RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SORCS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000184985

Ensembl transcript IDs: ENST00000329016.10, ENST00000505529.1, ENST00000507866.6, ENST00000511199.1

Found 684 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTaGACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTC +
Preference number: 1 (lower is better)
Translates to: GRPRPLRGRSPQRSV*TGLQLLQPEVLGGL
Trigger: GAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR GCA 90 bp GGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTaGAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACC +
Preference number: 1 (lower is better)
Translates to: GLCGEGARNAVSERV*SSCSPRYWEGSRTT
Trigger: GGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR GCA 90 bp GGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTaGAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGC +
Preference number: 1 (lower is better)
Translates to: GEGARNAVSERVCSS*SPRYWEGSRTTSLS
Trigger: GCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR GCA 90 bp GGAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTaGACTGTGCTCGCCATGTCTGTCCCTGTGTGCCTGACGCTTGCA +
Preference number: 1 (lower is better)
Translates to: GGQFPGFHVARGPRA*TVLAMSVPVCLTLA
Trigger: TGCAAGCGTCAGGCACACAGGGACAGACATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR GCA 90 bp AGGCACTGTGAGCTAAGGGGGAGGGCAGTTCCCAGGGTTCCATGTTaGCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATGTCTGTCCC +
Preference number: 1 (lower is better)
Translates to: RHCELRGRAVPRVPC*PWAPGLHCARHVCP
Trigger: GGGACAGACATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTCCCCCTTAGCTCACAGTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR CCA 90 bp GCGGGATGGTGCTGCTTGCTGGTAGGAGTGAGGAACCATGGGCACTaGGTCCTGAGCCCGCCCTACCCCGTCTGCCCTGGGGAGAACCAG +
Preference number: 1 (lower is better)
Translates to: AGWCCLLVGVRNHGH*VLSPPYPVCPGENQ
Trigger: CTGGTTCTCCCCAGGGCAGACGGGGTAGGGCGGGCTCAGGACCCAGTGCCCATGGTTCCTCACTCCTACCAGCAAGCAGCACCATCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR GCA 90 bp GCACAGGTGGGAGTGAAGAAGCAAAGTCAGGGAGGCCCCGGCCTCTaGGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGC +
Preference number: 1 (lower is better)
Translates to: AQVGVKKQSQGGPGL*GEGARNAVSERVCS
Trigger: GCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCCCTGACTTTGCTTCTTCACTCCCACCTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR TCA 90 bp GCACAGCACTGGCGCGCAGAGGGCTGGGTTCGGCCACCTCTGCTGTaGCCGTGCTGTGACCTTCAGTTACTCTCCTCCCTGGGCCTCAGT +
Preference number: 1 (lower is better)
Translates to: AQHWRAEGWVRPPLL*PCCDLQLLSSLGLS
Trigger: ACTGAGGCCCAGGGAGGAGAGTAACTGAAGGTCACAGCACGGTCACAGCAGAGGTGGCCGAACCCAGCCCTCTGCGCGCCAGTGCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR CCA 90 bp CCACCTTTCTGGGGGCATCTGGCTCCTTCCAGAGCCCAGACCCGGTaGGAGAACAGCCATCAGGTGGGAGAAGCCTGCGGGATGGTGCTG +
Preference number: 1 (lower is better)
Translates to: PPFWGHLAPSRAQTR*ENSHQVGEACGMVL
Trigger: CAGCACCATCCCGCAGGCTTCTCCCACCTGATGGCTGTTCTCCCACCGGGTCTGGGCTCTGGAAGGAGCCAGATGCCCCCAGAAAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR CCA 90 bp AACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTaGGAGGGCTCCAGGACGACCAGCCTCAGCCCAGAGAAGTCAGGC +
Preference number: 1 (lower is better)
Translates to: NAVSERVCSSCSPRY*EGSRTTSLSPEKSG
Trigger: GCCTGACTTCTCTGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR CCA 90 bp GAGAACCAGGGAGAGCTGCTGCCCCTCTGGGCAGAGGAGACACCCTaGGCACTCAGGGAAAGGGGCTCCCGAGTACGGAACTCTGACAGA +
Preference number: 1 (lower is better)
Translates to: ENQGELLPLWAEETP*ALRERGSRVRNSDR
Trigger: TCTGTCAGAGTTCCGTACTCGGGAGCCCCTTTCCCTGAGTGCCCAGGGTGTCTCCTCTGCCCAGAGGGGCAGCAGCTCTCCCTGGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR CCA 90 bp TGGCTCCTTCCAGAGCCCAGACCCGGTGGGAGAACAGCCATCAGGTaGGAGAAGCCTGCGGGATGGTGCTGCTTGCTGGTAGGAGTGAGG +
Preference number: 1 (lower is better)
Translates to: WLLPEPRPGGRTAIR*EKPAGWCCLLVGVR
Trigger: CCTCACTCCTACCAGCAAGCAGCACCATCCCGCAGGCTTCTCCCACCTGATGGCTGTTCTCCCACCGGGTCTGGGCTCTGGAAGGAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR CCA 90 bp GGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTaGCTCCTTCCAGAGCCCAGACCCGGTGGGAGAACAGCCATCAGG +
Preference number: 1 (lower is better)
Translates to: GTSGAVSTTHLSGGI*LLPEPRPGGRTAIR
Trigger: CCTGATGGCTGTTCTCCCACCGGGTCTGGGCTCTGGAAGGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR TCA 90 bp TGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTGTaGGCTAAGGGGGAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTG +
Preference number: 1 (lower is better)
Translates to: WSRKANDLEWLPQAL*AKGEGSSQGSMLPV
Trigger: CACGGGCAACATGGAACCCTGGGAACTGCCCTCCCCCTTAGCTCACAGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR CCA 90 bp GCAGAAAACTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTaGGGGCATCTGGCTCCTTCCAGAGCCCAGACCCGGTGGGAGAAC +
Preference number: 1 (lower is better)
Translates to: AENWYIWCRLHHPPF*GHLAPSRAQTRWEN
Trigger: GTTCTCCCACCGGGTCTGGGCTCTGGAAGGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAGTTTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR GCA 90 bp GATGGCCTCGTTCCCAGGCGCCCAGGTCTACCTGAACATCAGATATaGAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGC +
Preference number: 1 (lower is better)
Translates to: DGLVPRRPGLPEHQI*RPSNLQPGTDTGPR
Trigger: GCGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGTTCAGGTAGACCTGGGCGCCTGGGAACGAGGCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR GCA 90 bp GATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATaGCACCTCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTT +
Preference number: 1 (lower is better)
Translates to: DLHGCTDGNVSGCLR*HLLPRCLGPHAQHV
Trigger: AACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR GCA 90 bp GACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCCAGGTaGTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTAAC +
Preference number: 1 (lower is better)
Translates to: DGNVSGCLRCHLLPR*LGPHAQHVLNRNIN
Trigger: GTTAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR CCA 90 bp AAAAGGAAAAATAAGAAGGAATGCATTGTCTCTTTGTTATGTGCATaGCAGCTGATGGCCTCGTTCCCAGGCGCCCAGGTCTACCTGAAC +
Preference number: 1 (lower is better)
Translates to: KRKNKKECIVSLLCA*QLMASFPGAQVYLN
Trigger: GTTCAGGTAGACCTGGGCGCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTCCTTCTTATTTTTCCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR TCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCAGTCAGGCCTCGGGCTaGGCGACAGCACGTGGGGCG +
Preference number: 2 (lower is better)
Translates to: GGPGLCGEGARNAVSERVSQASG*ATARGA
