Pregenerated sensors for SOX1 (Homo sapiens)
Ensembl gene IDs: ENSG00000182968Ensembl transcript IDs: ENST00000330949.3
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGCTCCGGCGGTCGGCGCCGTCCGGAAGCAACGCGGAGGAAAGTaGGCGCGCCGGCCGGTATACAAAAGTGGGCTTCGCCTCTCGCCT | + |
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Preference number: 1 (lower is better) Translates to: WAPAVGAVRKQRGGK*ARRPVYKSGLRLSP Trigger: AGGCGAGAGGCGAAGCCCACTTTTGTATACCGGCCGGCGCGCTCACTTTCCTCCGCGTTGCTTCCGGACGGCGCCGACCGCCGGAGCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR CCA 90 bp | GGGAAACCCGTGACCTGCCCTGGTCTTTGTCCTTCATCCATGGCCTaGTCCAGGGTCCCACCACTGGGGTCTTCCCTTCCTCCTCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: GKPVTCPGLCPSSMA*SRVPPLGSSLPPPS Trigger: GGAGGGAGGAGGAAGGGAAGACCCCAGTGGTGGGACCCTGGACCAGGCCATGGATGAAGGACAAAGACCAGGGCAGGTCACGGGTTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR CCA 90 bp | CTGGTCTTTGTCCTTCATCCATGGCCTGGTCCAGGGTCCCACCACTaGGGTCTTCCCTTCCTCCTCCCTCCTCTGGACCAAACTGTGGCG | + |
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Preference number: 1 (lower is better) Translates to: LVFVLHPWPGPGSHH*GLPFLLPPLDQTVA Trigger: CGCCACAGTTTGGTCCAGAGGAGGGAGGAGGAAGGGAAGACCCCAGTGGTGGGACCCTGGACCAGGCCATGGATGAAGGACAAAGACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR CCA 90 bp | CTGCCTTACTACATTTATAACAAATGCGACGAGCTCCGCGTCACTTaGGCTCCGGCGGTCGGCGCCGTCCGGAAGCAACGCGGAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: LPYYIYNKCDELRVT*APAVGAVRKQRGGK Trigger: CTTTCCTCCGCGTTGCTTCCGGACGGCGCCGACCGCCGGAGCCCAAGTGACGCGGAGCTCGTCGCATTTGTTATAAATGTAGTAAGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR GCA 90 bp | AAAACTTGTAAGTGCTTGGACCTGCCTTACTACATTTATAACAAATaGGACGAGCTCCGCGTCACTTGGGCTCCGGCGGTCGGCGCCGTC | + |
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Preference number: 1 (lower is better) Translates to: KTCKCLDLPYYIYNK*DELRVTWAPAVGAV Trigger: GACGGCGCCGACCGCCGGAGCCCAAGTGACGCGGAGCTCGTCGCATTTGTTATAAATGTAGTAAGGCAGGTCCAAGCACTTACAAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR GCA 90 bp | TCTGCTCGAAATCTTAATTGCTGGGGAATTGGGAAACCCGTGACCTaGCCTGGTCTTTGTCCTTCATCCATGGCCTGGTCCAGGGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: SARNLNCWGIGKPVT*PGLCPSSMAWSRVP Trigger: TGGGACCCTGGACCAGGCCATGGATGAAGGACAAAGACCAGGGCAGGTCACGGGTTTCCCAATTCCCCAGCAATTAAGATTTCGAGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR GCA 90 bp | GACTGTGCACGAAGCACCTGCAATAAGATGCCAAACTGTAAAAGCTaGTTGCCTGGCGTCCCGGGCGCACTAACTCAGCTTTTCATAGTC | + |
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Preference number: 1 (lower is better) Translates to: DCARSTCNKMPNCKS*LPGVPGALTQLFIV Trigger: GACTATGAAAAGCTGAGTTAGTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCATCTTATTGCAGGTGCTTCGTGCACAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR GCA 90 bp | AGGAATAATGAACAAGGCATTTTGCGTTCACATCGGTTAGCAACTTaGATCCCAGTTCACGCGGGGGAGGGTGATGGTCGATATTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: RNNEQGILRSHRLAT*IPVHAGEGDGRYFC Trigger: ACAGAAATATCGACCATCACCCTCCCCCGCGTGAACTGGGATGCAAGTTGCTAACCGATGTGAACGCAAAATGCCTTGTTCATTATTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR TCA 90 bp | TCACTTTTGGACGGACAGTCCATACTCCAGGACAAGGAAGGGTGTTaGGAAAGCGAGGGGAAACCTAAGGCTGCTGAAATAAACGTATTT | + |
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Preference number: 1 (lower is better) Translates to: SLLDGQSILQDKEGC*ESEGKPKAAEINVF Trigger: AAATACGTTTATTTCAGCAGCCTTAGGTTTCCCCTCGCTTTCTCAACACCCTTCCTTGTCCTGGAGTATGGACTGTCCGTCCAAAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR CCA 90 bp | AACGCGGAGGAAAGTGAGCGCGCCGGCCGGTATACAAAAGTGGGCTTCGCCTCTTCCGGGGAAGGTGAGTaGGGGACACGCGTCACCCGG | + |
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Preference number: 2 (lower is better) Translates to: NAEESERAGRYTKVGFASSGEGE*GTRVTR Trigger: CCGGGTGACGCGTGTCCCCCACTCACCTTCCCCGGA...AGAGGCGAAGCCCACTTTTGTATACCGGCCGGCGCGCTCACTTTCCTCCGCGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR TCA 90 bp | CTTTGTCCTTCATCCATGGCCTGGTCCAGGGTCCCACCACTGGGGTCTTCCCTTGGTCTCCGGGGAAGGTaGGTGGGGGACACGCGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LCPSSMAWSRVPPLGSSLGLRGR*VGDTRH Trigger: GTGACGCGTGTCCCCCACTCACCTTCCCCGGAGACC...AAGGGAAGACCCCAGTGGTGGGACCCTGGACCAGGCCATGGATGAAGGACAAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR TCA 90 bp | CTTTGTCCTTCATCCATGGCCTGGTCCAGGGTCCCACCACTGGGGTCTTCCCTTCCCAGCCGTCCGCAGTaGAACAGCCGGAGCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LCPSSMAWSRVPPLGSSLPSRPQ*NSRSRR Trigger: TCTTCTGCTCCGGCTGTTTCACTGCGGACGGCTGGG...AAGGGAAGACCCCAGTGGTGGGACCCTGGACCAGGCCATGGATGAAGGACAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR GCA 90 bp | GTGAATACGATGAGTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGGAAGGCGCCCCGCTTaGAGCAAGGTAACGCGCAGC | + |
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Preference number: 2 (lower is better) Translates to: VNTMSVTLAKHRIHSRLRGRRPA*SKVTRS Trigger: GCTGCGCGTTACCTTGCTGCAAGCGGGGCGCCTTCC...CCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACACTCATCGTATTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCCTACTGTAATCCCCTCAAGGTCCCATTaGACCCTCAAGGTCCCGGTG | + |
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Preference number: 2 (lower is better) Translates to: VLPWPSTEFTVGSGPTVIPSRSH*TLKVPV Trigger: CACCGGGACCTTGAGGGTCCAATGGGACCTTGAGGG...GATTACAGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR GCA 90 bp | GTGAATACGATGAGTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGCGGAGGGGGCTCGGCTaGAGTACGTTTTGGTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: VNTMSVTLAKHRIHSRLRRRGLG*STFWFS Trigger: GCTGAACCAAAACGTACTGCAGCCGAGCCCCCTCCG...CCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACACTCATCGTATTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR CCA 90 bp | ATGCCAAACTGTAAAAGCTGCTTGCCTGGCGTCCCGGGCGCACTAACTCAGCTTTTTGTCCTTCATCCATaGCCTGGTCCAGGGTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: MPNCKSCLPGVPGALTQLFVLHP*PGPGSH Trigger: GTGGGACCCTGGACCAGGCCATGGATGAAGGACAAA...AAGCTGAGTTAGTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR TCA 90 bp | CGGAGGGGGCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAAGAATTGGGAAACCCGTaGCCTGCCCTGGTCTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: RRGLGCSTFWFSDCVSLKELGNP*PALVFV Trigger: GACAAAGACCAGGGCAGGTCACGGGTTTCCCAATTC...TTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGCCCCCTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR CAA 90 bp | TGTGCACGAAGCACCTGCAATAAGATGCCAAACTGTAAAAGCTGCTaGCCTGGCGTCCCGGGCGCACTAACTCAGCTTTTCATAGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: CARSTCNKMPNCKSC*PGVPGALTQLFIVC Trigger: ACAGACTATGAAAAGCTGAGTTAGTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCATCTTATTGCAGGTGCTTCGTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR TCA 90 bp | CGGAGGGGGCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAAACTATGTACATAATCTaGCTTCTCCTCCCCGCATTG | + |
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Preference number: 2 (lower is better) Translates to: RRGLGCSTFWFSDCVSLKTMYII*LLLPAL Trigger: CAATGCGGGGAGGAGAAGTCAGATTATGTACATAGT...TTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGCCCCCTCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR GCA 90 bp | ATGCCAAACTGTAAAAGCTGCTTGCCTGGCGTCCCGGGCGCACTAACTCAGCTTTACATTTATAACAAATaGGACGAGCTCCGCGTCACT | + |
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Preference number: 2 (lower is better) Translates to: MPNCKSCLPGVPGALTQLYIYNK*DELRVT Trigger: AGTGACGCGGAGCTCGTCGCATTTGTTATAAATGTA...AAGCTGAGTTAGTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR GCA 90 bp | CTTTGTCCTTCATCCATGGCCTGGTCCAGGGTCCCACCACTGGGGTCTTCCCTTGTAAGTGCTTGGACCTaGCTTACTACATTTATAACA | + |
