Pregenerated sensors for SOX14 (Homo sapiens)
Ensembl gene IDs: ENSG00000168875Ensembl transcript IDs: ENST00000306087.3
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAGCTGACATAACGTTTGCAAGTTTCCGGTACCTGTCTGCGCCTTaGGTCCGGGAGGACGCCCCACCCTTCCCCCTGGAAGAGAGAGGA | + |
|
Preference number: 1 (lower is better) Translates to: VADITFASFRYLSAP*VREDAPPFPLEERG Trigger: TCCTCTCTCTTCCAGGGGGAAGGGTGGGGCGTCCTCCCGGACCCAAGGCGCAGACAGGTACCGGAAACTTGCAAACGTTATGTCAGCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| 3UTR-3UTR GCA 90 bp | GGTACAGTCGGAGATTTGTTTTGGGAGAGTCGGGATAGGGGCAGCTGTGTAGCTGCTCAGAGGACAGGGTaGAGACCCGGCTTTCAGACC | + |
|
Preference number: 2 (lower is better) Translates to: GTVGDLFWESRDRGSCVAAQRTG*RPGFQT Trigger: GGTCTGAAAGCCGGGTCTGCACCCTGTCCTCTGAGC...AGCTACACAGCTGCCCCTATCCCGACTCTCCCAAAACAAATCTCCGACTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| 3UTR-3UTR GCA 90 bp | GGTACAGTCGGAGATTTGTTTTGGGAGAGTCGGGATAGGGGCAGCTGTGTAGCTTTTCCGGTACCTGTCTaGGCCTTGGGTCCGGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GTVGDLFWESRDRGSCVAFPVPV*ALGPGG Trigger: TCCTCCCGGACCCAAGGCGCAGACAGGTACCGGAAA...AGCTACACAGCTGCCCCTATCCCGACTCTCCCAAAACAAATCTCCGACTGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| 3UTR-3UTR GCA 90 bp | GAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGAAGGGGATATAAATAAAGCAGACCCCGGAGGCGTCTaGAGGCCGGGGCTAGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: EFRVQSLSEESEGDINKADPGGV*RPGLGS Trigger: TGAGCCTAGCCCCGGCCTGCAGACGCCTCCGGGGTC...TGCTTTATTTATATCCCCTTCACTCTCCTCGGATAGGCTTTGGACTCTGAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCCTTCTAGGTACATTTCCAAGACATCGTCAAAACATTTATGACCATTTAGGTGGACAGCGGCAGGGCTaGCCCCGGAGGCGTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: ILLGTFPRHRQNIYDHLGGQRQG*PRRRLQ Trigger: CTGCAGACGCCTCCGGGGTCAGCCCTGCCGCTGTCC...ACCTAAATGGTCATAAATGTTTTGACGATGTCTTGGAAATGTACCTAGAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| 3UTR-3UTR TCA 90 bp | GATATAATATCAGAATCTGGGAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGGGGCAGCTGTGTAGCTaGCATAACGTTTGCAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: DIISESGSSESKAYPRRVGQLCS*HNVCKF Trigger: AAACTTGCAAACGTTATGTCAGCTACACAGCTGCCC...CACTCTCCTCGGATAGGCTTTGGACTCTGAACTCCCAGATTCTGATATTATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTAGGTACATTTCCAAGACATCGTCAAAACATTTATGACCATTTAGGTTGTGCTCCTAGTTGTGTCTaGTGGCAAAACACAGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LLGTFPRHRQNIYDHLGCAPSCV*WQNTET Trigger: TGTCTCTGTGTTTTGCCATCAGACACAACTAGGAGC...ACAACCTAAATGGTCATAAATGTTTTGACGATGTCTTGGAAATGTACCTAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTAGGTACATTTCCAAGACATCGTCAAAACATTTATGACCATTTAGGTTGTTATAATATCAGAATCTaGGAGTTCAGAGTCCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLGTFPRHRQNIYDHLGCYNIRI*EFRVQS Trigger: GCTTTGGACTCTGAACTCCCAGATTCTGATATTATA...ACAACCTAAATGGTCATAAATGTTTTGACGATGTCTTGGAAATGTACCTAGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| 3UTR CCA 72 bp | ATAACGTTTGCAAGTTTCCGGTACCTGTCTGCGCCTTaGGTCCGGGAGGACGCCCCACCCTTCCCCCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ITFASFRYLSAP*VREDAPPFPLE Trigger: TTCCAGGGGGAAGGGTGGGGCGTCCTCCCGGACCCAAGGCGCAGACAGGTACCGGAAACTTGCAAACGTTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAGATTTGTTTTGGGAGAGTCGGGATAGGGGCAGCTGTGTAGCTGACATAACGGTACCTGTCTGCGCCTaGGGTCCGGGAGGACGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GDLFWESRDRGSCVADITVPVCA*GPGGRP