Trigger: CGCCCCACGTGCTGTCGCTCAGCCCGAGGCCTGACT...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR CCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCCCGAGGTACTaGGAGGGCTCCAGGACGACC +
Preference number: 2 (lower is better)
Translates to: GGPGLCGEGARNAVSERVCSPRY*EGSRTT
Trigger: GGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCA...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR GCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTATCAGAGGGGGTGGTaGCTGTCGCCTGGTGTGGCG +
Preference number: 2 (lower is better)
Translates to: GGPGLCGEGARNAVSERVYQRGW*LSPGVA
Trigger: CGCCACACCAGGCGACAGGCACCACCCCCTCTGATA...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR CCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCCGCCGGCTTTGCTGGTaGTTCTGTGCCCTCCGTGGG +
Preference number: 2 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCRRLCW*FCALRG
Trigger: CCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCG...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATGGCCAGGGACAGGTGTaGGTGGGGTGGCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHGQGQV*VGWPAG
Trigger: TCCTGCTGGCCACCCCACCCACACCTGTCCCTGGCC...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp GTGGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTaGTGGTTCTGTGCCCTCCGT +
Preference number: 2 (lower is better)
Translates to: VATTQGGGFPQVSEGRQSSRRLC*WFCALR
Trigger: ACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCT...GGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR CCA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATGTGGTGCCTGTCGCCTaGTGTGGCGACGACTCAGGG +
Preference number: 2 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHVVPVA*CGDDSG
Trigger: CCCTGAGTCGTCGCCACACCAGGCGACAGGCACCAC...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTGCCTGAGTCAGGCCTaGTGTCCCATAGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCCLSQA*CPIGAG
Trigger: CCCTGCCCCTATGGGACACCAGGCCTGACTCAGGCA...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp CCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTGCCTGAGTCAGGCCTaGTGTCCCATAGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: PGLCGEGARNAVSERVCSCLSQA*CPIGAG
Trigger: CCCTGCCCCTATGGGACACCAGGCCTGACTCAGGCA...GCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR TCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGCTTTCCGCAGGTCTCTaGGGGGCGCCAGTCCAGCCG +
Preference number: 2 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTLSAGL*GAPVQP
Trigger: CGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAG...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR TCA 90 bp CCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGCTTTCCGCAGGTCTCTaGGGGGCGCCAGTCCAGCCG +
Preference number: 2 (lower is better)
Translates to: PATQCLNGSAALAARGTGLSAGL*GAPVQP
Trigger: CGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAG...CCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR TCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCCCGCAACGCAGTGTCTaGACGGGTCTGCAGCTCTTG +
Preference number: 2 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCPQRSV*TGLQLL
Trigger: CAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGG...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR GCA 90 bp CCCCGTGGGCCTGGGCGGGCTTGGATTTATCAGAGGGGGTGGTGCCTGTCGCCTTCCAGCCGCCGGCTTTaGTGGTGGTTCTGTGCCCTC +
Preference number: 2 (lower is better)
Translates to: PRGPGRAWIYQRGWCLSPSSRRL*WWFCAL
Trigger: GAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGA...AGGCGACAGGCACCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCACGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR TCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTGTGCCCTCCGTGGGTaGAAAGACAGATGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCCALRG*KDRCWG
Trigger: ACCCCAGCATCTGTCTTTTCACCCACGGAGGGCACA...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR TCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCCTGTCCCTGTGTGCCTaGCGCTTGCAGGCGGCCTGC +
Preference number: 2 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLLSLCA*RLQAAC
Trigger: GCAGGCCGCCTGCAAGCGTCAGGCACACAGGGACAG...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp TCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCACTGAGCGACAGCACGTaGGGCGGCCGTGTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: SAGKEPATQCLNGSAALALSDST*GGRVWG
Trigger: ACCCCACACACGGCCGCCCCACGTGCTGTCGCTCAG...TGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR CCA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATACAGAGCCACCCCGGTaGCTACCGCCGGCTATAAAG +
Preference number: 2 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHTEPPR*LPPAIK
Trigger: CTTTATAGCCGGCGGTAGCCACCGGGGTGGCTCTGT...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp AGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCACACCACCCACCTTTCTaGGGGCATCTGGCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: SSQGSMLPVGPGPALCSPHHPPF*GHLAPS
Trigger: GGAAGGAGCCAGATGCCCCCAGAAAGGTGGGTGGTG...TGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR TCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCCCGAGTACGGAACTCTaGCAGAGCCACCCCGGTGGC +
Preference number: 2 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLPSTEL*QSHPGG
Trigger: GCCACCGGGGTGGCTCTGTCAGAGTTCCGTACTCGG...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR GCA 90 bp AGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCAAAGCCTGCGGGATGGTaGTGCTTGCTGGTAGGAGTG +
Preference number: 2 (lower is better)
Translates to: SSQGSMLPVGPGPALCSPKPAGW*CLLVGV
Trigger: CACTCCTACCAGCAAGCAGCACCATCCCGCAGGCTT...TGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp AACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCCGCCGGCTTTGCTGGTaGTTCTGTGCCCTCCGTGGG +
Preference number: 2 (lower is better)
Translates to: NAVSERVCSSCSPRYWEGRRLCW*FCALRG
Trigger: CCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCG...GCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR CCA 90 bp GCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGGGCCTGGGCGGGCTTaGATTTATCAGAGGGGGTGG +
Preference number: 2 (lower is better)
Translates to: ARNAVSERVCSSCSPRYWGPGRA*IYQRGW
Trigger: CCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCC...CCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR CCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGTGCCTGAGTCAGGCCTaGTGTCCCATAGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTCLSQA*CPIGAG
Trigger: CCCTGCCCCTATGGGACACCAGGCCTGACTCAGGCA...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR TCA 90 bp AGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCCATGTGCCCTCCGTGGGTaGAAAGACAGATGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: SSCSPRYWEGSRTTSLSPCALRG*KDRCWG
