RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SORT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134243

Ensembl transcript IDs: ENST00000256637.8, ENST00000466471.1, ENST00000471996.1, ENST00000482236.5, ENST00000483508.5, ENST00000485149.1, ENST00000493736.5, ENST00000495777.5, ENST00000538502.5, ENST00000633956.1

Found 576 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCGCCAGCAGAGCCCAGGGATGGTACCAAGTACACTGTGAGAGCTaGTACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAA +
Preference number: 1 (lower is better)
Translates to: LASRAQGWYQVHCES*YWSWQMPWGRRHAE
Trigger: TTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTATCAGCTCTCACAGTGTACTTGGTACCATCCCTGGGCTCTGCTGGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 90 bp GTTTCGTCTCGCCAGCAGAGCCCAGGGATGGTACCAAGTACACTGTaGGAGCTGATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCA +
Preference number: 1 (lower is better)
Translates to: VSSRQQSPGMVPSTL*ELILELADALGQAP
Trigger: TGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTATCAGCTCTCACAGTGTACTTGGTACCATCCCTGGGCTCTGCTGGCGAGACGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 90 bp GGCTGGCTGTCAGTCTTCAAACCAACAGAGCTAGCCAGCCCGGGGTaGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACT +
Preference number: 1 (lower is better)
Translates to: GWLSVFKPTELASPG*KPGWGGRPISGEST
Trigger: AGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGGTTTGAAGACTGACAGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 90 bp GTCTTCAAACCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATaGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCACTCTTG +
Preference number: 1 (lower is better)
Translates to: VFKPTELASPGWKPG*GGRPISGESTPALL
Trigger: CAAGAGTGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGGTTTGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 90 bp TACCCTGGGGTGGGTATGGATGGCCCTGGGCTCCCCTCCGTATCCTaGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGAC +
Preference number: 1 (lower is better)
Translates to: YPGVGMDGPGLPSVS*YRDEGHENQLWFTD
Trigger: GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGAGGGGAGCCCAGGGCCATCCATACCCACCCCAGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 90 bp AGGTGGCCAGCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTaGGCATGGAGAGGCCCAGAGGCAAGCATCAGAGCAAGAGAGAGG +
Preference number: 1 (lower is better)
Translates to: RWPAHYQPVKDERPP*AWRGPEASIRARER
Trigger: CCTCTCTCTTGCTCTGATGCTTGCCTCTGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGCTGGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 90 bp AGCTACCTGAGCTGGACAAACCCATGGCAGACAGAACAGAAAGTCTaGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCATCACACAGC +
Preference number: 1 (lower is better)
Translates to: SYLSWTNPWQTEQKV*HLLTPALPVTSSHS
Trigger: GCTGTGTGATGAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGCCATGGGTTTGTCCAGCTCAGGTAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 90 bp CCCTCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTaGTTTACAGACTCGATGCAGGAGCTGGAGGTGGCCAGCACATTA +
Preference number: 1 (lower is better)
Translates to: PSVSWYRDEGHENQL*FTDSMQELEVASTL
Trigger: TAATGTGCTGGCCACCTCCAGCTCCTGCATCGAGTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 90 bp AGGTGGGCCAAATCATCAGGGAACAGTCAGTCACCCGCTTGTGGCTaGGGGCATGCGGAGGATGAGAACTACATTAAGGATCTGGGGCAT +
Preference number: 1 (lower is better)
Translates to: RWAKSSGNSQSPACG*GHAEDENYIKDLGH
Trigger: ATGCCCCAGATCCTTAATGTAGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTGATGATTTGGCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 90 bp TTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATaGACTCTCCTGAGCCCGCCCCCAGAACTGCCGCAACTCTCCAAA +
Preference number: 1 (lower is better)
Translates to: FRGRRRFYVPVTADL*TLLSPPPELPQLSK
Trigger: TTTGGAGAGTTGCGGCAGTTCTGGGGGCGGGCTCAGGAGAGTCCATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 90 bp CGAGGGGCTACACTGACAATGAGCAGGATGCACTCTAGGTCATTGTaGACAGGCACGGAGCTCTTGAGAGCACTGCTCAAAGGAAAGAGG +
Preference number: 1 (lower is better)
Translates to: RGATLTMSRMHSRSL*TGTELLRALLKGKR
Trigger: CCTCTTTCCTTTGAGCAGTGCTCTCAAGAGCTCCGTGCCTGTCCACAATGACCTAGAGTGCATCCTGCTCATTGTCAGTGTAGCCCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 90 bp AAGGCCATGAGAACCAGCTCTGGTTTACAGACTCGATGCAGGAGCTaGAGGTGGCCAGCACATTACCAGCCTGTCAAGGATGAAAGACCA +
Preference number: 1 (lower is better)
Translates to: KAMRTSSGLQTRCRS*RWPAHYQPVKDERP
Trigger: TGGTCTTTCATCCTTGACAGGCTGGTAATGTGCTGGCCACCTCCAGCTCCTGCATCGAGTCTGTAAACCAGAGCTGGTTCTCATGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 90 bp AGGGAGACCCATCAGTGGAGAGTCCACTCCTGCACTCTTGAGCAGTaGCCCTCAATGAGGGGAGGGGCAGTTTCTGCAAACGTATTTAAA +
Preference number: 1 (lower is better)
Translates to: RETHQWRVHSCTLEQ*PSMRGGAVSANVFK
Trigger: TTTAAATACGTTTGCAGAAACTGCCCCTCCCCTCATTGAGGGTCACTGCTCAAGAGTGCAGGAGTGGACTCTCCACTGATGGGTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 90 bp GACGTAGATTCTACGTTCCAGTTACGGCTGATCTATGGACTCTCCTaGGCCCGCCCCCAGAACTGCCGCAACTCTCCAAAGGCTTTTATT +
Preference number: 1 (lower is better)
Translates to: DVDSTFQLRLIYGLS*ARPQNCRNSPKAFI
Trigger: AATAAAAGCCTTTGGAGAGTTGCGGCAGTTCTGGGGGCGGGCTCAGGAGAGTCCATAGATCAGCCGTAACTGGAACGTAGAATCTACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 90 bp GCTGGACAAACCCATGGCAGACAGAACAGAAAGTCTGGCACCTGCTaGCTCCGGCCCTCCCTGTCACTTCATCACACAGCAAATCTTAAA +
Preference number: 1 (lower is better)
Translates to: AGQTHGRQNRKSGTC*LRPSLSLHHTANLK
Trigger: TTTAAGATTTGCTGTGTGATGAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGCCATGGGTTTGTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR GCA 90 bp CCTACAGGAGAGACGGGCCTGGTCTGTGGTCTCACTAAAGCCCAATaGCCAATTAGGTCCAGAGAAGAAAGAAGAGTGAGTTCCCTACCT +
Preference number: 1 (lower is better)
Translates to: PTGETGLVCGLTKAQ*PIRSREERRVSSLP
Trigger: AGGTAGGGAACTCACTCTTCTTTCTTCTCTGGACCTAATTGGGCATTGGGCTTTAGTGAGACCACAGACCAGGCCCGTCTCTCCTGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 90 bp CTCAAAGTGGTTAGCACTCGCATGTGTAAAGATTTCCAAGAGTTCTaGAGACAGCCAGCCAGCACTGCTTATCACACACACGGGGACCCT +
Preference number: 1 (lower is better)
Translates to: LKVVSTRMCKDFQEF*RQPASTAYHTHGDP
Trigger: AGGGTCCCCGTGTGTGTGATAAGCAGTGCTGGCTGGCTGTCTTCAGAACTCTTGGAAATCTTTACACATGCGAGTGCTAACCACTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR GCA 90 bp CTGAGATCATCAAACACATGCTTTGCTTCTGCGCAGCCCAACTTCTaGAAGCGCTCAAGAGTTAATTACTCCTTCACCTTCCTGGGGCCT +
Preference number: 1 (lower is better)
Translates to: LRSSNTCFASAQPNF*KRSRVNYSFTFLGP
Trigger: AGGCCCCAGGAAGGTGAAGGAGTAATTAACTCTTGAGCGCTTGCAGAAGTTGGGCTGCGCAGAAGCAAAGCATGTGTTTGATGATCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471996.1
3UTR CCA 90 bp TGTCATGATTTAGCAACGAGCCACACGACAGTTAAGAAGGGAACATaGAAGACTGTGAGGTTCCGTCTTCGGGGGTTCACACTGTGTACC +
Preference number: 1 (lower is better)
Translates to: CHDLATSHTTVKKGT*KTVRFRLRGFTLCT
Trigger: GGTACACAGTGTGAACCCCCGAAGACGGAACCTCACAGTCTTCCATGTTCCCTTCTTAACTGTCGTGTGGCTCGTTGCTAAATCATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 90 bp TCACTAAAGCCCAATGCCCAATTAGGTCCAGAGAAGAAAGAAGAGTaGGTTCCCTACCTGGATTTAAGAACTCGGACCACTTTGGACTGG +
Preference number: 1 (lower is better)
Translates to: SLKPNAQLGPEKKEE*VPYLDLRTRTTLDW
Trigger: CCAGTCCAAAGTGGTCCGAGTTCTTAAATCCAGGTAGGGAACTCACTCTTCTTTCTTCTCTGGACCTAATTGGGCATTGGGCTTTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR GCA 90 bp ATCCCTGTCATAAAGAACAGCAAGTCATCTACAAGAAGGCAGCCTTaGTCAAAGTGGTTAGCACTCGCATGTGTAAAGATTTCCAAGAGT +
Preference number: 1 (lower is better)
Translates to: IPVIKNSKSSTRRQP*SKWLALACVKISKS
Trigger: ACTCTTGGAAATCTTTACACATGCGAGTGCTAACCACTTTGAGCAAGGCTGCCTTCTTGTAGATGACTTGCTGTTCTTTATGACAGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 90 bp ATAAAGAACAGCAAGTCATCTACAAGAAGGCAGCCTTGCTCAAAGTaGTTAGCACTCGCATGTGTAAAGATTTCCAAGAGTTCTGAAGAC +
Preference number: 1 (lower is better)
Translates to: IKNSKSSTRRQPCSK*LALACVKISKSSED
Trigger: GTCTTCAGAACTCTTGGAAATCTTTACACATGCGAGTGCTAACCACTTTGAGCAAGGCTGCCTTCTTGTAGATGACTTGCTGTTCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 90 bp CTTGTGGCTGAGGGCATGCGGAGGATGAGAACTACATTAAGGATCTaGGGCATAGCAATAAATCATTACCATGTACACTATACAGTTTAT +
Preference number: 1 (lower is better)
Translates to: LVAEGMRRMRTTLRI*GIAINHYHVHYTVY
Trigger: ATAAACTGTATAGTGTACATGGTAATGATTTATTGCTATGCCCCAGATCCTTAATGTAGTTCTCATCCTCCGCATGCCCTCAGCCACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 90 bp ACTCCATCCCAAGAACATTGTGAGGTTCAAATGACATTATGTGAGTaGAGGTGCTCTGAAAATTTGCCAAGTTCCACAGAAATCCCAGAT +
Preference number: 1 (lower is better)
Translates to: TPSQEHCEVQMTLCE*RCSENLPSSTEIPD
Trigger: ATCTGGGATTTCTGTGGAACTTGGCAAATTTTCAGAGCACCTTCACTCACATAATGTCATTTGAACCTCACAATGTTCTTGGGATGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR GCA 90 bp ATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTaGTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTTTT +
Preference number: 1 (lower is better)
Translates to: IMLNSIAEASRNDLF*YIKPGSLHNDTLCF
Trigger: AAAACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGACTGGAGTTGGCAGATaGCCTGGGGCAGGCGCCATG +
Preference number: 2 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLTGVGR*PGAGAM
Trigger: CATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGT...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCTGGGGTGGGTATGGATaGCCCTGGGCTCCCCTCCGT +
Preference number: 2 (lower is better)
Translates to: ADRTESLAPADSGPPCHFWGGYG*PWAPLR
Trigger: ACGGAGGGGAGCCCAGGGCCATCCATACCCACCCCA...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCACAGCCAGCCAGCACTaGTTATCACACACACGGGGA +
Preference number: 2 (lower is better)
Translates to: PTELASPGWKPGWGGRPITASQH*LSHTRG
Trigger: TCCCCGTGTGTGTGATAAGCAGTGCTGGCTGGCTGT...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCCCCACAGTGAGTACATaGTGGGAGAAAGGTGAGTGG +
Preference number: 2 (lower is better)
Translates to: PTELASPGWKPGWGGRPIPTVST*WEKGEW
Trigger: CCACTCACCTTTCTCCCAGCATGTACTCACTGTGGG...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCAGTTGGCAGATGCCCTaGGGCAGGCGCCATGCAGAA +
Preference number: 2 (lower is better)
Translates to: ADRTESLAPADSGPPCHFSWQMP*GRRHAE
Trigger: TTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACT...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTGCTCCTAGAGCTACCTaGGCTGGACAAACCCATGGC +
Preference number: 2 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTAPRAT*AGQTHG
Trigger: GCCATGGGTTTGTCCAGCTCAGGTAGCTCTAGGAGC...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAACTGGAGTTGGCAGATaGCCTGGGGCAGGCGCCATG +
Preference number: 2 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPTGVGR*PGAGAM
Trigger: CATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGT...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCCCCTGTAAGTTTTCCTaGTGTACTGTGTGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: PTELASPGWKPGWGGRPIPCKFS*CTVWEA
Trigger: TGCTTCCCACACAGTACATCAGGAAAACTTACAGGG...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTGAACATGGAAGACTGTaGGGTTCCGTCTTCGGGGGT +
Preference number: 2 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTEHGRL*GSVFGG
Trigger: ACCCCCGAAGACGGAACCTCACAGTCTTCCATGTTC...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAAAGCAGTGACCCTCAATaGGGGGAGGGGCAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQSSDPQ*GEGQFL
Trigger: CAGAAACTGCCCCTCCCCTCATTGAGGGTCACTGCT...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGATCTATGGACTCTCCTaGGCCCGCCCCCAGAACTGC +
Preference number: 2 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRIYGLS*ARPQNC
Trigger: GCAGTTCTGGGGGCGGGCTCAGGAGAGTCCATAGAT...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCCAGGAGAGACGGGCCTaGTCTGTGGTCTCACTAAAG +
Preference number: 2 (lower is better)
Translates to: ADRTESLAPADSGPPCHFQERRA*SVVSLK
Trigger: CTTTAGTGAGACCACAGACCAGGCCCGTCTCTCCTG...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAATGCAGGAGCTGGAGGTaGCCAGCACATTACCAGCCT +
Preference number: 2 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQCRSWR*PAHYQP
Trigger: AGGCTGGTAATGTGCTGGCCACCTCCAGCTCCTGCA...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCGGTGTGCAGTGTTCTTaGAGTAGGACTGTCCCCAGA +
Preference number: 2 (lower is better)
Translates to: ADRTESLAPADSGPPCHFGVQCS*SRTVPR
Trigger: TCTGGGGACAGTCCTACTCCAAGAACACTGCACACC...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCAGCCTTGCTCAAAGTaGTTAGCACTCGCATGTGTA +
Preference number: 2 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLQPCSK*LALACV
Trigger: TACACATGCGAGTGCTAACCACTTTGAGCAAGGCTG...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCCTGGGGCAGGCGCCATaGAGAACACACAGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: VYPTINSREEIIQPGQTSLGQAP*RTHRSG
Trigger: CCCACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAG...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCAGTTGGCAGATGCCCTaGGGCAGGCGCCATGCAGAA +
Preference number: 2 (lower is better)
Translates to: YPTINSREEIIQPGQTSSSWQMP*GRRHAE
Trigger: TTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACT...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAAAGCAGAGCCCAGGGATaGTACCAAGTACACTGTGAG +
Preference number: 2 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQSRAQG*YQVHCE
Trigger: CTCACAGTGTACTTGGTACCATCCCTGGGCTCTGCT...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCATCTGTGTGAGGAGCTaGTGTGCAGTGTTCTTGGAG +
Preference number: 2 (lower is better)
Translates to: ADRTESLAPADSGPPCHFICVRS*CAVFLE
Trigger: CTCCAAGAACACTGCACACCAGCTCCTCACACAGAT...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCAGCTGTTAATCCATTCTaGGGAGGAGAGAACTTAGCC +
Preference number: 2 (lower is better)
Translates to: GWKPGWGGRPISGESTPAAVNPF*GGENLA
Trigger: GGCTAAGTTCTCTCCTCCCCAGAATGGATTAACAGC...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAGTACCAAATTCACTTTaGGCAGGAGGGAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPVPNSL*AGGRVG
Trigger: CCCCACCCTCCCTCCTGCCCAAAGTGAATTTGGTAC...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCATGCATCTGCCCACAGTaGGTACATGCTGGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPCICPQ*VHAGRK
Trigger: CTTTCTCCCAGCATGTACTCACTGTGGGCAGATGCA...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCTTTGTACCCTGTCCTTaGGTAAGTCTACTGGCACAC +
Preference number: 2 (lower is better)
Translates to: ADRTESLAPADSGPPCHFFVPCP*VSLLAH
Trigger: GTGTGCCAGTAGACTTACGCAAGGACAGGGTACAAA...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCACAAGAAGGCAGCCTTaGTCAAAGTGGTTAGCACTC +
Preference number: 2 (lower is better)
Translates to: ADRTESLAPADSGPPCHFTRRQP*SKWLAL
Trigger: GAGTGCTAACCACTTTGAGCAAGGCTGCCTTCTTGT...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGGGTGTGCAGTGTTCTTaGAGTAGGACTGTCCCCAGA +
Preference number: 2 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRGVQCS*SRTVPR
Trigger: TCTGGGGACAGTCCTACTCCAAGAACACTGCACACC...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTAGAGATCATTCAGCCTaGGCAGACTTCCAGCTAAGT +
Preference number: 2 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTRDHSA*ADFQLS
Trigger: ACTTAGCTGGAAGTCTGCCCAGGCTGAATGATCTCT...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAAGAGAATGAGCCAGGCTaGCTGTCAGTCTTCAAACCA +
Preference number: 2 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQENEPG*LSVFKP
Trigger: TGGTTTGAAGACTGACAGCCAGCCTGGCTCATTCTC...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCGGCTTTCTTACTCTCTaGCTGAGGGCACACATTTGT +
Preference number: 2 (lower is better)
Translates to: ADRTESLAPADSGPPCHFGFLTL*LRAHIC
Trigger: ACAAATGTGTGCCCTCAGCCAGAGAGTAAGAAAGCC...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCCACTTCCAAGTATCCTaGATGAATATAGGGGCGAGG +
Preference number: 2 (lower is better)
Translates to: ADRTESLAPADSGPPCHFHFQVS*MNIGAR
Trigger: CCTCGCCCCTATATTCATCCAGGATACTTGGAAGTG...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGGTACACTGTGAGAGCTaGTACTGGAGTTGGCAGATG +
Preference number: 2 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRVHCES*YWSWQM
Trigger: CATCTGCCAACTCCAGTATCAGCTCTCACAGTGTAC...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACGAACATGGAAGACTGTaGGGTTCCGTCTTCGGGGGT +
Preference number: 2 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDEHGRL*GSVFGG
Trigger: ACCCCCGAAGACGGAACCTCACAGTCTTCCATGTTC...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTTGCACTCTTGAGCAGTaGCCCTCAATGAGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSCTLEQ*PSMRGG
Trigger: CCCTCCCCTCATTGAGGGTCACTGCTCAAGAGTGCA...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAATTTGTACCCTGTCCTTaGGTAAGTCTACTGGCACAC +
Preference number: 2 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQFVPCP*VSLLAH
Trigger: GTGTGCCAGTAGACTTACGCAAGGACAGGGTACAAA...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGATCTGTGTGAGGAGCTaGTGTGCAGTGTTCTTGGAG +
Preference number: 2 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRICVRS*CAVFLE
Trigger: CTCCAAGAACACTGCACACCAGCTCCTCACACAGAT...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACAGGGAGACCCATCAGTaGAGAGTCCACTCCTGCACT +
Preference number: 2 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDRETHQ*RVHSCT
Trigger: AGTGCAGGAGTGGACTCTCCACTGATGGGTCTCCCT...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAACTGGGTCCCTCGCAATaGGAAATTTATTTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQLGPSQ*EIYFLK
Trigger: CTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAG...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGAGAGATCATTCAGCCTaGGCAGACTTCCAGCTAAGT +
Preference number: 2 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRRDHSA*ADFQLS
Trigger: ACTTAGCTGGAAGTCTGCCCAGGCTGAATGATCTCT...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGAAGCATCATCTAGACTaGAAGTGTGTTTTCAATTGG +
Preference number: 2 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLKHHLD*KCVFNW
Trigger: CCAATTGAAAACACACTTCCAGTCTAGATGATGCTT...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAGAACTCGGACCACTTTaGACTGGTTTGTCCAATCTC +
Preference number: 2 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPELGPL*TGLSNL
Trigger: GAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTC...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CAA 90 bp ATGAGCAGGATGCACTCTAGGTCATTGTGGACAGGCACGGAGCTCTaGAGAGCACTGCTCAAAGGAAAGAGGGAATCTCTATCTGGATGG +
Preference number: 2 (lower is better)
Translates to: MSRMHSRSLWTGTEL*RALLKGKRESLSGW
Trigger: CCATCCAGATAGAGATTCCCTCTTTCCTTTGAGCAGTGCTCTCAAGAGCTCCGTGCCTGTCCACAATGACCTAGAGTGCATCCTGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTACACAAAGCACAGCTTaGAAAATCTCAGAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTTQSTA*KISEEA
Trigger: TGCTTCTTCTGAGATTTTTCAAGCTGTGCTTTGTGT...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTCCCACAGTGAGTACATaGTGGGAGAAAGGTGAGTGG +
Preference number: 2 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSPTVST*WEKGEW
Trigger: CCACTCACCTTTCTCCCAGCATGTACTCACTGTGGG...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAAGGTGCTCTGAAAATTTaGCAAGTTCCACAGAAATCC +
Preference number: 2 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQGALKI*QVPQKS
Trigger: GGATTTCTGTGGAACTTGGCAAATTTTCAGAGCACC...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGCGGACCACTTTGGACTaGTTTGTCCAATCTCTCTTA +
Preference number: 2 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRRTTLD*FVQSLL
