RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SOX13 (Homo sapiens)

Ensembl gene IDs: ENSG00000143842

Ensembl transcript IDs: ENST00000272193.10, ENST00000367203.8, ENST00000367204.6, ENST00000480326.1, ENST00000525258.1, ENST00000525442.1, ENST00000528591.5, ENST00000530882.1, ENST00000534185.1, ENST00000618875.4

Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGAGGTGCTCAGCCTGCTCAGCCCATGGCCATACTGCAGTTCCTaGCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGCCTCTC +
Preference number: 1 (lower is better)
Translates to: AEVLSLLSPWPYCSS*PPRPTAPQEGRAPL
Trigger: GAGAGGCGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGGCCATGGGCTGAGCAGGCTGAGCACCTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR TCA 90 bp CCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATaGATGTATCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACG +
Preference number: 1 (lower is better)
Translates to: PRPTAPQEGRAPLPS*MYLQVHSFAHLWGT
Trigger: CGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR CCA 90 bp AAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTaGGAGGGGTGTTGGTCCCACAGTGGCTGGTCCAGCCAGGACAAG +
Preference number: 1 (lower is better)
Translates to: KYKAILVIDEQSGGV*EGCWSHSGWSSQDK
Trigger: CTTGTCCTGGCTGGACCAGCCACTGTGGGACCAACACCCCTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR TCA 90 bp GAGAGGAGAGTCATACAGTGTCCCCTGGCCATAAGCCCTAAAGGCTaGGGTGCTCAGCCTGCTCAGCCCATGGCCATACTGCAGTTCCTG +
Preference number: 1 (lower is better)
Translates to: ERRVIQCPLAISPKG*GAQPAQPMAILQFL
Trigger: CAGGAACTGCAGTATGGCCATGGGCTGAGCAGGCTGAGCACCTCAGCCTTTAGGGCTTATGGCCAGGGGACACTGTATGACTCTCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR TCA 90 bp CCACAGTGGCTGGTCCAGCCAGGACAAGAATGGAAACAAAGCATGTaGCCCCAGGGAGACAGGTCGGTAGATGCCATACCCCAGGTGGAT +
Preference number: 1 (lower is better)
Translates to: PQWLVQPGQEWKQSM*PQGDRSVDAIPQVD
Trigger: ATCCACCTGGGGTATGGCATCTACCGACCTGTCTCCCTGGGGTCACATGCTTTGTTTCCATTCTTGTCCTGGCTGGACCAGCCACTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR CCA 90 bp ATCTCTGGGGCACGAACAAGTCCAAGTACCAACATAGTCTTAGGTTaGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGG +
Preference number: 1 (lower is better)
Translates to: ISGARTSPSTNIVLG*LAVPIELGQGLPQR
Trigger: CCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTTGGTACTTGGACTTGTTCGTGCCCCAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR GCA 90 bp AGGGGGCAAAGGACAGACACCAAGAAAGAGAGAAATAGAGGGCCTTaGAGAGAGACGAGGACAGAGAGAGACAGAAATGCACACAAGGAC +
Preference number: 1 (lower is better)
Translates to: RGQRTDTKKERNRGP*RETRTERDRNAHKD
Trigger: GTCCTTGTGTGCATTTCTGTCTCTCTCTGTCCTCGTCTCTCTGCAAGGCCCTCTATTTCTCTCTTTCTTGGTGTCTGTCCTTTGCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CCA 90 bp TGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTCACTGCAGGTCCCGCGTaGGGCCTCCATGGCTGGGGG +
Preference number: 2 (lower is better)
Translates to: WMALVTASPSPRKPRGRLTAGPA*GLHGWG
Trigger: CCCCCAGCCATGGAGGCCCCACGCGGGACCTGCAGT...GAGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
3UTR-3UTR CCA 90 bp GCATCCTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCGGGAGCTGGAGGTGTTaGGCAGCTCGGGGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: ASWMALVTASPSPRKPRGGSWRC*AARGPW
Trigger: CCAAGGCCCCCGAGCTGCCCAACACCTCCAGCTCCC...GCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAGGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480326.1
3UTR-3UTR TCA 90 bp CTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTCCTTGGGCTTGGCTGTaGGGTTCAGGGGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: LDGFGDSVPFTKEAQRQAPWAWL*GSGAGR
Trigger: CCTCCCAGCCCCTGAACCTCACAGCCAAGCCCAAGG...AGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480326.1
3UTR-3UTR CCA 90 bp CTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTGGTGGTGGGTGGCCATaGCCCCAGGCCTCTTCACCA +
Preference number: 2 (lower is better)
Translates to: LDGFGDSVPFTKEAQRQAGGGWP*PQASSP
Trigger: TGGTGAAGAGGCCTGGGGCCATGGCCACCCACCACC...AGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480326.1
3UTR-3UTR TCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGGCGCCTCTCCCCTCATaGATGTATCTGCAAGTGCAC +
Preference number: 2 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKAPLPS*MYLQVH
Trigger: GTGCACTTGCAGATACATTCATGAGGGGAGAGGCGC...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR GCA 90 bp TGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTCGGCGGGGCACACAGCTaGTCATCTTCAGGCTTGGGG +
Preference number: 2 (lower is better)
Translates to: WMALVTASPSPRKPRGRLGGAHS*SSSGLG
Trigger: CCCCAAGCCTGAAGATGAGCAGCTGTGTGCCCCGCC...GAGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480326.1
3UTR-3UTR CCA 90 bp GCATCCTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCTCAGGCTTGGGGAGCTaGAGGTGTTGGGCAGCTCGG +
Preference number: 2 (lower is better)
Translates to: ASWMALVTASPSPRKPRGSGLGS*RCWAAR
Trigger: CCGAGCTGCCCAACACCTCCAGCTCCCCAAGCCTGA...GCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480326.1
3UTR-3UTR CCA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGCTGTGCCCATCGAGTTaGGACAAGGTCTTCCCCAGA +
Preference number: 2 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRALCPSS*DKVFPR
Trigger: TCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAG...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR TCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGAGGACACACAGAACCTaGGACACCCAGACTGACAAA +
Preference number: 2 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKRTHRT*DTQTDK
Trigger: TTTGTCAGTCTGGGTGTCTCAGGTTCTGTGTGTCCT...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGAACATAGTCTTAGGTTaGCTGGCTGTGCCCATCGAG +
Preference number: 2 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKNIVLG*LAVPIE
Trigger: CTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CCA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGAGCTTTGCCCATCTCTaGGGCACGAACAAGTCCAAG +
Preference number: 2 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRASFAHL*GTNKSK
Trigger: CTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCT...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR CAA 90 bp CCAAGTACCAACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTaGGGACAAGGTCTTCCCCAGAGGAGAAGGGGCCAGGCCCACCCA +
Preference number: 2 (lower is better)
Translates to: PSTNIVLGWLAVPIE*GQGLPQRRRGQAHP
Trigger: TGGGTGGGCCTGGCCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTTGGTACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTGTGTGGGAGGGGTGTTaGTCCCACAGTGGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: RSRSGIERHTHRNSATVPVWEGC*SHSGWS
Trigger: GGACCAGCCACTGTGGGACCAACACCCCTCCCACAC...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTCAGTCTGGGGGAGTGTaGGAGGGGTGTTGGTCCCAC +
Preference number: 2 (lower is better)
Translates to: RSRSGIERHTHRNSATVPQSGGV*EGCWSH
Trigger: GTGGGACCAACACCCCTCCCACACTCCCCCAGACTG...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR GCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTCTGAGGTGCTCAGCCTaGTCAGCCCATGGCCATACT +
Preference number: 2 (lower is better)
Translates to: RSRSGIERHTHRNSATVPLRCSA*SAHGHT
Trigger: AGTATGGCCATGGGCTGAGCAGGCTGAGCACCTCAG...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTAGCCTGCTCAGCCCATaGCCATACTGCAGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: RSRSGIERHTHRNSATVPSLLSP*PYCSSC
Trigger: GCAGGAACTGCAGTATGGCCATGGGCTGAGCAGGCT...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR CAA 90 bp CACACGTGCACGCGCACACATACAGCAGCCAGAGGCACAATAGGCTaGGCAGAGATGAAAACAGCAAGGGACAGCCAGACCCTTTTGCAC +
Preference number: 2 (lower is better)
Translates to: HTCTRTHTAARGTIG*AEMKTARDSQTLLH
Trigger: GTGCAAAAGGGTCTGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGTGCGCGTGCACGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR GCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTGCAAGTGCACAGCTTTaGCCATCTCTGGGGCACGAA +
Preference number: 2 (lower is better)
Translates to: RSRSGIERHTHRNSATVPASAQL*PSLGHE
Trigger: TTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGC...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR GCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCACCATACTGCAGTTCCTaGCCACCCAGGCCAACAGCT +
Preference number: 2 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPPYCSS*PPRPTA
Trigger: AGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGCTGTGCCCATCGAGTTaGGACAAGGTCTTCCCCAGA +
Preference number: 2 (lower is better)
Translates to: RKGGRLSPHECICKCTALLCPSS*DKVFPR
Trigger: TCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAG...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCAACATAGTCTTAGGTTaGCTGGCTGTGCCCATCGAG +
Preference number: 2 (lower is better)
Translates to: QLLRKGGRLSPHECICKCNIVLG*LAVPIE
Trigger: CTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTTGGTCCCACAGTGGCTaGTCCAGCCAGGACAAGAAT +
Preference number: 2 (lower is better)
Translates to: RSRSGIERHTHRNSATVPWSHSG*SSQDKN
Trigger: ATTCTTGTCCTGGCTGGACCAGCCACTGTGGGACCA...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR CAA 90 bp CATCTCTGGGGCACGAACAAGTCCAAGTACCAACATAGTCTTAGGTaGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: HLWGTNKSKYQHSLR*AGCAHRVGTRSSPE
Trigger: CTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTTGGTACTTGGACTTGTTCGTGCCCCAGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR CAA 90 bp GGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTaGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCAACATAGTC +
Preference number: 2 (lower is better)
Translates to: GGRLSPHECICKCTA*PISGARTSPSTNIV
Trigger: GACTATGTTGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR TCA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGATAAGCCCTAAAGGCTaGGGTGCTCAGCCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: TKYKAILVIDEQSGGVWEISPKG*GAQPAQ
Trigger: CTGAGCAGGCTGAGCACCTCAGCCTTTAGGGCTTAT...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR GCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGCCATACTGCAGTTCCTaGCCACCCAGGCCAACAGCT +
Preference number: 2 (lower is better)
Translates to: THTAARGTIGLAEMKTARPYCSS*PPRPTA
Trigger: AGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR TCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGATAAGCCCTAAAGGCTaGGGTGCTCAGCCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: THTAARGTIGLAEMKTARISPKG*GAQPAQ
Trigger: CTGAGCAGGCTGAGCACCTCAGCCTTTAGGGCTTAT...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR GCA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGCCTCATGAATGTATCTaGAAGTGCACAGCTTTGCCC +
Preference number: 2 (lower is better)
Translates to: TKYKAILVIDEQSGGVWEPHECI*KCTALP
Trigger: GGGCAAAGCTGTGCACTTGCAGATACATTCATGAGG...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR CAA 90 bp ATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCAGACCCTTTaGCACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGG +
Preference number: 2 (lower is better)
Translates to: IGLAEMKTARDSQTL*HKVQSDPGDRRAVW
Trigger: CCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGTGCAAAAGGGTCTGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CAA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGAGTGTGGGAGGGGTGTaGGTCCCACAGTGGCTGGTC +
Preference number: 3 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKSVGGV*VPQWLV
Trigger: GACCAGCCACTGTGGGACCAACACCCCTCCCACACT...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CAA 90 bp GCATCCTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCGGGGAGCTGGAGGTGTaGGGCAGCTCGGGGGCCTTG +
Preference number: 3 (lower is better)
Translates to: ASWMALVTASPSPRKPRGGELEV*GSSGAL
Trigger: CAAGGCCCCCGAGCTGCCCAACACCTCCAGCTCCCC...GCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAGGATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480326.1
3UTR TCA 72 bp CTCCGTGGGAACCGACTGGCAGAGCCAGGGAGGGAGTaGAGGGGAGGGCAGGAGGAGGTCAGGAAGGCTGAT +
Preference number: 3 (lower is better)
Translates to: LRGNRLAEPGRE*RGGQEEVRKAD
Trigger: ATCAGCCTTCCTGACCTCCTCCTGCCCTCCCCTTCACTCCCTCCCTGGCTCTGCCAGTCGGTTCCCACGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CAA 90 bp GCATCCTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCTCGGGGGCCTTGGGCTaGGCTGTGAGGTTCAGGGGC +
Preference number: 3 (lower is better)
Translates to: ASWMALVTASPSPRKPRGSGALG*AVRFRG
Trigger: GCCCCTGAACCTCACAGCCAAGCCCAAGGCCCCCGA...GCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAGGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480326.1
3UTR-3UTR CAA 90 bp TGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTCGGCAGCTCGGGGGCCTaGGGCTTGGCTGTGAGGTTC +
Preference number: 3 (lower is better)
Translates to: WMALVTASPSPRKPRGRLGSSGA*GLAVRF
Trigger: GAACCTCACAGCCAAGCCCAAGGCCCCCGAGCTGCC...GAGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480326.1
3UTR GCA 72 bp CTCAGCCTGCTCAGCCCATGGCCATACTGCAGTTCCTaGCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGG +
Preference number: 3 (lower is better)
Translates to: LSLLSPWPYCSS*PPRPTAPQEGR
Trigger: CCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGGCCATGGGCTGAGCAGGCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR CCA 72 bp GCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTaGGAGGGGTGTTGGTCCCACAGTGGCTGGTCCAGC +
Preference number: 3 (lower is better)
Translates to: AILVIDEQSGGV*EGCWSHSGWSS
Trigger: GCTGGACCAGCCACTGTGGGACCAACACCCCTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CAA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGGCTGTGCCCATCGAGTaGGGACAAGGTCTTCCCCAG +
Preference number: 3 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRAAVPIE*GQGLPQ