Trigger: ACCCCAGCATCTGTCTTTTCACCCACGGAGGGCACA...TGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR CCA 90 bp TGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTGCAAAGGTGTCCTTGCAGACGCCTGTCGCCTGGTGTaGCGACGACTCAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: CGWGGQQDKNPCKGVLADACRLV*RRLREG
Trigger: CCCCTCCCTGAGTCGTCGCCACACCAGGCGACAGGC...GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp CGGAACTCTGACAGAGCCACCCCGGTGGCTACCGCCGGCTATAAAGACAGAGAGGTGGTGCCTGTCGCCTaGTGTGGCGACGACTCAGGG +
Preference number: 2 (lower is better)
Translates to: RNSDRATPVATAGYKDREVVPVA*CGDDSG
Trigger: CCCTGAGTCGTCGCCACACCAGGCGACAGGCACCAC...CTCTCTGTCTTTATAGCCGGCGGTAGCCACCGGGGTGGCTCTGTCAGAGTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp CCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCAGGGTGGTGTGGTGTTaGGAGGGCCTGGCACCCGGG +
Preference number: 2 (lower is better)
Translates to: PWVHRRERIRLSQMPPPSRVVWC*EGLAPG
Trigger: CCCGGGTGCCAGGCCCTCCCAACACCACACCACCCT...GGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp CCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCGGCCAGGGACAGGTGTaGGTGGGGTGGCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: PWVHRRERIRLSQMPPPSGQGQV*VGWPAG
Trigger: TCCTGCTGGCCACCCCACCCACACCTGTCCCTGGCC...GGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR TCA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCAGTCAGGCCTCGGGCTaGGCGACAGCACGTGGGGCG +
Preference number: 2 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGASQASG*ATARGA
Trigger: CGCCCCACGTGCTGTCGCTCAGCCCGAGGCCTGACT...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR TCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCCCGCAACGCAGTGTCTaGACGGGTCTGCAGCTCTTG +
Preference number: 2 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLPQRSV*TGLQLL
Trigger: CAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGG...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR GCA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATCTGCAAAGGTGTCCTTaGAGACTGCAAGCAGGGGAA +
Preference number: 2 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHLQRCP*RLQAGE
Trigger: TTCCCCTGCTTGCAGTCTGCAAGGACACCTTTGCAG...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGGAGTGAGGAACCATaGGCACTGGGTCCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLRSEEP*ALGPEP
Trigger: GGGCTCAGGACCCAGTGCCCATGGTTCCTCACTCCT...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCCACCATCCAGGGCTCTaGCGTTCTCCCGCTCTGAGA +
Preference number: 2 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLHHPGL*RSPALR
Trigger: TCTCAGAGCGGGAGAACGCCAGAGCCCTGGATGGTG...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp AGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCACAAGCTCAGACATGGTaGATGGGAGAACGTCTGCAC +
Preference number: 2 (lower is better)
Translates to: SSQGSMLPVGPGPALCSPQAQTW*MGERLH
Trigger: GTGCAGACGTTCTCCCATCCACCATGTCTGAGCTTG...TGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp AGGCACTGTGAGCTAAGGGGGAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGGACAACTTGTAGGGTaGCCTCTGGAGTGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: RHCELRGRAVPRVPCCPWGQLVG*PLEWGG
Trigger: CCCTCCCCACTCCAGAGGCCACCCTACAAGTTGTCC...CCACGGGCAACATGGAACCCTGGGAACTGCCCTCCCCCTTAGCTCACAGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR TCA 90 bp CTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTGGCTCCCCGCACAGGTGGGAGTaGAGAAGCAAAGTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: LVHLVPSPPPTFLGASGSPHRWE*RSKVRE
Trigger: CTCCCTGACTTTGCTTCTTCACTCCCACCTGTGCGG...GGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR GCA 90 bp GGCAGAGGAGACACCCTGGGCACTCAGGGAAAGGGGCTCCCGAGTACGGAACTCAGGCATTTACAGAGCTaGAGTTTCCAGCCGGAGGGC +
Preference number: 2 (lower is better)
Translates to: GRGDTLGTQGKGLPSTELRHLQS*SFQPEG
Trigger: GCCCTCCGGCTGGAAACTGCAGCTCTGTAAATGCCT...GAGTTCCGTACTCGGGAGCCCCTTTCCCTGAGTGCCCAGGGTGTCTCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGATTTATCAGAGGGGGTaGTGCCTGTCGCCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTIYQRG*CLSPGV
Trigger: CACACCAGGCGACAGGCACCACCCCCTCTGATAAAT...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR CCA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCCTGAGCGACAGCACGTaGGGCGGCCGTGTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGALSDST*GGRVWG
Trigger: ACCCCACACACGGCCGCCCCACGTGCTGTCGCTCAG...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCGAGAAGCCTGCGGGATaGTGCTGCTTGCTGGTAGGA +
Preference number: 2 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLEKPAG*CCLLVG
Trigger: TCCTACCAGCAAGCAGCACCATCCCGCAGGCTTCTC...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR TCA 90 bp CGGAACTCTGACAGAGCCACCCCGGTGGCTACCGCCGGCTATAAAGACAGAGAGTGTGCCCTCCGTGGGTaGAAAGACAGATGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: RNSDRATPVATAGYKDRECALRG*KDRCWG
Trigger: ACCCCAGCATCTGTCTTTTCACCCACGGAGGGCACA...CTCTCTGTCTTTATAGCCGGCGGTAGCCACCGGGGTGGCTCTGTCAGAGTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR TCA 90 bp TCGTTCCCAGGCGCCCAGGTCTACCTGAACATCAGATATGCAGACCCTCGAATTATGGGCACTGGGTCCTaGGCCCGCCCTACCCCGTCT +
Preference number: 2 (lower is better)
Translates to: SFPGAQVYLNIRYADPRIMGTGS*ARPTPS
Trigger: AGACGGGGTAGGGCGGGCTCAGGACCCAGTGCCCAT...AATTCGAGGGTCTGCATATCTGATGTTCAGGTAGACCTGGGCGCCTGGGAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR GCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGTTGCTGGTGGTTCTGTaGCCTCCGTGGGTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTLLVVL*PPWVKR
Trigger: TCTTTTCACCCACGGAGGGCACAGAACCACCAGCAA...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR CCA 90 bp TGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTGCAAAGGTGTCCTTGCAGACACAGAGCCACCCCGGTaGCTACCGCCGGCTATAAAG +
Preference number: 2 (lower is better)
Translates to: CGWGGQQDKNPCKGVLADTEPPR*LPPAIK
Trigger: CTTTATAGCCGGCGGTAGCCACCGGGGTGGCTCTGT...GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR TCA 90 bp TGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTGCAAAGGTGTCCTTGCAGACCCGCACAGGTGGGAGTaGAGAAGCAAAGTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: CGWGGQQDKNPCKGVLADPHRWE*RSKVRE
Trigger: CTCCCTGACTTTGCTTCTTCACTCCCACCTGTGCGG...GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR TCA 90 bp AGCTCAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCCGGCCACCTCTGCTGTaGCCGTGCTGTGACCTTCAG +
Preference number: 2 (lower is better)
Translates to: SSDMVDGRTSALSFGFTPRPPLL*PCCDLQ
Trigger: CTGAAGGTCACAGCACGGTCACAGCAGAGGTGGCCG...GGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTGAGCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR GCA 90 bp CAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAGCCCAGGTGGGAGAAGCCTaGGGGATGGTGCTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: QTWWMGERLHCHSDSPPAQVGEA*GMVLLA
