RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SOX11 (Homo sapiens)

Ensembl gene IDs: ENSG00000176887

Ensembl transcript IDs: ENST00000322002.5

Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGGCTCTGCCTTGCGCGTCCCGGACTACCGCCCGGGTGCCCTCTaGCACCCCCTGCTCCCCACGCCCTCACCAGTGGTTCGGCCCTCC +
Preference number: 1 (lower is better)
Translates to: QGSALRVPDYRPGAL*HPLLPTPSPVVRPS
Trigger: GGAGGGCCGAACCACTGGTGAGGGCGTGGGGAGCAGGGGGTGGCAGAGGGCACCCGGGCGGTAGTCCGGGACGCGCAAGGCAGAGCCCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 90 bp CAAGAAGAGCCAGGCACGGGGACCCGGAGCGTCAGGGCTCTGCCTTaGGCGTCCCGGACTACCGCCCGGGTGCCCTCTGCCACCCCCTGC +
Preference number: 1 (lower is better)
Translates to: QEEPGTGTRSVRALP*ASRTTARVPSATPC
Trigger: GCAGGGGGTGGCAGAGGGCACCCGGGCGGTAGTCCGGGACGCGCAAGGCAGAGCCCTGACGCTCCGGGTCCCCGTGCCTGGCTCTTCTTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 90 bp CGAGGCAAGAAGAGCCAGGCACGGGGACCCGGAGCGTCAGGGCTCTaGCTTGCGCGTCCCGGACTACCGCCCGGGTGCCCTCTGCCACCC +
Preference number: 1 (lower is better)
Translates to: RGKKSQARGPGASGL*LARPGLPPGCPLPP
Trigger: GGGTGGCAGAGGGCACCCGGGCGGTAGTCCGGGACGCGCAAGGCAGAGCCCTGACGCTCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 90 bp CTCCCAGGCACCCCGGAGACCGCGACTCGGATCGCACAGAGGCCATaGCATGTTCCTCGGGGTGCCCTCGGCCGGCCTGCCGCGTCTTCC +
Preference number: 1 (lower is better)
Translates to: LPGTPETATRIAQRP*HVPRGALGRPAASS
Trigger: GGAAGACGCGGCAGGCCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CCA 90 bp AAGAGGCAGGGAGTGGAGGAGGAGGTGAGAAAGGAAATGGGGAGCTaGAGATGGAAAGGGAGGGCAGAGAGAAAGAACACCCTTCCCCTG +
Preference number: 1 (lower is better)
Translates to: KRQGVEEEVRKEMGS*RWKGRAERKNTLPL
Trigger: CAGGGGAAGGGTGTTCTTTCTCTCTGCCCTCCCTTTCCATCTCCAGCTCCCCATTTCCTTTCTCACCTCCTCCTCCACTCCCTGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CCA 90 bp CAGGGAGTGGAGGAGGAGGTGAGAAAGGAAATGGGGAGCTGGAGATaGAAAGGGAGGGCAGAGAGAAAGAACACCCTTCCCCTGTCTTTC +
Preference number: 1 (lower is better)
Translates to: QGVEEEVRKEMGSWR*KGRAERKNTLPLSF
Trigger: GAAAGACAGGGGAAGGGTGTTCTTTCTCTCTGCCCTCCCTTTCCATCTCCAGCTCCCCATTTCCTTTCTCACCTCCTCCTCCACTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 90 bp AGATCAGCCTATCAATGGGTTTACGTTGCCAACAAGTTTCGGAACTaGAGCAGAGGGCTGCCACATAAAATCACCAGCACGGAGCACGTG +
Preference number: 1 (lower is better)
Translates to: RSAYQWVYVANKFRN*SRGLPHKITSTEHV
Trigger: CACGTGCTCCGTGCTGGTGATTTTATGTGGCAGCCCTCTGCTGCAGTTCCGAAACTTGTTGGCAACGTAAACCCATTGATAGGCTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR TCA 90 bp TCAGTAAAAATGGAAGGCCAAACCTCGGTCAATCATCTCAGTAGGTaGAAGAGTCGTGGTGATTTTGCAGTGAGTTTCAATCAGCCACTG +
Preference number: 1 (lower is better)
Translates to: SVKMEGQTSVNHLSR*KSRGDFAVSFNQPL
Trigger: CAGTGGCTGATTGAAACTCACTGCAAAATCACCACGACTCTTTCACCTACTGAGATGATTGACCGAGGTTTGGCCTTCCATTTTTACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR TCA 90 bp AATTTCTTAAAGATGGAAAGCTTACCAAAATGCCATCAGAGTCTGTaGACTACTTATAATAAACAGCAGGATCCCCACTGGCTAGGCTGC +
Preference number: 1 (lower is better)
Translates to: NFLKMESLPKCHQSL*TTYNKQQDPHWLGC
Trigger: GCAGCCTAGCCAGTGGGGATCCTGCTGTTTATTATAAGTAGTTCACAGACTCTGATGGCATTTTGGTAAGCTTTCCATCTTTAAGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 90 bp ACTTTGATACAGCAATGTCATACACCGTTTCAACACACTACACTCTaGATGCTAGATAGTCTACGAGAAGACGAAACTTTGCCATGCATT +
Preference number: 1 (lower is better)
Translates to: TLIQQCHTPFQHTTL*MLDSLREDETLPCI
Trigger: AATGCATGGCAAAGTTTCGTCTTCTCGTAGACTATCTAGCATGCAGAGTGTAGTGTGTTGAAACGGTGTATGACATTGCTGTATCAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CCA 90 bp AAATCTCAGAAAAGTATGTCAAGAGTTACATGGAGACGGTTACTTTaGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCT +
Preference number: 1 (lower is better)
Translates to: KSQKSMSRVTWRRLL*ELVNPCVRIGKAHS
Trigger: AGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCAAAGTAACCGTCTCCATGTAACTCTTGACATACTTTTCTGAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGCCCCGAGCGCTCGCTaGCAAAGGCGGCTGTCACCG +
Preference number: 2 (lower is better)
Translates to: ARPGARGGEARRARHGDPAPSAR*QRRLSP
Trigger: CGGTGACAGCCGCCTTTGGCAGCGAGCGCTCGGGGC...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CAA 90 bp GCAAGAAGAGCCAGGCACGGGGACCCGGAGCGTCAGGGCTCTGCCTaGCGCGTCCCGGACTACCGCCCGGGTGCCCTCTGCCACCCCCTG +
Preference number: 2 (lower is better)
Translates to: ARRARHGDPERQGSA*RVPDYRPGALCHPL
Trigger: CAGGGGGTGGCAGAGGGCACCCGGGCGGTAGTCCGGGACGCGCAAGGCAGAGCCCTGACGCTCCGGGTCCCCGTGCCTGGCTCTTCTTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR CCA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGACCCGACCAAGGGAGCTaGCAACCCAGGCCCCTCCAT +
Preference number: 2 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGPDQGS*QPRPLH
Trigger: ATGGAGGGGCCTGGGTTGCCAGCTCCCTTGGTCGGG...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR TCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGAGCTGTCCCCACCCTTTaGGAGGCGGGGATAGAAGTG +
Preference number: 2 (lower is better)
Translates to: APRSTRWRGKKSQARGPGAVPTL*EAGIEV
Trigger: CACTTCTATCCCCGCCTCTCAAAGGGTGGGGACAGC...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR TCA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGCCAACAACCACCTCTaGGCACACGCGAAGATGCAG +
Preference number: 2 (lower is better)
Translates to: ARPGARGGEARRARHGDPANNHL*AHAKMQ
Trigger: CTGCATCTTCGCGTGTGCTCAGAGGTGGTTGTTGGC...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGCCGCCCCGCCCCCTCTaGCTTTGTTGCAATCACGAA +
Preference number: 2 (lower is better)
Translates to: TGKRGSASGERQRDGSRPPPRPL*LCCNHE
Trigger: TTCGTGATTGCAACAAAGGCAGAGGGGGCGGGGCGG...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGAGCCTCACCACCGAATaGTCTGCGACAACAGGACCT +
Preference number: 2 (lower is better)
Translates to: ARPGARGGEARRARHGDPSLTTE*SATTGP
Trigger: AGGTCCTGTTGTCGCAGAGCATTCGGTGGTGAGGCT...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGATGTAGAATTCTCTCCTaGCACCTCCCCTCATCCGCG +
Preference number: 2 (lower is better)
Translates to: APRSTRWRGKKSQARGPGCRILS*HLPSSA
Trigger: CGCGGATGAGGGGAGGTGGCAGGAGAGAATTCTACA...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCCTAGAGGTCAAACACTaGGGCGGCGTTCTCCGCCAA +
Preference number: 2 (lower is better)
Translates to: ALTSGSALPGTPETATRILEVKH*GGVLRQ
Trigger: TTGGCGGAGAACGCCGCCGCAGTGTTTGACCTCTAG...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCACAAGGAACCCAGCTCTaGACCCTCCGAGAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPQGTQL*TLREKE
Trigger: CTCTTTCTCTCGGAGGGTGCAGAGCTGGGTTCCTTG...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGGCCAAAAGGGTCCTCTaGAGACGTCTTCCAGACTTC +
Preference number: 2 (lower is better)
Translates to: TGKRGSASGERQRDGSRPAKRVL*RRLPDF
Trigger: GAAGTCTGGAAGACGTCTGCAGAGGACCCTTTTGGC...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCCACCACCGAATGCTCTaGGACAACAGGACCTCCAGT +
Preference number: 2 (lower is better)
Translates to: ALTSGSALPGTPETATRIHHRML*DNRTSS
Trigger: ACTGGAGGTCCTGTTGTCGCAGAGCATTCGGTGGTG...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR CCA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGTTCAAACCTTCCATCTaGGGCCCCATCCACATCACA +
Preference number: 2 (lower is better)
Translates to: ARPGARGGEARRARHGDPFKPSI*GPIHIT
Trigger: TGTGATGTGGATGGGGCCCCAGATGGAAGGTTTGAA...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR TCA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGATGTCGACAGTGCATTaGGTCTGCTTTGCCACCATT +
Preference number: 2 (lower is better)
Translates to: ARPGARGGEARRARHGDPMSTVH*VCFATI
Trigger: AATGGTGGCAAAGCAGACTCAATGCACTGTCGACAT...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGACCCCTCTGCCTTTGTTaGAATCACGAATTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: APRSTRWRGKKSQARGPGPLCLC*NHEFQE
Trigger: TTCCTGAAATTCGTGATTGCAACAAAGGCAGAGGGG...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR TCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGCAATACCTTTTGTACTaGGGTCTAGGCTGTCTGGTA +
Preference number: 2 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRQYLLY*GLGCLV
Trigger: TACCAGACAGCCTAGACCTCAGTACAAAAGGTATTG...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCAGCATTGAGTCTGCTTTaGCACCATTTGCTACAAAAT +
Preference number: 2 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPALSLL*HHLLQN
Trigger: ATTTTGTAGCAAATGGTGGCAAAGCAGACTCAATGC...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCGAGCACACGCGAAGATaGAGCGTTAAAAATAAAGAA +
Preference number: 2 (lower is better)