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Preference number: 2 (lower is better) Translates to: LCPSSMAWSRVPPLGSSLVSAWT*LTTFIT Trigger: TGTTATAAATGTAGTAAGGCAGGTCCAAGCACTTAC...AAGGGAAGACCCCAGTGGTGGGACCCTGGACCAGGCCATGGATGAAGGACAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR GCA 90 bp | GTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCCTACTGTAATCGAGCCAAGACCTAGATaGCAACAATTGGACACAGAA | + |
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Preference number: 2 (lower is better) Translates to: VLPWPSTEFTVGSGPTVIEPRPR*QQLDTE Trigger: TTCTGTGTCCAATTGTTGGCATCTAGGTCTTGGCTC...GATTACAGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR TCA 90 bp | GTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCCTACTGTAATCTTTTCTCCACTAATTTaGATTGGAGCGACACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VLPWPSTEFTVGSGPTVIFSPLI*IGATLL Trigger: CAGCAGTGTCGCTCCAATTCAAATTAGTGGAGAAAA...GATTACAGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR CCA 90 bp | ATGCCAAACTGTAAAAGCTGCTTGCCTGGCGTCCCGGGCGCACTAACTCAGCTTAAACTTGTAAGTGCTTaGACCTGCCTTACTACATTT | + |
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Preference number: 2 (lower is better) Translates to: MPNCKSCLPGVPGALTQLKLVSA*TCLTTF Trigger: AAATGTAGTAAGGCAGGTCCAAGCACTTACAAGTTT...AAGCTGAGTTAGTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR CAA 90 bp | GGATGGACGGAGGGGGCTCGGCTGCAGTACGTTTTGGTTCAGCGATaGTGTTTCCTTGAAACACATTTAGATAAATTCTGCTCGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: GWTEGARLQYVLVQR*CFLETHLDKFCSKS Trigger: AGATTTCGAGCAGAATTTATCTAAATGTGTTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGCCCCCTCCGTCCATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR CAA 90 bp | ATCAAACAACCTCAAGATCTCGTCAGGAATAATGAACAAGGCATTTaGCGTTCACATCGGTTAGCAACTTGCATCCCAGTTCACGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: IKQPQDLVRNNEQGI*RSHRLATCIPVHAG Trigger: CCCCGCGTGAACTGGGATGCAAGTTGCTAACCGATGTGAACGCAAAATGCCTTGTTCATTATTCCTGACGAGATCTTGAGGTTGTTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR CAA 90 bp | GAGAGTGGACGTCAGTCAAAGAACCTCAGAGAGAGTCCTTTAAGTTaGTATATTTCAGAGAAAACCCTCAAGGTCCCATTGGACCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: ESGRQSKNLRESPLS*YISEKTLKVPLDPQ Trigger: TTGAGGGTCCAATGGGACCTTGAGGGTTTTCTCTGAAATATACAAACTTAAAGGACTCTCTCTGAGGTTCTTTGACTGACGTCCACTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR CAA 90 bp | TATCATCATATAGTATTTCACTCCGTGAATACGATGAGTGTTACCTaGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCCTACTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: YHHIVFHSVNTMSVT*AKHRIHSRLRAYCN Trigger: ATTACAGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACACTCATCGTATTCACGGAGTGAAATACTATATGATGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR CCA 90 bp | CTAAAGTGGGGCCCACATCCTAATCTTGAGCCAAGACCTAGATGCCAACAATTGCTTTTGACAAGAATGTaGGAACGTCTGTACAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: LKWGPHPNLEPRPRCQQLLLTRM*ERLYKS Trigger: GCTTTTGTACAGACGTTCCCACATTCTTGTCAAAAG...CAATTGTTGGCATCTAGGTCTTGGCTCAAGATTAGGATGTGGGCCCCACTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR TCA 90 bp | TACTTTTATTTCTCGGCCCGTATTAACACTCAGCTCTACAAAATAACCTATAGGTTGAAAAAGGTTCCTTaGAAAATCCTGTCCTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: YFYFSARINTQLYKITYRLKKVP*KILSSH Trigger: ATGGGAGGACAGGATTTTTCAAGGAACCTTTTTCAA...CCTATAGGTTATTTTGTAGAGCTGAGTGTTAATACGGGCCGAGAAATAAAAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR TCA 72 bp | TCAGCGCCCGGCGGTCGCCAGGGTCTCCGGGGAAGGTaGGTGGGGGACACGCGTCACCCGGCGTTCGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: SAPGGRQGLRGR*VGDTRHPAFVS Trigger: GGAGACGAACGCCGGGTGACGCGTGTCCCCCACTCACCTTCCCCGGAGACCCTGGCGACCGCCGGGCGCTGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR CAA 90 bp | GACCAAACTGTGGCGCAGACCCCCAGCCAGGTGGAAGGCGCCCCGCTTGCAGCACGAGCTCCGCGTCACTaGGGCTCCGGCGGTCGGCGC | + |
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Preference number: 3 (lower is better) Translates to: DQTVAQTPSQVEGAPLAARAPRH*GSGGRR Trigger: GCGCCGACCGCCGGAGCCCAAGTGACGCGGAGCTCG...TGCTGCAAGCGGGGCGCCTTCCACCTGGCTGGGGGTCTGCGCCACAGTTTGGTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR TCA 72 bp | GCGGTCGGCGCCGTCCGGAAGCAACGCGGAGGAAAGTaGGCGCGCCGGCCGGTATACAAAAGTGGGCTTCGC | + |
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Preference number: 3 (lower is better) Translates to: AVGAVRKQRGGK*ARRPVYKSGLR Trigger: GCGAAGCCCACTTTTGTATACCGGCCGGCGCGCTCACTTTCCTCCGCGTTGCTTCCGGACGGCGCCGACCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR CCA 72 bp | TACATTTATAACAAATGCGACGAGCTCCGCGTCACTTaGGCTCCGGCGGTCGGCGCCGTCCGGAAGCAACGC | + |
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Preference number: 3 (lower is better) Translates to: YIYNKCDELRVT*APAVGAVRKQR Trigger: GCGTTGCTTCCGGACGGCGCCGACCGCCGGAGCCCAAGTGACGCGGAGCTCGTCGCATTTGTTATAAATGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR CCA 72 bp | GTGACCTGCCCTGGTCTTTGTCCTTCATCCATGGCCTaGTCCAGGGTCCCACCACTGGGGTCTTCCCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: VTCPGLCPSSMA*SRVPPLGSSLP Trigger: AGGAAGGGAAGACCCCAGTGGTGGGACCCTGGACCAGGCCATGGATGAAGGACAAAGACCAGGGCAGGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR CCA 72 bp | CAAGAAAACACCGAAGTTCAGTCTAAAACCCAAGTCTaGTGTCAGCGCCCGGCGGTCGCCAGGGTCTCCGGG | + |
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Preference number: 3 (lower is better) Translates to: QENTEVQSKTQV*CQRPAVARVSG Trigger: CCCGGAGACCCTGGCGACCGCCGGGCGCTGACACCAGACTTGGGTTTTAGACTGAACTTCGGTGTTTTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR TCA 72 bp | CTCCAGGGTACACACAGGGGAGCACAGGGGCCAGACTaGGAGTGGACGTCAGTCAAAGAACCTCAGAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: LQGTHRGAQGPD*EWTSVKEPQRE Trigger: CTCTCTCTGAGGTTCTTTGACTGACGTCCACTCTCAGTCTGGCCCCTGTGCTCCCCTGTGTGTACCCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR CAA 90 bp | ATGCCAAACTGTAAAAGCTGCTTGCCTGGCGTCCCGGGCGCACTAACTCAGCTTACATCGGTTAGCAACTaGCATCCCAGTTCACGCGGG | + |
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Preference number: 3 (lower is better) Translates to: MPNCKSCLPGVPGALTQLTSVSN*HPSSRG Trigger: CCCGCGTGAACTGGGATGCAAGTTGCTAACCGATGT...AAGCTGAGTTAGTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR GCA 72 bp | AAGTGCTTGGACCTGCCTTACTACATTTATAACAAATaGGACGAGCTCCGCGTCACTTGGGCTCCGGCGGTC | + |
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Preference number: 3 (lower is better) Translates to: KCLDLPYYIYNK*DELRVTWAPAV Trigger: GACCGCCGGAGCCCAAGTGACGCGGAGCTCGTCGCATTTGTTATAAATGTAGTAAGGCAGGTCCAAGCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR GCA 72 bp | GAACAAGGCATTTTGCGTTCACATCGGTTAGCAACTTaGATCCCAGTTCACGCGGGGGAGGGTGATGGTCGA | + |
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Preference number: 3 (lower is better) Translates to: EQGILRSHRLAT*IPVHAGEGDGR Trigger: TCGACCATCACCCTCCCCCGCGTGAACTGGGATGCAAGTTGCTAACCGATGTGAACGCAAAATGCCTTGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR GCA 72 bp | CGAAGCACCTGCAATAAGATGCCAAACTGTAAAAGCTaGTTGCCTGGCGTCCCGGGCGCACTAACTCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: RSTCNKMPNCKS*LPGVPGALTQL Trigger: AAGCTGAGTTAGTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCATCTTATTGCAGGTGCTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR GCA 72 bp | AATCTTAATTGCTGGGGAATTGGGAAACCCGTGACCTaGCCTGGTCTTTGTCCTTCATCCATGGCCTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: NLNCWGIGKPVT*PGLCPSSMAWS Trigger: GGACCAGGCCATGGATGAAGGACAAAGACCAGGGCAGGTCACGGGTTTCCCAATTCCCCAGCAATTAAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR GCA 72 bp | TTTCAGCTGACTGTGCACGAAGCACCTGCAATAAGATaGCAAACTGTAAAAGCTGCTTGCCTGGCGTCCCGG | + |