Trigger: AGCAAGCAGCACCATCCCGCAGGCTTCTCCCACCTG...GGCTGGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTGTTCTGTGCCCTCCGTaGGTGAAAAGACAGATGCTG +
Preference number: 2 (lower is better)
Translates to: KEPATQCLNGSAALAARGVLCPP*VKRQML
Trigger: CAGCATCTGTCTTTTCACCCACGGAGGGCACAGAAC...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR CCA 90 bp GAATGCATTGTCTCTTTGTTATGTGCATGGCAGCTGATGGCCTCGTTCCCAGGCCTGAGCGACAGCACGTaGGGCGGCCGTGTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: ECIVSLLCAWQLMASFPGLSDST*GGRVWG
Trigger: ACCCCACACACGGCCGCCCCACGTGCTGTCGCTCAG...GCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp TCGTTCCCAGGCGCCCAGGTCTACCTGAACATCAGATATGCAGACCCTCGAATTGAGCTGCTGCCCCTCTaGGCAGAGGAGACACCCTGG +
Preference number: 2 (lower is better)
Translates to: SFPGAQVYLNIRYADPRIELLPL*AEETPW
Trigger: CCAGGGTGTCTCCTCTGCCCAGAGGGGCAGCAGCTC...AATTCGAGGGTCTGCATATCTGATGTTCAGGTAGACCTGGGCGCCTGGGAACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGGTTCCATGTTGCCCGTaGGCCCCGGGCCTGCACTGT +
Preference number: 2 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTVPCCP*APGLHC
Trigger: ACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAAC...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR TCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGCCCGACCCAGGGAGATaGGGTTCCAGTCTCCATGGG +
Preference number: 2 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTPDPGR*GSSLHG
Trigger: CCCATGGAGACTGGAACCTCATCTCCCTGGGTCGGG...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR GCA 90 bp CGGAACTCTGACAGAGCCACCCCGGTGGCTACCGCCGGCTATAAAGACAGAGAGTTGCTGGTGGTTCTGTaGCCTCCGTGGGTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: RNSDRATPVATAGYKDRELLVVL*PPWVKR
Trigger: TCTTTTCACCCACGGAGGGCACAGAACCACCAGCAA...CTCTCTGTCTTTATAGCCGGCGGTAGCCACCGGGGTGGCTCTGTCAGAGTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR GCA 90 bp GAATGCATTGTCTCTTTGTTATGTGCATGGCAGCTGATGGCCTCGTTCCCAGGCTATCAGAGGGGGTGGTaGCTGTCGCCTGGTGTGGCG +
Preference number: 2 (lower is better)
Translates to: ECIVSLLCAWQLMASFPGYQRGW*LSPGVA
Trigger: CGCCACACCAGGCGACAGGCACCACCCCCTCTGATA...GCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR GCA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTGTGTCTGAACGGGTCTaGAGCTCTTGCAGCCCGAGG +
Preference number: 2 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTVSERV*SSCSPR
Trigger: CCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACAC...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTGGTGGGCAGGTAGGGTaGGGAGAGAGCTTTGGGTCT +
Preference number: 2 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTGGQVG*GESFGS
Trigger: AGACCCAAAGCTCTCTCCCCACCCTACCTGCCCACC...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGGGACAACTTGTAGGGTaGCCTCTGGAGTGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTGQLVG*PLEWGG
Trigger: CCCTCCCCACTCCAGAGGCCACCCTACAAGTTGTCC...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR GCA 90 bp GAATGCATTGTCTCTTTGTTATGTGCATGGCAGCTGATGGCCTCGTTCCCAGGCCAGGTGGGAGAAGCCTaGGGGATGGTGCTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: ECIVSLLCAWQLMASFPGQVGEA*GMVLLA
Trigger: AGCAAGCAGCACCATCCCGCAGGCTTCTCCCACCTG...GCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR GCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGAACTGGTACATCTGGTaGCGTCTCCACCACCCACCT +
Preference number: 2 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTNWYIW*RLHHPP
Trigger: AGGTGGGTGGTGGAGACGGCACCAGATGTACCAGTT...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR GCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTACCCAGGGTTCCATGTTaGCCGTGGGCCCCGGGCCTG +
Preference number: 2 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILPRVPC*PWAPGL
Trigger: CAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGG...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR GCA 90 bp GAATGCATTGTCTCTTTGTTATGTGCATGGCAGCTGATGGCCTCGTTCCCAGGCTCAGGCTGTCTCAGATaGCACCTCCTTCCCAGGTGC +
Preference number: 2 (lower is better)
Translates to: ECIVSLLCAWQLMASFPGSGCLR*HLLPRC
Trigger: GCACCTGGGAAGGAGGTGGCATCTGAGACAGCCTGA...GCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGGTTCTGTGCCCTCCGTaGGTGAAAAGACAGATGCTG +
Preference number: 2 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTVLCPP*VKRQML
Trigger: CAGCATCTGTCTTTTCACCCACGGAGGGCACAGAAC...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp CCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCAGGTTCCAGTCTCCATaGGTGGTTTTACTCAACAAG +
Preference number: 2 (lower is better)
Translates to: PWVHRRERIRLSQMPPPSRFQSP*VVLLNK
Trigger: CTTGTTGAGTAAAACCACCCATGGAGACTGGAACCT...GGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGGGAACTGCAGAAAACTaGTACATCTGGTGCCGTCTC +
Preference number: 2 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTGTAEN*YIWCRL
Trigger: GAGACGGCACCAGATGTACCAGTTTTCTGCAGTTCC...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp GAATGCATTGTCTCTTTGTTATGTGCATGGCAGCTGATGGCCTCGTTCCCAGGCCTCAGACATGGTGGATaGGAGAACGTCTGCACTGTC +
Preference number: 2 (lower is better)
Translates to: ECIVSLLCAWQLMASFPGLRHGG*ENVCTV
Trigger: GACAGTGCAGACGTTCTCCCATCCACCATGTCTGAG...GCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR TCA 90 bp CCCCTATATTCCTATAGACTTACACTAACATCCCTGATTCTAGGAAACCGTAAGCCGAGTACGGAACTCTaGCAGAGCCACCCCGGTGGC +
Preference number: 2 (lower is better)
Translates to: PLYSYRLTLTSLILGNRKPSTEL*QSHPGG
Trigger: GCCACCGGGGTGGCTCTGTCAGAGTTCCGTACTCGG...CTTACGGTTTCCTAGAATCAGGGATGTTAGTGTAAGTCTATAGGAATATAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTAAGAGCCCAGACCCGGTaGGAGAACAGCCATCAGGTG +
Preference number: 2 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILRAQTR*ENSHQV
Trigger: CACCTGATGGCTGTTCTCCCACCGGGTCTGGGCTCT...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR GCA 90 bp CCCCTATATTCCTATAGACTTACACTAACATCCCTGATTCTAGGAAACCGTAAGAACTGGTACATCTGGTaGCGTCTCCACCACCCACCT +
Preference number: 2 (lower is better)
Translates to: PLYSYRLTLTSLILGNRKNWYIW*RLHHPP
Trigger: AGGTGGGTGGTGGAGACGGCACCAGATGTACCAGTT...CTTACGGTTTCCTAGAATCAGGGATGTTAGTGTAAGTCTATAGGAATATAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CCA 90 bp CCCCTATATTCCTATAGACTTACACTAACATCCCTGATTCTAGGAAACCGTAAGATTTATCAGAGGGGGTaGTGCCTGTCGCCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: PLYSYRLTLTSLILGNRKIYQRG*CLSPGV
Trigger: CACACCAGGCGACAGGCACCACCCCCTCTGATAAAT...CTTACGGTTTCCTAGAATCAGGGATGTTAGTGTAAGTCTATAGGAATATAGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR TCA 72 bp GGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTaGGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTG +
Preference number: 3 (lower is better)
