCGGCCCCGCAGCCCCGGGAGGCGCAGGCAAGAGTAGTGCGAACGCA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS GCA 72 bp | GCGCAGGTCGCCGAGGCACGCGCGCTGAGAGTGCGATaGGATGGCGGGCGGCGGCGAGCTGGGCTCAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: AQVAEARALRVR*DGGRRRAGLRL Trigger: AAGTCTGAGCCCAGCTCGCCGCCGCCCGCCATCGCATCGCACTCTCAGCGCGCGTGCCTCGGCGACCTGCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS CCA 72 bp | CGCCAGCGTGGCGGGAGGAGAAGGCGCTCCCGGGGCTaGAGCGGCCACGGTGAAAAGGCCCTGGGACTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: RQRGGRRRRSRG*SGHGEKALGLR Trigger: ACGGAGTCCCAGGGCCTTTTCACCGTGGCCGCTCCAGCCCCGGGAGCGCCTTCTCCTCCCGCCACGCTGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS CCA 72 bp | GCGGCGAGCTGGGCTCAGACTTCACTACCGAGCCCATaGGGCCCAGGCTCATGGCGGCTGCGGCCGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AASWAQTSLPSP*GPGSWRLRPQL Trigger: CAGCTGCGGCCGCAGCCGCCATGAGCCTGGGCCCCATGGGCTCGGTAGTGAAGTCTGAGCCCAGCTCGCCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS CCA 72 bp | CCCTGGGACTCCGTCGGAGCGGAGCTTGGGGGCCTGTaGGCCAGCGAGTCCGGCGGGAAGGGTAGGCTTATC | + |
|
Preference number: 6 (lower is better) Translates to: PWDSVGAELGGL*ASESGGKGRLI Trigger: GATAAGCCTACCCTTCCCGCCGGACTCGCTGGCCCACAGGCCCCCAAGCTCCGCTCCGACGGAGTCCCAGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS CCA 72 bp | GGTCGCCGAGGCACGCGCGCTGAGAGTGCGATGCGATaGCGGGCGGCGGCGAGCTGGGCTCAGACTTCACTA | + |
|
Preference number: 6 (lower is better) Translates to: GRRGTRAESAMR*RAAASWAQTSL Trigger: TAGTGAAGTCTGAGCCCAGCTCGCCGCCGCCCGCCATCGCATCGCACTCTCAGCGCGCGTGCCTCGGCGACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS GCA 72 bp | GGGGGTGGGGAACAAGGGTGGACGAGCGCAGGCCGGTaGTCAGATGTGGGTCAGCGGCACCGTTCCGTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: GGGEQGWTSAGR*SDVGQRHRSVD Trigger: GTCAACGGAACGGTGCCGCTGACCCACATCTGAGCACCGGCCTGCGCTCGTCCACCCTTGTTCCCCACCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS TCA 72 bp | CCGGTGCTCAGATGTGGGTCAGCGGCACCGTTCCGTTaGCTGCAGTCCCGGCGCCCTGGTAGTGCTGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PVLRCGSAAPFR*LQSRRPGSAGA Trigger: TGCACCAGCACTACCAGGGCGCCGGGACTGCAGTCAACGGAACGGTGCCGCTGACCCACATCTGAGCACCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS GCA 72 bp | TGCTCAGATGTGGGTCAGCGGCACCGTTCCGTTGACTaGAGTCCCGGCGCCCTGGTAGTGCTGGTGCACGCC | + |
|
Preference number: 6 (lower is better) Translates to: CSDVGQRHRSVD*SPGALVVLVHA Trigger: GGCGTGCACCAGCACTACCAGGGCGCCGGGACTGCAGTCAACGGAACGGTGCCGCTGACCCACATCTGAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS CAA 90 bp | GGGCCGCCGGTGCCCGCCGCTTGTGTGGGTGTCCCTACGGGGTTCTaGAGTTCAGTCTCCAGAAGGCTGTACATTGCCGGGGCGGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GPPVPAACVGVPTGF*SSVSRRLYIAGAGR Trigger: TCTTCCCGCCCCGGCAATGTACAGCCTTCTGGAGACTGAACTCAAGAACCCCGTAGGGACACCCACACAAGCGGCGGGCACCGGCGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS GCA 72 bp | GGGGTTCTTGAGTTCAGTCTCCAGAAGGCTGTACATTaGCGGGGCGGGAAGAAGGTGCGCCAGCGTGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GVLEFSLQKAVH*RGGKKVRQRGG Trigger: CCCGCCACGCTGGCGCACCTTCTTCCCGCCCCGGCAATGTACAGCCTTCTGGAGACTGAACTCAAGAACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370536.5 |
||
| CDS GCA 72 bp | CCAGCGAGTCCGGCGGGAAGGGTAGGCTTATCAAAATaGTCCGCGCCAAATCAGCAGGAACCCGCGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PASPAGRVGLSK*SAPNQQEPAGF Trigger: GAAGCCCGCGGGTTCCTGCTGATTTGGCGCGGAGCATTTTGATAAGCCTACCCTTCCCGCCGGACTCGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS TCA 72 bp | TGCCCGCCGCTTGTGTGGGTGTCCCTACGGGGTTCTTaGGTTCAGTCTCCAGAAGGCTGTACATTGCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: CPPLVWVSLRGS*VQSPEGCTLPG Trigger: CCCCGGCAATGTACAGCCTTCTGGAGACTGAACTCAAGAACCCCGTAGGGACACCCACACAAGCGGCGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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| CDS CAA 72 bp | GTGCCCGCCGCTTGTGTGGGTGTCCCTACGGGGTTCTaGAGTTCAGTCTCCAGAAGGCTGTACATTGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: VPAACVGVPTGF*SSVSRRLYIAG Trigger: CCCGGCAATGTACAGCCTTCTGGAGACTGAACTCAAGAACCCCGTAGGGACACCCACACAAGCGGCGGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370536.5 |
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