Pregenerated sensors for SOX18 (Homo sapiens)
Ensembl gene IDs: ENSG00000203883Ensembl transcript IDs: ENST00000340356.9
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGGGTGGCCTGGGAGGTGGAACGGGCGCAAGGCCGAGCATCACTaGCTCCTAGGGGGCTGTGACATGGAACCAAACATACACGCGTAT | + |
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Preference number: 1 (lower is better) Translates to: EGWPGRWNGRKAEHH*LLGGCDMEPNIHAY Trigger: ATACGCGTGTATGTTTGGTTCCATGTCACAGCCCCCTAGGAGCCAGTGATGCTCGGCCTTGCGCCCGTTCCACCTCCCAGGCCACCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGCAACTCTGCCAACAGGTCCTGGGCTCGGGCTTCCTGGAAAAGCCCCGGGGGTGGCCTGGGAGGTaGAACGGGCGCAAGGCCGAG | + |
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Preference number: 2 (lower is better) Translates to: PWQLCQQVLGSGFLEKPRGWPGR*NGRKAE Trigger: CTCGGCCTTGCGCCCGTTCCACCTCCCAGGCCACCC...CCGGGGCTTTTCCAGGAAGCCCGAGCCCAGGACCTGTTGGCAGAGTTGCCAGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| 3UTR-3UTR GCA 90 bp | AACGGGCGCAAGGCCGAGCATCACTGGCTCCTAGGGGGCTGTGACATGGAACCAATCGGTCGCGGGGGCTaGGGGAGGAAGCGCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: NGRKAEHHWLLGGCDMEPIGRGG*GRKRCR Trigger: CCTGCAGCGCTTCCTCCCGCAGCCCCCGCGACCGAT...TGGTTCCATGTCACAGCCCCCTAGGAGCCAGTGATGCTCGGCCTTGCGCCCGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCCAACAGGTCCTGGGCTCGGGCTTCCTGGAAAAGCCCCGGGACACGTGGGAGCTCCTAGGGGGCTGTaGCATGGAACCAAACATACA | + |
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Preference number: 2 (lower is better) Translates to: LPTGPGLGLPGKAPGHVGAPRGL*HGTKHT Trigger: TGTATGTTTGGTTCCATGTCACAGCCCCCTAGGAGC...TCCCACGTGTCCCGGGGCTTTTCCAGGAAGCCCGAGCCCAGGACCTGTTGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCGTCCGGGGACCCAGCTCCAGGCTCCTCCTTTATAGAAAGCAAACATCTTGGGCTCGGGCTTCCTaGAAAAGCCCCGGGACACGT | + |
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Preference number: 2 (lower is better) Translates to: LSVRGPSSRLLLYRKQTSWARAS*KSPGTR Trigger: ACGTGTCCCGGGGCTTTTCCAGGAAGCCCGAGCCCA...AGATGTTTGCTTTCTATAAAGGAGGAGCCTGGAGCTGGGTCCCCGGACGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| 3UTR CCA 72 bp | GGCAACTCTGCCAACAGGTCCTGGGCTCGGGCTTCCTaGAAAAGCCCCGGGACACGTGGGAACTCCAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: GNSANRSWARAS*KSPGTRGNSRH Trigger: GTGCCTGGAGTTCCCACGTGTCCCGGGGCTTTTCCAGGAAGCCCGAGCCCAGGACCTGTTGGCAGAGTTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| 3UTR CCA 72 bp | CCTGGGAGGTGGAACGGGCGCAAGGCCGAGCATCACTaGCTCCTAGGGGGCTGTGACATGGAACCAAACATA | + |
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Preference number: 3 (lower is better) Translates to: PGRWNGRKAEHH*LLGGCDMEPNI Trigger: TATGTTTGGTTCCATGTCACAGCCCCCTAGGAGCCAGTGATGCTCGGCCTTGCGCCCGTTCCACCTCCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | CGGCAGCGACGCGGTCGGATCGGTCGCGGGGGCTGCGGGAGGAAGCGCTGCAGGAAGCCCCGGGACACGTaGGAACTCCAGGCACCCTCG | + |