Translates to: ALTSGSALPGTPETATRIEHTRR*SVKNKE
Trigger: TTCTTTATTTTTAACGCTGCATCTTCGCGTGTGCTC...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR CCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGTTCCATAGAGACTATTaGCGATGCGAGTTTCTATCA +
Preference number: 2 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRFHRDY*RCEFLS
Trigger: TGATAGAAACTCGCATCGCCAATAGTCTCTATGGAA...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGGTTTTCCAATTTCTTTaGGTCACGACATCTTATCAA +
Preference number: 2 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRVFQFL*VTTSYQ
Trigger: TTGATAAGATGTCGTGACGCAAAGAAATTGGAAAAC...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR TCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTCGCAGCTCGGGAGGCTaGACTCCGGGGCTGGCACGC +
Preference number: 2 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPRSSGG*TPGLAR
Trigger: GCGTGCCAGCCCCGGAGTTCAGCCTCCCGAGCTGCG...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTGGACTACCGCCCGGGTaGCCTCTGCCACCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPGLPPG*PLPPPA
Trigger: AGCAGGGGGTGGCAGAGGGCACCCGGGCGGTAGTCC...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CAA 90 bp CAACAGCCTCACCACCGAATGCTCTGCGACAACAGGACCTCCAGTTaGACTTCCATAGAGACTATTGGCGATGCGAGTTTCTATCAGTTC +
Preference number: 2 (lower is better)
Translates to: QQPHHRMLCDNRTSS*TSIETIGDASFYQF
Trigger: GAACTGATAGAAACTCGCATCGCCAATAGTCTCTATGGAAGTCAAACTGGAGGTCCTGTTGTCGCAGAGCATTCGGTGGTGAGGCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR TCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCGGTATGCAACTACCTTaGGACACGATAAAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFGMQLP*DTIKEG
Trigger: CCCTTCCTTTATCGTGTCTCAAGGTAGTTGCATACC...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTATCGCACAGAGGCCATaGCATGTTCCTCGGGGTGCC +
Preference number: 2 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPIAQRP*HVPRGA
Trigger: GGCACCCCGAGGAACATGGCATGGCCTCTGTGCGAT...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR CCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTGGTCAGGAAAAATGGTaGGGAGCGAGGGGGTGTGGA +
Preference number: 2 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPGQEKW*GARGCG
Trigger: TCCACACCCCCTCGCTCCCCACCATTTTTCCTGACC...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR TCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTGTTTCAATCAGCCACTaGAAACCTCCTCCGCTGCGG +
Preference number: 2 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPVSISH*KPPPLR
Trigger: CCGCAGCGGAGGAGGTTTTCAGTGGCTGATTGAAAC...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CAA 90 bp TTCAGGCTTTCAAAATACATAGATCAGCCTATCAATGGGTTTACGTaGCCAACAAGTTTCGGAACTGCAGCAGAGGGCTGCCACATAAAA +
Preference number: 2 (lower is better)
Translates to: FRLSKYIDQPINGFT*PTSFGTAAEGCHIK
Trigger: TTTTATGTGGCAGCCCTCTGCTGCAGTTCCGAAACTTGTTGGCAACGTAAACCCATTGATAGGCTGATCTATGTATTTTGAAAGCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CAA 90 bp TCATTGGAAACCACATCTCAACTCGGTCATATTGCTTTTAGTGGTTaGTTTCTCTGTAGAGAAGTTCTCTGTTCACAACTGCAGGCAACC +
Preference number: 2 (lower is better)
Translates to: SLETTSQLGHIAFSG*FLCREVLCSQLQAT
Trigger: GGTTGCCTGCAGTTGTGAACAGAGAACTTCTCTACAGAGAAACAAACCACTAAAAGCAATATGACCGAGTTGAGATGTGGTTTCCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR TCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTAATCAGCCTGCTAATTaGACACTTTTCAGCCTAACC +
Preference number: 2 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPNQPAN*TLFSLT
Trigger: GGTTAGGCTGAAAAGTGTTCAATTAGCAGGCTGATT...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR GCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTTGCTTTGCCACCATTTaGTACAAAATATGCAGATGG +
Preference number: 2 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPCFATI*YKICRW
Trigger: CCATCTGCATATTTTGTAGCAAATGGTGGCAAAGCA...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CAA 90 bp ACAGGCAATGATGTCGACAGTGCATTGAGTCTGCTTTGCCACCATTaGCTACAAAATATGCAGATGGTCTGTACTTTATTTAGATTATAT +
Preference number: 2 (lower is better)
Translates to: TGNDVDSALSLLCHH*LQNMQMVCTLFRLY
Trigger: ATATAATCTAAATAAAGTACAGACCATCTGCATATTTTGTAGCAAATGGTGGCAAAGCAGACTCAATGCACTGTCGACATCATTGCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 72 bp CCAGGCACGGGGACCCGGAGCGTCAGGGCTCTGCCTTaGGCGTCCCGGACTACCGCCCGGGTGCCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: PGTGTRSVRALP*ASRTTARVPSA
Trigger: GGCAGAGGGCACCCGGGCGGTAGTCCGGGACGCGCAAGGCAGAGCCCTGACGCTCCGGGTCCCCGTGCCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 72 bp AAGAGCCAGGCACGGGGACCCGGAGCGTCAGGGCTCTaGCTTGCGCGTCCCGGACTACCGCCCGGGTGCCCT +
Preference number: 3 (lower is better)
Translates to: KSQARGPGASGL*LARPGLPPGCP
Trigger: AGGGCACCCGGGCGGTAGTCCGGGACGCGCAAGGCAGAGCCCTGACGCTCCGGGTCCCCGTGCCTGGCTCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR CAA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGACGTCAGGGCTCTGCCTaGCGCGTCCCGGACTACCGC +
Preference number: 3 (lower is better)
Translates to: APRSTRWRGKKSQARGPGRQGSA*RVPDYR
Trigger: GCGGTAGTCCGGGACGCGCAAGGCAGAGCCCTGACG...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 72 bp ACCCCGGAGACCGCGACTCGGATCGCACAGAGGCCATaGCATGTTCCTCGGGGTGCCCTCGGCCGGCCTGCC +
Preference number: 3 (lower is better)
Translates to: TPETATRIAQRP*HVPRGALGRPA
Trigger: GGCAGGCCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGCGGTCTCCGGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 72 bp TTGAGAGGCGGGGATAGAAGTGCCCCGAGCGCTCGCTaGCAAAGGCGGCTGTCACCGCGAGGCTCAGCGGGG +
Preference number: 3 (lower is better)
Translates to: LRGGDRSAPSAR*QRRLSPRGSAG
Trigger: CCCCGCTGAGCCTCGCGGTGACAGCCGCCTTTGGCAGCGAGCGCTCGGGGCACTTCTATCCCCGCCTCTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR CAA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGCCGCCCCCTCTGCCTTaGTTGCAATCACGAATTTCA +
Preference number: 3 (lower is better)
Translates to: ARPGARGGEARRARHGDPPPPLP*LQSRIS
Trigger: TGAAATTCGTGATTGCAACAAAGGCAGAGGGGGCGG...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR CAA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGCCCCCTCTGCCTTTGTaGCAATCACGAATTTCAGGA +
Preference number: 3 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRPPLPL*QSRISG
Trigger: TCCTGAAATTCGTGATTGCAACAAAGGCAGAGGGGG...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR CAA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGCTGCTTTGCCACCATTaGCTACAAAATATGCAGATG +
Preference number: 3 (lower is better)
Translates to: ARPGARGGEARRARHGDPLLCHH*LQNMQM
Trigger: CATCTGCATATTTTGTAGCAAATGGTGGCAAAGCAG...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 72 bp CTTCCCCTTCCCCCTTCACCGCTAGAGGTCAAACACTaGGGCGGCGTTCTCCGCCAACAACCACCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: LPLPPSPLEVKH*GGVLRQQPPLS
Trigger: GCTCAGAGGTGGTTGTTGGCGGAGAACGCCGCCGCAGTGTTTGACCTCTAGCGGTGAAGGGGGAAGGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR CAA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCAGGTATGCAACTACCTaGAGACACGATAAAGGAAGG +
Preference number: 3 (lower is better)
Translates to: ALTSGSALPGTPETATRIRYATT*RHDKGR
Trigger: CCTTCCTTTATCGTGTCTCAAGGTAGTTGCATACCT...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 72 bp ATCACCACTACAACTTCCTCCCAAGGAACCCAGCTCTaGACCCTCCGAGAGAAAGAGCGAGCAGCGGGCGCC +
Preference number: 3 (lower is better)
Translates to: ITTTTSSQGTQL*TLREKERAAGA
Trigger: GGCGCCCGCTGCTCGCTCTTTCTCTCGGAGGGTGCAGAGCTGGGTTCCTTGGGAGGAAGTTGTAGTGGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR CAA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCTGCATTGAGTCTGCTTaGCCACCATTTGCTACAAAA +
Preference number: 3 (lower is better)
Translates to: ALTSGSALPGTPETATRICIESA*PPFATK
Trigger: TTTTGTAGCAAATGGTGGCAAAGCAGACTCAATGCA...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CCA 72 bp AGGTGGTTCTGTCCTGGTGGCCGTCACGAAGCATTATaGGATGCCATAACCACTAGGAGTCCCAAACCGGAA +
Preference number: 3 (lower is better)
Translates to: RWFCPGGRHEAL*DAITTRSPKPE
Trigger: TTCCGGTTTGGGACTCCTAGTGGTTATGGCATCCCATAATGCTTCGTGACGGCCACCAGGACAGAACCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR CAA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTGGCTGTCCCCACCCTTaGAGAGGCGGGGATAGAAGT +
Preference number: 3 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPGCPHP*RGGDRS
Trigger: ACTTCTATCCCCGCCTCTCAAAGGGTGGGGACAGCC...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 72 bp TATCAATGGGTTTACGTTGCCAACAAGTTTCGGAACTaGAGCAGAGGGCTGCCACATAAAATCACCAGCACG +