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Preference number: 3 (lower is better) Translates to: FQLTVHEAPAIR*QTVKAACLASR Trigger: CCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCATCTTATTGCAGGTGCTTCGTGCACAGTCAGCTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR TCA 72 bp | CTCGAAATCTTAATTGCTGGGGAATTGGGAAACCCGTaGCCTGCCCTGGTCTTTGTCCTTCATCCATGGCCT | + |
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Preference number: 3 (lower is better) Translates to: LEILIAGELGNP*PALVFVLHPWP Trigger: AGGCCATGGATGAAGGACAAAGACCAGGGCAGGTCACGGGTTTCCCAATTCCCCAGCAATTAAGATTTCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR TCA 72 bp | GACGGACAGTCCATACTCCAGGACAAGGAAGGGTGTTaGGAAAGCGAGGGGAAACCTAAGGCTGCTGAAATA | + |
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Preference number: 3 (lower is better) Translates to: DGQSILQDKEGC*ESEGKPKAAEI Trigger: TATTTCAGCAGCCTTAGGTTTCCCCTCGCTTTCTCAACACCCTTCCTTGTCCTGGAGTATGGACTGTCCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR CAA 90 bp | GCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAACACATTTAGACCTGCCCTGGTCTTaGTCCTTCATCCATGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: ARLQYVLVQRLCFLETHLDLPWS*SFIHGL Trigger: CAGGCCATGGATGAAGGACAAAGACCAGGGCAGGTC...TAAATGTGTTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR GCA 72 bp | TGGGGCCCACATCCTAATCTTGAGCCAAGACCTAGATaGCAACAATTGGACACAGAAACTCCAGGGTACACA | + |
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Preference number: 3 (lower is better) Translates to: WGPHPNLEPRPR*QQLDTETPGYT Trigger: TGTGTACCCTGGAGTTTCTGTGTCCAATTGTTGGCATCTAGGTCTTGGCTCAAGATTAGGATGTGGGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR CAA 90 bp | CTAAAGTGGGGCCCACATCCTAATCTTGAGCCAAGACCTAGATGCCAACAATTGCGGCTGCAGTACGTTTaGGTTCAGCGATTGTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: LKWGPHPNLEPRPRCQQLRLQYV*VQRLCF Trigger: GAAACACAATCGCTGAACCAAAACGTACTGCAGCCG...CAATTGTTGGCATCTAGGTCTTGGCTCAAGATTAGGATGTGGGCCCCACTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR CCA 72 bp | ATTATAAAATTTCCCAAATCATCTCCCGGAGAGGACTaGGGAGGCCCTTATCCCGGACTAAGTCGTAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: IIKFPKSSPGED*GGPYPGLSRSG Trigger: ACCACTACGACTTAGTCCGGGATAAGGGCCTCCCCAGTCCTCTCCGGGAGATGATTTGGGAAATTTTATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR CAA 90 bp | CGGAGGGGGCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAATCCAGTATTTTCCTTTaGACAAGAATGTGGGAACGT | + |
|
Preference number: 3 (lower is better) Translates to: RRGLGCSTFWFSDCVSLKSSIFL*TRMWER Trigger: ACGTTCCCACATTCTTGTCAAAAGGAAAATACTGGA...TTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGCCCCCTCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR-3UTR CAA 90 bp | GTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCCTACTGTAATCATTGAAAAAGGTTCCTaGAAAAATCCTGTCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VLPWPSTEFTVGSGPTVIIEKGS*KNPVLP Trigger: TGGGAGGACAGGATTTTTCAAGGAACCTTTTTCAAT...GATTACAGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR TCA 72 bp | AACCCTCAAGGTCCCATTGGACCCTCAAGGTCCCGGTaGGTTAACAGAACAAGCATTATAAAATTTCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NPQGPIGPSRSR*VNRTSIIKFPK Trigger: TTTGGGAAATTTTATAATGCTTGTTCTGTTAACTCACCGGGACCTTGAGGGTCCAATGGGACCTTGAGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| 3UTR GCA 72 bp | TGTCAGATCAGCATTATACTTAAAGCTATTCTCGAATaGAGGCTGAATTCGGTTCTCATTAAACTTATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CQISIILKAILE*RLNSVLIKLIA Trigger: TGCTATAAGTTTAATGAGAACCGAATTCAGCCTGCATTCGAGAATAGCTTTAAGTATAATGCTGATCTGACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | GACGAGCTCCGCGTCACTTGGGCTCCGGCGGTCGGCGCCGTCCGGAAGCAACGCGAGCTCCGCGTCACTTaGGCTCCGGCGGTCGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DELRVTWAPAVGAVRKQRELRVT*APAVGA Trigger: GGCGCCGACCGCCGGAGCCCAAGTGACGCGGAGCTC...GCGTTGCTTCCGGACGGCGCCGACCGCCGGAGCCCAAGTGACGCGGAGCTCGTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | GACGAGCTCCGCGTCACTTGGGCTCCGGCGGTCGGCGCCGTCCGGAAGCAACGCGTACATCGGGGCGGCTaGCGGGTTCACCGGCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: DELRVTWAPAVGAVRKQRVHRGG*RVHRHR Trigger: GCGGTGCCGGTGAACCCGCCAGCCGCCCCGATGTAC...GCGTTGCTTCCGGACGGCGCCGACCGCCGGAGCCCAAGTGACGCGGAGCTCGTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR GCA 90 bp | GACCAAACTGTGGCGCAGACCCCCAGCCAGGTGGAAGGCGCCCCGCTTGCAGCACTCGCCGGCCGCCGCTaGGCGCTGTCTCCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DQTVAQTPSQVEGAPLAALAGRR*ALSPSS Trigger: GGAGGAAGGAGACAGCGCGCAGCGGCGGCCGGCGAG...TGCTGCAAGCGGGGCGCCTTCCACCTGGCTGGGGGTCTGCGCCACAGTTTGGTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR GCA 90 bp | AGGGTCTCCGGGGAAGGTGAGTGGGGGACACGCGTCACCCGGCGTTCGTCTCCAGAATTGGAGCGACACTaGTGGGGGCGGGGAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVSGEGEWGTRVTRRSSPELERH*WGRGRG Trigger: CCCCCTTCCCCGCCCCCAGCAGTGTCGCTCCAATTC...TGGAGACGAACGCCGGGTGACGCGTGTCCCCCACTCACCTTCCCCGGAGACCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | GACGAGCTCCGCGTCACTTGGGCTCCGGCGGTCGGCGCCGTCCGGAAGCAACGCTCTAAAACCCAAGTCTaGTGTCAGCGCCCGGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DELRVTWAPAVGAVRKQRSKTQV*CQRPAV Trigger: GACCGCCGGGCGCTGACACCAGACTTGGGTTTTAGA...GCGTTGCTTCCGGACGGCGCCGACCGCCGGAGCCCAAGTGACGCGGAGCTCGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCCTCTGGACCAAACTGTGGCGCAGACCCCCAGCCAGGTGGAAGGCGCTCTCCCGGAGAGGACTaGGGAGGCCCTTATCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPSSGPNCGADPQPGGRRSPGED*GGPYPG Trigger: TCCGGGATAAGGGCCTCCCCAGTCCTCTCCGGGAGA...GCGCCTTCCACCTGGCTGGGGGTCTGCGCCACAGTTTGGTCCAGAGGAGGGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | AACGCGGAGGAAAGTGAGCGCGCCGGCCGGTATACAAAAGTGGGCTTCGCCTCTCGGGCGGGCTGCCGCTaGGCTCCGACTTCACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NAEESERAGRYTKVGFASRAGCR*APTSPE Trigger: CTCTGGTGAAGTCGGAGCCCAGCGGCAGCCCGCCCG...AGAGGCGAAGCCCACTTTTGTATACCGGCCGGCGCGCTCACTTTCCTCCGCGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCCTCTGGACCAAACTGTGGCGCAGACCCCCAGCCAGGTGGAAGGCGCCCTTCATCCATGGCCTaGTCCAGGGTCCCACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PPSSGPNCGADPQPGGRRPSSMA*SRVPPL Trigger: CAGTGGTGGGACCCTGGACCAGGCCATGGATGAAGG...GCGCCTTCCACCTGGCTGGGGGTCTGCGCCACAGTTTGGTCCAGAGGAGGGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR TCA 90 bp | CTGCCCTGGTCTTTGTCCTTCATCCATGGCCTGGTCCAGGGTCCCACCACTGGGTCTCGGCCTCGGACATaGCCTTCCACTCGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPWSLSFIHGLVQGPTTGSRPRT*PSTRPP Trigger: TGGGGGCCGAGTGGAAGGTCATGTCCGAGGCCGAGA...CCCAGTGGTGGGACCCTGGACCAGGCCATGGATGAAGGACAAAGACCAGGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR TCA 90 bp | AGGGTCTCCGGGGAAGGTGAGTGGGGGACACGCGTCACCCGGCGTTCGTCTCCAGCACAGGGGCCAGACTaGGAGTGGACGTCAGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RVSGEGEWGTRVTRRSSPAQGPD*EWTSVK Trigger: TTTGACTGACGTCCACTCTCAGTCTGGCCCCTGTGC...TGGAGACGAACGCCGGGTGACGCGTGTCCCCCACTCACCTTCCCCGGAGACCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR GCA 90 bp | TCCCAAATCATCTCCCGGAGAGGACTGGGGAGGCCCTTATCCCGGACTAAGTCGATGGGCTGCGGGTTGTaGGGGTGCGCGTGCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQIISRRGLGRPLSRTKSMGCGL*GCACGW Trigger: CCACCCGCACGCGCACCCGCACAACCCGCAGCCCAT...CGACTTAGTCCGGGATAAGGGCCTCCCCAGTCCTCTCCGGGAGATGATTTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCCTCTGGACCAAACTGTGGCGCAGACCCCCAGCCAGGTGGAAGGCGCGCCGGTATACAAAAGTaGGCTTCGCCTCTCGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PPSSGPNCGADPQPGGRRAGIQK*ASPLAS Trigger: CGAGGCGAGAGGCGAAGCCCACTTTTGTATACCGGC...GCGCCTTCCACCTGGCTGGGGGTCTGCGCCACAGTTTGGTCCAGAGGAGGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | GACGAGCTCCGCGTCACTTGGGCTCCGGCGGTCGGCGCCGTCCGGAAGCAACGCTCCACTAATTTGAATTaGAGCGACACTGCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DELRVTWAPAVGAVRKQRSTNLN*SDTAGG Trigger: GCCCCCAGCAGTGTCGCTCCAATTCAAATTAGTGGA...GCGTTGCTTCCGGACGGCGCCGACCGCCGGAGCCCAAGTGACGCGGAGCTCGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR TCA 90 bp | AACGCGGAGGAAAGTGAGCGCGCCGGCCGGTATACAAAAGTGGGCTTCGCCTCTCAACGCGGAGGAAAGTaGGCGCGCCGGCCGGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: NAEESERAGRYTKVGFASQRGGK*ARRPVY Trigger: GTATACCGGCCGGCGCGCTCACTTTCCTCCGCGTTG...AGAGGCGAAGCCCACTTTTGTATACCGGCCGGCGCGCTCACTTTCCTCCGCGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCCTCTGGACCAAACTGTGGCGCAGACCCCCAGCCAGGTGGAAGGCGCTGTAGCCCTGCGAGTTaGAGATGGGGCTGTACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPSSGPNCGADPQPGGRRCSPAS*RWGCTA Trigger: TGCAGTACAGCCCCATCTCCAACTCGCAGGGCTACA...GCGCCTTCCACCTGGCTGGGGGTCTGCGCCACAGTTTGGTCCAGAGGAGGGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCCTCTGGACCAAACTGTGGCGCAGACCCCCAGCCAGGTGGAAGGCGCGGTTCGGCTCGCAGGTaGAAAGTTTCTCCTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPSSGPNCGADPQPGGRRGSARR*KVSPDA Trigger: TGCATCAGGAGAAACTTTCCACCTGCGAGCCGAACC...GCGCCTTCCACCTGGCTGGGGGTCTGCGCCACAGTTTGGTCCAGAGGAGGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | AACGCGGAGGAAAGTGAGCGCGCCGGCCGGTATACAAAAGTGGGCTTCGCCTCTCCAGGGTCCCACCACTaGGGTCTTCCCTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NAEESERAGRYTKVGFASPGSHH*GLPFLL Trigger: GAGGAGGAAGGGAAGACCCCAGTGGTGGGACCCTGG...AGAGGCGAAGCCCACTTTTGTATACCGGCCGGCGCGCTCACTTTCCTCCGCGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCCTCTGGACCAAACTGTGGCGCAGACCCCCAGCCAGGTGGAAGGCGCGGTGGTTGGAGCACCTaGCATTGGCTATTTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPSSGPNCGADPQPGGRRGGWST*HWLFQL Trigger: CAGCTGAAATAGCCAATGCCAGGTGCTCCAACCACC...GCGCCTTCCACCTGGCTGGGGGTCTGCGCCACAGTTTGGTCCAGAGGAGGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR TCA 90 bp | ATGCCAAACTGTAAAAGCTGCTTGCCTGGCGTCCCGGGCGCACTAACTCAGCTTGGTCTCCGGGGAAGGTaGGTGGGGGACACGCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MPNCKSCLPGVPGALTQLGLRGR*VGDTRH Trigger: GTGACGCGTGTCCCCCACTCACCTTCCCCGGAGACC...AAGCTGAGTTAGTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR GCA 90 bp | GTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCCTACTGTAATCGCGCCGCCGGGCGAGTaGAGGTCGGTCTCCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: VLPWPSTEFTVGSGPTVIAPPGE*RSVSII Trigger: GATGATGGAGACCGACCTGCACTCGCCCGGCGGCGC...GATTACAGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | ATGCCAAACTGTAAAAGCTGCTTGCCTGGCGTCCCGGGCGCACTAACTCAGCTTTTGCAGCTCCGCTTTTaGGGCCGGGAGCGGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MPNCKSCLPGVPGALTQLLQLRF*GRERCA Trigger: AGCGCACCGCTCCCGGCCCCAAAAGCGGAGCTGCAA...AAGCTGAGTTAGTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | CGGAGGGGGCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAATCCGGGGAAGGTGAGTaGGGGACACGCGTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RRGLGCSTFWFSDCVSLKSGEGE*GTRVTR Trigger: CCGGGTGACGCGTGTCCCCCACTCACCTTCCCCGGA...TTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGCCCCCTCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | AGGGTCTCCGGGGAAGGTGAGTGGGGGACACGCGTCACCCGGCGTTCGTCTCCAGGCTGCAGTACGTTTTaGTTCAGCGATTGTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVSGEGEWGTRVTRRSSPGCSTF*FSDCVS Trigger: GGAAACACAATCGCTGAACCAAAACGTACTGCAGCC...TGGAGACGAACGCCGGGTGACGCGTGTCCCCCACTCACCTTCCCCGGAGACCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR TCA 90 bp | CTAAAGTGGGGCCCACATCCTAATCTTGAGCCAAGACCTAGATGCCAACAATTGCGTTGGCCCAGCCGTTaGCGTGCGCGTAGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LKWGPHPNLEPRPRCQQLRWPSR*RARSRR Trigger: GCGGCGGCTACGCGCACGTCAACGGCTGGGCCAACG...CAATTGTTGGCATCTAGGTCTTGGCTCAAGATTAGGATGTGGGCCCCACTTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR GCA 90 bp | GTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCCTACTGTAATCCCCTCGGCGGAGCGGTaGAAACAGGTGCAGTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLPWPSTEFTVGSGPTVIPSAER*KQVQSW Trigger: CCACGACTGCACCTGTTTGCACCGCTCCGCCGAGGG...GATTACAGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | GTGAATACGATGAGTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGCGTTTGACCCGGTCCTaGTTGGCCTTGGCGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VNTMSVTLAKHRIHSRLRRLTRS*LALAPP Trigger: CGGGGGCGCCAAGGCCAACCAGGACCGGGTCAAACG...CCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACACTCATCGTATTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CCA 90 bp | CTGCCCTGGTCTTTGTCCTTCATCCATGGCCTGGTCCAGGGTCCCACCACTGGGACCCGTGACCTGCCCTaGTCTTTGTCCTTCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPWSLSFIHGLVQGPTTGTRDLP*SLSFIH Trigger: ATGGATGAAGGACAAAGACCAGGGCAGGTCACGGGT...CCCAGTGGTGGGACCCTGGACCAGGCCATGGATGAAGGACAAAGACCAGGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR TCA 90 bp | GTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCCTACTGTAATCCCCAGCCGTCCGCAGTaGAACAGCCGGAGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLPWPSTEFTVGSGPTVIPSRPQ*NSRSRR Trigger: TCTTCTGCTCCGGCTGTTTCACTGCGGACGGCTGGG...GATTACAGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR GCA 90 bp | TCCCAAATCATCTCCCGGAGAGGACTGGGGAGGCCCTTATCCCGGACTAAGTCGAGCGGTGCAAACAGGTaGAGTCGTGGCCAAGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQIISRRGLGRPLSRTKSSGANR*SRGQVA Trigger: TGCAACTTGGCCACGACTGCACCTGTTTGCACCGCT...CGACTTAGTCCGGGATAAGGGCCTCCCCAGTCCTCTCCGGGAGATGATTTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR TCA 90 bp | CTGCCCTGGTCTTTGTCCTTCATCCATGGCCTGGTCCAGGGTCCCACCACTGGGGTGGAAAGTTTCTCCTaGTGCACAAACCACTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPWSLSFIHGLVQGPTTGVESFS*CTNHLP Trigger: TGGCAAGTGGTTTGTGCATCAGGAGAAACTTTCCAC...CCCAGTGGTGGGACCCTGGACCAGGCCATGGATGAAGGACAAAGACCAGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR TCA 90 bp | GTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCCTACTGTAATCTATAACTCCGCCGTCTaGAGGAGGGGGTGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLPWPSTEFTVGSGPTVIYNSAV*RRGWWW Trigger: CCACCACCACCCCCTCCTTCAGACGGCGGAGTTATA...GATTACAGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR GCA 90 bp | GTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCCTACTGTAATCCAGTCGTGGCCAAGTTaGAGCTCCGCTTTTGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLPWPSTEFTVGSGPTVIQSWPS*SSAFGA Trigger: GGCCCCAAAAGCGGAGCTGCAACTTGGCCACGACTG...GATTACAGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR GCA 90 bp | CGGAGGGGGCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAACGGAGGGGGCTCGGCTaGAGTACGTTTTGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRGLGCSTFWFSDCVSLKRRGLG*STFWFS Trigger: GCTGAACCAAAACGTACTGCAGCCGAGCCCCCTCCG...TTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGCCCCCTCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR GCA 90 bp | AAGAAAACACCGAAGTTCAGTCTAAAACCCAAGTCTGGTGTCAGCGCCCGGCGGACTGTAAAAGCTGCTTaGCTGGCGTCCCGGGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KKTPKFSLKPKSGVSARRTVKAA*LASRAH Trigger: GTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGT...CCGCCGGGCGCTGACACCAGACTTGGGTTTTAGACTGAACTTCGGTGTTTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR GCA 90 bp | ATGCCAAACTGTAAAAGCTGCTTGCCTGGCGTCCCGGGCGCACTAACTCAGCTTCCAAACTGTAAAAGCTaGTTGCCTGGCGTCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MPNCKSCLPGVPGALTQLPNCKS*LPGVPG Trigger: GCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGG...AAGCTGAGTTAGTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | GTGAATACGATGAGTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGCCTGCGAGTTGGAGATaGGGCTGTACTGCAGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VNTMSVTLAKHRIHSRLRPASWR*GCTAAR Trigger: GCGCGCTGCAGTACAGCCCCATCTCCAACTCGCAGG...CCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACACTCATCGTATTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR TCA 90 bp | AATTGGGAAACCCGTGACCTGCCCTGGTCTTTGTCCTTCATCCATGGCCTGGTCGAATTGGGAAACCCGTaGCCTGCCCTGGTCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NWETRDLPWSLSFIHGLVELGNP*PALVFV Trigger: GACAAAGACCAGGGCAGGTCACGGGTTTCCCAATTC...GACCAGGCCATGGATGAAGGACAAAGACCAGGGCAGGTCACGGGTTTCCCAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR TCA 90 bp | TCCCAAATCATCTCCCGGAGAGGACTGGGGAGGCCCTTATCCCGGACTAAGTCGATTGGCTATTTCAGCTaGCTGTGCACGAAGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQIISRRGLGRPLSRTKSIGYFS*LCTKHL Trigger: CAGGTGCTTCGTGCACAGTCAGCTGAAATAGCCAAT...CGACTTAGTCCGGGATAAGGGCCTCCCCAGTCCTCTCCGGGAGATGATTTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | GTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCCTACTGTAATCTTTGTCCTTCATCCATaGCCTGGTCCAGGGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLPWPSTEFTVGSGPTVIFVLHP*PGPGSH Trigger: GTGGGACCCTGGACCAGGCCATGGATGAAGGACAAA...GATTACAGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR GCA 90 bp | AACGCGGAGGAAAGTGAGCGCGCCGGCCGGTATACAAAAGTGGGCTTCGCCTCTAAAGCTATTCTCGAATaGAGGCTGAATTCGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NAEESERAGRYTKVGFASKAILE*RLNSVL Trigger: GAGAACCGAATTCAGCCTGCATTCGAGAATAGCTTT...AGAGGCGAAGCCCACTTTTGTATACCGGCCGGCGCGCTCACTTTCCTCCGCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| 3UTR CAA 72 bp | AGCACCTGCAATAAGATGCCAAACTGTAAAAGCTGCTaGCCTGGCGTCCCGGGCGCACTAACTCAGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: STCNKMPNCKSC*PGVPGALTQLF Trigger: GAAAAGCTGAGTTAGTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCATCTTATTGCAGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR GCA 90 bp | TACTTTTATTTCTCGGCCCGTATTAACACTCAGCTCTACAAAATAACCTATAGGGCCAGCTGCGCCTCCTaGATCATGGCCGCGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: YFYFSARINTQLYKITYRASCAS*IMAAAA Trigger: GGCGGCCGCGGCCATGATGCAGGAGGCGCAGCTGGC...CCTATAGGTTATTTTGTAGAGCTGAGTGTTAATACGGGCCGAGAAATAAAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | AATTGGGAAACCCGTGACCTGCCCTGGTCTTTGTCCTTCATCCATGGCCTGGTCTCTGTGCCTCTAAAGTaGGGCCCACATCCTAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NWETRDLPWSLSFIHGLVSVPLK*GPHPNL Trigger: AAGATTAGGATGTGGGCCCCACTTTAGAGGCACAGA...GACCAGGCCATGGATGAAGGACAAAGACCAGGGCAGGTCACGGGTTTCCCAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | CGGAGGGGGCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAATGGAGCACCTGGCATTaGCTATTTCAGCTGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRGLGCSTFWFSDCVSLKWSTWH*LFQLTV Trigger: CACAGTCAGCTGAAATAGCCAATGCCAGGTGCTCCA...TTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGCCCCCTCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR GCA 90 bp | AATTGGGAAACCCGTGACCTGCCCTGGTCTTTGTCCTTCATCCATGGCCTGGTCGAGCCAAGACCTAGATaGCAACAATTGGACACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NWETRDLPWSLSFIHGLVEPRPR*QQLDTE Trigger: TTCTGTGTCCAATTGTTGGCATCTAGGTCTTGGCTC...GACCAGGCCATGGATGAAGGACAAAGACCAGGGCAGGTCACGGGTTTCCCAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR GCA 90 bp | AATTGGGAAACCCGTGACCTGCCCTGGTCTTTGTCCTTCATCCATGGCCTGGTCTGTGCACGAAGCACCTaGAATAAGATGCCAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NWETRDLPWSLSFIHGLVCARST*NKMPNC Trigger: ACAGTTTGGCATCTTATTGCAGGTGCTTCGTGCACA...GACCAGGCCATGGATGAAGGACAAAGACCAGGGCAGGTCACGGGTTTCCCAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | AACGCGGAGGAAAGTGAGCGCGCCGGCCGGTATACAAAAGTGGGCTTCGCCTCTAAACTTGTAAGTGCTTaGACCTGCCTTACTACATTT | + |
|
Preference number: 4 (lower is better) Translates to: NAEESERAGRYTKVGFASKLVSA*TCLTTF Trigger: AAATGTAGTAAGGCAGGTCCAAGCACTTACAAGTTT...AGAGGCGAAGCCCACTTTTGTATACCGGCCGGCGCGCTCACTTTCCTCCGCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | GCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAACACATTTACCCTCAAGGTCCCATTaGACCCTCAAGGTCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARLQYVLVQRLCFLETHLPSRSH*TLKVPV Trigger: CACCGGGACCTTGAGGGTCCAATGGGACCTTGAGGG...TAAATGTGTTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR TCA 90 bp | ATGCCAAACTGTAAAAGCTGCTTGCCTGGCGTCCCGGGCGCACTAACTCAGCTTTTCTCGAATGCAGGCTaGATTCGGTTCTCATTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: MPNCKSCLPGVPGALTQLFSNAG*IRFSLN Trigger: GTTTAATGAGAACCGAATTCAGCCTGCATTCGAGAA...AAGCTGAGTTAGTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR GCA 90 bp | GAAACAGCCGGAGCAGAAGATACTTTTATTTCTCGGCCCGTATTAACACTCAGCGATGCACAAACCACTTaGCAAAGAGGCCGACGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ETAGAEDTFISRPVLTLSDAQTT*QRGRRS Trigger: CGACCGTCGGCCTCTTTGGCAAGTGGTTTGTGCATC...GCTGAGTGTTAATACGGGCCGAGAAATAAAAGTATCTTCTGCTCCGGCTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR GCA 90 bp | GAAACAGCCGGAGCAGAAGATACTTTTATTTCTCGGCCCGTATTAACACTCAGCCATCGGTTAGCAACTTaGATCCCAGTTCACGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ETAGAEDTFISRPVLTLSHRLAT*IPVHAG Trigger: CCCCGCGTGAACTGGGATGCAAGTTGCTAACCGATG...GCTGAGTGTTAATACGGGCCGAGAAATAAAAGTATCTTCTGCTCCGGCTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | TACTTTTATTTCTCGGCCCGTATTAACACTCAGCTCTACAAAATAACCTATAGGCGCGAGGAGAGGGCCTaGAGCATAGACGGCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YFYFSARINTQLYKITYRREERA*SIDGRG Trigger: ACCCCGGCCGTCTATGCTCCAGGCCCTCTCCTCGCG...CCTATAGGTTATTTTGTAGAGCTGAGTGTTAATACGGGCCGAGAAATAAAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | CGATATTTCTGTGTGTGTGAGAATCCAGCACAATTATTTTGCCCGTTTTCCCAACTCTGGACCAAACTGTaGCGCAGACCCCCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RYFCVCENPAQLFCPFSQLWTKL*RRPPAR Trigger: CCTGGCTGGGGGTCTGCGCCACAGTTTGGTCCAGAG...TTGGGAAAACGGGCAAAATAATTGTGCTGGATTCTCACACACACAGAAATATCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| 3UTR CAA 72 bp | ACGCGTCACCCGGCGTTCGTCTCCAGTATTTTCCTTTaGACAAGAATGTGGGAACGTCTGTACAAAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRHPAFVSSIFL*TRMWERLYKSH Trigger: GTGGCTTTTGTACAGACGTTCCCACATTCTTGTCAAAAGGAAAATACTGGAGACGAACGCCGGGTGACGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| 3UTR CAA 72 bp | AGAGGATGGACGGAGGGGGCTCGGCTGCAGTACGTTTaGGTTCAGCGATTGTGTTTCCTTGAAACACATTTA | + |
|