Trigger: GGGGCGTCCTCCCGGACCCAAGGCGCAGACAGGTAC...CGTTATGTCAGCTACACAGCTGCCCCTATCCCGACTCTCCCAAAACAAATCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| 3UTR TCA 72 bp | CCCATACATGAAGAGCAAATGGCTCCTAGTTGTGTCTaGTGGCAAAACACAGAGACACAGCTAACTCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PIHEEQMAPSCV*WQNTETQLTLF Trigger: GAAAAGAGTTAGCTGTGTCTCTGTGTTTTGCCATCAGACACAACTAGGAGCCATTTGCTCTTCATGTATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR GCA 90 bp | ACAGGGTGCAGACCCGGCTTTCAGACCACGCCTCAGGTCCGGGCCGGGCTGGGGGGGTGCGTGTGCGTGTaGTGGCTGGGGCAGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGCRPGFQTTPQVRAGLGGCVCV*WLGQLR Trigger: CCTCAGCTGCCCCAGCCAGCACACGCACACGCACCC...CCCCAGCCCGGCCCGGACCTGAGGCGTGGTCTGAAAGCCGGGTCTGCACCCTGT 71% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | TCTGCGCCTTGGGTCCGGGAGGACGCCCCACCCTTCCCCCTGGAAGAGAGAGGATCTGGTAGCCCAGGGTaGACGCGTAGGGCAGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPWVREDAPPFPLEERGSGSPG*TRRAER Trigger: GCGCTCTGCCCTACGCGTCCACCCTGGGCTACCAGA...TCCTCTCTCTTCCAGGGGGAAGGGTGGGGCGTCCTCCCGGACCCAAGGCGCAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR GCA 90 bp | ACAGGGTGCAGACCCGGCTTTCAGACCACGCCTCAGGTCCGGGCCGGGCTGGGGTCCCTTCTCTCCTCTTaGGTTTCCAGTCGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGCRPGFQTTPQVRAGLGSLLSS*VSSRGS Trigger: GGAGCCACGACTGGAAACGCAAGAGGAGAGAAGGGA...CCCCAGCCCGGCCCGGACCTGAGGCGTGGTCTGAAAGCCGGGTCTGCACCCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | TCTGCGCCTTGGGTCCGGGAGGACGCCCCACCCTTCCCCCTGGAAGAGAGAGGATCAGGCACCAGGGGCTaGGACCCAAGTATCGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SAPWVREDAPPFPLEERGSGTRG*DPSIGV Trigger: GACTCCGATACTTGGGTCCCAGCCCCTGGTGCCTGA...TCCTCTCTCTTCCAGGGGGAAGGGTGGGGCGTCCTCCCGGACCCAAGGCGCAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | ACAGGGTGCAGACCCGGCTTTCAGACCACGCCTCAGGTCCGGGCCGGGCTGGGGTGTGGTCTGAAGGTTTaGACATGGTCCCGGCGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TGCRPGFQTTPQVRAGLGCGLKV*TWSRRL Trigger: TAGCCGCCGGGACCATGTCCAAACCTTCAGACCACA...CCCCAGCCCGGCCCGGACCTGAGGCGTGGTCTGAAAGCCGGGTCTGCACCCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR TCA 90 bp | TCTGCGCCTTGGGTCCGGGAGGACGCCCCACCCTTCCCCCTGGAAGAGAGAGGAGCCAGAGAGAAGCGCTaGCCCCACAAAGTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAPWVREDAPPFPLEERGAREKR*PHKVQL Trigger: CAGCTGAACTTTGTGGGGTCAGCGCTTCTCTCTGGC...TCCTCTCTCTTCCAGGGGGAAGGGTGGGGCGTCCTCCCGGACCCAAGGCGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR TCA 90 bp | TCTGCGCCTTGGGTCCGGGAGGACGCCCCACCCTTCCCCCTGGAAGAGAGAGGACGTTCATGGGCCGCTTaGTGTGGTCTGAAGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAPWVREDAPPFPLEERGRSWAA*CGLKVW Trigger: CCAAACCTTCAGACCACATCAAGCGGCCCATGAACG...TCCTCTCTCTTCCAGGGGGAAGGGTGGGGCGTCCTCCCGGACCCAAGGCGCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR GCA 90 bp | TCTGCGCCTTGGGTCCGGGAGGACGCCCCACCCTTCCCCCTGGAAGAGAGAGGATGCCAGTCTTGGTCATaGCTGGGAAGAGGATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAPWVREDAPPFPLEERGCQSWS*LGRGCR Trigger: CCTACATCCTCTTCCCAGGCATGACCAAGACTGGCA...TCCTCTCTCTTCCAGGGGGAAGGGTGGGGCGTCCTCCCGGACCCAAGGCGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | TCTGCGCCTTGGGTCCGGGAGGACGCCCCACCCTTCCCCCTGGAAGAGAGAGGAACTTCGCCCATCTTCTaGATGGCGCTCGAGCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SAPWVREDAPPFPLEERGTSPIF*MALELN