RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SOWAHB (Homo sapiens)

Ensembl gene IDs: ENSG00000186212

Ensembl transcript IDs: ENST00000334306.4

Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTaGGAAGACCCAAAGGAGGCATTAATCATTTTACCCATTAACCAC +
Preference number: 1 (lower is better)
Translates to: SPSHNWILPSCFSDQ*EDPKEALIILPINH
Trigger: GTGGTTAATGGGTAAAATGATTAATGCCTCCTTTGGGTCTTCTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
3UTR CCA 90 bp GACCCAAAGGAGGCATTAATCATTTTACCCATTAACCACCATGCATaGAATTCAAAAGAAGACTTGAGAACAGGGCTGAGGAATCTCTTA +
Preference number: 1 (lower is better)
Translates to: DPKEALIILPINHHA*NSKEDLRTGLRNLL
Trigger: TAAGAGATTCCTCAGCCCTGTTCTCAAGTCTTCTTTTGAATTCCATGCATGGTGGTTAATGGGTAAAATGATTAATGCCTCCTTTGGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334306.4
3UTR TCA 90 bp TACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATaGGCCACATGGTTTTTACATTTGGAAAGTTCCCTTCGGGTTGAT +
Preference number: 1 (lower is better)
Translates to: YTGSFHERWFQSLCK*ATWFLHLESSLRVD
Trigger: ATCAACCCGAAGGGAACTTTCCAAATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
3UTR TCA 90 bp CATTTCTCTCTTTTTATGAGTACAAACGTTGGCCATTCAAACCTCTaGAAACTAGTAACGATAATTCTGTTTGTTACACAGGGAGTTTCC +
Preference number: 1 (lower is better)
Translates to: HFSLFMSTNVGHSNL*KLVTIILFVTQGVS
Trigger: GGAAACTCCCTGTGTAACAAACAGAATTATCGTTACTAGTTTTCAGAGGTTTGAATGGCCAACGTTTGTACTCATAAAAAGAGAGAAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
3UTR-3UTR CCA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATCTGTGCCCAGCTCCATaGTGGCAAGGGAAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHLCPAP*WQGKRK
Trigger: CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAG...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
3UTR CAA 90 bp AGGATTTTAATTGTGCTTCATCAATTCCTCGAATTGCTTCTCTTTTaGTTAGACATCTGTTCCCTCTCTAGCCAAGGCCTGGGACTCCTG +
Preference number: 2 (lower is better)
Translates to: RILIVLHQFLELLLF*LDICSLSSQGLGLL
Trigger: CAGGAGTCCCAGGCCTTGGCTAGAGAGGGAACAGATGTCTAACAAAAAGAGAAGCAATTCGAGGAATTGATGAAGCACAATTAAAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334306.4
3UTR-3UTR TCA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTGCTTCTCTGATCAGTaGGAAGACCCAAAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFCFSDQ*EDPKEA
Trigger: TGCCTCCTTTGGGTCTTCTCACTGATCAGAGAAGCA...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
3UTR-3UTR GCA 90 bp ATTGTGCTTCATCAATTCCTCGAATTGCTTCTCTTTTTGTTAGACATCTGTTCCAGGATGAGGGAGTGCTaGCTGCATGTTGGACAGAGA +
Preference number: 2 (lower is better)
Translates to: IVLHQFLELLLFLLDICSRMREC*LHVGQR
Trigger: TCTCTGTCCAACATGCAGGCAGCACTCCCTCATCCT...GGAACAGATGTCTAACAAAAAGAGAAGCAATTCGAGGAATTGATGAAGCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
3UTR-3UTR CAA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGACCTGGCCCCGCCTCTaGTCTAGGTTTCTCCAGTCA +
Preference number: 3 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKTWPRL*SRFLQS
Trigger: TGACTGGAGAAACCTAGACAAGAGGCGGGGCCAGGT...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
3UTR-3UTR CAA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTCAGCTTTCAAAAAGCTaGGATGACCCTCTTGAGGTC +
Preference number: 3 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGQLSKS*DDPLEV
Trigger: GACCTCAAGAGGGTCATCCAAGCTTTTTGAAAGCTG...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
3UTR TCA 72 bp CATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTaGGAAGACCCAAAGGAGGCATTAATCATTTTACCC +
Preference number: 3 (lower is better)
Translates to: HNWILPSCFSDQ*EDPKEALIILP
Trigger: GGGTAAAATGATTAATGCCTCCTTTGGGTCTTCTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
3UTR TCA 72 bp AGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATaGGCCACATGGTTTTTACATTTGGAAAGTTCCCTT +
Preference number: 3 (lower is better)
Translates to: SFHERWFQSLCK*ATWFLHLESSL
Trigger: AAGGGAACTTTCCAAATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
3UTR TCA 72 bp CTTTTTATGAGTACAAACGTTGGCCATTCAAACCTCTaGAAACTAGTAACGATAATTCTGTTTGTTACACAG +
Preference number: 3 (lower is better)
Translates to: LFMSTNVGHSNL*KLVTIILFVTQ
Trigger: CTGTGTAACAAACAGAATTATCGTTACTAGTTTTCAGAGGTTTGAATGGCCAACGTTTGTACTCATAAAAAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGGGGTGGCCCCAAGGCTaGGTCCCCGCGGCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKGWPQG*VPAAVC
Trigger: GCAGACTGCCGCGGGGACTCAGCCTTGGGGCCACCC...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGCGCCCCAGAGGTGTCTaGGTCTCGCCCTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKRPRGV*VSPSRG
Trigger: GCCCCGGGAGGGCGAGACTCAGACACCTCTGGGGCG...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGTGCTGGTGCTGGCTaGGGGACGCGTCGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGGAGAG*GTRRGL
Trigger: GAGACCCCGACGCGTCCCCCAGCCAGCACCAGCACC...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGCTTCTCCTCCGCGGTaGCCGAGTGCGGGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGASPPR*PSAGVR
Trigger: GCGCACTCCCGCACTCGGCCACCGCGGAGGAGAAGC...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGGTGGCGGGAGGCGAGTaGGCCACTGCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKVAGGE*ATAGTG
Trigger: GCCTGTGCCTGCAGTGGCTCACTCGCCTCCCGCCAC...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGGGCAGGCAGAGCCCGTaGCGGCTTCTCCTCCGCGGT +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKGRQSP*RLLLRG
Trigger: ACCGCGGAGGAGAAGCCGGCACGGGCTCTGCCTGCC...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTAGGCGAGTGAGCCACTaGAGGCACAGGCGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGRRVSH*RHRRRL
Trigger: GAGCCGGCGCCTGTGCCTGCAGTGGCTCACTCGCCT...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGCACCTGCGGGTGCCTaGCCACCCACTCTCGAGTGC +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGAPAGA*PPTLEC
Trigger: GCACTCGAGAGTGGGTGGCCAGGCACCCGCAGGTGC...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAACGGGCGAGTGTCACCTaGGCCCGGGGCGGCACTAGC +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQRASVT*ARGGTS
Trigger: GCTAGTGCCGCCCCGGGCGCAGGTGACACTCGCCCG...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTCTCTCGGGCCATCGCTaGCTTGTCCTCCGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGLSGHR*LVLRPR
Trigger: TCTGGGGCGGAGGACAAGGCAGCGATGGCCCGAGAG...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGAAGAGCTCGCGGCGGTaGTGGTGCTGGCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKKSSRR*WCWLGD
Trigger: GTCCCCCAGCCAGCACCAGCACCGCCGCGAGCTCTT...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGGCCTCTGTCCGGGACTaGCCTTCGATCCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKASVRD*PSIRRP
Trigger: AGGGCGGCGGATCGAAGGGCAGTCCCGGACAGAGGC...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAACTCCGAGGCCGCCCCTaGGCGACTCTAGCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQLRGRP*ATLASR
Trigger: GCGAGAGGCTAGAGTCGCGCAGGGGCGGCCTCGGAG...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGGCACCACGTACTTGGTaGCGTCGGGGTCCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKAPRTW*RRGPGA
Trigger: TGCGCCAGGACCCCGACGGCACCAAGTACGTGGTGC...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGTCTGGCTGCTGCACCTaGTGGCTCCTCCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKSGCCT*WLLLRL
Trigger: GAGCCGGAGGAGGAGCCAGCAGGTGCAGCAGCCAGA...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGCTGGGTGCCGTTCCTaGCTTGGAGGGCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGAGCRS*LGGLPG
Trigger: TCCAGGAAGCCCTCCAAGGCAGGAACGGCACCCAGC...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGAGCTCGCGGCGGTGCTaGTGCTGGCTGGGGGACGCG +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISESSRRC*CWLGDA
Trigger: CGCGTCCCCCAGCCAGCACCAGCACCGCCGCGAGCT...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGGTGCCGTCGGGGTCCTaGCGCACTGCGGCGACCGAG +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISEVPSGS*RTAATE
Trigger: CTCGGTCGCCGCAGTGCGCCAGGACCCCGACGGCAC...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGCCCCCGGGGAGTCTTTaGGCCCACTGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKPPGSL*AHCCSP
Trigger: AGGAGAGCAGCAGTGGGCCCAAAGACTCCCCGGGGG...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGGTCCCCGCGGCAGTCTaGGTGAGAGAGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISEVPAAV*VREGGS
Trigger: GGAGCCGCCCTCTCTCACGCAGACTGCCGCGGGGAC...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAAGGCGGCTCTGGCTGCTaGACCTGCTGGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQGGSGC*TCWLLL