Trigger: CTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGC...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CAA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGTGCAAGTGCACAGCTTaGCCCATCTCTGGGGCACGA +
Preference number: 3 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRACKCTA*PISGAR
Trigger: TCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCA...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR CCA 72 bp GCCCTAAAGGCTGAGGTGCTCAGCCTGCTCAGCCCATaGCCATACTGCAGTTCCTGCCCACCCAGGCCAACA +
Preference number: 3 (lower is better)
Translates to: ALKAEVLSLLSP*PYCSSCPPRPT
Trigger: TGTTGGCCTGGGTGGGCAGGAACTGCAGTATGGCCATGGGCTGAGCAGGCTGAGCACCTCAGCCTTTAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CAA 90 bp CATGGCCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGCTGTGCCCATCGAGTaGGGACAAGGTCTTCCCCAG +
Preference number: 3 (lower is better)
Translates to: HGHTAVPAHPGQQLLRKGAVPIE*GQGLPQ
Trigger: CTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGC...TCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR TCA 72 bp GTCATACAGTGTCCCCTGGCCATAAGCCCTAAAGGCTaGGGTGCTCAGCCTGCTCAGCCCATGGCCATACTG +
Preference number: 3 (lower is better)
Translates to: VIQCPLAISPKG*GAQPAQPMAIL
Trigger: CAGTATGGCCATGGGCTGAGCAGGCTGAGCACCTCAGCCTTTAGGGCTTATGGCCAGGGGACACTGTATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR TCA 72 bp ACAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATaGATGTATCTGCAAGTGCACAGCTTTGCCCATCTC +
Preference number: 3 (lower is better)
Translates to: TAPQEGRAPLPS*MYLQVHSFAHL
Trigger: GAGATGGGCAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CAA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGTGCAAGTGCACAGCTTaGCCCATCTCTGGGGCACGA +
Preference number: 3 (lower is better)
Translates to: THTAARGTIGLAEMKTARCKCTA*PISGAR
Trigger: TCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCA...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR-3UTR CAA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTGACAGCCAGACCCTTTaGCACAAAGTACAAAGCGAT +
Preference number: 3 (lower is better)
Translates to: RSRSGIERHTHRNSATVPDSQTL*HKVQSD
Trigger: ATCGCTTTGTACTTTGTGCAAAAGGGTCTGGCTGTC...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR GCA 72 bp TCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTaGCCATCTCTGGGGCACGAACAAGTCCAAGTACCA +
Preference number: 3 (lower is better)
Translates to: SPLMNVSASAQL*PSLGHEQVQVP
Trigger: TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR CCA 72 bp GCACGAACAAGTCCAAGTACCAACATAGTCTTAGGTTaGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTT +
Preference number: 3 (lower is better)
Translates to: ARTSPSTNIVLG*LAVPIELGQGL
Trigger: AAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTTGGTACTTGGACTTGTTCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGCTGGGAGGCCCGGGCTaGGTCTCCAGGCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKLGGPG*VSRLRF
Trigger: GAACCTCAGCCTGGAGACCCAGCCCGGGCCTCCCAG...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGCTCGTGGGATCAGGTTaGGACCAGGGGCGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKLVGSG*DQGRGH
Trigger: GTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAG...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGGGTGGTGGGTGGCCATaGCCCCAGGCCTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKGGGWP*PQASSP
Trigger: TGGTGAAGAGGCCTGGGGCCATGGCCACCCACCACC...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGCAGCGGCATGCCTGCTaGCCGAGGGTACAGGACATC +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKQRHAC*PRVQDI
Trigger: GATGTCCTGTACCCTCGGGCAGCAGGCATGCCGCTG...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGGGTGGTGGGTGGCCATaGCCCCAGGCCTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRAGGGWP*PQASSP
Trigger: TGGTGAAGAGGCCTGGGGCCATGGCCACCCACCACC...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGTCAGGCTTGGGGAGCTaGAGGTGTTGGGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKSGLGS*RCWAAR
Trigger: CCGAGCTGCCCAACACCTCCAGCTCCCCAAGCCTGA...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGACTGCAGGTCCCGCGTaGGGCCTCCATGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGTAGPA*GLHGWG
Trigger: CCCCCAGCCATGGAGGCCCCACGCGGGACCTGCAGT...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGTACGGAAGGGGGTGTTaGGGGAGCCATCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKYGRGC*GSHPRP
Trigger: GGGCCTTGGATGGCTCCCCCAACACCCCCTTCCGTA...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGTGGGCTCGCCGGTTCTaGGCCCGGGTTCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGWARRF*ARVPGP
Trigger: GGGTCCTGGAACCCGGGCCCAGAACCGGCGAGCCCA...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367204.6
CDS-3UTR CCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGCCCTGGGCTGGAGCTTaGGGGTCAGCACTATCCTGG +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKPWAGA*GSALSW
Trigger: CCAGGATAGTGCTGACCCCCAAGCTCCAGCCCAGGG...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGCAGTCTGGGGGAGTGTaGGAGGGGTGTTGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKQSGGV*EGCWSH
Trigger: GTGGGACCAACACCCCTCCCACACTCCCCCAGACTG...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR CAA 72 bp TCAATCCTCCTGTCCCAACTCCCTCGTGGGATCAGGTaGGGACCAGGGGCGGGGGCACCAGGACAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: SILLSQLPRGIR*GPGAGAPGQSP
Trigger: GGGGCTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGGGACAGGAGGATTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGCTCTGGCGGGCATCCTaGCGCCGGGTCCTCATCAGG +
Preference number: 4 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGLWRAS*RRVLIR
Trigger: CCTGATGAGGACCCGGCGTCAGGATGCCCGCCAGAG...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGCCTCTCCAGGGCCTCTaGCGCTGGCAGGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGPLQGL*RWQEGE
Trigger: CTCCCCTTCCTGCCAGCGTCAGAGGCCCTGGAGAGG...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGTACTTCTCCAGGTGCTaGCGGCTCAGCCGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRAYFSRC*RLSRAC
Trigger: ACAGGCGCGGCTGAGCCGGCAGCACCTGGAGAAGTA...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp CATGGCCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGACCACGCGCAGCCGCTTaGCCTCCACGATGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HGHTAVPAHPGQQLLRKGPRAAA*PPRCRC
Trigger: GCACCTGCATCGTGGAGGGCAAGCGGCTGCGCGTGG...TCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGGCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGATGGGTAAGGCCAGCTaGGAGTCAGGGGTGACAGGC +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKMGKAS*ESGVTG
Trigger: GCCTGTCACCCCTGACTCCCAGCTGGCCTTACCCAT...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGGGGAGCTGGAGGTGTTaGGCAGCTCGGGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGGSWRC*AARGPW
Trigger: CCAAGGCCCCCGAGCTGCCCAACACCTCCAGCTCCC...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTGGGAGCTGGAGGTGTTaGGCAGCTCGGGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LDGFGDSVPFTKEAQRQAGSWRC*AARGPW
Trigger: CCAAGGCCCCCGAGCTGCCCAACACCTCCAGCTCCC...AGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR CCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGATAGTGCTCCACCAGTaGCTGTGCCAGCGGCATGCC +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKIVLHQ*LCQRHA
Trigger: GGCATGCCGCTGGCACAGCCACTGGTGGAGCACTAT...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGCCCTGGGCTGGAGCTTaGGGGTCAGCACTATCCTGG +
Preference number: 4 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRAPWAGA*GSALSW
Trigger: CCAGGATAGTGCTGACCCCCAAGCTCCAGCCCAGGG...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp TGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTCCCTTGGGCTTGGCTGTaGGGTTCAGGGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: WMALVTASPSPRKPRGRLPWAWL*GSGAGR
Trigger: CCTCCCAGCCCCTGAACCTCACAGCCAAGCCCAAGG...GAGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR TCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGGCTGGGTCTCCAGGCTaGGGTTCAGCGGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGAGSPG*GSAAVA
Trigger: AGCCACTGCCGCTGAACCTCAGCCTGGAGACCCAGC...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCCCTCTCCAGGGCCTCTaGCGCTGGCAGGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: QLLRKGGRLSPHECICKCPLQGL*RWQEGE
Trigger: CTCCCCTTCCTGCCAGCGTCAGAGGCCCTGGAGAGG...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGCTGGGTGGGAGAGGCTaGAGCCCAGGAGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRALGGRG*SPGVFS
Trigger: TGAGAAGACTCCTGGGCTTCAGCCTCTCCCACCCAG...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGGAGAAGTGGGGGCTTTaGGGATGGAGAGAAGACGGG +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKEKWGL*GWREDG
Trigger: CCCGTCTTCTCTCCATCCTCAAAGCCCCCACTTCTC...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGGCAGCCATGTTCTTCTaGTCCGAGTGGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKAAMFF*SEWAVR
Trigger: CCTGACAGCCCACTCGGAGCAGAAGAACATGGCTGC...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp CATGGCCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGATACTTCTCCAGGTaGTGCCGGCTCAGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: HGHTAVPAHPGQQLLRKGGYFSR*CRLSRA
Trigger: GGCGCGGCTGAGCCGGCAGCACCTGGAGAAGTATCC...TCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGGCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGTGCCAGCGGCATGCCTaGTGCCCGAGGGTACAGGAC +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGCQRHA*CPRVQD
Trigger: GTCCTGTACCCTCGGGCAGCAGGCATGCCGCTGGCA...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGGCTGTGCCAGCGGCATaGCTGCTGCCCGAGGGTACA +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGAVPAA*LLPEGT
Trigger: TGTACCCTCGGGCAGCAGGCATGCCGCTGGCACAGC...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTTGGGCTGTCAGGAGCTaGTCCCGCAGGGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: LDGFGDSVPFTKEAQRQAWAVRS*SRRVDS
Trigger: GCTGTCCACCCTGCGGGACCAGCTCCTGACAGCCCA...AGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR CCA 90 bp TGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTCGGTGGTGGGTGGCCATaGCCCCAGGCCTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: WMALVTASPSPRKPRGRLGGGWP*PQASSP
Trigger: TGGTGAAGAGGCCTGGGGCCATGGCCACCCACCACC...GAGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR CCA 90 bp CATGGCCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGACCTCCAGCCGCTCCTTaGCTGGGGATGAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: HGHTAVPAHPGQQLLRKGPPAAP*LGMSPG
Trigger: GCCTGGACTCATCCCCAGCCAAGGAGCGGCTGGAGG...TCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGGCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGCGGGACTCGGGGAAGTaGCGGGAGCCATCCATGTCG +
Preference number: 4 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGRDSGK*REPSMS
Trigger: CGACATGGATGGCTCCCGCCACTTCCCCGAGTCCCG...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGAAGTCCAGCTTCTCCTaGCTTCCAGAGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKKSSFS*LPEAAS
Trigger: GGAGGCTGCCTCTGGAAGCCAGGAGAAGCTGGACTT...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGTACGAGGCTGACCGCTaGGCTCTGGGCTCAGACCTG +
Preference number: 4 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGYEADR*ALGSDL
Trigger: CAGGTCTGAGCCCAGAGCTCAGCGGTCAGCCTCGTA...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367204.6
CDS-3UTR GCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGCGGGCAAGCTCCATCTaGTGCTGCTGCTTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKRASSI*CCCFSN
Trigger: GTTTGAGAAGCAGCAGCAGCAGATGGAGCTTGCCCG...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp CATGGCCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGCGGGGCACACAGCTaGTCATCTTCAGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HGHTAVPAHPGQQLLRKGGGAHS*SSSGLG
Trigger: CCCCAAGCCTGAAGATGAGCAGCTGTGTGCCCCGCC...TCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCGCCCCACTGTGGCTGTaGAGCAGCTGCCGAGCATCC +
Preference number: 4 (lower is better)
Translates to: QLLRKGGRLSPHECICKCAPLWL*SSCRAS
Trigger: GGATGCTCGGCAGCTGCTGCACAGCCACAGTGGGGC...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGGCTTCCTCCAGTGGGTaGACACAGCCGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGASSSG*TQPSSS
Trigger: GCTGGAGGACGGCTGTGTGCACCCACTGGAGGAAGC...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCTGCCAGCGGCATGCCTaGTGCCCGAGGGTACAGGAC +
Preference number: 4 (lower is better)
Translates to: QLLRKGGRLSPHECICKCCQRHA*CPRVQD
Trigger: GTCCTGTACCCTCGGGCAGCAGGCATGCCGCTGGCA...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTCCGGCCCGCCCTCCCTaGTCTTCGGCTCTCACGCTC +
Preference number: 4 (lower is better)
Translates to: RSRSGIERHTHRNSATVPPARPP*SSALTL
Trigger: GAGCGTGAGAGCCGAAGAGCAGGGAGGGCGGGCCGG...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367204.6
CDS-3UTR GCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGGCAAGTGCACAGCTTTaGCCATCTCTGGGGCACGAA +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKASAQL*PSLGHE
Trigger: TTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGC...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGTTCTTCTGCTCCGAGTaGGCTGTCAGGAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRAFFCSE*AVRSWS
Trigger: GGACCAGCTCCTGACAGCCCACTCGGAGCAGAAGAA...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTTCAGGCTTGGGGAGCTaGAGGTGTTGGGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: LDGFGDSVPFTKEAQRQASGLGS*RCWAAR
Trigger: CCGAGCTGCCCAACACCTCCAGCTCCCCAAGCCTGA...AGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR CCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTACTGCAGGTCCCGCGTaGGGCCTCCATGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RSRSGIERHTHRNSATVPTAGPA*GLHGWG