Translates to: GDDSGRGLSAGL*GAPVQPPALLV
Trigger: CACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR CAA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGGGCCTGGGCGGGCTaGGATTTATCAGAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: GGPGLCGEGARNAVSERVWAWAG*DLSEGV
Trigger: CACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCA...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR GCA 72 bp GGGCCTGGGCGGGCTTGGATTTATCAGAGGGGGTGGTaGCTGTCGCCTGGTGTGGCGACGACTCAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: GPGRAWIYQRGW*LSPGVATTQGG
Trigger: CCCTCCCTGAGTCGTCGCCACACCAGGCGACAGGCACCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR GCA 72 bp GAGCTAAGGGGGAGGGCAGTTCCCAGGGTTCCATGTTaGCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCAT +
Preference number: 3 (lower is better)
Translates to: ELRGRAVPRVPC*PWAPGLHCARH
Trigger: ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTCCCCCTTAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR CCA 72 bp AGGGGGAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTaGGCCCCGGGCCTGCACTGTGCTCGCCATGTCTGT +
Preference number: 3 (lower is better)
Translates to: RGRAVPRVPCCP*APGLHCARHVC
Trigger: ACAGACATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR TCA 72 bp CGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTaGACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTG +
Preference number: 3 (lower is better)
Translates to: RPLRGRSPQRSV*TGLQLLQPEVL
Trigger: CAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR GCA 72 bp GCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTaGAGCCCGAGGTACTGGGAGGGCTCCAGGACGACC +
Preference number: 3 (lower is better)
Translates to: ARNAVSERVCSS*SPRYWEGSRTT
Trigger: GGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR GCA 72 bp GGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTaGAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCC +
Preference number: 3 (lower is better)
Translates to: GEGARNAVSERV*SSCSPRYWEGS
Trigger: GGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR GCA 72 bp TTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTaGACTGTGCTCGCCATGTCTGTCCCTGTGTGCCTG +
Preference number: 3 (lower is better)
Translates to: FPGFHVARGPRA*TVLAMSVPVCL
Trigger: CAGGCACACAGGGACAGACATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR CCA 72 bp CGTGGGCCTGGGCGGGCTTGGATTTATCAGAGGGGGTaGTGCCTGTCGCCTGGTGTGGCGACGACTCAGGGA +
Preference number: 3 (lower is better)
Translates to: RGPGRAWIYQRG*CLSPGVATTQG
Trigger: TCCCTGAGTCGTCGCCACACCAGGCGACAGGCACCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR CAA 90 bp GGCAGAGGAGACACCCTGGGCACTCAGGGAAAGGGGCTCCCGAGTACGGAACTCGTCCAGCCGCCGGCTTaGCTGGTGGTTCTGTGCCCT +
Preference number: 3 (lower is better)
Translates to: GRGDTLGTQGKGLPSTELVQPPA*LVVLCP
Trigger: AGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGAC...GAGTTCCGTACTCGGGAGCCCCTTTCCCTGAGTGCCCAGGGTGTCTCCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CAA 90 bp CTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGTGGGCCTGGGCGGGCTaGGATTTATCAGAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: LQLLQPEVLGGLQDDQPQWAWAG*DLSEGV
Trigger: CACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCA...CTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR GCA 72 bp GCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTaGCCTCCGTGGGTGAAAAGACAGATGCTGGGGTGG +
Preference number: 3 (lower is better)
Translates to: APVQPPALLVVL*PPWVKRQMLGW
Trigger: CCACCCCAGCATCTGTCTTTTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR CCA 72 bp GGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTaGCTCCTTCCAGAGCCCAGACCCGGTGGGAGAACA +
Preference number: 3 (lower is better)
Translates to: GAVSTTHLSGGI*LLPEPRPGGRT
Trigger: TGTTCTCCCACCGGGTCTGGGCTCTGGAAGGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR TCA 72 bp TGGCGCGCAGAGGGCTGGGTTCGGCCACCTCTGCTGTaGCCGTGCTGTGACCTTCAGTTACTCTCCTCCCTG +
Preference number: 3 (lower is better)
Translates to: WRAEGWVRPPLL*PCCDLQLLSSL
Trigger: CAGGGAGGAGAGTAACTGAAGGTCACAGCACGGTCACAGCAGAGGTGGCCGAACCCAGCCCTCTGCGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR CCA 72 bp GGATTTATCAGAGGGGGTGGTGCCTGTCGCCTGGTGTaGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: GFIRGGGACRLV*RRLREGAFRRS
Trigger: AGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCCACACCAGGCGACAGGCACCACCCCCTCTGATAAATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR CCA 72 bp GGCTTGGATTTATCAGAGGGGGTGGTGCCTGTCGCCTaGTGTGGCGACGACTCAGGGAGGGGGCTTTCCGCA +
Preference number: 3 (lower is better)
Translates to: GLDLSEGVVPVA*CGDDSGRGLSA
Trigger: TGCGGAAAGCCCCCTCCCTGAGTCGTCGCCACACCAGGCGACAGGCACCACCCCCTCTGATAAATCCAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
3UTR-3UTR CAA 90 bp CTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTGGCTCCACGGGTCTGCAGCTCTaGCAGCCCGAGGTACTGGGA +
Preference number: 3 (lower is better)
Translates to: LVHLVPSPPPTFLGASGSTGLQL*QPEVLG
Trigger: TCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGT...GGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR-3UTR CAA 90 bp CCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCTGGGCCTGGGCGGGCTaGGATTTATCAGAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: PWVHRRERIRLSQMPPPSWAWAG*DLSEGV
Trigger: CACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCA...GGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR TCA 72 bp GGGCTGGGTTCGGCCACCTCTGCTGTGACCGTGCTGTaGCCTTCAGTTACTCTCCTCCCTGGGCCTCAGTTT +
Preference number: 3 (lower is better)
Translates to: GLGSATSAVTVL*PSVTLLPGPQF
Trigger: AAACTGAGGCCCAGGGAGGAGAGTAACTGAAGGTCACAGCACGGTCACAGCAGAGGTGGCCGAACCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR TCA 72 bp AAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTGTaGGCTAAGGGGGAGGGCAGTTCCCAGGGTTCCATG +
Preference number: 3 (lower is better)
Translates to: KANDLEWLPQAL*AKGEGSSQGSM
Trigger: CATGGAACCCTGGGAACTGCCCTCCCCCTTAGCTCACAGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR GCA 72 bp GGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATaGCACCTCCTTCCCAGGTGCTTGGGTCCACATGCC +
Preference number: 3 (lower is better)
Translates to: GCTDGNVSGCLR*HLLPRCLGPHA
Trigger: GGCATGTGGACCCAAGCACCTGGGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR GCA 72 bp AGAACAGCCATCAGGTGGGAGAAGCCTGCGGGATGGTaGTGCTTGCTGGTAGGAGTGAGGAACCATGGGCAC +
Preference number: 3 (lower is better)
Translates to: RTAIRWEKPAGW*CLLVGVRNHGH
Trigger: GTGCCCATGGTTCCTCACTCCTACCAGCAAGCAGCACCATCCCGCAGGCTTCTCCCACCTGATGGCTGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR CCA 72 bp GCTCCCGAGTACGGAACTCTGACAGAGCCACCCCGGTaGCTACCGCCGGCTATAAAGACAGAGAGTGAGACA +