Trigger: GAGGAGGAGCCAGCAGGTGCAGCAGCCAGAGCCGCC...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAATCGCAGCCTCGACGGTaGCGGGAGGCGAGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQSQPRR*REASEP
Trigger: TGGCTCACTCGCCTCCCGCCACCGTCGAGGCTGCGA...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAAGGGGTCTGGCGGCTCTaGATTAGGCTCCGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQGVWRL*IRLRGA
Trigger: GGCTCCACGGAGCCTAATTCAGAGCCGCCAGACCCC...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTCTTTGGGCCCACTGCTaGTCTCCTCACTGCCATCAC +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGLWAHC*SPHCHH
Trigger: GTGATGGCAGTGAGGAGAGCAGCAGTGGGCCCAAAG...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTCAGGGAAAATGGGCTTaGCCCGAGGAGCTCCCAACA +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGQGKWA*PEELPT
Trigger: TGTTGGGAGCTCCTCGGGGCAAGCCCATTTTCCCTG...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGACGCGGCCCCCAGCCTaGCACAGAAAGTCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKTRPPA*HRKSSS
Trigger: ACTACTGGACTTTCTGTGCCAGGCTGGGGGCCGCGT...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp TGTCTAGGTTTCTCCAGTCAAGGAGTTCAGCTTTCAAAAAGCTTGGATGACCCTCAGCTCGCTCTCGCCTaGGCCCCTGCCGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CLGFSSQGVQLSKSLDDPQLALA*APAAAA
Trigger: AGCTGCAGCGGCAGGGGCCCAGGCGAGAGCGAGCTG...AGGGTCATCCAAGCTTTTTGAAAGCTGAACTCCTTGACTGGAGAAACCTAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGCATCAACCCTTGGGCTaGGTGCCGTTCCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKHQPLG*VPFLPW
Trigger: CCAAGGCAGGAACGGCACCCAGCCCAAGGGTTGATG...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGACCTGCATCAACCCTTaGGCTGGGTGCCGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKTCINP*AGCRSC
Trigger: GCAGGAACGGCACCCAGCCCAAGGGTTGATGCAGGT...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATCCGCGGCAGTCTGCGTaGGAGAGGGCGGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHPRQSA*ERAAPR
Trigger: CCTCGGAGCCGCCCTCTCTCACGCAGACTGCCGCGG...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAACATCCCCTCTGTTTCTaGGACCCTGAGGGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQHPLCF*DPEGSG
Trigger: GCCGGAGCCCTCAGGGTCTCAGAAACAGAGGGGATG...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGCCGAGTGCGGGAGTaGGCCGAGCTCTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHGRVRE*AELSRQ
Trigger: CTGCCGGGAGAGCTCGGCGCACTCCCGCACTCGGCC...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAACTTCAGGGGGTGGCCTaGAAGGCCATTAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQLQGVA*KAISPC
Trigger: GCAGGGGCTAATGGCCTTGCAGGCCACCCCCTGAAG...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp TGTCTAGGTTTCTCCAGTCAAGGAGTTCAGCTTTCAAAAAGCTTGGATGACCCTCTGCGTCGGCGGCTCTaGCTGCTGCACCTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: CLGFSSQGVQLSKSLDDPLRRRL*LLHLLA
Trigger: AGCCAGCAGGTGCAGCAGCCAGAGCCGCCGACGCAG...AGGGTCATCCAAGCTTTTTGAAAGCTGAACTCCTTGACTGGAGAAACCTAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTCAGAGGAGGACAATTTaGCTCTCCCTGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGQRRTI*LSLPES
Trigger: GCTCTCTGGCAGGGAGAGCCAAATTGTCCTCCTCTG...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGCCTTGGAGGGCTTCCTaGATCGAGGTGGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISEPWRAS*IEVGAD
Trigger: GTCGGCGCCCACCTCGATCCAGGAAGCCCTCCAAGG...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGCCCCAGCTGGATTCCTaGGCTTCCCCCTATCTGGGG +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISEPQLDS*ASPYLG
Trigger: CCCCAGATAGGGGGAAGCTCAGGAATCCAGCTGGGG...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTCAGCAGCAGCGGCCCTaGGTCTTCGCCGCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFQQQRP*VFAAAQ
Trigger: CTGCGCGGCGGCGAAGACGCAGGGCCGCTGCTGCTG...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATTCCGCGGTGGCCGAGTaGGGGAGTGCGCCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHSAVAE*GSAPSS
Trigger: AGAGCTCGGCGCACTCCCGCACTCGGCCACCGCGGA...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGCACTCTCGAGTGCGCTaGTGCTGCTGCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISEHSRVR*CCCCRV
Trigger: GACCCTGCAGCAGCAGCAGCAGCGCACTCGAGAGTG...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp TGTCTAGGTTTCTCCAGTCAAGGAGTTCAGCTTTCAAAAAGCTTGGATGACCCTGGCTCCGGCTGGGGCTaGCCTCCTTCCGAGATACAG +
Preference number: 4 (lower is better)
Translates to: CLGFSSQGVQLSKSLDDPGSGWG*PPSEIQ
Trigger: CTGTATCTCGGAAGGAGGGCAGCCCCAGCCGGAGCC...AGGGTCATCCAAGCTTTTTGAAAGCTGAACTCCTTGACTGGAGAAACCTAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAATCCAGTAGTGCCTCCTaGCTCAGCTCTCGGGCCATC +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQSSSAS*LSSRAI
Trigger: GATGGCCCGAGAGCTGAGCCAGGAGGCACTACTGGA...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGACAGCCAGGTTGTTCTaGAGGCATTCCCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKTARLF*RHSQQQ
Trigger: CTGCTGCTGGGAATGCCTCCAGAACAACCTGGCTGT...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTGCCCCGCGGTCATCCTaGGCAGGCAGAGCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFAPRSS*AGRARA
Trigger: GGCACGGGCTCTGCCTGCCCAGGATGACCGCGGGGC...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATCCTGAGGGCTCCGGCTaGGGCTGCCCTCCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHPEGSG*GCPPSE
Trigger: CTCGGAAGGAGGGCAGCCCCAGCCGGAGCCCTCAGG...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp TGTCTAGGTTTCTCCAGTCAAGGAGTTCAGCTTTCAAAAAGCTTGGATGACCCTGAGTCCATTGCAAGCTaGGTCGGCGGCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CLGFSSQGVQLSKSLDDPESIAS*VGGSGC
Trigger: GCAGCCAGAGCCGCCGACGCAGCTTGCAATGGACTC...AGGGTCATCCAAGCTTTTTGAAAGCTGAACTCCTTGACTGGAGAAACCTAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp TGTCTAGGTTTCTCCAGTCAAGGAGTTCAGCTTTCAAAAAGCTTGGATGACCCTAACCCTTGGGCTGGGTaGCGTTCCTGCCTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CLGFSSQGVQLSKSLDDPNPWAG*RSCLGG
Trigger: CCCTCCAAGGCAGGAACGGCACCCAGCCCAAGGGTT...AGGGTCATCCAAGCTTTTTGAAAGCTGAACTCCTTGACTGGAGAAACCTAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTAGAAAGCTCTTGAAGTaGCTCAGCAAGGCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGRKLLK*LSKAAL
Trigger: CAACGCTGCCTTGCTGAGCCACTTCAAGAGCTTTCT...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGAATAATGCAGGGAGCTaGGGGTCAGCAGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISENNAGS*GSAAPA
Trigger: GGCCGGAGCTGCTGACCCCCAGCTCCCTGCATTATT...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAAGGTTCCAAGGGCAGCTaGAGGAAGTTGTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQGSKGS*RKLSGS
Trigger: GCTGCCAGACAACTTCCTCCAGCTGCCCTTGGAACC...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAACCCTGTATCTCCTCTTaGGCACCACGTACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQPCISS*APRTWC
Trigger: GCACCAAGTACGTGGTGCTCAAGAGGAGATACAGGG...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTGCGCGGATAGGGCCCTaGTCACGGGCCTCGGGCACC +
Preference number: 4 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYIARIGP*SRASGT
Trigger: GGTGCCCGAGGCCCGTGATCAGGGCCCTATCCGCGC...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGGCGAAAGACAGTCAATaGAGGGTTCCCCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISEAKDSQ*RVPRPG
Trigger: TCCTGGGCGGGGAACCCTTCATTGACTGTCTTTCGC...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTTCGCGGCGGTGCTGGTaGTGGCTGGGGGACGCGTCG +
Preference number: 4 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYISRRCW*WLGDAS
Trigger: CGACGCGTCCCCCAGCCAGCACCAGCACCGCCGCGA...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAATGCTGCTCTCCTCACTaGCATCACTCTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQCCSPH*HHSPGP
Trigger: TGGACCAGGAGAGTGATGGCAGTGAGGAGAGCAGCA...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAAAGTCTTTGGGCCCACTaGTGCTCTCCTCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQSLWAH*CSPHCH
Trigger: ATGGCAGTGAGGAGAGCAGCAGTGGGCCCAAAGACT...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTTTCACAATCCACTCATaGTCCCTGGCATCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGFTIHS*SLASSG
Trigger: TCCACTAGATGCCAGGGAGCATGAGTGGATTGTGAA...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGAATCCCTGCCTTCTTTaGTCCAGACACCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKNPCLL*SRHQVL
Trigger: CAGGACTTGGTGTCTGGAGCAAAGAAGGCAGGGATT...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTATCAAGGACAATCCCTaGCTTCTTTGCTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGIKDNP*LLCSRH