Trigger: CCCCCAGCCATGGAGGCCCCACGCGGGACCTGCAGT...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGTGGTGCAGTTCACCATaGTGCCAACGCCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRAWCSSP*CQRHPG
Trigger: CCCTGGATGGCGTTGGCACCATGGTGAACTGCACCA...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGGCAGTGGCTGAGCCCTaGGGGGCCTCGTGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALAVAEP*GASWQG
Trigger: GCCTTGCCACGAGGCCCCCCAGGGCTCAGCCACTGC...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGTGGTCCCACAGTGGCTaGTCCAGCCAGGACAAGAAT +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKWSHSG*SSQDKN
Trigger: ATTCTTGTCCTGGCTGGACCAGCCACTGTGGGACCA...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGACAGCTGGTGAATCATaGCCAGAAGCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKTAGES*PEAGAP
Trigger: AGGAGCTCCAGCTTCTGGTCATGATTCACCAGCTGT...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGATAAGCCCTAAAGGCTaGGGTGCTCAGCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRAISPKG*GAQPAQ
Trigger: CTGAGCAGGCTGAGCACCTCAGCCTTTAGGGCTTAT...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCTACTTCTCCAGGTGCTaGCGGCTCAGCCGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: QLLRKGGRLSPHECICKCYFSRC*RLSRAC
Trigger: ACAGGCGCGGCTGAGCCGGCAGCACCTGGAGAAGTA...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTCATGGGTAAGGCCAGCTaGGAGTCAGGGGTGACAGGC +
Preference number: 4 (lower is better)
Translates to: WMALVTASPSPRKPRGRLMGKAS*ESGVTG
Trigger: GCCTGTCACCCCTGACTCCCAGCTGGCCTTACCCAT...GAGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR CCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGGGGAGCTGGAGGTGTTaGGCAGCTCGGGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALGSWRC*AARGPW
Trigger: CCAAGGCCCCCGAGCTGCCCAACACCTCCAGCTCCC...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGCATGGCTTCCTCCAGTaGGTGCACACAGCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGHGFLQ*VHTAVL
Trigger: GAGGACGGCTGTGTGCACCCACTGGAGGAAGCCATG...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCTCCGTGGGAACCGACTaGCAGAGCCAGGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: QLLRKGGRLSPHECICKCSVGTD*QSQGGS
Trigger: ACTCCCTCCCTGGCTCTGCCAGTCGGTTCCCACGGA...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp CTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTTTGCAGGGAATGGGCTaGATGGGTAAGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LDGFGDSVPFTKEAQRQALQGMG*MGKASW
Trigger: CCAGCTGGCCTTACCCATTCAGCCCATTCCCTGCAA...AGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR TCA 90 bp GCATCCTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCCCTGGATGGCTTTGGTaGCAGCGTCCCCTTCACCAA +
Preference number: 4 (lower is better)
Translates to: ASWMALVTASPSPRKPRGPGWLW*QRPLHQ
Trigger: TTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAGG...GCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR TCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGCCTGGATGGCTTTGGTaGCAGCGTCCCCTTCACCAA +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGPGWLW*QRPLHQ
Trigger: TTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAGG...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCACTCTGGCGGGCATCCTaGCGCCGGGTCCTCATCAGG +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPLWRAS*RRVLIR
Trigger: CCTGATGAGGACCCGGCGTCAGGATGCCCGCCAGAG...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGGAGAAGTGGGGGCTTTaGGGATGGAGAGAAGACGGG +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGEKWGL*GWREDG
Trigger: CCCGTCTTCTCTCCATCCTCAAAGCCCCCACTTCTC...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp GCATCCTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCGCAGCCATGTTCTTCTaGTCCGAGTGGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: ASWMALVTASPSPRKPRGAAMFF*SEWAVR
Trigger: CCTGACAGCCCACTCGGAGCAGAAGAACATGGCTGC...GCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR GCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGCCTCCACGATGCAGGTaGGCTTGGGCCGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALPPRCR*AWAAAC
Trigger: ACAAGCCGCGGCCCAAGCGCACCTGCATCGTGGAGG...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCAGCTTGCCCTCCACGATaGAGGTGCGCTTGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPACPPR*RCAWAA
Trigger: CGCGGCCCAAGCGCACCTGCATCGTGGAGGGCAAGC...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCGCTTGCCCTCCACGATaGAGGTGCGCTTGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPACPPR*RCAWAA
Trigger: CGCGGCCCAAGCGCACCTGCATCGTGGAGGGCAAGC...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGGCTGTGCCAGCGGCATaGCTGCTGCCCGAGGGTACA +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALAVPAA*LLPEGT
Trigger: TGTACCCTCGGGCAGCAGGCATGCCGCTGGCACAGC...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGTTGCGGCCGTCTCCCTaGCTTCCGCGGTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALLRPSP*LPRSCS
Trigger: AGAGCAGGACCGCGGAAGGCAGGGAGACGGCCGCAA...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367204.6
CDS-3UTR GCA 90 bp GCATCCTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCGGGCTGTGCAGCAGCTaGAGCGGATACTCCACTATG +
Preference number: 4 (lower is better)
Translates to: ASWMALVTASPSPRKPRGGLCSS*SGYSTM
Trigger: CATAGTGGAGTATCCGCTGCAGCTGCTGCACAGCCC...GCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR CCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGTTCTTCTGCTCCGAGTaGGCTGTCAGGAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGFFCSE*AVRSWS
Trigger: GGACCAGCTCCTGACAGCCCACTCGGAGCAGAAGAA...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTCTTCTTCTGCTCCGAGTaGGCTGTCAGGAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: WMALVTASPSPRKPRGRLFFCSE*AVRSWS
Trigger: GGACCAGCTCCTGACAGCCCACTCGGAGCAGAAGAA...GAGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR CCA 90 bp CATGGCCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGATGGTGCAGTTCACCATaGTGCCAACGCCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: HGHTAVPAHPGQQLLRKGWCSSP*CQRHPG
Trigger: CCCTGGATGGCGTTGGCACCATGGTGAACTGCACCA...TCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGAGCCTCCGACACTCCTaGTCTCTTGGGTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGSLRHS*SLGFWG
Trigger: TCCCCAGAACCCAAGAGACCAGGAGTGTCGGAGGCT...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CATGGCCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGTGTTGGTCCCACAGTaGCTGGTCCAGCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: HGHTAVPAHPGQQLLRKGVLVPQ*LVQPGQ
Trigger: TTGTCCTGGCTGGACCAGCCACTGTGGGACCAACAC...TCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCTCGTGGGATCAGGTTaGGACCAGGGGCGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPLVGSG*DQGRGH
Trigger: GTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAG...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGAGGGTGGACAGCTGGTaGATCATGACCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGRVDSW*IMTRSW
Trigger: CCAGCTTCTGGTCATGATTCACCAGCTGTCCACCCT...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp GCATCCTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGGTGGACAGCTGGTaGATCATGACCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: ASWMALVTASPSPRKPRGRVDSW*IMTRSW
Trigger: CCAGCTTCTGGTCATGATTCACCAGCTGTCCACCCT...GCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR TCA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCCTTGGGCTTGGCTGTaGGGTTCAGGGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPPWAWL*GSGAGR
Trigger: CCTCCCAGCCCCTGAACCTCACAGCCAAGCCCAAGG...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp TGTATCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTCAGGGCCTACGAGGCTaGCCGCTGAGCTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: CICKCTALPISGARTSPSQGLRG*PLSSGL
Trigger: GAGCCCAGAGCTCAGCGGTCAGCCTCGTAGGCCCTG...ACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367204.6
CDS-3UTR TCA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCGCTGGGTCTCCAGGCTaGGGTTCAGCGGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPAGSPG*GSAAVA
Trigger: AGCCACTGCCGCTGAACCTCAGCCTGGAGACCCAGC...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp CATGGCCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGCGCCTCTCCCCTCATaGATGTATCTGCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: HGHTAVPAHPGQQLLRKGAPLPS*MYLQVH
Trigger: GTGCACTTGCAGATACATTCATGAGGGGAGAGGCGC...TCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp TGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTCCGGGCAAGCTCCATCTaGTGCTGCTGCTTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: WMALVTASPSPRKPRGRLRASSI*CCCFSN
Trigger: GTTTGAGAAGCAGCAGCAGCAGATGGAGCTTGCCCG...GAGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR GCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGGGCGGGGCACACAGCTaGTCATCTTCAGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALGGAHS*SSSGLG
Trigger: CCCCAAGCCTGAAGATGAGCAGCTGTGTGCCCCGCC...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGGCCCCACTGTGGCTGTaGAGCAGCTGCCGAGCATCC +
Preference number: 4 (lower is better)
Translates to: TKYKAILVIDEQSGGVWEAPLWL*SSCRAS
Trigger: GGATGCTCGGCAGCTGCTGCACAGCCACAGTGGGGC...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGCCTCCACGATGCAGGTaGGCTTGGGCCGCGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TKYKAILVIDEQSGGVWEPPRCR*AWAAAC
Trigger: ACAAGCCGCGGCCCAAGCGCACCTGCATCGTGGAGG...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCATGCCTTCCGCGGTCCTaGTCTGCGACTCGTCGGACG +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPCLPRS*SATRRT
Trigger: CGTCCGACGAGTCGCAGAGCAGGACCGCGGAAGGCA...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367204.6
CDS-3UTR CCA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCTGGGCTGTCAGGAGCTaGTCCCGCAGGGTGGACAGC +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPWAVRS*SRRVDS
Trigger: GCTGTCCACCCTGCGGGACCAGCTCCTGACAGCCCA...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTAGGGAATGGGCTGAATaGGTAAGGCCAGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LDGFGDSVPFTKEAQRQAREWAE*VRPAGS
Trigger: ACTCCCAGCTGGCCTTACCCATTCAGCCCATTCCCT...AGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR CCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCACCTCCAGCCGCTCCTTaGCTGGGGATGAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPPPAAP*LGMSPG
Trigger: GCCTGGACTCATCCCCAGCCAAGGAGCGGCTGGAGG...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCAGTTCCAAGCCGGGACTaGAGAAGGGCGCTCGCGGCT +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPVPSRD*RRALAA
Trigger: AGCCGCGAGCGCCCTTCTCCAGTCCCGGCTTGGAAC...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367204.6
CDS-3UTR CCA 90 bp TGTATCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTCTCTGCCCTCTGCCCTaGGCTTGCGGCCGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: CICKCTALPISGARTSPSLCPLP*ACGRLP
Trigger: AGGGAGACGGCCGCAAGCCCAGGGCAGAGGGCAGAG...ACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367204.6
CDS-3UTR CCA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGAGATGGGGCTCCTCATaGACATCTACTCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGRWGSS*TSTQPG
Trigger: GCCTGGCTGAGTAGATGTCCATGAGGAGCCCCATCT...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367204.6
CDS-3UTR CCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGCAGTGGCTGAGCCCTaGGGGGCCTCGTGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: THTAARGTIGLAEMKTARAVAEP*GASWQG
Trigger: GCCTTGCCACGAGGCCCCCCAGGGCTCAGCCACTGC...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCGAAATTCCCCTGGGCTaGAGCTTGGGGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: QLLRKGGRLSPHECICKCEIPLG*SLGVST
Trigger: AGTGCTGACCCCCAAGCTCCAGCCCAGGGGAATTTC...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGGGACCCATTACCCTCTaGAGAGCTACAGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGGPITL*RATVPG
Trigger: TCCTGGGACTGTAGCTCTCCAGAGGGTAATGGGTCC...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGTGGTCTCTTGGGTTCTaGGGACCCATTACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGWSLGF*GPITLW
Trigger: CCAGAGGGTAATGGGTCCCCAGAACCCAAGAGACCA...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCAGCCTGCTCAGCCCATaGCCATACTGCAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QLLRKGGRLSPHECICKCSLLSP*PYCSSC
Trigger: GCAGGAACTGCAGTATGGCCATGGGCTGAGCAGGCT...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCGTGTTGGTCCCACAGTaGCTGGTCCAGCCAGGACAA +
Preference number: 4 (lower is better)
Translates to: QLLRKGGRLSPHECICKCVLVPQ*LVQPGQ
Trigger: TTGTCCTGGCTGGACCAGCCACTGTGGGACCAACAC...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGCTCAGCAACAGTGCCTaGCACGTAGTGGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGLSNSA*HVVGTQ
Trigger: TTGAGTGCCCACTACGTGCCAGGCACTGTTGCTGAG...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp CTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTACAGCTGGTGAATCATaGCCAGAAGCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LDGFGDSVPFTKEAQRQATAGES*PEAGAP
Trigger: AGGAGCTCCAGCTTCTGGTCATGATTCACCAGCTGT...AGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR GCA 90 bp CTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTATCAGCTGCTGCTGCTaGTTTGCAATCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LDGFGDSVPFTKEAQRQAISCCC*FAICSC
Trigger: GCAGGAGCAGATTGCAAAGCAGCAGCAGCAGCTGAT...AGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR GCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGTCCGCGGTCCTGCTCTaGGACTCGTCGGACGCGCAG +
Preference number: 4 (lower is better)
Translates to: THTAARGTIGLAEMKTARSAVLL*DSSDAQ
Trigger: CTGCGCGTCCGACGAGTCGCAGAGCAGGACCGCGGA...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367204.6