Preference number: 3 (lower is better)
Translates to: YQWVYVANKFRN*SRGLPHKITST
Trigger: CGTGCTGGTGATTTTATGTGGCAGCCCTCTGCTGCAGTTCCGAAACTTGTTGGCAACGTAAACCCATTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CCA 72 bp AAAACTGCTCTAAAACATCAGGTGGTTCTGTCCTGGTaGCCGTCACGAAGCATTATGGGATGCCATAACCAC +
Preference number: 3 (lower is better)
Translates to: KTALKHQVVLSW*PSRSIMGCHNH
Trigger: GTGGTTATGGCATCCCATAATGCTTCGTGACGGCCACCAGGACAGAACCACCTGATGTTTTAGAGCAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CCA 72 bp CTGAAAACTGCTCTAAAACATCAGGTGGTTCTGTCCTaGTGGCCGTCACGAAGCATTATGGGATGCCATAAC +
Preference number: 3 (lower is better)
Translates to: LKTALKHQVVLS*WPSRSIMGCHN
Trigger: GTTATGGCATCCCATAATGCTTCGTGACGGCCACCAGGACAGAACCACCTGATGTTTTAGAGCAGTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR CAA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTATCTGCAGCAAAAGCTaGCTGGCTTCGCATCCCAGG +
Preference number: 3 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPICSKS*LASHPR
Trigger: CCTGGGATGCGAAGCCAGCAAGCTTTTGCTGCAGAT...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CCA 72 bp GCTAAAAATCGAGAATCCAGTTTCAAACCTTCCATCTaGGGCCCCATCCACATCACAGCGTATGAGATACAT +
Preference number: 3 (lower is better)
Translates to: AKNRESSFKPSI*GPIHITAYEIH
Trigger: ATGTATCTCATACGCTGTGATGTGGATGGGGCCCCAGATGGAAGGTTTGAAACTGGATTCTCGATTTTTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR TCA 72 bp ATGGAAGGCCAAACCTCGGTCAATCATCTCAGTAGGTaGAAGAGTCGTGGTGATTTTGCAGTGAGTTTCAAT +
Preference number: 3 (lower is better)
Translates to: MEGQTSVNHLSR*KSRGDFAVSFN
Trigger: ATTGAAACTCACTGCAAAATCACCACGACTCTTTCACCTACTGAGATGATTGACCGAGGTTTGGCCTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 72 bp CAGCAATGTCATACACCGTTTCAACACACTACACTCTaGATGCTAGATAGTCTACGAGAAGACGAAACTTTG +
Preference number: 3 (lower is better)
Translates to: QQCHTPFQHTTL*MLDSLREDETL
Trigger: CAAAGTTTCGTCTTCTCGTAGACTATCTAGCATGCAGAGTGTAGTGTGTTGAAACGGTGTATGACATTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CCA 72 bp TTTCAGGCTTTCAAAATACATAGATCAGCCTATCAATaGGTTTACGTTGCCAACAAGTTTCGGAACTGCAGC +
Preference number: 3 (lower is better)
Translates to: FQAFKIHRSAYQ*VYVANKFRNCS
Trigger: GCTGCAGTTCCGAAACTTGTTGGCAACGTAAACCCATTGATAGGCTGATCTATGTATTTTGAAAGCCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 72 bp GACCTCCAGTTTGACTTCCATAGAGACTATTGGCGATaGGAGTTTCTATCAGTTCCAGCTGATTTATTAAAA +
Preference number: 3 (lower is better)
Translates to: DLQFDFHRDYWR*EFLSVPADLLK
Trigger: TTTTAATAAATCAGCTGGAACTGATAGAAACTCGCATCGCCAATAGTCTCTATGGAAGTCAAACTGGAGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR-3UTR CAA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTTGTTTTCCAATTTCTTaGCGTCACGACATCTTATCA +
Preference number: 3 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPCFPIS*RHDILS
Trigger: TGATAAGATGTCGTGACGCAAAGAAATTGGAAAACA...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR GCA 72 bp CAAAAGTTCCCAAATCATTTAAAACAGTCCTATCTGTaGACTGGCAGAGGTGCTAGATCTTGTAAGAATATC +
Preference number: 3 (lower is better)
Translates to: QKFPNHLKQSYL*TGRGARSCKNI
Trigger: GATATTCTTACAAGATCTAGCACCTCTGCCAGTGCACAGATAGGACTGTTTTAAATGATTTGGGAACTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CAA 72 bp GCCAGGCACGGGGACCCGGAGCGTCAGGGCTCTGCCTaGCGCGTCCCGGACTACCGCCCGGGTGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ARHGDPERQGSA*RVPDYRPGALC
Trigger: GCAGAGGGCACCCGGGCGGTAGTCCGGGACGCGCAAGGCAGAGCCCTGACGCTCCGGGTCCCCGTGCCTGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGACGCAGCTCGGGAGGCTaGACTCCGGGGCTGGCACGC +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGRSSGG*TPGLAR
Trigger: GCGTGCCAGCCCCGGAGTTCAGCCTCCCGAGCTGCG...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGCCGCCTGCTGCACCATaGTCCGCTGCAGGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: ARPGARGGEARRARHGDPPPAAP*SAAGLD
Trigger: GTCCAGCCCTGCAGCGGATCATGGTGCAGCAGGCGG...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCATCGCCTGCTCGGGCCTaGCGCGAGGGCTCGGGGACA +
Preference number: 4 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPSPARA*REGSGT
Trigger: TGTCCCCGAGCCCTCGCGGCAGGCCCGAGCAGGCGA...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGACGGCCGCGGGGGCCTTaGGCTTGCCGCATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGRPRGP*ACRISC
Trigger: GCAAGAAATGCGGCAAGCTCAAGGCCCCCGCGGCCG...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGACGCTCACGCGCAGGCTaGCCAGCACGTAGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGRSRAG*PARSRR
Trigger: GCGACGACTACGTGCTGGGCAGCCTGCGCGTGAGCG...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGTGTAGTAGAGGCGGCTaGCGCCCCCGGCGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRCSRGG*RPRRPR
Trigger: CCTCGGGCGCCGGGGGCGGCAGCCGCCTCTACTACA...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGCCATGTTCCTCGGGGTaGCCTCGGCCGGCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRPCSSG*PRPACR
Trigger: GCGGCAGGCCGGCCGAGGGCACCCCGAGGAACATGG...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCGGACTACCGCCCGGGTaGCCTCTGCCACCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: ALTSGSALPGTPETATRIGLPPG*PLPPPA
Trigger: AGCAGGGGGTGGCAGAGGGCACCCGGGCGGTAGTCC...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCACGGATCCACCTTCGTTaGGGCGGCCCCGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPRIHLR*GGPGEL
Trigger: CAGCTCCCCGGGGCCGCCGCAACGAAGGTGGATCCG...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCCAACCCGGGCCGCTaGGTCTCGTGCGGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGSNPGR*VSCGGP
Trigger: GGGACCTCCGCACGAGACCCAGCGGCCCGGGTTGGA...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGAGGCTCTGGCTGGCGCTaGGCTTGGCCGAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGGSGWR*AWPRGP
Trigger: TGGACCCCTCGGCCAAGCCCAGCGCCAGCCAGAGCC...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGCCGGGAAGCCAGCGCTaGTGTCTCCGCGCGCCTCAA +
Preference number: 4 (lower is better)
Translates to: TGKRGSASGERQRDGSRPPGSQR*CLRAPQ
Trigger: TTGAGGCGCGCGGAGACACCAGCGCTGGCTTCCCGG...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGACGTTCATCGGCCGCTTaGTGTGGCCCGACGCCGTCT +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGRSSAA*CGPTPS
Trigger: AGACGGCGTCGGGCCACATCAAGCGGCCGATGAACG...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCAGTCAGGGCTCTGCCTTaGGCGTCCCGGACTACCGCC +
Preference number: 4 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPVRALP*ASRTTA
Trigger: GGCGGTAGTCCGGGACGCGCAAGGCAGAGCCCTGAC...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGACTGGCTAGGCTGCCGTaGACACAGCACCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGLARLP*TQHPPA
Trigger: GGCGGGTGGGTGCTGTGTGCACGGCAGCCTAGCCAG...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGCCCCACTGGCTAGGCTaGCGTGCACACAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: TGKRGSASGERQRDGSRPPHWLG*RAHSTH
Trigger: GTGGGTGCTGTGTGCACGGCAGCCTAGCCAGTGGGG...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCACCTCTCTCCGGCTCGTaGCTCCTACCGCAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPPLSGS*LLPQAP
Trigger: CGGCGCTTGCGGTAGGAGCCACGAGCCGGAGAGAGG...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCACACAGCGGCTGTGGTaGCTTCGGCGACGACGGCCG +
Preference number: 4 (lower is better)
Translates to: ALTSGSALPGTPETATRITQRLW*LRRRRP
Trigger: CGGCCGTCGTCGCCGAAGCCACCACAGCCGCTGTGT...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGACCAGCTGCTGCTCGCTaGCGCTGTGCGCGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGPAAAR*RCARFE
Trigger: CTCAAAGCGCGCACAGCGCCAGCGAGCAGCAGCTGG...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGCCCGACCAAGGGAGCTaGCAACCCAGGCCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: TGKRGSASGERQRDGSRPPDQGS*QPRPLH
Trigger: ATGGAGGGGCCTGGGTTGCCAGCTCCCTTGGTCGGG...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGACCCAGGAGCACGCGGTaGCGAGGCAAGAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGPRSTR*RGKKSQ
Trigger: CTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGG...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGCAGCAGGATCCCCACTaGCTAGGCTGCCGTGCACAC +
Preference number: 4 (lower is better)
Translates to: ARPGARGGEARRARHGDPQQDPH*LGCRAH
Trigger: GTGTGCACGGCAGCCTAGCCAGTGGGGATCCTGCTG...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCACCAGAAACACGCACTTaGCCGTCTTGCCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPPETRT*PSCPRR