Preference number: 4 (lower is better) Translates to: RGWTEGARLQYV*VQRLCFLETHL Trigger: TAAATGTGTTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGCCCCCTCCGTCCATCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| 3UTR CAA 72 bp | CAAAACAAGGAAATAAGGTGGTTGGAGCACCTGGCATaGGCTATTTCAGCTGACTGTGCACGAAGCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QNKEIRWLEHLA*AISADCARSTC Trigger: GCAGGTGCTTCGTGCACAGTCAGCTGAAATAGCCAATGCCAGGTGCTCCAACCACCTTATTTCCTTGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| 3UTR CAA 72 bp | ATAGTATTTCACTCCGTGAATACGATGAGTGTTACCTaGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVFHSVNTMSVT*AKHRIHSRLRA Trigger: GGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACACTCATCGTATTCACGGAGTGAAATACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR TCA 90 bp | CGGAGGGGGCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAATTTTCTCCACTAATTTaGATTGGAGCGACACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRGLGCSTFWFSDCVSLKFSPLI*IGATLL Trigger: CAGCAGTGTCGCTCCAATTCAAATTAGTGGAGAAAA...TTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGCCCCCTCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR GCA 90 bp | TACTTTTATTTCTCGGCCCGTATTAACACTCAGCTCTACAAAATAACCTATAGGGGAAGGCGCCCCGCTTaGAGCAAGGTAACGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YFYFSARINTQLYKITYRGRRPA*SKVTRS Trigger: GCTGCGCGTTACCTTGCTGCAAGCGGGGCGCCTTCC...CCTATAGGTTATTTTGTAGAGCTGAGTGTTAATACGGGCCGAGAAATAAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR GCA 90 bp | CGGAGGGGGCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAAGCACCTGCAATAAGATaGCAAACTGTAAAAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRGLGCSTFWFSDCVSLKAPAIR*QTVKAA Trigger: AGCAGCTTTTACAGTTTGGCATCTTATTGCAGGTGC...TTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGCCCCCTCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | GCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAACACATTTAAAACAGGTGCAGTCGTaGCCAAGTTGCAGCTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARLQYVLVQRLCFLETHLKQVQS*PSCSSA Trigger: AGCGGAGCTGCAACTTGGCCACGACTGCACCTGTTT...TAAATGTGTTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR TCA 90 bp | GTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCCTACTGTAATCTTGAAAAAGGTTCCTTaGAAAATCCTGTCCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLPWPSTEFTVGSGPTVILKKVP*KILSSH Trigger: ATGGGAGGACAGGATTTTTCAAGGAACCTTTTTCAA...GATTACAGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | TACTTTTATTTCTCGGCCCGTATTAACACTCAGCTCTACAAAATAACCTATAGGTGTCGTAGCGGTGCATaGGCTGCGGGTTGTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YFYFSARINTQLYKITYRCRSGA*AAGCAG Trigger: ACCCGCACAACCCGCAGCCCATGCACCGCTACGACA...CCTATAGGTTATTTTGTAGAGCTGAGTGTTAATACGGGCCGAGAAATAAAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | AAGAAAACACCGAAGTTCAGTCTAAAACCCAAGTCTGGTGTCAGCGCCCGGCGGCTTTTGACAAGAATGTaGGAACGTCTGTACAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KKTPKFSLKPKSGVSARRLLTRM*ERLYKS Trigger: GCTTTTGTACAGACGTTCCCACATTCTTGTCAAAAG...CCGCCGGGCGCTGACACCAGACTTGGGTTTTAGACTGAACTTCGGTGTTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | CGATATTTCTGTGTGTGTGAGAATCCAGCACAATTATTTTGCCCGTTTTCCCAAGTGCTCAGCCATCCATaGGCGCACAGACTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RYFCVCENPAQLFCPFSQVLSHP*AHRLFQ Trigger: CTGGAAGAGTCTGTGCGCCCATGGATGGCTGAGCAC...TTGGGAAAACGGGCAAAATAATTGTGCTGGATTCTCACACACACAGAAATATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR TCA 90 bp | CTAAAGTGGGGCCCACATCCTAATCTTGAGCCAAGACCTAGATGCCAACAATTGACTATGTACATAATCTaGCTTCTCCTCCCCGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LKWGPHPNLEPRPRCQQLTMYII*LLLPAL Trigger: CAATGCGGGGAGGAGAAGTCAGATTATGTACATAGT...CAATTGTTGGCATCTAGGTCTTGGCTCAAGATTAGGATGTGGGCCCCACTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR GCA 90 bp | CGATATTTCTGTGTGTGTGAGAATCCAGCACAATTATTTTGCCCGTTTTCCCAAGGGAAACCCGTGACCTaGCCTGGTCTTTGTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RYFCVCENPAQLFCPFSQGKPVT*PGLCPS Trigger: TGAAGGACAAAGACCAGGGCAGGTCACGGGTTTCCC...TTGGGAAAACGGGCAAAATAATTGTGCTGGATTCTCACACACACAGAAATATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR GCA 90 bp | TACTTTTATTTCTCGGCCCGTATTAACACTCAGCTCTACAAAATAACCTATAGGCGGTCTCCATCATCATaGTGTACATCGGGGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YFYFSARINTQLYKITYRRSPSS*CTSGRL Trigger: CAGCCGCCCCGATGTACAGCATGATGATGGAGACCG...CCTATAGGTTATTTTGTAGAGCTGAGTGTTAATACGGGCCGAGAAATAAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR GCA 90 bp | GTGAATACGATGAGTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGTAAGTGCTTGGACCTaGCTTACTACATTTATAACA | + |
|
Preference number: 4 (lower is better) Translates to: VNTMSVTLAKHRIHSRLRVSAWT*LTTFIT Trigger: TGTTATAAATGTAGTAAGGCAGGTCCAAGCACTTAC...CCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACACTCATCGTATTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | GAAACAGCCGGAGCAGAAGATACTTTTATTTCTCGGCCCGTATTAACACTCAGCAACAAGGAAATAAGGTaGTTGGAGCACCTGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ETAGAEDTFISRPVLTLSNKEIR*LEHLAL Trigger: CAATGCCAGGTGCTCCAACCACCTTATTTCCTTGTT...GCTGAGTGTTAATACGGGCCGAGAAATAAAAGTATCTTCTGCTCCGGCTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR TCA 90 bp | TACTTTTATTTCTCGGCCCGTATTAACACTCAGCTCTACAAAATAACCTATAGGTCACGCGGGGGAGGGTaGTGGTCGATATTTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YFYFSARINTQLYKITYRSRGGG*WSIFLC Trigger: ACACAGAAATATCGACCATCACCCTCCCCCGCGTGA...CCTATAGGTTATTTTGTAGAGCTGAGTGTTAATACGGGCCGAGAAATAAAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR GCA 90 bp | GCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAACACATTTAGCTCGAAATCTTAATTaGTGGGGAATTGGGAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: ARLQYVLVQRLCFLETHLARNLN*WGIGKP Trigger: GGGTTTCCCAATTCCCCAGCAATTAAGATTTCGAGC...TAAATGTGTTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| 3UTR CAA 72 bp | CCTCAAGATCTCGTCAGGAATAATGAACAAGGCATTTaGCGTTCACATCGGTTAGCAACTTGCATCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PQDLVRNNEQGI*RSHRLATCIPV Trigger: AACTGGGATGCAAGTTGCTAACCGATGTGAACGCAAAATGCCTTGTTCATTATTCCTGACGAGATCTTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR TCA 90 bp | TACTTTTATTTCTCGGCCCGTATTAACACTCAGCTCTACAAAATAACCTATAGGGACAAGGAAGGGTGTTaGGAAAGCGAGGGGAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: YFYFSARINTQLYKITYRDKEGC*ESEGKP Trigger: AGGTTTCCCCTCGCTTTCTCAACACCCTTCCTTGTC...CCTATAGGTTATTTTGTAGAGCTGAGTGTTAATACGGGCCGAGAAATAAAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR GCA 90 bp | CGATATTTCTGTGTGTGTGAGAATCCAGCACAATTATTTTGCCCGTTTTCCCAATACATTTATAACAAATaGGACGAGCTCCGCGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RYFCVCENPAQLFCPFSQYIYNK*DELRVT Trigger: AGTGACGCGGAGCTCGTCGCATTTGTTATAAATGTA...TTGGGAAAACGGGCAAAATAATTGTGCTGGATTCTCACACACACAGAAATATCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CCA 90 bp | GCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAACACATTTACTTGTTAGAAAGCAGTaGACATCATTCTTGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ARLQYVLVQRLCFLETHLLVRKQ*TSFLNF Trigger: AAAGTTCAAGAATGATGTCCACTGCTTTCTAACAAG...TAAATGTGTTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS GCA 90 bp | GCGCCCTCGGCGGAGCGGTGCAAACAGGTGCAGTCGTGGCCAAGTTaGAGCTCCGCTTTTGGGGCCGGGAGCGGTGCGCTGGGCCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: APSAERCKQVQSWPS*SSAFGAGSGALGPA Trigger: GGCCGGGCCCAGCGCACCGCTCCCGGCCCCAAAAGCGGAGCTGCAACTTGGCCACGACTGCACCTGTTTGCACCGCTCCGCCGAGGGCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS GCA 90 bp | CCGCCACCGCAGCCCAGGCGCCCTCGGCGGAGCGGTGCAAACAGGTaGAGTCGTGGCCAAGTTGCAGCTCCGCTTTTGGGGCCGGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PPPQPRRPRRSGANR*SRGQVAAPLLGPGA Trigger: CGCTCCCGGCCCCAAAAGCGGAGCTGCAACTTGGCCACGACTGCACCTGTTTGCACCGCTCCGCCGAGGGCGCCTGGGCTGCGGTGGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS GCA 90 bp | GGGCCTGGGCGCCGCCGGGCGAGTGCAGGTCGGTCTCCATCATCATaGTGTACATCGGGGCGGCTGGCGGGTTCACCGGCACCGCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPGRRRASAGRSPSS*CTSGRLAGSPAPRG Trigger: TCCTCGCGGTGCCGGTGAACCCGCCAGCCGCCCCGATGTACAGCATGATGATGGAGACCGACCTGCACTCGCCCGGCGGCGCCCAGGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS CCA 90 bp | GCGGTGCAAACAGGTGCAGTCGTGGCCAAGTTGCAGCTCCGCTTTTaGGGCCGGGAGCGGTGCGCTGGGCCCGGCCCGGGGTGTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AVQTGAVVAKLQLRF*GRERCAGPGPGCAV