CDS-3UTR GCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCGCAAGTGCACAGCTTTaGCCATCTCTGGGGCACGAA +
Preference number: 4 (lower is better)
Translates to: QLLRKGGRLSPHECICKCASAQL*PSLGHE
Trigger: TTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGC...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGACAGCCAGACCCTTTTaGACAAAGTACAAAGCGATC +
Preference number: 4 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKTARPF*TKYKAI
Trigger: GATCGCTTTGTACTTTGTGCAAAAGGGTCTGGCTGT...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGATGGGTAAGGCCAGCTaGGAGTCAGGGGTGACAGGC +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALMGKAS*ESGVTG
Trigger: GCCTGTCACCCCTGACTCCCAGCTGGCCTTACCCAT...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGTCAGGCTTGGGGAGCTaGAGGTGTTGGGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: TKYKAILVIDEQSGGVWESGLGS*RCWAAR
Trigger: CCGAGCTGCCCAACACCTCCAGCTCCCCAAGCCTGA...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCTACGGAAGGGGGTGTTaGGGGAGCCATCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPYGRGC*GSHPRP
Trigger: GGGCCTTGGATGGCTCCCCCAACACCCCCTTCCGTA...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGCATGGCTTCCTCCAGTaGGTGCACACAGCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALHGFLQ*VHTAVL
Trigger: GAGGACGGCTGTGTGCACCCACTGGAGGAAGCCATG...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCTGGTCCCACAGTGGCTaGTCCAGCCAGGACAAGAAT +
Preference number: 4 (lower is better)
Translates to: QLLRKGGRLSPHECICKCWSHSG*SSQDKN
Trigger: ATTCTTGTCCTGGCTGGACCAGCCACTGTGGGACCA...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGGATAGACGAGCAGTCTaGGGGAGTGTGGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALDRRAV*GSVGGV
Trigger: CACCCCTCCCACACTCCCCCAGACTGCTCGTCTATC...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGTCCGTGGGAACCGACTaGCAGAGCCAGGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: TKYKAILVIDEQSGGVWESVGTD*QSQGGS
Trigger: ACTCCCTCCCTGGCTCTGCCAGTCGGTTCCCACGGA...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp GCATCCTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCTGCTGGATCTGCTGCTaGAGGAGGTTGATCTTATGC +
Preference number: 4 (lower is better)
Translates to: ASWMALVTASPSPRKPRGCWICC*RRLILC
Trigger: GCATAAGATCAACCTCCTTCAGCAGCAGATCCAGCA...GCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR TCA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGTGCTGGATCTGCTGCTaGAGGAGGTTGATCTTATGC +
Preference number: 4 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGCWICC*RRLILC
Trigger: GCATAAGATCAACCTCCTTCAGCAGCAGATCCAGCA...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGCCTTGGGCTTGGCTGTaGGGTTCAGGGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: THTAARGTIGLAEMKTARPWAWL*GSGAGR
Trigger: CCTCCCAGCCCCTGAACCTCACAGCCAAGCCCAAGG...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGCTCCTTGGCTGGGGATaGGTCCAGGCTGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: TKYKAILVIDEQSGGVWELLGWG*VQADEV
Trigger: GACCTCATCAGCCTGGACTCATCCCCAGCCAAGGAG...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCACTCCTTGGCTGGGGATaGGTCCAGGCTGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPLLGWG*VQADEV
Trigger: GACCTCATCAGCCTGGACTCATCCCCAGCCAAGGAG...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCACTGGGTGGGAGAGGCTaGAGCCCAGGAGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPLGGRG*SPGVFS
Trigger: TGAGAAGACTCCTGGGCTTCAGCCTCTCCCACCCAG...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp TGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTCTCCATCTGCTGCTGCTaGTTCTCAAACAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: WMALVTASPSPRKPRGRLSICCC*FSNSMA
Trigger: TGCCATGCTGTTTGAGAAGCAGCAGCAGCAGATGGA...GAGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR GCA 90 bp CTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTAGCTCCATCTGCTGCTaGTGCTTCTCAAACAGCATG +
Preference number: 4 (lower is better)
Translates to: LDGFGDSVPFTKEAQRQASSICC*CFSNSM
Trigger: CATGCTGTTTGAGAAGCAGCAGCAGCAGATGGAGCT...AGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR GCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCATCAGCTGCTGCTGCTaGTTTGCAATCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QLLRKGGRLSPHECICKCISCCC*FAICSC
Trigger: GCAGGAGCAGATTGCAAAGCAGCAGCAGCAGCTGAT...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCATGGCTGTGCAGCAGCTaGCGAGCATCCTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPWLCSS*RASWMA
Trigger: AGCCATCCAGGATGCTCGGCAGCTGCTGCACAGCCA...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGTGGCTGTGCAGCAGCTaGCGAGCATCCTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: TKYKAILVIDEQSGGVWEWLCSS*RASWMA
Trigger: AGCCATCCAGGATGCTCGGCAGCTGCTGCACAGCCA...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGGATACTTCTCCAGGTaGTGCCGGCTCAGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: THTAARGTIGLAEMKTARGYFSR*CRLSRA
Trigger: GGCGCGGCTGAGCCGGCAGCACCTGGAGAAGTATCC...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGAGAAATAGAGGGCCTTaGAGAGAGACGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGRNRGP*RETRTE
Trigger: CTCTGTCCTCGTCTCTCTGCAAGGCCCTCTATTTCT...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp GCATCCTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCATCATGACCAGAAGCTaGAGCTCCTTCTCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: ASWMALVTASPSPRKPRGIMTRS*SSFSAR
Trigger: CCTAGCAGAGAAGGAGCTCCAGCTTCTGGTCATGAT...GCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR CCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGTGTCGCAGCTCAGCATaGCTTCCTCCAGTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALCRSSA*LPPVGA
Trigger: TGCACCCACTGGAGGAAGCCATGCTGAGCTGCGACA...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGCGGGACTCGGGGAAGTaGCGGGAGCCATCCATGTCG +
Preference number: 4 (lower is better)
Translates to: THTAARGTIGLAEMKTARRDSGK*REPSMS
Trigger: CGACATGGATGGCTCCCGCCACTTCCCCGAGTCCCG...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGCTGACCGCTGAGCTCTaGGCTCAGACCTGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: THTAARGTIGLAEMKTARLTAEL*AQTWAR
Trigger: GCGAGCCCAGGTCTGAGCCCAGAGCTCAGCGGTCAG...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367204.6
CDS-3UTR CCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGAACATAGTCTTAGGTTaGCTGGCTGTGCCCATCGAG +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGNIVLG*LAVPIE
Trigger: CTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGAGCCTGCTCAGCCCATaGCCATACTGCAGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALSLLSP*PYCSSC
Trigger: GCAGGAACTGCAGTATGGCCATGGGCTGAGCAGGCT...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCAGATAGACGAGCAGTCTaGGGGAGTGTGGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPDRRAV*GSVGGV
Trigger: CACCCCTCCCACACTCCCCCAGACTGCTCGTCTATC...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCAGTCCCAACTCCCTCGTaGGATCAGGTTGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPVPTPS*DQVGTR
Trigger: CCTGGTCCCAACCTGATCCCACGAGGGAGTTGGGAC...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTCCAAGGAGAAAAGTCCTaGTTTGCAGGGAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: WMALVTASPSPRKPRGRLQGEKS*FAGNGL
Trigger: CAGCCCATTCCCTGCAAACCAGGACTTTTCTCCTTG...GAGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480326.1
3UTR CAA 72 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTaGGGACAAGGTCTTCCCCAGAGGAGAAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIE*GQGLPQRRRGQ
Trigger: CTGGCCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCATTGCAGGGAATGGGCTaGATGGGTAAGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPLQGMG*MGKASW
Trigger: CCAGCTGGCCTTACCCATTCAGCCCATTCCCTGCAA...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCATTGCAGGGAATGGGCTaGATGGGTAAGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPLQGMG*MGKASW
Trigger: CCAGCTGGCCTTACCCATTCAGCCCATTCCCTGCAA...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGCCTGGATGGCTTTGGTaGCAGCGTCCCCTTCACCAA +
Preference number: 4 (lower is better)
Translates to: TKYKAILVIDEQSGGVWEPGWLW*QRPLHQ
Trigger: TTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAGG...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCACGTTCATGGGCCTCTTaGTGTGGCTGCTGTTTCGGG +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPRSWAS*CGCCFG
Trigger: CCCGAAACAGCAGCCACATCAAGAGGCCCATGAACG...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCGTTCATGGGCCTCTTaGTGTGGCTGCTGTTTCGGG +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPRSWAS*CGCCFG
Trigger: CCCGAAACAGCAGCCACATCAAGAGGCCCATGAACG...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGATAAGCCCTAAAGGCTaGGGTGCTCAGCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALISPKG*GAQPAQ
Trigger: CTGAGCAGGCTGAGCACCTCAGCCTTTAGGGCTTAT...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCAGCAGCCATGTTCTTCTaGTCCGAGTGGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPAAMFF*SEWAVR
Trigger: CCTGACAGCCCACTCGGAGCAGAAGAACATGGCTGC...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCTCCATCTGCTGCTGCTaGTTCTCAAACAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: QLLRKGGRLSPHECICKCSICCC*FSNSMA
Trigger: TGCCATGCTGTTTGAGAAGCAGCAGCAGCAGATGGA...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCTGCAGTTCACCATGGTaGCAACGCCATCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPCSSPW*QRHPGP
Trigger: TGGCCCTGGATGGCGTTGGCACCATGGTGAACTGCA...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCCATACTGCAGTTCCTaGCCACCCAGGCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPPYCSS*PPRPTA
Trigger: AGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCACTGAGGTGCTCAGCCTaGTCAGCCCATGGCCATACT +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPLRCSA*SAHGHT
Trigger: AGTATGGCCATGGGCTGAGCAGGCTGAGCACCTCAG...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTGGAATAAAGACCAGCTaGCATGGACAGCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RSRSGIERHTHRNSATVPGIKTS*HGQPLS
Trigger: GGAGAGGGGCTGTCCATGGCAGCTGGTCTTTATTCC...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTAGGGAATGGGCTGAATaGGTAAGGCCAGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: RSRSGIERHTHRNSATVPREWAE*VRPAGS
Trigger: ACTCCCAGCTGGCCTTACCCATTCAGCCCATTCCCT...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTATGGGCCTCTTGATGTaGCTGCTGTTTCGGGACTCG +
Preference number: 4 (lower is better)
Translates to: RSRSGIERHTHRNSATVPMGLLM*LLFRDS
Trigger: CGAGTCCCGAAACAGCAGCCACATCAAGAGGCCCAT...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TGTATCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTATAGTGCTCCACCAGTaGCTGTGCCAGCGGCATGCC +
Preference number: 4 (lower is better)
Translates to: CICKCTALPISGARTSPSIVLHQ*LCQRHA
Trigger: GGCATGCCGCTGGCACAGCCACTGGTGGAGCACTAT...ACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCACGATCACAGGCATGTTaGGGTCCAGGCTACGAGGGA +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPRSQAC*GPGYEG
Trigger: TCCCTCGTAGCCTGGACCCCAACATGCCTGTGATCG...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCAGAAATTCCCCTGGGCTaGAGCTTGGGGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPEIPLG*SLGVST
Trigger: AGTGCTGACCCCCAAGCTCCAGCCCAGGGGAATTTC...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGAGCCTCCGACACTCCTaGTCTCTTGGGTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TKYKAILVIDEQSGGVWESLRHS*SLGFWG
Trigger: TCCCCAGAACCCAAGAGACCAGGAGTGTCGGAGGCT...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCAAAGTCCAGCTTCTCCTaGCTTCCAGAGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPKSSFS*LPEAAS
Trigger: GGAGGCTGCCTCTGGAAGCCAGGAGAAGCTGGACTT...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGCAGCTTCTCTATGGCTaGCACCACTTCTTTCAAATT +
Preference number: 4 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRAQLLYG*HHFFQI
Trigger: AATTTGAAAGAAGTGGTGCCAGCCATAGAGAAGCTG...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGTCTGCTAGGCTCTCTTaGGTCCCTTTGACATCTTTG +
Preference number: 4 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGSARLS*VPLTSL
Trigger: CAAAGATGTCAAAGGGACCCAAGAGAGCCTAGCAGA...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGTCTGCTAGGCTCTCTTaGGTCCCTTTGACATCTTTG +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGSARLS*VPLTSL
Trigger: CAAAGATGTCAAAGGGACCCAAGAGAGCCTAGCAGA...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTCTGTGCCCATCGAGTTaGGACAAGGTCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: RSRSGIERHTHRNSATVPLCPSS*DKVFPR
Trigger: TCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAG...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGTGTGGGAGGGGTGTTaGTCCCACAGTGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: THTAARGTIGLAEMKTARVWEGC*SHSGWS
Trigger: GGACCAGCCACTGTGGGACCAACACCCCTCCCACAC...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTGCGGATACTCCACTATaGAAAAGGCAGCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LDGFGDSVPFTKEAQRQAADTPL*KRQQGE
Trigger: TTCTCCTTGCTGCCTTTTCCATAGTGGAGTATCCGC...AGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR TCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGACAGCTGGTGAATCATaGCCAGAAGCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALTAGES*PEAGAP
Trigger: AGGAGCTCCAGCTTCTGGTCATGATTCACCAGCTGT...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCAAGGGTACAGGACATCTaGGGAGCTCATCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPRVQDI*GAHLHL
Trigger: CAGGTGCAGATGAGCTCCTCAGATGTCCTGTACCCT...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCAAGGGTACAGGACATCTaGGGAGCTCATCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPRVQDI*GAHLHL