Trigger: TAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCG...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCAGGTCCTTTTGGCTTTaGTGGAAGCAGCAGAAACAG +
Preference number: 2 (lower is better)
Translates to: YPTINSREEIIQPGQTSSRSFWL*WKQQKQ
Trigger: CTGTTTCTGCTGCTTCCATCAAAGCCAAAAGGACCT...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp TCGGGGGTTCACACTGTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGGTACACTGTGAGAGCTaGTACTGGAGTTGGCAGATG +
Preference number: 2 (lower is better)
Translates to: SGVHTVYPTINSREEIIQVHCES*YWSWQM
Trigger: CATCTGCCAACTCCAGTATCAGCTCTCACAGTGTAC...CTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACACAGTGTGAACCCCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACGTACCAAGTACACTGTaGGAGCTGATACTGGAGTTG +
Preference number: 2 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDVPSTL*ELILEL
Trigger: CAACTCCAGTATCAGCTCTCACAGTGTACTTGGTAC...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTATCCCAAGAACATTGTaGGGTTCAAATGACATTATG +
Preference number: 2 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTIPRTL*GSNDIM
Trigger: CATAATGTCATTTGAACCTCACAATGTTCTTGGGAT...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGGGTGCTCTGAAAATTTaGCAAGTTCCACAGAAATCC +
Preference number: 2 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRGALKI*QVPQKS
Trigger: GGATTTCTGTGGAACTTGGCAAATTTTCAGAGCACC...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAAACTGGTGTGAAGAAATaGATACTGCAAGTTGTTTCG +
Preference number: 2 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQTGVKK*ILQVVS
Trigger: CGAAACAACTTGCAGTATGCATTTCTTCACACCAGT...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTAGGTCCTTTTGGCTTTaGTGGAAGCAGCAGAAACAG +
Preference number: 2 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSRSFWL*WKQQKQ
Trigger: CTGTTTCTGCTGCTTCCATCAAAGCCAAAAGGACCT...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp TCGGGGGTTCACACTGTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCCTGTAAGTTTTCCTaGTGTACTGTGTGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: SGVHTVYPTINSREEIIQPCKFS*CTVWEA
Trigger: TGCTTCCCACACAGTACATCAGGAAAACTTACAGGG...CTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACACAGTGTGAACCCCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GAAGTCCATTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATAGCAGAGCCCAGGGATaGTACCAAGTACACTGTGAG +
Preference number: 2 (lower is better)
Translates to: EVHSEADVDSTFQLRLIYSRAQG*YQVHCE
Trigger: CTCACAGTGTACTTGGTACCATCCCTGGGCTCTGCT...ATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAATGGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACACAGTGAGTACATGCTaGGAGAAAGGTGAGTGGTAT +
Preference number: 2 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDTVSTC*EKGEWY
Trigger: ATACCACTCACCTTTCTCCCAGCATGTACTCACTGT...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGTTCTGTTCACCAAGGTaGCAAAAAGGTGCTAAATAC +
Preference number: 2 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRFCSPR*QKGAKY
Trigger: GTATTTAGCACCTTTTTGCCACCTTGGTGAACAGAA...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGATTGTGAGGTTCAAATaGCATTATGTGAGTGAAGGT +
Preference number: 2 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRIVRFK*HYVSEG
Trigger: ACCTTCACTCACATAATGTCATTTGAACCTCACAAT...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAATTGTGAGGTTCAAATaGCATTATGTGAGTGAAGGT +
Preference number: 2 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPIVRFK*HYVSEG
Trigger: ACCTTCACTCACATAATGTCATTTGAACCTCACAAT...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp GAAGTCCATTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATGATTTCCAAGAGTTCTaGAGACAGCCAGCCAGCACT +
Preference number: 2 (lower is better)
Translates to: EVHSEADVDSTFQLRLIYDFQEF*RQPAST
Trigger: AGTGCTGGCTGGCTGTCTTCAGAACTCTTGGAAATC...ATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAATGGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp TTTAAGAACTCGGACCACTTTGGACTGGTTTGTCCAATCTCTCTTATAATGCTACTGGGGCAGGCGCCATaGAGAACACACAGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: FKNSDHFGLVCPISLIMLLGQAP*RTHRSG
Trigger: CCCACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAG...TAGCATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGAAGCATCATCTAGACTaGAAGTGTGTTTTCAATTGG +
Preference number: 2 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRKHHLD*KCVFNW
Trigger: CCAATTGAAAACACACTTCCAGTCTAGATGATGCTT...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCACACAAAGCACAGCTTaGAAAATCTCAGAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: VYPTINSREEIIQPGQTSTQSTA*KISEEA
Trigger: TGCTTCTTCTGAGATTTTTCAAGCTGTGCTTTGTGT...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp GAAGTCCATTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATACAAGAAGGCAGCCTTaGTCAAAGTGGTTAGCACTC +
Preference number: 2 (lower is better)
Translates to: EVHSEADVDSTFQLRLIYTRRQP*SKWLAL
Trigger: GAGTGCTAACCACTTTGAGCAAGGCTGCCTTCTTGT...ATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAATGGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAAAAGAAAAATCACTGTaGTCTGTGGTCTCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPKEKSL*SVVSEK
Trigger: TTTTTCAGAGACCACAGACCACAGTGATTTTTCTTT...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTCCACTCCTGCACTCTTaGGCAGTGACCCTCAATGAG +
Preference number: 2 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCPLLHS*AVTLNE
Trigger: CTCATTGAGGGTCACTGCTCAAGAGTGCAGGAGTGG...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CAA 90 bp GATCCCTGTCATAAAGAACAGCAAGTCATCTACAAGAAGGCAGCCTaGCTCAAAGTGGTTAGCACTCGCATGTGTAAAGATTTCCAAGAG +
Preference number: 2 (lower is better)
Translates to: DPCHKEQQVIYKKAA*LKVVSTRMCKDFQE
Trigger: CTCTTGGAAATCTTTACACATGCGAGTGCTAACCACTTTGAGCAAGGCTGCCTTCTTGTAGATGACTTGCTGTTCTTTATGACAGGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCTGCATCTGCCCACAGTaGGTACATGCTGGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCCICPQ*VHAGRK
Trigger: CTTTCTCCCAGCATGTACTCACTGTGGGCAGATGCA...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp TTTAAGAACTCGGACCACTTTGGACTGGTTTGTCCAATCTCTCTTATAATGCTACAGCAGAAACAGAGCTaGGTCCCTCGCAATGGGAAA +
Preference number: 2 (lower is better)
Translates to: FKNSDHFGLVCPISLIMLQQKQS*VPRNGK
Trigger: TTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGCTG...TAGCATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCCAGCAGAAACAGAGCTaGGTCCCTCGCAATGGGAAA +
Preference number: 2 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCQQKQS*VPRNGK
Trigger: TTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGCTG...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CAA 90 bp ACCCTGTCCTTGCGTAAGTCTACTGGCACACACACAAAGCACAGCTaGAAAAATCTCAGAAGAAGCAAGAGTTCTCTTTTAATAGGTGCT +
Preference number: 2 (lower is better)
Translates to: TLSLRKSTGTHTKHS*KNLRRSKSSLLIGA
Trigger: AGCACCTATTAAAAGAGAACTCTTGCTTCTTCTGAGATTTTTCAAGCTGTGCTTTGTGTGTGTGCCAGTAGACTTACGCAAGGACAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp TTTAAGAACTCGGACCACTTTGGACTGGTTTGTCCAATCTCTCTTATAATGCTAAGGCAGCCATTGTCATaGTTTAGCAACGAGCCACAC +
Preference number: 2 (lower is better)
Translates to: FKNSDHFGLVCPISLIMLRQPLS*FSNEPH
Trigger: GTGTGGCTCGTTGCTAAATCATGACAATGGCTGCCT...TAGCATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR GCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCTGTGAGGAGCTGGTGTaGAGTGTTCTTGGAGTAGGA +
Preference number: 2 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCCEELV*SVLGVG
Trigger: TCCTACTCCAAGAACACTGCACACCAGCTCCTCACA...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp GAAGTCCATTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATTCCTACGTCTTAAAATaGGTAAGAGGATTACCATGT +
Preference number: 2 (lower is better)
Translates to: EVHSEADVDSTFQLRLIYSYVLK*VRGLPC
Trigger: ACATGGTAATCCTCTTACTCATTTTAAGACGTAGGA...ATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAATGGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTGCTGTTAATCCATTCTaGGGAGGAGAGAACTTAGCC +
Preference number: 2 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCAVNPF*GGENLA
Trigger: GGCTAAGTTCTCTCCTCCCCAGAATGGATTAACAGC...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp GAAGTCCATTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATGAGCCCTATCGTATATaGTTAGAGAAGAATATTGAG +
Preference number: 2 (lower is better)
Translates to: EVHSEADVDSTFQLRLIYEPYRI*LEKNIE
Trigger: CTCAATATTCTTCTCTAACCATATACGATAGGGCTC...ATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAATGGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCACAGTGAGTACATGCTaGGAGAAAGGTGAGTGGTAT +
Preference number: 2 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCTVSTC*EKGEWY
Trigger: ATACCACTCACCTTTCTCCCAGCATGTACTCACTGT...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTTCCTACGTCTTAAAATaGGTAAGAGGATTACCATGT +
Preference number: 2 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCSYVLK*VRGLPC
Trigger: ACATGGTAATCCTCTTACTCATTTTAAGACGTAGGA...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR TCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCATCCCAAGAACATTGTaGGGTTCAAATGACATTATG +
Preference number: 2 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCIPRTL*GSNDIM
Trigger: CATAATGTCATTTGAACCTCACAATGTTCTTGGGAT...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CCA 90 bp TTTAAGAACTCGGACCACTTTGGACTGGTTTGTCCAATCTCTCTTATAATGCTAGAGCCCTATCGTATATaGTTAGAGAAGAATATTGAG +
Preference number: 2 (lower is better)
Translates to: FKNSDHFGLVCPISLIMLEPYRI*LEKNIE
Trigger: CTCAATATTCTTCTCTAACCATATACGATAGGGCTC...TAGCATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CAA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCGAGCTGATACTGGAGTaGGCAGATGCCCTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: PTELASPGWKPGWGGRPIELILE*ADALGQ
Trigger: CTGCCCCAGGGCATCTGCCAACTCCAGTATCAGCTC...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 72 bp GTGGGTATGGATGGCCCTGGGCTCCCCTCCGTATCCTaGTATCGTGACGAAGGCCATGAGAACCAGCTCTGG +
Preference number: 3 (lower is better)
Translates to: VGMDGPGLPSVS*YRDEGHENQLW
Trigger: CCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGAGGGGAGCCCAGGGCCATCCATACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 72 bp AGAGCCCAGGGATGGTACCAAGTACACTGTGAGAGCTaGTACTGGAGTTGGCAGATGCCCTGGGGCAGGCGC +
Preference number: 3 (lower is better)
Translates to: RAQGWYQVHCES*YWSWQMPWGRR
Trigger: GCGCCTGCCCCAGGGCATCTGCCAACTCCAGTATCAGCTCTCACAGTGTACTTGGTACCATCCCTGGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 72 bp CGCCAGCAGAGCCCAGGGATGGTACCAAGTACACTGTaGGAGCTGATACTGGAGTTGGCAGATGCCCTGGGG +
Preference number: 3 (lower is better)
Translates to: RQQSPGMVPSTL*ELILELADALG
Trigger: CCCCAGGGCATCTGCCAACTCCAGTATCAGCTCTCACAGTGTACTTGGTACCATCCCTGGGCTCTGCTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CAA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCTACAAGAAGGCAGCCTaGCTCAAAGTGGTTAGCACT +
Preference number: 3 (lower is better)
Translates to: PTELASPGWKPGWGGRPIYKKAA*LKVVST
Trigger: AGTGCTAACCACTTTGAGCAAGGCTGCCTTCTTGTA...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 72 bp GGAGACCCATCAGTGGAGAGTCCACTCCTGCACTCTTaGGCAGTGACCCTCAATGAGGGGAGGGGCAGTTTC +
Preference number: 3 (lower is better)
Translates to: GDPSVESPLLHS*AVTLNEGRGSF
Trigger: GAAACTGCCCCTCCCCTCATTGAGGGTCACTGCTCAAGAGTGCAGGAGTGGACTCTCCACTGATGGGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 72 bp TCTACGTTCCAGTTACGGCTGATCTATGGACTCTCCTaGGCCCGCCCCCAGAACTGCCGCAACTCTCCAAAG +
Preference number: 3 (lower is better)
Translates to: STFQLRLIYGLS*ARPQNCRNSPK
Trigger: CTTTGGAGAGTTGCGGCAGTTCTGGGGGCGGGCTCAGGAGAGTCCATAGATCAGCCGTAACTGGAACGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 72 bp ACCCATGGCAGACAGAACAGAAAGTCTGGCACCTGCTaGCTCCGGCCCTCCCTGTCACTTCATCACACAGCA +
Preference number: 3 (lower is better)
Translates to: THGRQNRKSGTC*LRPSLSLHHTA
Trigger: TGCTGTGTGATGAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGCCATGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 72 bp TCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTaGTTTACAGACTCGATGCAGGAGCTGGAGGTGGCC +
Preference number: 3 (lower is better)
Translates to: SWYRDEGHENQL*FTDSMQELEVA
Trigger: GGCCACCTCCAGCTCCTGCATCGAGTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CAA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCGAGGATTACCATGTATaGGTGCATCTGCCCACAGTG +
Preference number: 3 (lower is better)
Translates to: ADRTESLAPADSGPPCHFEDYHV*VHLPTV
Trigger: CACTGTGGGCAGATGCACCAATACATGGTAATCCTC...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 72 bp CATCAGTGGAGAGTCCACTCCTGCACTCTTGAGCAGTaGCCCTCAATGAGGGGAGGGGCAGTTTCTGCAAAC +
Preference number: 3 (lower is better)
Translates to: HQWRVHSCTLEQ*PSMRGGAVSAN
Trigger: GTTTGCAGAAACTGCCCCTCCCCTCATTGAGGGTCACTGCTCAAGAGTGCAGGAGTGGACTCTCCACTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 72 bp GCTCTGCTAGGGCAGGATGGTGCTCCTAGAGCTACCTaGGCTGGACAAACCCATGGCAGACAGAACAGAAAG +
Preference number: 3 (lower is better)
Translates to: ALLGQDGAPRAT*AGQTHGRQNRK
Trigger: CTTTCTGTTCTGTCTGCCATGGGTTTGTCCAGCTCAGGTAGCTCTAGGAGCACCATCCTGCCCTAGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR GCA 72 bp AAGTACACTGTGAGAGCTGATACTGGAGTTGGCAGATaGCCTGGGGCAGGCGCCATGCAGAACACACAGAAG +
Preference number: 3 (lower is better)
Translates to: KYTVRADTGVGR*PGAGAMQNTQK
Trigger: CTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTATCAGCTCTCACAGTGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 72 bp AGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATaGACTCTCCTGAGCCCGCCCCCAGAACTGCCGCAA +
Preference number: 3 (lower is better)
Translates to: RRRFYVPVTADL*TLLSPPPELPQ
Trigger: TTGCGGCAGTTCTGGGGGCGGGCTCAGGAGAGTCCATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CAA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCAGAACTCGGACCACTTaGGACTGGTTTGTCCAATCT +
Preference number: 3 (lower is better)
Translates to: ADRTESLAPADSGPPCHFRTRTT*DWFVQS
Trigger: AGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCT...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 72 bp GCCACACGACAGTTAAGAAGGGAACATGGAAGACTGTaGGGTTCCGTCTTCGGGGGTTCACACTGTGTACCC +
Preference number: 3 (lower is better)
Translates to: ATRQLRREHGRL*GSVFGGSHCVP
Trigger: GGGTACACAGTGTGAACCCCCGAAGACGGAACCTCACAGTCTTCCATGTTCCCTTCTTAACTGTCGTGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 72 bp AGAACCAGCTCTGGTTTACAGACTCGATGCAGGAGCTaGAGGTGGCCAGCACATTACCAGCCTGTCAAGGAT +
Preference number: 3 (lower is better)
Translates to: RTSSGLQTRCRS*RWPAHYQPVKD
Trigger: ATCCTTGACAGGCTGGTAATGTGCTGGCCACCTCCAGCTCCTGCATCGAGTCTGTAAACCAGAGCTGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CAA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTGAAGCTGTAACAGATTaGGGCTTTCTTACTCTCTGG +
Preference number: 3 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTEAVTD*GFLTLW
Trigger: CCAGAGAGTAAGAAAGCCCAAATCTGTTACAGCTTC...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 72 bp AGCTCTGGTTTACAGACTCGATGCAGGAGCTGGAGGTaGCCAGCACATTACCAGCCTGTCAAGGATGAAAGA +
Preference number: 3 (lower is better)
Translates to: SSGLQTRCRSWR*PAHYQPVKDER
Trigger: TCTTTCATCCTTGACAGGCTGGTAATGTGCTGGCCACCTCCAGCTCCTGCATCGAGTCTGTAAACCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CAA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGTACAAGAAGGCAGCCTaGCTCAAAGTGGTTAGCACT +
Preference number: 3 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRYKKAA*LKVVST
Trigger: AGTGCTAACCACTTTGAGCAAGGCTGCCTTCTTGTA...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CAA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACGAGGATTACCATGTATaGGTGCATCTGCCCACAGTG +
Preference number: 3 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDEDYHV*VHLPTV
Trigger: CACTGTGGGCAGATGCACCAATACATGGTAATCCTC...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR GCA 72 bp CTGGGCAGACTTCCAGCTAAGTTTGTACCCTGTCCTTaGGTAAGTCTACTGGCACACACACAAAGCACAGCT +
Preference number: 3 (lower is better)
Translates to: LGRLPAKFVPCP*VSLLAHTQSTA
Trigger: AGCTGTGCTTTGTGTGTGTGCCAGTAGACTTACGCAAGGACAGGGTACAAACTTAGCTGGAAGTCTGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR GCA 72 bp GAGACGGGCCTGGTCTGTGGTCTCACTAAAGCCCAATaGCCAATTAGGTCCAGAGAAGAAAGAAGAGTGAGT +
Preference number: 3 (lower is better)
Translates to: ETGLVCGLTKAQ*PIRSREERRVS
Trigger: ACTCACTCTTCTTTCTTCTCTGGACCTAATTGGGCATTGGGCTTTAGTGAGACCACAGACCAGGCCCGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 72 bp TTAGCAACGAGCCACACGACAGTTAAGAAGGGAACATaGAAGACTGTGAGGTTCCGTCTTCGGGGGTTCACA +
Preference number: 3 (lower is better)
Translates to: LATSHTTVKKGT*KTVRFRLRGFT
Trigger: TGTGAACCCCCGAAGACGGAACCTCACAGTCTTCCATGTTCCCTTCTTAACTGTCGTGTGGCTCGTTGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 72 bp CTCTCCCCCACTTTCCACGCAGCTGTTAATCCATTCTaGGGAGGAGAGAACTTAGCCATCTGCTCACATTCT +
Preference number: 3 (lower is better)
Translates to: LSPTFHAAVNPF*GGENLAICSHS
Trigger: AGAATGTGAGCAGATGGCTAAGTTCTCTCCTCCCCAGAATGGATTAACAGCTGCGTGGAAAGTGGGGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 72 bp ACACTGACAATGAGCAGGATGCACTCTAGGTCATTGTaGACAGGCACGGAGCTCTTGAGAGCACTGCTCAAA +
Preference number: 3 (lower is better)
Translates to: TLTMSRMHSRSL*TGTELLRALLK
Trigger: TTTGAGCAGTGCTCTCAAGAGCTCCGTGCCTGTCCACAATGACCTAGAGTGCATCCTGCTCATTGTCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CAA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGAGGTGCTCTGAAAATTaGCCAAGTTCCACAGAAATC +
Preference number: 3 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRRCSEN*PSSTEI
Trigger: GATTTCTGTGGAACTTGGCAAATTTTCAGAGCACCT...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 72 bp GAGTCCACTCCTGCACTCTTGAGCAGTGACCCTCAATaGGGGGAGGGGCAGTTTCTGCAAACGTATTTAAAA +
Preference number: 3 (lower is better)
Translates to: ESTPALLSSDPQ*GEGQFLQTYLK
Trigger: TTTTAAATACGTTTGCAGAAACTGCCCCTCCCCTCATTGAGGGTCACTGCTCAAGAGTGCAGGAGTGGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 72 bp TGCACTCTAGGTCATTGTGGACAGGCACGGAGCTCTTaGGAGCACTGCTCAAAGGAAAGAGGGAATCTCTAT +
Preference number: 3 (lower is better)
Translates to: CTLGHCGQARSS*EHCSKERGNLY
Trigger: ATAGAGATTCCCTCTTTCCTTTGAGCAGTGCTCTCAAGAGCTCCGTGCCTGTCCACAATGACCTAGAGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 72 bp AAATCATCAGGGAACAGTCAGTCACCCGCTTGTGGCTaGGGGCATGCGGAGGATGAGAACTACATTAAGGAT +
Preference number: 3 (lower is better)
Translates to: KSSGNSQSPACG*GHAEDENYIKD
Trigger: ATCCTTAATGTAGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTGATGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 72 bp TGCTATCTCCAACCCAGGACAAGGATACTGAGCCTCTaGGATCATCAAACACATGCTTTGCTTCTGCGCAGC +
Preference number: 3 (lower is better)
Translates to: CYLQPRTRILSL*DHQTHALLLRS
Trigger: GCTGCGCAGAAGCAAAGCATGTGTTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGGGTTGGAGATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471996.1
3UTR-3UTR CAA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCGAGCTGATACTGGAGTaGGCAGATGCCCTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCELILE*ADALGQ
Trigger: CTGCCCCAGGGCATCTGCCAACTCCAGTATCAGCTC...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CAA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACCCACTTTGGACTGGTTaGTCCAATCTCTCTTATAAT +