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Preference number: 4 (lower is better) Translates to: RQRRGRIGRGGCGRKRCRKPRDT*ELQAPS Trigger: CGAGGGTGCCTGGAGTTCCCACGTGTCCCGGGGCTT...CCTGCAGCGCTTCCTCCCGCAGCCCCCGCGACCGATCCGACCGCGTCGCTGCCG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | CCCAGGAAGGGTGGCCTGGGAGGTGGAACGGGCGCAAGGCCGAGCATCACTGGCATCGGTCGCGGGGGCTaGGGGAGGAAGCGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PRKGGLGGGTGARPSITGIGRGG*GRKRCR Trigger: CCTGCAGCGCTTCCTCCCGCAGCCCCCGCGACCGAT...GCCAGTGATGCTCGGCCTTGCGCCCGTTCCACCTCCCAGGCCACCCTTCCTGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | CTGCCAACAGGTCCTGGGCTCGGGCTTCCTGGAAAAGCCCCGGGACACGTGGGAGATGCGCGACTCGTCTaGCGCCTGGCGTTCCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: LPTGPGLGLPGKAPGHVGDARLV*RLAFPA Trigger: CGCGGGGAACGCCAGGCGGCAGACGAGTCGCGCATC...TCCCACGTGTCCCGGGGCTTTTCCAGGAAGCCCGAGCCCAGGACCTGTTGGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | AGGGTGGCCTGGGAGGTGGAACGGGCGCAAGGCCGAGCATCACTGGCTCCTAGGTCATGGGCCGCCGGATaGGCGACTCGTCTGCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: RVAWEVERAQGRASLAPRSWAAG*ATRLPP Trigger: AGGCGGCAGACGAGTCGCGCATCCGGCGGCCCATGA...CCTAGGAGCCAGTGATGCTCGGCCTTGCGCCCGTTCCACCTCCCAGGCCACCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | CAGAAGCCCAGGAAGGGTGGCCTGGGAGGTGGAACGGGCGCAAGGCCGAGCATCGGTACGGGCCGGGCGTaGCCAGGGTGCCGTAGTACA | + |
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Preference number: 4 (lower is better) Translates to: QKPRKGGLGGGTGARPSIGTGRA*PGCRST Trigger: TGTACTACGGCACCCTGGGCACGCCCGGCCCGTACC...GATGCTCGGCCTTGCGCCCGTTCCACCTCCCAGGCCACCCTTCCTGGGCTTCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | CCCAGGAAGGGTGGCCTGGGAGGTGGAACGGGCGCAAGGCCGAGCATCACTGGCTCTCTGCATTCCAGCTaGGCGCGGCCTGGGCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: PRKGGLGGGTGARPSITGSLHSS*ARPGRN Trigger: GTTCCGCCCAGGCCGCGCCCAGCTGGAATGCAGAGA...GCCAGTGATGCTCGGCCTTGCGCCCGTTCCACCTCCCAGGCCACCCTTCCTGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | GGGCGCAAGGCCGAGCATCACTGGCTCCTAGGGGGCTGTGACATGGAACCAAACCCAGCCGCCGGGCCTTaGGCGCCTGCTTCTTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GRKAEHHWLLGGCDMEPNPAAGP*APASCG Trigger: GCCGCAAGAAGCAGGCGCGCAAGGCCCGGCGGCTGG...GTTTGGTTCCATGTCACAGCCCCCTAGGAGCCAGTGATGCTCGGCCTTGCGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | GGCTCGGGCTTCCTGGAAAAGCCCCGGGACACGTGGGAACTCCAGGCACCCTCGGCCCAGTTTGGCCAGTaGCACGTGGTACGGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GSGFLEKPRDTWELQAPSAQFGQ*HVVREP Trigger: GGGCTCCCGTACCACGTGGCACTGGCCAAACTGGGC...CGAGGGTGCCTGGAGTTCCCACGTGTCCCGGGGCTTTTCCAGGAAGCCCGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | AGCCCAGGAAGGGTGGCCTGGGAGGTGGAACGGGCGCAAGGCCGAGCATCACTGTGTAATAGACCGCGCTaGTGGCGTCCGACAGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: SPGRVAWEVERAQGRASLCNRPR*WRPTAR Trigger: CCGCGCTGTCGGACGCCAGCAGCGCGGTCTATTACA...CAGTGATGCTCGGCCTTGCGCCCGTTCCACCTCCCAGGCCACCCTTCCTGGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | AACGGGCGCAAGGCCGAGCATCACTGGCTCCTAGGGGGCTGTGACATGGAACCAGGGTGGCCTGGGAGGTaGAACGGGCGCAAGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: NGRKAEHHWLLGGCDMEPGWPGR*NGRKAE Trigger: CTCGGCCTTGCGCCCGTTCCACCTCCCAGGCCACCC...TGGTTCCATGTCACAGCCCCCTAGGAGCCAGTGATGCTCGGCCTTGCGCCCGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR TCA 90 bp | CCCAGGAAGGGTGGCCTGGGAGGTGGAACGGGCGCAAGGCCGAGCATCACTGGCAAACATACACGCGTATaGGAGAGCAGAGCGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PRKGGLGGGTGARPSITGKHTRV*ESRAAA Trigger: CGCTGCCGCTCTGCTCTCTCATACGCGTGTATGTTT...GCCAGTGATGCTCGGCCTTGCGCCCGTTCCACCTCCCAGGCCACCCTTCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | CTGCCAACAGGTCCTGGGCTCGGGCTTCCTGGAAAAGCCCCGGGACACGTGGGACGGCCTAGCCGGAGATaGACGCGCTGTAATAGACCG | + |