Trigger: GCGGCGCGGGCAAGACGGTCAAGTGCGTGTTTCTGG...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGAGGCCCGACGCCGTCTTaGACCAGTCTGGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGGPTPS*TSLGRS
Trigger: AGAGCGACCCAGACTGGTGCAAGACGGCGTCGGGCC...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGATGCAGGAGCTGCTGGTaGGGTGGTTCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGCRSCW*GGSSSS
Trigger: GGAGGACGAGGAACCACCGCACCAGCAGCTCCTGCA...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGGGCGGCTGCAGGAGCTaGTGGTGCGGTGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRGGCRS*WCGGSS
Trigger: CGAGGAACCACCGCACCAGCAGCTCCTGCAGCCGCC...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGAGGAGCGTCAGGGCTCTaGCTTGCGCGTCCCGGACTA +
Preference number: 4 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGGASGL*LARPGL
Trigger: TAGTCCGGGACGCGCAAGGCAGAGCCCTGACGCTCC...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCGGTGCGGCAGCCGCCTaGTCCCCGGGTTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: ALTSGSALPGTPETATRIGAAAA*SPGLLS
Trigger: AGAAAGCAAACCCGGGGAGCAGGCGGCTGCCGCACC...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGATCGGCCGCTTGATGTaGCCCGACGCCGTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: TGKRGSASGERQRDGSRPIGRLM*PDAVLH
Trigger: GTGCAAGACGGCGTCGGGCCACATCAAGCGGCCGAT...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGAGGCTGGCGCTGGGCTTaGCCGAGGGGTCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGGWRWA*PRGPFW
Trigger: CCAAAATGGACCCCTCGGCCAAGCCCAGCGCCAGCC...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCTGCTGCCGCTGCTGCTaGACGAGGAGGTGGACACCG +
Preference number: 4 (lower is better)
Translates to: ALTSGSALPGTPETATRICCRCC*TRRWTP
Trigger: CGGTGTCCACCTCCTCGTCCAGCAGCAGCGGCAGCA...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGTGCACCATGATCCGCTaGAGGGCTGGACGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: TGKRGSASGERQRDGSRPCTMIR*RAGRSN
Trigger: GTTGGAGCGTCCAGCCCTGCAGCGGATCATGGTGCA...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGAAAGCTCTCCGCCTGCTaGACCATGATCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGKLSAC*TMIRCR
Trigger: CCTGCAGCGGATCATGGTGCAGCAGGCGGAGAGCTT...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGACGCTCAGCTCCGGCGTaGAGTAGTCGGGGAACTCGA +
Preference number: 4 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGRSAPA*SSRGTR
Trigger: TCGAGTTCCCCGACTACTGCACGCCGGAGCTGAGCG...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGCTAGAGGTCAAACACTaGGGCGGCGTTCTCCGCCAA +
Preference number: 4 (lower is better)
Translates to: ARPGARGGEARRARHGDPLEVKH*GGVLRQ
Trigger: TTGGCGGAGAACGCCGCCGCAGTGTTTGACCTCTAG...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGTGCACACAGCGGCTGTaGTGGCTTCGGCGACGACGG +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRCTQRL*WLRRRR
Trigger: CCGTCGTCGCCGAAGCCACCACAGCCGCTGTGTGCA...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGCAGCAAAAGCTTGCTaGCTTCGCATCCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ARPGARGGEARRARHGDPAAKAC*LRIPGV
Trigger: CACCCCTGGGATGCGAAGCCAGCAAGCTTTTGCTGC...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCAGCTGTCCCCACCCTTTaGGAGGCGGGGATAGAAGTG +
Preference number: 4 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPAVPTL*EAGIEV
Trigger: CACTTCTATCCCCGCCTCTCAAAGGGTGGGGACAGC...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGCCTCCCGGGGCAGGTTaGTCTCCGCTTCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRPPGAG*SPLPSS
Trigger: AGAGCTTGGAAGCGGAGAGCAACCTGCCCCGGGAGG...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCACCGCCCCGCCCCCTCTaGCTTTGTTGCAATCACGAA +
Preference number: 4 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPPPRPL*LCCNHE
Trigger: TTCGTGATTGCAACAAAGGCAGAGGGGGCGGGGCGG...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCAGGCTGGCGGGCACTTTaGCGACGTTGTAGCGTCTCA +
Preference number: 4 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPGWRAL*RRCSVS
Trigger: TGAGACGCTACAACGTCGCCAAAGTGCCCGCCAGCC...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGAGGTCAGGAAAAATGGTaGGGAGCGAGGGGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGGQEKW*GARGCG
Trigger: TCCACACCCCCTCGCTCCCCACCATTTTTCCTGACC...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCGCCAACAACCACCTCTaGGCACACGCGAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: ALTSGSALPGTPETATRIANNHL*AHAKMQ
Trigger: CTGCATCTTCGCGTGTGCTCAGAGGTGGTTGTTGGC...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGTCCAAGCTCTCCGCCTaGTGCACCATGATCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRSKLSA*CTMIRC
Trigger: GCAGCGGATCATGGTGCAGCAGGCGGAGAGCTTGGA...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGTGTTTGATCTGCAGCTaGAGCTCGTCGTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: TGKRGSASGERQRDGSRPCLICS*SSSSSS
Trigger: CGACGACGACGACGAGCTGCAGCTGCAGATCAAACA...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCGGCTCCTGTTTGATCTaGAGCTGCAGCTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: ALTSGSALPGTPETATRIGSCLI*SCSSSS
Trigger: CGACGACGAGCTGCAGCTGCAGATCAAACAGGAGCC...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGACAAGGAACCCAGCTCTaGACCCTCCGAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGQGTQL*TLREKE
Trigger: CTCTTTCTCTCGGAGGGTGCAGAGCTGGGTTCCTTG...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGTGTAGAATTCTCTCCTaGCACCTCCCCTCATCCGCG +
Preference number: 4 (lower is better)
Translates to: TGKRGSASGERQRDGSRPCRILS*HLPSSA
Trigger: CGCGGATGAGGGGAGGTGGCAGGAGAGAATTCTACA...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGAGTTTCAATCAGCCACTaGAAACCTCCTCCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGVSISH*KPPPLR
Trigger: CCGCAGCGGAGGAGGTTTTCAGTGGCTGATTGAAAC...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCAGCTTGCCGCATTTCTTaGTGGAGCCCTTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPACRIS*WSPWRS
Trigger: AGACCTCCAAGGGCTCCAGCAAGAAATGCGGCAAGC...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGGTGGGTCAAGAAGCTaGTTAGATCGAAGCACAAGC +
Preference number: 4 (lower is better)
Translates to: ARPGARGGEARRARHGDPGGSRS*LDRSTS
Trigger: GCTTGTGCTTCGATCTAACCAGCTTCTTGACCCACC...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGCCGGAGACTGCTCCATaGTCTTCCTGCGTTCGATCT +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRPETAP*SSCVRS
Trigger: AGATCGAACGCAGGAAGATCATGGAGCAGTCTCCGG...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGCAGCTGCAGTTACTGTaGGGACGCTTCCATTCGGTC +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRQLQLL*GRFHSV
Trigger: GACCGAATGGAAGCGTCCGCACAGTAACTGCAGCTG...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGAAACAAGTTTCGGAACTaGAGCAGAGGGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGNKFRN*SRGLPH
Trigger: ATGTGGCAGCCCTCTGCTGCAGTTCCGAAACTTGTT...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGGGAGCCTCCACATATaGACATCCAGGTTGCTTAAA +
Preference number: 4 (lower is better)
Translates to: ARPGARGGEARRARHGDPGSLHI*TSRLLK
Trigger: TTTAAGCAACCTGGATGTGCATATGTGGAGGCTCCC...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGTTTTTCAGCTTTTCTaGTCCCAAACCTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: ARPGARGGEARRARHGDPVFQLF*SQTWSG
Trigger: GCCACTCCAGGTTTGGGAGCAGAAAAGCTGAAAAAC...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGACCCCTCCACCTTCCTaGGCAAGTTGCAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRTPPPS*ASCKVL
Trigger: GAGGACTTTGCAACTTGCCCAGGAAGGTGGAGGGGT...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGTTCAAACCTTCCATCTaGGGCCCCATCCACATCACA +
Preference number: 4 (lower is better)
Translates to: TGKRGSASGERQRDGSRPFKPSI*GPIHIT
Trigger: TGTGATGTGGATGGGGCCCCAGATGGAAGGTTTGAA...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGAGCGCCTTTCAATATGTaGACACCAGGTCGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGAPFNM*TPGRRS
Trigger: ACTTCTCCGACCTGGTGTTCACATATTGAAAGGCGC...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGAGAAACCTGTCCATCTaGAGCAAAAGCTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TGKRGSASGERQRDGSRPRNLSI*SKSLLA
Trigger: AGCCAGCAAGCTTTTGCTGCAGATGGACAGGTTTCT...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGAAAACAGTCCTATCTGTaGACTGGCAGAGGTGCTAGA +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGKQSYL*TGRGAR