Trigger: CAGGTGCAGATGAGCTCCTCAGATGTCCTGTACCCT...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCGCGCCTCTCCCCTCATaGATGTATCTGCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPAPLPS*MYLQVH
Trigger: GTGCACTTGCAGATACATTCATGAGGGGAGAGGCGC...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCACGGGCAAGCTCCATCTaGTGCTGCTGCTTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPRASSI*CCCFSN
Trigger: GTTTGAGAAGCAGCAGCAGCAGATGGAGCTTGCCCG...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGGAATGTATCTGCAAGTaGACAGCTTTGCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGECICK*TALPIS
Trigger: AGAGATGGGCAAAGCTGTGCACTTGCAGATACATTC...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCAGGAATAAAGACCAGCTaGCATGGACAGCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPGIKTS*HGQPLS
Trigger: GGAGAGGGGCTGTCCATGGCAGCTGGTCTTTATTCC...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCAAGGGAATGGGCTGAATaGGTAAGGCCAGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPREWAE*VRPAGS
Trigger: ACTCCCAGCTGGCCTTACCCATTCAGCCCATTCCCT...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCACAGCGGATACTCCACTaGTTTGCAGGGAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPQRILH*FAGNGL
Trigger: CAGCCCATTCCCTGCAAACCAGTGGAGTATCCGCTG...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGCAGCGGATACTCCACTaGTTTGCAGGGAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: TKYKAILVIDEQSGGVWEQRILH*FAGNGL
Trigger: CAGCCCATTCCCTGCAAACCAGTGGAGTATCCGCTG...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TGTATCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTCGATCACAGGCATGTTaGGGTCCAGGCTACGAGGGA +
Preference number: 4 (lower is better)
Translates to: CICKCTALPISGARTSPSRSQAC*GPGYEG
Trigger: TCCCTCGTAGCCTGGACCCCAACATGCCTGTGATCG...ACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCATGGTCTCTTGGGTTCTaGGGACCCATTACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPWSLGF*GPITLW
Trigger: CCAGAGGGTAATGGGTCCCCAGAACCCAAGAGACCA...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGCTGTGCCCATCGAGTTaGGACAAGGTCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: TKYKAILVIDEQSGGVWELCPSS*DKVFPR
Trigger: TCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAG...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCACTAAAAATGGCTCCGTaGGAACCGACTGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPLKMAP*EPTGRA
Trigger: GGCTCTGCCAGTCGGTTCCCACGGAGCCATTTTTAG...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGTCCCAACTCCCTCGTaGGATCAGGTTGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: THTAARGTIGLAEMKTARVPTPS*DQVGTR
Trigger: CCTGGTCCCAACCTGATCCCACGAGGGAGTTGGGAC...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGAGCTCCATCTGCTGCTaGTGCTTCTCAAACAGCATG +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALSSICC*CFSNSM
Trigger: CATGCTGTTTGAGAAGCAGCAGCAGCAGATGGAGCT...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTAGCTCCATCTGCTGCTaGTGCTTCTCAAACAGCATG +
Preference number: 4 (lower is better)
Translates to: RSRSGIERHTHRNSATVPSSICC*CFSNSM
Trigger: CATGCTGTTTGAGAAGCAGCAGCAGCAGATGGAGCT...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGATGTCTGGGAAGGCTTaGAGGATCTTCCTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: TKYKAILVIDEQSGGVWEMSGKA*RIFLRS
Trigger: TGAGCGGAGGAAGATCCTGCAAGCCTTCCCAGACAT...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCAATGTCTGGGAAGGCTTaGAGGATCTTCCTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPMSGKA*RIFLRS
Trigger: TGAGCGGAGGAAGATCCTGCAAGCCTTCCCAGACAT...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGCTGAGGTGCTCAGCCTaGTCAGCCCATGGCCATACT +
Preference number: 4 (lower is better)
Translates to: THTAARGTIGLAEMKTARLRCSA*SAHGHT
Trigger: AGTATGGCCATGGGCTGAGCAGGCTGAGCACCTCAG...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGATCATGACCAGAAGCTaGAGCTCCTTCTCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: RKGGRLSPHECICKCTALIMTRS*SSFSAR
Trigger: CCTAGCAGAGAAGGAGCTCCAGCTTCTGGTCATGAT...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGCCAGCTGGGCAGAGATaGGGCTCCTCATGGACATCT +
Preference number: 4 (lower is better)
Translates to: THTAARGTIGLAEMKTARPAGQR*GSSWTS
Trigger: AGATGTCCATGAGGAGCCCCATCTCTGCCCAGCTGG...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367204.6
CDS-3UTR CCA 90 bp TGTATCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTGGACCCATTACCCTCTaGAGAGCTACAGTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CICKCTALPISGARTSPSGPITL*RATVPG
Trigger: TCCTGGGACTGTAGCTCTCCAGAGGGTAATGGGTCC...ACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAACAGCTTCTCTATaGCTGGCACCACTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QLLRKGGRLSPHECICKCTTASL*LAPLLS
Trigger: TGAAAGAAGTGGTGCCAGCCATAGAGAAGCTGTTGT...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCAAGCTTTGCCCATCTCTaGGGCACGAACAAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPSFAHL*GTNKSK
Trigger: CTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCT...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCAAGCTTTGCCCATCTCTaGGGCACGAACAAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPSFAHL*GTNKSK
Trigger: CTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCT...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCATGCCATACCCCAGGTaGATAGACACCTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPMPYPR*IDTCRR
Trigger: TCTCCTGCAGGTGTCTATCCACCTGGGGTATGGCAT...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCAATGCCATACCCCAGGTaGATAGACACCTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPMPYPR*IDTCRR
Trigger: TCTCCTGCAGGTGTCTATCCACCTGGGGTATGGCAT...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TGTATCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTCTCAGCAACAGTGCCTaGCACGTAGTGGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: CICKCTALPISGARTSPSLSNSA*HVVGTQ
Trigger: TTGAGTGCCCACTACGTGCCAGGCACTGTTGCTGAG...ACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR CAA 72 bp GGCACGAACAAGTCCAAGTACCAACATAGTCTTAGGTaGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GTNKSKYQHSLR*AGCAHRVGTRS
Trigger: AGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTTGGTACTTGGACTTGTTCGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCAGGACACACAGAACCTaGGACACCCAGACTGACAAA +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPRTHRT*DTQTDK
Trigger: TTTGTCAGTCTGGGTGTCTCAGGTTCTGTGTGTCCT...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCAAGGACACACAGAACCTaGGACACCCAGACTGACAAA +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPRTHRT*DTQTDK
Trigger: TTTGTCAGTCTGGGTGTCTCAGGTTCTGTGTGTCCT...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp TGTATCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTATCAGCTGCTGCTGCTaGTTTGCAATCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CICKCTALPISGARTSPSISCCC*FAICSC
Trigger: GCAGGAGCAGATTGCAAAGCAGCAGCAGCAGCTGAT...ACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCAAGAAATAGAGGGCCTTaGAGAGAGACGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPRNRGP*RETRTE
Trigger: CTCTGTCCTCGTCTCTCTGCAAGGCCCTCTATTTCT...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCATCATGACCAGAAGCTaGAGCTCCTTCTCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPIMTRS*SSFSAR
Trigger: CCTAGCAGAGAAGGAGCTCCAGCTTCTGGTCATGAT...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGATGGGCCTCTTGATGTaGCTGCTGTTTCGGGACTCG +
Preference number: 4 (lower is better)
Translates to: THTAARGTIGLAEMKTARMGLLM*LLFRDS
Trigger: CGAGTCCCGAAACAGCAGCCACATCAAGAGGCCCAT...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCAAACATAGTCTTAGGTTaGCTGGCTGTGCCCATCGAG +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPNIVLG*LAVPIE
Trigger: CTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGCTAAAAATGGCTCCGTaGGAACCGACTGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: THTAARGTIGLAEMKTARLKMAP*EPTGRA
Trigger: GGCTCTGCCAGTCGGTTCCCACGGAGCCATTTTTAG...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp TGTATCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTTGCTGGATCTGCTGCTaGAGGAGGTTGATCTTATGC +
Preference number: 4 (lower is better)
Translates to: CICKCTALPISGARTSPSCWICC*RRLILC
Trigger: GCATAAGATCAACCTCCTTCAGCAGCAGATCCAGCA...ACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCACTTTCAAATTTCGGTTaGAGTCCAGCTTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPLSNFG*SPASPG
Trigger: GCCAGGAGAAGCTGGACTTCAACCGAAATTTGAAAG...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCATCTTGTGCAGTGAATaGACAGATGAAACACACACA +
Preference number: 4 (lower is better)
Translates to: QLLRKGGRLSPHECICKCILCSE*TDETHT
Trigger: TGTGTGTGTTTCATCTGTTCATTCACTGCACAAGAT...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTAAACTGATCAGAGGCTaGGATCCAGTCCCTAGTATA +
Preference number: 4 (lower is better)
Translates to: RSRSGIERHTHRNSATVPKLIRG*DPVPSI
Trigger: TATACTAGGGACTGGATCTCAGCCTCTGATCAGTTT...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCACCTCATGAATGTATCTaGAAGTGCACAGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPPHECI*KCTALP
Trigger: GGGCAAAGCTGTGCACTTGCAGATACATTCATGAGG...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCAAAACTGATCAGAGGCTaGGATCCAGTCCCTAGTATA +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPKLIRG*DPVPSI
Trigger: TATACTAGGGACTGGATCTCAGCCTCTGATCAGTTT...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCAGAATGTATCTGCAAGTaGACAGCTTTGCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPECICK*TALPIS
Trigger: AGAGATGGGCAAAGCTGTGCACTTGCAGATACATTC...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp TGTATCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTCCTCATGAATGTATCTaGAAGTGCACAGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: CICKCTALPISGARTSPSPHECI*KCTALP
Trigger: GGGCAAAGCTGTGCACTTGCAGATACATTCATGAGG...ACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR GCA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGACAGCCAGACCCTTTTaGACAAAGTACAAAGCGATC +
Preference number: 4 (lower is better)
Translates to: TKYKAILVIDEQSGGVWETARPF*TKYKAI
Trigger: GATCGCTTTGTACTTTGTGCAAAAGGGTCTGGCTGT...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGCTTTCAAATTTCGGTTaGAGTCCAGCTTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: THTAARGTIGLAEMKTARLSNFG*SPASPG
Trigger: GCCAGGAGAAGCTGGACTTCAACCGAAATTTGAAAG...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR TCA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTATCTTGTGCAGTGAATaGACAGATGAAACACACACA +
Preference number: 4 (lower is better)
Translates to: RSRSGIERHTHRNSATVPILCSE*TDETHT
Trigger: TGTGTGTGTTTCATCTGTTCATTCACTGCACAAGAT...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGCTTCTCTATGGCTaGCACCACTTCTTTCAAATT +
Preference number: 4 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPQLLYG*HHFFQI
Trigger: AATTTGAAAGAAGTGGTGCCAGCCATAGAGAAGCTG...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CCA 90 bp TGTATCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACAACAGCTTCTCTATaGCTGGCACCACTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: CICKCTALPISGARTSPSTTASL*LAPLLS
Trigger: TGAAAGAAGTGGTGCCAGCCATAGAGAAGCTGTTGT...ACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
3UTR CAA 72 bp GCAGAGATGAAAACAGCAAGGGACAGCCAGACCCTTTaGCACAAAGTACAAAGCGATCCTGGTGATAGACGA +
Preference number: 4 (lower is better)
Translates to: AEMKTARDSQTL*HKVQSDPGDRR
Trigger: TCGTCTATCACCAGGATCGCTTTGTACTTTGTGCAAAAGGGTCTGGCTGTCCCTTGCTGTTTTCATCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS GCA 90 bp CTCCGTGCGGTCCTCGCGGCTGGCAGCCTAGGCTTCCCGCTCACATaGCCCCGCGACGCGGCGGGCGGGCCGGGTTGGGGAGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LRAVLAAGSLGFPLT*PRDAAGGPGWGGWA
Trigger: AGCCCAGCCTCCCCAACCCGGCCCGCCCGCCGCGTCGCGGGGGCATGTGAGCGGGAAGCCTAGGCTGCCAGCCGCGAGGACCGCACGGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367203.8
ENST00000367204.6
ENST00000530882.1
ENST00000534185.1
CDS GCA 90 bp GTCCTGCTCTGCGACTCGTCGGACGCGCAGCCGGCCCGCCCTCCCTaGTCTTCGGCTCTCACGCTCTCCGGCTCCAACCTCAGCGCCTCG +
Preference number: 5 (lower is better)
Translates to: VLLCDSSDAQPARPP*SSALTLSGSNLSAS
Trigger: CGAGGCGCTGAGGTTGGAGCCGGAGAGCGTGAGAGCCGAAGAGCAGGGAGGGCGGGCCGGCTGCGCGTCCGACGAGTCGCAGAGCAGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367203.8
ENST00000367204.6
ENST00000530882.1
ENST00000534185.1
CDS TCA 90 bp CCACGCAACCATGGTGGAGGAGCTCTGCGCCTCGTCGCAGGCACCTaGGCCCCACGCAGGACGCGCGCAGGTCGCTTCGGCTTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: PRNHGGGALRLVAGT*APRRTRAGRFGFPL
Trigger: CAGCGGGAAGCCGAAGCGACCTGCGCGCGTCCTGCGTGGGGCTCAGGTGCCTGCGACGAGGCGCAGAGCTCCTCCACCATGGTTGCGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525442.1
CDS-3UTR CAA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGGGGGAGCTGGAGGTGTaGGGCAGCTCGGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRAGELEV*GSSGAL
Trigger: CAAGGCCCCCGAGCTGCCCAACACCTCCAGCTCCCC...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS GCA 90 bp CTCAGACCTGGGCTCGCCGGTTCTGGGCCCGGGTTCCAGGACCCGTaGTCACACAGTTCAGTTCCAAGCCGGGACTGGAGAAGGGCGCTC +
Preference number: 5 (lower is better)
Translates to: LRPGLAGSGPGFQDP*SHSSVPSRDWRRAL
Trigger: GAGCGCCCTTCTCCAGTCCCGGCTTGGAACTGAACTGTGTGAGCACGGGTCCTGGAACCCGGGCCCAGAACCGGCGAGCCCAGGTCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367203.8
ENST00000367204.6
CDS GCA 90 bp CGGGAGCCATCCATGTCGCAGCTCAGCATGGCTTCCTCCAGTGGGTaGACACAGCCGTCCTCCAGCCGCTCCTTGGCTGGGGATGAGTCC +
Preference number: 5 (lower is better)
Translates to: REPSMSQLSMASSSG*TQPSSSRSLAGDES
Trigger: GGACTCATCCCCAGCCAAGGAGCGGCTGGAGGACGGCTGTGTGCACCCACTGGAGGAAGCCATGCTGAGCTGCGACATGGATGGCTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272193.10
ENST00000367204.6