Preference number: 3 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDPLWTG*SNLSYN
Trigger: ATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGG...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR GCA 72 bp TCAAACACATGCTTTGCTTCTGCGCAGCCCAACTTCTaGAAGCGCTCAAGAGTTAATTACTCCTTCACCTTC +
Preference number: 3 (lower is better)
Translates to: SNTCFASAQPNF*KRSRVNYSFTF
Trigger: GAAGGTGAAGGAGTAATTAACTCTTGAGCGCTTGCAGAAGTTGGGCTGCGCAGAAGCAAAGCATGTGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471996.1
3UTR TCA 72 bp AAGAGGATTACCATGTATTGGTGCATCTGCCCACAGTaGGTACATGCTGGGAGAAAGGTGAGTGGTATAAAC +
Preference number: 3 (lower is better)
Translates to: KRITMYWCICPQ*VHAGRKVSGIN
Trigger: GTTTATACCACTCACCTTTCTCCCAGCATGTACTCACTGTGGGCAGATGCACCAATACATGGTAATCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 72 bp GGAATTTTATCATGGGGTCTGGCTTTAATGTGTAACTaGCGTGGGTCACTGAAACTCGATTATCCCACCTCA +
Preference number: 3 (lower is better)
Translates to: GILSWGLALMCN*RGSLKLDYPTS
Trigger: TGAGGTGGGATAATCGAGTTTCAGTGACCCACGTCAGTTACACATTAAAGCCAGACCCCATGATAAAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CCA 72 bp GAGGGCATGCGGAGGATGAGAACTACATTAAGGATCTaGGGCATAGCAATAAATCATTACCATGTACACTAT +
Preference number: 3 (lower is better)
Translates to: EGMRRMRTTLRI*GIAINHYHVHY
Trigger: ATAGTGTACATGGTAATGATTTATTGCTATGCCCCAGATCCTTAATGTAGTTCTCATCCTCCGCATGCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR GCA 72 bp CTATATCTAGTCAATTCTCTGCTGCTCCCTTCTTCCTaGCCCAAGTTAAAAATATTGCCCTGTAAGTTTTCC +
Preference number: 3 (lower is better)
Translates to: LYLVNSLLLPSS*PKLKILPCKFS
Trigger: GGAAAACTTACAGGGCAATATTTTTAACTTGGGGCAGGAAGAAGGGAGCAGCAGAGAATTGACTAGATATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR GCA 72 bp AATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTaGTACATCAAGCCTGGGAGTTTACACAATGATACA +
Preference number: 3 (lower is better)
Translates to: NSIAEASRNDLF*YIKPGSLHNDT
Trigger: TGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR-3UTR CAA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCGAAGCTGTAACAGATTaGGGCTTTCTTACTCTCTGG +
Preference number: 3 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCEAVTD*GFLTLW
Trigger: CCAGAGAGTAAGAAAGCCCAAATCTGTTACAGCTTC...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR TCA 72 bp CAAGAACATTGTGAGGTTCAAATGACATTATGTGAGTaGAGGTGCTCTGAAAATTTGCCAAGTTCCACAGAA +
Preference number: 3 (lower is better)
Translates to: QEHCEVQMTLCE*RCSENLPSSTE
Trigger: TTCTGTGGAACTTGGCAAATTTTCAGAGCACCTTCACTCACATAATGTCATTTGAACCTCACAATGTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTAGGAGGCCGAGGCCATaGGGCCAGCGCGAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTRRPRP*GQRERP
Trigger: CGGCCTCTCGCGCTGGCCCCATGGCCTCGGCCTCCT...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS-3UTR CCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGGCGTCCAGCCGGTCCTaGCTGAGGGTCGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRASSRS*LRVDGG
Trigger: GCCGCCGTCGACCCTCAGCCAGGACCGGCTGGACGC...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS-3UTR TCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGCAGTGACCCTCAATaGGGGGAGGGGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: PTELASPGWKPGWGGRPISSDPQ*GEGQFL
Trigger: CAGAAACTGCCCCTCCCCTCATTGAGGGTCACTGCT...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCTGCACTCTTGAGCAGTaGCCCTCAATGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PTELASPGWKPGWGGRPICTLEQ*PSMRGG
Trigger: CCCTCCCCTCATTGAGGGTCACTGCTCAAGAGTGCA...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCATCACCCGCTTGTGGCTaGGGGCATGCGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPASPACG*GHAEDE
Trigger: CTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGA...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGTGTTGTTGGCCAGCTTaGCGACGAAGTCCCGGACCC +
Preference number: 4 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLCCWPA*RRSPGP
Trigger: GGGTCCGGGACTTCGTCGCCAAGCTGGCCAACAACA...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS-3UTR TCA 90 bp GCTTCTGCGCAGCCCAACTTCTGCAAGCGCTCAAGAGTTAATTACTCCTTCACCCCAGCCGGTCCTGGCTaGGGGTCGACGGCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ASAQPNFCKRSRVNYSFTPAGPG*GSTAAA
Trigger: TGCTGCCGCCGTCGACCCTCAGCCAGGACCGGCTGG...GGTGAAGGAGTAATTAACTCTTGAGCGCTTGCAGAAGTTGGGCTGCGCAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR TCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCGAACATGGAAGACTGTaGGGTTCCGTCTTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: PTELASPGWKPGWGGRPIEHGRL*GSVFGG
Trigger: ACCCCCGAAGACGGAACCTCACAGTCTTCCATGTTC...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCACTGGAGTTGGCAGATaGCCTGGGGCAGGCGCCATG +
Preference number: 4 (lower is better)
Translates to: ADRTESLAPADSGPPCHFTGVGR*PGAGAM
Trigger: CATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGT...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCAAGACCACCTTGGGCATaGAGAGGCCCAGAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPARPPWA*RGPEAS
Trigger: GCTTGCCTCTGGGCCTCTCCATGCCCAAGGTGGTCT...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCACTCGATGCAGGAGCTaGAGGTGGCCAGCACATTAC +
Preference number: 4 (lower is better)
Translates to: PTELASPGWKPGWGGRPITRCRS*RWPAHY
Trigger: GTAATGTGCTGGCCACCTCCAGCTCCTGCATCGAGT...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCGGGTATGGATGGCCCTaGGCTCCCCTCCGTATCCTG +
Preference number: 4 (lower is better)
Translates to: ADRTESLAPADSGPPCHFGYGWP*APLRIL
Trigger: CAGGATACGGAGGGGAGCCCAGGGCCATCCATACCC...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCATCAGTCACCCGCTTGTaGCTGAGGGCATGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPASVTRL*LRACGG
Trigger: TCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGA...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp TCGGGGGTTCACACTGTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCAGCCGGTCCTGGCTaGGGGTCGACGGCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SGVHTVYPTINSREEIIQPAGPG*GSTAAA
Trigger: TGCTGCCGCCGTCGACCCTCAGCCAGGACCGGCTGG...CTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACACAGTGTGAACCCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS-3UTR TCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCGCTCAATGGCCACAATaGTGCCTCCAGAATCCAGGA +
Preference number: 4 (lower is better)
Translates to: PTELASPGWKPGWGGRPIAQWPQ*CLQNPG
Trigger: TCCTGGATTCTGGAGGCATCATTGTGGCCATTGAGC...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCTGAGATCATCAAACACATGCTTTGCTTCTGCGCAGCCCAACTTCTGCAAGCGGCGTCCAGCCGGTCCTaGCTGAGGGTCGACGGCGGC +
Preference number: 4 (lower is better)
Translates to: SEIIKHMLCFCAAQLLQAASSRS*LRVDGG
Trigger: GCCGCCGTCGACCCTCAGCCAGGACCGGCTGGACGC...CGCTTGCAGAAGTTGGGCTGCGCAGAAGCAAAGCATGTGTTTGATGATCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR CCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCGAACCATCACTGAGATaGCATCCCCCACGCTACCAT +
Preference number: 4 (lower is better)
Translates to: PTELASPGWKPGWGGRPIEPSLR*HPPRYH
Trigger: ATGGTAGCGTGGGGGATGCCATCTCAGTGATGGTTC...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGGTACCAAATTCACTTTaGGCAGGAGGGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLVPNSL*AGGRVG
Trigger: CCCCACCCTCCCTCCTGCCCAAAGTGAATTTGGTAC...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCAATCTGGAACCATCACTaGGATGGCATCCCCCACGCT +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPAIWNHH*DGIPHA
Trigger: AGCGTGGGGGATGCCATCTCAGTGATGGTTCCAGAT...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCGTACACTGTGAGAGCTaGTACTGGAGTTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: PTELASPGWKPGWGGRPIVHCES*YWSWQM
Trigger: CATCTGCCAACTCCAGTATCAGCTCTCACAGTGTAC...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCTGCACTCTTGAGCAGTaGCCCTCAATGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ADRTESLAPADSGPPCHFCTLEQ*PSMRGG
Trigger: CCCTCCCCTCATTGAGGGTCACTGCTCAAGAGTGCA...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAAAGTCTGGCACCTGCTaGCTCCGGCCCTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPKSGTC*LRPSLS
Trigger: TGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTT...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGAAGTCTGGCACCTGCTaGCTCCGGCCCTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRKSGTC*LRPSLS
Trigger: TGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTT...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCGCTCCTAGAGCTACCTaGGCTGGACAAACCCATGGC +
Preference number: 4 (lower is better)
Translates to: ADRTESLAPADSGPPCHFAPRAT*AGQTHG
Trigger: GCCATGGGTTTGTCCAGCTCAGGTAGCTCTAGGAGC...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAAGGCACATGGGGACCCTaGGCATTTCTGTGCACGAGG +
Preference number: 4 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQGTWGP*AFLCTR
Trigger: CCTCGTGCACAGAAATGCTCAGGGTCCCCATGTGCC...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCCACAATGAGCACTCCTaGTACGACTGTGACCAGCAT +
Preference number: 4 (lower is better)
Translates to: PTELASPGWKPGWGGRPIHNEHS*YDCDQH
Trigger: ATGCTGGTCACAGTCGTAGCAGGAGTGCTCATTGTG...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGTTGGCCTCTGCATGCTaGTGCAGCACAGAGTATCGA +
Preference number: 4 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLLASAC*CSTEYR
Trigger: TCGATACTCTGTGCTGCAGCAGCATGCAGAGGCCAA...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGGCCCGCCCCCAGAACTaGCGCAACTCTCCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRARPQN*RNSPKA
Trigger: AGCCTTTGGAGAGTTGCGGCAGTTCTGGGGGCGGGC...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCACAGGAGAGACGGGCCTaGTCTGTGGTCTCACTAAAG +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPAQERRA*SVVSLK
Trigger: CTTTAGTGAGACCACAGACCAGGCCCGTCTCTCCTG...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAAAGACCACCTTGGGCATaGAGAGGCCCAGAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQRPPWA*RGPEAS
Trigger: GCTTGCCTCTGGGCCTCTCCATGCCCAAGGTGGTCT...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCAGATGAAAGACCACCTTaGGCATGGAGAGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPADERPP*AWRGPE
Trigger: CTCTGGGCCTCTCCATGCCCAAGGTGGTCTTTCATC...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCTCCAAACACAGGAGGTaGGCCAAATCATCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: PTELASPGWKPGWGGRPISKHRR*AKSSGN
Trigger: GTTCCCTGATGATTTGGCCCACCTCCTGTGTTTGGA...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCTCCATGTGTCCCCTTaGTCTGTTGAAACGTGGATC +
Preference number: 4 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLLHVSP*SVETWI
Trigger: GATCCACGTTTCAACAGATCAAGGGGACACATGGAG...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAATACGGCATTCGGCTCTaGGAGTGGGGCCATTGGAAC +
Preference number: 4 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQYGIRL*EWGHWN
Trigger: GTTCCAATGGCCCCACTCTCAGAGCCGAATGCCGTA...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTTCCCCCACGCTACCATaGGCAATGACAATGCCTACG +
Preference number: 4 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTSPTLP*AMTMPT
Trigger: CGTAGGCATTGTCATTGCTCATGGTAGCGTGGGGGA...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAAAGATGGGGTCCCTGGTaGACGTGTAGGTTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQRWGPW*TCRFAS
Trigger: GCTGGCAAACCTACACGTTCACCAGGGACCCCATCT...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTAGATGGGGTCCCTGGTaGACGTGTAGGTTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSRWGPW*TCRFAS
Trigger: GCTGGCAAACCTACACGTTCACCAGGGACCCCATCT...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCCTCCTGCTACGACTGTaGCCAGCATCAATCCCACGA +
Preference number: 4 (lower is better)
Translates to: ADRTESLAPADSGPPCHFLLLRL*PASIPR
Trigger: TCGTGGGATTGATGCTGGTCACAGTCGTAGCAGGAG...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCCCACTCCTGCACTCTTaGGCAGTGACCCTCAATGAG +
Preference number: 4 (lower is better)
Translates to: ADRTESLAPADSGPPCHFPLLHS*AVTLNE
Trigger: CTCATTGAGGGTCACTGCTCAAGAGTGCAGGAGTGG...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCCAGGCACGGAGCTCTTaGGAGCACTGCTCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: ADRTESLAPADSGPPCHFQARSS*EHCSKE
Trigger: TTCCTTTGAGCAGTGCTCTCAAGAGCTCCGTGCCTG...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTCAGGCACGGAGCTCTTaGGAGCACTGCTCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTQARSS*EHCSKE
Trigger: TTCCTTTGAGCAGTGCTCTCAAGAGCTCCGTGCCTG...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGACTGACGTGGGTCACTaGAACTCGATTATCCCACCT +
Preference number: 4 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLTDVGH*NSIIPP
Trigger: AGGTGGGATAATCGAGTTTCAGTGACCCACGTCAGT...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCACCCACAGTGAGTACATaGTGGGAGAAAGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPAPTVST*WEKGEW
Trigger: CCACTCACCTTTCTCCCAGCATGTACTCACTGTGGG...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp ACTTCTGCAAGCGCTCAAGAGTTAATTACTCCTTCACCTTCCTGGGGCCTAACACCCAGCTCACCCCGATaGGGCCAGACCAGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: TSASAQELITPSPSWGLTPSSPR*GQTSAA
Trigger: TGCCGCGCTGGTCTGGCCCCATCGGGGTGAGCTGGG...TGTTAGGCCCCAGGAAGGTGAAGGAGTAATTAACTCTTGAGCGCTTGCAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR CCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACCCCACGGAGGGGAGCTaGGCCATGCTCCATGTGTCC +
Preference number: 4 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDPTEGS*AMLHVS
Trigger: GGACACATGGAGCATGGCCCAGCTCCCCTCCGTGGG...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTCACCATCCACACCATTaGCCTCTGCATGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTHHPHH*PLHAAA
Trigger: TGCAGCAGCATGCAGAGGCCAATGGTGTGGATGGTG...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAAGTTGGCAGATGCCCTaGGGCAGGCGCCATGCAGAA +
Preference number: 4 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPSWQMP*GRRHAE
Trigger: TTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACT...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTGTACCAAATTCACTTTaGGCAGGAGGGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTVPNSL*AGGRVG
Trigger: CCCCACCCTCCCTCCTGCCCAAAGTGAATTTGGTAC...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCCCAGCCCCGTTACCCTaGGGTGGGTATGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: YPTINSREEIIQPGQTSSPAPLP*GGYGWP
Trigger: GGGCCATCCATACCCACCCCAGGGTAACGGGGCTGG...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGTGCTTTACACTTTCGTaGGAAGGCAGCTGTCCCACA +
Preference number: 4 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLCFTLS*EGSCPT
Trigger: TGTGGGACAGCTGCCTTCCCACGAAAGTGTAAAGCA...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTGCTCAATGGCCACAATaGTGCCTCCAGAATCCAGGA +
Preference number: 4 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTAQWPQ*CLQNPG
Trigger: TCCTGGATTCTGGAGGCATCATTGTGGCCATTGAGC...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTCTGAAGCTAGGCCAGTaGAATAGATGGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSLKLGQ*NRWGPW
Trigger: CCAGGGACCCCATCTATTTCACTGGCCTAGCTTCAG...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCAAGGCAGCCATTGTCATaGTTTAGCAACGAGCCACAC +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPARQPLS*FSNEPH
Trigger: GTGTGGCTCGTTGCTAAATCATGACAATGGCTGCCT...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCTCACCCGCTTGTGGCTaGGGGCATGCGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: YPTINSREEIIQPGQTSSSPACG*GHAEDE
Trigger: CTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGA...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAAGGGGAGCTGGGCCATaGTCCATGTGTCCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPRGAGP*SMCPLD
Trigger: ATCAAGGGGACACATGGAGCATGGCCCAGCTCCCCT...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATCTGGGGCAGGCGCCATaGAGAACACACAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDLGQAP*RTHRSG
Trigger: CCCACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAG...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCACTGGAGTTGGCAGATaGCCTGGGGCAGGCGCCATG +
Preference number: 4 (lower is better)
Translates to: YPTINSREEIIQPGQTSSTGVGR*PGAGAM
Trigger: CATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGT...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCGCCCGCCCCCAGAACTaGCGCAACTCTCCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSARPQN*RNSPKA
Trigger: AGCCTTTGGAGAGTTGCGGCAGTTCTGGGGGCGGGC...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGTGCCAGCCATATaGTATAGTCCTTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PTELASPGWKPGWGGRPISVPAI*YSPSLH
Trigger: GTGAAGAGAAGGACTATACCATATGGCTGGCACACT...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCCCACTTTTATTAGTGTaGGAGGCTGTGTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: PTELASPGWKPGWGGRPIPLLLV*EAVSKA
Trigger: TGCTTTGGACACAGCCTCCCACACTAATAAAAGTGG...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTCAGCAGAAACAGAGCTaGGTCCCTCGCAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTQQKQS*VPRNGK
Trigger: TTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGCTG...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGAGAGATCATTCAGCCTaGGCAGACTTCCAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLRDHSA*ADFQLS
Trigger: ACTTAGCTGGAAGTCTGCCCAGGCTGAATGATCTCT...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGTGCAGGAGCTGGAGGTaGCCAGCACATTACCAGCCT +
Preference number: 4 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRCRSWR*PAHYQP
Trigger: AGGCTGGTAATGTGCTGGCCACCTCCAGCTCCTGCA...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCGGGTATGGATGGCCCTaGGCTCCCCTCCGTATCCTG +
Preference number: 4 (lower is better)
Translates to: YPTINSREEIIQPGQTSSGYGWP*APLRIL
Trigger: CAGGATACGGAGGGGAGCCCAGGGCCATCCATACCC...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGAGCTGGACAAACCCATaGCAGACAGAACAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLSWTNP*QTEQKV
Trigger: GACTTTCTGTTCTGTCTGCCATGGGTTTGTCCAGCT...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTCGCTACCATGAGCAATaGCAATGCCTACGGCATTCG +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSRYHEQ*QCLRHS
Trigger: CGAATGCCGTAGGCATTGTCATTGCTCATGGTAGCG...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTGTACACTGTGAGAGCTaGTACTGGAGTTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTVHCES*YWSWQM
Trigger: CATCTGCCAACTCCAGTATCAGCTCTCACAGTGTAC...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCATCTATGGACTCTCCTaGGCCCGCCCCCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: YPTINSREEIIQPGQTSSIYGLS*ARPQNC
Trigger: GCAGTTCTGGGGGCGGGCTCAGGAGAGTCCATAGAT...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATGCTCCTAGAGCTACCTaGGCTGGACAAACCCATGGC +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDAPRAT*AGQTHG
Trigger: GCCATGGGTTTGTCCAGCTCAGGTAGCTCTAGGAGC...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCCACAATGAGCACTCCTaGTACGACTGTGACCAGCAT +
Preference number: 4 (lower is better)
Translates to: ADRTESLAPADSGPPCHFHNEHS*YDCDQH
Trigger: ATGCTGGTCACAGTCGTAGCAGGAGTGCTCATTGTG...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp AGCCCAACTTCTGCAAGCGCTCAAGAGTTAATTACTCCTTCACCTTCCTGGGGCTGTTGTTGGCCAGCTTaGCGACGAAGTCCCGGACCC +
Preference number: 4 (lower is better)
Translates to: SPTSASAQELITPSPSWGCCWPA*RRSPGP
