Pregenerated sensors for SOX15 (Homo sapiens)
Ensembl gene IDs: ENSG00000129194Ensembl transcript IDs: ENST00000250055.3, ENST00000538513.6, ENST00000570788.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGTACTGGGCCTGCGCCCGCCACACCTTGGCCGCGAGTGGCCTCTaGTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: RYWACARHTLAASGL*LGGLPSSGIRPHQG Trigger: GCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAGGCCACTCGCGGCCAAGGTGTGGCGGGCGCAGGCCCAGTACCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| 3UTR CCA 90 bp | ACTGGGCCTGCGCCCGCCACACCTTGGCCGCGAGTGGCCTCTGCTTaGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: TGPAPATPWPRVASA*VGSRPPASAPTKAP Trigger: TGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAGGCCACTCGCGGCCAAGGTGTGGCGGGCGCAGGCCCAGT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| 3UTR GCA 72 bp | GCCTGCGCCCGCCACACCTTGGCCGCGAGTGGCCTCTaGTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCC | + |
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Preference number: 3 (lower is better) Translates to: ACARHTLAASGL*LGGLPSSGIRP Trigger: GGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAGGCCACTCGCGGCCAAGGTGTGGCGGGCGCAGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| 3UTR CCA 72 bp | GCGCCCGCCACACCTTGGCCGCGAGTGGCCTCTGCTTaGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACC | + |
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Preference number: 3 (lower is better) Translates to: APATPWPRVASA*VGSRPPASAPT Trigger: GGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAGGCCACTCGCGGCCAAGGTGTGGCGGGCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| 3UTR CCA 72 bp | GTACTGGGCCTGCGCCCGCCACACCTTGGCCGCGAGTaGCCTCTGCTTGGGTGGGCTCCCGTCCTCCGGCAT | + |
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Preference number: 3 (lower is better) Translates to: VLGLRPPHLGRE*PLLGWAPVLRH Trigger: ATGCCGGAGGACGGGAGCCCACCCAAGCAGAGGCCACTCGCGGCCAAGGTGTGGCGGGCGCAGGCCCAGTAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR GCA 90 bp | GGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGAAGAGGGGCGCCGCGAGTGGCCTCTaGTTGGGTGGGCTCCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: GWAPVLRHPPPPRLQKRGAASGL*LGGLPS Trigger: GGACGGGAGCCCACCCAAGCAGAGGCCACTCGCGGC...GCCCCTCTTCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR TCA 90 bp | GGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGAAGAGGGGCGCCATCTGGCGGCGCTaGGCGGAGCTCCACACCATG | + |
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Preference number: 4 (lower is better) Translates to: GWAPVLRHPPPPRLQKRGAIWRR*AELHTM Trigger: CATGGTGTGGAGCTCCGCTCAGCGCCGCCAGATGGC...GCCCCTCTTCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | CCCCACCAAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCTTCGGCCCGCTTCCGGCGCCCGAGCTCTTaGCCTTGCGCCGAGGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: PHQGSRRGAHGPPSSARFRRPSS*PCAEAG Trigger: ACCGGCCTCGGCGCAAGGCCAAGAGCTCGGGCGCCG...GAAGCGGGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGTGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | TCCGCCCCCACCAAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCTTCGGCCCCTCTGCTCGGTTGGGTaGTCGCGTACCCCGGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: SAPTKAPEEGRMGLRLRPLCSVG*SRTPAP Trigger: GGGGGCCGGGGTACGCGACCACCCAACCGAGCAGAG...GGGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGTGGGGGCGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | CCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGAAGAGGGGCGCATGGGCCCGAGTGGCCTCTGCTTaGGTGGGCTCCCGTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: PVLRHPPPPRLQKRGAWARVASA*VGSRPP Trigger: CGGAGGACGGGAGCCCACCCAAGCAGAGGCCACTCG...GGCCCATGCGCCCCTCTTCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR TCA 90 bp | AGTGGCCTCTGCTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCCTGGGGTCCCGAAGATaGGGAGGCAGCAGCCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SGLCLGGLPSSGIRPHQGLGSRR*GGSSRG Trigger: GCCACGGCTGCTGCCTCCTCATCTTCGGGACCCCAG...GCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAGGCCACT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | TCCGGCATCCGCCCCCACCAAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCTAGGAGGCAGCAGCCGTaGCAGCCGGAGGCTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SGIRPHQGSRRGAHGPPSRRQQP*QPEAPG Trigger: GCCTGGAGCCTCCGGCTGCCACGGCTGCTGCCTCCT...AGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGTGGGGGCGGATGCCGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | AGTGGCCTCTGCTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCGCGCCCTCCCGCTCCTaGGGTCCCGAAGATGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SGLCLGGLPSSGIRPHQGAPSRS*GPEDEE Trigger: CTCCTCATCTTCGGGACCCCAGGAGCGGGAGGGCGC...GCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAGGCCACT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | GAGGTACTGGGCCTGCGCCCGCCACACCTTGGCCGCGAGTGGCCTCTGCTTGGGCAGAAGAGGGGCGCATaGGCCTCCGTCTTCGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: EVLGLRPPHLGREWPLLGQKRGA*ASVFGP Trigger: CGGGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTG...CCCAAGCAGAGGCCACTCGCGGCCAAGGTGTGGCGGGCGCAGGCCCAGTACCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR TCA 90 bp | AGTGGCCTCTGCTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTGTTCTGAGGCCTACTaGCTGGGGGACCCCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SGLCLGGLPSSGIRPHQGCSEAY*LGDPRS Trigger: GGACCGGGGGTCCCCCAGTCAGTAGGCCTCAGAACA...GCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAGGCCACT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR GCA 90 bp | GGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGAAGAGGGGCGCATTCCCCGACCCGCAGCTaGGATCAGACCGACCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: GLPSSGIRPHQGSRRGAHSPTRS*DQTDLP Trigger: CGGAAGGTCGGTCTGATCGCAGCTGCGGGTCGGGGA...ATGCGCCCCTCTTCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | TGGCCTCTGCTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCTGGCCTCTGCTTGGGTaGGCTCCCGTCCTCCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: WPLLGWAPVLRHPPPPRLWPLLG*APVLRH Trigger: ATGCCGGAGGACGGGAGCCCACCCAAGCAGAGGCCA...GAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAGGCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | TCTGCTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGAAGCGCCCGCCACACCTTaGCCGCGAGTGGCCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SAWVGSRPPASAPTKAPEAPATP*PRVASA Trigger: AGCAGAGGCCACTCGCGGCCAAGGTGTGGCGGGCGC...TTCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR TCA 90 bp | CTCCGGCATCCGCCCCCACCAAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCCTGGTGCCCCGGCACTaGAGAGGTGTTCTGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LRHPPPPRLQKRGAWASVLVPRH*RGVLRP Trigger: AGGCCTCAGAACACCTCTTCAGTGCCGGGGCACCAG...GACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGTGGGGGCGGATGCCGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR GCA 90 bp | CTCTGCTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGACGGAGTTCCGACAGCTaGCAGGCGCGGATAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LCLGGLPSSGIRPHQGSRRSSDS*QARIGQ Trigger: CTGGCCTATCCGCGCCTGGCAGCTGTCGGAACTCCG...TCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR GCA 90 bp | TCTGCTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGAACGCCGCTGGCCAGGTTaGCTCTTCCCTGTCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SAWVGSRPPASAPTKAPERRWPG*LFPVRS Trigger: GCTGCGGACAGGGAAGAGGCAACCTGGCCAGCGGCG...TTCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR GCA 90 bp | CGCCCCCACCAAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCTTCGGCCCGCAGAGGGCGTCCTGAATaGCCTCCCCTCAACGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RPHQGSRRGAHGPPSSARRGRPE*PPLNVK Trigger: CTTCACGTTGAGGGGAGGGCATTCAGGACGCCCTCT...GCGGGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGTGGGGGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR GCA 90 bp | GGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGAAGAGGGGCTGTACCCAAAGCCTCTaGTCGGTTGGGTGGTCGCGT | + |