ENST00000525258.1
ENST00000618875.4
CDS CCA 90 bp AGGCTGACCGCTGAGCTCTGGGCTCAGACCTGGGCTCGCCGGTTCTaGGCCCGGGTTCCAGGACCCGTGCTCACACAGTTCAGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: RLTAELWAQTWARRF*ARVPGPVLTQFSSK
Trigger: CTTGGAACTGAACTGTGTGAGCACGGGTCCTGGAACCCGGGCCCAGAACCGGCGAGCCCAGGTCTGAGCCCAGAGCTCAGCGGTCAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367203.8
ENST00000367204.6
ENST00000530882.1
ENST00000534185.1
CDS CCA 90 bp AGTTCACCATGGTGCCAACGCCATCCAGGGCCAGCTGGGCAGAGATaGGGCTCCTCATGGACATCTACTCAGCCAGGCGCCGGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: SSPWCQRHPGPAGQR*GSSWTSTQPGAGLG
Trigger: CCCGAGCCCGGCGCCTGGCTGAGTAGATGTCCATGAGGAGCCCCATCTCTGCCCAGCTGGCCCTGGATGGCGTTGGCACCATGGTGAACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367203.8
ENST00000367204.6
CDS-3UTR CAA 90 bp TGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTCGGGGAGCTGGAGGTGTaGGGCAGCTCGGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: WMALVTASPSPRKPRGRLGELEV*GSSGAL
Trigger: CAAGGCCCCCGAGCTGCCCAACACCTCCAGCTCCCC...GAGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR CAA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGGGGGAGCTGGAGGTGTaGGGCAGCTCGGGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGGELEV*GSSGAL
Trigger: CAAGGCCCCCGAGCTGCCCAACACCTCCAGCTCCCC...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
66% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGTCCTCCAGCCGCTCCTaGGCTGGGGATGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRASSSRS*AGDESR
Trigger: CCTGGACTCATCCCCAGCCAAGGAGCGGCTGGAGGA...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS CCA 90 bp AGCCGGAGCAGAAAACAAACAGGATGCCGCGCTGGTCTGGTCCGCTaGGGAACGACCCTGAAACCGTGGCAAGGGGAGCGCGTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: SRSRKQTGCRAGLVR*GTTLKPWQGERVCP
Trigger: GGGACAGACGCGCTCCCCTTGCCACGGTTTCAGGGTCGTTCCCCAGCGGACCAGACCAGCGCGGCATCCTGTTTGTTTTCTGCTCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525442.1
CDS CCA 90 bp CTCCGACACTCCTGGTCTCTTGGGTTCTGGGGACCCATTACCCTCTaGAGAGCTACAGTCTACTCAGCCAGGCGCCGGGCTCGGGGCTCG +
Preference number: 5 (lower is better)
Translates to: LRHSWSLGFWGPITL*RATVYSARRRARGS
Trigger: CGAGCCCCGAGCCCGGCGCCTGGCTGAGTAGACTGTAGCTCTCCAGAGGGTAATGGGTCCCCAGAACCCAAGAGACCAGGAGTGTCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534185.1
CDS-3UTR CAA 90 bp TGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTCTCGGGGGCCTTGGGCTaGGCTGTGAGGTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: WMALVTASPSPRKPRGRLSGALG*AVRFRG
Trigger: GCCCCTGAACCTCACAGCCAAGCCCAAGGCCCCCGA...GAGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR CAA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGGCAGCTCGGGGGCCTaGGGCTTGGCTGTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGGSSGA*GLAVRF
Trigger: GAACCTCACAGCCAAGCCCAAGGCCCCCGAGCTGCC...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp CTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTGGCAGCTCGGGGGCCTaGGGCTTGGCTGTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: LDGFGDSVPFTKEAQRQAGSSGA*GLAVRF
Trigger: GAACCTCACAGCCAAGCCCAAGGCCCCCGAGCTGCC...AGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS CCA 90 bp AGGCATGTTGGGGTCCAGGCTACGAGGGACATAGTGCTCCACCAGTaGCTGTGCCAGCGGCATGCCTGCTGCCCGAGGGTACAGGACATC +
Preference number: 5 (lower is better)
Translates to: RHVGVQATRDIVLHQ*LCQRHACCPRVQDI
Trigger: GATGTCCTGTACCCTCGGGCAGCAGGCATGCCGCTGGCACAGCCACTGGTGGAGCACTATGTCCCTCGTAGCCTGGACCCCAACATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272193.10
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCTCGGGGGCCTTGGGCTaGGCTGTGAGGTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: QLLRKGGRLSPHECICKCSGALG*AVRFRG
Trigger: GCCCCTGAACCTCACAGCCAAGCCCAAGGCCCCCGA...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGTGCAAGTGCACAGCTTaGCCCATCTCTGGGGCACGA +
Preference number: 5 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKCKCTA*PISGAR
Trigger: TCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCA...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS GCA 90 bp GGACATGTCAGCCCCAGAGCCCCAGGCCTCTTCAATGTCCTCGAGTaGTCAGCGCCACACAGGGTCAGGGTGGACAACCATCCCATCGGA +
Preference number: 5 (lower is better)
Translates to: GHVSPRAPGLFNVLE*SAPHRVRVDNHPIG
Trigger: TCCGATGGGATGGTTGTCCACCCTGACCCTGTGTGGCGCTGAGCACTCGAGGACATTGAAGAGGCCTGGGGCTCTGGGGCTGACATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272193.10
CDS GCA 90 bp GGCTACGAGGGACATAGTGCTCCACCAGTGGCTGTGCCAGCGGCATaGCTGCTGCCCGAGGGTACAGGACATCTGAGGAGCTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: GYEGHSAPPVAVPAA*LLPEGTGHLRSSSA
Trigger: TGCAGATGAGCTCCTCAGATGTCCTGTACCCTCGGGCAGCAGGCATGCCGCTGGCACAGCCACTGGTGGAGCACTATGTCCCTCGTAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272193.10
ENST00000367204.6
ENST00000618875.4
CDS GCA 90 bp GGCTGGCCGCAGTGGTGGAACCTCCCTTCTCACACTCACCTGGTTTaGAGGGAATGGGCTGAATGGGTAAGGCCAGCTGGGAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: GWPQWWNLPSHTHLV*REWAEWVRPAGSQG
Trigger: CCCCTGACTCCCAGCTGGCCTTACCCATTCAGCCCATTCCCTGCAAACCAGGTGAGTGTGAGAAGGGAGGTTCCACCACTGCGGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS CCA 90 bp CTCCAGGGCGCTTTCCCTGACCTCAGGACAGGCTGGCCGCAGTGGTaGAACCTCCCTTCTCACACTCACCTGGTTTGCAGGGAATGGGCT +
Preference number: 5 (lower is better)
Translates to: LQGAFPDLRTGWPQW*NLPSHTHLVCREWA
Trigger: AGCCCATTCCCTGCAAACCAGGTGAGTGTGAGAAGGGAGGTTCCACCACTGCGGCCAGCCTGTCCTGAGGTCAGGGAAAGCGCCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS CCA 90 bp TGGCTCCAGGGCGCTTTCCCTGACCTCAGGACAGGCTGGCCGCAGTaGTGGAACCTCCCTTCTCACACTCACCTGGTTTGCAGGGAATGG +
Preference number: 5 (lower is better)
Translates to: WLQGAFPDLRTGWPQ*WNLPSHTHLVCREW
Trigger: CCATTCCCTGCAAACCAGGTGAGTGTGAGAAGGGAGGTTCCACCACTGCGGCCAGCCTGTCCTGAGGTCAGGGAAAGCGCCCTGGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS-3UTR CAA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGAGTGTGGGAGGGGTGTaGGTCCCACAGTGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGSVGGV*VPQWLV
Trigger: GACCAGCCACTGTGGGACCAACACCCCTCCCACACT...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS CCA 90 bp GCCTCTTCAATGTCCTCGAGTGCTCAGCGCCACACAGGGTCAGGGTaGACAACCATCCCATCGGAGGGATCCAGTGGGACACACTCAGGC +
Preference number: 5 (lower is better)
Translates to: ASSMSSSAQRHTGSG*TTIPSEGSSGTHSG
Trigger: GCCTGAGTGTGTCCCACTGGATCCCTCCGATGGGATGGTTGTCCACCCTGACCCTGTGTGGCGCTGAGCACTCGAGGACATTGAAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272193.10
CDS CCA 90 bp TTGATGGTGCAGTTCACCATGGTGCCAACGCCATCCAGGGCCAGCTaGGCAGAGATGGGGCTCCTCATGGACATCTACTCAGCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: LMVQFTMVPTPSRAS*AEMGLLMDIYSARR
Trigger: GCGCCTGGCTGAGTAGATGTCCATGAGGAGCCCCATCTCTGCCCAGCTGGCCCTGGATGGCGTTGGCACCATGGTGAACTGCACCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367203.8
ENST00000367204.6
CDS CCA 90 bp GCTTCTCCTGGCTTCCAGAGGCAGCCTCCGACACTCCTGGTCTCTTaGGTTCTGGGGACCCATTACCCTCTGGAGAGCTACAGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: ASPGFQRQPPTLLVS*VLGTHYPLESYSPR
Trigger: CCTGGGACTGTAGCTCTCCAGAGGGTAATGGGTCCCCAGAACCCAAGAGACCAGGAGTGTCGGAGGCTGCCTCTGGAAGCCAGGAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367203.8
ENST00000367204.6
ENST00000528591.5
ENST00000618875.4
CDS-3UTR CAA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGCCCACGCGCAGCCGCTaGCCCTCCACGATGCAGGTG +
Preference number: 5 (lower is better)
Translates to: TKYKAILVIDEQSGGVWEPTRSR*PSTMQV
Trigger: CACCTGCATCGTGGAGGGCAAGCGGCTGCGCGTGGG...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCACCCACGCGCAGCCGCTaGCCCTCCACGATGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPPTRSR*PSTMQV
Trigger: CACCTGCATCGTGGAGGGCAAGCGGCTGCGCGTGGG...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCGTCCTCATCAGGGCCTaGTACTCTCCCACGCGCAGC +
Preference number: 5 (lower is better)
Translates to: QLLRKGGRLSPHECICKCVLIRA*YSPTRS
Trigger: GCTGCGCGTGGGAGAGTACAAGGCCCTGATGAGGAC...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGACGATCACAGGCATGTaGGGGTCCAGGCTACGAGGG +
Preference number: 5 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGTITGM*GSRLRG
Trigger: CCCTCGTAGCCTGGACCCCAACATGCCTGTGATCGT...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGGCTGTGCCCATCGAGTaGGGACAAGGTCTTCCCCAG +
Preference number: 5 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGAVPIE*GQGLPQ
Trigger: CTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGC...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp CAGCTCCTCAGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCCCAGGACAAAGCCCCTaGGAGGCCGAGGCACATTCC +
Preference number: 5 (lower is better)
Translates to: QLLRKGGRLSPHECICKCPGQSP*EAEAHS
Trigger: GGAATGTGCCTCGGCCTCCAAGGGGCTTTGTCCTGG...GCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCTGAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCACCTCGTGGGATCAGGTaGGGACCAGGGGCGGGGGCA +
Preference number: 5 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPPRGIR*GPGAGA
Trigger: TGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGG...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGCCTCGTGGGATCAGGTaGGGACCAGGGGCGGGGGCA +
Preference number: 5 (lower is better)
Translates to: TKYKAILVIDEQSGGVWEPRGIR*GPGAGA
Trigger: TGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGG...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCATCGGGGGCCTTGGGCTaGGCTGTGAGGTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPSGALG*AVRFRG
Trigger: GCCCCTGAACCTCACAGCCAAGCCCAAGGCCCCCGA...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp CTGGATGGCTTTGGTGACAGCGTCCCCTTCACCAAGGAAGCCCAGAGGCAGGCTGCATCCTGGATGGCTTaGGTGACAGCGTCCCCTTCA +
Preference number: 5 (lower is better)
Translates to: LDGFGDSVPFTKEAQRQAASWMA*VTASPS
Trigger: TGAAGGGGACGCTGTCACCAAAGCCATCCAGGATGC...AGCCTGCCTCTGGGCTTCCTTGGTGAAGGGGACGCTGTCACCAAAGCCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480326.1
CDS-3UTR CAA 90 bp TTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGGCATCCTGGATGGCTTaGGTGACAGCGTCCCCTTCA +
Preference number: 5 (lower is better)
Translates to: LAGCAHRVGTRSSPEEKGASWMA*VTASPS
Trigger: TGAAGGGGACGCTGTCACCAAAGCCATCCAGGATGC...CCCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGGCGTTCATGGGCCTCTaGATGTGGCTGCTGTTTCGG +
Preference number: 5 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGAFMGL*MWLLFR
Trigger: CCGAAACAGCAGCCACATCAAGAGGCCCATGAACGC...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTCCCCTGGGCTGGAGCTaGGGGGTCAGCACTATCCTG +
Preference number: 5 (lower is better)
Translates to: RSRSGIERHTHRNSATVPPLGWS*GVSTIL
Trigger: CAGGATAGTGCTGACCCCCAAGCTCCAGCCCAGGGG...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp CATGGCCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGATGCAAGTGCACAGCTTaGCCCATCTCTGGGGCACGA +
Preference number: 5 (lower is better)
Translates to: HGHTAVPAHPGQQLLRKGCKCTA*PISGAR
Trigger: TCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCA...TCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS CCA 90 bp GAAGTCCAGCTTCTCCTGGCTTCCAGAGGCAGCCTCCGACACTCCTaGTCTCTTGGGTTCTGGGGACCCATTACCCTCTGGAGAGCTACA +
Preference number: 5 (lower is better)
Translates to: EVQLLLASRGSLRHS*SLGFWGPITLWRAT
Trigger: TGTAGCTCTCCAGAGGGTAATGGGTCCCCAGAACCCAAGAGACCAGGAGTGTCGGAGGCTGCCTCTGGAAGCCAGGAGAAGCTGGACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367203.8
ENST00000367204.6
ENST00000528591.5
ENST00000534185.1
ENST00000618875.4
CDS CCA 90 bp TTGATGGTGCAGTTCACCATGGTGCCAACGCCATCCAGGGCCAGCTaGGCAGAGATGGGGCTCCTCATGGACATCCTACGATATCCCAGG +
Preference number: 5 (lower is better)
Translates to: LMVQFTMVPTPSRAS*AEMGLLMDILRYPR
Trigger: CCTGGGATATCGTAGGATGTCCATGAGGAGCCCCATCTCTGCCCAGCTGGCCCTGGATGGCGTTGGCACCATGGTGAACTGCACCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525442.1
CDS CCA 90 bp GCTTCTCCTGGCTTCCAGAGGCAGCCTCCGACACTCCTGGTCTCTTaGGTTCTGGGGACCCATTACCCTCTGGAGAGCTACAGTCTACTC +
Preference number: 5 (lower is better)
Translates to: ASPGFQRQPPTLLVS*VLGTHYPLESYSLL
Trigger: GAGTAGACTGTAGCTCTCCAGAGGGTAATGGGTCCCCAGAACCCAAGAGACCAGGAGTGTCGGAGGCTGCCTCTGGAAGCCAGGAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534185.1
CDS-3UTR CAA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCATCCTCCAGCCGCTCCTaGGCTGGGGATGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPSSSRS*AGDESR
Trigger: CCTGGACTCATCCCCAGCCAAGGAGCGGCTGGAGGA...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTGTCCTCATCAGGGCCTaGTACTCTCCCACGCGCAGC +
Preference number: 5 (lower is better)
Translates to: RSRSGIERHTHRNSATVPVLIRA*YSPTRS
Trigger: GCTGCGCGTGGGAGAGTACAAGGCCCTGATGAGGAC...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGAGTGTGGGAGGGGTGTaGGTCCCACAGTGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: RKGGRLSPHECICKCTALSVGGV*VPQWLV
Trigger: GACCAGCCACTGTGGGACCAACACCCCTCCCACACT...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS TCA 90 bp GGCCTGAGGGAGCCCGTTTACCCCTTTCACCACCTGAGGACACAGTaGGAGACGCCATCTGTGAACCAGAAAGTCAGCCCTCACCAGACA +
Preference number: 5 (lower is better)
Translates to: GLREPVYPFHHLRTQ*ETPSVNQKVSPHQT
Trigger: TGTCTGGTGAGGGCTGACTTTCTGGTTCACAGATGGCGTCTCTCACTGTGTCCTCAGGTGGTGAAAGGGGTAAACGGGCTCCCTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS CCA 90 bp TTGATGGTGCAGTTCACCATGGTGCCAACGCCATCCAGGGCCAGCTaGGCAGAGATGGGGCTCCTCATGGACATCCATTCATGGAGCACT +
Preference number: 5 (lower is better)
Translates to: LMVQFTMVPTPSRAS*AEMGLLMDIHSWST
Trigger: AGTGCTCCATGAATGGATGTCCATGAGGAGCCCCATCTCTGCCCAGCTGGCCCTGGATGGCGTTGGCACCATGGTGAACTGCACCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528591.5