Trigger: GGGTCCGGGACTTCGTCGCCAAGCTGGCCAACAACA...GCCCCAGGAAGGTGAAGGAGTAATTAACTCTTGAGCGCTTGCAGAAGTTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR CCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTTCATCAAACACATGCTaGTGCGTGTTGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTSSNTC*CVLLAS
Trigger: GCTGGCCAACAACACGCACCAGCATGTGTTTGATGA...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS-3UTR CCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTGAACCATCACTGAGATaGCATCCCCCACGCTACCAT +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSEPSLR*HPPRYH
Trigger: ATGGTAGCGTGGGGGATGCCATCTCAGTGATGGTTC...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCAGCTGTTCCACACACTTaGAGTCATTTTCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPAAVPHT*SHFLDG
Trigger: ACCGTCCAGAAAATGACTCCAAGTGTGTGGAACAGC...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAACAAAACTCCAGGTCGTaGCCCTTCAGTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQQNSRS*PFSSGC
Trigger: ACAGCCAGAACTGAAGGGCCACGACCTGGAGTTTTG...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTGGATTTACCCCACCCTaGCATTTGTCCCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTGFTPP*HLSPGI
Trigger: AATTCCAGGGGACAAATGCCAGGGTGGGGTAAATCC...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCCACTTTTATTAGTGTaGGAGGCTGTGTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLPLLLV*EAVSKA
Trigger: TGCTTTGGACACAGCCTCCCACACTAATAAAAGTGG...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTGGTGTGCAGTGTTCTTaGAGTAGGACTGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSGVQCS*SRTVPR
Trigger: TCTGGGGACAGTCCTACTCCAAGAACACTGCACACC...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGACAGTGAGTACATGCTaGGAGAAAGGTGAGTGGTAT +
Preference number: 4 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLTVSTC*EKGEWY
Trigger: ATACCACTCACCTTTCTCCCAGCATGTACTCACTGT...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCGTAACCCCCATCATCTaGGATGTACACATCTGGAAC +
Preference number: 4 (lower is better)
Translates to: ADRTESLAPADSGPPCHFVTPII*DVHIWN
Trigger: GTTCCAGATGTGTACATCTCAGATGATGGGGGTTAC...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGTGGGTCCAGCTCCTCTaGAGAGCTATTCCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRWVQLL*RAIPRG
Trigger: ACCTCTTGGAATAGCTCTTCAGAGGAGCTGGACCCA...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCGTACCAAGTACACTGTaGGAGCTGATACTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: ADRTESLAPADSGPPCHFVPSTL*ELILEL
Trigger: CAACTCCAGTATCAGCTCTCACAGTGTACTTGGTAC...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTGATTTCCAAGAGTTCTaGAGACAGCCAGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSDFQEF*RQPAST
Trigger: AGTGCTGGCTGGCTGTCTTCAGAACTCTTGGAAATC...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTTCAAACACATGCTGGTaGGTGTTGTTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSSNTCW*VLLASL
Trigger: CAAGCTGGCCAACAACACGCACCAGCATGTGTTTGA...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS-3UTR GCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAAATAGGACGGCTGCTGTaGTCAATGGCCACAATGATG +
Preference number: 4 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQIGRLL*SMATMM
Trigger: CATCATTGTGGCCATTGAGCACAGCAGCCGTCCTAT...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTGACACACGGATGACTTaGGTAGCCGCAGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSDTRMT*VAAETV
Trigger: AACAGTTTCTGCGGCTACGCAAGTCATCCGTGTGTC...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGTTGGCCTCTGCATGCTaGTGCAGCACAGAGTATCGA +
Preference number: 4 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRLASAC*CSTEYR
Trigger: TCGATACTCTGTGCTGCAGCAGCATGCAGAGGCCAA...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGGGTGCTCTGAAAATTTaGCAAGTTCCACAGAAATCC +
Preference number: 4 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLGALKI*QVPQKS
Trigger: GGATTTCTGTGGAACTTGGCAAATTTTCAGAGCACC...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTACAAGAAGGCAGCCTTaGTCAAAGTGGTTAGCACTC +
Preference number: 4 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTTRRQP*SKWLAL
Trigger: GAGTGCTAACCACTTTGAGCAAGGCTGCCTTCTTGT...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCATTACCAGTGGTACATaGAAGGTAGTCAAGACTAGA +
Preference number: 4 (lower is better)
Translates to: PTELASPGWKPGWGGRPIITSGT*KVVKTR
Trigger: TCTAGTCTTGACTACCTTCCATGTACCACTGGTAAT...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCAGTCGGTCCAAAGACTTaGAATAGACAATGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPAVGPKT*NRQCLD
Trigger: ATCGAGGCATTGTCTATTCCAAGTCTTTGGACCGAC...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAAAGATGGAGGGCTGCTTaGTCACAACATAGTCTCGAC +
Preference number: 4 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQRWRAA*SQHSLD
Trigger: GTCGAGACTATGTTGTGACCAAGCAGCCCTCCATCT...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCATTTTACTTCTCGAACTaGATTTACCCCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPAFYFSN*IYPTLA
Trigger: TGCCAGGGTGGGGTAAATCCAGTTCGAGAAGTAAAA...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATCACCATCCACACCATTaGCCTCTGCATGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDHHPHH*PLHAAA
Trigger: TGCAGCAGCATGCAGAGGCCAATGGTGTGGATGGTG...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTGAACTCGGACCACTTTaGACTGGTTTGTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTELGPL*TGLSNL
Trigger: GAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTC...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGCACTCTAGGTCATTGTaGACAGGCACGGAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRHSRSL*TGTELL
Trigger: CAAGAGCTCCGTGCCTGTCCACAATGACCTAGAGTG...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATACAGAACAGAAAGTCTaGCACCTGCTGACTCCGGCC +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDTEQKV*HLLTPA
Trigger: GGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGT...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTTCCAAACACAGGAGGTaGGCCAAATCATCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSSKHRR*AKSSGN
Trigger: GTTCCCTGATGATTTGGCCCACCTCCTGTGTTTGGA...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAATGCTTTACACTTTCGTaGGAAGGCAGCTGTCCCACA +
Preference number: 4 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQCFTLS*EGSCPT
Trigger: TGTGGGACAGCTGCCTTCCCACGAAAGTGTAAAGCA...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCCTCCTGCTACGACTGTaGCCAGCATCAATCCCACGA +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSLLLRL*PASIPR
Trigger: TCGTGGGATTGATGCTGGTCACAGTCGTAGCAGGAG...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGACACAAAGCACAGCTTaGAAAATCTCAGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLTQSTA*KISEEA
Trigger: TGCTTCTTCTGAGATTTTTCAAGCTGTGCTTTGTGT...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCTCCTACGTCTTAAAATaGGTAAGAGGATTACCATGT +
Preference number: 4 (lower is better)
Translates to: PTELASPGWKPGWGGRPISYVLK*VRGLPC
Trigger: ACATGGTAATCCTCTTACTCATTTTAAGACGTAGGA...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATCGTTCCAGTTACGGCTaGTCTATGGACTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDRSSYG*SMDSPE
Trigger: CTCAGGAGAGTCCATAGATCAGCCGTAACTGGAACG...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATCCCCAAGGTCAGCTTTaGAGGAGCCATTTGCATAGG +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDPQGQL*RSHLHR
Trigger: CCTATGCAAATGGCTCCTGCAAAGCTGACCTTGGGG...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS-3UTR GCA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTAGGGGAGCTGGGCCATaGTCCATGTGTCCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSRGAGP*SMCPLD
Trigger: ATCAAGGGGACACATGGAGCATGGCCCAGCTCCCCT...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAAGGGTCTGTGGAGTGTaGCAGCCATATGGTATAGTC +
Preference number: 4 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPRVCGV*QPYGIV
Trigger: GACTATACCATATGGCTGGCACACTCCACAGACCCT...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCCTTTGTAGCCCAAAATaGAGCCATCTTCATAATCTT +
Preference number: 4 (lower is better)
Translates to: PTELASPGWKPGWGGRPILCSPK*SHLHNL
Trigger: AAGATTATGAAGATGGCTGCATTTTGGGCTACAAAG...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATCCCACAGTGAGTACATaGTGGGAGAAAGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDPTVST*WEKGEW
Trigger: CCACTCACCTTTCTCCCAGCATGTACTCACTGTGGG...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCACAGCCAGCCAGCACTaGTTATCACACACACGGGGA +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSTASQH*LSHTRG
Trigger: TCCCCGTGTGTGTGATAAGCAGTGCTGGCTGGCTGT...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATGCTTGGACTCAACCCTaGCAGAGCCAGCAAACAAAC +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDAWTQP*QSQQTN
Trigger: GTTTGTTTGCTGGCTCTGGCAGGGTTGAGTCCAAGC...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538502.5
CDS-3UTR CCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTTTCCCCCAAAATTCTTaGACACCCACAGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTFPQNS*TPTGHF
Trigger: AAAATGGCCTGTGGGTGTCCAAGAATTTTGGGGGAA...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCATGTCTGATCCCCATTTaGCCAAACATACTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPACLIPI*PNILLC
Trigger: ACAAAGCAGTATGTTTGGCCAAATGGGGATCAGACA...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTCTCCAGAATCCAGGATaGTGTAATAGTGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSLQNPG*CNSGVL
Trigger: AAGGACCCCACTATTACACCATCCTGGATTCTGGAG...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCACTTGGAGTCATTTTCTaGACGGTAGTAGCCAAAATC +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPALGVIF*TVVAKI
Trigger: GATTTTGGCTACTACCGTCCAGAAAATGACTCCAAG...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATGTGGCCCTTCAGTTCTaGCTGTTCCACACACTTGGA +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDVALQF*LFHTLG
Trigger: TCCAAGTGTGTGGAACAGCCAGAACTGAAGGGCCAC...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATCAAAACTCCAGGTCGTaGCCCTTCAGTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDQNSRS*PFSSGC
Trigger: ACAGCCAGAACTGAAGGGCCACGACCTGGAGTTTTG...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATGGTGTGCAGTGTTCTTaGAGTAGGACTGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDGVQCS*SRTVPR
Trigger: TCTGGGGACAGTCCTACTCCAAGAACACTGCACACC...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGTTCTGTTCACCAAGGTaGCAAAAAGGTGCTAAATAC +
Preference number: 4 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLFCSPR*QKGAKY
Trigger: GTATTTAGCACCTTTTTGCCACCTTGGTGAACAGAA...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAGAGAATGAGCCAGGCTaGCTGTCAGTCTTCAAACCA +
Preference number: 4 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPENEPG*LSVFKP
Trigger: TGGTTTGAAGACTGACAGCCAGCCTGGCTCATTCTC...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAAGGCTTTCTTACTCTCTaGCTGAGGGCACACATTTGT +
Preference number: 4 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQGFLTL*LRAHIC
Trigger: ACAAATGTGTGCCCTCAGCCAGAGAGTAAGAAAGCC...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCCAGGAGAGACGGGCCTaGTCTGTGGTCTCACTAAAG +
Preference number: 4 (lower is better)
Translates to: YPTINSREEIIQPGQTSSQERRA*SVVSLK
Trigger: CTTTAGTGAGACCACAGACCAGGCCCGTCTCTCCTG...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCGATGAAAGACCACCTTaGGCATGGAGAGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: YPTINSREEIIQPGQTSSDERPP*AWRGPE
Trigger: CTCTGGGCCTCTCCATGCCCAAGGTGGTCTTTCATC...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGTCAGTCACCCGCTTGTaGCTGAGGGCATGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLESVTRL*LRACGG
Trigger: TCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGA...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTAGGATACTGAGCCTCTaGGATCATCAAACACATGCT +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSRILSL*DHQTHA
Trigger: AGCATGTGTTTGATGATCTCAGAGGCTCAGTATCCT...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCATATACATCATCTGAGTaGGAGGATGAAAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPAYTSSE*EDEKGD
Trigger: ATCTCCCTTTTCATCCTCTCACTCAGATGATGTATA...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTCATATTTCTTCACAATaGGCACTCCTGCTACGACTG +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSHISSQ*ALLLRL
Trigger: CAGTCGTAGCAGGAGTGCTCATTGTGAAGAAATATG...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTCAAGAGGTCCTCATCTaGGTCATCATGATAACCACT +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSQEVLI*VIMITT
Trigger: AGTGGTTATCATGATGACTCAGATGAGGACCTCTTG...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCTGCATCTGCCCACAGTaGGTACATGCTGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSCICPQ*VHAGRK
Trigger: CTTTCTCCCAGCATGTACTCACTGTGGGCAGATGCA...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTGCTTTAATGTGTAACTaGCGTGGGTCACTGAAACTC +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSALMCN*RGSLKL
Trigger: GAGTTTCAGTGACCCACGTCAGTTACACATTAAAGC...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACAGCACAGAGTATCGATaGACCAGGAACCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDSTEYR*TRNLPP
Trigger: TGGGGGAAGGTTCCTGGTGCATCGATACTCTGTGCT...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTGCCTCTGCATGCTGCTaGAGCACAGAGTATCGATGC +
Preference number: 4 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSASACC*STEYRC
Trigger: GCATCGATACTCTGTGCTGCAGCAGCATGCAGAGGC...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TTTAAGAACTCGGACCACTTTGGACTGGTTTGTCCAATCTCTCTTATAATGCTACCCAGCTCACCCCGATaGGGCCAGACCAGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: FKNSDHFGLVCPISLIMLPSSPR*GQTSAA
Trigger: TGCCGCGCTGGTCTGGCCCCATCGGGGTGAGCTGGG...TAGCATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS-3UTR CCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGGCTGGTGCGTGTTGTTaGCCAGCTTGGCGACGAAGT +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLEAGACC*PAWRRS
Trigger: ACTTCGTCGCCAAGCTGGCCAACAACACGCACCAGC...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS-3UTR CCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCCTTGGAGTCATTTTCTaGACGGTAGTAGCCAAAATC +
Preference number: 4 (lower is better)
Translates to: ADRTESLAPADSGPPCHFLGVIF*TVVAKI
Trigger: GATTTTGGCTACTACCGTCCAGAAAATGACTCCAAG...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTTTTTACTTCTCGAACTaGATTTACCCCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSFYFSN*IYPTLA
Trigger: TGCCAGGGTGGGGTAAATCCAGTTCGAGAAGTAAAA...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACCAGCAGAAACAGAGCTaGGTCCCTCGCAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDQQKQS*VPRNGK
Trigger: TTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGCTG...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACAGCAGAGCCCAGGGATaGTACCAAGTACACTGTGAG +
Preference number: 4 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDSRAQG*YQVHCE
Trigger: CTCACAGTGTACTTGGTACCATCCCTGGGCTCTGCT...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTCTTTCCATTACTATATaGCCACCCCAAAATCCACCC +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSLSITI*PPQNPP
Trigger: GGGTGGATTTTGGGGTGGCCATATAGTAATGGAAAG...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAACTTTCCATTACTATATaGCCACCCCAAAATCCACCC +
Preference number: 4 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQLSITI*PPQNPP
Trigger: GGGTGGATTTTGGGGTGGCCATATAGTAATGGAAAG...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAGCTGTTAATCCATTCTaGGGAGGAGAGAACTTAGCC +
Preference number: 4 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPAVNPF*GGENLA
Trigger: GGCTAAGTTCTCTCCTCCCCAGAATGGATTAACAGC...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGTGGGAGAAAGGTGAGTaGTATAAACAGTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLWEKGE*YKQFFS
Trigger: AGAAAAGAACTGTTTATACCACTCACCTTTCTCCCA...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCGGGGGTTCACACTGTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGAGGGAGACCCATCAGTaGAGAGTCCACTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: SGVHTVYPTINSREEIIQRETHQ*RVHSCT
Trigger: AGTGCAGGAGTGGACTCTCCACTGATGGGTCTCCCT...CTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACACAGTGTGAACCCCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAGGCTTTCTTACTCTCTaGCTGAGGGCACACATTTGT +
Preference number: 4 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPGFLTL*LRAHIC
Trigger: ACAAATGTGTGCCCTCAGCCAGAGAGTAAGAAAGCC...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTCGGACCACTTTGGACTaGTTTGTCCAATCTCTCTTA +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSRTTLD*FVQSLL
Trigger: TAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCG...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTACTCGATGCAGGAGCTaGAGGTGGCCAGCACATTAC +
Preference number: 4 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSTRCRS*RWPAHY
Trigger: GTAATGTGCTGGCCACCTCCAGCTCCTGCATCGAGT...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCAAGAGTTAATTACTCCTTCACCTTCCTGGGGCCTAACAGCGTTACTGGGTCCACTGGTGCGTGTTGTTaGCCAGCTTGGCGACGAAGT +
Preference number: 4 (lower is better)
Translates to: SRVNYSFTFLGPNSVTGSTGACC*PAWRRS
Trigger: ACTTCGTCGCCAAGCTGGCCAACAACACGCACCAGT...GGACCCAGTAACGCTGTTAGGCCCCAGGAAGGTGAAGGAGTAATTAACTCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR TCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGAGGATACTGAGCCTCTaGGATCATCAAACACATGCT +
Preference number: 4 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRRILSL*DHQTHA
Trigger: AGCATGTGTTTGATGATCTCAGAGGCTCAGTATCCT...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATCCAGGACAAGGATACTaGGCCTCTGAGATCATCAAA +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDPGQGY*ASEIIK
Trigger: TTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGG...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATGTCCCCTTGATCTGTTaGAACGTGGATCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDVPLIC*NVDPSC
Trigger: ACAAGAAGGATCCACGTTTCAACAGATCAAGGGGAC...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCCTCCATGTGTCCCCTTaGTCTGTTGAAACGTGGATC +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSLHVSP*SVETWI
Trigger: GATCCACGTTTCAACAGATCAAGGGGACACATGGAG...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGATCTGGAACCATCACTaGGATGGCATCCCCCACGCT +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLEIWNHH*DGIPHA
Trigger: AGCGTGGGGGATGCCATCTCAGTGATGGTTCCAGAT...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGCATATTTCTTCACAATaGGCACTCCTGCTACGACTG +
Preference number: 4 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRHISSQ*ALLLRL
Trigger: CAGTCGTAGCAGGAGTGCTCATTGTGAAGAAATATG...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCACTGACGTGGGTCACTaGAACTCGATTATCCCACCT +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSTDVGH*NSIIPP
Trigger: AGGTGGGATAATCGAGTTTCAGTGACCCACGTCAGT...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCACATGTCATCATTTGCTaGCAGAATAGAATAGAACTG +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPAHVIIC*QNRIEL
Trigger: CAGTTCTATTCTATTCTGGCAGCAAATGATGACATG...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCACTTTGTAGCCCAAAATaGAGCCATCTTCATAATCTT +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPALCSPK*SHLHNL
Trigger: AAGATTATGAAGATGGCTGCATTTTGGGCTACAAAG...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACGACACACGGATGACTTaGGTAGCCGCAGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDDTRMT*VAAETV