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Preference number: 4 (lower is better) Translates to: GWAPVLRHPPPPRLQKRGCTQSL*SVGWSR Trigger: ACGCGACCACCCAACCGAGCAGAGGCTTTGGGTACA...GCCCCTCTTCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | ACCAAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCTTCGGCCCGCTTCCCAGCTGAGGCCTACTGACTaGGGGACCCCCGGTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: TKAPEEGRMGLRLRPASQLRPTD*GTPGPS Trigger: AGAGGGACCGGGGGTCCCCCAGTCAGTAGGCCTCAG...CTGGGAAGCGGGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | CCCACCAAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCTTCGGCCCGCTTCCTCCAGGCTCCAGGCCTaGTCCTGTGAGGAGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PTKAPEEGRMGLRLRPASSRLQA*SCEEPG Trigger: ACCAGGCTCCTCACAGGACCAGGCCTGGAGCCTGGA...GGAAGCGGGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | ACCAAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCTTCGGCCCGCTTCCCAGCACCTTGGCCGCGAGTaGCCTCTGCTTGGGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TKAPEEGRMGLRLRPASQHLGRE*PLLGWA Trigger: AGCCCACCCAAGCAGAGGCCACTCGCGGCCAAGGTG...CTGGGAAGCGGGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR GCA 90 bp | GCGAGTGGCCTCTGCTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAAAATCCGCTGTCTGGTaGCCCGGCACTGAAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: ASGLCLGGLPSSGIRPHQKSAVW*PGTEEV Trigger: CACCTCTTCAGTGCCGGGGCACCAGACAGCGGATTT...TTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAGGCCACTCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR GCA 90 bp | CCCCACCAAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCTTCGGCCCGCTTCGCACTCACCCATAGCTaGCAGGCAGGTAGGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: PHQGSRRGAHGPPSSARFALTHS*QAGRLS Trigger: CGACAGCCTACCTGCCTGGCAGCTATGGGTGAGTGC...GAAGCGGGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | GGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGAAGAGGGGCGCATGCAAAATCCGCTGTCTaGTGCCCCGGCACTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: GLPSSGIRPHQGSRRGAHAKSAV*CPGTEE Trigger: CTCTTCAGTGCCGGGGCACCAGACAGCGGATTTTGC...ATGCGCCCCTCTTCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | GTGGCCTCTGCTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTAGGCTGTCGAGTAGCTaGGGGGTCTGTACCCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: VASAWVGSRPPASAPTKARLSSS*GVCTQS Trigger: GCTTTGGGTACAGACCCCCCAGCTACTCGACAGCCT...AGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAGGCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | TGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGAAGAGGGGAGCCTGGTAGCGCCATaGGTTGGGAGAAGCCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: WVGSRPPASAPTKAPEEGSLVAP*VGRSLK Trigger: CTTAAGGCTTCTCCCAACCCATGGCGCTACCAGGCT...CCCCTCTTCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR TCA 90 bp | AAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCTTCGGCCCGCTTCCCAGGCACTTAAGAGGGCGTCCTaGATGCCCTCCCCTCAACGT | + |