CDS-3UTR CAA 90 bp CATGGCCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGACGAGATCCAAGGATCTaGCTGATGCTGGAGTTGTGC +
Preference number: 5 (lower is better)
Translates to: HGHTAVPAHPGQQLLRKGRDPRI*LMLELC
Trigger: GCACAACTCCAGCATCAGCAAGATCCTTGGATCTCG...TCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGTTCTTCTCCTCTGACTaGATGGTGCAGTTCACCATG +
Preference number: 5 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRAFFSSD*MVQFTM
Trigger: CATGGTGAACTGCACCATCAAGTCAGAGGAGAAGAA...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp CCAACTCCCTCGTGGGATCAGGTTGGGACCAGGGGCGGGGGCACCAGGACAAAGTCTTTCAAATTTCGGTaGAAGTCCAGCTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PTPSWDQVGTRGGGTRTKSFKFR*KSSFSW
Trigger: CCAGGAGAAGCTGGACTTCAACCGAAATTTGAAAGA...CTTTGTCCTGGTGCCCCCGCCCCTGGTCCCAACCTGATCCCACGAGGGAGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp GTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCAGAGGAGAAGGGCAACATAGTCTTAGGTaGGCTGGCTGTGCCCATCGA +
Preference number: 5 (lower is better)
Translates to: VGWLCPSSWDKVFPRGEGQHSLR*AGCAHR
Trigger: TCGATGGGCACAGCCAGCCAACCTAAGACTATGTTG...CCCTTCTCCTCTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCCAGGACAAAGCCCCTaGGAGGCCGAGGCACATTCC +
Preference number: 5 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPPGQSP*EAEAHS
Trigger: GGAATGTGCCTCGGCCTCCAAGGGGCTTTGTCCTGG...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS TCA 90 bp CTCCCTCCCCAACTGCCCTGTACCGTCAGGTCCCACACCCTTGTCTaGCACATGGCCATTCTGCTGAATTTCAGTGATGGGGTAGAAGGC +
Preference number: 5 (lower is better)
Translates to: LPPQLPCTVRSHTLV*HMAILLNFSDGVEG
Trigger: GCCTTCTACCCCATCACTGAAATTCAGCAGAATGGCCATGTGTCAGACAAGGGTGTGGGACCTGACGGTACAGGGCAGTTGGGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS-3UTR CAA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTGCGTTCATGGGCCTCTaGATGTGGCTGCTGTTTCGG +
Preference number: 5 (lower is better)
Translates to: RSRSGIERHTHRNSATVPAFMGL*MWLLFR
Trigger: CCGAAACAGCAGCCACATCAAGAGGCCCATGAACGC...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGCCCCTGGGCTGGAGCTaGGGGGTCAGCACTATCCTG +
Preference number: 5 (lower is better)
Translates to: THTAARGTIGLAEMKTARPLGWS*GVSTIL
Trigger: CAGGATAGTGCTGACCCCCAAGCTCCAGCCCAGGGG...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp CCATACTGCAGTTCCTGCCCACCCAGGCCAACAGCTCCTCAGGAAGGGAGGGCGTCTTTCAAATTTCGGTaGAAGTCCAGCTTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PYCSSCPPRPTAPQEGRASFKFR*KSSFSW
Trigger: CCAGGAGAAGCTGGACTTCAACCGAAATTTGAAAGA...CGCCCTCCCTTCCTGAGGAGCTGTTGGCCTGGGTGGGCAGGAACTGCAGTATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCAGCTGTGCCCATCGAGTaGGGACAAGGTCTTCCCCAG +
Preference number: 5 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPAVPIE*GQGLPQ
Trigger: CTGGGGAAGACCTTGTCCCAACTCGATGGGCACAGC...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGGCATCCTGGATGGCTTaGGTGACAGCGTCCCCTTCA +
Preference number: 5 (lower is better)
Translates to: TKYKAILVIDEQSGGVWEASWMA*VTASPS
Trigger: TGAAGGGGACGCTGTCACCAAAGCCATCCAGGATGC...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS CCA 90 bp GCTGGCACCACTTCTTTCAAATTTCGGTTGAAGTCCAGCTTCTCCTaGCTTCCAGAGGCAGCCTCCGACACTCCTGGTCTCTTGGGTTCT +
Preference number: 5 (lower is better)
Translates to: AGTTSFKFRLKSSFS*LPEAASDTPGLLGS
Trigger: AGAACCCAAGAGACCAGGAGTGTCGGAGGCTGCCTCTGGAAGCCAGGAGAAGCTGGACTTCAACCGAAATTTGAAAGAAGTGGTGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367203.8
ENST00000367204.6
ENST00000528591.5
ENST00000534185.1
ENST00000618875.4
CDS-3UTR CAA 90 bp AGAAGCAGGAGTGGCATCGAGAGACACACCCACAGGAACTCAGCAACAGTGCCTTTGCTGATGCTGGAGTaGTGCATGTCTGGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: RSRSGIERHTHRNSATVPLLMLE*CMSGKA
Trigger: AGCCTTCCCAGACATGCACAACTCCAGCATCAGCAA...AGGCACTGTTGCTGAGTTCCTGTGGGTGTGTCTCTCGATGCCACTCCTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGACGATCACAGGCATGTaGGGGTCCAGGCTACGAGGG +
Preference number: 5 (lower is better)
Translates to: THTAARGTIGLAEMKTARTITGM*GSRLRG
Trigger: CCCTCGTAGCCTGGACCCCAACATGCCTGTGATCGT...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCTGAGGCTGCAGGTGTaGACGATCACAGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPLRLQV*TITGML
Trigger: CAACATGCCTGTGATCGTCAACACCTGCAGCCTCAG...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCTTGCTGATGCTGGAGTaGTGCATGTCTGGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPLLMLE*CMSGKA
Trigger: AGCCTTCCCAGACATGCACAACTCCAGCATCAGCAA...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp AACATAGTCTTAGGTTGGCTGGCTGTGCCCATCGAGTTGGGACAAGGTCTTCCCCGAGATCCAAGGATCTaGCTGATGCTGGAGTTGTGC +
Preference number: 5 (lower is better)
Translates to: NIVLGWLAVPIELGQGLPRDPRI*LMLELC
Trigger: GCACAACTCCAGCATCAGCAAGATCCTTGGATCTCG...GGGAAGACCTTGTCCCAACTCGATGGGCACAGCCAGCCAACCTAAGACTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp TGTATCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTCTGAGGCTGCAGGTGTaGACGATCACAGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: CICKCTALPISGARTSPSLRLQV*TITGML
Trigger: CAACATGCCTGTGATCGTCAACACCTGCAGCCTCAG...ACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp AGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGGACAGCCACAACATAGTCTTAGGTaGGCTGGCTGTGCCCATCGA +
Preference number: 5 (lower is better)
Translates to: SSQRHNRLGRDENSKGQPQHSLR*AGCAHR
Trigger: TCGATGGGCACAGCCAGCCAACCTAAGACTATGTTG...TGGCTGTCCCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS CCA 90 bp GTTTATGAGCCACACGGTCCATGGTGTCTTTCTACAGCCCCTGAATaGATGAAGATGGGGCCTGGCTTTCTCAGTCCTTTGTGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: VYEPHGPWCLSTAPE*MKMGPGFLSPLCFP
Trigger: GGGGAAACACAAAGGACTGAGAAAGCCAGGCCCCATCTTCATCCATTCAGGGGCTGTAGAAAGACACCATGGACCGTGTGGCTCATAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS-3UTR CAA 90 bp AGGAAGGGAGGGCGCCTCTCCCCTCATGAATGTATCTGCAAGTGCACAGCTTTGTTCTTCTCCTCTGACTaGATGGTGCAGTTCACCATG +
Preference number: 5 (lower is better)
Translates to: RKGGRLSPHECICKCTALFFSSD*MVQFTM
Trigger: CATGGTGAACTGCACCATCAAGTCAGAGGAGAAGAA...CAAAGCTGTGCACTTGCAGATACATTCATGAGGGGAGAGGCGCCCTCCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp TCTGCAAGTGCACAGCTTTGCCCATCTCTGGGGCACGAACAAGTCCAAGTACCACTCTCTTGGGTCCCTTaGACATCTTTGGCTTCCATA +
Preference number: 5 (lower is better)
Translates to: SASAQLCPSLGHEQVQVPLSWVP*TSLASI
Trigger: TATGGAAGCCAAAGATGTCAAAGGGACCCAAGAGAG...TGGTACTTGGACTTGTTCGTGCCCCAGAGATGGGCAAAGCTGTGCACTTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS-3UTR CAA 90 bp ACAAAGTACAAAGCGATCCTGGTGATAGACGAGCAGTCTGGGGGAGTGTGGGAGGACAGCCAGACCCTTTaGCACAAAGTACAAAGCGAT +
Preference number: 5 (lower is better)
Translates to: TKYKAILVIDEQSGGVWEDSQTL*HKVQSD
Trigger: ATCGCTTTGTACTTTGTGCAAAAGGGTCTGGCTGTC...CTCCCACACTCCCCCAGACTGCTCGTCTATCACCAGGATCGCTTTGTACTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS TCA 90 bp ACTAGAAATGACAACAGTACCCCCTGGAACTATGTGACTCTGGCCTaGATCCCTGATGCTTGGAATGCCCAGACAGATATGATGAGGGAG +
Preference number: 5 (lower is better)
Translates to: TRNDNSTPWNYVTLA*IPDAWNAQTDMMRE
Trigger: CTCCCTCATCATATCTGTCTGGGCATTCCAAGCATCAGGGATTCAGGCCAGAGTCACATAGTTCCAGGGGGTACTGTTGTCATTTCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525258.1
CDS-3UTR CAA 90 bp ACACATACAGCAGCCAGAGGCACAATAGGCTTGGCAGAGATGAAAACAGCAAGGCTCTCTTGGGTCCCTTaGACATCTTTGGCTTCCATA +
Preference number: 5 (lower is better)
Translates to: THTAARGTIGLAEMKTARLSWVP*TSLASI
Trigger: TATGGAAGCCAAAGATGTCAAAGGGACCCAAGAGAG...CCTTGCTGTTTTCATCTCTGCCAAGCCTATTGTGCCTCTGGCTGCTGTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367204.6
ENST00000618875.4
CDS GCA 90 bp TCCTGTTCTTCCACAGGGCGGCTGCATTGCATGTCCTCAGGGATATaGCACTTACACTGGCTAGTTATTGTGCATGTCAATAGACTAGAA +
Preference number: 5 (lower is better)
Translates to: SCSSTGRLHCMSSGI*HLHWLVIVHVNRLE
Trigger: TTCTAGTCTATTGACATGCACAATAACTAGCCAGTGTAAGTGGCATATCCCTGAGGACATGCAATGCAGCCGCCCTGTGGAAGAACAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525258.1
CDS TCA 90 bp CATGTCAATAGACTAGAAATGACAACAGTACCCCCTGGAACTATGTaGCTCTGGCCTGAATCCCTGATGCTTGGAATGCCCAGACAGATA +
Preference number: 5 (lower is better)
Translates to: HVNRLEMTTVPPGTM*LWPESLMLGMPRQI
Trigger: TATCTGTCTGGGCATTCCAAGCATCAGGGATTCAGGCCAGAGTCACATAGTTCCAGGGGGTACTGTTGTCATTTCTAGTCTATTGACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525258.1
CDS TCA 90 bp AACCAGAAAGTCAGCCCTCACCAGACACCAAATATGCTGGCTTTATaGTCTTGGAATTCACAGCCCCCAGAACTGTATGTGAGGAATAAC +
Preference number: 5 (lower is better)
Translates to: NQKVSPHQTPNMLAL*SWNSQPPELYVRNN
Trigger: GTTATTCCTCACATACAGTTCTGGGGGCTGTGAATTCCAAGATCATAAAGCCAGCATATTTGGTGTCTGGTGAGGGCTGACTTTCTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS CCA 90 bp ACAGGGCGGCTGCATTGCATGTCCTCAGGGATATGCCACTTACACTaGCTAGTTATTGTGCATGTCAATAGACTAGAAATGACAACAGTA +
Preference number: 5 (lower is better)
Translates to: TGRLHCMSSGICHLH*LVIVHVNRLEMTTV
Trigger: TACTGTTGTCATTTCTAGTCTATTGACATGCACAATAACTAGCCAGTGTAAGTGGCATATCCCTGAGGACATGCAATGCAGCCGCCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525258.1
CDS TCA 90 bp GATTCAGAAAAAGAGGATGATTCTTCTACCAGACAGATCCAAAACTaGGGCCCAGAAAGTCCACATAGCAAATTAATGGATGAGAGTGGC +
Preference number: 5 (lower is better)
Translates to: DSEKEDDSSTRQIQN*GPESPHSKLMDESG
Trigger: GCCACTCTCATCCATTAATTTGCTATGTGGACTTTCTGGGCCTCAGTTTTGGATCTGTCTGGTAGAAGAATCATCCTCTTTTTCTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS GCA 90 bp TCTGACACAGTAAATGTACTAGAGTTGGAGAGACTAGACCTGGATTaGTACATCATTTTACATCTGGAAAGGGCTTTATGGTTTTTCATT +
Preference number: 5 (lower is better)
Translates to: SDTVNVLELERLDLD*YIILHLERALWFFI
Trigger: AATGAAAAACCATAAAGCCCTTTCCAGATGTAAAATGATGTAGCAATCCAGGTCTAGTCTCTCCAACTCTAGTACATTTACTGTGTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS GCA 72 bp GTCCTCGCGGCTGGCAGCCTAGGCTTCCCGCTCACATaGCCCCGCGACGCGGCGGGCGGGCCGGGTTGGGGA +
Preference number: 6 (lower is better)
Translates to: VLAAGSLGFPLT*PRDAAGGPGWG
Trigger: TCCCCAACCCGGCCCGCCCGCCGCGTCGCGGGGGCATGTGAGCGGGAAGCCTAGGCTGCCAGCCGCGAGGAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367203.8
ENST00000367204.6
ENST00000530882.1
ENST00000534185.1
CDS GCA 72 bp CGGGGCTCGCGGCTCCGCGCTCCTGCTCCTCCTCCGTaGGGTCCTCGCGGCTGGCAGCCTAGGCTTCCCGCT +
Preference number: 6 (lower is better)
Translates to: RGSRLRAPAPPP*GPRGWQPRLPA
Trigger: AGCGGGAAGCCTAGGCTGCCAGCCGCGAGGACCGCACGGAGGAGGAGCAGGAGCGCGGAGCCGCGAGCCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367203.8
ENST00000367204.6
ENST00000530882.1
ENST00000534185.1
CDS TCA 72 bp CATGGTGGAGGAGCTCTGCGCCTCGTCGCAGGCACCTaGGCCCCACGCAGGACGCGCGCAGGTCGCTTCGGC +
Preference number: 6 (lower is better)
Translates to: HGGGALRLVAGT*APRRTRAGRFG
Trigger: GCCGAAGCGACCTGCGCGCGTCCTGCGTGGGGCTCAGGTGCCTGCGACGAGGCGCAGAGCTCCTCCACCATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525442.1
CDS GCA 72 bp TGCGACTCGTCGGACGCGCAGCCGGCCCGCCCTCCCTaGTCTTCGGCTCTCACGCTCTCCGGCTCCAACCTC +
Preference number: 6 (lower is better)
Translates to: CDSSDAQPARPP*SSALTLSGSNL
Trigger: GAGGTTGGAGCCGGAGAGCGTGAGAGCCGAAGAGCAGGGAGGGCGGGCCGGCTGCGCGTCCGACGAGTCGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367203.8
ENST00000367204.6
ENST00000530882.1
ENST00000534185.1
CDS CCA 72 bp TCCGAGTCAGGGCCTACGAGGCTGACCGCTGAGCTCTaGGCTCAGACCTGGGCTCGCCGGTTCTGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: SESGPTRLTAEL*AQTWARRFWAR
Trigger: CCGGGCCCAGAACCGGCGAGCCCAGGTCTGAGCCCAGAGCTCAGCGGTCAGCCTCGTAGGCCCTGACTCGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367203.8
ENST00000367204.6
ENST00000530882.1
ENST00000534185.1
CDS CCA 72 bp AGCGCGTCTGTCCCCCAGCACCCCACGCAACCATGGTaGAGGAGCTCTGCGCCTCGTCGCAGGCACCTGAGC +
Preference number: 6 (lower is better)
Translates to: SASVPQHPTQPW*RSSAPRRRHLS
Trigger: GCTCAGGTGCCTGCGACGAGGCGCAGAGCTCCTCCACCATGGTTGCGTGGGGTGCTGGGGGACAGACGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525442.1
CDS TCA 72 bp CAGCGGCATGCCTGCTGCCCGAGGGTACAGGACATCTaGGGAGCTCATCTGCACCTGGCCAGCCTGCGGGGG +
Preference number: 6 (lower is better)
Translates to: QRHACCPRVQDI*GAHLHLASLRG
Trigger: CCCCCGCAGGCTGGCCAGGTGCAGATGAGCTCCTCAGATGTCCTGTACCCTCGGGCAGCAGGCATGCCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272193.10
ENST00000367204.6
ENST00000618875.4
CDS CCA 72 bp GACCCGTGCTCACACAGTTCAGTTCCAAGCCGGGACTaGAGAAGGGCGCTCGCGGCTCGCTGCTGCGAGGCG +
Preference number: 6 (lower is better)
Translates to: DPCSHSSVPSRD*RRALAARCCEA
Trigger: CGCCTCGCAGCAGCGAGCCGCGAGCGCCCTTCTCCAGTCCCGGCTTGGAACTGAACTGTGTGAGCACGGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367203.8
ENST00000367204.6
CDS CCA 72 bp GCTGAGCTCTGGGCTCAGACCTGGGCTCGCCGGTTCTaGGCCCGGGTTCCAGGACCCGTGCTCACACAGTTC +
Preference number: 6 (lower is better)
Translates to: AELWAQTWARRF*ARVPGPVLTQF
Trigger: GAACTGTGTGAGCACGGGTCCTGGAACCCGGGCCCAGAACCGGCGAGCCCAGGTCTGAGCCCAGAGCTCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367203.8
ENST00000367204.6
ENST00000530882.1
ENST00000534185.1
CDS GCA 72 bp GGGCTCGCCGGTTCTGGGCCCGGGTTCCAGGACCCGTaGTCACACAGTTCAGTTCCAAGCCGGGACTGGAGA +
Preference number: 6 (lower is better)
Translates to: GLAGSGPGFQDP*SHSSVPSRDWR
Trigger: TCTCCAGTCCCGGCTTGGAACTGAACTGTGTGAGCACGGGTCCTGGAACCCGGGCCCAGAACCGGCGAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367203.8
ENST00000367204.6
CDS CCA 72 bp GGGGTCCAGGCTACGAGGGACATAGTGCTCCACCAGTaGCTGTGCCAGCGGCATGCCTGCTGCCCGAGGGTA +
Preference number: 6 (lower is better)
Translates to: GVQATRDIVLHQ*LCQRHACCPRV
Trigger: TACCCTCGGGCAGCAGGCATGCCGCTGGCACAGCCACTGGTGGAGCACTATGTCCCTCGTAGCCTGGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272193.10
ENST00000367204.6
ENST00000618875.4
CDS GCA 72 bp CAGGCTACGAGGGACATAGTGCTCCACCAGTGGCTGTaGCAGCGGCATGCCTGCTGCCCGAGGGTACAGGAC +
Preference number: 6 (lower is better)