Trigger: GTGTCTGGAGCAAAGAAGGCAGGGATTGTCCTTGAT...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGGTGGCCGTGAATGGCTaGAAGGTGCAGCGGGGTATA +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISEVAVNG*KVQRGI
Trigger: TATACCCCGCTGCACCTTGCAGCCATTCACGGCCAC...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATTCAGCAAGGCAGCGTTaGTCACGCGGCCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHSARQR*SRGPQP
Trigger: AGGCTGGGGGCCGCGTGACCAACGCTGCCTTGCTGA...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGCTGCCATCACTCTCCTaGTCCACAAAGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKLPSLS*STKSSR
Trigger: TCTGGATGACTTTGTGGACCAGGAGAGTGATGGCAG...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp TGTCTAGGTTTCTCCAGTCAAGGAGTTCAGCTTTCAAAAAGCTTGGATGACCCTGTGCCGTTCCTGCCTTaGAGGGCTTCCTGGATCGAG +
Preference number: 4 (lower is better)
Translates to: CLGFSSQGVQLSKSLDDPVPFLP*RASWIE
Trigger: CTCGATCCAGGAAGCCCTCCAAGGCAGGAACGGCAC...AGGGTCATCCAAGCTTTTTGAAAGCTGAACTCCTTGACTGGAGAAACCTAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTCTGTTTCTGAGACCCTaGGGGCTCCGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFLFLRP*GLRLGL
Trigger: CAGCCCCAGCCGGAGCCCTCAGGGTCTCAGAAACAG...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp ATTGTGCTTCATCAATTCCTCGAATTGCTTCTCTTTTTGTTAGACATCTGTTCCGTCGGCGGCTCTGGCTaGTGCACCTGCTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: IVLHQFLELLLFLLDICSVGGSG*CTCWLL
Trigger: GAGGAGCCAGCAGGTGCAGCAGCCAGAGCCGCCGAC...GGAACAGATGTCTAACAAAAAGAGAAGCAATTCGAGGAATTGATGAAGCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATCCCTACGGGAGTCGCTaGCCGGGAGTCCATTGCAAG +
Preference number: 4 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHPYGSR*PGVHCK
Trigger: CTTGCAATGGACTCCCGGGCAGCGACTCCCGTAGGG...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp ATTGTGCTTCATCAATTCCTCGAATTGCTTCTCTTTTTGTTAGACATCTGTTCCCAGGCGGGGAAGCCCTaGTTGTCGCAGCCTCGACGG +
Preference number: 4 (lower is better)
Translates to: IVLHQFLELLLFLLDICSQAGKP*LSQPRR
Trigger: CCGTCGAGGCTGCGACAAGCAGGGCTTCCCCGCCTG...GGAACAGATGTCTAACAAAAAGAGAAGCAATTCGAGGAATTGATGAAGCACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGGTTCCCAAGACAACCTaGAGCCCCTCTTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISEVPKTT*SPSSEA
Trigger: GGCTTCTGAAGAGGGGCTGCAGGTTGTCTTGGGAAC...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGAAGGCCATTAGCCCCTaGAGGGACCTGCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISEKAISP*RDLLRD
Trigger: ATCTCTCAGCAGGTCCCTGCAGGGGCTAATGGCCTT...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAAGGAGCTCCCAACAGCTaGCATATTTCCCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQGAPNS*HISPEV
Trigger: TACCTCTGGGGAAATATGGCAGCTGTTGGGAGCTCC...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGGAGCTTCCCCCTATCTaGGGTTCCCAAGACAACCTG +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISEELPPI*GSQDNL
Trigger: CAGGTTGTCTTGGGAACCCCAGATAGGGGGAAGCTC...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp TGTCTAGGTTTCTCCAGTCAAGGAGTTCAGCTTTCAAAAAGCTTGGATGACCCTCTGTGCCCAGCTCCATaGTGGCAAGGGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CLGFSSQGVQLSKSLDDPLCPAP*WQGKRK
Trigger: CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAG...AGGGTCATCCAAGCTTTTTGAAAGCTGAACTCCTTGACTGGAGAAACCTAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGAACAAAGTCCACACCTaGATCCAGGAGCCACTGGCA +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISENKVHT*IQEPLA
Trigger: TGCCAGTGGCTCCTGGATTCAGGTGTGGACTTTGTT...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp ATTGTGCTTCATCAATTCCTCGAATTGCTTCTCTTTTTGTTAGACATCTGTTCCACCCCCTGGTGGCCGTaGATGGCTGCAAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: IVLHQFLELLLFLLDICSTPWWP*MAARCS
Trigger: GCTGCACCTTGCAGCCATTCACGGCCACCAGGGGGT...GGAACAGATGTCTAACAAAAAGAGAAGCAATTCGAGGAATTGATGAAGCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp ATTGTGCTTCATCAATTCCTCGAATTGCTTCTCTTTTTGTTAGACATCTGTTCCGGGGTCCTGGCGCACTaGGGCGACCGAGTTGACGAA +
Preference number: 4 (lower is better)
Translates to: IVLHQFLELLLFLLDICSGVLAH*GDRVDE
Trigger: TTCGTCAACTCGGTCGCCGCAGTGCGCCAGGACCCC...GGAACAGATGTCTAACAAAAAGAGAAGCAATTCGAGGAATTGATGAAGCACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTTCGGGCACCTGCGGGTaGCTGGCCACCCACTCTCGA +
Preference number: 4 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYISGTCG*LATHSR
Trigger: TCGAGAGTGGGTGGCCAGGCACCCGCAGGTGCCCGA...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp TGTCTAGGTTTCTCCAGTCAAGGAGTTCAGCTTTCAAAAAGCTTGGATGACCCTCAATTTGGCTCTCCCTaGCAGAGAGCTCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CLGFSSQGVQLSKSLDDPQFGSP*QRAPPE
Trigger: CTCAGGAGGAGCTCTCTGGCAGGGAGAGCCAAATTG...AGGGTCATCCAAGCTTTTTGAAAGCTGAACTCCTTGACTGGAGAAACCTAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTTGGAATTTCTCATACTaGTTGGCCAGTTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGWNFSY*LASFHL
Trigger: CAAGTGGAAACTGGCCAACCAGTATGAGAAATTCCA...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTTGCCCGGGAGTCCATTaGAAGCTGCGTCGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYICPGVH*KLRRRL
Trigger: GAGCCGCCGACGCAGCTTGCAATGGACTCCCGGGCA...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp ATTGTGCTTCATCAATTCCTCGAATTGCTTCTCTTTTTGTTAGACATCTGTTCCCTTCTTCCCGCTCCCTaGAAGCCCCGCGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: IVLHQFLELLLFLLDICSLLPAP*KPRGHP
Trigger: AGGATGACCGCGGGGCTTCCAGGGAGCGGGAAGAAG...GGAACAGATGTCTAACAAAAAGAGAAGCAATTCGAGGAATTGATGAAGCACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp ATTGTGCTTCATCAATTCCTCGAATTGCTTCTCTTTTTGTTAGACATCTGTTCCCTGGAGGAAGTTGTCTaGCAGCACCGACCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: IVLHQFLELLLFLLDICSLEEVV*QHRPGA
Trigger: CGCGCCTGGTCGGTGCTGCCAGACAACTTCCTCCAG...GGAACAGATGTCTAACAAAAAGAGAAGCAATTCGAGGAATTGATGAAGCACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTCATGGTTTTTACATTTaGAAAGTTCCCTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGHGFYI*KVPFGL
Trigger: CAACCCGAAGGGAACTTTCCAAATGTAAAAACCATG...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp ATTGTGCTTCATCAATTCCTCGAATTGCTTCTCTTTTTGTTAGACATCTGTTCCCCAGACACCAAGTCCTaGAGGGCCCTGAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: IVLHQFLELLLFLLDICSPDTKS*RALRSP
Trigger: TGGTGACCTCAGGGCCCTTCAGGACTTGGTGTCTGG...GGAACAGATGTCTAACAAAAAGAGAAGCAATTCGAGGAATTGATGAAGCACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATTCCCACTGCTGTCCCTaGCATTTACCCGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHSHCCP*HLPEKP
Trigger: TGGCTTCTCGGGTAAATGTCAGGGACAGCAGTGGGA...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp TGTCTAGGTTTCTCCAGTCAAGGAGTTCAGCTTTCAAAAAGCTTGGATGACCCTTGTTTGGCTATCCAGTaGAACGCAGTGTACCCAGTC +
Preference number: 4 (lower is better)
Translates to: CLGFSSQGVQLSKSLDDPCLAIQ*NAVYPV
Trigger: GACTGGGTACACTGCGTTGCACTGGATAGCCAAACA...AGGGTCATCCAAGCTTTTTGAAAGCTGAACTCCTTGACTGGAGAAACCTAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAACGAGAAGCCAACCTTTaGACTAGCAATTTGATGACC +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQREANL*TSNLMT
Trigger: GGTCATCAAATTGCTAGTGCAAAGGTTGGCTTCTCG...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTAGCCAGAGGAAACCCTaGCCGGGCGAGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYISQRKP*PGECHL
Trigger: CAGGTGACACTCGCCCGGCCAGGGTTTCCTCTGGCT...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTAGAAAGGCCCCCAGCTaGATTCCTGAGCTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFRKAPS*IPELPP
Trigger: AGGGGGAAGCTCAGGAATCCAGCTGGGGGCCTTTCT...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATCTTCCTGGATCGAGGTaGGCGCCGACTTCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHLPGSR*APTSFQ
Trigger: CTGAAAAGAAGTCGGCGCCCACCTCGATCCAGGAAG...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGCTCTTCTCTTTCCCTTaGACTGTGGAATTTCTCATA +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKLFSFP*TVEFLI
Trigger: TATGAGAAATTCCACAGTCCAAGGGAAAGAGAAGAG...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAAAGTCCAAGTCATAACTaGATCTTACCCAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQSPSHN*ILPSCF
Trigger: GAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACT...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTTATGAGTACAAACGTTaGCCATTCAAACCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGYEYKR*PFKPLK