Trigger: AACAGTTTCTGCGGCTACGCAAGTCATCCGTGTGTC...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTCCATTGGCCTCTGCATaGTGCTGCAGCACAGAGTAT +
Preference number: 4 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSPLASA*CCSTEY
Trigger: ATACTCTGTGCTGCAGCAGCATGCAGAGGCCAATGG...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTACTGGTGTGAAGAAATaGATACTGCAAGTTGTTTCG +
Preference number: 4 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTTGVKK*ILQVVS
Trigger: CGAAACAACTTGCAGTATGCATTTCTTCACACCAGT...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCATTCCCCCAAAATTCTTaGACACCCACAGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPFPQNS*TPTGHF
Trigger: AAAATGGCCTGTGGGTGTCCAAGAATTTTGGGGGAA...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCAAAACATACTGCTTTGTaGATTTCTTCCCATTTTCCC +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPAKHTAL*ISSHFP
Trigger: GGGAAAATGGGAAGAAATCCACAAAGCAGTATGTTT...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGGTCGGTCCAAAGACTTaGAATAGACAATGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRVGPKT*NRQCLD
Trigger: ATCGAGGCATTGTCTATTCCAAGTCTTTGGACCGAC...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGATGGAGGGCTGCTTaGTCACAACATAGTCTCGAC +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSRWRAA*SQHSLD
Trigger: GTCGAGACTATGTTGTGACCAAGCAGCCCTCCATCT...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCGGATTTACCCCACCCTaGCATTTGTCCCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: YPTINSREEIIQPGQTSSGFTPP*HLSPGI
Trigger: AATTCCAGGGGACAAATGCCAGGGTGGGGTAAATCC...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTAGCAGAGCCCAGGGATaGTACCAAGTACACTGTGAG +
Preference number: 4 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSSRAQG*YQVHCE
Trigger: CTCACAGTGTACTTGGTACCATCCCTGGGCTCTGCT...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCATCTGTGTGAGGAGCTaGTGTGCAGTGTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: YPTINSREEIIQPGQTSSICVRS*CAVFLE
Trigger: CTCCAAGAACACTGCACACCAGCTCCTCACACAGAT...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAACAGTGAGTACATGCTaGGAGAAAGGTGAGTGGTAT +
Preference number: 4 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPTVSTC*EKGEWY
Trigger: ATACCACTCACCTTTCTCCCAGCATGTACTCACTGT...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCAGAGCCCTATCGTATATaGTTAGAGAAGAATATTGAG +
Preference number: 4 (lower is better)
Translates to: GWKPGWGGRPISGESTPAEPYRI*LEKNIE
Trigger: CTCAATATTCTTCTCTAACCATATACGATAGGGCTC...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATCAGCCTTGCTCAAAGTaGTTAGCACTCGCATGTGTA +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDQPCSK*LALACV
Trigger: TACACATGCGAGTGCTAACCACTTTGAGCAAGGCTG...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGAGGGAGACCCATCAGTaGAGAGTCCACTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLERETHQ*RVHSCT
Trigger: AGTGCAGGAGTGGACTCTCCACTGATGGGTCTCCCT...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATCATGAGAACCAGCTCTaGTTTACAGACTCGATGCAG +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDHENQL*FTDSMQ
Trigger: CTGCATCGAGTCTGTAAACCAGAGCTGGTTCTCATG...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGCTCCCCTCCGTATCCTaGTATCGTGACGAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLELPSVS*YRDEGH
Trigger: ATGGCCTTCGTCACGATACCAGGATACGGAGGGGAG...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCTGAGATCATCAAACACATGCTTTGCTTCTGCGCAGCCCAACTTCTGCAAGCGACTCCTTCACCTTCCTaGGGCCTAACAGCGTTACTG +
Preference number: 4 (lower is better)
Translates to: SEIIKHMLCFCAAQLLQATPSPS*GLTALL
Trigger: CAGTAACGCTGTTAGGCCCCAGGAAGGTGAAGGAGT...CGCTTGCAGAAGTTGGGCTGCGCAGAAGCAAAGCATGTGTTTGATGATCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR TCA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCCCAGGACAAGGATACTaGGCCTCTGAGATCATCAAA +
Preference number: 4 (lower is better)
Translates to: YPTINSREEIIQPGQTSSPGQGY*ASEIIK
Trigger: TTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGG...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp AGCCCAACTTCTGCAAGCGCTCAAGAGTTAATTACTCCTTCACCTTCCTGGGGCCCAGGACAAGGATACTaGGCCTCTGAGATCATCAAA +
Preference number: 4 (lower is better)
Translates to: SPTSASAQELITPSPSWGPGQGY*ASEIIK
Trigger: TTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGG...GCCCCAGGAAGGTGAAGGAGTAATTAACTCTTGAGCGCTTGCAGAAGTTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR TCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTTATACATCATCTGAGTaGGAGGATGAAAAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSYTSSE*EDEKGD
Trigger: ATCTCCCTTTTCATCCTCTCACTCAGATGATGTATA...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCGTTCATCTACATGCATaGATACCATGTCATCATTTG +
Preference number: 4 (lower is better)
Translates to: ADRTESLAPADSGPPCHFVHLHA*IPCHHL
Trigger: CAAATGATGACATGGTATTCATGCATGTAGATGAAC...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGAATGCCTCGATCATCTaGGGTAAAGATTGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRNASII*GKDCAK
Trigger: TTTGGCACAATCTTTACCTCAGATGATCGAGGCATT...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACGTAACCCCCATCATCTaGGATGTACACATCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDVTPII*DVHIWN
Trigger: GTTCCAGATGTGTACATCTCAGATGATGGGGGTTAC...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCCCCTGTAAGTTTTCCTaGTGTACTGTGTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSPCKFS*CTVWEA
Trigger: TGCTTCCCACACAGTACATCAGGAAAACTTACAGGG...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGTTCAATGATGCTTCATaGGGGCAAGGCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLEFNDAS*GQGLGS
Trigger: AGAGCCCAGGCCTTGCCCTCATGAAGCATCATTGAA...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp TCGGGGGTTCACACTGTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGATAGGACGGCTGCTGTaGTCAATGGCCACAATGATG +
Preference number: 4 (lower is better)
Translates to: SGVHTVYPTINSREEIIQIGRLL*SMATMM
Trigger: CATCATTGTGGCCATTGAGCACAGCAGCCGTCCTAT...CTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACACAGTGTGAACCCCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTTGTGAGGAGCTGGTGTaGAGTGTTCTTGGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSCEELV*SVLGVG
Trigger: TCCTACTCCAAGAACACTGCACACCAGCTCCTCACA...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACTTTGTACCCTGTCCTTaGGTAAGTCTACTGGCACAC +
Preference number: 4 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDFVPCP*VSLLAH
Trigger: GTGTGCCAGTAGACTTACGCAAGGACAGGGTACAAA...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCACAAGAAGGCAGCCTTaGTCAAAGTGGTTAGCACTC +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSTRRQP*SKWLAL
Trigger: GAGTGCTAACCACTTTGAGCAAGGCTGCCTTCTTGT...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCCCCACGGAGGGGAGCTaGGCCATGCTCCATGTGTCC +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCPTEGS*AMLHVS
Trigger: GGACACATGGAGCATGGCCCAGCTCCCCTCCGTGGG...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATCTGGGTCCCTCGCAATaGGAAATTTATTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDLGPSQ*EIYFLK
Trigger: CTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAG...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACAGAGATCATTCAGCCTaGGCAGACTTCCAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDRDHSA*ADFQLS
Trigger: ACTTAGCTGGAAGTCTGCCCAGGCTGAATGATCTCT...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCCAGCCTTGCTCAAAGTaGTTAGCACTCGCATGTGTA +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSQPCSK*LALACV
Trigger: TACACATGCGAGTGCTAACCACTTTGAGCAAGGCTG...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTTTCTGTTCACCAAGGTaGCAAAAAGGTGCTAAATAC +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSFCSPR*QKGAKY
Trigger: GTATTTAGCACCTTTTTGCCACCTTGGTGAACAGAA...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTGAGAATGAGCCAGGCTaGCTGTCAGTCTTCAAACCA +
Preference number: 4 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSENEPG*LSVFKP
Trigger: TGGTTTGAAGACTGACAGCCAGCCTGGCTCATTCTC...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCTGGGGTGGGTATGGATaGCCCTGGGCTCCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCWGGYG*PWAPLR
Trigger: ACGGAGGGGAGCCCAGGGCCATCCATACCCACCCCA...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCCCAGCCCCGTTACCCTaGGGTGGGTATGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCPAPLP*GGYGWP
Trigger: GGGCCATCCATACCCACCCCAGGGTAACGGGGCTGG...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACCACTTCCAAGTATCCTaGATGAATATAGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDHFQVS*MNIGAR
Trigger: CCTCGCCCCTATATTCATCCAGGATACTTGGAAGTG...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCTGGACAAACCCATaGCAGACAGAACAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSSWTNP*QTEQKV
Trigger: GACTTTCTGTTCTGTCTGCCATGGGTTTGTCCAGCT...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
3UTR CAA 72 bp ATGCACTCTAGGTCATTGTGGACAGGCACGGAGCTCTaGAGAGCACTGCTCAAAGGAAAGAGGGAATCTCTA +
Preference number: 4 (lower is better)
Translates to: MHSRSLWTGTEL*RALLKGKRESL
Trigger: TAGAGATTCCCTCTTTCCTTTGAGCAGTGCTCTCAAGAGCTCCGTGCCTGTCCACAATGACCTAGAGTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp CTGAGATCATCAAACACATGCTTTGCTTCTGCGCAGCCCAACTTCTGCAAGCGCAGGATACTGAGCCTCTaGGATCATCAAACACATGCT +
Preference number: 4 (lower is better)
Translates to: LRSSNTCFASAQPNFCKRRILSL*DHQTHA
Trigger: AGCATGTGTTTGATGATCTCAGAGGCTCAGTATCCT...GCGCTTGCAGAAGTTGGGCTGCGCAGAAGCAAAGCATGTGTTTGATGATCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR TCA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAAATCCCAAGAACATTGTaGGGTTCAAATGACATTATG +
Preference number: 4 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQIPRTL*GSNDIM
Trigger: CATAATGTCATTTGAACCTCACAATGTTCTTGGGAT...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCCTCACTAAAGCCCAATaGCCAATTAGGTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: YPTINSREEIIQPGQTSSLTKAQ*PIRSRE
Trigger: TTCTCTGGACCTAATTGGGCATTGGGCTTTAGTGAG...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp TCTGAGATCATCAAACACATGCTTTGCTTCTGCGCAGCCCAACTTCTGCAAGCGGATTTTGACAACTGGTaGGTGTTGTTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SEIIKHMLCFCAAQLLQADFDNW*VLLASL
Trigger: CAAGCTGGCCAACAACACGCACCAGTTGTCAAAATC...CGCTTGCAGAAGTTGGGCTGCGCAGAAGCAAAGCATGTGTTTGATGATCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR GCA 90 bp AAGCGCTCAAGAGTTAATTACTCCTTCACCTTCCTGGGGCCTAACAGCGTTACTGCGCAGCCCAACTTCTaGAAGCGCTCAAGAGTTAAT +
Preference number: 4 (lower is better)
Translates to: KRSRVNYSFTFLGPNSVTAQPNF*KRSRVN
Trigger: ATTAACTCTTGAGCGCTTGCAGAAGTTGGGCTGCGC...AGTAACGCTGTTAGGCCCCAGGAAGGTGAAGGAGTAATTAACTCTTGAGCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR GCA 90 bp ACTTCTGCAAGCGCTCAAGAGTTAATTACTCCTTCACCTTCCTGGGGCCTAACACACATGCTTTGCTTCTaGGCAGCCCAACTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: TSASAQELITPSPSWGLTHMLCF*AAQLLQ
Trigger: TTGCAGAAGTTGGGCTGCGCAGAAGCAAAGCATGTG...TGTTAGGCCCCAGGAAGGTGAAGGAGTAATTAACTCTTGAGCGCTTGCAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR CCA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTGCTGTTCCACACACTTaGAGTCATTTTCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSAVPHT*SHFLDG
Trigger: ACCGTCCAGAAAATGACTCCAAGTGTGTGGAACAGC...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGATCTGTGTGAGGAGCTaGTGTGCAGTGTTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLEICVRS*CAVFLE
Trigger: CTCCAAGAACACTGCACACCAGCTCCTCACACAGAT...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTTGTGGAATTTTATCATaGGGTCTGGCTTTAATGTGT +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSCGILS*GLALMC
Trigger: ACACATTAAAGCCAGACCCCATGATAAAATTCCACA...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCTCCCCCAAGACCAAATaGGTAGATTTTCACACCAAT +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSSPKTK*VDFHTN
Trigger: ATTGGTGTGAAAATCTACTCATTTGGTCTTGGGGGA...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGGTCCCCTTGATCTGTTaGAACGTGGATCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLEVPLIC*NVDPSC
Trigger: ACAAGAAGGATCCACGTTTCAACAGATCAAGGGGAC...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACAATGCCTCGATCATCTaGGGTAAAGATTGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDNASII*GKDCAK
Trigger: TTTGGCACAATCTTTACCTCAGATGATCGAGGCATT...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTCAAGAGGTCCTCATCTaGGTCATCATGATAACCACT +
Preference number: 4 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSQEVLI*VIMITT
Trigger: AGTGGTTATCATGATGACTCAGATGAGGACCTCTTG...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGAGGTCCTTTTGGCTTTaGTGGAAGCAGCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLERSFWL*WKQQKQ
Trigger: CTGTTTCTGCTGCTTCCATCAAAGCCAAAAGGACCT...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGGTACCAAGTACACTGTaGGAGCTGATACTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLEVPSTL*ELILEL
Trigger: CAACTCCAGTATCAGCTCTCACAGTGTACTTGGTAC...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGCCCTGTAAGTTTTCCTaGTGTACTGTGTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLEPCKFS*CTVWEA
Trigger: TGCTTCCCACACAGTACATCAGGAAAACTTACAGGG...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATACACAAAGCACAGCTTaGAAAATCTCAGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDTQSTA*KISEEA
Trigger: TGCTTCTTCTGAGATTTTTCAAGCTGTGCTTTGTGT...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCATCTATGGACTCTCCTaGGCCCGCCCCCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCIYGLS*ARPQNC
Trigger: GCAGTTCTGGGGGCGGGCTCAGGAGAGTCCATAGAT...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTGGCACATGGGGACCCTaGGCATTTCTGTGCACGAGG +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCGTWGP*AFLCTR
Trigger: CCTCGTGCACAGAAATGCTCAGGGTCCCCATGTGCC...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp TCGGGGGTTCACACTGTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGGCTTTAATGTGTAACTaGCGTGGGTCACTGAAACTC +
Preference number: 4 (lower is better)
Translates to: SGVHTVYPTINSREEIIQALMCN*RGSLKL
Trigger: GAGTTTCAGTGACCCACGTCAGTTACACATTAAAGC...CTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACACAGTGTGAACCCCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTAAAGGGAGATCTGTTTaGACAAAATTCTTCGCAAAA +
Preference number: 4 (lower is better)
Translates to: ILELADALGQAPCRTHRSKGRSV*TKFFAK
Trigger: TTTTGCGAAGAATTTTGTGCAAACAGATCTCCCTTT...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GAAGTCCATTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATAGGGTCTGTGGAGTGTaGCAGCCATATGGTATAGTC +
Preference number: 4 (lower is better)
Translates to: EVHSEADVDSTFQLRLIYRVCGV*QPYGIV
Trigger: GACTATACCATATGGCTGGCACACTCCACAGACCCT...ATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAATGGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTCTGGGGCAGGCGCCATaGAGAACACACAGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCLGQAP*RTHRSG
Trigger: CCCACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAG...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GAAGTCCATTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATTGTGAGGAGCTGGTGTaGAGTGTTCTTGGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: EVHSEADVDSTFQLRLIYCEELV*SVLGVG
Trigger: TCCTACTCCAAGAACACTGCACACCAGCTCCTCACA...ATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAATGGACTTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGAAATGATCTCTTCTaGTACATCAAGCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSRNDLF*YIKPGS
Trigger: ACTCCCAGGCTTGATGTAGCAGAAGAGATCATTTCT...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTCTCACTAAAGCCCAATaGCCAATTAGGTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSLTKAQ*PIRSRE
Trigger: TTCTCTGGACCTAATTGGGCATTGGGCTTTAGTGAG...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp CTATCTCCAACCCAGGACAAGGATACTGAGCCTCTGAGATCATCAAACACATGCAGATCATCAAACACATaGTTTGCTTCTGCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LSPTQDKDTEPLRSSNTCRSSNT*FASAQP
Trigger: GGGCTGCGCAGAAGCAAAGCATGTGTTTGATGATCT...GCATGTGTTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGGGTTGGAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR CCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGAGTCATAATTACCAGTaGTACATGGAAGGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRSHNYQ*YMEGSQ
Trigger: TTGACTACCTTCCATGTACCACTGGTAATTATGACT...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAAGTCATAATTACCAGTaGTACATGGAAGGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPSHNYQ*YMEGSQ
Trigger: TTGACTACCTTCCATGTACCACTGGTAATTATGACT...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGAAACATACTGCTTTGTaGATTTCTTCCCATTTTCCC +
Preference number: 4 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRKHTAL*ISSHFP
Trigger: GGGAAAATGGGAAGAAATCCACAAAGCAGTATGTTT...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TTTAAGAACTCGGACCACTTTGGACTGGTTTGTCCAATCTCTCTTATAATGCTAAGTTGGCAGATGCCCTaGGGCAGGCGCCATGCAGAA +
Preference number: 4 (lower is better)
Translates to: FKNSDHFGLVCPISLIMLSWQMP*GRRHAE
Trigger: TTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACT...TAGCATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAAAGCATCATCTAGACTaGAAGTGTGTTTTCAATTGG +
Preference number: 4 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPKHHLD*KCVFNW
Trigger: CCAATTGAAAACACACTTCCAGTCTAGATGATGCTT...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGGCTGTTAATCCATTCTaGGGAGGAGAGAACTTAGCC +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLEAVNPF*GGENLA
Trigger: GGCTAAGTTCTCTCCTCCCCAGAATGGATTAACAGC...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp CTATCTCCAACCCAGGACAAGGATACTGAGCCTCTGAGATCATCAAACACATGCAGAGATTTTGACAACTaGTGCGTGTTGTTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LSPTQDKDTEPLRSSNTCRDFDN*CVLLAS
Trigger: GCTGGCCAACAACACGCACCAGTTGTCAAAATCTCT...GCATGTGTTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGGGTTGGAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR TCA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTTCCCCCAAGACCAAATaGGTAGATTTTCACACCAAT +
Preference number: 4 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSSPKTK*VDFHTN
Trigger: ATTGGTGTGAAAATCTACTCATTTGGTCTTGGGGGA...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCTACGGCATTCGGCTCTaGGAGTGGGGCCATTGGAAC +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCYGIRL*EWGHWN
Trigger: GTTCCAATGGCCCCACTCTCAGAGCCGAATGCCGTA...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTAGCAGTGACCCTCAATaGGGGGAGGGGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCSSDPQ*GEGQFL
Trigger: CAGAAACTGCCCCTCCCCTCATTGAGGGTCACTGCT...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATTTTGCAGGAGCCATTTaGATAGGTTGTAAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDFAGAI*IGCKED
Trigger: ATCTTCTTTACAACCTATGCAAATGGCTCCTGCAAA...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS-3UTR GCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTTCAGGCTTCCTCAGGTaGGTCCACCTTCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCSGFLR*VHLPPW
Trigger: CCAAGGAGGAAGGTGGACGCACCTGAGGAAGCCTGA...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGTGCAGGAGCCATTTaGATAGGTTGTAAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSSAGAI*IGCKED