Trigger: TCTAGCACCTCTGCCAGTGCACAGATAGGACTGTTT...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCACATGTTGAGGGGGTGTaGGGTAAGGTAAACAACTCC +
Preference number: 4 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPHVEGV*GKVNNS
Trigger: GGAGTTGTTTACCTTACCCCACACCCCCTCAACATG...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGAAGTTTGATCAAACAGTaGGACGGGAGCCTCCACATA +
Preference number: 4 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGSLIKQ*DGSLHI
Trigger: TATGTGGAGGCTCCCGTCTCACTGTTTGATCAAACT...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCAACGTTTCTCCCTATGTaGTTCAAGGGAGGAGGCATA +
Preference number: 4 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPTFLPM*FKGGGI
Trigger: TATGCCTCCTCCCTTGAATCACATAGGGAGAAACGT...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGCCCCTCTGCCTTTGTTaGAATCACGAATTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: TGKRGSASGERQRDGSRPPLCLC*NHEFQE
Trigger: TTCCTGAAATTCGTGATTGCAACAAAGGCAGAGGGG...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGATTCTCTGTTCACAACTaGAGGCAACCAAAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGFSVHN*RQPKVP
Trigger: GGGAACTTTTGGTTGCCTGCAGTTGTGAACAGAGAA...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGATGTCGACAGTGCATTaGGTCTGCTTTGCCACCATT +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRMSTVH*VCFATI
Trigger: AATGGTGGCAAAGCAGACTCAATGCACTGTCGACAT...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGATTGAAGCGCCTGTCCTaGGTTCTAACAGGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGLKRLS*VLTGFK
Trigger: TTTAAAACCTGTTAGAACTCAGGACAGGCGCTTCAA...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCGGCCGCTGGGTCTCGTaGGGAGGTCCCCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFGRWVS*GGPPPP
Trigger: AGGGGGAGGGGGACCTCCGCACGAGACCCAGCGGCC...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGAAGAGACTATTGGCGATaGGAGTTTCTATCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGRDYWR*EFLSVP
Trigger: TGGAACTGATAGAAACTCGCATCGCCAATAGTCTCT...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCTGCCCTCGGCCGGCCTaGCGCGTCTTCCCCCGACTC +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFCPRPA*RVFPRL
Trigger: GAGTCGGGGGAAGACGCGGCAGGCCGGCCGAGGGCA...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGTGTCATGCTGAAAACTaGTCTAAAACATCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: ARPGARGGEARRARHGDPCHAEN*SKTSGG
Trigger: ACCACCTGATGTTTTAGAGCAGTTTTCAGCATGACA...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCGCTGAACTCCGGGGCTaGCACGCTGGGCCCCGAGCG +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFAELRG*HAGPRA
Trigger: CGCTCGGGGCCCAGCGTGCCAGCCCCGGAGTTCAGC...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCTATATTGAGAACCTaGTTAACGCCATCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGSILRT*LTPSAP
Trigger: AGGGGCTGATGGCGTTAACCAGGTTCTCAATATAGA...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGAAGATCAGCCTATCAATaGGTTTACGTTGCCAACAAG +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGRSAYQ*VYVANK
Trigger: CTTGTTGGCAACGTAAACCCATTGATAGGCTGATCT...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGCGTCACGAAGCATTATaGGATGCCATAACCACTAGG +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRRHEAL*DAITTR
Trigger: CCTAGTGGTTATGGCATCCCATAATGCTTCGTGACG...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCAGTGAAAGAGTCGTGGTaGTTTTGCAGTGAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPVKESW*FCSEFQ
Trigger: TTGAAACTCACTGCAAAATCACCACGACTCTTTCAC...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGAATCATCTCAGTAGGTaGAAGAGTCGTGGTGATTTT +
Preference number: 4 (lower is better)
Translates to: TGKRGSASGERQRDGSRPNHLSR*KSRGDF
Trigger: AAAATCACCACGACTCTTTCACCTACTGAGATGATT...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGTGCCATCAGAGTCTGTaGACTACTTATAATAAACAG +
Preference number: 4 (lower is better)
Translates to: ARPGARGGEARRARHGDPCHQSL*TTYNKQ
Trigger: CTGTTTATTATAAGTAGTTCACAGACTCTGATGGCA...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGTACTATTTTCAACCCTaGGCATTAACACTGCATACC +
Preference number: 4 (lower is better)
Translates to: TGKRGSASGERQRDGSRPYYFQP*ALTLHT
Trigger: GGTATGCAGTGTTAATGCTCAGGGTTGAAAATAGTA...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGAGCATTGAGTCTGCTTTaGCACCATTTGCTACAAAAT +
Preference number: 4 (lower is better)
Translates to: APRSTRWRGKKSQARGPGALSLL*HHLLQN
Trigger: ATTTTGTAGCAAATGGTGGCAAAGCAGACTCAATGC...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCGCCCCGAGCGCTCGCTaGCAAAGGCGGCTGTCACCG +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFAPSAR*QRRLSP
Trigger: CGGTGACAGCCGCCTTTGGCAGCGAGCGCTCGGGGC...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCAATGGGTTTACGTTaGCAACAAGTTTCGGAACTG +
Preference number: 4 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGSMGLR*QQVSEL
Trigger: CAGTTCCGAAACTTGTTGGCAACGTAAACCCATTGA...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCACAACACACTACACTCTaGATGCTAGATAGTCTACGA +
Preference number: 4 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPQHTTL*MLDSLR
Trigger: TCGTAGACTATCTAGCATGCAGAGTGTAGTGTGTTG...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCCGACAGGAGAGGCGGTaGCGACGGCGGTCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFRQERR*RRRSRQ
Trigger: CTGCCTCGACCGCCGTCGCCACCGCCTCTCCTGTCG...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGAATCAGCCTGCTAATTaGACACTTTTCAGCCTAACC +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRNQPAN*TLFSLT
Trigger: GGTTAGGCTGAAAAGTGTTCAATTAGCAGGCTGATT...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCTGCTTTGCCACCATTTaGTACAAAATATGCAGATGG +
Preference number: 4 (lower is better)
Translates to: ALTSGSALPGTPETATRICFATI*YKICRW
Trigger: CCATCTGCATATTTTGTAGCAAATGGTGGCAAAGCA...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCGAAAACCTCCTCCGCTaGGGGCGCCGCAGCTCGGGA +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFENLLR*GRRSSG
Trigger: TCCCGAGCTGCGGCGCCCGCAGCGGAGGAGGTTTTC...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCTTCCATAGAGACTATTaGCGATGCGAGTTTCTATCA +
Preference number: 4 (lower is better)
Translates to: ALTSGSALPGTPETATRIFHRDY*RCEFLS
Trigger: TGATAGAAACTCGCATCGCCAATAGTCTCTATGGAA...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCCCACGCCCTCACCAGTaGTTCGGCCCTCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFPRPHQ*FGPPRH
Trigger: GTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGTGG...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCATATGCACATCCAGGTTaGTTAAATTCACCAATTGCT +
Preference number: 4 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPYAHPG*LNSPIA
Trigger: AGCAATTGGTGAATTTAAGCAACCTGGATGTGCATA...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCTCTGTGAAAAACTCTTaGAAAAGAGACATTGGAGTG +
Preference number: 4 (lower is better)
Translates to: ALTSGSALPGTPETATRISVKNS*KRDIGV
Trigger: CACTCCAATGTCTCTTTTGCAAGAGTTTTTCACAGA...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCTCGGGGAACTCGAAGTaGGAGCCCAGGCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFSGNSK*EPRLPS
Trigger: CGAGGGCAGCCTGGGCTCCCACTTCGAGTTCCCCGA...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGTCAATTGTAAACCGCTaGTTCAATTATCCGTGGCTA +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRSIVNR*FNYPWL
Trigger: TAGCCACGGATAATTGAACCAGCGGTTTACAATTGA...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGATGTCAAGAGTTACATaGAGACGGTTACTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRMSRVT*RRLLWE
Trigger: TTCCCAAAGTAACCGTCTCCATGTAACTCTTGACAT...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGTCCCAAATGTACTACTaGAATCTGATGGTTTATCGA +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRSQMYY*NLMVYR
Trigger: TCGATAAACCATCAGATTTCAGTAGTACATTTGGGA...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCGCGAGCGGCGGCGGGTaGTGCTTGGTGATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFASGGG*CLVMFL
Trigger: CAAGAACATCACCAAGCAGCACCCGCCGCCGCTCGC...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGAGTTTTCCAATTTCTTTaGGTCACGACATCTTATCAA +
Preference number: 4 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGVFQFL*VTTSYQ
Trigger: TTGATAAGATGTCGTGACGCAAAGAAATTGGAAAAC...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCCGTCTTGCACCAGTCTaGGTCGCTCTCGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFRLAPV*VALVQG