Trigger: TTTCAGAGGTTTGAATGGCCAACGTTTGTACTCATA...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATTCTTGGAGGGACAGCTaGCAACGAATGCTGCGAAAG +
Preference number: 4 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHSWRDS*QRMLRK
Trigger: CTTTCGCAGCATTCGTTGTCAGCTGTCCCTCCAAGA...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTGATAGACAGGGAAAATaGGCTTGCCCCGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFDRQGK*ACPEEL
Trigger: GAGCTCCTCGGGGCAAGCCCATTTTCCCTGTCTATC...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTGTGCTGCCTGCATGTTaGACAGAGAGACCCACCTCA +
Preference number: 4 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFVLPAC*TERPTS
Trigger: TGAGGTGGGTCTCTCTGTCCAACATGCAGGCAGCAC...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATTGCTTCTCTGATCAGTaGGAAGACCCAAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHCFSDQ*EDPKEA
Trigger: TGCCTCCTTTGGGTCTTCTCACTGATCAGAGAAGCA...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTAGGATGAGGGAGTGCTaGCTGCATGTTGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFRMREC*LHVGQR
Trigger: TCTCTGTCCAACATGCAGGCAGCACTCCCTCATCCT...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGATTAACCACCATGCATaGAATTCAAAAGAAGACTTG +
Preference number: 4 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKINHHA*NSKEDL
Trigger: CAAGTCTTCTTTTGAATTCCATGCATGGTGGTTAAT...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAAAAAAATAAAGCCATCTaGTTTCAAACCTGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: DIRSREVNTISLDHPLYQKNKAI*FQTWCF
Trigger: GAAGCACCAGGTTTGAAATCAGATGGCTTTATTTTT...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTGAATCCAGGAGCCACTaGCAAGCTTCACAATCCACT +
Preference number: 4 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFESRSH*QASQST
Trigger: AGTGGATTGTGAAGCTTGCCAGTGGCTCCTGGATTC...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
3UTR CAA 72 bp ATTGTGCTTCATCAATTCCTCGAATTGCTTCTCTTTTaGTTAGACATCTGTTCCCTCTCTAGCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: IVLHQFLELLLF*LDICSLSSQGL
Trigger: CAGGCCTTGGCTAGAGAGGGAACAGATGTCTAACAAAAAGAGAAGCAATTCGAGGAATTGATGAAGCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTTTGTGCAAGGCCAGTTaGGGGTCCTCCCAGAACAAA +
Preference number: 4 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYILCKAS*GSSQNK
Trigger: TTTGTTCTGGGAGGACCCTCAACTGGCCTTGCACAA...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGCAGTCACTATGTAAATaGGCCACATGGTTTTTACAT +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISEQSLCK*ATWFLH
Trigger: ATGTAAAAACCATGTGGCTCATTTACATAGTGACTG...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATCACAGGGAGTTTCCATaGAAGATGGTTTCAGTCACT +
Preference number: 4 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHHREFP*KMVSVT
Trigger: AGTGACTGAAACCATCTTTCATGGAAACTCCCTGTG...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGGGCCATTCAAACCTCTaGAAACTAGTAACGATAATT +
Preference number: 4 (lower is better)
Translates to: NGVQVITGSYPAASLISEGHSNL*KLVTII
Trigger: AATTATCGTTACTAGTTTTCAGAGGTTTGAATGGCC...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp ATTGTGCTTCATCAATTCCTCGAATTGCTTCTCTTTTTGTTAGACATCTGTTCCCAATATGGCTTACTGTaGCCAGCTCCATGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: IVLHQFLELLLFLLDICSQYGLL*PAPWWQ
Trigger: TTGCCACCATGGAGCTGGGCACAGTAAGCCATATTG...GGAACAGATGTCTAACAAAAAGAGAAGCAATTCGAGGAATTGATGAAGCACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTCCCCAGAGGTATTACTaGTTAGATACTGCCATGGCT +
Preference number: 4 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFPQRYY*LDTAMA
Trigger: AGCCATGGCAGTATCTAACCAGTAATACCTCTGGGG...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTTGCCCAGCTCCATGGTaGCAAGGGAAGAGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYICPAPW*QGKRKN
Trigger: ATTCTTCCTCTTCCCTTGCCACCATGGAGCTGGGCA...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp ATTGTGCTTCATCAATTCCTCGAATTGCTTCTCTTTTTGTTAGACATCTGTTCCTTCCACTTGTTGTGCTaGCTTTTGAGTAGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: IVLHQFLELLLFLLDICSFHLLC*LLSSAA
Trigger: CGCTGCACTACTCAAAAGTCAGCACAACAAGTGGAA...GGAACAGATGTCTAACAAAAAGAGAAGCAATTCGAGGAATTGATGAAGCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTACCAGGGATGATTTGTaGTCAGAAGTTCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYITRDDL*SEVLWG
Trigger: CCCCCACAGAACTTCTGAGCACAAATCATCCCTGGT...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTTACTGGTTAGATACTaGCATGGCTTCTTCCCACTG +
Preference number: 4 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFLLVRY*HGFFPL
Trigger: CAGTGGGAAGAAGCCATGGCAGTATCTAACCAGTAA...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR GCA 90 bp ATTGTGCTTCATCAATTCCTCGAATTGCTTCTCTTTTTGTTAGACATCTGTTCCACAGCTGACAACGAATaGTGCGAAAGACAGTCAATG +
Preference number: 4 (lower is better)
Translates to: IVLHQFLELLLFLLDICSTADNE*CERQSM
Trigger: CATTGACTGTCTTTCGCAGCATTCGTTGTCAGCTGT...GGAACAGATGTCTAACAAAAAGAGAAGCAATTCGAGGAATTGATGAAGCACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTGGGTATATCCACAACTaGACCTCACGTTTACATCAA +
Preference number: 4 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFGYIHN*TSRLHQ
Trigger: TTGATGTAAACGTGAGGTCCAGTTGTGGATATACCC...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTATTTCTCATACTGGTTaGCCAGTTTCCACTTGTTGT +
Preference number: 4 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFISHTG*PVSTCC
Trigger: ACAACAAGTGGAAACTGGCCAACCAGTATGAGAAAT...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR TCA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTCATTTTCTCACTCCATaGACTCACAAGTTATCGGTC +
Preference number: 4 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYIHFLTP*THKLSV
Trigger: GACCGATAACTTGTGAGTTCATGGAGTGAGAAAATG...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CCA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTCTTTCCCTTGGACTGTaGAATTTCTCATACTGGTTG +
Preference number: 4 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYILSLGL*NFSYWL
Trigger: CAACCAGTATGAGAAATTCCACAGTCCAAGGGAAAG...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp CGCCGCCGCGCAGCTCGCTCTCGCCTGGGCCCCTGCCGCTGCAGCTaGGGGCACCGGCGGCCTCTGTCCGGGACTGCCCTTCGATCCGCC +
Preference number: 5 (lower is better)
Translates to: RRRAARSRLGPCRCS*GHRRPLSGTALRSA
Trigger: GGCGGATCGAAGGGCAGTCCCGGACAGAGGCCGCCGGTGCCCGCAGCTGCAGCGGCAGGGGCCCAGGCGAGAGCGAGCTGCGCGGCGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp GCCCTGCGTCTTCGCCGCCGCGCAGCTCGCTCTCGCCTGGGCCCCTaGCGCTGCAGCTGCGGGCACCGGCGGCCTCTGTCCGGGACTGCC +
Preference number: 5 (lower is better)
Translates to: ALRLRRRAARSRLGP*RCSCGHRRPLSGTA
Trigger: GGCAGTCCCGGACAGAGGCCGCCGGTGCCCGCAGCTGCAGCGGCAGGGGCCCAGGCGAGAGCGAGCTGCGCGGCGGCGAAGACGCAGGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 90 bp CAGCAGCGGCCCTGCGTCTTCGCCGCCGCGCAGCTCGCTCTCGCCTaGGCCCCTGCCGCTGCAGCTGCGGGCACCGGCGGCCTCTGTCCG +
Preference number: 5 (lower is better)
Translates to: QQRPCVFAAAQLALA*APAAAAAGTGGLCP
Trigger: CGGACAGAGGCCGCCGGTGCCCGCAGCTGCAGCGGCAGGGGCCCAGGCGAGAGCGAGCTGCGCGGCGGCGAAGACGCAGGGCCGCTGCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp CCCCTGCCGCTGCAGCTGCGGGCACCGGCGGCCTCTGTCCGGGACTaGCCTTCGATCCGCCGCCCTTCCCGGGCGCCCTACGGGAGTCGC +
Preference number: 5 (lower is better)
Translates to: PLPLQLRAPAASVRD*PSIRRPSRAPYGSR
Trigger: GCGACTCCCGTAGGGCGCCCGGGAAGGGCGGCGGATCGAAGGGCAGTCCCGGACAGAGGCCGCCGGTGCCCGCAGCTGCAGCGGCAGGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp CGTCTTCGCCGCCGCGCAGCTCGCTCTCGCCTGGGCCCCTGCCGCTaGAGCTGCGGGCACCGGCGGCCTCTGTCCGGGACTGCCCTTCGA +
Preference number: 5 (lower is better)
Translates to: RLRRRAARSRLGPCR*SCGHRRPLSGTALR
Trigger: TCGAAGGGCAGTCCCGGACAGAGGCCGCCGGTGCCCGCAGCTGCAGCGGCAGGGGCCCAGGCGAGAGCGAGCTGCGCGGCGGCGAAGACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp CCGCTCCCTGGAAGCCCCGCGGTCATCCTGGGCAGGCAGAGCCCGTaGCGGCTTCTCCTCCGCGGTGGCCGAGTGCGGGAGTGCGCCGAG +
Preference number: 5 (lower is better)
Translates to: PLPGSPAVILGRQSP*RLLLRGGRVRECAE
Trigger: CTCGGCGCACTCCCGCACTCGGCCACCGCGGAGGAGAAGCCGGCACGGGCTCTGCCTGCCCAGGATGACCGCGGGGCTTCCAGGGAGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 90 bp GCTAGCGCGCCTTCTTCCCGCTCCCTGGAAGCCCCGCGGTCATCCTaGGCAGGCAGAGCCCGTGCCGGCTTCTCCTCCGCGGTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: ASAPSSRSLEAPRSS*AGRARAGFSSAVAE
Trigger: CTCGGCCACCGCGGAGGAGAAGCCGGCACGGGCTCTGCCTGCCCAGGATGACCGCGGGGCTTCCAGGGAGCGGGAAGAAGGCGCGCTAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 90 bp CAGGCACAGGCGCCGGCTCAGCTAGCGCGCCTTCTTCCCGCTCCCTaGAAGCCCCGCGGTCATCCTGGGCAGGCAGAGCCCGTGCCGGCT +