Trigger: GTTTAGCTCGAGCGCCATCCAGAAGATGGGCGAAGT...TCCTCTCTCTTCCAGGGGGAAGGGTGGGGCGTCCTCCCGGACCCAAGGCGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | TCTGCGCCTTGGGTCCGGGAGGACGCCCCACCCTTCCCCCTGGAAGAGAGAGGAGGTCTATGCCAGTCTTaGTCATGCCTGGGAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAPWVREDAPPFPLEERGGLCQS*SCLGRG Trigger: TCCTCTTCCCAGGCATGACCAAGACTGGCATAGACC...TCCTCTCTCTTCCAGGGGGAAGGGTGGGGCGTCCTCCCGGACCCAAGGCGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | GACATAACGTTTGCAAGTTTCCGGTACCTGTCTGCGCCTTGGGTCCGGGAGGACAGGTCCGGGCCGGGCTaGGGGTTACATGGCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: DITFASFRYLSAPWVREDRSGPG*GLHGRS Trigger: GCTACGGCCATGTAACCCCCAGCCCGGCCCGGACCT...GTCCTCCCGGACCCAAGGCGCAGACAGGTACCGGAAACTTGCAAACGTTATGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| 3UTR CAA 72 bp | CATAACGTTTGCAAGTTTCCGGTACCTGTCTGCGCCTaGGGTCCGGGAGGACGCCCCACCCTTCCCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HNVCKFPVPVCA*GPGGRPTLPPG Trigger: TCCAGGGGGAAGGGTGGGGCGTCCTCCCGGACCCAAGGCGCAGACAGGTACCGGAAACTTGCAAACGTTATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR GCA 90 bp | GGTACAGTCGGAGATTTGTTTTGGGAGAGTCGGGATAGGGGCAGCTGTGTAGCTGACCCCGGAGGCGTCTaGAGGCCGGGGCTAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTVGDLFWESRDRGSCVADPGGV*RPGLGS Trigger: TGAGCCTAGCCCCGGCCTGCAGACGCCTCCGGGGTC...AGCTACACAGCTGCCCCTATCCCGACTCTCCCAAAACAAATCTCCGACTGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | GGTACAGTCGGAGATTTGTTTTGGGAGAGTCGGGATAGGGGCAGCTGTGTAGCTGAGCCTGGGCGCGGCTaGCCGTCTGTCTGTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTVGDLFWESRDRGSCVAEPGRG*PSVCPS Trigger: GGACGGACAGACAGACGGCCAGCCGCGCCCAGGCTC...AGCTACACAGCTGCCCCTATCCCGACTCTCCCAAAACAAATCTCCGACTGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR GCA 90 bp | GTAGCTGACATAACGTTTGCAAGTTTCCGGTACCTGTCTGCGCCTTGGGTCCGGGCGCTCGAGCTAAACTaGGCGGGGTCCAGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VADITFASFRYLSAPWVRALELN*AGSSRE Trigger: CTCCCTGCTGGACCCCGCGCAGTTTAGCTCGAGCGC...CCGGACCCAAGGCGCAGACAGGTACCGGAAACTTGCAAACGTTATGTCAGCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR GCA 90 bp | GGAGATTTGTTTTGGGAGAGTCGGGATAGGGGCAGCTGTGTAGCTGACATAACGGGGGACGGGTGCGTGTaGGTGTGCTGGCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDLFWESRDRGSCVADITGDGCV*VCWLGQ Trigger: CTGCCCCAGCCAGCACACGCACACGCACCCGTCCCC...CGTTATGTCAGCTACACAGCTGCCCCTATCCCGACTCTCCCAAAACAAATCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | GGAGATTTGTTTTGGGAGAGTCGGGATAGGGGCAGCTGTGTAGCTGACATAACGGGCTCCCCCTTCCCGTaGCTTTCCCGGAGCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GDLFWESRDRGSCVADITGSPFP*LSRSCR Trigger: GCGGCAGCTCCGGGAAAGCCACGGGAAGGGGGAGCC...CGTTATGTCAGCTACACAGCTGCCCCTATCCCGACTCTCCCAAAACAAATCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | GGAGATTTGTTTTGGGAGAGTCGGGATAGGGGCAGCTGTGTAGCTGACATAACGGTCCCGGCGGCTAGGTaGGTGGGGGTAGGGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GDLFWESRDRGSCVADITVPAAR*VGVGSA Trigger: TGCACTCCCTACCCCCACCCACCTAGCCGCCGGGAC...CGTTATGTCAGCTACACAGCTGCCCCTATCCCGACTCTCCCAAAACAAATCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | GGAGATTTGTTTTGGGAGAGTCGGGATAGGGGCAGCTGTGTAGCTGACATAACGTACCTGTCTGCGCCTTaGGTCCGGGAGGACGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GDLFWESRDRGSCVADITYLSAP*VREDAP