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Preference number: 4 (lower is better) Translates to: LPTGPGLGLPGKAPGHVGRPSRR*TRCNRP Trigger: CGGTCTATTACAGCGCGTGCATCTCCGGCTAGGCCG...TCCCACGTGTCCCGGGGCTTTTCCAGGAAGCCCGAGCCCAGGACCTGTTGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR TCA 90 bp | CGGCAGCGACGCGGTCGGATCGGTCGCGGGGGCTGCGGGAGGAAGCGCTGCAGGGACGCTTCTGATCACTaGAACTTCTTGGAAGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: RQRRGRIGRGGCGRKRCRDASDH*NFLEEK Trigger: CTTTTCTTCCAAGAAGTTTCAGTGATCAGAAGCGTC...CCTGCAGCGCTTCCTCCCGCAGCCCCCGCGACCGATCCGACCGCGTCGCTGCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | AACGGGCGCAAGGCCGAGCATCACTGGCTCCTAGGGGGCTGTGACATGGAACCAGCGCGGAGATCAGGCTaGTCTCCTCTGGGCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: NGRKAEHHWLLGGCDMEPARRSG*SPLGRT Trigger: TGTCCTGCCCAGAGGAGAGCAGCCTGATCTCCGCGC...TGGTTCCATGTCACAGCCCCCTAGGAGCCAGTGATGCTCGGCCTTGCGCCCGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | AGCCCAGGAAGGGTGGCCTGGGAGGTGGAACGGGCGCAAGGCCGAGCATCACTGCTGCAGTTGAGGTACTaGTCGAACTCGGTGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SPGRVAWEVERAQGRASLLQLRY*SNSVRS Trigger: GGACCTCACCGAGTTCGACCAGTACCTCAACTGCAG...CAGTGATGCTCGGCCTTGCGCCCGTTCCACCTCCCAGGCCACCCTTCCTGGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR TCA 90 bp | CCCTGGCAACTCTGCCAACAGGTCCTGGGCTCGGGCTTCCTGGAAAAGCCCCGGGCTCCTAGGGGGCTGTaGCATGGAACCAAACATACA | + |
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Preference number: 4 (lower is better) Translates to: PWQLCQQVLGSGFLEKPRAPRGL*HGTKHT Trigger: TGTATGTTTGGTTCCATGTCACAGCCCCCTAGGAGC...CCGGGGCTTTTCCAGGAAGCCCGAGCCCAGGACCTGTTGGCAGAGTTGCCAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | GTGACATGGAACCAAACATACACGCGTATGAGAGAGCAGAGCGGCAGCGACGCGTGGTCGCGCAAGTGCTaGACGCGCAGCCGTTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: VTWNQTYTRMREQSGSDAWSRKC*TRSRSA Trigger: AGCCGAACGGCTGCGCGTGCAGCACTTGCGCGACCA...CGCGTCGCTGCCGCTCTGCTCTCTCATACGCGTGTATGTTTGGTTCCATGTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | CTCTCCGTCCGGGGACCCAGCTCCAGGCTCCTCCTTTATAGAAAGCAAACATCTCGCGCGGGCCCAGTTTaGCCAGTGCCACGTGGTACG | + |
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Preference number: 4 (lower is better) Translates to: LSVRGPSSRLLLYRKQTSRAGPV*PVPRGT Trigger: CGTACCACGTGGCACTGGCCAAACTGGGCCCGCGCG...AGATGTTTGCTTTCTATAAAGGAGGAGCCTGGAGCTGGGTCCCCGGACGGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | TCCGGGGACCCAGCTCCAGGCTCCTCCTTTATAGAAAGCAAACATCTGTATTCCCCTCTGGGCAGGACATaGCGCGCGGGCCCAGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: SGDPAPGSSFIESKHLYSPLGRT*RAGPVW Trigger: CCAAACTGGGCCCGCGCGCCATGTCCTGCCCAGAGG...GGAATACAGATGTTTGCTTTCTATAAAGGAGGAGCCTGGAGCTGGGTCCCCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR TCA 90 bp | GTCCGGGGACCCAGCTCCAGGCTCCTCCTTTATAGAAAGCAAACATCTGTATTCACTGGTCGAACTCGGTaGGGTCCACGTCGGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: VRGPSSRLLLYRKQTSVFTGRTR*GPRRPT Trigger: TGTGGGCCGACGTGGACCTCACCGAGTTCGACCAGT...GAATACAGATGTTTGCTTTCTATAAAGGAGGAGCCTGGAGCTGGGTCCCCGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | TCCGGGGACCCAGCTCCAGGCTCCTCCTTTATAGAAAGCAAACATCTGTATTCCAATAGACCGCGCTGCTaGCGTCCGACAGCGCGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SGDPAPGSSFIESKHLYSNRPRC*RPTARR Trigger: TCTCCGCGCTGTCGGACGCCAGCAGCGCGGTCTATT...GGAATACAGATGTTTGCTTTCTATAAAGGAGGAGCCTGGAGCTGGGTCCCCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | CGGGGACCCAGCTCCAGGCTCCTCCTTTATAGAAAGCAAACATCTGTATTCCTCTGGGCTCGGGCTTCCTaGAAAAGCCCCGGGACACGT | + |