Preference number: 5 (lower is better)
Translates to: QAQAPAQLARLLPAP*KPRGHPGQAEPVPA
Trigger: AGCCGGCACGGGCTCTGCCTGCCCAGGATGACCGCGGGGCTTCCAGGGAGCGGGAAGAAGGCGCGCTAGCTGAGCCGGCGCCTGTGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp CGCCCTTCCCGGGCGCCCTACGGGAGTCGCTGCCCGGGAGTCCATTaGAAGCTGCGTCGGCGGCTCTGGCTGCTGCACCTGCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: RPSRAPYGSRCPGVH*KLRRRLWLLHLLAP
Trigger: AGGAGCCAGCAGGTGCAGCAGCCAGAGCCGCCGACGCAGCTTGCAATGGACTCCCGGGCAGCGACTCCCGTAGGGCGCCCGGGAAGGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp TGCCCTTCGATCCGCCGCCCTTCCCGGGCGCCCTACGGGAGTCGCTaGCCGGGAGTCCATTGCAAGCTGCGTCGGCGGCTCTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CPSIRRPSRAPYGSR*PGVHCKLRRRLWLL
Trigger: CAGCAGCCAGAGCCGCCGACGCAGCTTGCAATGGACTCCCGGGCAGCGACTCCCGTAGGGCGCCCGGGAAGGGCGGCGGATCGAAGGGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 90 bp GGTCATCCTGGGCAGGCAGAGCCCGTGCCGGCTTCTCCTCCGCGGTaGCCGAGTGCGGGAGTGCGCCGAGCTCTCCCGGCAGTACAGCCA +
Preference number: 5 (lower is better)
Translates to: GHPGQAEPVPASPPR*PSAGVRRALPAVQP
Trigger: TGGCTGTACTGCCGGGAGAGCTCGGCGCACTCCCGCACTCGGCCACCGCGGAGGAGAAGCCGGCACGGGCTCTGCCTGCCCAGGATGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp TGGGCAGGCAGAGCCCGTGCCGGCTTCTCCTCCGCGGTGGCCGAGTaGGGGAGTGCGCCGAGCTCTCCCGGCAGTACAGCCAGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: WAGRARAGFSSAVAE*GSAPSSPGSTARLF
Trigger: GAACAACCTGGCTGTACTGCCGGGAGAGCTCGGCGCACTCCCGCACTCGGCCACCGCGGAGGAGAAGCCGGCACGGGCTCTGCCTGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp CAGAGCCCGTGCCGGCTTCTCCTCCGCGGTGGCCGAGTGCGGGAGTaGGCCGAGCTCTCCCGGCAGTACAGCCAGGTTGTTCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: QSPCRLLLRGGRVRE*AELSRQYSQVVLEA
Trigger: TGCCTCCAGAACAACCTGGCTGTACTGCCGGGAGAGCTCGGCGCACTCCCGCACTCGGCCACCGCGGAGGAGAAGCCGGCACGGGCTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS TCA 90 bp TGGAGGAAGTTGTCTGGCAGCACCGACCAGGCGCGGATAGGGCCCTaGTCACGGGCCTCGGGCACCTGCGGGTGCCTGGCCACCCACTCT +
Preference number: 5 (lower is better)
Translates to: WRKLSGSTDQARIGP*SRASGTCGCLATHS
Trigger: AGAGTGGGTGGCCAGGCACCCGCAGGTGCCCGAGGCCCGTGATCAGGGCCCTATCCGCGCCTGGTCGGTGCTGCCAGACAACTTCCTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp CACGGGCCTCGGGCACCTGCGGGTGCCTGGCCACCCACTCTCGAGTaGGCTGCTGCTGCTGCTGCAGGGTCGAATAATGCAGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: HGPRAPAGAWPPTLE*AAAAAAGSNNAGSW
Trigger: CCAGCTCCCTGCATTATTCGACCCTGCAGCAGCAGCAGCAGCGCACTCGAGAGTGGGTGGCCAGGCACCCGCAGGTGCCCGAGGCCCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp ACTGCGGCGACCGAGTTGACGAAGCCCTTGAAGAGCTCGCGGCGGTaGTGGTGCTGGCTGGGGGACGCGTCGGGGTCTCGGAGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: TAATELTKPLKSSRR*WCWLGDASGSRRKL
Trigger: GAGCTTTCTCCGAGACCCCGACGCGTCCCCCAGCCAGCACCAGCACCGCCGCGAGCTCTTCAAGGGCTTCGTCAACTCGGTCGCCGCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 90 bp GCGGCGACCGAGTTGACGAAGCCCTTGAAGAGCTCGCGGCGGTGCTaGTGCTGGCTGGGGGACGCGTCGGGGTCTCGGAGAAAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: AATELTKPLKSSRRC*CWLGDASGSRRKLL
Trigger: CAAGAGCTTTCTCCGAGACCCCGACGCGTCCCCCAGCCAGCACCAGCACCGCCGCGAGCTCTTCAAGGGCTTCGTCAACTCGGTCGCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 90 bp GGCGGCTCTGAATTAGGCTCCGTGGAGCCGGGTTCCAAGGGCAGCTaGAGGAAGTTGTCTGGCAGCACCGACCAGGCGCGGATAGGGCCC +
Preference number: 5 (lower is better)
Translates to: GGSELGSVEPGSKGS*RKLSGSTDQARIGP
Trigger: GGGCCCTATCCGCGCCTGGTCGGTGCTGCCAGACAACTTCCTCCAGCTGCCCTTGGAACCCGGCTCCACGGAGCCTAATTCAGAGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp GCGACCGAGTTGACGAAGCCCTTGAAGAGCTCGCGGCGGTGCTGGTaGTGGCTGGGGGACGCGTCGGGGTCTCGGAGAAAGCTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: ATELTKPLKSSRRCW*WLGDASGSRRKLLK
Trigger: CTTCAAGAGCTTTCTCCGAGACCCCGACGCGTCCCCCAGCCAGCACCAGCACCGCCGCGAGCTCTTCAAGGGCTTCGTCAACTCGGTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 90 bp TTGAAGTGGCTCAGCAAGGCAGCGTTGGTCACGCGGCCCCCAGCCTaGCACAGAAAGTCCAGTAGTGCCTCCTGGCTCAGCTCTCGGGCC +
Preference number: 5 (lower is better)
Translates to: LKWLSKAALVTRPPA*HRKSSSASWLSSRA
Trigger: GGCCCGAGAGCTGAGCCAGGAGGCACTACTGGACTTTCTGTGCCAGGCTGGGGGCCGCGTGACCAACGCTGCCTTGCTGAGCCACTTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 90 bp ACCGAGTTGACGAAGCCCTTGAAGAGCTCGCGGCGGTGCTGGTGCTaGCTGGGGGACGCGTCGGGGTCTCGGAGAAAGCTCTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: TELTKPLKSSRRCWC*LGDASGSRRKLLKW
Trigger: CCACTTCAAGAGCTTTCTCCGAGACCCCGACGCGTCCCCCAGCCAGCACCAGCACCGCCGCGAGCTCTTCAAGGGCTTCGTCAACTCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 90 bp CATCAACCCTTGGGCTGGGTGCCGTTCCTGCCTTGGAGGGCTTCCTaGATCGAGGTGGGCGCCGACTTCTTTTCAGCAAGCCCTCATCGA +
Preference number: 5 (lower is better)
Translates to: HQPLGWVPFLPWRAS*IEVGADFFSASPHR
Trigger: TCGATGAGGGCTTGCTGAAAAGAAGTCGGCGCCCACCTCGATCCAGGAAGCCCTCCAAGGCAGGAACGGCACCCAGCCCAAGGGTTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp CAGAAGCCCCCGGGGAGTCTTTGGGCCCACTGCTGCTCTCCTCACTaGCATCACTCTCCTGGTCCACAAAGTCATCCAGATCTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: QKPPGSLWAHCCSPH*HHSPGPQSHPDLGG
Trigger: CCCTCCAAGATCTGGATGACTTTGTGGACCAGGAGAGTGATGGCAGTGAGGAGAGCAGCAGTGGGCCCAAAGACTCCCCGGGGGCTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS TCA 90 bp AACAGGAAAGAGAGAGTGCGAGGAAAGACAGGGGTCTGGCGGCTCTaGATTAGGCTCCGTGGAGCCGGGTTCCAAGGGCAGCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: NRKERVRGKTGVWRL*IRLRGAGFQGQLEE
Trigger: TTCCTCCAGCTGCCCTTGGAACCCGGCTCCACGGAGCCTAATTCAGAGCCGCCAGACCCCTGTCTTTCCTCGCACTCTCTCTTTCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 90 bp GTGATAAACCTGCATCAACCCTTGGGCTGGGTGCCGTTCCTGCCTTaGAGGGCTTCCTGGATCGAGGTGGGCGCCGACTTCTTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: VINLHQPLGWVPFLP*RASWIEVGADFFSA
Trigger: TGCTGAAAAGAAGTCGGCGCCCACCTCGATCCAGGAAGCCCTCCAAGGCAGGAACGGCACCCAGCCCAAGGGTTGATGCAGGTTTATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAACTGCCCGGGAGTCCATaGCAAGCTGCGTCGGCGGCT +
Preference number: 5 (lower is better)
Translates to: DIRSREVNTISLDHPLYQLPGSP*QAASAA
Trigger: AGCCGCCGACGCAGCTTGCAATGGACTCCCGGGCAG...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS TCA 90 bp CAATCCCTGCCTTCTTTGCTCCAGACACCAAGTCCTGAAGGGCCCTaGGGTCACCATGTTTGGCTATCCAGTGCAACGCAGTGTACCCAG +
Preference number: 5 (lower is better)
Translates to: QSLPSLLQTPSPEGP*GHHVWLSSATQCTQ
Trigger: CTGGGTACACTGCGTTGCACTGGATAGCCAAACATGGTGACCTCAGGGCCCTTCAGGACTTGGTGTCTGGAGCAAAGAAGGCAGGGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS TCA 90 bp GAAGCCAACCTTTGCACTAGCAATTTGATGACCCCCTGGTGGCCGTaGATGGCTGCAAGGTGCAGCGGGGTATATCCACAACTGGACCTC +
Preference number: 5 (lower is better)
Translates to: EANLCTSNLMTPWWP*MAARCSGVYPQLDL
Trigger: GAGGTCCAGTTGTGGATATACCCCGCTGCACCTTGCAGCCATTCACGGCCACCAGGGGGTCATCAAATTGCTAGTGCAAAGGTTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp TGTCTAGGTTTCTCCAGTCAAGGAGTTCAGCTTTCAAAAAGCTTGGATGACCCTCTCAGCAAGGCAGCGTaGGTCACGCGGCCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: CLGFSSQGVQLSKSLDDPLSKAA*VTRPPA
Trigger: GGCTGGGGGCCGCGTGACCAACGCTGCCTTGCTGAG...AGGGTCATCCAAGCTTTTTGAAAGCTGAACTCCTTGACTGGAGAAACCTAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp CCACAAAGTCATCCAGATCTTGGAGGGACAGCTGACAACGAATGCTaGGAAAGACAGTCAATGAAGGGTTCCCCGCCCAGGATTCCCAGG +
Preference number: 5 (lower is better)
Translates to: PQSHPDLGGTADNEC*ERQSMKGSPPRIPR
Trigger: CCTGGGAATCCTGGGCGGGGAACCCTTCATTGACTGTCTTTCGCAGCATTCGTTGTCAGCTGTCCCTCCAAGATCTGGATGACTTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp GGTCCACAAAGTCATCCAGATCTTGGAGGGACAGCTGACAACGAATaGTGCGAAAGACAGTCAATGAAGGGTTCCCCGCCCAGGATTCCC +
Preference number: 5 (lower is better)
Translates to: GPQSHPDLGGTADNE*CERQSMKGSPPRIP
Trigger: GGGAATCCTGGGCGGGGAACCCTTCATTGACTGTCTTTCGCAGCATTCGTTGTCAGCTGTCCCTCCAAGATCTGGATGACTTTGTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 90 bp GAGGGTCCTCCCAGAACAAAGTCCACACCTGAATCCAGGAGCCACTaGCAAGCTTCACAATCCACTCATGCTCCCTGGCATCTAGTGGAA +
Preference number: 5 (lower is better)
Translates to: EGPPRTKSTPESRSH*QASQSTHAPWHLVE
Trigger: TTCCACTAGATGCCAGGGAGCATGAGTGGATTGTGAAGCTTGCCAGTGGCTCCTGGATTCAGGTGTGGACTTTGTTCTGGGAGGACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 90 bp GGTGGCCGTGAATGGCTGCAAGGTGCAGCGGGGTATATCCACAACTaGACCTCACGTTTACATCAAGGACAATCCCTGCCTTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: GGREWLQGAAGYIHN*TSRLHQGQSLPSLL