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Preference number: 4 (lower is better) Translates to: KAPEEGRMGLRLRPASQALKRAS*MPSPQR Trigger: ACGTTGAGGGGAGGGCATTCAGGACGCCCTCTTAAG...TGCCTGGGAAGCGGGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR GCA 90 bp | ATCCGCCCCCACCAAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCTTCGGCCCCAGTCTGGAGTCGTTaGCGAGGAACTTGGGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: IRPHQGSRRGAHGPPSSAPVWSR*RGTWVL Trigger: AAGGACCCAAGTTCCTCGGCAACGACTCCAGACTGG...GGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGTGGGGGCGGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR TCA 90 bp | CGAGTGGCCTCTGCTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGTGAAGCGTCGATCCTaGAAATGGAAAGGTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: RVASAWVGSRPPASAPTKVKRRS*KWKGLP Trigger: GGGAAGACCTTTCCATTTTCAGGATCGACGCTTCAC...CTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAGGCCACTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR TCA 90 bp | ACCAAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCTTCGGCCCGCTTCCCAGGCCCTCCCCTCAACGTaGAGCGTCGATCCTGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: TKAPEEGRMGLRLRPASQALPST*SVDPEN Trigger: ATTTTCAGGATCGACGCTTCACGTTGAGGGGAGGGC...CTGGGAAGCGGGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | CTCTGCTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGAAAGGTCTTCCCAGTCTaGAGTCGTTGCCGAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: LCLGGLPSSGIRPHQGSRKVFPV*SRCRGT Trigger: AGTTCCTCGGCAACGACTCCAGACTGGGAAGACCTT...TCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR GCA 90 bp | GCTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGAAGAGTTAAACCGGAGCCTTTaGTTCCAACCTGTTCGGCAC | + |
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Preference number: 4 (lower is better) Translates to: AWVGSRPPASAPTKAPEELNRSL*FQPVRH Trigger: GTGCCGAACAGGTTGGAAGCAAAGGCTCCGGTTTAA...CTCTTCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | AGTGGCCTCTGCTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCCTGTTCGGCACACTTTaGGGAGAGTCGAATGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: SGLCLGGLPSSGIRPHQGLFGTL*GESNAK Trigger: TTTTGCATTCGACTCTCCCCAAAGTGTGCCGAACAG...GCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAGGCCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR GCA 90 bp | AAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCTTCGGCCCGCTTCCCAGGCATTGGGGAGAGTCGAATaGAAAATCCGCTGTCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: KAPEEGRMGLRLRPASQALGRVE*KIRCLV Trigger: CACCAGACAGCGGATTTTGCATTCGACTCTCCCCAA...TGCCTGGGAAGCGGGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CCA 90 bp | TCCTCCGGCATCCGCCCCCACCAAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGCGTTGCCGAGGAACTTaGGTCCTTAAAAAGTGTATT | + |
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Preference number: 4 (lower is better) Translates to: SSGIRPHQGSRRGAHGPPRCRGT*VLKKCI Trigger: AATACACTTTTTAAGGACCCAAGTTCCTCGGCAACG...CGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS TCA 90 bp | GGCCGCGGGGCTCCCAGCGCCCTCCCGCTCCTGGGGTCCCGAAGATaGGGAGGCAGCAGCCGTGGCAGCCGGAGGCTCCAGGCTCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: GRGAPSALPLLGSRR*GGSSRGSRRLQAPG Trigger: GCCTGGAGCCTGGAGCCTCCGGCTGCCACGGCTGCTGCCTCCTCATCTTCGGGACCCCAGGAGCGGGAGGGCGCTGGGAGCCCCGCGGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000250055.3 ENST00000538513.6 ENST00000570788.1 |
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| CDS-3UTR CAA 90 bp | CTCTGCTTGGGTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGATGCGCCCGCCACACCTaGGCCGCGAGTGGCCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LCLGGLPSSGIRPHQGSRCARHT*AASGLC Trigger: GCAGAGGCCACTCGCGGCCAAGGTGTGGCGGGCGCA...TCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCACCCAAGCAGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS CCA 90 bp | GTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGAAGAGGGGCGCATaGGCCTCCGTCTTCGGCCCGCTTCCCAGGCACTCACCCATAGCT | + |