Trigger: GACAGCACACCCCGGGCCGGGCCCAGCGCACCGCTCCCGGCCCCAAAAGCGGAGCTGCAACTTGGCCACGACTGCACCTGTTTGCACCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS CCA 90 bp | GCAGCCCAGGCGCCCTCGGCGGAGCGGTGCAAACAGGTGCAGTCGTaGCCAAGTTGCAGCTCCGCTTTTGGGGCCGGGAGCGGTGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AAQAPSAERCKQVQS*PSCSSAFGAGSGAL Trigger: CAGCGCACCGCTCCCGGCCCCAAAAGCGGAGCTGCAACTTGGCCACGACTGCACCTGTTTGCACCGCTCCGCCGAGGGCGCCTGGGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS CCA 90 bp | CATCGGGGCGGCTGGCGGGTTCACCGGCACCGCGAGGAGAGGGCCTaGAGCATAGACGGCCGGGGTGGGAGGGAGACGGAGAGGAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: HRGGWRVHRHREERA*SIDGRGGRETERNS Trigger: TGAATTCCTCTCCGTCTCCCTCCCACCCCGGCCGTCTATGCTCCAGGCCCTCTCCTCGCGGTGCCGGTGAACCCGCCAGCCGCCCCGATG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS CCA 90 bp | CGAGTGCAGGTCGGTCTCCATCATCATGCTGTACATCGGGGCGGCTaGCGGGTTCACCGGCACCGCGAGGAGAGGGCCTGGAGCATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RVQVGLHHHAVHRGG*RVHRHREERAWSID Trigger: GTCTATGCTCCAGGCCCTCTCCTCGCGGTGCCGGTGAACCCGCCAGCCGCCCCGATGTACAGCATGATGATGGAGACCGACCTGCACTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CAA 90 bp | AGGGTCTCCGGGGAAGGTGAGTGGGGGACACGCGTCACCCGGCGTTCGTCTCCAAACTGTAAAAGCTGCTaGCCTGGCGTCCCGGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RVSGEGEWGTRVTRRSSPNCKSC*PGVPGA Trigger: TGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTT...TGGAGACGAACGCCGGGTGACGCGTGTCCCCCACTCACCTTCCCCGGAGACCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS-3UTR CAA 90 bp | GACGAGCTCCGCGTCACTTGGGCTCCGGCGGTCGGCGCCGTCCGGAAGCAACGCCCTAGATGCCAACAATaGGACACAGAAACTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DELRVTWAPAVGAVRKQRPRCQQ*DTETPG Trigger: CCCTGGAGTTTCTGTGTCCAATTGTTGGCATCTAGG...GCGTTGCTTCCGGACGGCGCCGACCGCCGGAGCCCAAGTGACGCGGAGCTCGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS TCA 90 bp | ACACGCACTCGGCGCCGGTTCGGCTCGCAGGTGGAAAGTTTCTCCTaGTGCACAAACCACTTGCCAAAGAGGCCGACGGTCGGGGTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TRTRRRFGSQVESFS*CTNHLPKRPTVGVA Trigger: GGCGACCCCGACCGTCGGCCTCTTTGGCAAGTGGTTTGTGCATCAGGAGAAACTTTCCACCTGCGAGCCGAACCGGCGCCGAGTGCGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
||
| CDS GCA 90 bp | GGTTCGGCTCGCAGGTGGAAAGTTTCTCCTGATGCACAAACCACTTaGCAAAGAGGCCGACGGTCGGGGTCGCCGTCTTCGCCGCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: GSARRWKVSPDAQTT*QRGRRSGSPSSPPP Trigger: CGGTGGCGGCGAAGACGGCGACCCCGACCGTCGGCCTCTTTGGCAAGTGGTTTGTGCATCAGGAGAAACTTTCCACCTGCGAGCCGAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | GTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCCTACTGTAATCCGAGCTCCGCGTCACTaGGGCTCCGGCGGTCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: VLPWPSTEFTVGSGPTVIRAPRH*GSGGRR Trigger: GCGCCGACCGCCGGAGCCCAAGTGACGCGGAGCTCG...GATTACAGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | GACGAGCTCCGCGTCACTTGGGCTCCGGCGGTCGGCGCCGTCCGGAAGCAACGCTCTCAGCTAATTTCCTaGCCCCCACCCTGTGATATT | + |
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Preference number: 5 (lower is better) Translates to: DELRVTWAPAVGAVRKQRSQLIS*PPPCDI Trigger: AATATCACAGGGTGGGGGCAAGGAAATTAGCTGAGA...GCGTTGCTTCCGGACGGCGCCGACCGCCGGAGCCCAAGTGACGCGGAGCTCGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | ATGCCAAACTGTAAAAGCTGCTTGCCTGGCGTCCCGGGCGCACTAACTCAGCTTGTTGCAGCTCCGCTTTaGGGGCCGGGAGCGGTGCGC | + |
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Preference number: 5 (lower is better) Translates to: MPNCKSCLPGVPGALTQLVAAPL*GPGAVR Trigger: GCGCACCGCTCCCGGCCCCAAAAGCGGAGCTGCAAC...AAGCTGAGTTAGTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | GTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGGCCTACTGTAATCTTGACCCGGTCCTGGTaGGCCTTGGCGCCCCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: VLPWPSTEFTVGSGPTVILTRSW*ALAPPP Trigger: CGGCGGGGGCGCCAAGGCCAACCAGGACCGGGTCAA...GATTACAGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | CCTCCCTCCTCTGGACCAAACTGTGGCGCAGACCCCCAGCCAGGTGGAAGGCGCCGGCTGCAGTACGTTTaGGTTCAGCGATTGTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: PPSSGPNCGADPQPGGRRRLQYV*VQRLCF Trigger: GAAACACAATCGCTGAACCAAAACGTACTGCAGCCG...GCGCCTTCCACCTGGCTGGGGGTCTGCGCCACAGTTTGGTCCAGAGGAGGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | AACGCGGAGGAAAGTGAGCGCGCCGGCCGGTATACAAAAGTGGGCTTCGCCTCTACCCTCAAGGTCCCATaGGACCCTCAAGGTCCCGGT | + |
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Preference number: 5 (lower is better) Translates to: NAEESERAGRYTKVGFASTLKVP*DPQGPG Trigger: ACCGGGACCTTGAGGGTCCAATGGGACCTTGAGGGT...AGAGGCGAAGCCCACTTTTGTATACCGGCCGGCGCGCTCACTTTCCTCCGCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | GACCAAACTGTGGCGCAGACCCCCAGCCAGGTGGAAGGCGCCCCGCTTGCAGCAAAGGAAATAAGGTGGTaGGAGCACCTGGCATTGGCT | + |
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Preference number: 5 (lower is better) Translates to: DQTVAQTPSQVEGAPLAAKEIRW*EHLALA Trigger: AGCCAATGCCAGGTGCTCCAACCACCTTATTTCCTT...TGCTGCAAGCGGGGCGCCTTCCACCTGGCTGGGGGTCTGCGCCACAGTTTGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | AAGAAAACACCGAAGTTCAGTCTAAAACCCAAGTCTGGTGTCAGCGCCCGGCGGGCAGTCGTGGCCAAGTaGCAGCTCCGCTTTTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: KKTPKFSLKPKSGVSARRAVVAK*QLRFWG Trigger: GCCCCAAAAGCGGAGCTGCAACTTGGCCACGACTGC...CCGCCGGGCGCTGACACCAGACTTGGGTTTTAGACTGAACTTCGGTGTTTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | GTGAATACGATGAGTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGTGGAAGGCGCCCCGCTaGCAGCAAGGTAACGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: VNTMSVTLAKHRIHSRLRWKAPR*QQGNAQ Trigger: CTGCGCGTTACCTTGCTGCAAGCGGGGCGCCTTCCA...CCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACACTCATCGTATTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | GACCAAACTGTGGCGCAGACCCCCAGCCAGGTGGAAGGCGCCCCGCTTGCAGCAGTTTTGGTTCAGCGATaGTGTTTCCTTGAAACACAT | + |
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Preference number: 5 (lower is better) Translates to: DQTVAQTPSQVEGAPLAAVLVQR*CFLETH Trigger: ATGTGTTTCAAGGAAACACAATCGCTGAACCAAAAC...TGCTGCAAGCGGGGCGCCTTCCACCTGGCTGGGGGTCTGCGCCACAGTTTGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS CCA 90 bp | AAAAAGGCAGAAACACACGCACTCGGCGCCGGTTCGGCTCGCAGGTaGAAAGTTTCTCCTGATGCACAAACCACTTGCCAAAGAGGCCGA | + |
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Preference number: 5 (lower is better) Translates to: KKAETHALGAGSARR*KVSPDAQTTCQRGR Trigger: TCGGCCTCTTTGGCAAGTGGTTTGTGCATCAGGAGAAACTTTCCACCTGCGAGCCGAACCGGCGCCGAGTGCGTGTGTTTCTGCCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | CTTTGTCCTTCATCCATGGCCTGGTCCAGGGTCCCACCACTGGGGTCTTCCCTTACGATGAGTGTTACCTaGGCCAAGCACCGAATTCAC | + |
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Preference number: 5 (lower is better) Translates to: LCPSSMAWSRVPPLGSSLTMSVT*AKHRIH Trigger: GTGAATTCGGTGCTTGGCCAAGGTAACACTCATCGT...AAGGGAAGACCCCAGTGGTGGGACCCTGGACCAGGCCATGGATGAAGGACAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | ATGCCAAACTGTAAAAGCTGCTTGCCTGGCGTCCCGGGCGCACTAACTCAGCTTCTTTTCTCCACTAATTaGAATTGGAGCGACACTGCT | + |
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Preference number: 5 (lower is better) Translates to: MPNCKSCLPGVPGALTQLLFSTN*NWSDTA Trigger: AGCAGTGTCGCTCCAATTCAAATTAGTGGAGAAAAG...AAGCTGAGTTAGTGCGCCCGGGACGCCAGGCAAGCAGCTTTTACAGTTTGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | CTAAAGTGGGGCCCACATCCTAATCTTGAGCCAAGACCTAGATGCCAACAATTGTTGGAGCACCTGGCATaGGCTATTTCAGCTGACTGT | + |