Trigger: TGGGGCGTCCTCCCGGACCCAAGGCGCAGACAGGTA...CGTTATGTCAGCTACACAGCTGCCCCTATCCCGACTCTCCCAAAACAAATCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR TCA 90 bp | GAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGAAGGGGATATAAATAAAGCAGCTGGCTGGGGCAGCTaGGGCTGCCGAAGGCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: EFRVQSLSEESEGDINKAAGWGS*GCRRRR Trigger: ACGGCGCCTTCGGCAGCCTCAGCTGCCCCAGCCAGC...TGCTTTATTTATATCCCCTTCACTCTCCTCGGATAGGCTTTGGACTCTGAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR GCA 90 bp | GTAGCTGACATAACGTTTGCAAGTTTCCGGTACCTGTCTGCGCCTTGGGTCCGGGCAGGTTCTTGGGCTTaGGCCGAGGTCGGTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VADITFASFRYLSAPWVRAGSWA*AEVGTC Trigger: ACAAGTACCGACCTCGGCGCAAGCCCAAGAACCTGC...CCGGACCCAAGGCGCAGACAGGTACCGGAAACTTGCAAACGTTATGTCAGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR TCA 90 bp | TATAATATCAGAATCTGGGAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGAAGCAGGCCAGCCGCCTTaGGCGGGTCCGTGTCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YNIRIWEFRVQSLSEESEAGQPP*AGPCRP Trigger: TGGGCGACACGGACCCGCTCAAGGCGGCTGGCCTGC...TTCACTCTCCTCGGATAGGCTTTGGACTCTGAACTCCCAGATTCTGATATTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR TCA 90 bp | GGAGATTTGTTTTGGGAGAGTCGGGATAGGGGCAGCTGTGTAGCTGACATAACGGGCCGTAGCGTGGGCTaGCGAATAAGGGTCTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDLFWESRDRGSCVADITGRSVG*RIRVYA Trigger: GGCATAGACCCTTATTCGTCAGCCCACGCTACGGCC...CGTTATGTCAGCTACACAGCTGCCCCTATCCCGACTCTCCCAAAACAAATCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR TCA 90 bp | TATAATATCAGAATCTGGGAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGAAGGACAGCGGCAGGGCTaGCCCCGGAGGCGTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YNIRIWEFRVQSLSEESEGQRQG*PRRRLQ Trigger: CTGCAGACGCCTCCGGGGTCAGCCCTGCCGCTGTCC...TTCACTCTCCTCGGATAGGCTTTGGACTCTGAACTCCCAGATTCTGATATTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR GCA 90 bp | GTAGCTGACATAACGTTTGCAAGTTTCCGGTACCTGTCTGCGCCTTGGGTCCGGGTATGGCCGCTTCTCTaGCTCGGACAGAAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VADITFASFRYLSAPWVRVWPLL*LGQKLP Trigger: TGGAAGCTTCTGTCCGAGGCAGAGAAGCGGCCATAC...CCGGACCCAAGGCGCAGACAGGTACCGGAAACTTGCAAACGTTATGTCAGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | GGTACAGTCGGAGATTTGTTTTGGGAGAGTCGGGATAGGGGCAGCTGTGTAGCTGGCTTCATCGATGTATaGCCGCTTCTCTGCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTVGDLFWESRDRGSCVAGFIDV*PLLCLG Trigger: TCCGAGGCAGAGAAGCGGCCATACATCGATGAAGCC...AGCTACACAGCTGCCCCTATCCCGACTCTCCCAAAACAAATCTCCGACTGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | GAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGAAGGGGATATAAATAAAGCACGTAGCCAGGGTTGGTaGGGGACGGGTGCGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: EFRVQSLSEESEGDINKARSQGW*GTGACA Trigger: CGCACACGCACCCGTCCCCCACCAACCCTGGCTACG...TGCTTTATTTATATCCCCTTCACTCTCCTCGGATAGGCTTTGGACTCTGAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | GTAGCTGACATAACGTTTGCAAGTTTCCGGTACCTGTCTGCGCCTTGGGTCCGGGTCGGAGATTTGTTTTaGGAGAGTCGGGATAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VADITFASFRYLSAPWVRVGDLF*ESRDRG Trigger: GCCCCTATCCCGACTCTCCCAAAACAAATCTCCGAC...CCGGACCCAAGGCGCAGACAGGTACCGGAAACTTGCAAACGTTATGTCAGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR TCA 90 bp | GATATAATATCAGAATCTGGGAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGTCGCCTTGGCGCCGCTaGGGGGAAGCCAGAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DIISESGSSESKAYPRRVSPWRR*GEAREK Trigger: CTTCTCTCTGGCTTCCCCTCAGCGGCGCCAAGGCGA...CACTCTCCTCGGATAGGCTTTGGACTCTGAACTCCCAGATTCTGATATTATATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR TCA 90 bp | GATATAATATCAGAATCTGGGAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGTCTGTCTGTCCGTCCTaGGCCGGGGTTCTGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DIISESGSSESKAYPRRVSVCPS*AGVLRS Trigger: GGAGCGCAGAACCCCGGCTCAGGACGGACAGACAGA...CACTCTCCTCGGATAGGCTTTGGACTCTGAACTCCCAGATTCTGATATTATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | GATATAATATCAGAATCTGGGAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGCCACGTAGCCAGGGTTaGTGGGGGACGGGTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DIISESGSSESKAYPRRVPRSQG*WGTGAC Trigger: ACACGCACCCGTCCCCCACCAACCCTGGCTACGTGG...CACTCTCCTCGGATAGGCTTTGGACTCTGAACTCCCAGATTCTGATATTATATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR GCA 90 bp | TATAATATCAGAATCTGGGAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGAAGGAGTGCAAGGGTTCTaGAGACGAGCCTGGGCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YNIRIWEFRVQSLSEESEGVQGF*RRAWAR Trigger: CCGCGCCCAGGCTCGTCTGCAGAACCCTTGCACTCC...TTCACTCTCCTCGGATAGGCTTTGGACTCTGAACTCCCAGATTCTGATATTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | TATAATATCAGAATCTGGGAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGAATTCTGCAGACGAGCCTaGGCGCGGCTGGCCGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YNIRIWEFRVQSLSEESEFCRRA*ARLAVC Trigger: ACAGACGGCCAGCCGCGCCCAGGCTCGTCTGCAGAA...TTCACTCTCCTCGGATAGGCTTTGGACTCTGAACTCCCAGATTCTGATATTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR TCA 90 bp | GGAGATTTGTTTTGGGAGAGTCGGGATAGGGGCAGCTGTGTAGCTGACATAACGGCTCCTAGTTGTGTCTaGTGGCAAAACACAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GDLFWESRDRGSCVADITAPSCV*WQNTET Trigger: TGTCTCTGTGTTTTGCCATCAGACACAACTAGGAGC...CGTTATGTCAGCTACACAGCTGCCCCTATCCCGACTCTCCCAAAACAAATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR GCA 90 bp | ATCCTTCTAGGTACATTTCCAAGACATCGTCAAAACATTTATGACCATTTAGGTCCTGAGCCGGGGTTCTaGGCTCCCCTCGCCTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ILLGTFPRHRQNIYDHLGPEPGF*APLALA Trigger: CGCCAAGGCGAGGGGAGCGCAGAACCCCGGCTCAGG...ACCTAAATGGTCATAAATGTTTTGACGATGTCTTGGAAATGTACCTAGAAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR GCA 90 bp | GGAGATTTGTTTTGGGAGAGTCGGGATAGGGGCAGCTGTGTAGCTGACATAACGACGAATAAGGGTCTATaGCAGTCTTGGTCATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDLFWESRDRGSCVADITTNKGL*QSWSCL Trigger: CAGGCATGACCAAGACTGGCATAGACCCTTATTCGT...CGTTATGTCAGCTACACAGCTGCCCCTATCCCGACTCTCCCAAAACAAATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR TCA 90 bp | GAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGAAGGGGATATAAATAAAGCACCGCTTGATGTGGTCTaGAGGTTTGGACATGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EFRVQSLSEESEGDINKAPLDVV*RFGHGP Trigger: GGGACCATGTCCAAACCTTCAGACCACATCAAGCGG...TGCTTTATTTATATCCCCTTCACTCTCCTCGGATAGGCTTTGGACTCTGAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | GTAGCTGACATAACGTTTGCAAGTTTCCGGTACCTGTCTGCGCCTTGGGTCCGGTACATGAAGAGCAAATaGCTCCTAGTTGTGTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VADITFASFRYLSAPWVRYMKSK*LLVVSD