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Preference number: 5 (lower is better) Translates to: VLRHPPPPRLQKRGA*ASVFGPLPRHSPIA Trigger: AGCTATGGGTGAGTGCCTGGGAAGCGGGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CAA 90 bp | CCAAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCTTCGGCCCGCTTCCCAGGCCCAGTCTGGAGTCGTaGCCGAGGAACTTGGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: PRLQKRGAWASVFGPLPRPSLES*PRNLGP Trigger: AGGACCCAAGTTCCTCGGCAACGACTCCAGACTGGG...CCTGGGAAGCGGGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CAA 90 bp | GTGGGCTCCCGTCCTCCGGCATCCGCCCCCACCAAGGCTCCAGAAGAGGGGCGCCTTAAACCGGAGCCTTaGCTTCCAACCTGTTCGGCA | + |
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Preference number: 5 (lower is better) Translates to: VGSRPPASAPTKAPEEGRLKPEP*LPTCSA Trigger: TGCCGAACAGGTTGGAAGCAAAGGCTCCGGTTTAAG...GCGCCCCTCTTCTGGAGCCTTGGTGGGGGCGGATGCCGGAGGACGGGAGCCCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS-3UTR CAA 90 bp | TCCGGCATCCGCCCCCACCAAGGCTCCAGAAGAGGGGCGCATGGGCCTCCGTCTCCTGTTCGGCACACTTaGGGGAGAGTCGAATGCAAA | + |
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Preference number: 5 (lower is better) Translates to: SGIRPHQGSRRGAHGPPSPVRHT*GRVECK Trigger: TTTGCATTCGACTCTCCCCAAAGTGTGCCGAACAGG...AGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGTGGGGGCGGATGCCGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS GCA 90 bp | GGGGTAAACCATAAACCCCTTTGTGGTCTCCGGAGTTCCGACAGCTaGCAGGCGCGGATAGGCCAGACCTCTCCCACCTGGGCTCAGCGT | + |
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Preference number: 5 (lower is better) Translates to: GVNHKPLCGLRSSDS*QARIGQTSPTWAQR Trigger: ACGCTGAGCCCAGGTGGGAGAGGTCTGGCCTATCCGCGCCTGGCAGCTGTCGGAACTCCGGAGACCACAAAGGGGTTTATGGTTTACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000250055.3 ENST00000570788.1 |
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| CDS TCA 90 bp | AGCCTGGTAGCGCCATGGGTTGGGAGAAGCCTTAAGAGGGCGTCCTaGATGCCCTCCCCTCAACGTGAAGCGTCGATCCTTCCGTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: SLVAPWVGRSLKRAS*MPSPQREASILPWR Trigger: CCTCCACGGAAGGATCGACGCTTCACGTTGAGGGGAGGGCATTCAGGACGCCCTCTTAAGGCTTCTCCCAACCCATGGCGCTACCAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538513.6 |
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| CDS TCA 90 bp | AGAGGGCGTCCTGAATGCCCTCCCCTCAACGTGAAGCGTCGATCCTaGAAATGGAAAGGTCTTCCCAGTCTGGAGTCGTTGCCGAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: RGRPECPPLNVKRRS*KWKGLPSLESLPRN Trigger: GTTCCTCGGCAACGACTCCAGACTGGGAAGACCTTTCCATTTTCAGGATCGACGCTTCACGTTGAGGGGAGGGCATTCAGGACGCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000250055.3 ENST00000570788.1 |
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| CDS TCA 90 bp | AGCCTGGTAGCGCCATGGGTTGGGAGAAGCCTTAAGAGGGCGTCCTaGATGCCCTCCCCTCAACGTGAAGCGTCGATCCTGAAAATGGAA | + |
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Preference number: 5 (lower is better) Translates to: SLVAPWVGRSLKRAS*MPSPQREASILKME Trigger: TTCCATTTTCAGGATCGACGCTTCACGTTGAGGGGAGGGCATTCAGGACGCCCTCTTAAGGCTTCTCCCAACCCATGGCGCTACCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000250055.3 ENST00000570788.1 |
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| CDS CCA 72 bp | CATCCGCCCCCACCAAGGCTCCAGAAGAGGGGCGCATaGGCCTCCGTCTTCGGCCCGCTTCCCAGGCACTCA | + |
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Preference number: 6 (lower is better) Translates to: HPPPPRLQKRGA*ASVFGPLPRHS Trigger: TGAGTGCCTGGGAAGCGGGCCGAAGACGGAGGCCCATGCGCCCCTCTTCTGGAGCCTTGGTGGGGGCGGATG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS GCA 72 bp | CATAAACCCCTTTGTGGTCTCCGGAGTTCCGACAGCTaGCAGGCGCGGATAGGCCAGACCTCTCCCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: HKPLCGLRSSDS*QARIGQTSPTW Trigger: CCAGGTGGGAGAGGTCTGGCCTATCCGCGCCTGGCAGCTGTCGGAACTCCGGAGACCACAAAGGGGTTTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000250055.3 ENST00000570788.1 |