Trigger: ATCTTCTTTACAACCTATGCAAATGGCTCCTGCACT...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538502.5
CDS-3UTR CCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGAGTGTGCCAGCCATATaGTATAGTCCTTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLESVPAI*YSPSLH
Trigger: GTGAAGAGAAGGACTATACCATATGGCTGGCACACT...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GAAGTCCATTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATCATGAGAACCAGCTCTaGTTTACAGACTCGATGCAG +
Preference number: 4 (lower is better)
Translates to: EVHSEADVDSTFQLRLIYHENQL*FTDSMQ
Trigger: CTGCATCGAGTCTGTAAACCAGAGCTGGTTCTCATG...ATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAATGGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTTCCCCCACGCTACCATaGGCAATGACAATGCCTACG +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCSPTLP*AMTMPT
Trigger: CGTAGGCATTGTCATTGCTCATGGTAGCGTGGGGGA...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCCTGAAGCTAGGCCAGTaGAATAGATGGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCLKLGQ*NRWGPW
Trigger: CCAGGGACCCCATCTATTTCACTGGCCTAGCTTCAG...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCATTGTGAGGTTCAAATaGCATTATGTGAGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSIVRFK*HYVSEG
Trigger: ACCTTCACTCACATAATGTCATTTGAACCTCACAAT...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACATTGTGAGGTTCAAATaGCATTATGTGAGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDIVRFK*HYVSEG
Trigger: ACCTTCACTCACATAATGTCATTTGAACCTCACAAT...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp TCTGCGCAGCCCAACTTCTGCAAGCGCTCAAGAGTTAATTACTCCTTCACCTTCAGCGTTACTGGGTCCTaGTTATTTATACAGACGAAA +
Preference number: 4 (lower is better)
Translates to: SAQPNFCKRSRVNYSFTFSVTGS*LFIQTK
Trigger: TTTCGTCTGTATAAATAATCAGGACCCAGTAACGCT...GAAGGTGAAGGAGTAATTAACTCTTGAGCGCTTGCAGAAGTTGGGCTGCGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR TCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCCATTCTTCCCAGAGCTaGCACCCCATACAACACGGC +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCHSSQS*HPIQHG
Trigger: GCCGTGTTGTATGGGGTGTCAGCTCTGGGAAGAATG...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538502.5
CDS-3UTR GCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCGCCTCTGCATGCTGCTaGAGCACAGAGTATCGATGC +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCASACC*STEYRC
Trigger: GCATCGATACTCTGTGCTGCAGCAGCATGCAGAGGC...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTGAGCCCCAAGGTCAGTaGAGGAGCCATTTGCATAGG +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCEPQGQ*RSHLHR
Trigger: CCTATGCAAATGGCTCCTGCACTGACCTTGGGGCTC...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538502.5
CDS-3UTR CCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAAAGTGATCATGGTCTaGATAGAATTATCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSKVIMV*IELSSE
Trigger: CTCCGAAGATAATTCTATCCAGACCATGATCACTTT...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACTGGGAGAAAGGTGAGTaGTATAAACAGTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDWEKGE*YKQFFS
Trigger: AGAAAAGAACTGTTTATACCACTCACCTTTCTCCCA...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCACAGAACAGAAAGTCTaGCACCTGCTGACTCCGGCC +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCTEQKV*HLLTPA
Trigger: GGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGT...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCTGTGGAATTTTATCATaGGGTCTGGCTTTAATGTGT +
Preference number: 4 (lower is better)
Translates to: VYPTINSREEIIQPGQTSCGILS*GLALMC
Trigger: ACACATTAAAGCCAGACCCCATGATAAAATTCCACA...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCTCAGTCCTGTCAGCTTaGACTCAACCCTGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCSVLSA*TQPCQS
Trigger: GCTCTGGCAGGGTTGAGTCCAAGCTGACAGGACTGA...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538502.5
CDS-3UTR TCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCCGCTACCATGAGCAATaGCAATGCCTACGGCATTCG +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCRYHEQ*QCLRHS
Trigger: CGAATGCCGTAGGCATTGTCATTGCTCATGGTAGCG...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTTGGGTCCAGCTCCTCTaGAGAGCTATTCCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCWVQLL*RAIPRG
Trigger: ACCTCTTGGAATAGCTCTTCAGAGGAGCTGGACCCA...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCCGTTCCAGTTACGGCTaGTCTATGGACTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCRSSYG*SMDSPE
Trigger: CTCAGGAGAGTCCATAGATCAGCCGTAACTGGAACG...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTTTCAATGATGCTTCATaGGGGCAAGGCCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCFNDAS*GQGLGS
Trigger: AGAGCCCAGGCCTTGCCCTCATGAAGCATCATTGAA...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp TTTAAGAACTCGGACCACTTTGGACTGGTTTGTCCAATCTCTCTTATAATGCTAAGCACAGAGTATCGATaGACCAGGAACCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: FKNSDHFGLVCPISLIMLSTEYR*TRNLPP
Trigger: TGGGGGAAGGTTCCTGGTGCATCGATACTCTGTGCT...TAGCATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp TTTAAGAACTCGGACCACTTTGGACTGGTTTGTCCAATCTCTCTTATAATGCTACCATTGGCCTCTGCATaGTGCTGCAGCACAGAGTAT +
Preference number: 4 (lower is better)
Translates to: FKNSDHFGLVCPISLIMLPLASA*CCSTEY
Trigger: ATACTCTGTGCTGCAGCAGCATGCAGAGGCCAATGG...TAGCATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCGGGGGTTCACACTGTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGGAGCCCTATCGTATATaGTTAGAGAAGAATATTGAG +
Preference number: 4 (lower is better)
Translates to: SGVHTVYPTINSREEIIQEPYRI*LEKNIE
Trigger: CTCAATATTCTTCTCTAACCATATACGATAGGGCTC...CTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACACAGTGTGAACCCCCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTCACTCTAGGTCATTGTaGACAGGCACGGAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCHSRSL*TGTELL
Trigger: CAAGAGCTCCGTGCCTGTCCACAATGACCTAGAGTG...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGATCCCAAGAACATTGTaGGGTTCAAATGACATTATG +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLEIPRTL*GSNDIM
Trigger: CATAATGTCATTTGAACCTCACAATGTTCTTGGGAT...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTGATTTCCAAGAGTTCTaGAGACAGCCAGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCDFQEF*RQPAST
Trigger: AGTGCTGGCTGGCTGTCTTCAGAACTCTTGGAAATC...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GAAGTCCATTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATACTGGTGTGAAGAAATaGATACTGCAAGTTGTTTCG +
Preference number: 4 (lower is better)
Translates to: EVHSEADVDSTFQLRLIYTGVKK*ILQVVS
Trigger: CGAAACAACTTGCAGTATGCATTTCTTCACACCAGT...ATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAATGGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTAGGTCCTTTTGGCTTTaGTGGAAGCAGCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCRSFWL*WKQQKQ
Trigger: CTGTTTCTGCTGCTTCCATCAAAGCCAAAAGGACCT...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGAAAGGGAGATCTGTTTaGACAAAATTCTTCGCAAAA +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLEKGRSV*TKFFAK
Trigger: TTTTGCGAAGAATTTTGTGCAAACAGATCTCCCTTT...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGACCAAGAAATCAACATaGTCCTGCTATTTCAATGAT +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLETKKST*SCYFND
Trigger: ATCATTGAAATAGCAGGAGCATGTTGATTTCTTGGT...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCCTCCAGAATCCAGGATaGTGTAATAGTGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCLQNPG*CNSGVL
Trigger: AAGGACCCCACTATTACACCATCCTGGATTCTGGAG...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTGAACTCGGACCACTTTaGACTGGTTTGTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCELGPL*TGLSNL
Trigger: GAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTC...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TTTAAGAACTCGGACCACTTTGGACTGGTTTGTCCAATCTCTCTTATAATGCTACACTTCCAAGTATCCTaGATGAATATAGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: FKNSDHFGLVCPISLIMLHFQVS*MNIGAR
Trigger: CCTCGCCCCTATATTCATCCAGGATACTTGGAAGTG...TAGCATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGACTACATTAAGGATCTaGGGCATAGCAATAAATCAT +
Preference number: 4 (lower is better)
Translates to: AETELGPSQWEIYFLKLETTLRI*GIAINH
Trigger: ATGATTTATTGCTATGCCCCAGATCCTTAATGTAGT...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTGGTGTTACAAAGGTCTaGCGATTCACAACAACAGGC +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCGVTKV*RFTTTG
Trigger: GCCTGTTGTTGTGAATCGCCAGACCTTTGTAACACC...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538502.5
CDS-3UTR GCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTGGTGCTCTGAAAATTTaGCAAGTTCCACAGAAATCC +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCGALKI*QVPQKS
Trigger: GGATTTCTGTGGAACTTGGCAAATTTTCAGAGCACC...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp TTTAAGAACTCGGACCACTTTGGACTGGTTTGTCCAATCTCTCTTATAATGCTAAGAAATGATCTCTTCTaGTACATCAAGCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: FKNSDHFGLVCPISLIMLRNDLF*YIKPGS
Trigger: ACTCCCAGGCTTGATGTAGCAGAAGAGATCATTTCT...TAGCATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCAGATCATCAAACACATaGTTCAGACTTCCGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCRSSNT*FRLPGV
Trigger: AACACCCGGAAGTCTGAAGCATGTGTTTGATGATCT...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538502.5
CDS-3UTR CCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCTGTCTGATCCCCATTTaGCCAAACATACTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCCLIPI*PNILLC
Trigger: ACAAAGCAGTATGTTTGGCCAAATGGGGATCAGACA...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCATTACCAGTGGTACATaGAAGGTAGTCAAGACTAGA +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCITSGT*KVVKTR
Trigger: TCTAGTCTTGACTACCTTCCATGTACCACTGGTAAT...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR TCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCGTTCATCTACATGCATaGATACCATGTCATCATTTG +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCVHLHA*IPCHHL
Trigger: CAAATGATGACATGGTATTCATGCATGTAGATGAAC...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp TTTAAGAACTCGGACCACTTTGGACTGGTTTGTCCAATCTCTCTTATAATGCTACATGTCATCATTTGCTaGCAGAATAGAATAGAACTG +
Preference number: 4 (lower is better)
Translates to: FKNSDHFGLVCPISLIMLHVIIC*QNRIEL
Trigger: CAGTTCTATTCTATTCTGGCAGCAAATGATGACATG...TAGCATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTAAAGTGATCATGGTCTaGATAGAATTATCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCKVIMV*IELSSE
Trigger: CTCCGAAGATAATTCTATCCAGACCATGATCACTTT...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCAAGCATCATCTAGACTaGAAGTGTGTTTTCAATTGG +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCKHHLD*KCVFNW
Trigger: CCAATTGAAAACACACTTCCAGTCTAGATGATGCTT...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR GCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTACCAAGAAATCAACATaGTCCTGCTATTTCAATGAT +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCTKKST*SCYFND
Trigger: ATCATTGAAATAGCAGGAGCATGTTGATTTCTTGGT...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TTTAAGAACTCGGACCACTTTGGACTGGTTTGTCCAATCTCTCTTATAATGCTAAAAGAAAAATCACTGTaGTCTGTGGTCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: FKNSDHFGLVCPISLIMLKEKSL*SVVSEK
Trigger: TTTTTCAGAGACCACAGACCACAGTGATTTTTCTTT...TAGCATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTAAAGAAAAATCACTGTaGTCTGTGGTCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCKEKSL*SVVSEK
Trigger: TTTTTCAGAGACCACAGACCACAGTGATTTTTCTTT...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCACTACATTAAGGATCTaGGGCATAGCAATAAATCAT +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCTTLRI*GIAINH
Trigger: ATGATTTATTGCTATGCCCCAGATCCTTAATGTAGT...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CCA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCAGTTGGAGTAGAAGTTaGGAAGTTATGTTTACAGAA +
Preference number: 4 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCSWSRS*EVMFTE
Trigger: TTCTGTAAACATAACTTCCCAACTTCTACTCCAACT...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538502.5
CDS-3UTR CAA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGTGCTGGTGCGTGTTGTaGGCCAGCTTGGCGACGAAG +
Preference number: 5 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLCWCVL*ASLATK
Trigger: CTTCGTCGCCAAGCTGGCCAACAACACGCACCAGCA...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS CCA 90 bp GATGTTCAAGAGATTTTGACAACTGGTGCGTGTTGTTGGCCAGCTTaGCGACGAAGTCCCGGACCCGGCCGCACTCCTCGTCCTCGCCCG +
Preference number: 5 (lower is better)
Translates to: DVQEILTTGACCWPA*RRSPGPGRTPRPRP
Trigger: CGGGCGAGGACGAGGAGTGCGGCCGGGTCCGGGACTTCGTCGCCAAGCTGGCCAACAACACGCACCAGTTGTCAAAATCTCTTGAACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR CAA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCAGAGCTGATACTGGAGTaGGCAGATGCCCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: GWKPGWGGRPISGESTPAELILE*ADALGQ
Trigger: CTGCCCCAGGGCATCTGCCAACTCCAGTATCAGCTC...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCTCAGTCCTGTCAGCTaGGACTCAACCCTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLLSPVS*DSTLPE
Trigger: CTCTGGCAGGGTTGAGTCCAAGCTGACAGGACTGAG...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538502.5
CDS-3UTR CAA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTCGGAGGGAGGTCACGTaGGTAAAGTCCGTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: ILELADALGQAPCRTHRSRREVT*VKSVSP
Trigger: CGGAGAGACGGACTTTACCAACGTGACCTCCCTCCG...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp CGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGGGTGAACGTGTAGGTTaGCCAGCATTGACCTTCGTC +
Preference number: 5 (lower is better)
Translates to: RGGNQDGEGDPSVESPLLGERVG*PALTFV
Trigger: GACGAAGGTCAATGCTGGCAAACCTACACGTTCACC...CAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTACACCATCCACACCATaGGCCTCTGCATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTTPSTP*ASACCC
Trigger: GCAGCAGCATGCAGAGGCCAATGGTGTGGATGGTGT...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTGAGCTGATACTGGAGTaGGCAGATGCCCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: ILELADALGQAPCRTHRSELILE*ADALGQ
Trigger: CTGCCCCAGGGCATCTGCCAACTCCAGTATCAGCTC...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAACTTCGGAGAGCACGCTaGTTATGTAGACGCCGCGGA +
Preference number: 5 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQLRRAR*LCRRRG
Trigger: TCCGCGGCGTCTACATAACAAGCGTGCTCTCCGAAG...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGAACTCGGACCACTTaGGACTGGTTTGTCCAATCT +
Preference number: 5 (lower is better)
Translates to: PTELASPGWKPGWGGRPIRTRTT*DWFVQS
Trigger: AGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCT...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS GCA 90 bp GTGTCCAAAGCATCCACACCATCCACACCATTGGCCTCTGCATGCTaGTGCAGCACAGAGTATCGATGCACCAGGAACCTTCCCCCACAG +
Preference number: 5 (lower is better)
Translates to: VSKASTPSTPLASAC*CSTEYRCTRNLPPQ
Trigger: CTGTGGGGGAAGGTTCCTGGTGCATCGATACTCTGTGCTGCAGCAGCATGCAGAGGCCAATGGTGTGGATGGTGTGGATGCTTTGGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS GCA 90 bp GCTGTGTCCAAAGCATCCACACCATCCACACCATTGGCCTCTGCATaGTGCTGCAGCACAGAGTATCGATGCACCAGGAACCTTCCCCCA +
Preference number: 5 (lower is better)
Translates to: AVSKASTPSTPLASA*CCSTEYRCTRNLPP
Trigger: TGGGGGAAGGTTCCTGGTGCATCGATACTCTGTGCTGCAGCAGCATGCAGAGGCCAATGGTGTGGATGGTGTGGATGCTTTGGACACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACGTGTTGTTGGCCAGCTaGGCGACGAAGTCCCGGACC +
Preference number: 5 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDVLLAS*ATKSRT
Trigger: GGTCCGGGACTTCGTCGCCAAGCTGGCCAACAACAC...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS-3UTR CAA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGCTTCGGAGAGCACGCTaGTTATGTAGACGCCGCGGA +
Preference number: 5 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRLRRAR*LCRRRG
Trigger: TCCGCGGCGTCTACATAACAAGCGTGCTCTCCGAAG...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS GCA 90 bp TCCAAAGCATCCACACCATCCACACCATTGGCCTCTGCATGCTGCTaGAGCACAGAGTATCGATGCACCAGGAACCTTCCCCCACAGACA +
Preference number: 5 (lower is better)
Translates to: SKASTPSTPLASACC*STEYRCTRNLPPQT
Trigger: TGTCTGTGGGGGAAGGTTCCTGGTGCATCGATACTCTGTGCTGCAGCAGCATGCAGAGGCCAATGGTGTGGATGGTGTGGATGCTTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TCTGCGCAGCCCAACTTCTGCAAGCGCTCAAGAGTTAATTACTCCTTCACCTTCGTGTTGTTGGCCAGCTaGGCGACGAAGTCCCGGACC +
Preference number: 5 (lower is better)
Translates to: SAQPNFCKRSRVNYSFTFVLLAS*ATKSRT
Trigger: GGTCCGGGACTTCGTCGCCAAGCTGGCCAACAACAC...GAAGGTGAAGGAGTAATTAACTCTTGAGCGCTTGCAGAAGTTGGGCTGCGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR CAA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACACATGCTGGTGCGTGTaGTTGGCCAGCTTGGCGACG +
Preference number: 5 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDTCWCV*LASLAT
Trigger: CGTCGCCAAGCTGGCCAACAACACGCACCAGCATGT...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS-3UTR CAA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACCGGAGGGAGGTCACGTaGGTAAAGTCCGTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDRREVT*VKSVSP
Trigger: CGGAGAGACGGACTTTACCAACGTGACCTCCCTCCG...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCAACAGGCACGGAGCTCTaGAGAGCACTGCTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPTGTEL*RALLKG
Trigger: TCCTTTGAGCAGTGCTCTCAAGAGCTCCGTGCCTGT...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTTTTCCCCCAAAATTCTaGGACACCCACAGGCCATTT +
Preference number: 5 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTFPPKF*DTHRPF
Trigger: AAATGGCCTGTGGGTGTCCAAGAATTTTGGGGGAAA...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCGTAAAGAAGATGGTGTaGTCTGATCCCCATTTGGCC +
Preference number: 5 (lower is better)
Translates to: ADRTESLAPADSGPPCHFVKKMV*SDPHLA
Trigger: GGCCAAATGGGGATCAGACAACACCATCTTCTTTAC...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAAGTAGGTTTGCCAGCATaGACCTTCGTCTGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQVGLPA*TFVCGE
Trigger: TTCTCCACAGACGAAGGTCAATGCTGGCAAACCTAC...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCACACCATCCACACCATaGGCCTCTGCATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: YPTINSREEIIQPGQTSSTPSTP*ASACCC
Trigger: GCAGCAGCATGCAGAGGCCAATGGTGTGGATGGTGT...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS TCA 90 bp CCCCACGCTACCATGAGCAATGACAATGCCTACGGCATTCGGCTCTaGGAGTGGGGCCATTGGAACATTCAGTTTCTGGGAGATGCTGTA +
Preference number: 5 (lower is better)
Translates to: PHATMSNDNAYGIRL*EWGHWNIQFLGDAV
Trigger: TACAGCATCTCCCAGAAACTGAATGTTCCAATGGCCCCACTCTCAGAGCCGAATGCCGTAGGCATTGTCATTGCTCATGGTAGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256637.8
ENST00000466471.1
ENST00000538502.5
CDS CCA 90 bp CACAGAGAAAGTCCTCCAGGGAACAGAGGCAGATGGAGGGCTGCTTaGTCACAACATAGTCTCGACCATTCTGACACACGGATGACTTGC +
Preference number: 5 (lower is better)
Translates to: HRESPPGNRGRWRAA*SQHSLDHSDTRMTC
Trigger: GCAAGTCATCCGTGTGTCAGAATGGTCGAGACTATGTTGTGACCAAGCAGCCCTCCATCTGCCTCTGTTCCCTGGAGGACTTTCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp CCAACAGAGCTAGCCAGCCCGGGGTGGAAACCAGGATGGGGAGGGAGACCCATCTTCACACCAATAGTTTaGAAGCTTTTTCCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: PTELASPGWKPGWGGRPIFTPIV*KLFPKS
Trigger: AGACTTGGGAAAAAGCTTCAAAACTATTGGTGTGAA...GATGGGTCTCCCTCCCCATCCTGGTTTCCACCCCGGGCTGGCTAGCTCTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GGGTGGAAACCAGGATGGGGAGGGAGACCCATCAGTGGAGAGTCCACTCCTGCAAAACGTGGATCCTTCTaGTTGTATCCTTATCAGCCA +