Trigger: GCCCTGGACGAGAGCGACCCAGACTGGTGCAAGACG...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCTCTTGCTGGAGCCCTTaGAGGTCTTGGCACCGCCCG +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFSCWSP*RSWHRP
Trigger: CGGGCGGTGCCAAGACCTCCAAGGGCTCCAGCAAGA...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCGGGAGCGAGGGGGTGTaGACAGGCAAACGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFGSEGV*TGKRGS
Trigger: TGAACCCCGTTTGCCTGTCCACACCCCCTCGCTCCC...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGTTGAAGACTATCCAGTaGCAAGAATACCATGTGTAT +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRLKTIQ*QEYHVY
Trigger: ATACACATGGTATTCTTGCCACTGGATAGTCTTCAA...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGCTTAAATTCACCAATTaGTCATTGGAAACCACATCT +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRLKFTN*SLETTS
Trigger: AGATGTGGTTTCCAATGAGCAATTGGTGAATTTAAG...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGTTGCAAAAGAGACATTaGAGTGTACTATTTTCAACC +
Preference number: 4 (lower is better)
Translates to: ATRIAQRPCHVPRGALGRLQKRH*SVLFST
Trigger: GGTTGAAAATAGTACACTCCAATGTCTCTTTTGCAA...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCAGCGGCGGCGGGTGCTaGTTGGTGATGTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFSGGGC*LVMFLK
Trigger: CTTCAAGAACATCACCAAGCAGCACCCGCCGCCGCT...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTCGCTGCTGCTGCCGCTaGTGCTGGACGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPRCCCR*CWTRRW
Trigger: CCACCTCCTCGTCCAGCAGCAGCGGCAGCAGCAGCG...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTGCGCCGGGGCCCCTCTaGCCTAGCAGCTGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPAPGPL*PSSCSY
Trigger: GTAACTGCAGCTGCTAGGCCAGAGGGGCCCCGGCGC...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCGTGGTTCTGTCCTGGTaGCCGTCACGAAGCATTATG +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFVVLSW*PSRSIM
Trigger: CATAATGCTTCGTGACGGCCACCAGGACAGAACCAC...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CAA 72 bp CACCACCGAATGCTCTGCGACAACAGGACCTCCAGTTaGACTTCCATAGAGACTATTGGCGATGCGAGTTTC +
Preference number: 4 (lower is better)
Translates to: HHRMLCDNRTSS*TSIETIGDASF
Trigger: GAAACTCGCATCGCCAATAGTCTCTATGGAAGTCAAACTGGAGGTCCTGTTGTCGCAGAGCATTCGGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTCCGGGCTGCAAGCCATaGATTCGCCCTCCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPPGCKP*IRPPPC
Trigger: ACACGGAGGAGGGCGAATTCATGGCTTGCAGCCCGG...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTGAGCTGCTGGTGCGGTaGTTCCTCGTCCTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPELLVR*FLVLLV
Trigger: GACGAGGAGGACGAGGAACCACCGCACCAGCAGCTC...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTCCTTCCTGGGCAAGTTaGAAAGTCCTCGGCACCCCG +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPPSWAS*KVLGTP
Trigger: CGGGGTGCCGAGGACTTTGCAACTTGCCCAGGAAGG...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTCTCTGGCCTAGCAGCTaGAGTTACTGTGCGGACGCT +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPLWPSS*SYCADA
Trigger: AGCGTCCGCACAGTAACTGCAGCTGCTAGGCCAGAG...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCTGTACCACCAATGGCTaGATTAGTCTACATGTTGAG +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFCTTNG*ISLHVE
Trigger: CTCAACATGTAGACTAATGCAGCCATTGGTGGTACA...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTGCGCTGTGCGCGCTTTaGGAGAAATTCAAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPALCAL*EKFKLR
Trigger: CCTGAGCTTGAATTTCTCTCAAAGCGCGCACAGCGC...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTCACCACCGAATGCTCTaGGACAACAGGACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPHHRML*DNRTSS
Trigger: ACTGGAGGTCCTGTTGTCGCAGAGCATTCGGTGGTG...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTTCTGCAGCAAAAGCTTaGTGGCTTCGCATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPSAAKA*WLRIPG
Trigger: CCCTGGGATGCGAAGCCAGCAAGCTTTTGCTGCAGA...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTCAGGTGGTTCTGTCCTaGTGGCCGTCACGAAGCATT +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPQVVLS*WPSRSI
Trigger: AATGCTTCGTGACGGCCACCAGGACAGAACCACCTG...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCTCAAAAGGGAAGAAGTaGCTGAAAGTCTTACTGAAA +
Preference number: 4 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFSKGKK*LKVLLK
Trigger: TTTCAGTAAGACTTTCAGGCACTTCTTCCCTTTTGA...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTCACAGCAATAGGCCGTaGGCTGGCATGCAAACTCTA +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPHSNRP*AGMQTL
Trigger: TAGAGTTTGCATGCCAGCGCACGGCCTATTGCTGTG...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTGGAGAACAATCAAGATaGGGATCCACCTTCGTTGCG +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPGEQSR*GSTFVA
Trigger: CGCAACGAAGGTGGATCCGCATCTTGATTGTTCTCC...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTGGTATGCAACTACCTTaGGACACGATAAAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPGMQLP*DTIKEG
Trigger: CCCTTCCTTTATCGTGTCTCAAGGTAGTTGCATACC...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTCAATACCTTTTGTACTaGGGTCTAGGCTGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPQYLLY*GLGCLV
Trigger: TACCAGACAGCCTAGACCTCAGTACAAAAGGTATTG...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR TCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTACAAGCACAAGCCACTaGTATTCTCTATGTGATCAG +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPTSTSH*YSLCDQ
Trigger: CTGATCACATAGAGAATATCAGTGGCTTGTGCTTGT...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTTGGAGACGGTTACTTTaGGAACTTGTAAATCCCTGT +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPWRRLL*ELVNPC
Trigger: ACAGGGATTTACAAGTTCCCAAAGTAACCGTCTCCA...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR GCA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTGAGCACACGCGAAGATaGAGCGTTAAAAATAAAGAA +
Preference number: 4 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPEHTRR*SVKNKE
Trigger: TTCTTTATTTTTAACGCTGCATCTTCGCGTGTGCTC...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CAA 72 bp GATGTCGACAGTGCATTGAGTCTGCTTTGCCACCATTaGCTACAAAATATGCAGATGGTCTGTACTTTATTT +
Preference number: 4 (lower is better)
Translates to: DVDSALSLLCHH*LQNMQMVCTLF
Trigger: AAATAAAGTACAGACCATCTGCATATTTTGTAGCAAATGGTGGCAAAGCAGACTCAATGCACTGTCGACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CAA 72 bp ACCACATCTCAACTCGGTCATATTGCTTTTAGTGGTTaGTTTCTCTGTAGAGAAGTTCTCTGTTCACAACTG +
Preference number: 4 (lower is better)
Translates to: TTSQLGHIAFSG*FLCREVLCSQL
Trigger: CAGTTGTGAACAGAGAACTTCTCTACAGAGAAACAAACCACTAAAAGCAATATGACCGAGTTGAGATGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
3UTR CAA 72 bp ATTGCTCATTGGAAACCACATCTCAACTCGGTCATATaGCTTTTAGTGGTTTGTTTCTCTGTAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: IAHWKPHLNSVI*LLVVCFSVEKF
Trigger: GAACTTCTCTACAGAGAAACAAACCACTAAAAGCAATATGACCGAGTTGAGATGTGGTTTCCAATGAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS CCA 90 bp CGGCCGCCGGCGCGGTGGGAGCTGCGGTCGCGACAGGAGAGGCGGTaGCGACGGCGGTCGAGGCAGCCCGGGACCCCTCTCTCCGGCTCG +
Preference number: 5 (lower is better)
Translates to: RPPARWELRSRQERR*RRRSRQPGTPLSGS
Trigger: CGAGCCGGAGAGAGGGGTCCCGGGCTGCCTCGACCGCCGTCGCCACCGCCTCTCCTGTCGCGACCGCAGCTCCCACCGCGCCGGCGGCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 90 bp GGCTGTGGTGGCTTCGGCGACGACGGCCGCCGGCGCGGTGGGAGCTaGGGTCGCGACAGGAGAGGCGGTGGCGACGGCGGTCGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: GCGGFGDDGRRRGGS*GRDRRGGGDGGRGS
Trigger: GCTGCCTCGACCGCCGTCGCCACCGCCTCTCCTGTCGCGACCGCAGCTCCCACCGCGCCGGCGGCCGTCGTCGCCGAAGCCACCACAGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS CCA 90 bp TGGCGACGGCGGTCGAGGCAGCCCGGGACCCCTCTCTCCGGCTCGTaGCTCCTACCGCAAGCGCCGGACCCCGAGCTCTCCCAGGCGCGC +
Preference number: 5 (lower is better)
Translates to: WRRRSRQPGTPLSGS*LLPQAPDPELSQAR
Trigger: GCGCGCCTGGGAGAGCTCGGGGTCCGGCGCTTGCGGTAGGAGCCACGAGCCGGAGAGAGGGGTCCCGGGCTGCCTCGACCGCCGTCGCCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGCGGCCGCGGGGGCCTaGAGCTTGCCGCATTTCTTG +
Preference number: 5 (lower is better)
Translates to: ARPGARGGEARRARHGDPAAAGA*SLPHFL
Trigger: CAAGAAATGCGGCAAGCTCAAGGCCCCCGCGGCCGC...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp GCGACTCGGATCGCACAGAGGCCATGCCATGTTCCTCGGGGTGCCCTCGGCCGGGAGCCCTTGGAGGTCTaGGCACCGCCCGCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: ATRIAQRPCHVPRGALGREPLEV*APPAPP
Trigger: CGGAGGCGCGGGCGGTGCCAAGACCTCCAAGGGCTC...CCGGCCGAGGGCACCCCGAGGAACATGGCATGGCCTCTGTGCGATCCGAGTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGACGTCAGGGCTCTGCCTaGCGCGTCCCGGACTACCGC +