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| CDS GCA 72 bp | TCTGAGGGAGGGAGCACGGTGAGGGGGCTTCCAGTTTaGAGTGGGAAGAGCCATAGCTGCCAGGCAGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: SEGGSTVRGLPV*SGKSHSCQAGR Trigger: CCTACCTGCCTGGCAGCTATGGCTCTTCCCACTGCAAACTGGAAGCCCCCTCACCGTGCTCCCTCCCTCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000250055.3 ENST00000538513.6 |
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| CDS CCA 72 bp | ACCCATAGCTGCCAGGCAGGTAGGCTGTCGAGTAGCTaGGGGGTCTGTACCCAAAGCCTCTGCTCGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: THSCQAGRLSSS*GVCTQSLCSVG Trigger: CCCAACCGAGCAGAGGCTTTGGGTACAGACCCCCCAGCTACTCGACAGCCTACCTGCCTGGCAGCTATGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570788.1 |
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| CDS TCA 72 bp | GCGCCATGGGTTGGGAGAAGCCTTAAGAGGGCGTCCTaGATGCCCTCCCCTCAACGTGAAGCGTCGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: APWVGRSLKRAS*MPSPQREASIL Trigger: CAGGATCGACGCTTCACGTTGAGGGGAGGGCATTCAGGACGCCCTCTTAAGGCTTCTCCCAACCCATGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000250055.3 ENST00000570788.1 |
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| CDS TCA 72 bp | GCGCCATGGGTTGGGAGAAGCCTTAAGAGGGCGTCCTaGATGCCCTCCCCTCAACGTGAAGCGTCGATCCTT | + |
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Preference number: 6 (lower is better) Translates to: APWVGRSLKRAS*MPSPQREASIL Trigger: AAGGATCGACGCTTCACGTTGAGGGGAGGGCATTCAGGACGCCCTCTTAAGGCTTCTCCCAACCCATGGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538513.6 |
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| CDS GCA 72 bp | CATGGGTTGGGAGAAGCCTTAAGAGGGCGTCCTGAATaGCCTCCCCTCAACGTGAAGCGTCGATCCTTCCGT | + |
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Preference number: 6 (lower is better) Translates to: HGLGEALRGRPE*PPLNVKRRSFR Trigger: ACGGAAGGATCGACGCTTCACGTTGAGGGGAGGGCATTCAGGACGCCCTCTTAAGGCTTCTCCCAACCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538513.6 |
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| CDS CCA 72 bp | ACCGGAGCCTTTGCTTCCAACCTGTTCGGCACACTTTaGGGAGAGTCGAATGCAAAATCCGCTGTCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: TGAFASNLFGTL*GESNAKSAVWC Trigger: GCACCAGACAGCGGATTTTGCATTCGACTCTCCCCAAAGTGTGCCGAACAGGTTGGAAGCAAAGGCTCCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000250055.3 ENST00000570788.1 |
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| CDS TCA 72 bp | CCTGAATGCCCTCCCCTCAACGTGAAGCGTCGATCCTaGAAATGGAAAGGTCTTCCCAGTCTGGAGTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: PECPPLNVKRRS*KWKGLPSLESL Trigger: CAACGACTCCAGACTGGGAAGACCTTTCCATTTTCAGGATCGACGCTTCACGTTGAGGGGAGGGCATTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000250055.3 ENST00000570788.1 |
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| CDS CAA 72 bp | AACCGGAGCCTTTGCTTCCAACCTGTTCGGCACACTTaGGGGAGAGTCGAATGCAAAATCCGCTGTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: NRSLCFQPVRHT*GRVECKIRCLV Trigger: CACCAGACAGCGGATTTTGCATTCGACTCTCCCCAAAGTGTGCCGAACAGGTTGGAAGCAAAGGCTCCGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000250055.3 ENST00000570788.1 |
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| CDS CCA 72 bp | AGCGTCGATCCTGAAAATGGAAAGGTCTTCCCAGTCTaGAGTCGTTGCCGAGGAACTTGGGTCCTTAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: SVDPENGKVFPV*SRCRGTWVLKK Trigger: CTTTTTAAGGACCCAAGTTCCTCGGCAACGACTCCAGACTGGGAAGACCTTTCCATTTTCAGGATCGACGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000250055.3 ENST00000570788.1 |
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