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Preference number: 5 (lower is better) Translates to: LKWGPHPNLEPRPRCQQLLEHLA*AISADC Trigger: ACAGTCAGCTGAAATAGCCAATGCCAGGTGCTCCAA...CAATTGTTGGCATCTAGGTCTTGGCTCAAGATTAGGATGTGGGCCCCACTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | CGATATTTCTGTGTGTGTGAGAATCCAGCACAATTATTTTGCCCGTTTTCCCAAGACCTGCCCTGGTCTTaGTCCTTCATCCATGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RYFCVCENPAQLFCPFSQDLPWS*SFIHGL Trigger: CAGGCCATGGATGAAGGACAAAGACCAGGGCAGGTC...TTGGGAAAACGGGCAAAATAATTGTGCTGGATTCTCACACACACAGAAATATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | GTGAATACGATGAGTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGAATGAACAAGGCATTTaGCGTTCACATCGGTTAGCA | + |
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Preference number: 5 (lower is better) Translates to: VNTMSVTLAKHRIHSRLRNEQGI*RSHRLA Trigger: TGCTAACCGATGTGAACGCAAAATGCCTTGTTCATT...CCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACACTCATCGTATTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | GCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAACACATTTAGCCCACATCCTAATCTaGAGCCAAGACCTAGATGCC | + |
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Preference number: 5 (lower is better) Translates to: ARLQYVLVQRLCFLETHLAHILI*SQDLDA Trigger: GGCATCTAGGTCTTGGCTCAAGATTAGGATGTGGGC...TAAATGTGTTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | GTGAATACGATGAGTGTTACCTTGGCCAAGCACCGAATTCACAGTCGGCTCAGGTCCAGTATTTTCCTTTaGACAAGAATGTGGGAACGT | + |
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Preference number: 5 (lower is better) Translates to: VNTMSVTLAKHRIHSRLRSSIFL*TRMWER Trigger: ACGTTCCCACATTCTTGTCAAAAGGAAAATACTGGA...CCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACACTCATCGTATTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | CGATATTTCTGTGTGTGTGAGAATCCAGCACAATTATTTTGCCCGTTTTCCCAAACATCGGTTAGCAACTaGCATCCCAGTTCACGCGGG | + |
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Preference number: 5 (lower is better) Translates to: RYFCVCENPAQLFCPFSQTSVSN*HPSSRG Trigger: CCCGCGTGAACTGGGATGCAAGTTGCTAACCGATGT...TTGGGAAAACGGGCAAAATAATTGTGCTGGATTCTCACACACACAGAAATATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | GCTCGGCTGCAGTACGTTTTGGTTCAGCGATTGTGTTTCCTTGAAACACATTTAAGCATAGGCTCACTTTaGGACGGACAGTCCATACTC | + |
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Preference number: 5 (lower is better) Translates to: ARLQYVLVQRLCFLETHLSIGSL*DGQSIL Trigger: GAGTATGGACTGTCCGTCCAAAAGTGAGCCTATGCT...TAAATGTGTTTCAAGGAAACACAATCGCTGAACCAAAACGTACTGCAGCCGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS-3UTR CAA 90 bp | GAAACAGCCGGAGCAGAAGATACTTTTATTTCTCGGCCCGTATTAACACTCAGCATTGAAAAAGGTTCCTaGAAAAATCCTGTCCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: ETAGAEDTFISRPVLTLSIEKGS*KNPVLP Trigger: TGGGAGGACAGGATTTTTCAAGGAACCTTTTTCAAT...GCTGAGTGTTAATACGGGCCGAGAAATAAAAGTATCTTCTGCTCCGGCTGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS CCA 72 bp | ACAGGTGCAGTCGTGGCCAAGTTGCAGCTCCGCTTTTaGGGCCGGGAGCGGTGCGCTGGGCCCGGCCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: TGAVVAKLQLRF*GRERCAGPGPG Trigger: CCCCGGGCCGGGCCCAGCGCACCGCTCCCGGCCCCAAAAGCGGAGCTGCAACTTGGCCACGACTGCACCTGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS CCA 72 bp | GGCTGGCGGGTTCACCGGCACCGCGAGGAGAGGGCCTaGAGCATAGACGGCCGGGGTGGGAGGGAGACGGAG | + |
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Preference number: 6 (lower is better) Translates to: GWRVHRHREERA*SIDGRGGRETE Trigger: CTCCGTCTCCCTCCCACCCCGGCCGTCTATGCTCCAGGCCCTCTCCTCGCGGTGCCGGTGAACCCGCCAGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS CAA 90 bp | GGCGCCCTCGGCGGAGCGGTGCAAACAGGTGCAGTCGTGGCCAAGTaGCAGCTCCGCTTTTGGGGCCGGGAGCGGTGCGCTGGGCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: GALGGAVQTGAVVAK*QLRFWGRERCAGPG Trigger: GCCGGGCCCAGCGCACCGCTCCCGGCCCCAAAAGCGGAGCTGCAACTTGGCCACGACTGCACCTGTTTGCACCGCTCCGCCGAGGGCGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS CAA 72 bp | AACAGGTGCAGTCGTGGCCAAGTTGCAGCTCCGCTTTaGGGGCCGGGAGCGGTGCGCTGGGCCCGGCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: NRCSRGQVAAPL*GPGAVRWARPG Trigger: CCCGGGCCGGGCCCAGCGCACCGCTCCCGGCCCCAAAAGCGGAGCTGCAACTTGGCCACGACTGCACCTGTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS CAA 90 bp | AGCGGTGCAAACAGGTGCAGTCGTGGCCAAGTTGCAGCTCCGCTTTaGGGGCCGGGAGCGGTGCGCTGGGCCCGGCCCGGGGTGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SGANRCSRGQVAAPL*GPGAVRWARPGVCC Trigger: ACAGCACACCCCGGGCCGGGCCCAGCGCACCGCTCCCGGCCCCAAAAGCGGAGCTGCAACTTGGCCACGACTGCACCTGTTTGCACCGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS GCA 72 bp | CGCCGCCGGGCGAGTGCAGGTCGGTCTCCATCATCATaGTGTACATCGGGGCGGCTGGCGGGTTCACCGGCA | + |
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Preference number: 6 (lower is better) Translates to: RRRASAGRSPSS*CTSGRLAGSPA Trigger: TGCCGGTGAACCCGCCAGCCGCCCCGATGTACAGCATGATGATGGAGACCGACCTGCACTCGCCCGGCGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS CCA 72 bp | GCGCCCTCGGCGGAGCGGTGCAAACAGGTGCAGTCGTaGCCAAGTTGCAGCTCCGCTTTTGGGGCCGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: APSAERCKQVQS*PSCSSAFGAGS Trigger: GCTCCCGGCCCCAAAAGCGGAGCTGCAACTTGGCCACGACTGCACCTGTTTGCACCGCTCCGCCGAGGGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS GCA 72 bp | GCGGAGCGGTGCAAACAGGTGCAGTCGTGGCCAAGTTaGAGCTCCGCTTTTGGGGCCGGGAGCGGTGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: AERCKQVQSWPS*SSAFGAGSGAL Trigger: CAGCGCACCGCTCCCGGCCCCAAAAGCGGAGCTGCAACTTGGCCACGACTGCACCTGTTTGCACCGCTCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS GCA 72 bp | CAGCCCAGGCGCCCTCGGCGGAGCGGTGCAAACAGGTaGAGTCGTGGCCAAGTTGCAGCTCCGCTTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: QPRRPRRSGANR*SRGQVAAPLLG Trigger: CCCCAAAAGCGGAGCTGCAACTTGGCCACGACTGCACCTGTTTGCACCGCTCCGCCGAGGGCGCCTGGGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS GCA 72 bp | GAGAGGTTCGTGGGGGCCTGGGCGCCGCCGGGCGAGTaGAGGTCGGTCTCCATCATCATGCTGTACATCGGG | + |
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Preference number: 6 (lower is better) Translates to: ERFVGAWAPPGE*RSVSIIMLYIG Trigger: CCCGATGTACAGCATGATGATGGAGACCGACCTGCACTCGCCCGGCGGCGCCCAGGCCCCCACGAACCTCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS CCA 72 bp | GTCGGTCTCCATCATCATGCTGTACATCGGGGCGGCTaGCGGGTTCACCGGCACCGCGAGGAGAGGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VGLHHHAVHRGG*RVHRHREERAW Trigger: CCAGGCCCTCTCCTCGCGGTGCCGGTGAACCCGCCAGCCGCCCCGATGTACAGCATGATGATGGAGACCGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS CAA 72 bp | GGCGGAGCGGTGCAAACAGGTGCAGTCGTGGCCAAGTaGCAGCTCCGCTTTTGGGGCCGGGAGCGGTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: GGAVQTGAVVAK*QLRFWGRERCA Trigger: AGCGCACCGCTCCCGGCCCCAAAAGCGGAGCTGCAACTTGGCCACGACTGCACCTGTTTGCACCGCTCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS TCA 72 bp | CGGCGCCGGTTCGGCTCGCAGGTGGAAAGTTTCTCCTaGTGCACAAACCACTTGCCAAAGAGGCCGACGGTC | + |
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Preference number: 6 (lower is better) Translates to: RRRFGSQVESFS*CTNHLPKRPTV Trigger: GACCGTCGGCCTCTTTGGCAAGTGGTTTGTGCATCAGGAGAAACTTTCCACCTGCGAGCCGAACCGGCGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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| CDS GCA 72 bp | CGCAGGTGGAAAGTTTCTCCTGATGCACAAACCACTTaGCAAAGAGGCCGACGGTCGGGGTCGCCGTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: RRWKVSPDAQTT*QRGRRSGSPSS Trigger: CGAAGACGGCGACCCCGACCGTCGGCCTCTTTGGCAAGTGGTTTGTGCATCAGGAGAAACTTTCCACCTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330949.3 |
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