Preference number: 5 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGRQGSA*RVPDYR
Trigger: GCGGTAGTCCGGGACGCGCAAGGCAGAGCCCTGACG...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 90 bp GCCTCCCGGGGCAGGTTGCTCTCCGCTTCCAAGCTCTCCGCCTGCTaGACCATGATCCGCTGCAGGGCTGGACGCTCCAACCCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: ASRGRLLSASKLSAC*TMIRCRAGRSNPGR
Trigger: GCGGCCCGGGTTGGAGCGTCCAGCCCTGCAGCGGATCATGGTGCAGCAGGCGGAGAGCTTGGAAGCGGAGAGCAACCTGCCCCGGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 90 bp CGAACATCAGGTCGTCGGCGTCCTCGCCGCTGCTGCCGCTGCTGCTaGCGCTGCTGCTGGACGAGGAGGTGGACACCGAGCGCGAGGACG +
Preference number: 5 (lower is better)
Translates to: RTSGRRRPRRCCRCC*RCCWTRRWTPSART
Trigger: CGTCCTCGCGCTCGGTGTCCACCTCCTCGTCCAGCAGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGAGGACGCCGACGACCTGATGTTCG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS CCA 90 bp CGCTTCCAAGCTCTCCGCCTGCTGCACCATGATCCGCTGCAGGGCTaGACGCTCCAACCCGGGCCGCTGGGTCTCGTGCGGAGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: RFQALRLLHHDPLQG*TLQPGPLGLVRRSP
Trigger: GGGGGACCTCCGCACGAGACCCAGCGGCCCGGGTTGGAGCGTCCAGCCCTGCAGCGGATCATGGTGCAGCAGGCGGAGAGCTTGGAAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCTGGCCCGACGCCGTCTaGCACCAGTCTGGGTCGCTC +
Preference number: 5 (lower is better)
Translates to: ALTSGSALPGTPETATRIWPDAV*HQSGSL
Trigger: GAGCGACCCAGACTGGTGCAAGACGGCGTCGGGCCA...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGTTCTTGCTGGAGCCCTaGGAGGTCTTGGCACCGCCC +
Preference number: 5 (lower is better)
Translates to: ARPGARGGEARRARHGDPFLLEP*EVLAPP
Trigger: GGGCGGTGCCAAGACCTCCAAGGGCTCCAGCAAGAA...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 90 bp AGCGCCTCCCGGGGCAGGTTGCTCTCCGCTTCCAAGCTCTCCGCCTaGTGCACCATGATCCGCTGCAGGGCTGGACGCTCCAACCCGGGC +
Preference number: 5 (lower is better)
Translates to: SASRGRLLSASKLSA*CTMIRCRAGRSNPG
Trigger: GCCCGGGTTGGAGCGTCCAGCCCTGCAGCGGATCATGGTGCAGCAGGCGGAGAGCTTGGAAGCGGAGAGCAACCTGCCCCGGGAGGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 90 bp CGTCTCAGCAGCTGCGACGGCTGCTGCCCCGGCGGCTGCAGGAGCTaGTGGTGCGGTGGTTCCTCGTCCTCCTCGTCCGGCTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: RLSSCDGCCPGGCRS*WCGGSSSSSSGSCL
Trigger: CAAACAGGAGCCGGACGAGGAGGACGAGGAACCACCGCACCAGCAGCTCCTGCAGCCGCCGGGGCAGCAGCCGTCGCAGCTGCTGAGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGAGCTTGCCGCATTTCTaGCTGGAGCCCTTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: ARPGARGGEARRARHGDPSLPHF*LEPLEV
Trigger: GACCTCCAAGGGCTCCAGCAAGAAATGCGGCAAGCT...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCGCCTGCTCCCCGGGTTaGCTTTCTTCCTCTCACCCC +
Preference number: 5 (lower is better)
Translates to: ALTSGSALPGTPETATRIACSPG*LSSSHP
Trigger: GGGGTGAGAGGAAGAAAGCAAACCCGGGGAGCAGGC...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 90 bp TTGCTCTCCGCTTCCAAGCTCTCCGCCTGCTGCACCATGATCCGCTaGAGGGCTGGACGCTCCAACCCGGGCCGCTGGGTCTCGTGCGGA +
Preference number: 5 (lower is better)
Translates to: LLSASKLSACCTMIR*RAGRSNPGRWVSCG
Trigger: TCCGCACGAGACCCAGCGGCCCGGGTTGGAGCGTCCAGCCCTGCAGCGGATCATGGTGCAGCAGGCGGAGAGCTTGGAAGCGGAGAGCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 90 bp TCAAGCTCAGGTCGAACATCAGGTCGTCGGCGTCCTCGCCGCTGCTaGCGCTGCTGCTGCCGCTGCTGCTGGACGAGGAGGTGGACACCG +
Preference number: 5 (lower is better)
Translates to: SSSGRTSGRRRPRRC*RCCCRCCWTRRWTP
Trigger: CGGTGTCCACCTCCTCGTCCAGCAGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGAGGACGCCGACGACCTGATGTTCGACCTGAGCTTGA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCACCTTCCTGGGCAAGTaGCAAAGTCCTCGGCACCCC +
Preference number: 5 (lower is better)
Translates to: ALTSGSALPGTPETATRITFLGK*QSPRHP
Trigger: GGGGTGCCGAGGACTTTGCAACTTGCCCAGGAAGGT...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCAGGCGGCGGGTGCTGCTaGGTGATGTTCTTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPGGGCC*VMFLKL
Trigger: CAGCTTCAAGAACATCACCAAGCAGCACCCGCCGCC...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGTTCCTGCGTTCGATCTaGGACCATACCATGAACGCG +
Preference number: 5 (lower is better)
Translates to: TGKRGSASGERQRDGSRPFLRSI*DHTMNA
Trigger: CGCGTTCATGGTATGGTCCAAGATCGAACGCAGGAA...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCGGCGCTGTGCGCGCTTaGAGAGAAATTCAAGCTCAG +
Preference number: 5 (lower is better)
Translates to: ALTSGSALPGTPETATRIGAVRA*REIQAQ
Trigger: CTGAGCTTGAATTTCTCTCAAAGCGCGCACAGCGCC...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS TCA 90 bp GCTGCTGGTGCGGTGGTTCCTCGTCCTCCTCGTCCGGCTCCTGTTTaGTCTGCAGCTGCAGCTCGTCGTCGTCGTCGTCGTCGTCGTCGT +
Preference number: 5 (lower is better)
Translates to: AAGAVVPRPPRPAPV*SAAAARRRRRRRRR
Trigger: ACGACGACGACGACGACGACGACGACGAGCTGCAGCTGCAGATCAAACAGGAGCCGGACGAGGAGGACGAGGAACCACCGCACCAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 90 bp AATTCAAGCTCAGGTCGAACATCAGGTCGTCGGCGTCCTCGCCGCTaGTGCCGCTGCTGCTGCCGCTGCTGCTGGACGAGGAGGTGGACA +
Preference number: 5 (lower is better)
Translates to: NSSSGRTSGRRRPRR*CRCCCRCCWTRRWT
Trigger: TGTCCACCTCCTCGTCCAGCAGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGAGGACGCCGACGACCTGATGTTCGACCTGAGCTTGAATT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGACCCCCTCTGCCTTTGTaGCAATCACGAATTTCAGGA +
Preference number: 5 (lower is better)
Translates to: APRSTRWRGKKSQARGPGPPLPL*QSRISG
Trigger: TCCTGAAATTCGTGATTGCAACAAAGGCAGAGGGGG...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGACCGCCCCCTCTGCCTTaGTTGCAATCACGAATTTCA +
Preference number: 5 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGPPPLP*LQSRIS
Trigger: TGAAATTCGTGATTGCAACAAAGGCAGAGGGGGCGG...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS TCA 90 bp GCACCCTCCGAGAGAAAGAGCGAGCAGCGGGCGCCTTTCAATATGTaGACACCAGGTCGGAGAAGTTCGCCTCCAGCCAGTCCCCCGCGA +
Preference number: 5 (lower is better)
Translates to: APSERKSEQRAPFNM*TPGRRSSPPASPPR
Trigger: TCGCGGGGGACTGGCTGGAGGCGAACTTCTCCGACCTGGTGTTCACATATTGAAAGGCGCCCGCTGCTCGCTCTTTCTCTCGGAGGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp ACAGGCAAACGGGGTTCAGCGAGCGGGGAGCGCCAGCGGGATGGGTCGCGCCCGATGGAGACGGTTACTTaGGGAACTTGTAAATCCCTG +
Preference number: 5 (lower is better)
Translates to: TGKRGSASGERQRDGSRPMETVT*GTCKSL
Trigger: CAGGGATTTACAAGTTCCCAAAGTAACCGTCTCCAT...CGGGCGCGACCCATCCCGCTGGCGCTCCCCGCTCGCTGAACCCCGTTTGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCGCGGATCCACCTTCGTaGCGGCGGCCCCGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFADPPS*RRPRGA
Trigger: AGCTCCCCGGGGCCGCCGCAACGAAGGTGGATCCGC...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGAATCAATGGGTTTACGTaGCCAACAAGTTTCGGAACT +
Preference number: 5 (lower is better)
Translates to: APRSTRWRGKKSQARGPGINGFT*PTSFGT
Trigger: AGTTCCGAAACTTGTTGGCAACGTAAACCCATTGAT...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp GCGCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGCTCAACTCGGTCATATaGCTTTTAGTGGTTTGTTTC +
Preference number: 5 (lower is better)
Translates to: ARPGARGGEARRARHGDPLNSVI*LLVVCF
Trigger: GAAACAAACCACTAAAAGCAATATGACCGAGTTGAG...CGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCATGCATTGAGTCTGCTTaGCCACCATTTGCTACAAAA +
Preference number: 5 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPCIESA*PPFATK
Trigger: TTTTGTAGCAAATGGTGGCAAAGCAGACTCAATGCA...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGAAAATCCAGTTCTATATaGAGAACCTGGTTAACGCCA +
Preference number: 5 (lower is better)
Translates to: APRSTRWRGKKSQARGPGKSSSI*RTWLTP
Trigger: TGGCGTTAACCAGGTTCTCAATATAGAACTGGATTT...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCGCGTTCATCGGCCGCTaGATGTGGCCCGACGCCGTC +
Preference number: 5 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFAFIGR*MWPDAV
Trigger: GACGGCGTCGGGCCACATCAAGCGGCCGATGAACGC...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp GCGCCCAGGAGCACGCGGTGGCGAGGCAAGAAGAGCCAGGCACGGGGACCCGGATGTTTTCCAATTTCTTaGCGTCACGACATCTTATCA +
Preference number: 5 (lower is better)
Translates to: APRSTRWRGKKSQARGPGCFPIS*RHDILS
Trigger: TGATAAGATGTCGTGACGCAAAGAAATTGGAAAACA...TCCGGGTCCCCGTGCCTGGCTCTTCTTGCCTCGCCACCGCGTGCTCCTGGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp GCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGATCATATGCACATCCAGGTaGCTTAAATTCACCAATTGC +
Preference number: 5 (lower is better)
Translates to: ALTSGSALPGTPETATRIICTSR*LKFTNC