Preference number: 5 (lower is better)
Translates to: GWKPGWGGRPISGESTPAKRGSF*LYPYQP
Trigger: TGGCTGATAAGGATACAACAAGAAGGATCCACGTTT...TGCAGGAGTGGACTCTCCACTGATGGGTCTCCCTCCCCATCCTGGTTTCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGCGTCCACCTTCCTCCTaGGTCAAAAGTGATCATGGT +
Preference number: 5 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRRPPSS*VKSDHG
Trigger: ACCATGATCACTTTTGACCAAGGAGGAAGGTGGACG...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATGGCTGTTCCACACACTaGGAGTCATTTTCTGGACGG +
Preference number: 5 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDGCSTH*ESFSGR
Trigger: CCGTCCAGAAAATGACTCCAAGTGTGTGGAACAGCC...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACAGTACCAAATTCACTTaGGGCAGGAGGGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDSTKFT*GRREGG
Trigger: CCCACCCTCCCTCCTGCCCAAAGTGAATTTGGTACT...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGGAGGATTACCATGTATaGGTGCATCTGCCCACAGTG +
Preference number: 5 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIREDYHV*VHLPTV
Trigger: CACTGTGGGCAGATGCACCAATACATGGTAATCCTC...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCATGCACTCTAGGTCATaGTGGACAGGCACGGAGCTC +
Preference number: 5 (lower is better)
Translates to: YPTINSREEIIQPGQTSSMHSRS*WTGTEL
Trigger: GAGCTCCGTGCCTGTCCACAATGACCTAGAGTGCAT...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp ACTTCTGCAAGCGCTCAAGAGTTAATTACTCCTTCACCTTCCTGGGGCCTAACAGACAACTGGTGCGTGTaGTTGGCCAGCTTGGCGACG +
Preference number: 5 (lower is better)
Translates to: TSASAQELITPSPSWGLTDNWCV*LASLAT
Trigger: CGTCGCCAAGCTGGCCAACAACACGCACCAGTTGTC...TGTTAGGCCCCAGGAAGGTGAAGGAGTAATTAACTCTTGAGCGCTTGCAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS TCA 90 bp CACGGAGGGGAGCTGGGCCATGCTCCATGTGTCCCCTTGATCTGTTaGAACGTGGATCCTTCTTGTTGTATCCTTATCAGCCATCACAGA +
Preference number: 5 (lower is better)
Translates to: HGGELGHAPCVPLIC*NVDPSCCILISHHR
Trigger: TCTGTGATGGCTGATAAGGATACAACAAGAAGGATCCACGTTTCAACAGATCAAGGGGACACATGGAGCATGGCCCAGCTCCCCTCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTTTGTCTGATCCCCATTaGGCCAAACATACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: ILELADALGQAPCRTHRSLSDPH*AKHTAL
Trigger: CAAAGCAGTATGTTTGGCCAAATGGGGATCAGACAA...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGTGTCCCCTTGATCTGTaGAAACGTGGATCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRCPLDL*KRGSFL
Trigger: CAAGAAGGATCCACGTTTCAACAGATCAAGGGGACA...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCCTGAGAGTGGGGCCATaGGAACATTCAGTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: VYPTINSREEIIQPGQTSLRVGP*EHSVSG
Trigger: CCCAGAAACTGAATGTTCCAATGGCCCCACTCTCAG...GGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCGGCTGTTCCACACACTaGGAGTCATTTTCTGGACGG +
Preference number: 5 (lower is better)
Translates to: YPTINSREEIIQPGQTSSGCSTH*ESFSGR
Trigger: CCGTCCAGAAAATGACTCCAAGTGTGTGGAACAGCC...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAATCCGGTACCCATTTGTaGTTAGGTGTTCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQSGTHL*LGVLLF
Trigger: GAAGAGAAGAACACCTAACAACAAATGGGTACCGGA...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp CTATCTCCAACCCAGGACAAGGATACTGAGCCTCTGAGATCATCAAACACATGCAACTGGTGCGTGTTGTaGGCCAGCTTGGCGACGAAG +
Preference number: 5 (lower is better)
Translates to: LSPTQDKDTEPLRSSNTCNWCVL*ASLATK
Trigger: CTTCGTCGCCAAGCTGGCCAACAACACGCACCAGTT...GCATGTGTTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGGGTTGGAGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS GCA 90 bp CGGATGACTTGCGTAGCCGCAGAAACTGTTCTTTGTAGCCCAAAATaGAGCCATCTTCATAATCTTCAGGGTCTGTGGAGTGTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: RMTCVAAETVLCSPK*SHLHNLQGLWSVPA
Trigger: GGCTGGCACACTCCACAGACCCTGAAGATTATGAAGATGGCTGCATTTTGGGCTACAAAGAACAGTTTCTGCGGCTACGCAAGTCATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS CCA 90 bp TTCTCTTCCGTACAGACAAAACTCCAGGTCGTGGCCCTTCAGTTCTaGCTGTTCCACACACTTGGAGTCATTTTCTGGACGGTAGTAGCC +
Preference number: 5 (lower is better)
Translates to: FSSVQTKLQVVALQF*LFHTLGVIFWTVVA
Trigger: GGCTACTACCGTCCAGAAAATGACTCCAAGTGTGTGGAACAGCCAGAACTGAAGGGCCACGACCTGGAGTTTTGTCTGTACGGAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACGTAGGTTTGCCAGCATaGACCTTCGTCTGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDVGLPA*TFVCGE
Trigger: TTCTCCACAGACGAAGGTCAATGCTGGCAAACCTAC...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCATCCGGTACCCATTTGTaGTTAGGTGTTCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPSGTHL*LGVLLF
Trigger: GAAGAGAAGAACACCTAACAACAAATGGGTACCGGA...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GAAGGCAGCTGTCCCACAGCCTGGGGAAGGACCACATGCTCAGAAAGGGAACAAAGGTGCTCTGAAAATTaGCCAAGTTCCACAGAAATC +
Preference number: 5 (lower is better)
Translates to: EGSCPTAWGRTTCSEREQRCSEN*PSSTEI
Trigger: GATTTCTGTGGAACTTGGCAAATTTTCAGAGCACCT...TTGTTCCCTTTCTGAGCATGTGGTCCTTCCCCAGGCTGTGGGACAGCTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GCAGACAGAACAGAAAGTCTGGCACCTGCTGACTCCGGCCCTCCCTGTCACTTCCCACTTTGGACTGGTTaGTCCAATCTCTCTTATAAT +
Preference number: 5 (lower is better)
Translates to: ADRTESLAPADSGPPCHFPLWTG*SNLSYN
Trigger: ATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGG...GAAGTGACAGGGAGGGCCGGAGTCAGCAGGTGCCAGACTTTCTGTTCTGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp CAGGGAACAGTCAGTCACCCGCTTGTGGCTGAGGGCATGCGGAGGATGAGAACTTCTCTATCTGGATGGTaGGCCTGGAAACTAAATAAT +
Preference number: 5 (lower is better)
Translates to: QGTVSHPLVAEGMRRMRTSLSGW*AWKLNN
Trigger: ATTATTTAGTTTCCAGGCCAACCATCCAGATAGAGA...AGTTCTCATCCTCCGCATGCCCTCAGCCACAAGCGGGTGACTGACTGTTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGACAGGCACGGAGCTCTaGAGAGCACTGCTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: AETELGPSQWEIYFLKLETGTEL*RALLKG
Trigger: TCCTTTGAGCAGTGCTCTCAAGAGCTCCGTGCCTGT...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS GCA 90 bp CAGGAACCTTCCCCCACAGACATATTTCTTCACAATGAGCACTCCTaGTACGACTGTGACCAGCATCAATCCCACGATGGCCAGGATAAT +
Preference number: 5 (lower is better)
Translates to: QEPSPTDIFLHNEHS*YDCDQHQSHDGQDN
Trigger: ATTATCCTGGCCATCGTGGGATTGATGCTGGTCACAGTCGTAGCAGGAGTGCTCATTGTGAAGAAATATGTCTGTGGGGGAAGGTTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS GCA 90 bp AGAGGTCCTTCCCCCACAGACATATTTCTTCACAATGAGCACTCCTaGTACGACTGTGACCAGCATCAATCCCACGATGGCCAGGATAAT +
Preference number: 5 (lower is better)
Translates to: RGPSPTDIFLHNEHS*YDCDQHQSHDGQDN
Trigger: ATTATCCTGGCCATCGTGGGATTGATGCTGGTCACAGTCGTAGCAGGAGTGCTCATTGTGAAGAAATATGTCTGTGGGGGAAGGACCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485149.1
CDS CCA 90 bp GTGGCCCTTCAGTTCTGGCTGTTCCACACACTTGGAGTCATTTTCTaGACGGTAGTAGCCAAAATCACAGAGAAAGTCCTCCAGGGAACA +
Preference number: 5 (lower is better)
Translates to: VALQFWLFHTLGVIF*TVVAKITEKVLQGT
Trigger: TGTTCCCTGGAGGACTTTCTCTGTGATTTTGGCTACTACCGTCCAGAAAATGACTCCAAGTGTGTGGAACAGCCAGAACTGAAGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTTCACTTCGATATAGCTaGGACTGTCCAAAAGTCATA +
Preference number: 5 (lower is better)
Translates to: ILELADALGQAPCRTHRSSLRYS*DCPKVI
Trigger: TATGACTTTTGGACAGTCCAAGCTATATCGAAGTGA...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATCGTGGATCCTTCTTGTaGTATCCTTATCAGCCATCA +
Preference number: 5 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDRGSFL*YPYQPS
Trigger: TGATGGCTGATAAGGATACAACAAGAAGGATCCACG...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GAAGTCCATTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATAGTACCAAATTCACTTaGGGCAGGAGGGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: EVHSEADVDSTFQLRLIYSTKFT*GRREGG
Trigger: CCCACCCTCCCTCCTGCCCAAAGTGAATTTGGTACT...ATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAATGGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS GCA 90 bp GCTTGGTCACAACATAGTCTCGACCATTCTGACACACGGATGACTTaGGTAGCCGCAGAAACTGTTCTTTGTAGCCCAAAATGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: AWSQHSLDHSDTRMT*VAAETVLCSPKCSH
Trigger: ATGGCTGCATTTTGGGCTACAAAGAACAGTTTCTGCGGCTACGCAAGTCATCCGTGTGTCAGAATGGTCGAGACTATGTTGTGACCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp ATACTGGAGTTGGCAGATGCCCTGGGGCAGGCGCCATGCAGAACACACAGAAGTTTCACACCAATAGTTTaGAAGCTTTTTCCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: ILELADALGQAPCRTHRSFTPIV*KLFPKS
Trigger: AGACTTGGGAAAAAGCTTCAAAACTATTGGTGTGAA...ACTTCTGTGTGTTCTGCATGGCGCCTGCCCCAGGGCATCTGCCAACTCCAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GAAGTCCATTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATGTCCTTCCAGCATCTTaGTCCAGGAGTAACCCCCAT +
Preference number: 5 (lower is better)
Translates to: EVHSEADVDSTFQLRLIYVLPAS*SRSNPH
Trigger: ATGGGGGTTACTCCTGGACAAAGATGCTGGAAGGAC...ATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAATGGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GAAGTCCATTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATGGTGAACGTGTAGGTTaGCCAGCATTGACCTTCGTC +
Preference number: 5 (lower is better)
Translates to: EVHSEADVDSTFQLRLIYGERVG*PALTFV
Trigger: GACGAAGGTCAATGCTGGCAAACCTACACGTTCACC...ATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAATGGACTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp CCAAAACCCTCCTCCCTAGAGGTCCAAACACAGGAGGTGGGCCAAATCATCAGGGGAACAGAATTTGACTaGGAATTCTGTTTTTCCGGA +
Preference number: 5 (lower is better)
Translates to: PKPSSLEVQTQEVGQIIRGTEFD*EFCFSG
Trigger: TCCGGAAAAACAGAATTCCAAGTCAAATTCTGTTCC...CCTGATGATTTGGCCCACCTCCTGTGTTTGGACCTCTAGGGAGGAGGGTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATAGGTGCTCTGAAAATTaGCCAAGTTCCACAGAAATC +
Preference number: 5 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDRCSEN*PSSTEI
Trigger: GATTTCTGTGGAACTTGGCAAATTTTCAGAGCACCT...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TCGGGGGTTCACACTGTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGTACAAGAAGGCAGCCTaGCTCAAAGTGGTTAGCACT +
Preference number: 5 (lower is better)
Translates to: SGVHTVYPTINSREEIIQYKKAA*LKVVST
Trigger: AGTGCTAACCACTTTGAGCAAGGCTGCCTTCTTGTA...CTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACACAGTGTGAACCCCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GCACATTACCAGCCTGTCAAGGATGAAAGACCACCTTGGGCATGGAGAGGCCCATCTCTATCTGGATGGTaGGCCTGGAAACTAAATAAT +
Preference number: 5 (lower is better)
Translates to: AHYQPVKDERPPWAWRGPSLSGW*AWKLNN
Trigger: ATTATTTAGTTTCCAGGCCAACCATCCAGATAGAGA...TGGGCCTCTCCATGCCCAAGGTGGTCTTTCATCCTTGACAGGCTGGTAATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp CTATCTCCAACCCAGGACAAGGATACTGAGCCTCTGAGATCATCAAACACATGCCATCAAACACATGCTTaGCTTCTGCGCAGCCCAACT +
Preference number: 5 (lower is better)
Translates to: LSPTQDKDTEPLRSSNTCHQTHA*LLRSPT
Trigger: AGTTGGGCTGCGCAGAAGCAAAGCATGTGTTTGATG...GCATGTGTTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGGGTTGGAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS TCA 90 bp AGAACATTCCCCCAGTTGCCCTCTATGCAGACAGTGTGTGTGAGATaGGTTCATGCATACTTAATCACATTGATAGGACGGCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: RTFPQLPSMQTVCVR*VHAYLITLIGRLLC
Trigger: GCACAGCAGCCGTCCTATCAATGTGATTAAGTATGCATGAACTCATCTCACACACACTGTCTGCATAGAGGGCAACTGGGGGAATGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466471.1
CDS TCA 90 bp GGGGCTAAAGGTCTGACTATACATTGCATGAGAGAAGACTCTTCATaGAGGTTTCGCTCACTCTGCTCAACCAGGACCAAGAAGGAGATC +
Preference number: 5 (lower is better)
Translates to: GAKGLTIHCMREDSS*RFRSLCSTRTKKEI
Trigger: GATCTCCTTCTTGGTCCTGGTTGAGCAGAGTGAGCGAAACCTTCATGAAGAGTCTTCTCTCATGCAATGTATAGTCAGACCTTTAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633956.1
CDS GCA 90 bp GTCTCCAGGTTCATCTACATGCATGAATACCATGTCATCATTTGCTaGCAGAATAGAATAGAACTGTTCCTGTCCCACGGAGGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: VSRFIYMHEYHVIIC*QNRIELFLSHGGEL
Trigger: CAGCTCCCCTCCGTGGGACAGGAACAGTTCTATTCTATTCTGGCAGCAAATGATGACATGGTATTCATGCATGTAGATGAACCTGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGTTTCCCCCAAAATTCTaGGACACCCACAGGCCATTT +
Preference number: 5 (lower is better)
Translates to: AETELGPSQWEIYFLKLEFPPKF*DTHRPF
Trigger: AAATGGCCTGTGGGTGTCCAAGAATTTTGGGGGAAA...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GATCTGTGTGAGGAGCTGGTGTGCAGTGTTCTTGGAGTAGGACTGTCCCCAGATGCCAAACATACTGCTTaGTGGATTTCTTCCCATTTT +
Preference number: 5 (lower is better)
Translates to: DLCEELVCSVLGVGLSPDAKHTA*WISSHF
Trigger: AAAATGGGAAGAAATCCACAAAGCAGTATGTTTGGC...ATCTGGGGACAGTCCTACTCCAAGAACACTGCACACCAGCTCCTCACACAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGGTAAAGAAGATGGTGTaGTCTGATCCCCATTTGGCC +
Preference number: 5 (lower is better)
Translates to: AETELGPSQWEIYFLKLEVKKMV*SDPHLA
Trigger: GGCCAAATGGGGATCAGACAACACCATCTTCTTTAC...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGTGTCCCCTTGATCTGTaGAAACGTGGATCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: AETELGPSQWEIYFLKLECPLDL*KRGSFL
Trigger: CAAGAAGGATCCACGTTTCAACAGATCAAGGGGACA...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGGAGAACTTAATCACATaGATAGGACGGCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: AETELGPSQWEIYFLKLEENLIT*IGRLLC
Trigger: GCACAGCAGCCGTCCTATCAATGTGATTAAGTTCTC...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GAAGTCCATTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATGAGGATTACCATGTATaGGTGCATCTGCCCACAGTG +
Preference number: 5 (lower is better)
Translates to: EVHSEADVDSTFQLRLIYEDYHV*VHLPTV
Trigger: CACTGTGGGCAGATGCACCAATACATGGTAATCCTC...ATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAATGGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TCGGGGGTTCACACTGTGTACCCGACAATCAACTCTAGGGAAGAGATCATTCAGAAGATGGTAGCAAAGTaGAAAGCCGAATCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: SGVHTVYPTINSREEIIQKMVAK*KAESLP
Trigger: AGGAAGGGATTCGGCTTTCAACTTTGCTACCATCTT...CTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTACACAGTGTGAACCCCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp AGAGTTGCCATTGAATTAAAAGCCTACAGGAGAGACGGGCCTGGTCTGTGGTCTAAGATGGTAGCAAAGTaGAAAGCCGAATCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: RVAIELKAYRRDGPGLWSKMVAK*KAESLP
Trigger: AGGAAGGGATTCGGCTTTCAACTTTGCTACCATCTT...AGACCACAGACCAGGCCCGTCTCTCCTGTAGGCTTTTAATTCAATGGCAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS TCA 90 bp GAGATGTCGGTCCAAAGACTTGGAATAGACAATGCCTCGATCATCTaGGGTAAAGATTGTGCCAAACCCAGTGTCTCCAGGTTCATCTAC +
Preference number: 5 (lower is better)
Translates to: EMSVQRLGIDNASII*GKDCAKPSVSRFIY
Trigger: GTAGATGAACCTGGAGACACTGGGTTTGGCACAATCTTTACCTCAGATGATCGAGGCATTGTCTATTCCAAGTCTTTGGACCGACATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS GCA 90 bp TCGGCTCTGAGAGTGGGGCCATTGGAACATTCAGTTTCTGGGAGATaGTGTAGGAAGCATGAATATGAAGGCTGCACTCATTCTTGTTTT +
Preference number: 5 (lower is better)
Translates to: SALRVGPLEHSVSGR*CRKHEYEGCTHSCF
Trigger: AAAACAAGAATGAGTGCAGCCTTCATATTCATGCTTCCTACAGCATCTCCCAGAAACTGAATGTTCCAATGGCCCCACTCTCAGAGCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256637.8
ENST00000466471.1
ENST00000538502.5
CDS GCA 90 bp GCCCAAAATGCAGCCATCTTCATAATCTTCAGGGTCTGTGGAGTGTaGCAGCCATATGGTATAGTCCTTCTCTTCACAGTTCCTTTCAAG +
Preference number: 5 (lower is better)
Translates to: AQNAAIFIIFRVCGV*QPYGIVLLFTVPFK
Trigger: CTTGAAAGGAACTGTGAAGAGAAGGACTATACCATATGGCTGGCACACTCCACAGACCCTGAAGATTATGAAGATGGCTGCATTTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS CCA 90 bp CCAACTTCTGCAAGCGCTCAAGAGTTAATTACTCCTTCACCTTCCTaGGGCCTAACAGCGTTACTGGGTCCTGATTATTTATACAGACGA +
Preference number: 5 (lower is better)
Translates to: PTSASAQELITPSPS*GLTALLGPDYLYRR
Trigger: TCGTCTGTATAAATAATCAGGACCCAGTAACGCTGTTAGGCCCCAGGAAGGTGAAGGAGTAATTAACTCTTGAGCGCTTGCAGAAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS-3UTR CAA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGTTGTCTGATCCCCATTaGGCCAAACATACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: AETELGPSQWEIYFLKLELSDPH*AKHTAL
Trigger: CAAAGCAGTATGTTTGGCCAAATGGGGATCAGACAA...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCGGAACAGAATTTGACTaGGAATTCTGTTTTTCCGGA +
Preference number: 5 (lower is better)
Translates to: YPTINSREEIIQPGQTSSGTEFD*EFCFSG
Trigger: TCCGGAAAAACAGAATTCCAAGTCAAATTCTGTTCC...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TACCCGACAATCAACTCTAGGGAAGAGATCATTCAGCCTGGGCAGACTTCCAGCCCACTTTGGACTGGTTaGTCCAATCTCTCTTATAAT +
Preference number: 5 (lower is better)
Translates to: YPTINSREEIIQPGQTSSPLWTG*SNLSYN
Trigger: ATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGG...GCTGGAAGTCTGCCCAGGCTGAATGATCTCTTCCCTAGAGTTGATTGTCGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TCCGTATCCTGGTATCGTGACGAAGGCCATGAGAACCAGCTCTGGTTTACAGACAAAAGGGAGATCTGTTaGCACAAAATTCTTCGCAAA +
Preference number: 5 (lower is better)
Translates to: SVSWYRDEGHENQLWFTDKREIC*HKILRK
Trigger: TTTGCGAAGAATTTTGTGCAAACAGATCTCCCTTTT...GTCTGTAAACCAGAGCTGGTTCTCATGGCCTTCGTCACGATACCAGGATACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCATGCACTCTAGGTCATaGTGGACAGGCACGGAGCTC +
Preference number: 5 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCMHSRS*WTGTEL
Trigger: GAGCTCCGTGCCTGTCCACAATGACCTAGAGTGCAT...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp AAGCGCTCAAGAGTTAATTACTCCTTCACCTTCCTGGGGCCTAACAGCGTTACTGATGTTCAAGAGATTTaGACAACTGGTGCGTGTTGT +
Preference number: 5 (lower is better)
Translates to: KRSRVNYSFTFLGPNSVTDVQEI*TTGACC
Trigger: ACAACACGCACCAGTTGTCAAAATCTCTTGAACATC...AGTAACGCTGTTAGGCCCCAGGAAGGTGAAGGAGTAATTAACTCTTGAGCGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS CCA 90 bp CGATATAGCTTGGACTGTCCAAAAGTCATAATTACCAGTGGTACATaGAAGGTAGTCAAGACTAGAATGACCCCAGTGCTATCTCCAACC +
Preference number: 5 (lower is better)
Translates to: RYSLDCPKVIITSGT*KVVKTRMTPVLSPT
Trigger: GGTTGGAGATAGCACTGGGGTCATTCTAGTCTTGACTACCTTCCATGTACCACTGGTAATTATGACTTTTGGACAGTCCAAGCTATATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256637.8
ENST00000482236.5
ENST00000483508.5
ENST00000493736.5
ENST00000538502.5
ENST00000633956.1
CDS CCA 90 bp TCTAATATAACTATCATGTGCCTCAATGCTATGACACATGCATTATaGAATACCAGGGGGCAGGAGATGTTGCCCCTGCTCTTGTTCAAG +
Preference number: 5 (lower is better)
Translates to: SNITIMCLNAMTHAL*NTRGQEMLPLLLFK
Trigger: CTTGAACAAGAGCAGGGGCAACATCTCCTGCCCCCTGGTATTCCATAATGCATGTGTCATAGCATTGAGGCACATGATAGTTATATTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495777.5
CDS-3UTR CAA 90 bp GCAGAAACAGAGCTGGGTCCCTCGCAATGGGAAATTTATTTCCTGAAGTTGGAGGCCAAACATACTGCTTaGTGGATTTCTTCCCATTTT +
Preference number: 5 (lower is better)
Translates to: AETELGPSQWEIYFLKLEAKHTA*WISSHF
Trigger: AAAATGGGAAGAAATCCACAAAGCAGTATGTTTGGC...CTCCAACTTCAGGAAATAAATTTCCCATTGCGAGGGACCCAGCTCTGTTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TCTCTTATAATGCTAAATTCCATTGCTGAAGCCTCCAGAAATGATCTCTTCTGCGTCCTTCCAGCATCTTaGTCCAGGAGTAACCCCCAT +
Preference number: 5 (lower is better)
Translates to: SLIMLNSIAEASRNDLFCVLPAS*SRSNPH
Trigger: ATGGGGGTTACTCCTGGACAAAGATGCTGGAAGGAC...GCAGAAGAGATCATTTCTGGAGGCTTCAGCAATGGAATTTAGCATTATAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp GAAGTCCATTCAGAGGCAGACGTAGATTCTACGTTCCAGTTACGGCTGATCTATTTTTCCGGTACCCATTaGTTGTTAGGTGTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: EVHSEADVDSTFQLRLIYFSGTH*LLGVLL
Trigger: GAGAAGAACACCTAACAACAAATGGGTACCGGAAAA...ATAGATCAGCCGTAACTGGAACGTAGAATCTACGTCTGCCTCTGAATGGACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS CCA 90 bp TCTGAGATCATCAAACACATGCTAATTGTTAACACTGCATTCCCTTaGAGCCATCTGTCATACCTGGCTAGCTTTCTACTCTCATCCCAA +