Trigger: GAGCAAAGAAGGCAGGGATTGTCCTTGATGTAAACGTGAGGTCCAGTTGTGGATATACCCCGCTGCACCTTGCAGCCATTCACGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGGGCAGTACAGCCAGGTaGTTCTGGAGGCATTCCCAG +
Preference number: 5 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKGSTAR*FWRHSQ
Trigger: CTGGGAATGCCTCCAGAACAACCTGGCTGTACTGCC...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTCTTTGCACTAGCAATTaGATGACCCCCTGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGLCTSN*MTPWWP
Trigger: CGGCCACCAGGGGGTCATCAAATTGCTAGTGCAAAG...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp AGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGGCAAGGGAAGAGGAAGAGTGCTGCCTGCATGTaGGACAGAGAGACCCACCTC +
Preference number: 5 (lower is better)
Translates to: RKQYGLLCPAPWWQGKRKSAACM*DRETHL
Trigger: GAGGTGGGTCTCTCTGTCCAACATGCAGGCAGCACT...CTTCCTCTTCCCTTGCCACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS TCA 90 bp TCACTCTCCTGGTCCACAAAGTCATCCAGATCTTGGAGGGACAGCTaGCAACGAATGCTGCGAAAGACAGTCAATGAAGGGTTCCCCGCC +
Preference number: 5 (lower is better)
Translates to: SLSWSTKSSRSWRDS*QRMLRKTVNEGFPA
Trigger: GGCGGGGAACCCTTCATTGACTGTCTTTCGCAGCATTCGTTGTCAGCTGTCCCTCCAAGATCTGGATGACTTTGTGGACCAGGAGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGGGCAGCTGGAGGAAGTaGTCTGGCAGCACCGACCAG +
Preference number: 5 (lower is better)
Translates to: NGVQVITGSYPAASLISEGSWRK*SGSTDQ
Trigger: CTGGTCGGTGCTGCCAGACAACTTCCTCCAGCTGCC...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTCTGAGGTCACCATGTTaGGCTATCCAGTGCAACGCA +
Preference number: 5 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGLRSPC*AIQCNA
Trigger: TGCGTTGCACTGGATAGCCAAACATGGTGACCTCAG...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp GGTATATCCACAACTGGACCTCACGTTTACATCAAGGACAATCCCTaGCTTCTTTGCTCCAGACACCAAGTCCTGAAGGGCCCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: GISTTGPHVYIKDNP*LLCSRHQVLKGPEV
Trigger: GACCTCAGGGCCCTTCAGGACTTGGTGTCTGGAGCAAAGAAGGCAGGGATTGTCCTTGATGTAAACGTGAGGTCCAGTTGTGGATATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTGCGGGGAAGCCCTGCTaGTCGCAGCCTCGACGGTGG +
Preference number: 5 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFAGKPC*SQPRRW
Trigger: CCACCGTCGAGGCTGCGACAAGCAGGGCTTCCCCGC...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp TGTCTAGGTTTCTCCAGTCAAGGAGTTCAGCTTTCAAAAAGCTTGGATGACCCTGGTGCCGTTCCTGCCTaGGAGGGCTTCCTGGATCGA +
Preference number: 5 (lower is better)
Translates to: CLGFSSQGVQLSKSLDDPGAVPA*EGFLDR
Trigger: TCGATCCAGGAAGCCCTCCAAGGCAGGAACGGCACC...AGGGTCATCCAAGCTTTTTGAAAGCTGAACTCCTTGACTGGAGAAACCTAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 90 bp ACAACTGGACCTCACGTTTACATCAAGGACAATCCCTGCCTTCTTTaGTCCAGACACCAAGTCCTGAAGGGCCCTGAGGTCACCATGTTT +
Preference number: 5 (lower is better)
Translates to: TTGPHVYIKDNPCLL*SRHQVLKGPEVTMF
Trigger: AAACATGGTGACCTCAGGGCCCTTCAGGACTTGGTGTCTGGAGCAAAGAAGGCAGGGATTGTCCTTGATGTAAACGTGAGGTCCAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 90 bp GAATCCAGGAGCCACTGGCAAGCTTCACAATCCACTCATGCTCCCTaGCATCTAGTGGAACCAGGGATGATTTGTGCTCAGAAGTTCTGT +
Preference number: 5 (lower is better)
Translates to: ESRSHWQASQSTHAP*HLVEPGMICAQKFC
Trigger: ACAGAACTTCTGAGCACAAATCATCCCTGGTTCCACTAGATGCCAGGGAGCATGAGTGGATTGTGAAGCTTGCCAGTGGCTCCTGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 90 bp CTGAATTCTCTCACTGAGCAGGATGAGGGAGTGCTGCCTGCATGTTaGACAGAGAGACCCACCTCAGTCACTATACTCTTCTCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: LNSLTEQDEGVLPAC*TERPTSVTILFSFP
Trigger: AGGGAAAGAGAAGAGTATAGTGACTGAGGTGGGTCTCTCTGTCCAACATGCAGGCAGCACTCCCTCATCCTGCTCAGTGAGAGAATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp CCTGGGACTCCTGCTTCAGGAAACAATATGGCTTACTGTGCCCAGCTCCATGGTGATATTTCCTTGCTCTaGGCCTTTCTGGTAGGGGAA +
Preference number: 5 (lower is better)
Translates to: PGTPASGNNMAYCAQLHGDISLL*AFLVGE
Trigger: TTCCCCTACCAGAAAGGCCAAGAGCAAGGAAATATC...ACCATGGAGCTGGGCACAGTAAGCCATATTGTTTCCTGAAGCAGGAGTCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTCGGGCCATCGCTGCCTaGTCCTCCGCCCCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYIRAIAA*SSAPEV
Trigger: CACCTCTGGGGCGGAGGACAAGGCAGCGATGGCCCG...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATTTGAGCACCACGTACTaGGTGCCGTCGGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHLSTTY*VPSGSW
Trigger: CCAGGACCCCGACGGCACCAAGTACGTGGTGCTCAA...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAATCCCTGTATCTCCTCTaGAGCACCACGTACTTGGTG +
Preference number: 5 (lower is better)
Translates to: DIRSREVNTISLDHPLYQSLYLL*STTYLV
Trigger: CACCAAGTACGTGGTGCTCAAGAGGAGATACAGGGA...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATAACCTGCATCAACCCTaGGGCTGGGTGCCGTTCCTG +
Preference number: 5 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHNLHQP*GWVPFL
Trigger: CAGGAACGGCACCCAGCCCAAGGGTTGATGCAGGTT...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTACTGCGGCGACCGAGTaGACGAAGCCCTTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFTAATE*TKPLKS
Trigger: GCTCTTCAAGGGCTTCGTCAACTCGGTCGCCGCAGT...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp TGTCTAGGTTTCTCCAGTCAAGGAGTTCAGCTTTCAAAAAGCTTGGATGACCCTTTTGTGCAAGGCCAGTaGAGGGTCCTCCCAGAACAA +
Preference number: 5 (lower is better)
Translates to: CLGFSSQGVQLSKSLDDPFVQGQ*RVLPEQ
Trigger: TTGTTCTGGGAGGACCCTCAACTGGCCTTGCACAAA...AGGGTCATCCAAGCTTTTTGAAAGCTGAACTCCTTGACTGGAGAAACCTAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTGAGTTGACGAAGCCCTaGAAGAGCTCGCGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYIELTKP*KSSRRC
Trigger: GCACCGCCGCGAGCTCTTCAAGGGCTTCGTCAACTC...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS TCA 90 bp CTGTGGAATTTCTCATACTGGTTGGCCAGTTTCCACTTGTTGTGCTaGCTTTTGAGTAGTGCAGCGAAGGAAGTTTTTCGGGTGACACTT +
Preference number: 5 (lower is better)
Translates to: LWNFSYWLASFHLLC*LLSSAAKEVFRVTL
Trigger: AAGTGTCACCCGAAAAACTTCCTTCGCTGCACTACTCAAAAGTCAGCACAACAAGTGGAAACTGGCCAACCAGTATGAGAAATTCCACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATCAATCCCTGCCTTCTTaGCTCCAGACACCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHQSLPS*LQTPSP
Trigger: AGGACTTGGTGTCTGGAGCAAAGAAGGCAGGGATTG...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTACAGGGAAAATGGGCTaGCCCCGAGGAGCTCCCAAC +
Preference number: 5 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYITGKMG*PRGAPN
Trigger: GTTGGGAGCTCCTCGGGGCAAGCCCATTTTCCCTGT...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp GACATAAGATCCAGGGAGGTCAACACCATCTCACTCGACCATCCTCTTTACCAAACTCTTCTCTTTCCCTaGGACTGTGGAATTTCTCAT +
Preference number: 5 (lower is better)
Translates to: DIRSREVNTISLDHPLYQTLLFP*DCGISH
Trigger: ATGAGAAATTCCACAGTCCAAGGGAAAGAGAAGAGT...TTGGTAAAGAGGATGGTCGAGTGAGATGGTGTTGACCTCCCTGGATCTTATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp TGTCTAGGTTTCTCCAGTCAAGGAGTTCAGCTTTCAAAAAGCTTGGATGACCCTCAGCTTTCAAAAAGCTaGGATGACCCTCTTGAGGTC +
Preference number: 5 (lower is better)
Translates to: CLGFSSQGVQLSKSLDDPQLSKS*DDPLEV
Trigger: GACCTCAAGAGGGTCATCCAAGCTTTTTGAAAGCTG...AGGGTCATCCAAGCTTTTTGAAAGCTGAACTCCTTGACTGGAGAAACCTAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp AATGGAGTCCAAGTCATAACTGGATCTTACCCAGCTGCTTCTCTGATCAGTGAGCTTCTAGATATTTCCTaGCTCTTGGCCTTTCTGGTA +
Preference number: 5 (lower is better)
Translates to: NGVQVITGSYPAASLISELLDIS*LLAFLV
Trigger: TACCAGAAAGGCCAAGAGCAAGGAAATATCTAGAAG...CTCACTGATCAGAGAAGCAGCTGGGTAAGATCCAGTTATGACTTGGACTCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTACCTGGCCCCGCCTCTaGTCTAGGTTTCTCCAGTCA +
Preference number: 5 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYITWPRL*SRFLQS
Trigger: TGACTGGAGAAACCTAGACAAGAGGCGGGGCCAGGT...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTAAAGTCATCCAGATCTaGGAGGGACAGCTGACAACG +
Preference number: 5 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFKVIQI*EGQLTT
Trigger: CGTTGTCAGCTGTCCCTCCAAGATCTGGATGACTTT...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTTCAGAGGAGGACAATTaGGCTCTCCCTGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYISEEDN*ALPARE
Trigger: CTCTCTGGCAGGGAGAGCCAAATTGTCCTCCTCTGA...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp GGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTGGAACCAGGGATGATTaGTGCTCAGAAGTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: GVSMKDGFSHYVNEPHGFGTRDD*CSEVLW
Trigger: CCACAGAACTTCTGAGCACAAATCATCCCTGGTTCC...AAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp ACACAGGGAGTTTCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATAATTTCTCATACTGGTaGGCCAGTTTCCACTTGTTG +