Preference number: 3 (lower is better)
Translates to: APEYGTLTEPPR*LPPAIKTESET
Trigger: TGTCTCACTCTCTGTCTTTATAGCCGGCGGTAGCCACCGGGGTGGCTCTGTCAGAGTTCCGTACTCGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR GCA 72 bp AGGTGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTaGAAAGGTGTCCTTGCAGACTGCAAGCAGGGGAAT +
Preference number: 3 (lower is better)
Translates to: RCGWGGQQDKNP*KGVLADCKQGN
Trigger: ATTCCCCTGCTTGCAGTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR GCA 72 bp GTTCCCAGGCGCCCAGGTCTACCTGAACATCAGATATaGAGACCCTCGAATTTACAACCAGGGACAGACACG +
Preference number: 3 (lower is better)
Translates to: VPRRPGLPEHQI*RPSNLQPGTDT
Trigger: CGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGTTCAGGTAGACCTGGGCGCCTGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR CCA 72 bp CCAGGGGAAATGAGGCAATTCCCCCAAGCTCAGACATaGTGGATGGGAGAACGTCTGCACTGTCATTCGGAT +
Preference number: 3 (lower is better)
Translates to: PGEMRQFPQAQT*WMGERLHCHSD
Trigger: ATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTGAGCTTGGGGGAATTGCCTCATTTCCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR CCA 72 bp GGGGAAATGAGGCAATTCCCCCAAGCTCAGACATGGTaGATGGGAGAACGTCTGCACTGTCATTCGGATTCA +
Preference number: 3 (lower is better)
Translates to: GEMRQFPQAQTW*MGERLHCHSDS
Trigger: TGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTGAGCTTGGGGGAATTGCCTCATTTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR GCA 72 bp GTATCAGGCTGTCTCAGATGCCACCTCCTTCCCAGGTaGTTGGGTCCACATGCCCAACATGTTCTTAATAGA +
Preference number: 3 (lower is better)
Translates to: VSGCLRCHLLPR*LGPHAQHVLNR
Trigger: TCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGAGGTGGCATCTGAGACAGCCTGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
3UTR CCA 72 bp AATAAGAAGGAATGCATTGTCTCTTTGTTATGTGCATaGCAGCTGATGGCCTCGTTCCCAGGCGCCCAGGTC +
Preference number: 3 (lower is better)
Translates to: NKKECIVSLLCA*QLMASFPGAQV
Trigger: GACCTGGGCGCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTCCTTCTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTGGAGGCCCCGGCCTCTaGGGGGAAGGAGCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: QGGGFPQVSEGRQSSRRLGGPGL*GEGARN
Trigger: GTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC...AAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR TCA 90 bp CTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCATGGGCACTGGGTCCTaGGCCCGCCCTACCCCGTCT +
Preference number: 4 (lower is better)
Translates to: LREGAFRRSLRGASPAAGMGTGS*ARPTPS
Trigger: AGACGGGGTAGGGCGGGCTCAGGACCCAGTGCCCAT...GCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCGGAGGCCCCGGCCTCTaGGGGGAAGGAGCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRGGPGL*GEGARN
Trigger: GTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR TCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCCCTCGCCTTGAATGCTaGCCTGCAGGCCCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCPRLEC*PAGPGA
Trigger: CGCCCCGGGGCCTGCAGGTCAGCATTCAAGGCGAGG...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCCGGACACGCGGTAGATaGCGGGGCTCTCGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: LREGAFRRSLRGASPAAGRTRGR*RGSRSG
Trigger: ACCGCTACGAGAGCCCCGGCATCTACCGCGTGTCCG...GCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTCCACCGCCGCCCAGCTaGTCAGCACCTGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QGGGFPQVSEGRQSSRRLPPPPS*SAPVPV
Trigger: CACAGGCACAGGTGCTGAGCAGCTGGGCGGCGGTGG...AAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCGTGGTGCCTGTCGCCTaGTGTGGCGACGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: LREGAFRRSLRGASPAAGVVPVA*CGDDSG
Trigger: CCCTGAGTCGTCGCCACACCAGGCGACAGGCACCAC...GCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR TCA 90 bp CAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGGAGAGCAGCCGGGTaGCCACCAGGCCCACGTCTT +
Preference number: 4 (lower is better)
Translates to: QGGGFPQVSEGRQSSRRLWRAAG*PPGPRL
Trigger: AAGACGTGGGCCTGGTGGTCACCCGGCTGCTCTCCA...AAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCGGCGTTCTCCCCCTCTaGGAGGGAGGCCACGGTCAT +
Preference number: 4 (lower is better)
Translates to: GGPGLCGEGARNAVSERVGVLPL*EGGHGH
Trigger: ATGACCGTGGCCTCCCTCTCAGAGGGGGAGAACGCC...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCCCGCCTGCCGTGAGCTaGGCACGTCCTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCPPAVS*ARPAAP
Trigger: TGGTGCTGCAGGACGTGCGCAGCTCACGGCAGGCGG...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GTGGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCACGCTCTCCTCCGCCTaGCGTGAGCTGCGCACGTCC +
Preference number: 4 (lower is better)
Translates to: VATTQGGGFPQVSEGRQSTLSSA*RELRTS
Trigger: GGACGTGCGCAGCTCACGGCAGGCGGAGGAGAGCGT...GGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTCCTCCTCGCCGCACTaGCTGGAGAATGAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QGGGFPQVSEGRQSSRRLSSSPH*LENEGR
Trigger: CCGGCCCTCATTCTCCAGGCAGTGCGGCGAGGAGGA...AAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGCTTGCAGGCGGCCTaGTGGCCAGGGACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRRLQAA*WPGTGV
Trigger: CACACCTGTCCCTGGCCAGCAGGCCGCCTGCAAGCG...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCCGTGGGCCCCGGGCCTaGACTGTGCTCGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCRGPRA*TVLAMS
Trigger: AGACATGGCGAGCACAGTGCAGGCCCGGGGCCCACG...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCGGTACCCAAGGCTGCTaGTGTAGGTCTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LREGAFRRSLRGASPAAGGTQGC*CRSGPG
Trigger: CCCTGGGCCAGACCTACACCAGCAGCCTTGGGTACC...GCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCCCTGAGTGGTTGCCCTaGACAGCGCCCTGGACGTCC +
Preference number: 4 (lower is better)
Translates to: GGGFPQVSEGRQSSRRLCPEWLP*TAPWTS
Trigger: GGACGTCCAGGGCGCTGTCCAGGGCAACCACTCAGG...GCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GTGGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCGCCTGTCGCCTGGTGTaGCGACGACTCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VATTQGGGFPQVSEGRQSACRLV*RRLREG
Trigger: CCCCTCCCTGAGTCGTCGCCACACCAGGCGACAGGC...GGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGCTGAGCGACAGCACGTaGGGCGGCCGTGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GFPQVSEGRQSSRRLCWWLSDST*GGRVWG
Trigger: ACCCCACACACGGCCGCCCCACGTGCTGTCGCTCAG...CCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp GAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGCCAGGGACAGGTGTaGGTGGGGTGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: EGAFRRSLRGASPAAGFAGQGQV*VGWPAG
Trigger: TCCTGCTGGCCACCCCACCCACACCTGTCCCTGGCC...AGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCGTTCCATGTTGCCCGTaGGCCCCGGGCCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: GGPGLCGEGARNAVSERVVPCCP*APGLHC