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Preference number: 4 (lower is better) Translates to: RGPSSRLLLYRKQTSVFLWARAS*KSPGTR Trigger: ACGTGTCCCGGGGCTTTTCCAGGAAGCCCGAGCCCA...GAGGAATACAGATGTTTGCTTTCTATAAAGGAGGAGCCTGGAGCTGGGTCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | GAGCATCACTGGCTCCTAGGGGGCTGTGACATGGAACCAAACATACACGCGTATCCCGAGGATTTATTGTaGCCTCTCCGTCCGGGGACC | + |
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Preference number: 4 (lower is better) Translates to: EHHWLLGGCDMEPNIHAYPEDLL*PLRPGT Trigger: GGTCCCCGGACGGAGAGGCCACAATAAATCCTCGGG...ATACGCGTGTATGTTTGGTTCCATGTCACAGCCCCCTAGGAGCCAGTGATGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR TCA 90 bp | CGGGGACCCAGCTCCAGGCTCCTCCTTTATAGAAAGCAAACATCTGTATTCCTCGAGTCCGGCTGCAGTTaGGGTACTGGTCGAACTCGG | + |
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Preference number: 4 (lower is better) Translates to: RGPSSRLLLYRKQTSVFLESGCS*GTGRTR Trigger: CCGAGTTCGACCAGTACCTCAACTGCAGCCGGACTC...GAGGAATACAGATGTTTGCTTTCTATAAAGGAGGAGCCTGGAGCTGGGTCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | GCAAACATCTGTATTCCTCACATTGCAAAAGTCTTTGCCACAGTGACGCTTCTGCCGGGCGGCGATCTCTaGATTCCAGCTGGGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: ANICIPHIAKVFATVTLLPGGDL*IPAGRG Trigger: GCCGCGCCCAGCTGGAATGCAGAGATCGCCGCCCGG...CAGAAGCGTCACTGTGGCAAAGACTTTTGCAATGTGAGGAATACAGATGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | GAAAGCAAACATCTGTATTCCTCACATTGCAAAAGTCTTTGCCACAGTGACGCTCCCGCGACAACTCGGTaGGCGCGTAGGGCGCGCGGA | + |
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Preference number: 4 (lower is better) Translates to: ESKHLYSSHCKSLCHSDAPATTR*ARRARG Trigger: TCCGCGCGCCCTACGCGCCCACCGAGTTGTCGCGGG...AGCGTCACTGTGGCAAAGACTTTTGCAATGTGAGGAATACAGATGTTTGCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | CGGGGACCCAGCTCCAGGCTCCTCCTTTATAGAAAGCAAACATCTGTATTCCTCAAGGCCGAGCATCACTaGCTCCTAGGGGGCTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: RGPSSRLLLYRKQTSVFLKAEHH*LLGGCD Trigger: GTCACAGCCCCCTAGGAGCCAGTGATGCTCGGCCTT...GAGGAATACAGATGTTTGCTTTCTATAAAGGAGGAGCCTGGAGCTGGGTCCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | GCAAACATCTGTATTCCTCACATTGCAAAAGTCTTTGCCACAGTGACGCTTCTGCGGGCGTGCCCAGGGTaGCGTAGTACAGGCCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: ANICIPHIAKVFATVTLLRACPG*RSTGQR Trigger: TCGCTGGCCTGTACTACGGCACCCTGGGCACGCCCG...CAGAAGCGTCACTGTGGCAAAGACTTTTGCAATGTGAGGAATACAGATGTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | AGCAAACATCTGTATTCCTCACATTGCAAAAGTCTTTGCCACAGTGACGCTTCTTTGGCCAGTGCCACGTaGTACGGGAGCCCGGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: SKHLYSSHCKSLCHSDASLASAT*YGSPGA Trigger: CGCCCCCGGGCTCCCGTACCACGTGGCACTGGCCAA...AGAAGCGTCACTGTGGCAAAGACTTTTGCAATGTGAGGAATACAGATGTTTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | GTCCGGGGACCCAGCTCCAGGCTCCTCCTTTATAGAAAGCAAACATCTGTATTCTCTGCCAACAGGTCCTaGGCTCGGGCTTCCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: VRGPSSRLLLYRKQTSVFSANRS*ARASWK Trigger: TTTCCAGGAAGCCCGAGCCCAGGACCTGTTGGCAGA...GAATACAGATGTTTGCTTTCTATAAAGGAGGAGCCTGGAGCTGGGTCCCCGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | AGCAAACATCTGTATTCCTCACATTGCAAAAGTCTTTGCCACAGTGACGCTTCTCAGGCTGCTCTCCTCTaGGCAGGACATGGCGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: SKHLYSSHCKSLCHSDASQAALL*AGHGAR Trigger: CCGCGCGCCATGTCCTGCCCAGAGGAGAGCAGCCTG...AGAAGCGTCACTGTGGCAAAGACTTTTGCAATGTGAGGAATACAGATGTTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CCA 90 bp | AGCAAACATCTGTATTCCTCACATTGCAAAAGTCTTTGCCACAGTGACGCTTCTCCAGGAAGGGTGGCCTaGGAGGTGGAACGGGCGCAA | + |