Preference number: 5 (lower is better)
Translates to: TQGVSMKDGFSHYVNEPHNFSYW*ASFHLL
Trigger: CAACAAGTGGAAACTGGCCAACCAGTATGAGAAATT...ATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGAAACTCCCTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS-3UTR CAA 90 bp TCCATGAAAGATGGTTTCAGTCACTATGTAAATGAGCCACATGGTTTTTACATTGAATTGCTTCTCTTTTaGTTAGACATCTGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: SMKDGFSHYVNEPHGFYIELLLF*LDICSL
Trigger: GAGGGAACAGATGTCTAACAAAAAGAGAAGCAATTC...AATGTAAAAACCATGTGGCTCATTTACATAGTGACTGAAACCATCTTTCATGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp GCACTAGCCGCCCCCATCAGCCGCGGAGGCCAGCGCTaGCCGCAGCCCGTGAGCGCGCCAGGAGGGCCGTGG +
Preference number: 6 (lower is better)
Translates to: ALAAPISRGGQR*PQPVSAPGGPW
Trigger: CCACGGCCCTCCTGGCGCGCTCACGGGCTGCGGGCAGCGCTGGCCTCCGCGGCTGATGGGGGCGGCTAGTGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp CTTCGCCGCCGCGCAGCTCGCTCTCGCCTGGGCCCCTaGCGCTGCAGCTGCGGGCACCGGCGGCCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: LRRRAARSRLGP*RCSCGHRRPLS
Trigger: GGACAGAGGCCGCCGGTGCCCGCAGCTGCAGCGGCAGGGGCCCAGGCGAGAGCGAGCTGCGCGGCGGCGAAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 72 bp GGGCAGGCAGAGCCCGTGCCGGCTTCTCCTCCGCGGTaGCCGAGTGCGGGAGTGCGCCGAGCTCTCCCGGCA +
Preference number: 6 (lower is better)
Translates to: GQAEPVPASPPR*PSAGVRRALPA
Trigger: TGCCGGGAGAGCTCGGCGCACTCCCGCACTCGGCCACCGCGGAGGAGAAGCCGGCACGGGCTCTGCCTGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp ATCCGCCGCCCTTCCCGGGCGCCCTACGGGAGTCGCTaGCCGGGAGTCCATTGCAAGCTGCGTCGGCGGCTC +
Preference number: 6 (lower is better)
Translates to: IRRPSRAPYGSR*PGVHCKLRRRL
Trigger: GAGCCGCCGACGCAGCTTGCAATGGACTCCCGGGCAGCGACTCCCGTAGGGCGCCCGGGAAGGGCGGCGGAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp AGAGCCCGTGCCGGCTTCTCCTCCGCGGTGGCCGAGTaGGGGAGTGCGCCGAGCTCTCCCGGCAGTACAGCC +
Preference number: 6 (lower is better)
Translates to: RARAGFSSAVAE*GSAPSSPGSTA
Trigger: GGCTGTACTGCCGGGAGAGCTCGGCGCACTCCCGCACTCGGCCACCGCGGAGGAGAAGCCGGCACGGGCTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 90 bp CCGCCCTTCCCGGGCGCCCTACGGGAGTCGCTGCCCGGGAGTCCATaGCAAGCTGCGTCGGCGGCTCTGGCTGCTGCACCTGCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: PPFPGALRESLPGSP*QAASAALAAAPAGS
Trigger: GGAGCCAGCAGGTGCAGCAGCCAGAGCCGCCGACGCAGCTTGCAATGGACTCCCGGGCAGCGACTCCCGTAGGGCGCCCGGGAAGGGCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 90 bp CCGTCGGGGTCCTGGCGCACTGCGGCGACCGAGTTGACGAAGCCCTaGAAGAGCTCGCGGCGGTGCTGGTGCTGGCTGGGGGACGCGTCG +
Preference number: 6 (lower is better)
Translates to: PSGSWRTAATELTKP*KSSRRCWCWLGDAS
Trigger: CGACGCGTCCCCCAGCCAGCACCAGCACCGCCGCGAGCTCTTCAAGGGCTTCGTCAACTCGGTCGCCGCAGTGCGCCAGGACCCCGACGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS TCA 72 bp TTGTCTGGCAGCACCGACCAGGCGCGGATAGGGCCCTaGTCACGGGCCTCGGGCACCTGCGGGTGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: LSGSTDQARIGP*SRASGTCGCLA
Trigger: GGCCAGGCACCCGCAGGTGCCCGAGGCCCGTGATCAGGGCCCTATCCGCGCCTGGTCGGTGCTGCCAGACAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp CGGGCGCCCTACGGGAGTCGCTGCCCGGGAGTCCATTaGAAGCTGCGTCGGCGGCTCTGGCTGCTGCACCTG +
Preference number: 6 (lower is better)
Translates to: RAPYGSRCPGVH*KLRRRLWLLHL
Trigger: CAGGTGCAGCAGCCAGAGCCGCCGACGCAGCTTGCAATGGACTCCCGGGCAGCGACTCCCGTAGGGCGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 72 bp CCTTCTTCCCGCTCCCTGGAAGCCCCGCGGTCATCCTaGGCAGGCAGAGCCCGTGCCGGCTTCTCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: PSSRSLEAPRSS*AGRARAGFSSA
Trigger: CGCGGAGGAGAAGCCGGCACGGGCTCTGCCTGCCCAGGATGACCGCGGGGCTTCCAGGGAGCGGGAAGAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 72 bp CAGGCGGGGAAGCCCTGCTTGTCGCAGCCTCGACGGTaGCGGGAGGCGAGTGAGCCACTGCAGGCACAGGCG +
Preference number: 6 (lower is better)
Translates to: QAGKPCLSQPRR*REASEPLQAQA
Trigger: CGCCTGTGCCTGCAGTGGCTCACTCGCCTCCCGCCACCGTCGAGGCTGCGACAAGCAGGGCTTCCCCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 72 bp GGCCCTGATCACGGGCCTCGGGCACCTGCGGGTGCCTaGCCACCCACTCTCGAGTGCGCTGCTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: GPDHGPRAPAGA*PPTLECAAAAA
Trigger: AGCAGCAGCAGCAGCGCACTCGAGAGTGGGTGGCCAGGCACCCGCAGGTGCCCGAGGCCCGTGATCAGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 72 bp GTGCCGTCGGGGTCCTGGCGCACTGCGGCGACCGAGTaGACGAAGCCCTTGAAGAGCTCGCGGCGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: VPSGSWRTAATE*TKPLKSSRRCW
Trigger: CCAGCACCGCCGCGAGCTCTTCAAGGGCTTCGTCAACTCGGTCGCCGCAGTGCGCCAGGACCCCGACGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 90 bp GCCGAGTGCGGGAGTGCGCCGAGCTCTCCCGGCAGTACAGCCAGGTaGTTCTGGAGGCATTCCCAGCAGCAGCGGCCCTGCGTCTTCGCC +
Preference number: 6 (lower is better)
Translates to: AECGSAPSSPGSTAR*FWRHSQQQRPCVFA
Trigger: GGCGAAGACGCAGGGCCGCTGCTGCTGGGAATGCCTCCAGAACAACCTGGCTGTACTGCCGGGAGAGCTCGGCGCACTCCCGCACTCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp TGCCGGCTTCTCCTCCGCGGTGGCCGAGTGCGGGAGTaGGCCGAGCTCTCCCGGCAGTACAGCCAGGTTGTT +
Preference number: 6 (lower is better)
Translates to: CRLLLRGGRVRE*AELSRQYSQVV
Trigger: AACAACCTGGCTGTACTGCCGGGAGAGCTCGGCGCACTCCCGCACTCGGCCACCGCGGAGGAGAAGCCGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 72 bp TCCTGGCGCACTGCGGCGACCGAGTTGACGAAGCCCTaGAAGAGCTCGCGGCGGTGCTGGTGCTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: SWRTAATELTKP*KSSRRCWCWLG
Trigger: CCCCAGCCAGCACCAGCACCGCCGCGAGCTCTTCAAGGGCTTCGTCAACTCGGTCGCCGCAGTGCGCCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 90 bp ACGTACTTGGTGCCGTCGGGGTCCTGGCGCACTGCGGCGACCGAGTaGACGAAGCCCTTGAAGAGCTCGCGGCGGTGCTGGTGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: TYLVPSGSWRTAATE*TKPLKSSRRCWCWL
Trigger: CAGCCAGCACCAGCACCGCCGCGAGCTCTTCAAGGGCTTCGTCAACTCGGTCGCCGCAGTGCGCCAGGACCCCGACGGCACCAAGTACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp AGTCTGCGTGAGAGAGGGCGGCTCCGAGGCCGCCCCTaGGCGACTCTAGCCTCTCGCAACGAGTCCTCACAG +
Preference number: 6 (lower is better)
Translates to: SLRERGRLRGRP*ATLASRNESSQ
Trigger: CTGTGAGGACTCGTTGCGAGAGGCTAGAGTCGCGCAGGGGCGGCCTCGGAGCCGCCCTCTCTCACGCAGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 72 bp ACGAAGCCCTTGAAGAGCTCGCGGCGGTGCTGGTGCTaGCTGGGGGACGCGTCGGGGTCTCGGAGAAAGCTC +
Preference number: 6 (lower is better)
Translates to: TKPLKSSRRCWC*LGDASGSRRKL
Trigger: GAGCTTTCTCCGAGACCCCGACGCGTCCCCCAGCCAGCACCAGCACCGCCGCGAGCTCTTCAAGGGCTTCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 72 bp GAGTTGACGAAGCCCTTGAAGAGCTCGCGGCGGTGCTaGTGCTGGCTGGGGGACGCGTCGGGGTCTCGGAGA +
Preference number: 6 (lower is better)
Translates to: ELTKPLKSSRRC*CWLGDASGSRR
Trigger: TCTCCGAGACCCCGACGCGTCCCCCAGCCAGCACCAGCACCGCCGCGAGCTCTTCAAGGGCTTCGTCAACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 90 bp AAGTCCAGTAGTGCCTCCTGGCTCAGCTCTCGGGCCATCGCTGCCTaGTCCTCCGCCCCAGAGGTGTCTGAGTCTCGCCCTCCCGGGGCT +
Preference number: 6 (lower is better)
Translates to: KSSSASWLSSRAIAA*SSAPEVSESRPPGA
Trigger: AGCCCCGGGAGGGCGAGACTCAGACACCTCTGGGGCGGAGGACAAGGCAGCGATGGCCCGAGAGCTGAGCCAGGAGGCACTACTGGACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp TTGACGAAGCCCTTGAAGAGCTCGCGGCGGTGCTGGTaGTGGCTGGGGGACGCGTCGGGGTCTCGGAGAAAG +
Preference number: 6 (lower is better)
Translates to: LTKPLKSSRRCW*WLGDASGSRRK
Trigger: CTTTCTCCGAGACCCCGACGCGTCCCCCAGCCAGCACCAGCACCGCCGCGAGCTCTTCAAGGGCTTCGTCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp CGGGCACCTGCGGGTGCCTGGCCACCCACTCTCGAGTaGGCTGCTGCTGCTGCTGCAGGGTCGAATAATGCA +
Preference number: 6 (lower is better)
Translates to: RAPAGAWPPTLE*AAAAAAGSNNA
Trigger: TGCATTATTCGACCCTGCAGCAGCAGCAGCAGCGCACTCGAGAGTGGGTGGCCAGGCACCCGCAGGTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 72 bp GCGCCGAGCTCTCCCGGCAGTACAGCCAGGTTGTTCTaGAGGCATTCCCAGCAGCAGCGGCCCTGCGTCTTC +
Preference number: 6 (lower is better)
Translates to: APSSPGSTARLF*RHSQQQRPCVF
Trigger: GAAGACGCAGGGCCGCTGCTGCTGGGAATGCCTCCAGAACAACCTGGCTGTACTGCCGGGAGAGCTCGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 72 bp AGTGCCTCCTGGCTCAGCTCTCGGGCCATCGCTGCCTaGTCCTCCGCCCCAGAGGTGTCTGAGTCTCGCCCT +
Preference number: 6 (lower is better)
Translates to: SASWLSSRAIAA*SSAPEVSESRP
Trigger: AGGGCGAGACTCAGACACCTCTGGGGCGGAGGACAAGGCAGCGATGGCCCGAGAGCTGAGCCAGGAGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp CACCACGTACTTGGTGCCGTCGGGGTCCTGGCGCACTaGGGCGACCGAGTTGACGAAGCCCTTGAAGAGCTC +
Preference number: 6 (lower is better)
Translates to: HHVLGAVGVLAH*GDRVDEALEEL