Trigger: ATCAGACACAACTAGGAGCCATTTGCTCTTCATGTA...CCGGACCCAAGGCGCAGACAGGTACCGGAAACTTGCAAACGTTATGTCAGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | GAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGAAGGGGATATAAATAAAGCAAGTCTTGGTCATGCCTaGGAAGAGGATGTAGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: EFRVQSLSEESEGDINKASLGHA*EEDVGD Trigger: GTCGCCTACATCCTCTTCCCAGGCATGACCAAGACT...TGCTTTATTTATATCCCCTTCACTCTCCTCGGATAGGCTTTGGACTCTGAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR GCA 90 bp | ATCCTTCTAGGTACATTTCCAAGACATCGTCAAAACATTTATGACCATTTAGGTGCTCAGAGGACAGGGTaGAGACCCGGCTTTCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: ILLGTFPRHRQNIYDHLGAQRTG*RPGFQT Trigger: GGTCTGAAAGCCGGGTCTGCACCCTGTCCTCTGAGC...ACCTAAATGGTCATAAATGTTTTGACGATGTCTTGGAAATGTACCTAGAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR GCA 90 bp | ATCCTTCTAGGTACATTTCCAAGACATCGTCAAAACATTTATGACCATTTAGGTTTTCCGGTACCTGTCTaGGCCTTGGGTCCGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILLGTFPRHRQNIYDHLGFPVPV*ALGPGG Trigger: TCCTCCCGGACCCAAGGCGCAGACAGGTACCGGAAA...ACCTAAATGGTCATAAATGTTTTGACGATGTCTTGGAAATGTACCTAGAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | ATCCTTCTAGGTACATTTCCAAGACATCGTCAAAACATTTATGACCATTTAGGTCTGAAGGTTTGGACATaGTCCCGGCGGCTAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILLGTFPRHRQNIYDHLGLKVWT*SRRLGG Trigger: CCCACCTAGCCGCCGGGACCATGTCCAAACCTTCAG...ACCTAAATGGTCATAAATGTTTTGACGATGTCTTGGAAATGTACCTAGAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | ATCCTTCTAGGTACATTTCCAAGACATCGTCAAAACATTTATGACCATTTAGGTCCGGTAGCCAAGGTGTaGGGCACTTCGCCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILLGTFPRHRQNIYDHLGPVAKV*GTSPIF Trigger: GAAGATGGGCGAAGTGCCCCACACCTTGGCTACCGG...ACCTAAATGGTCATAAATGTTTTGACGATGTCTTGGAAATGTACCTAGAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR TCA 90 bp | TATAATATCAGAATCTGGGAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGAAGGGCAGCTGTGTAGCTaGCATAACGTTTGCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YNIRIWEFRVQSLSEESEGQLCS*HNVCKF Trigger: AAACTTGCAAACGTTATGTCAGCTACACAGCTGCCC...TTCACTCTCCTCGGATAGGCTTTGGACTCTGAACTCCCAGATTCTGATATTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CCA 90 bp | ATCCTTCTAGGTACATTTCCAAGACATCGTCAAAACATTTATGACCATTTAGGTATGGGCCGCTTGATGTaGTCTGAAGGTTTGGACATG | + |
|
Preference number: 4 (lower is better) Translates to: ILLGTFPRHRQNIYDHLGMGRLM*SEGLDM Trigger: CATGTCCAAACCTTCAGACCACATCAAGCGGCCCAT...ACCTAAATGGTCATAAATGTTTTGACGATGTCTTGGAAATGTACCTAGAAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR TCA 90 bp | ATCCTTCTAGGTACATTTCCAAGACATCGTCAAAACATTTATGACCATTTAGGTTCACCTTCTACTTCCTaGCTTCATAACCCGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: ILLGTFPRHRQNIYDHLGSPSTS*LHNPTF Trigger: GAATGTCGGGTTATGAAGTCAGGAAGTAGAAGGTGA...ACCTAAATGGTCATAAATGTTTTGACGATGTCTTGGAAATGTACCTAGAAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS TCA 90 bp | TCTGCAGACGAGCCTGGGCGCGGCTGGCCGTCTGTCTGTCCGTCCTaGGCCGGGGTTCTGCGCTCCCCTCGCCTTGGCGCCGCTGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SADEPGRGWPSVCPS*AGVLRSPRLGAAEG Trigger: CCCCTCAGCGGCGCCAAGGCGAGGGGAGCGCAGAACCCCGGCTCAGGACGGACAGACAGACGGCCAGCCGCGCCCAGGCTCGTCTGCAGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS TCA 