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Preference number: 4 (lower is better) Translates to: SKHLYSSHCKSLCHSDASPGRVA*EVERAQ Trigger: TTGCGCCCGTTCCACCTCCCAGGCCACCCTTCCTGG...AGAAGCGTCACTGTGGCAAAGACTTTTGCAATGTGAGGAATACAGATGTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | GTGACATGGAACCAAACATACACGCGTATGAGAGAGCAGAGCGGCAGCGACGCGCATTGCAAAAGTCTTTaGCACAGTGACGCTTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: VTWNQTYTRMREQSGSDAHCKSL*HSDASD Trigger: ATCAGAAGCGTCACTGTGGCAAAGACTTTTGCAATG...CGCGTCGCTGCCGCTCTGCTCTCTCATACGCGTGTATGTTTGGTTCCATGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | TCCGGGGACCCAGCTCCAGGCTCCTCCTTTATAGAAAGCAAACATCTGTATTCCCTGTATTCCTCACATTaGAAAAGTCTTTGCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: SGDPAPGSSFIESKHLYSLYSSH*KSLCHS Trigger: ACTGTGGCAAAGACTTTTGCAATGTGAGGAATACAG...GGAATACAGATGTTTGCTTTCTATAAAGGAGGAGCCTGGAGCTGGGTCCCCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR GCA 90 bp | AGCAAACATCTGTATTCCTCACATTGCAAAAGTCTTTGCCACAGTGACGCTTCTAAGAAAAGGAGCAGGTaGTTCAAAAATGTAACCCTG | + |
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Preference number: 4 (lower is better) Translates to: SKHLYSSHCKSLCHSDASKKRSR*FKNVTL Trigger: CAGGGTTACATTTTTGAAGCACCTGCTCCTTTTCTT...AGAAGCGTCACTGTGGCAAAGACTTTTGCAATGTGAGGAATACAGATGTTTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 90 bp | CAGCCTCGCCGGGCTCCAGGCCGTCCAGAGGCGAGCGCTCGGGCGTaGGCAGCCCCAGGCCGTCGAACTCGGCGCCCAGCGGGGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: QPRRAPGRPEASARA*AAPGRRTRRPAGAA Trigger: AGCTGCCCCCGCTGGGCGCCGAGTTCGACGGCCTGGGGCTGCCCACGCCCGAGCGCTCGCCTCTGGACGGCCTGGAGCCCGGCGAGGCTG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS GCA 90 bp | TCCCGGGGCCCATGCACAGTCGCGGCGGGCGGGCGGGTCGTCCTGTaGGCCGTAGCCGGGCGGCGATCTCTGCATTCCAGCTGGGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: SRGPCTVAAGGRVVL*AVAGRRSLHSSWAR Trigger: CCGCGCCCAGCTGGAATGCAGAGATCGCCGCCCGGCTACGGCGCACAGGACGACCCGCCCGCCCGCCGCGACTGTGCATGGGCCCCGGGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS GCA 90 bp | GCTCTCCTCTGGGCAGGACATGGCGCGCGGGCCCAGTTTGGCCAGTaGCACGTGGTACGGGAGCCCGGGGGCGTCGGGCCGAGTCCGGCT | + |
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Preference number: 5 (lower is better) Translates to: ALLWAGHGARAQFGQ*HVVREPGGVGPSPA Trigger: AGCCGGACTCGGCCCGACGCCCCCGGGCTCCCGTACCACGTGGCACTGGCCAAACTGGGCCCGCGCGCCATGTCCTGCCCAGAGGAGAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS GCA 90 bp | GAAGCGCTGCAGGGACCCGGGCGGCGCCGGCGGCCTAGCCGGAGATaGACGCGCTGTAATAGACCGCGCTGCTGGCGTCCGACAGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: EALQGPGRRRRPSRR*TRCNRPRCWRPTAR Trigger: CCGCGCTGTCGGACGCCAGCAGCGCGGTCTATTACAGCGCGTGCATCTCCGGCTAGGCCGCCGGCGCCGCCCGGGTCCCTGCAGCGCTTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 90 bp | TCTGGGCAGGACATGGCGCGCGGGCCCAGTTTGGCCAGTGCCACGTaGTACGGGAGCCCGGGGGCGTCGGGCCGAGTCCGGCTGCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: SGQDMARGPSLASAT*YGSPGASGRVRLQL Trigger: CAACTGCAGCCGGACTCGGCCCGACGCCCCCGGGCTCCCGTACCACGTGGCACTGGCCAAACTGGGCCCGCGCGCCATGTCCTGCCCAGA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 90 bp | TCAGGCTGCTCTCCTCTGGGCAGGACATGGCGCGCGGGCCCAGTTTaGCCAGTGCCACGTGGTACGGGAGCCCGGGGGCGTCGGGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: SGCSPLGRTWRAGPV*PVPRGTGARGRRAE Trigger: CTCGGCCCGACGCCCCCGGGCTCCCGTACCACGTGGCACTGGCCAAACTGGGCCCGCGCGCCATGTCCTGCCCAGAGGAGAGCAGCCTGA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 90 bp | GGGAGCCCGGGGGCGTCGGGCCGAGTCCGGCTGCAGTTGAGGTACTaGTCGAACTCGGTGAGGTCCACGTCGGCCCACAGATCGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: GSPGASGRVRLQLRY*SNSVRSTSAHRSAA Trigger: CGCCGCCGATCTGTGGGCCGACGTGGACCTCACCGAGTTCGACCAGTACCTCAACTGCAGCCGGACTCGGCCCGACGCCCCCGGGCTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 90 bp | CGCGCTGCTGGCGTCCGACAGCGCGGAGATCAGGCTGCTCTCCTCTaGGCAGGACATGGCGCGCGGGCCCAGTTTGGCCAGTGCCACGTG | + |
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Preference number: 5 (lower is better) Translates to: RAAGVRQRGDQAALL*AGHGARAQFGQCHV Trigger: CACGTGGCACTGGCCAAACTGGGCCCGCGCGCCATGTCCTGCCCAGAGGAGAGCAGCCTGATCTCCGCGCTGTCGGACGCCAGCAGCGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CAA 90 bp | GGCTCGGGCTTCCTGGAAAAGCCCCGGGACACGTGGGAACTCCAGGCACCCTCGTCCAGCCGCCGGGCCTaGCGCGCCTGCTTCTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: GSGFLEKPRDTWELQAPSSSRRA*RACFLR Trigger: CCGCAAGAAGCAGGCGCGCAAGGCCCGGCGGCTGGA...CGAGGGTGCCTGGAGTTCCCACGTGTCCCGGGGCTTTTCCAGGAAGCCCGAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS GCA 90 bp | CGCCGGCGGCCTAGCCGGAGATGCACGCGCTGTAATAGACCGCGCTaGTGGCGTCCGACAGCGCGGAGATCAGGCTGCTCTCCTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: RRRPSRRCTRCNRPR*WRPTARRSGCSPLG Trigger: GCCCAGAGGAGAGCAGCCTGATCTCCGCGCTGTCGGACGCCAGCAGCGCGGTCTATTACAGCGCGTGCATCTCCGGCTAGGCCGCCGGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 90 bp | CGTCCGACAGCGCGGAGATCAGGCTGCTCTCCTCTGGGCAGGACATaGCGCGCGGGCCCAGTTTGGCCAGTGCCACGTGGTACGGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: RPTARRSGCSPLGRT*RAGPVWPVPRGTGA Trigger: GGCTCCCGTACCACGTGGCACTGGCCAAACTGGGCCCGCGCGCCATGTCCTGCCCAGAGGAGAGCAGCCTGATCTCCGCGCTGTCGGACG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 90 bp | CGGCGGCCTAGCCGGAGATGCACGCGCTGTAATAGACCGCGCTGCTaGCGTCCGACAGCGCGGAGATCAGGCTGCTCTCCTCTGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: RRPSRRCTRCNRPRC*RPTARRSGCSPLGR Trigger: CCTGCCCAGAGGAGAGCAGCCTGATCTCCGCGCTGTCGGACGCCAGCAGCGCGGTCTATTACAGCGCGTGCATCTCCGGCTAGGCCGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CAA 90 bp | CCCTGGCAACTCTGCCAACAGGTCCTGGGCTCGGGCTTCCTGGAAAAGCCCCGGGCGCGCGGGCCCAGTTaGGCCAGTGCCACGTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: PWQLCQQVLGSGFLEKPRARGPS*ASATWY Trigger: GTACCACGTGGCACTGGCCAAACTGGGCCCGCGCGC...CCGGGGCTTTTCCAGGAAGCCCGAGCCCAGGACCTGTTGGCAGAGTTGCCAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS GCA 90 bp | TGTAATAGACCGCGCTGCTGGCGTCCGACAGCGCGGAGATCAGGCTaGTCTCCTCTGGGCAGGACATGGCGCGCGGGCCCAGTTTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: CNRPRCWRPTARRSG*SPLGRTWRAGPVWP Trigger: TGGCCAAACTGGGCCCGCGCGCCATGTCCTGCCCAGAGGAGAGCAGCCTGATCTCCGCGCTGTCGGACGCCAGCAGCGCGGTCTATTACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CAA 90 bp | CAGAAGCCCAGGAAGGGTGGCCTGGGAGGTGGAACGGGCGCAAGGCCGAGCATCGCTTTGCCCAGCATCTaGCTGAGCACCGCGTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: QKPRKGGLGGGTGARPSIALPSI*LSTALC Trigger: GCACAACGCGGTGCTCAGCAAGATGCTGGGCAAAGC...GATGCTCGGCCTTGCGCCCGTTCCACCTCCCAGGCCACCCTTCCTGGGCTTCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CAA 90 bp | CAGAAGCCCAGGAAGGGTGGCCTGGGAGGTGGAACGGGCGCAAGGCCGAGCATCCGAGTCCGGCTGCAGTaGAGGTACTGGTCGAACTCG | + |
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Preference number: 5 (lower is better) Translates to: QKPRKGGLGGGTGARPSIRVRLQ*RYWSNS Trigger: CGAGTTCGACCAGTACCTCAACTGCAGCCGGACTCG...GATGCTCGGCCTTGCGCCCGTTCCACCTCCCAGGCCACCCTTCCTGGGCTTCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS-3UTR CAA 90 bp | CGGGGACCCAGCTCCAGGCTCCTCCTTTATAGAAAGCAAACATCTGTATTCCTCAGGCCCGAGGATTTATaGTGGCCTCTCCGTCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: RGPSSRLLLYRKQTSVFLRPEDL*WPLRPG Trigger: CCCCGGACGGAGAGGCCACAATAAATCCTCGGGCCT...GAGGAATACAGATGTTTGCTTTCTATAAAGGAGGAGCCTGGAGCTGGGTCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 72 bp | CGGGCTCCAGGCCGTCCAGAGGCGAGCGCTCGGGCGTaGGCAGCCCCAGGCCGTCGAACTCGGCGCCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RAPGRPEASARA*AAPGRRTRRPA Trigger: CGCTGGGCGCCGAGTTCGACGGCCTGGGGCTGCCCACGCCCGAGCGCTCGCCTCTGGACGGCCTGGAGCCCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS GCA 72 bp | TGGGCAGGACATGGCGCGCGGGCCCAGTTTGGCCAGTaGCACGTGGTACGGGAGCCCGGGGGCGTCGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: WAGHGARAQFGQ*HVVREPGGVGP Trigger: CGGCCCGACGCCCCCGGGCTCCCGTACCACGTGGCACTGGCCAAACTGGGCCCGCGCGCCATGTCCTGCCCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 72 bp | TGCGCCGTAGCCGGGCGGCGATCTCTGCATTCCAGCTaGGCGCGGCCTGGGCGGAACGGAGCGCGGGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: CAVAGRRSLHSS*ARPGRNGARER Trigger: GCGCTCCCGCGCTCCGTTCCGCCCAGGCCGCGCCCAGCTGGAATGCAGAGATCGCCGCCCGGCTACGGCGCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 72 bp | GACATGGCGCGCGGGCCCAGTTTGGCCAGTGCCACGTaGTACGGGAGCCCGGGGGCGTCGGGCCGAGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: DMARGPSLASAT*YGSPGASGRVR Trigger: CCGGACTCGGCCCGACGCCCCCGGGCTCCCGTACCACGTGGCACTGGCCAAACTGGGCCCGCGCGCCATGTC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS GCA 72 bp | CAGGGACCCGGGCGGCGCCGGCGGCCTAGCCGGAGATaGACGCGCTGTAATAGACCGCGCTGCTGGCGTCCG | + |
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Preference number: 6 (lower is better) Translates to: QGPGRRRRPSRR*TRCNRPRCWRP Trigger: CGGACGCCAGCAGCGCGGTCTATTACAGCGCGTGCATCTCCGGCTAGGCCGCCGGCGCCGCCCGGGTCCCTG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS GCA 72 bp | CCATGCACAGTCGCGGCGGGCGGGCGGGTCGTCCTGTaGGCCGTAGCCGGGCGGCGATCTCTGCATTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PCTVAAGGRVVL*AVAGRRSLHSS Trigger: GCTGGAATGCAGAGATCGCCGCCCGGCTACGGCGCACAGGACGACCCGCCCGCCCGCCGCGACTGTGCATGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS GCA 72 bp | CCGCGCTGCTGGCGTCCGACAGCGCGGAGATCAGGCTaGTCTCCTCTGGGCAGGACATGGCGCGCGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PRCWRPTARRSG*SPLGRTWRAGP Trigger: TGGGCCCGCGCGCCATGTCCTGCCCAGAGGAGAGCAGCCTGATCTCCGCGCTGTCGGACGCCAGCAGCGCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CAA 