Trigger: GAGCTCTTCAAGGGCTTCGTCAACTCGGTCGCCGCAGTGCGCCAGGACCCCGACGGCACCAAGTACGTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 72 bp GAATTAGGCTCCGTGGAGCCGGGTTCCAAGGGCAGCTaGAGGAAGTTGTCTGGCAGCACCGACCAGGCGCGG +
Preference number: 6 (lower is better)
Translates to: ELGSVEPGSKGS*RKLSGSTDQAR
Trigger: CCGCGCCTGGTCGGTGCTGCCAGACAACTTCCTCCAGCTGCCCTTGGAACCCGGCTCCACGGAGCCTAATTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 72 bp CTGCATCAACCCTTGGGCTGGGTGCCGTTCCTGCCTTaGAGGGCTTCCTGGATCGAGGTGGGCGCCGACTTC +
Preference number: 6 (lower is better)
Translates to: LHQPLGWVPFLP*RASWIEVGADF
Trigger: GAAGTCGGCGCCCACCTCGATCCAGGAAGCCCTCCAAGGCAGGAACGGCACCCAGCCCAAGGGTTGATGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 72 bp CCTGCATCAACCCTTGGGCTGGGTGCCGTTCCTGCCTaGGAGGGCTTCCTGGATCGAGGTGGGCGCCGACTT +
Preference number: 6 (lower is better)
Translates to: PASTLGLGAVPA*EGFLDRGGRRL
Trigger: AAGTCGGCGCCCACCTCGATCCAGGAAGCCCTCCAAGGCAGGAACGGCACCCAGCCCAAGGGTTGATGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS TCA 72 bp GAGAGAGTGCGAGGAAAGACAGGGGTCTGGCGGCTCTaGATTAGGCTCCGTGGAGCCGGGTTCCAAGGGCAG +
Preference number: 6 (lower is better)
Translates to: ERVRGKTGVWRL*IRLRGAGFQGQ
Trigger: CTGCCCTTGGAACCCGGCTCCACGGAGCCTAATTCAGAGCCGCCAGACCCCTGTCTTTCCTCGCACTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 72 bp AAAAGGTCCCTGTATCTCCTCTTGAGCACCACGTACTaGGTGCCGTCGGGGTCCTGGCGCACTGCGGCGACC +
Preference number: 6 (lower is better)
Translates to: KRSLYLLLSTTY*VPSGSWRTAAT
Trigger: GGTCGCCGCAGTGCGCCAGGACCCCGACGGCACCAAGTACGTGGTGCTCAAGAGGAGATACAGGGACCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp CTTCAGAAGCCCCCGGGGAGTCTTTGGGCCCACTGCTaGTCTCCTCACTGCCATCACTCTCCTGGTCCACAA +
Preference number: 6 (lower is better)
Translates to: LQKPPGSLWAHC*SPHCHHSPGPQ
Trigger: TTGTGGACCAGGAGAGTGATGGCAGTGAGGAGAGCAGCAGTGGGCCCAAAGACTCCCCGGGGGCTTCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 90 bp AGTGATAAACCTGCATCAACCCTTGGGCTGGGTGCCGTTCCTGCCTaGGAGGGCTTCCTGGATCGAGGTGGGCGCCGACTTCTTTTCAGC +
Preference number: 6 (lower is better)
Translates to: SDKPASTLGLGAVPA*EGFLDRGGRRLLFS
Trigger: GCTGAAAAGAAGTCGGCGCCCACCTCGATCCAGGAAGCCCTCCAAGGCAGGAACGGCACCCAGCCCAAGGGTTGATGCAGGTTTATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp CCGGGGAGTCTTTGGGCCCACTGCTGCTCTCCTCACTaGCATCACTCTCCTGGTCCACAAAGTCATCCAGAT +
Preference number: 6 (lower is better)
Translates to: PGSLWAHCCSPH*HHSPGPQSHPD
Trigger: ATCTGGATGACTTTGTGGACCAGGAGAGTGATGGCAGTGAGGAGAGCAGCAGTGGGCCCAAAGACTCCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 90 bp TTCAGCAAGCCCTCATCGAGGTACTCCTCATCAGAGGAGGACAATTaGGCTCTCCCTGCCAGAGAGCTCCTCCTGAGGGACCTCCTTAAC +
Preference number: 6 (lower is better)
Translates to: FSKPSSRYSSSEEDN*ALPARELLLRDLLN
Trigger: GTTAAGGAGGTCCCTCAGGAGGAGCTCTCTGGCAGGGAGAGCCAAATTGTCCTCCTCTGATGAGGAGTACCTCGATGAGGGCTTGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS TCA 72 bp GGACAGCTGACAACGAATGCTGCGAAAGACAGTCAATaGAGGGTTCCCCGCCCAGGATTCCCAGGACTCATC +
Preference number: 6 (lower is better)
Translates to: GQLTTNAAKDSQ*RVPRPGFPGLI
Trigger: GATGAGTCCTGGGAATCCTGGGCGGGGAACCCTTCATTGACTGTCTTTCGCAGCATTCGTTGTCAGCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS TCA 72 bp ACAATCCCTGCCTTCTTTGCTCCAGACACCAAGTCCTaGAGGGCCCTGAGGTCACCATGTTTGGCTATCCAG +
Preference number: 6 (lower is better)
Translates to: TIPAFFAPDTKS*RALRSPCLAIQ
Trigger: CTGGATAGCCAAACATGGTGACCTCAGGGCCCTTCAGGACTTGGTGTCTGGAGCAAAGAAGGCAGGGATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS TCA 72 bp CTTTGCACTAGCAATTTGATGACCCCCTGGTGGCCGTaGATGGCTGCAAGGTGCAGCGGGGTATATCCACAA +
Preference number: 6 (lower is better)
Translates to: LCTSNLMTPWWP*MAARCSGVYPQ
Trigger: TTGTGGATATACCCCGCTGCACCTTGCAGCCATTCACGGCCACCAGGGGGTCATCAAATTGCTAGTGCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp AGTCATCCAGATCTTGGAGGGACAGCTGACAACGAATaGTGCGAAAGACAGTCAATGAAGGGTTCCCCGCCC +
Preference number: 6 (lower is better)
Translates to: SHPDLGGTADNE*CERQSMKGSPP
Trigger: GGGCGGGGAACCCTTCATTGACTGTCTTTCGCAGCATTCGTTGTCAGCTGTCCCTCCAAGATCTGGATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 72 bp CAAGTTTTAGTGATAAACCTGCATCAACCCTTGGGCTaGGTGCCGTTCCTGCCTTGGAGGGCTTCCTGGATC +
Preference number: 6 (lower is better)
Translates to: QVLVINLHQPLG*VPFLPWRASWI
Trigger: GATCCAGGAAGCCCTCCAAGGCAGGAACGGCACCCAGCCCAAGGGTTGATGCAGGTTTATCACTAAAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 90 bp GTGCAACGCAGTGTACCCAGTCAAAAAGTCTTTGTGCAAGGCCAGTaGAGGGTCCTCCCAGAACAAAGTCCACACCTGAATCCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: VQRSVPSQKVFVQGQ*RVLPEQSPHLNPGA
Trigger: GGCTCCTGGATTCAGGTGTGGACTTTGTTCTGGGAGGACCCTCAACTGGCCTTGCACAAAGACTTTTTGACTGGGTACACTGCGTTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 72 bp AGCCACTGGCAAGCTTCACAATCCACTCATGCTCCCTaGCATCTAGTGGAACCAGGGATGATTTGTGCTCAG +
Preference number: 6 (lower is better)
Translates to: SHWQASQSTHAP*HLVEPGMICAQ
Trigger: CTGAGCACAAATCATCCCTGGTTCCACTAGATGCCAGGGAGCATGAGTGGATTGTGAAGCTTGCCAGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CCA 72 bp GAATGGCTGCAAGGTGCAGCGGGGTATATCCACAACTaGACCTCACGTTTACATCAAGGACAATCCCTGCCT +
Preference number: 6 (lower is better)
Translates to: EWLQGAAGYIHN*TSRLHQGQSLP
Trigger: AGGCAGGGATTGTCCTTGATGTAAACGTGAGGTCCAGTTGTGGATATACCCCGCTGCACCTTGCAGCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 72 bp GCCATCACTCTCCTGGTCCACAAAGTCATCCAGATCTaGGAGGGACAGCTGACAACGAATGCTGCGAAAGAC +
Preference number: 6 (lower is better)
Translates to: AITLLVHKVIQI*EGQLTTNAAKD
Trigger: GTCTTTCGCAGCATTCGTTGTCAGCTGTCCCTCCAAGATCTGGATGACTTTGTGGACCAGGAGAGTGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp ACAACTGGACCTCACGTTTACATCAAGGACAATCCCTaGCTTCTTTGCTCCAGACACCAAGTCCTGAAGGGC +
Preference number: 6 (lower is better)
Translates to: TTGPHVYIKDNP*LLCSRHQVLKG
Trigger: GCCCTTCAGGACTTGGTGTCTGGAGCAAAGAAGGCAGGGATTGTCCTTGATGTAAACGTGAGGTCCAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS TCA 72 bp TGGTCCACAAAGTCATCCAGATCTTGGAGGGACAGCTaGCAACGAATGCTGCGAAAGACAGTCAATGAAGGG +
Preference number: 6 (lower is better)
Translates to: WSTKSSRSWRDS*QRMLRKTVNEG
Trigger: CCCTTCATTGACTGTCTTTCGCAGCATTCGTTGTCAGCTGTCCCTCCAAGATCTGGATGACTTTGTGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS TCA 72 bp TTAGATACTGCCATGGCTTCTTCCCACTGCTGTCCCTaGCATTTACCCGAGAAGCCAACCTTTGCACTAGCA +
Preference number: 6 (lower is better)
Translates to: LDTAMASSHCCP*HLPEKPTFALA
Trigger: TGCTAGTGCAAAGGTTGGCTTCTCGGGTAAATGTCAGGGACAGCAGTGGGAAGAAGCCATGGCAGTATCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 72 bp AGTGTACCCAGTCAAAAAGTCTTTGTGCAAGGCCAGTaGAGGGTCCTCCCAGAACAAAGTCCACACCTGAAT +
Preference number: 6 (lower is better)
Translates to: SVPSQKVFVQGQ*RVLPEQSPHLN
Trigger: ATTCAGGTGTGGACTTTGTTCTGGGAGGACCCTCAACTGGCCTTGCACAAAGACTTTTTGACTGGGTACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 90 bp AGTGCAGCGAAGGAAGTTTTTCGGGTGACACTTCTAGATATTTCCTaGCTCTTGGCCTTTCTGGTAGGGGAAGAACTTCCAACTAAGGGA +
Preference number: 6 (lower is better)
Translates to: SAAKEVFRVTLLDIS*LLAFLVGEELPTKG
Trigger: TCCCTTAGTTGGAAGTTCTTCCCCTACCAGAAAGGCCAAGAGCAAGGAAATATCTAGAAGTGTCACCCGAAAAACTTCCTTCGCTGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 90 bp TTGGACAGAGAGACCCACCTCAGTCACTATACTCTTCTCTTTCCCTaGGACTGTGGAATTTCTCATACTGGTTGGCCAGTTTCCACTTGT +
Preference number: 6 (lower is better)
Translates to: LDRETHLSHYTLLFP*DCGISHTGWPVSTC
Trigger: ACAAGTGGAAACTGGCCAACCAGTATGAGAAATTCCACAGTCCAAGGGAAAGAGAAGAGTATAGTGACTGAGGTGGGTCTCTCTGTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS GCA 72 bp TGCCATATTTCCCCAGAGGTATTACTGGTTAGATACTaGCATGGCTTCTTCCCACTGCTGTCCCTGACATTT +
Preference number: 6 (lower is better)
Translates to: CHISPEVLLVRY*HGFFPLLSLTF
Trigger: AAATGTCAGGGACAGCAGTGGGAAGAAGCCATGGCAGTATCTAACCAGTAATACCTCTGGGGAAATATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS TCA 72 bp TTCTCATACTGGTTGGCCAGTTTCCACTTGTTGTGCTaGCTTTTGAGTAGTGCAGCGAAGGAAGTTTTTCGG +
Preference number: 6 (lower is better)
Translates to: FSYWLASFHLLC*LLSSAAKEVFR
Trigger: CCGAAAAACTTCCTTCGCTGCACTACTCAAAAGTCAGCACAACAAGTGGAAACTGGCCAACCAGTATGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4
CDS CAA 72 bp AAGGAAGTTTTTCGGGTGACACTTCTAGATATTTCCTaGCTCTTGGCCTTTCTGGTAGGGGAAGAACTTCCA +
Preference number: 6 (lower is better)
Translates to: KEVFRVTLLDIS*LLAFLVGEELP
Trigger: TGGAAGTTCTTCCCCTACCAGAAAGGCCAAGAGCAAGGAAATATCTAGAAGTGTCACCCGAAAAACTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334306.4