Trigger: ACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAAC...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CCCCGTGGGCCTGGGCGGGCTTGGATTTATCAGAGGGGGTGGTGCCTGTCGCCTGCCACCGCCTCGCCTTaGATGCTGACCTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PRGPGRAWIYQRGWCLSPATASP*MLTCRP
Trigger: GGGCCTGCAGGTCAGCATTCAAGGCGAGGCGGTGGC...AGGCGACAGGCACCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCACGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTCCGTGTTCTCTGCCCTaGCGGACACGCGGTAGATGC +
Preference number: 4 (lower is better)
Translates to: QGGGFPQVSEGRQSSRRLPCSLP*RTRGRC
Trigger: GCATCTACCGCGTGTCCGTCAGGGCAGAGAACACGG...AAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCCGGCCACCTCTGCTGTaGCCGTGCTGTGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: GGPGLCGEGARNAVSERVRPPLL*PCCDLQ
Trigger: CTGAAGGTCACAGCACGGTCACAGCAGAGGTGGCCG...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTGTCCCTGTGTGCCTaGCGCTTGCAGGCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCALSLCA*RLQAAC
Trigger: GCAGGCCGCCTGCAAGCGTCAGGCACACAGGGACAG...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCCTACCGCAGGCACTGTaGGCTAAGGGGGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GGPGLCGEGARNAVSERVLPQAL*AKGEGS
Trigger: ACTGCCCTCCCCCTTAGCTCACAGTGCCTGCGGTAG...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCCGCCTGCCGTGAGCTaGGCACGTCCTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCAPPAVS*ARPAAP
Trigger: TGGTGCTGCAGGACGTGCGCAGCTCACGGCAGGCGG...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTCGGGTCTGCAGCTCTTaGAGCCCGAGGTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: QGGGFPQVSEGRQSSRRLRVCSS*SPRYWE
Trigger: CTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCG...AAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR GCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCAACAAGGAGCGGGTaGCTCCTCCCCACCGGGCAC +
Preference number: 4 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCSTRSG*LLPTGH
Trigger: GTGCCCGGTGGGGAGGAGGCACCCGCTCCTTGTTGA...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCTGTGTGCCTGACGCTTaGAGGCGGCCTGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRCVPDA*RRPAGQ
Trigger: CTGGCCAGCAGGCCGCCTGCAAGCGTCAGGCACACA...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCCTGATGAGCGAGACCTaGGCCCGCGAAGCCACTCCG +
Preference number: 4 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCLMSET*AREATP
Trigger: CGGAGTGGCTTCGCGGGCGCAGGTCTCGCTCATCAG...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCGTAGCGCACGCCCCGTaGGTCCGACTGGTACAGGTT +
Preference number: 4 (lower is better)
Translates to: GGPGLCGEGARNAVSERVVAHAP*VRLVQV
Trigger: AACCTGTACCAGTCGGACCCACGGGGCGTGCGCTAC...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GTGGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCCAGCGTCTCGTCCCCTaGCTCACTCAGCAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: VATTQGGGFPQVSEGRQSQRLVP*LTQQPV
Trigger: GACGGGCTGCTGAGTGAGCCAGGGGACGAGACGCTG...GGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCGCCTGTCGCCTGGTGTaGCGACGACTCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCAACRLV*RRLREG
Trigger: CCCCTCCCTGAGTCGTCGCCACACCAGGCGACAGGC...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCGGGCCTGGGCGGGCTTaGATTTATCAGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GGGFPQVSEGRQSSRRLCGPGRA*IYQRGW
Trigger: CCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCC...GCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCAGGGTGGTGTGGTGTTaGGAGGGCCTGGCACCCGGG +
Preference number: 4 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCARVVWC*EGLAPG
Trigger: CCCGGGTGCCAGGCCCTCCCAACACCACACCACCCT...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GTGGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCGAGCTGCTGCCCCTCTaGGCAGAGGAGACACCCTGG +
Preference number: 4 (lower is better)
Translates to: VATTQGGGFPQVSEGRQSELLPL*AEETPW
Trigger: CCAGGGTGTCTCCTCTGCCCAGAGGGGCAGCAGCTC...GGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCAGGAACCATGGGCACTaGGTCCTGAGCCCGCCCTAC +
Preference number: 4 (lower is better)
Translates to: GGPGLCGEGARNAVSERVRNHGH*VLSPPY
Trigger: GTAGGGCGGGCTCAGGACCCAGTGCCCATGGTTCCT...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCACCTCCACGCCTGTGTaGCCCAGGGTGCTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: PGLCGEGARNAVSERVCSTSTPV*PRVLPL
Trigger: CAAGGGGAGCACCCTGGGCCACACAGGCGTGGAGGT...GCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCGTTCCATGTTGCCCGTaGGCCCCGGGCCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCVPCCP*APGLHC
Trigger: ACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAAC...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAAAAGAGCAGGAGGGCGCTaGGGAGCGCGAGCGAGAGCG +
Preference number: 4 (lower is better)
Translates to: APVQPPALLVVLCPPWVKRAGGR*GARARA
Trigger: CGCTCTCGCTCGCGCTCCCCAGCGCCCTCCTGCTCT...TTTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507866.6
CDS-3UTR TCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCACCGCCACGAACACCTaGCTCTCGTCCGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: GGPGLCGEGARNAVSERVTATNT*LSSVLM
Trigger: CATCAGCACGGACGAGAGTCAGGTGTTCGTGGCGGT...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGGGCCAAAGACCGTCATaGCCAGCGTCTCGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GFPQVSEGRQSSRRLCWWGQRPS*PASRPL
Trigger: CAGGGGACGAGACGCTGGTCATGACGGTCTTTGGCC...CCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCCTGCGAAGAGCCCGATaGCAAACAGCACCACTACCG +
Preference number: 4 (lower is better)
Translates to: LREGAFRRSLRGASPAAGLRRAR*QTAPLP
Trigger: CGGTAGTGGTGCTGTTTGTCATCGGGCTCTTCGCAG...GCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR TCA 90 bp AGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCAGCTCAGGACCACGCCTaGGTGGTTGCCCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: SSQGSMLPVGPGPALCSPAQDHA*VVALDS
Trigger: GCTGTCCAGGGCAACCACTCAGGCGTGGTCCTGAGC...TGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAACCGAGTACGGAACTCTaGCAGAGCCACCCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GASPAAGFAGGSVPSVGEPSTEL*QSHPGG
Trigger: GCCACCGGGGTGGCTCTGTCAGAGTTCCGTACTCGG...TTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCCGAGTACGGAACTCTaGCAGAGCCACCCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCAPSTEL*QSHPGG
Trigger: GCCACCGGGGTGGCTCTGTCAGAGTTCCGTACTCGG...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTCCCGACCCAGGGAGATaGGGTTCCAGTCTCCATGGG +
Preference number: 4 (lower is better)
Translates to: EGAFRRSLRGASPAAGFAPDPGR*GSSLHG
Trigger: CCCATGGAGACTGGAACCTCATCTCCCTGGGTCGGG...AGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTATCAGAGGGGGTGGTaGCTGTCGCCTGGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: GFPQVSEGRQSSRRLCWWYQRGW*LSPGVA