Trigger: GCAATTGGTGAATTTAAGCAACCTGGATGTGCATAT...GATCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp TCACCGCGAGGCTCAGCGGGGACGCGGCCCGCCGCAGAGAACACACAAGCCCCACATTCTACAAATAATTaGCCCAGTGTCTGTAGTCAT +
Preference number: 5 (lower is better)
Translates to: SPRGSAGTRPAAENTQAPHSTNN*PSVCSH
Trigger: ATGACTACAGACACTGGGCAAATTATTTGTAGAATG...TGGGGCTTGTGTGTTCTCTGCGGCGGGCCGCGTCCCCGCTGAGCCTCGCGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp ACGCCCTCACCAGTGGTTCGGCCCTCCCAGGCACCCCGGAGACCGCGACTCGGAAAGTTTCATGTGGCCTaGGAAAATACACACTTGTTA +
Preference number: 5 (lower is better)
Translates to: TPSPVVRPSQAPRRPRLGKFHVA*ENTHLL
Trigger: TAACAAGTGTGTATTTTCCAAGGCCACATGAAACTT...TCCGAGTCGCGGTCTCCGGGGTGCCTGGGAGGGCCGAACCACTGGTGAGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCGCGGGGGCCTTGAGCTaGCCGCATTTCTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFAGALS*PHFLLE
Trigger: CTCCAGCAAGAAATGCGGCAAGCTCAAGGCCCCCGC...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCTCCAGAAACACGCACTaGACCGTCTTGCCCGCGCCG +
Preference number: 5 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFSRNTH*TVLPAP
Trigger: CGGCGCGGGCAAGACGGTCAAGTGCGTGTTTCTGGA...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCGGCTGTCCCCACCCTTaGAGAGGCGGGGATAGAAGT +
Preference number: 5 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFGCPHP*RGGDRS
Trigger: ACTTCTATCCCCGCCTCTCAAAGGGTGGGGACAGCC...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCGCATTAGTCTACATGTaGAGGGGGTGTGGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFALVYM*RGCGVR
Trigger: CCTTACCCCACACCCCCTCAACATGTAGACTAATGC...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp CAACTCCCTAGAGTAACAGTTGTGCTGCCAAAAGGGTCCTCTGCAGACGTCTTCTTCACCAATTGCTCATaGGAAACCACATCTCAACTC +
Preference number: 5 (lower is better)
Translates to: QLPRVTVVLPKGSSADVFFTNCS*ETTSQL
Trigger: GAGTTGAGATGTGGTTTCCAATGAGCAATTGGTGAA...GAAGACGTCTGCAGAGGACCCTTTTGGCAGCACAACTGTTACTCTAGGGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTAGGTATGCAACTACCTaGAGACACGATAAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPRYATT*RHDKGR
Trigger: CCTTCCTTTATCGTGTCTCAAGGTAGTTGCATACCT...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTAAGCTCCCTGCAGTTTaGTTAAGAATCGGATGCATA +
Preference number: 5 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPKLPAV*LRIGCI
Trigger: TATGCATCCGATTCTTAACAAAACTGCAGGGAGCTT...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS-3UTR CAA 90 bp TGGGAACTTGTAAATCCCTGTGTTAGGATAGGTAAGGCTCATTCTTGTTATCCTCTTGCAAAAGAGACATaGGAGTGTACTATTTTCAAC +
Preference number: 5 (lower is better)
Translates to: WELVNPCVRIGKAHSCYPLAKET*ECTIFN
Trigger: GTTGAAAATAGTACACTCCAATGTCTCTTTTGCAAG...AGGATAACAAGAATGAGCCTTACCTATCCTAACACAGGGATTTACAAGTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 72 bp GGCTTCGGCGACGACGGCCGCCGGCGCGGTGGGAGCTaGGGTCGCGACAGGAGAGGCGGTGGCGACGGCGGT +
Preference number: 6 (lower is better)
Translates to: GFGDDGRRRGGS*GRDRRGGGDGG
Trigger: ACCGCCGTCGCCACCGCCTCTCCTGTCGCGACCGCAGCTCCCACCGCGCCGGCGGCCGTCGTCGCCGAAGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS CAA 90 bp GGGGCCTTGAGCTTGCCGCATTTCTTGCTGGAGCCCTTGGAGGTCTaGGCACCGCCCGCGCCTCCGCCCGCGCTCCCGCCGCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: GALSLPHFLLEPLEV*APPAPPPALPPPPP
Trigger: CGGCGGCGGCGGCGGGAGCGCGGGCGGAGGCGCGGGCGGTGCCAAGACCTCCAAGGGCTCCAGCAAGAAATGCGGCAAGCTCAAGGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS CCA 72 bp CGGTCGAGGCAGCCCGGGACCCCTCTCTCCGGCTCGTaGCTCCTACCGCAAGCGCCGGACCCCGAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: RSRQPGTPLSGS*LLPQAPDPELS
Trigger: GGAGAGCTCGGGGTCCGGCGCTTGCGGTAGGAGCCACGAGCCGGAGAGAGGGGTCCCGGGCTGCCTCGACCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS CCA 72 bp ATCCGCTGCAGGGCTGGACGCTCCAACCCGGGCCGCTaGGTCTCGTGCGGAGGTCCCCCTCCCCCTCCCACC +
Preference number: 6 (lower is better)
Translates to: IRCRAGRSNPGR*VSCGGPPPPPT
Trigger: GGTGGGAGGGGGAGGGGGACCTCCGCACGAGACCCAGCGGCCCGGGTTGGAGCGTCCAGCCCTGCAGCGGAT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS CAA 90 bp GCCTTGGCGCCCGCGGCCGCGGGGGCCTTGAGCTTGCCGCATTTCTaGCTGGAGCCCTTGGAGGTCTTGGCACCGCCCGCGCCTCCGCCC +
Preference number: 6 (lower is better)
Translates to: ALAPAAAGALSLPHF*LEPLEVLAPPAPPP
Trigger: GGGCGGAGGCGCGGGCGGTGCCAAGACCTCCAAGGGCTCCAGCAAGAAATGCGGCAAGCTCAAGGCCCCCGCGGCCGCGGGCGCCAAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 72 bp AGCTGCGACGGCTGCTGCCCCGGCGGCTGCAGGAGCTaGTGGTGCGGTGGTTCCTCGTCCTCCTCGTCCGGC +
Preference number: 6 (lower is better)
Translates to: SCDGCCPGGCRS*WCGGSSSSSSG
Trigger: GCCGGACGAGGAGGACGAGGAACCACCGCACCAGCAGCTCCTGCAGCCGCCGGGGCAGCAGCCGTCGCAGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 72 bp CGTCTCAGCAGCTGCGACGGCTGCTGCCCCGGCGGCTaGAGGAGCTGCTGGTGCGGTGGTTCCTCGTCCTCC +
Preference number: 6 (lower is better)
Translates to: RLSSCDGCCPGG*RSCWCGGSSSS
Trigger: GGAGGACGAGGAACCACCGCACCAGCAGCTCCTGCAGCCGCCGGGGCAGCAGCCGTCGCAGCTGCTGAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS TCA 72 bp GGTCGCTCTCGTCCAGGGCCACCGGGCTGCAAGCCATaGATTCGCCCTCCTCCGTGTCCAGCGCCTCCCGGG +
Preference number: 6 (lower is better)
Translates to: GRSRPGPPGCKP*IRPPPCPAPPG
Trigger: CCCGGGAGGCGCTGGACACGGAGGAGGGCGAATTCATGGCTTGCAGCCCGGTGGCCCTGGACGAGAGCGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 72 bp GGTCGAACATCAGGTCGTCGGCGTCCTCGCCGCTGCTaGCGCTGCTGCTGCCGCTGCTGCTGGACGAGGAGG +
Preference number: 6 (lower is better)
Translates to: GRTSGRRRPRRC*RCCCRCCWTRR
Trigger: CCTCCTCGTCCAGCAGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGAGGACGCCGACGACCTGATGTTCGACC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS CAA 72 bp GGGGCCTTGAGCTTGCCGCATTTCTTGCTGGAGCCCTaGGAGGTCTTGGCACCGCCCGCGCCTCCGCCCGCG +
Preference number: 6 (lower is better)
Translates to: GALSLPHFLLEP*EVLAPPAPPPA
Trigger: CGCGGGCGGAGGCGCGGGCGGTGCCAAGACCTCCAAGGGCTCCAGCAAGAAATGCGGCAAGCTCAAGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 72 bp GCTTCCAAGCTCTCCGCCTGCTGCACCATGATCCGCTaGAGGGCTGGACGCTCCAACCCGGGCCGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: ASKLSACCTMIR*RAGRSNPGRWV
Trigger: GACCCAGCGGCCCGGGTTGGAGCGTCCAGCCCTGCAGCGGATCATGGTGCAGCAGGCGGAGAGCTTGGAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 72 bp TCAGGTCGAACATCAGGTCGTCGGCGTCCTCGCCGCTaGTGCCGCTGCTGCTGCCGCTGCTGCTGGACGAGG +
Preference number: 6 (lower is better)
Translates to: SGRTSGRRRPRR*CRCCCRCCWTR
Trigger: CCTCGTCCAGCAGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGAGGACGCCGACGACCTGATGTTCGACCTGA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS CCA 72 bp CCGCTTGATGTGGCCCGACGCCGTCTTGCACCAGTCTaGGTCGCTCTCGTCCAGGGCCACCGGGCTGCAAGC +
Preference number: 6 (lower is better)
Translates to: PLDVARRRLAPV*VALVQGHRAAS
Trigger: GCTTGCAGCCCGGTGGCCCTGGACGAGAGCGACCCAGACTGGTGCAAGACGGCGTCGGGCCACATCAAGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS TCA 72 bp TGCTCTCCGCTTCCAAGCTCTCCGCCTGCTGCACCATaGTCCGCTGCAGGGCTGGACGCTCCAACCCGGGCC +
Preference number: 6 (lower is better)
Translates to: CSPLPSSPPAAP*SAAGLDAPTRA
Trigger: GGCCCGGGTTGGAGCGTCCAGCCCTGCAGCGGATCATGGTGCAGCAGGCGGAGAGCTTGGAAGCGGAGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS GCA 72 bp CGGGGCAGGTTGCTCTCCGCTTCCAAGCTCTCCGCCTaGTGCACCATGATCCGCTGCAGGGCTGGACGCTCC +
Preference number: 6 (lower is better)
Translates to: RGRLLSASKLSA*CTMIRCRAGRS
Trigger: GGAGCGTCCAGCCCTGCAGCGGATCATGGTGCAGCAGGCGGAGAGCTTGGAAGCGGAGAGCAACCTGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS TCA 72 bp GCGGTGGTTCCTCGTCCTCCTCGTCCGGCTCCTGTTTaGTCTGCAGCTGCAGCTCGTCGTCGTCGTCGTCGT +
Preference number: 6 (lower is better)
Translates to: AVVPRPPRPAPV*SAAAARRRRRR
Trigger: ACGACGACGACGACGACGAGCTGCAGCTGCAGATCAAACAGGAGCCGGACGAGGAGGACGAGGAACCACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS TCA 72 bp CGGGGAACTCGAAGTGGGAGCCCAGGCTGCCCTCGCTaGACGAATCCAAATCCTTATCCACCAGCGACAGGG +
Preference number: 6 (lower is better)
Translates to: RGTRSGSPGCPR*TNPNPYPPATG
Trigger: CCCTGTCGCTGGTGGATAAGGATTTGGATTCGTTCAGCGAGGGCAGCCTGGGCTCCCACTTCGAGTTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322002.5
CDS TCA 72 bp GAGAGAAAGAGCGAGCAGCGGGCGCCTTTCAATATGTaGACACCAGGTCGGAGAAGTTCGCCTCCAGCCAGT +
Preference number: 6 (lower is better)
Translates to: ERKSEQRAPFNM*TPGRRSSPPAS
Trigger: ACTGGCTGGAGGCGAACTTCTCCGACCTGGTGTTCACATATTGAAAGGCGCCCGCTGCTCGCTCTTTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322002.5