Translates to: QATRDIVLHQWL*QRHACCPRVQD
Trigger: GTCCTGTACCCTCGGGCAGCAGGCATGCCGCTGGCACAGCCACTGGTGGAGCACTATGTCCCTCGTAGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272193.10
ENST00000367204.6
ENST00000618875.4
CDS CCA 72 bp GCCATCCATGTCGCAGCTCAGCATGGCTTCCTCCAGTaGGTGCACACAGCCGTCCTCCAGCCGCTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: AIHVAAQHGFLQ*VHTAVLQPLLG
Trigger: GCCAAGGAGCGGCTGGAGGACGGCTGTGTGCACCCACTGGAGGAAGCCATGCTGAGCTGCGACATGGATGGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272193.10
ENST00000367204.6
ENST00000525258.1
ENST00000618875.4
CDS CCA 72 bp ACCAGAAGCTGGAGCTCCTTCTCTGCTAGGCTCTCTTaGGTCCCTGTACTCAGCCAGGCGCCGGGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: TRSWSSFSARLS*VPVLSQAPGSG
Trigger: CCCCGAGCCCGGCGCCTGGCTGAGTACAGGGACCCAAGAGAGCCTAGCAGAGAAGGAGCTCCAGCTTCTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530882.1
CDS GCA 72 bp GGACATAGTGCTCCACCAGTGGCTGTGCCAGCGGCATaGCTGCTGCCCGAGGGTACAGGACATCTGAGGAGC +
Preference number: 6 (lower is better)
Translates to: GHSAPPVAVPAA*LLPEGTGHLRS
Trigger: GCTCCTCAGATGTCCTGTACCCTCGGGCAGCAGGCATGCCGCTGGCACAGCCACTGGTGGAGCACTATGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272193.10
ENST00000367204.6
ENST00000618875.4
CDS GCA 72 bp GCGCATAGTCGGGCTGATGAGAAAGACCTAGTCCTCTaGGGTCGGCGAGGAGCGGGTTGGGGGTGCACCCTA +
Preference number: 6 (lower is better)
Translates to: AHSRADEKDLVL*GRRGAGWGCTL
Trigger: TAGGGTGCACCCCCAACCCGCTCCTCGCCGACCGCAGAGGACTAGGTCTTTCTCATCAGCCCGACTATGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525442.1
CDS CCA 72 bp GGCGCTTTCCCTGACCTCAGGACAGGCTGGCCGCAGTaGTGGAACCTCCCTTCTCACACTCACCTGGTTTGC +
Preference number: 6 (lower is better)
Translates to: GAFPDLRTGWPQ*WNLPSHTHLVC
Trigger: GCAAACCAGGTGAGTGTGAGAAGGGAGGTTCCACCACTGCGGCCAGCCTGTCCTGAGGTCAGGGAAAGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS CCA 72 bp AGAAAACAAACAGGATGCCGCGCTGGTCTGGTCCGCTaGGGAACGACCCTGAAACCGTGGCAAGGGGAGCGC +
Preference number: 6 (lower is better)
Translates to: RKQTGCRAGLVR*GTTLKPWQGER
Trigger: GCGCTCCCCTTGCCACGGTTTCAGGGTCGTTCCCCAGCGGACCAGACCAGCGCGGCATCCTGTTTGTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525442.1
CDS CCA 72 bp ATGTCCTCGAGTGCTCAGCGCCACACAGGGTCAGGGTaGACAACCATCCCATCGGAGGGATCCAGTGGGACA +
Preference number: 6 (lower is better)
Translates to: MSSSAQRHTGSG*TTIPSEGSSGT
Trigger: TGTCCCACTGGATCCCTCCGATGGGATGGTTGTCCACCCTGACCCTGTGTGGCGCTGAGCACTCGAGGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272193.10
CDS CCA 72 bp CTTCTCCTGGCTTCCAGAGGCAGCCTCCGACACTCCTaGTCTCTTGGGTTCTGGGGACCCATTACCCTCTGG +
Preference number: 6 (lower is better)
Translates to: LLLASRGSLRHS*SLGFWGPITLW
Trigger: CCAGAGGGTAATGGGTCCCCAGAACCCAAGAGACCAGGAGTGTCGGAGGCTGCCTCTGGAAGCCAGGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367203.8
ENST00000367204.6
ENST00000528591.5
ENST00000534185.1
ENST00000618875.4
CDS CCA 72 bp GCTTTCCCTGACCTCAGGACAGGCTGGCCGCAGTGGTaGAACCTCCCTTCTCACACTCACCTGGTTTGCAGG +
Preference number: 6 (lower is better)
Translates to: AFPDLRTGWPQW*NLPSHTHLVCR
Trigger: CCTGCAAACCAGGTGAGTGTGAGAAGGGAGGTTCCACCACTGCGGCCAGCCTGTCCTGAGGTCAGGGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS GCA 72 bp TGCTGCTTCTCAAACAGCATGGCAGCCATGTTCTTCTaGTCCGAGTGGGCTGTCAGGAGCTGGTCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: CCFSNSMAAMFF*SEWAVRSWSRR
Trigger: CCTGCGGGACCAGCTCCTGACAGCCCACTCGGAGCAGAAGAACATGGCTGCCATGCTGTTTGAGAAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272193.10
ENST00000367203.8
ENST00000367204.6
ENST00000480326.1
ENST00000530882.1
ENST00000618875.4
CDS GCA 72 bp GCAATCTGCTCCTGCTGCTGCCGGGCAAGCTCCATCTaGTGCTGCTGCTTCTCAAACAGCATGGCAGCCATG +
Preference number: 6 (lower is better)
Translates to: AICSCCCRASSI*CCCFSNSMAAM
Trigger: CATGGCTGCCATGCTGTTTGAGAAGCAGCAGCAGCAGATGGAGCTTGCCCGGCAGCAGCAGGAGCAGATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272193.10
ENST00000367203.8
ENST00000367204.6
ENST00000480326.1
ENST00000530882.1
ENST00000618875.4
CDS GCA 72 bp TCCTGCTGCTGCCGGGCAAGCTCCATCTGCTGCTGCTaGTTCTCAAACAGCATGGCAGCCATGTTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SCCCRASSICCC*FSNSMAAMFFC
Trigger: GCAGAAGAACATGGCTGCCATGCTGTTTGAGAAGCAGCAGCAGCAGATGGAGCTTGCCCGGCAGCAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272193.10
ENST00000367203.8
ENST00000367204.6
ENST00000480326.1
ENST00000530882.1
ENST00000618875.4
CDS GCA 72 bp TGCTCCTGCTGCTGCCGGGCAAGCTCCATCTGCTGCTaGTGCTTCTCAAACAGCATGGCAGCCATGTTCTTC +
Preference number: 6 (lower is better)
Translates to: CSCCCRASSICC*CFSNSMAAMFF
Trigger: GAAGAACATGGCTGCCATGCTGTTTGAGAAGCAGCAGCAGCAGATGGAGCTTGCCCGGCAGCAGCAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272193.10
ENST00000367203.8
ENST00000367204.6
ENST00000480326.1
ENST00000530882.1
ENST00000618875.4
CDS GCA 72 bp ATCTGCTCCTGCTGCTGCCGGGCAAGCTCCATCTGCTaGTGCTGCTTCTCAAACAGCATGGCAGCCATGTTC +
Preference number: 6 (lower is better)
Translates to: ICSCCCRASSIC*CCFSNSMAAMF
Trigger: GAACATGGCTGCCATGCTGTTTGAGAAGCAGCAGCAGCAGATGGAGCTTGCCCGGCAGCAGCAGGAGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000272193.10
ENST00000367203.8
ENST00000367204.6
ENST00000480326.1
ENST00000530882.1
ENST00000618875.4
CDS GCA 72 bp CTTATGCTGCTGCTGAATCAGCTGCTGCTGCTGCTTTaGAATCTGCTCCTGCTGCTGCCGGGCAAGCTCCAT +
Preference number: 6 (lower is better)
Translates to: LMLLLNQLLLLL*NLLLLLPGKLH
Trigger: ATGGAGCTTGCCCGGCAGCAGCAGGAGCAGATTGCAAAGCAGCAGCAGCAGCTGATTCAGCAGCAGCATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272193.10
ENST00000367203.8
ENST00000367204.6
ENST00000480326.1
ENST00000618875.4
CDS GCA 72 bp TTGATAAAATCTGGAACCCAGGGAGGAGAAGGGACCTaGTCAAGGTCGCATCATGCCGCCGGCTCTCCCCTA +
Preference number: 6 (lower is better)
Translates to: LIKSGTQGGEGT*SRSHHAAGSPL
Trigger: TAGGGGAGAGCCGGCGGCATGATGCGACCTTGAGCAGGTCCCTTCTCCTCCCTGGGTTCCAGATTTTATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525258.1
CDS GCA 72 bp GGGGCTCCTCATGGACATCCATTCATGGAGCACTGCTaGCGCAGACATCATCAGCCATTAGCCTCCCAACAG +
Preference number: 6 (lower is better)
Translates to: GAPHGHPFMEHC*RRHHQPLASQQ
Trigger: CTGTTGGGAGGCTAATGGCTGATGATGTCTGCGGCAGCAGTGCTCCATGAATGGATGTCCATGAGGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528591.5
CDS CAA 72 bp TCTTATGCTGCTGCTGAATCAGCTGCTGCTGCTGCTTaGCAATCTGCTCCTGCTGCTGCCGGGCAAGCTCCA +
Preference number: 6 (lower is better)
Translates to: SYAAAESAAAAA*QSAPAAAGQAP
Trigger: TGGAGCTTGCCCGGCAGCAGCAGGAGCAGATTGCAAAGCAGCAGCAGCAGCTGATTCAGCAGCAGCATAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272193.10
ENST00000367203.8
ENST00000367204.6
ENST00000480326.1
ENST00000618875.4
CDS TCA 72 bp GAGCCCGTTTACCCCTTTCACCACCTGAGGACACAGTaGGAGACGCCATCTGTGAACCAGAAAGTCAGCCCT +
Preference number: 6 (lower is better)
Translates to: EPVYPFHHLRTQ*ETPSVNQKVSP
Trigger: AGGGCTGACTTTCTGGTTCACAGATGGCGTCTCTCACTGTGTCCTCAGGTGGTGAAAGGGGTAAACGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS GCA 72 bp CAAAATAAATCCCAGACTCCATGCTCCCTCCCCAACTaGCCTGTACCGTCAGGTCCCACACCCTTGTCTGAC +
Preference number: 6 (lower is better)
Translates to: QNKSQTPCSLPN*PVPSGPTPLSD
Trigger: GTCAGACAAGGGTGTGGGACCTGACGGTACAGGGCAGTTGGGGAGGGAGCATGGAGTCTGGGATTTATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS TCA 72 bp CCCATCGGAGGGATCCAGTGGGACACACTCAGGCTTTaGAGCAAGACAGGTCTGGGGTCAAATTCCCATTTC +
Preference number: 6 (lower is better)
Translates to: PIGGIQWDTLRL*SKTGLGSNSHF
Trigger: GAAATGGGAATTTGACCCCAGACCTGTCTTGCTTCAAAGCCTGAGTGTGTCCCACTGGATCCCTCCGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272193.10
CDS TCA 72 bp CAACTGCCCTGTACCGTCAGGTCCCACACCCTTGTCTaGCACATGGCCATTCTGCTGAATTTCAGTGATGGG +
Preference number: 6 (lower is better)
Translates to: QLPCTVRSHTLV*HMAILLNFSDG
Trigger: CCCATCACTGAAATTCAGCAGAATGGCCATGTGTCAGACAAGGGTGTGGGACCTGACGGTACAGGGCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS GCA 72 bp TGTCCACACTCCTGGGGTAATTATGGGCAGCATCTCTaGCCTGTCCCCATAACTCTCTGTCACTGCCCTAGT +
Preference number: 6 (lower is better)
Translates to: CPHSWGNYGQHL*PVPITLCHCPS
Trigger: ACTAGGGCAGTGACAGAGAGTTATGGGGACAGGGCAGAGATGCTGCCCATAATTACCCCAGGAGTGTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS GCA 72 bp AGTGTTCCCTCCTGTTCTTCCACAGGGCGGCTGCATTaGATGTCCTCAGGGATATGCCACTTACACTGGCTA +
Preference number: 6 (lower is better)
Translates to: SVPSCSSTGRLH*MSSGICHLHWL
Trigger: TAGCCAGTGTAAGTGGCATATCCCTGAGGACATGCAATGCAGCCGCCCTGTGGAAGAACAGGAGGGAACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525258.1
CDS CCA 72 bp CCACACGGTCCATGGTGTCTTTCTACAGCCCCTGAATaGATGAAGATGGGGCCTGGCTTTCTCAGTCCTTTG +
Preference number: 6 (lower is better)
Translates to: PHGPWCLSTAPE*MKMGPGFLSPL
Trigger: CAAAGGACTGAGAAAGCCAGGCCCCATCTTCATCCATTCAGGGGCTGTAGAAAGACACCATGGACCGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS CAA 90 bp GGACAACCATCCCATCGGAGGGATCCAGTGGGACACACTCAGGCTTaGAAGCAAGACAGGTCTGGGGTCAAATTCCCATTTCAACCCATC +
Preference number: 6 (lower is better)
Translates to: GQPSHRRDPVGHTQA*KQDRSGVKFPFQPI
Trigger: GATGGGTTGAAATGGGAATTTGACCCCAGACCTGTCTTGCTTCAAAGCCTGAGTGTGTCCCACTGGATCCCTCCGATGGGATGGTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272193.10
CDS CCA 72 bp ACTTCTTTCAAATTTCGGTTGAAGTCCAGCTTCTCCTaGCTTCCAGAGGCAGCCTCCGACACTCCTGGTCTC +
Preference number: 6 (lower is better)
Translates to: TSFKFRLKSSFS*LPEAASDTPGL
Trigger: GAGACCAGGAGTGTCGGAGGCTGCCTCTGGAAGCCAGGAGAAGCTGGACTTCAACCGAAATTTGAAAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367203.8
ENST00000367204.6
ENST00000528591.5
ENST00000534185.1
ENST00000618875.4
CDS CAA 72 bp TCCCATCGGAGGGATCCAGTGGGACACACTCAGGCTTaGAAGCAAGACAGGTCTGGGGTCAAATTCCCATTT +
Preference number: 6 (lower is better)
Translates to: SHRRDPVGHTQA*KQDRSGVKFPF
Trigger: AAATGGGAATTTGACCCCAGACCTGTCTTGCTTCAAAGCCTGAGTGTGTCCCACTGGATCCCTCCGATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272193.10
CDS TCA 72 bp TACCCCCTGGAACTATGTGACTCTGGCCTGAATCCCTaGTGCTTGGAATGCCCAGACAGATATGATGAGGGA +
Preference number: 6 (lower is better)
Translates to: YPLELCDSGLNP*CLECPDRYDEG
Trigger: TCCCTCATCATATCTGTCTGGGCATTCCAAGCATCAGGGATTCAGGCCAGAGTCACATAGTTCCAGGGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525258.1
CDS TCA 72 bp GACAACAGTACCCCCTGGAACTATGTGACTCTGGCCTaGATCCCTGATGCTTGGAATGCCCAGACAGATATG +
Preference number: 6 (lower is better)
Translates to: DNSTPWNYVTLA*IPDAWNAQTDM
Trigger: CATATCTGTCTGGGCATTCCAAGCATCAGGGATTCAGGCCAGAGTCACATAGTTCCAGGGGGTACTGTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525258.1
CDS CAA 72 bp TTCTCTATGGCTGGCACCACTTCTTTCAAATTTCGGTaGAAGTCCAGCTTCTCCTGGCTTCCAGAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: FSMAGTTSFKFR*KSSFSWLPEAA
Trigger: GGCTGCCTCTGGAAGCCAGGAGAAGCTGGACTTCAACCGAAATTTGAAAGAAGTGGTGCCAGCCATAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367203.8
ENST00000367204.6
ENST00000528591.5
ENST00000534185.1
ENST00000618875.4
CDS TCA 72 bp AGACTAGAAATGACAACAGTACCCCCTGGAACTATGTaGCTCTGGCCTGAATCCCTGATGCTTGGAATGCCC +
Preference number: 6 (lower is better)
Translates to: RLEMTTVPPGTM*LWPESLMLGMP
Trigger: GGGCATTCCAAGCATCAGGGATTCAGGCCAGAGTCACATAGTTCCAGGGGGTACTGTTGTCATTTCTAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525258.1
CDS CCA 72 bp ACCAGAAAGTCAGCCCTCACCAGACACCAAATATGCTaGCTTTATGATCTTGGAATTCACAGCCCCCAGAAC +
Preference number: 6 (lower is better)
Translates to: TRKSALTRHQIC*LYDLGIHSPQN
Trigger: GTTCTGGGGGCTGTGAATTCCAAGATCATAAAGCCAGCATATTTGGTGTCTGGTGAGGGCTGACTTTCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS CAA 72 bp CCCTCACCAGACACCAAATATGCTGGCTTTATGATCTaGGAATTCACAGCCCCCAGAACTGTATGTGAGGAA +
Preference number: 6 (lower is better)
Translates to: PSPDTKYAGFMI*EFTAPRTVCEE
Trigger: TTCCTCACATACAGTTCTGGGGGCTGTGAATTCCAAGATCATAAAGCCAGCATATTTGGTGTCTGGTGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS CCA 72 bp GGAATAACATCTGTTGTTTATGAGCCACACGGTCCATaGTGTCTTTCTACAGCCCCTGAATGGATGAAGATG +
Preference number: 6 (lower is better)
Translates to: GITSVVYEPHGP*CLSTAPEWMKM
Trigger: CATCTTCATCCATTCAGGGGCTGTAGAAAGACACCATGGACCGTGTGGCTCATAAACAACAGATGTTATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS CCA 72 bp CTGCATTGCATGTCCTCAGGGATATGCCACTTACACTaGCTAGTTATTGTGCATGTCAATAGACTAGAAATG +
Preference number: 6 (lower is better)
Translates to: LHCMSSGICHLH*LVIVHVNRLEM
Trigger: CATTTCTAGTCTATTGACATGCACAATAACTAGCCAGTGTAAGTGGCATATCCCTGAGGACATGCAATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525258.1
CDS TCA 72 bp AAAGAGGATGATTCTTCTACCAGACAGATCCAAAACTaGGGCCCAGAAAGTCCACATAGCAAATTAATGGAT +
Preference number: 6 (lower is better)
Translates to: KEDDSSTRQIQN*GPESPHSKLMD
Trigger: ATCCATTAATTTGCTATGTGGACTTTCTGGGCCTCAGTTTTGGATCTGTCTGGTAGAAGAATCATCCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS TCA 72 bp AGATTAGATGAGGCTCTGGACTTGAAACTTTTGAACTaGTGCTGGAACAAGTTAAGATTTGGGAGCCTATTG +
Preference number: 6 (lower is better)
Translates to: RLDEALDLKLLN*CWNKLRFGSLL
Trigger: CAATAGGCTCCCAAATCTTAACTTGTTCCAGCATCAGTTCAAAAGTTTCAAGTCCAGAGCCTCATCTAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS GCA 72 bp GTAAATGTACTAGAGTTGGAGAGACTAGACCTGGATTaGTACATCATTTTACATCTGGAAAGGGCTTTATGG +
Preference number: 6 (lower is better)
Translates to: VNVLELERLDLD*YIILHLERALW
Trigger: CCATAAAGCCCTTTCCAGATGTAAAATGATGTAGCAATCCAGGTCTAGTCTCTCCAACTCTAGTACATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367203.8
CDS CAA 72 bp AGTAAATGTACTAGAGTTGGAGAGACTAGACCTGGATaGCTACATCATTTTACATCTGGAAAGGGCTTTATG +
Preference number: 6 (lower is better)
Translates to: SKCTRVGETRPG*LHHFTSGKGFM
Trigger: CATAAAGCCCTTTCCAGATGTAAAATGATGTAGCAATCCAGGTCTAGTCTCTCCAACTCTAGTACATTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367203.8