Preference number: 5 (lower is better)
Translates to: SEIIKHMLIVNTAFP*SHLSYLASFLLSSQ
Trigger: TTGGGATGAGAGTAGAAAGCTAGCCAGGTATGACAGATGGCTCCAAGGGAATGCAGTGTTAACAATTAGCATGTGTTTGATGATCTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633956.1
CDS-3UTR CAA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTCGTCCACCTTCCTCCTaGGTCAAAAGTGATCATGGT +
Preference number: 5 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCRPPSS*VKSDHG
Trigger: ACCATGATCACTTTTGACCAAGGAGGAAGGTGGACG...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TTTAAGAACTCGGACCACTTTGGACTGGTTTGTCCAATCTCTCTTATAATGCTAGAGAACTTAATCACATaGATAGGACGGCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: FKNSDHFGLVCPISLIMLENLIT*IGRLLC
Trigger: GCACAGCAGCCGTCCTATCAATGTGATTAAGTTCTC...TAGCATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTCGTGGATCCTTCTTGTaGTATCCTTATCAGCCATCA +
Preference number: 5 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCRGSFL*YPYQPS
Trigger: TGATGGCTGATAAGGATACAACAAGAAGGATCCACG...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTGAAGCTGTAACAGATTaGGGCTTTCTTACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCEAVTD*GFLTLW
Trigger: CCAGAGAGTAAGAAAGCCCAAATCTGTTACAGCTTC...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS TCA 90 bp ACCAAGAAGGAGATCCTACAGAGTTCCTACTCCTTGATCCAAAGCTaGATGGAAGAAACAGAACTCAAGAGACTATTAAATAAGCTAGAC +
Preference number: 5 (lower is better)
Translates to: TKKEILQSSYSLIQS*MEETELKRLLNKLD
Trigger: GTCTAGCTTATTTAATAGTCTCTTGAGTTCTGTTTCTTCCATTCAGCTTTGGATCAAGGAGTAGGAACTCTGTAGGATCTCCTTCTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633956.1
CDS-3UTR CAA 90 bp AATGATCTCTTCTGCTACATCAAGCCTGGGAGTTTACACAATGATACACTATGTAAACGTGGATCCTTCTaGTTGTATCCTTATCAGCCA +
Preference number: 5 (lower is better)
Translates to: NDLFCYIKPGSLHNDTLCKRGSF*LYPYQP
Trigger: TGGCTGATAAGGATACAACAAGAAGGATCCACGTTT...ACATAGTGTATCATTGTGTAAACTCCCAGGCTTGATGTAGCAGAAGAGATCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS-3UTR CAA 90 bp TTTAAGAACTCGGACCACTTTGGACTGGTTTGTCCAATCTCTCTTATAATGCTATTTTCCGGTACCCATTaGTTGTTAGGTGTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: FKNSDHFGLVCPISLIMLFSGTH*LLGVLL
Trigger: GAGAAGAACACCTAACAACAAATGGGTACCGGAAAA...TAGCATTATAAGAGAGATTGGACAAACCAGTCCAAAGTGGTCCGAGTTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS TCA 90 bp CTATATTCTCAATGTTACTTAGTGAAATGCTCCAACGCGTGTTATTaGTCTCACCTTCGATATAGCTTGGACTGTCCAAAAGTCATAATT +
Preference number: 5 (lower is better)
Translates to: LYSQCYLVKCSNACY*SHLRYSLDCPKVII
Trigger: AATTATGACTTTTGGACAGTCCAAGCTATATCGAAGGTGAGATCAATAACACGCGTTGGAGCATTTCACTAAGTAACATTGAGAATATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483508.5
CDS CCA 72 bp CATCAAACACATGCTGGTGCGTGTTGTTGGCCAGCTTaGCGACGAAGTCCCGGACCCGGCCGCACTCCTCGT +
Preference number: 6 (lower is better)
Translates to: HQTHAGACCWPA*RRSPGPGRTPR
Trigger: ACGAGGAGTGCGGCCGGGTCCGGGACTTCGTCGCCAAGCTGGCCAACAACACGCACCAGCATGTGTTTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS CAA 72 bp TCATCAAACACATGCTGGTGCGTGTTGTTGGCCAGCTaGGCGACGAAGTCCCGGACCCGGCCGCACTCCTCG +
Preference number: 6 (lower is better)
Translates to: SSNTCWCVLLAS*ATKSRTRPHSS
Trigger: CGAGGAGTGCGGCCGGGTCCGGGACTTCGTCGCCAAGCTGGCCAACAACACGCACCAGCATGTGTTTGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS CCA 72 bp GAGATTTTGACAACTGGTGCGTGTTGTTGGCCAGCTTaGCGACGAAGTCCCGGACCCGGCCGCACTCCTCGT +
Preference number: 6 (lower is better)
Translates to: EILTTGACCWPA*RRSPGPGRTPR
Trigger: ACGAGGAGTGCGGCCGGGTCCGGGACTTCGTCGCCAAGCTGGCCAACAACACGCACCAGTTGTCAAAATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS CAA 72 bp AGAGATTTTGACAACTGGTGCGTGTTGTTGGCCAGCTaGGCGACGAAGTCCCGGACCCGGCCGCACTCCTCG +
Preference number: 6 (lower is better)
Translates to: RDFDNWCVLLAS*ATKSRTRPHSS
Trigger: CGAGGAGTGCGGCCGGGTCCGGGACTTCGTCGCCAAGCTGGCCAACAACACGCACCAGTTGTCAAAATCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS CCA 72 bp GATGTTCAAGAGATTTTGACAACTGGTGCGTGTTGTTaGCCAGCTTGGCGACGAAGTCCCGGACCCGGCCGC +
Preference number: 6 (lower is better)
Translates to: DVQEILTTGACC*PAWRRSPGPGR
Trigger: GCGGCCGGGTCCGGGACTTCGTCGCCAAGCTGGCCAACAACACGCACCAGTTGTCAAAATCTCTTGAACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS CAA 90 bp GGCAGCTCCCTGAAGCCTCTGACAGGCACACTCAGTCCTGTCAGCTaGGACTCAACCCTGCCAGAGCCAGCAAACAAACACACGCATTCT +
Preference number: 6 (lower is better)
Translates to: GSSLKPLTGTLSPVS*DSTLPEPANKHTHS
Trigger: AGAATGCGTGTGTTTGTTTGCTGGCTCTGGCAGGGTTGAGTCCAAGCTGACAGGACTGAGTGTGCCTGTCAGAGGCTTCAGGGAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482236.5
ENST00000538502.5
CDS TCA 72 bp CTGTGGTTCCACCATCCATGCTGGGTCCAGCTCCTCTaGAGAGCTATTCCAAGAGGTCCTTCCCCCACAGAC +
Preference number: 6 (lower is better)
Translates to: LWFHHPCWVQLL*RAIPRGPSPTD
Trigger: GTCTGTGGGGGAAGGACCTCTTGGAATAGCTCTTCAGAGGAGCTGGACCCAGCATGGATGGTGGAACCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485149.1
CDS GCA 72 bp AGAACTGTTCCTGTCCCACGGAGGGGAGCTGGGCCATaGTCCATGTGTCCCCTTGATCTGTTGAAACGTGGA +
Preference number: 6 (lower is better)
Translates to: RTVPVPRRGAGP*SMCPLDLLKRG
Trigger: TCCACGTTTCAACAGATCAAGGGGACACATGGAGCATGGCCCAGCTCCCCTCCGTGGGACAGGAACAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS CAA 90 bp TTAGTGTGGGAGGCTGTGTCCAAAGCATCCACACCATCCACACCATaGGCCTCTGCATGCTGCTGCAGCACAGAGTATCGATGCACCAGG +
Preference number: 6 (lower is better)
Translates to: LVWEAVSKASTPSTP*ASACCCSTEYRCTR
Trigger: CCTGGTGCATCGATACTCTGTGCTGCAGCAGCATGCAGAGGCCAATGGTGTGGATGGTGTGGATGCTTTGGACACAGCCTCCCACACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS TCA 72 bp TGGGAGCCCAGCTGTATATCAGGAGGGATAAGGAGCTaGCTGATCCTCCTTCCATTCCCCCAATCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: WEPSCISGGIRS*LILLPFPQSWQ
Trigger: CTGCCAGGATTGGGGGAATGGAAGGAGGATCAGTCAGCTCCTTATCCCTCCTGATATACAGCTGGGCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495777.5
CDS CAA 72 bp CTGAAGCCTCTGACAGGCACACTCAGTCCTGTCAGCTaGGACTCAACCCTGCCAGAGCCAGCAAACAAACAC +
Preference number: 6 (lower is better)
Translates to: LKPLTGTLSPVS*DSTLPEPANKH
Trigger: GTGTTTGTTTGCTGGCTCTGGCAGGGTTGAGTCCAAGCTGACAGGACTGAGTGTGCCTGTCAGAGGCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482236.5
ENST00000538502.5
CDS TCA 72 bp ACGGAGGGGAGCTGGGCCATGCTCCATGTGTCCCCTTaGTCTGTTGAAACGTGGATCCTTCTTGTTGTATCC +
Preference number: 6 (lower is better)
Translates to: TEGSWAMLHVSP*SVETWILLVVS
Trigger: GGATACAACAAGAAGGATCCACGTTTCAACAGATCAAGGGGACACATGGAGCATGGCCCAGCTCCCCTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS GCA 72 bp AAAGCATCCACACCATCCACACCATTGGCCTCTGCATaGTGCTGCAGCACAGAGTATCGATGCACCAGGAAC +
Preference number: 6 (lower is better)
Translates to: KASTPSTPLASA*CCSTEYRCTRN
Trigger: GTTCCTGGTGCATCGATACTCTGTGCTGCAGCAGCATGCAGAGGCCAATGGTGTGGATGGTGTGGATGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS CCA 72 bp TTTCCTCTGGGACCTTCACATCCAAGACCAAAGCAATaGCCGGCCTCTGAAAGGGGAACTCTTCTTGGCTCC +
Preference number: 6 (lower is better)
Translates to: FPLGPSHPRPKQ*PASERGTLLGS
Trigger: GGAGCCAAGAAGAGTTCCCCTTTCAGAGGCCGGCCATTGCTTTGGTCTTGGATGTGAAGGTCCCAGAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493736.5
CDS CAA 90 bp CCACGGAGGGGAGCTGGGCCATGCTCCATGTGTCCCCTTGATCTGTaGAAACGTGGATCCTTCTTGTTGTATCCTTATCAGCCATCACAG +
Preference number: 6 (lower is better)
Translates to: PRRGAGPCSMCPLDL*KRGSFLLYPYQPSQ
Trigger: CTGTGATGGCTGATAAGGATACAACAAGAAGGATCCACGTTTCAACAGATCAAGGGGACACATGGAGCATGGCCCAGCTCCCCTCCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS TCA 72 bp GACCCCAGTGCTATCTCCAACCCAGGACAAGGATACTaGGCCTCTGAGATCATCAAACACATGCTGGTGCGT +
Preference number: 6 (lower is better)
Translates to: DPSAISNPGQGY*ASEIIKHMLVR
Trigger: ACGCACCAGCATGTGTTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGGGTTGGAGATAGCACTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS TCA 72 bp ACCTTCACATCCAAGACCAAAGCAATGGCCGGCCTCTaGAAGGGGAACTCTTCTTGGCTCCCCATTTCTACC +
Preference number: 6 (lower is better)
Translates to: TFTSKTKAMAGL*KGNSSWLPIST
Trigger: GGTAGAAATGGGGAGCCAAGAAGAGTTCCCCTTTCAGAGGCCGGCCATTGCTTTGGTCTTGGATGTGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493736.5
CDS CCA 72 bp AACACATGCTTCAGACTTCCGGGTGTTACAAAGGTCTaGCGATTCACAACAACAGGCCGAGGTCTTCAGCGG +
Preference number: 6 (lower is better)
Translates to: NTCFRLPGVTKV*RFTTTGRGLQR
Trigger: CCGCTGAAGACCTCGGCCTGTTGTTGTGAATCGCCAGACCTTTGTAACACCCGGAAGTCTGAAGCATGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482236.5
ENST00000538502.5
CDS CAA 72 bp CAATGCCTACGGCATTCGGCTCTGAGAGTGGGGCCATaGGAACATTCAGTTTCTGGGAGATGCTGTAGGAAG +
Preference number: 6 (lower is better)
Translates to: QCLRHSALRVGP*EHSVSGRCCRK
Trigger: CTTCCTACAGCATCTCCCAGAAACTGAATGTTCCAATGGCCCCACTCTCAGAGCCGAATGCCGTAGGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256637.8
ENST00000466471.1
ENST00000538502.5
CDS TCA 72 bp ACCATGAGCAATGACAATGCCTACGGCATTCGGCTCTaGGAGTGGGGCCATTGGAACATTCAGTTTCTGGGA +
Preference number: 6 (lower is better)
Translates to: TMSNDNAYGIRL*EWGHWNIQFLG
Trigger: TCCCAGAAACTGAATGTTCCAATGGCCCCACTCTCAGAGCCGAATGCCGTAGGCATTGTCATTGCTCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256637.8
ENST00000466471.1
ENST00000538502.5
CDS GCA 72 bp CATTATGGAATACCAGGGGGCAGGAGATGTTGCCCCTaGTCTTGTTCAAGCAGGATAATAAGACAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: HYGIPGGRRCCP*SCSSRIIRQPG
Trigger: GCCTGGCTGTCTTATTATCCTGCTTGAACAAGAGCAGGGGCAACATCTCCTGCCCCCTGGTATTCCATAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495777.5
CDS CCA 72 bp GGTCGTGGCCCTTCAGTTCTGGCTGTTCCACACACTTaGAGTCATTTTCTGGACGGTAGTAGCCAAAATCAC +
Preference number: 6 (lower is better)
Translates to: GRGPSVLAVPHT*SHFLDGSSQNH
Trigger: GTGATTTTGGCTACTACCGTCCAGAAAATGACTCCAAGTGTGTGGAACAGCCAGAACTGAAGGGCCACGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS CCA 72 bp GTACAGACAAAACTCCAGGTCGTGGCCCTTCAGTTCTaGCTGTTCCACACACTTGGAGTCATTTTCTGGACG +
Preference number: 6 (lower is better)
Translates to: VQTKLQVVALQF*LFHTLGVIFWT
Trigger: CGTCCAGAAAATGACTCCAAGTGTGTGGAACAGCCAGAACTGAAGGGCCACGACCTGGAGTTTTGTCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS CAA 72 bp TGGAATACCAGGGGGCAGGAGATGTTGCCCCTGCTCTaGTTCAAGCAGGATAATAAGACAGCCAGGCAACAA +
Preference number: 6 (lower is better)
Translates to: WNTRGQEMLPLL*FKQDNKTARQQ
Trigger: TTGTTGCCTGGCTGTCTTATTATCCTGCTTGAACAAGAGCAGGGGCAACATCTCCTGCCCCCTGGTATTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495777.5
CDS TCA 72 bp TGCTATCTCCAACCCAGGACAAGGATACTGAGCCTCTaGGATCATCAAACACATGCTGGTGCGTGTTGTTGG +
Preference number: 6 (lower is better)
Translates to: CYLQPRTRILSL*DHQTHAGACCW
Trigger: CCAACAACACGCACCAGCATGTGTTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGGGTTGGAGATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256637.8
CDS TCA 72 bp GAGCTGGGCCATGCTCCATGTGTCCCCTTGATCTGTTaGAACGTGGATCCTTCTTGTTGTATCCTTATCAGC +
Preference number: 6 (lower is better)
Translates to: ELGHAPCVPLIC*NVDPSCCILIS
Trigger: GCTGATAAGGATACAACAAGAAGGATCCACGTTTCAACAGATCAAGGGGACACATGGAGCATGGCCCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS TCA 72 bp TGCTATCTCCAACCCAGGACAAGGATACTGAGCCTCTaGGATCATCAAACACATGCTTCAGACTTCCGGGTG +
Preference number: 6 (lower is better)
Translates to: CYLQPRTRILSL*DHQTHASDFRV
Trigger: CACCCGGAAGTCTGAAGCATGTGTTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGGGTTGGAGATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482236.5
ENST00000538502.5
CDS TCA 72 bp GACCCCAGTGCTATCTCCAACCCAGGACAAGGATACTaGGCCTCTGAGATCATCAAACACATGCTTCAGACT +
Preference number: 6 (lower is better)
Translates to: DPSAISNPGQGY*ASEIIKHMLQT
Trigger: AGTCTGAAGCATGTGTTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGGGTTGGAGATAGCACTGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482236.5
ENST00000538502.5
CDS TCA 72 bp GACCCCAGTGCTATCTCCAACCCAGGACAAGGATACTaGGCCTCTGAGATCATCAAACACATGCTTCTGTTC +
Preference number: 6 (lower is better)
Translates to: DPSAISNPGQGY*ASEIIKHMLLF
Trigger: GAACAGAAGCATGTGTTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGGGTTGGAGATAGCACTGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493736.5
CDS CCA 72 bp ACTATCATGTGCCTCAATGCTATGACACATGCATTATaGAATACCAGGGGGCAGGAGATGTTGCCCCTGCTC +
Preference number: 6 (lower is better)
Translates to: TIMCLNAMTHAL*NTRGQEMLPLL
Trigger: GAGCAGGGGCAACATCTCCTGCCCCCTGGTATTCCATAATGCATGTGTCATAGCATTGAGGCACATGATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495777.5
CDS CAA 72 bp GGAGCTGGGCCATGCTCCATGTGTCCCCTTGATCTGTaGAAACGTGGATCCTTCTTGTTGTATCCTTATCAG +
Preference number: 6 (lower is better)
Translates to: GAGPCSMCPLDL*KRGSFLLYPYQ
Trigger: CTGATAAGGATACAACAAGAAGGATCCACGTTTCAACAGATCAAGGGGACACATGGAGCATGGCCCAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS CAA 90 bp CATGCATTATGGAATACCAGGGGGCAGGAGATGTTGCCCCTGCTCTaGTTCAAGCAGGATAATAAGACAGCCAGGCAACAAGTCCTGATT +
Preference number: 6 (lower is better)
Translates to: HALWNTRGQEMLPLL*FKQDNKTARQQVLI
Trigger: AATCAGGACTTGTTGCCTGGCTGTCTTATTATCCTGCTTGAACAAGAGCAGGGGCAACATCTCCTGCCCCCTGGTATTCCATAATGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495777.5
CDS TCA 72 bp TCAAGCAGGATAATAAGACAGCCAGGCAACAAGTCCTaGTTTAAGACCAGGGGCCAATGTATCCTCAGCGTG +
Preference number: 6 (lower is better)
Translates to: SSRIIRQPGNKS*FKTRGQCILSV
Trigger: CACGCTGAGGATACATTGGCCCCTGGTCTTAAATCAGGACTTGTTGCCTGGCTGTCTTATTATCCTGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495777.5
CDS CAA 72 bp GATGGGGTCCCTGGTGAACGTGTAGGTTTGCCAGCATaGACCTTCGTCTGTGGAGAACTTAATCACATTGAT +
Preference number: 6 (lower is better)
Translates to: DGVPGERVGLPA*TFVCGELNHID
Trigger: ATCAATGTGATTAAGTTCTCCACAGACGAAGGTCAATGCTGGCAAACCTACACGTTCACCAGGGACCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS CAA 90 bp AATGCTATGACACATGCATTATGGAATACCAGGGGGCAGGAGATGTaGCCCCTGCTCTTGTTCAAGCAGGATAATAAGACAGCCAGGCAA +
Preference number: 6 (lower is better)
Translates to: NAMTHALWNTRGQEM*PLLLFKQDNKTARQ
Trigger: TTGCCTGGCTGTCTTATTATCCTGCTTGAACAAGAGCAGGGGCAACATCTCCTGCCCCCTGGTATTCCATAATGCATGTGTCATAGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495777.5
CDS TCA 72 bp GTCCAAAGACTTGGAATAGACAATGCCTCGATCATCTaGGGTAAAGATTGTGCCAAACCCAGTGTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: VQRLGIDNASII*GKDCAKPSVSR
Trigger: CCTGGAGACACTGGGTTTGGCACAATCTTTACCTCAGATGATCGAGGCATTGTCTATTCCAAGTCTTTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS TCA 72 bp TGCTATCTCCAACCCAGGACAAGGATACTGAGCCTCTaGGATCATCAAACACATGCTTCTGTTCTGCTTTCC +
Preference number: 6 (lower is better)
Translates to: CYLQPRTRILSL*DHQTHASVLLS
Trigger: GGAAAGCAGAACAGAAGCATGTGTTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGGGTTGGAGATAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493736.5
CDS TCA 72 bp GGTCTGACTATACATTGCATGAGAGAAGACTCTTCATaGAGGTTTCGCTCACTCTGCTCAACCAGGACCAAG +
Preference number: 6 (lower is better)
Translates to: GLTIHCMREDSS*RFRSLCSTRTK
Trigger: CTTGGTCCTGGTTGAGCAGAGTGAGCGAAACCTTCATGAAGAGTCTTCTCTCATGCAATGTATAGTCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633956.1
CDS TCA 72 bp GACCCCAGTGCTATCTCCAACCCAGGACAAGGATACTaGGCCTCTGAGATCATCAAACACATGCTAATTGTT +
Preference number: 6 (lower is better)
Translates to: DPSAISNPGQGY*ASEIIKHMLIV
Trigger: AACAATTAGCATGTGTTTGATGATCTCAGAGGCTCAGTATCCTTGTCCTGGGTTGGAGATAGCACTGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000633956.1
CDS GCA 72 bp GCAGCCATCTTCATAATCTTCAGGGTCTGTGGAGTGTaGCAGCCATATGGTATAGTCCTTCTCTTCACAGTT +
Preference number: 6 (lower is better)
Translates to: AAIFIIFRVCGV*QPYGIVLLFTV
Trigger: AACTGTGAAGAGAAGGACTATACCATATGGCTGGCACACTCCACAGACCCTGAAGATTATGAAGATGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS GCA 72 bp TGCGTAGCCGCAGAAACTGTTCTTTGTAGCCCAAAATaGAGCCATCTTCATAATCTTCAGGGTCTGTGGAGT +
Preference number: 6 (lower is better)
Translates to: CVAAETVLCSPK*SHLHNLQGLWS
Trigger: ACTCCACAGACCCTGAAGATTATGAAGATGGCTGCATTTTGGGCTACAAAGAACAGTTTCTGCGGCTACGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS GCA 72 bp CAACATAGTCTCGACCATTCTGACACACGGATGACTTaGGTAGCCGCAGAAACTGTTCTTTGTAGCCCAAAA +
Preference number: 6 (lower is better)
Translates to: QHSLDHSDTRMT*VAAETVLCSPK
Trigger: TTTTGGGCTACAAAGAACAGTTTCTGCGGCTACGCAAGTCATCCGTGTGTCAGAATGGTCGAGACTATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS CAA 72 bp AGTGAAATAGATGGGGTCCCTGGTGAACGTGTAGGTTaGCCAGCATTGACCTTCGTCTGTGGAGAACTTAAT +
Preference number: 6 (lower is better)
Translates to: SEIDGVPGERVG*PALTFVCGELN
Trigger: ATTAAGTTCTCCACAGACGAAGGTCAATGCTGGCAAACCTACACGTTCACCAGGGACCCCATCTATTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS CCA 72 bp CATAATCTTCAGGGTCTGTGGAGTGTGCCAGCCATATaGTATAGTCCTTCTCTTCACAGTTCCTTTCAAGGA +
Preference number: 6 (lower is better)
Translates to: HNLQGLWSVPAI*YSPSLHSSFQG
Trigger: TCCTTGAAAGGAACTGTGAAGAGAAGGACTATACCATATGGCTGGCACACTCCACAGACCCTGAAGATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS TCA 72 bp TTCACCTTCCTGGGGCCTAACAGCGTTACTGGGTCCTaGTTATTTATACAGACGAAAAACGATGTTCAAGAG +
Preference number: 6 (lower is better)
Translates to: FTFLGPNSVTGS*LFIQTKNDVQE
Trigger: CTCTTGAACATCGTTTTTCGTCTGTATAAATAATCAGGACCCAGTAACGCTGTTAGGCCCCAGGAAGGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471996.1
CDS GCA 72 bp ATTGTGCCAAACCCAGTGTCTCCAGGTTCATCTACATaGATGAATACCATGTCATCATTTGCTGCCAGAATA +
Preference number: 6 (lower is better)
Translates to: IVPNPVSPGSST*MNTMSSFAARI
Trigger: TATTCTGGCAGCAAATGATGACATGGTATTCATGCATGTAGATGAACCTGGAGACACTGGGTTTGGCACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS CCA 72 bp TTGGACTGTCCAAAAGTCATAATTACCAGTGGTACATaGAAGGTAGTCAAGACTAGAATGACCCCAGTGCTA +
Preference number: 6 (lower is better)
Translates to: LDCPKVIITSGT*KVVKTRMTPVL
Trigger: TAGCACTGGGGTCATTCTAGTCTTGACTACCTTCCATGTACCACTGGTAATTATGACTTTTGGACAGTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256637.8
ENST00000482236.5
ENST00000483508.5
ENST00000493736.5
ENST00000538502.5
ENST00000633956.1
CDS CCA 72 bp ATCAAACACATGCTAATTGTTAACACTGCATTCCCTTaGAGCCATCTGTCATACCTGGCTAGCTTTCTACTC +
Preference number: 6 (lower is better)
Translates to: IKHMLIVNTAFP*SHLSYLASFLL
Trigger: GAGTAGAAAGCTAGCCAGGTATGACAGATGGCTCCAAGGGAATGCAGTGTTAACAATTAGCATGTGTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633956.1
CDS GCA 72 bp TTCATCTACATGCATGAATACCATGTCATCATTTGCTaGCAGAATAGAATAGAACTGTTCCTGTCCCACGGA +
Preference number: 6 (lower is better)
Translates to: FIYMHEYHVIIC*QNRIELFLSHG
Trigger: TCCGTGGGACAGGAACAGTTCTATTCTATTCTGGCAGCAAATGATGACATGGTATTCATGCATGTAGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256637.8
ENST00000538502.5
CDS TCA 72 bp CAATGTTACTTAGTGAAATGCTCCAACGCGTGTTATTaGTCTCACCTTCGATATAGCTTGGACTGTCCAAAA +
Preference number: 6 (lower is better)
Translates to: QCYLVKCSNACY*SHLRYSLDCPK
Trigger: TTTTGGACAGTCCAAGCTATATCGAAGGTGAGATCAATAACACGCGTTGGAGCATTTCACTAAGTAACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483508.5
CDS TCA 72 bp GATAATCAGAATTCTGAGGGCTATACATCATCTGAGTaGGAGGATGAAAAGGGAGATCTGTTTGCACAAAAT +
Preference number: 6 (lower is better)
Translates to: DNQNSEGYTSSE*EDEKGDLFAQN
Trigger: ATTTTGTGCAAACAGATCTCCCTTTTCATCCTCTCACTCAGATGATGTATAGCCCTCAGAATTCTGATTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256637.8
ENST00000493736.5
ENST00000538502.5