90 bp | GGTTGGTGGGGGACGGGTGCGTGTGCGTGTGCTGGCTGGGGCAGCTaGGGCTGCCGAAGGCGCCGTTCTGGTAGCCCAGGGTGGACGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GWWGTGACACAGWGS*GCRRRRSGSPGWTR Trigger: ACGCGTCCACCCTGGGCTACCAGAACGGCGCCTTCGGCAGCCTCAGCTGCCCCAGCCAGCACACGCACACGCACCCGTCCCCCACCAACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CAA 90 bp | TCTGCGCCTTGGGTCCGGGAGGACGCCCCACCCTTCCCCCTGGAAGAGAGAGGAGTACCTGTCTGCGCCTaGGGTCCGGGAGGACGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SAPWVREDAPPFPLEERGVPVCA*GPGGRP Trigger: GGGGCGTCCTCCCGGACCCAAGGCGCAGACAGGTAC...TCCTCTCTCTTCCAGGGGGAAGGGTGGGGCGTCCTCCCGGACCCAAGGCGCAGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS CCA 90 bp | CGCTTGATGTGGTCTGAAGGTTTGGACATGGTCCCGGCGGCTAGGTaGGTGGGGGTAGGGAGTGCAAGGGTTCTGCAGACGAGCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLMWSEGLDMVPAAR*VGVGSARVLQTSLG Trigger: GCCCAGGCTCGTCTGCAGAACCCTTGCACTCCCTACCCCCACCCACCTAGCCGCCGGGACCATGTCCAAACCTTCAGACCACATCAAGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CAA 90 bp | ACAGGGTGCAGACCCGGCTTTCAGACCACGCCTCAGGTCCGGGCCGGGCTGGGGGGTACAGTCGGAGATTaGTTTTGGGAGAGTCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TGCRPGFQTTPQVRAGLGGTVGD*FWESRD Trigger: ATCCCGACTCTCCCAAAACAAATCTCCGACTGTACC...CCCCAGCCCGGCCCGGACCTGAGGCGTGGTCTGAAAGCCGGGTCTGCACCCTGT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS TCA 90 bp | CTCAGGTCCGGGCCGGGCTGGGGGTTACATGGCCGTAGCGTGGGCTaGCGAATAAGGGTCTATGCCAGTCTTGGTCATGCCTGGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRSGPGWGLHGRSVG*RIRVYASLGHAWEE Trigger: CTCTTCCCAGGCATGACCAAGACTGGCATAGACCCTTATTCGTCAGCCCACGCTACGGCCATGTAACCCCCAGCCCGGCCCGGACCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CAA 90 bp | GATATAATATCAGAATCTGGGAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGGGCAGGCCAGCCGCCTaGAGCGGGTCCGTGTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DIISESGSSESKAYPRRVGRPAA*SGSVSP Trigger: GGGCGACACGGACCCGCTCAAGGCGGCTGGCCTGCC...CACTCTCCTCGGATAGGCTTTGGACTCTGAACTCCCAGATTCTGATATTATATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CAA 90 bp | GACATAACGTTTGCAAGTTTCCGGTACCTGTCTGCGCCTTGGGTCCGGGAGGACGCGTTCATGGGCCGCTaGATGTGGTCTGAAGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DITFASFRYLSAPWVREDAFMGR*MWSEGL Trigger: CAAACCTTCAGACCACATCAAGCGGCCCATGAACGC...GTCCTCCCGGACCCAAGGCGCAGACAGGTACCGGAAACTTGCAAACGTTATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CAA 90 bp | GGAGATTTGTTTTGGGAGAGTCGGGATAGGGGCAGCTGTGTAGCTGACATAACGGGGTCTATGCCAGTCTaGGTCATGCCTGGGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GDLFWESRDRGSCVADITGSMPV*VMPGKR Trigger: CCTCTTCCCAGGCATGACCAAGACTGGCATAGACCC...CGTTATGTCAGCTACACAGCTGCCCCTATCCCGACTCTCCCAAAACAAATCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CAA 90 bp | CTTCTAGGTACATTTCCAAGACATCGTCAAAACATTTATGACCATTTAGGTTGTTGCGCTCCCCTCGCCTaGGCGCCGCTGAGGGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLGTFPRHRQNIYDHLGCCAPLA*APLRGS Trigger: GCTTCCCCTCAGCGGCGCCAAGGCGAGGGGAGCGCA...ACAACCTAAATGGTCATAAATGTTTTGACGATGTCTTGGAAATGTACCTAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CAA 90 bp | GATATAATATCAGAATCTGGGAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGATGTGGTCTGAAGGTTaGGACATGGTCCCGGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: DIISESGSSESKAYPRRVMWSEG*DMVPAA Trigger: AGCCGCCGGGACCATGTCCAAACCTTCAGACCACAT...CACTCTCCTCGGATAGGCTTTGGACTCTGAACTCCCAGATTCTGATATTATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CAA 90 bp | TATAATATCAGAATCTGGGAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGAATGGGCGCGTAGCCGCTaGGCTTCATCGATGTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: YNIRIWEFRVQSLSEESEWARSR*ASSMYG Trigger: GCCATACATCGATGAAGCCAAGCGGCTACGCGCCCA...TTCACTCTCCTCGGATAGGCTTTGGACTCTGAACTCCCAGATTCTGATATTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CAA 90 bp | GATATAATATCAGAATCTGGGAGTTCAGAGTCCAAAGCCTATCCGAGGAGAGTGTTCCCTTCTCTCCTCTaGCGTTTCCAGTCGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DIISESGSSESKAYPRRVFPSLL*RFQSWL Trigger: GAGCCACGACTGGAAACGCAAGAGGAGAGAAGGGAA...CACTCTCCTCGGATAGGCTTTGGACTCTGAACTCCCAGATTCTGATATTATATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS-3UTR CAA 90 bp | ATCCTTCTAGGTACATTTCCAAGACATCGTCAAAACATTTATGACCATTTAGGTAAACTGCCTACTTTTTaGTCCAAAGGGGGTACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ILLGTFPRHRQNIYDHLGKLPTF*SKGGTV Trigger: GACTGTACCCCCTTTGGACAAAAAAGTAGGCAGTTT...ACCTAAATGGTCATAAATGTTTTGACGATGTCTTGGAAATGTACCTAGAAGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS CCA 72 bp | CGGTACAGTTACAGGGCACCACGTAGCCAGGGTTGGTaGGGGACGGGTGCGTGTGCGTGTGCTGGCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RYSYRAPRSQGW*GTGACACAGWG Trigger: GCCCCAGCCAGCACACGCACACGCACCCGTCCCCCACCAACCCTGGCTACGTGGTGCCCTGTAACTGTACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS CCA 72 bp | AGGCGGTACAGTTACAGGGCACCACGTAGCCAGGGTTaGTGGGGGACGGGTGCGTGTGCGTGTGCTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRYSYRAPRSQG*WGTGACACAGW Trigger: CCAGCCAGCACACGCACACGCACCCGTCCCCCACCAACCCTGGCTACGTGGTGCCCTGTAACTGTACCGCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS CCA 72 bp | CCGGTAGCCAAGGTGTGGGGCACTTCGCCCATCTTCTaGATGGCGCTCGAGCTAAACTGCGCGGGGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PVAKVWGTSPIF*MALELNCAGSS Trigger: GCTGGACCCCGCGCAGTTTAGCTCGAGCGCCATCCAGAAGATGGGCGAAGTGCCCCACACCTTGGCTACCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS TCA 72 bp | AAGCCAGAGAGAAGCGCTGACCCCACAAAGTTCAGCTaGTCATGCCAGTCCCAGCGCCCAGGCAGCCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: KPERSADPTKFS*SCQSQRPGSPG Trigger: CCCGGGGCTGCCTGGGCGCTGGGACTGGCATGATCAGCTGAACTTTGTGGGGTCAGCGCTTCTCTCTGGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS TCA 72 bp | GGGCCGGGCTGGGGGTTACATGGCCGTAGCGTGGGCTaGCGAATAAGGGTCTATGCCAGTCTTGGTCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: GPGWGLHGRSVG*RIRVYASLGHA Trigger: GGCATGACCAAGACTGGCATAGACCCTTATTCGTCAGCCCACGCTACGGCCATGTAACCCCCAGCCCGGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS CAA 72 bp | AGGGCAAGAAGCTCCTCCTTCTCCCCCTCTCCACCTTaGCCTTCTCTAGTTCCCTTCTCTCCTCTTGCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RARSSSFSPSPP*PSLVPFSPLAF Trigger: AAACGCAAGAGGAGAGAAGGGAACTAGAGAAGGCAAAGGTGGAGAGGGGGAGAAGGAGGAGCTTCTTGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||
| CDS CAA 90 bp | TTTTTAGCCAGGGCAAGAAGCTCCTCCTTCTCCCCCTCTCCACCTTaGCCTTCTCTAGTTCCCTTCTCTCCTCTTGCGTTTCCAGTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: FLARARSSSFSPSPP*PSLVPFSPLAFPVV Trigger: CACGACTGGAAACGCAAGAGGAGAGAAGGGAACTAGAGAAGGCAAAGGTGGAGAGGGGGAGAAGGAGGAGCTTCTTGCCCTGGCTAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000306087.3 |
||