72 bp | CTCTCCTCTGGGCAGGACATGGCGCGCGGGCCCAGTTaGGCCAGTGCCACGTGGTACGGGAGCCCGGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LSSGQDMARGPS*ASATWYGSPGA Trigger: CGCCCCCGGGCTCCCGTACCACGTGGCACTGGCCAAACTGGGCCCGCGCGCCATGTCCTGCCCAGAGGAGAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CAA 90 bp | ATCAGGCTGCTCTCCTCTGGGCAGGACATGGCGCGCGGGCCCAGTTaGGCCAGTGCCACGTGGTACGGGAGCCCGGGGGCGTCGGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: IRLLSSGQDMARGPS*ASATWYGSPGASGR Trigger: TCGGCCCGACGCCCCCGGGCTCCCGTACCACGTGGCACTGGCCAAACTGGGCCCGCGCGCCATGTCCTGCCCAGAGGAGAGCAGCCTGAT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 72 bp | TCTCCTCTGGGCAGGACATGGCGCGCGGGCCCAGTTTaGCCAGTGCCACGTGGTACGGGAGCCCGGGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: SPLGRTWRAGPV*PVPRGTGARGR Trigger: ACGCCCCCGGGCTCCCGTACCACGTGGCACTGGCCAAACTGGGCCCGCGCGCCATGTCCTGCCCAGAGGAGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 72 bp | GGCGTCCGACAGCGCGGAGATCAGGCTGCTCTCCTCTaGGCAGGACATGGCGCGCGGGCCCAGTTTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GVRQRGDQAALL*AGHGARAQFGQ Trigger: CTGGCCAAACTGGGCCCGCGCGCCATGTCCTGCCCAGAGGAGAGCAGCCTGATCTCCGCGCTGTCGGACGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CAA 72 bp | GGGAGCCCGGGGGCGTCGGGCCGAGTCCGGCTGCAGTaGAGGTACTGGTCGAACTCGGTGAGGTCCACGTCG | + |
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Preference number: 6 (lower is better) Translates to: GSPGASGRVRLQ*RYWSNSVRSTS Trigger: CGACGTGGACCTCACCGAGTTCGACCAGTACCTCAACTGCAGCCGGACTCGGCCCGACGCCCCCGGGCTCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CAA 90 bp | ACGTGGTACGGGAGCCCGGGGGCGTCGGGCCGAGTCCGGCTGCAGTaGAGGTACTGGTCGAACTCGGTGAGGTCCACGTCGGCCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: TWYGSPGASGRVRLQ*RYWSNSVRSTSAHR Trigger: TCTGTGGGCCGACGTGGACCTCACCGAGTTCGACCAGTACCTCAACTGCAGCCGGACTCGGCCCGACGCCCCCGGGCTCCCGTACCACGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 72 bp | GCGCGGAGATCAGGCTGCTCTCCTCTGGGCAGGACATaGCGCGCGGGCCCAGTTTGGCCAGTGCCACGTGGT | + |
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Preference number: 6 (lower is better) Translates to: ARRSGCSPLGRT*RAGPVWPVPRG Trigger: ACCACGTGGCACTGGCCAAACTGGGCCCGCGCGCCATGTCCTGCCCAGAGGAGAGCAGCCTGATCTCCGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 72 bp | GGGGCGTCGGGCCGAGTCCGGCTGCAGTTGAGGTACTaGTCGAACTCGGTGAGGTCCACGTCGGCCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: GASGRVRLQLRY*SNSVRSTSAHR Trigger: TCTGTGGGCCGACGTGGACCTCACCGAGTTCGACCAGTACCTCAACTGCAGCCGGACTCGGCCCGACGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS GCA 72 bp | CCTAGCCGGAGATGCACGCGCTGTAATAGACCGCGCTaGTGGCGTCCGACAGCGCGGAGATCAGGCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PSRRCTRCNRPR*WRPTARRSGCS Trigger: AGAGCAGCCTGATCTCCGCGCTGTCGGACGCCAGCAGCGCGGTCTATTACAGCGCGTGCATCTCCGGCTAGG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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| CDS CCA 72 bp | AGCCGGAGATGCACGCGCTGTAATAGACCGCGCTGCTaGCGTCCGACAGCGCGGAGATCAGGCTGCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SRRCTRCNRPRC*RPTARRSGCSP Trigger: AGGAGAGCAGCCTGATCTCCGCGCTGTCGGACGCCAGCAGCGCGGTCTATTACAGCGCGTGCATCTCCGGCT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340356.9 |
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