Trigger: CGCCACACCAGGCGACAGGCACCACCCCCTCTGATA...CCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR GCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCACCAGGGAGAGCTGCTaGCCCTCTGGGCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCTRESC*PSGQRR
Trigger: TCTCCTCTGCCCAGAGGGGCAGCAGCTCTCCCTGGT...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAACCCGGGCCTGCACTGTaGTCGCCATGTCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GASPAAGFAGGSVPSVGEPGPAL*SPCLSL
Trigger: CAGGGACAGACATGGCGAGCACAGTGCAGGCCCGGG...TTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGCCCAGGGTTCCATGTTaGCCGTGGGCCCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTPRVPC*PWAPGL
Trigger: CAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGG...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACCCCAGGGTTCCATGTTaGCCGTGGGCCCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GARNAVSERVCSSCSPRYPRVPC*PWAPGL
Trigger: CAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGG...GTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCCTCGCCGCACTGCCTaGAGAATGAGGGCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRPRRTA*RMRAGS
Trigger: ACTTCCGGCCCTCATTCTCCAGGCAGTGCGGCGAGG...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCAGCACCGCCTCATCGTaGCCTGCCGTGTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRSTASS*PAVFSA
Trigger: GGCAGAGAACACGGCAGGCCACGATGAGGCGGTGCT...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCGCACACGGAGGACCCTaGAGTCCTGCAGCACCGAGT +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRAHGGP*SPAAPS
Trigger: ACTCGGTGCTGCAGGACTCCAGGGTCCTCCGTGTGC...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GTGGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCTGCCTGAGTCAGGCCTaGTGTCCCATAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VATTQGGGFPQVSEGRQSCLSQA*CPIGAG
Trigger: CCCTGCCCCTATGGGACACCAGGCCTGACTCAGGCA...GGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCAGGAACCATGGGCACTaGGTCCTGAGCCCGCCCTAC +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRRNHGH*VLSPPY
Trigger: GTAGGGCGGGCTCAGGACCCAGTGCCCATGGTTCCT...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATGGCCAAAGACCGTCATaGCCAGCGTCTCGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHGQRPS*PASRPL
Trigger: CAGGGGACGAGACGCTGGTCATGACGGTCTTTGGCC...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCGTTGGTGCTGGACTCTaGGGAGGAGGAGCGCTCAAA +
Preference number: 4 (lower is better)
Translates to: GGPGLCGEGARNAVSERVVGAGL*GGGALK
Trigger: TTTGAGCGCTCCTCCTCCTCAGAGTCCAGCACCAAC...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCCACTGCAGCTGCACCTaGCTCTGCTGCATGTCCACC +
Preference number: 4 (lower is better)
Translates to: PGLCGEGARNAVSERVCSHCSCT*LCCMST
Trigger: GGTGGACATGCAGCAGAGTCAGGTGCAGCTGCAGTG...GCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTGCTCAGGACCACGCCTaGGTGGTTGCCCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: GLCGEGARNAVSERVCSSAQDHA*VVALDS
Trigger: GCTGTCCAGGGCAACCACTCAGGCGTGGTCCTGAGC...AGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACCTTTCCGCAGGTCTCTaGGGGGCGCCAGTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GARNAVSERVCSSCSPRYLSAGL*GAPVQP
Trigger: CGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAG...GTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR TCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTAGTCAGGCCTCGGGCTaGGCGACAGCACGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGSQASG*ATARGA
Trigger: CGCCCCACGTGCTGTCGCTCAGCCCGAGGCCTGACT...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR TCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCCCGCACAGGTGGGAGTaGAGAAGCAAAGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GGPGLCGEGARNAVSERVPHRWE*RSKVRE
Trigger: CTCCCTGACTTTGCTTCTTCACTCCCACCTGTGCGG...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTACGTAGGGGTTGTCTaGCCAGCGCAGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GFPQVSEGRQSSRRLCWWYVGVV*PAQVQV
Trigger: CACCTGCACCTGCGCTGGGCAGACAACCCCTACGTA...CCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCATACAGCGGTCGCCCTaGAGGTTGGAGAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRIQRSP*RLESSQ
Trigger: CTGGGAGCTCTCCAACCTGCAGGGCGACCGCTGTAT...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CCCCGTGGGCCTGGGCGGGCTTGGATTTATCAGAGGGGGTGGTGCCTGTCGCCTAGAACCAGGGAGAGCTaGTGCCCCTCTGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PRGPGRAWIYQRGWCLSPRTRES*CPSGQR
Trigger: CCTCTGCCCAGAGGGGCAGCAGCTCTCCCTGGTTCT...AGGCGACAGGCACCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCACGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCCAGGTGGGAGAAGCCTaGGGGATGGTGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: PGLCGEGARNAVSERVCSQVGEA*GMVLLA
Trigger: AGCAAGCAGCACCATCCCGCAGGCTTCTCCCACCTG...GCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGCGTGGGCCCCGGGCCTaGACTGTGCTCGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: ARNAVSERVCSSCSPRYWRGPRA*TVLAMS
Trigger: AGACATGGCGAGCACAGTGCAGGCCCGGGGCCCACG...CCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTCTGGGGCGGTGTCCTTaGTGTGCACGGTGCCTGATA +
Preference number: 4 (lower is better)
Translates to: EGAFRRSLRGASPAAGFALGRCP*CARCLI
Trigger: TATCAGGCACCGTGCACACCAAGGACACCGCCCCAG...AGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCACCTCGCCGCACTGCCTaGAGAATGAGGGCCGGAAGT +
Preference number: 4 (lower is better)
Translates to: SSQGSMLPVGPGPALCSPPRRTA*RMRAGS
Trigger: ACTTCCGGCCCTCATTCTCCAGGCAGTGCGGCGAGG...TGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATAGCACCGCCTCATCGTaGCCTGCCGTGTTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHSTASS*PAVFSA
Trigger: GGCAGAGAACACGGCAGGCCACGATGAGGCGGTGCT...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCCACGCCGGCTTTGCTGGTaGTTCTGTGCCCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: SSCSPRYWEGSRTTSLSPRRLCW*FCALRG
Trigger: CCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCG...TGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp CTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGGTGGTGCCTGTCGCCTaGTGTGGCGACGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: LQLLQPEVLGGLQDDQPQVVPVA*CGDDSG
Trigger: CCCTGAGTCGTCGCCACACCAGGCGACAGGCACCAC...CTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTGTGGTGCCTGTCGCCTaGTGTGGCGACGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: GLCGEGARNAVSERVCSSVVPVA*CGDDSG
Trigger: CCCTGAGTCGTCGCCACACCAGGCGACAGGCACCAC...AGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCCGTGGGCCTGGGCGGGCTTGGATTTATCAGAGGGGGTGGTGCCTGTCGCCTTGCCTGAGTCAGGCCTaGTGTCCCATAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PRGPGRAWIYQRGWCLSPCLSQA*CPIGAG
Trigger: CCCTGCCCCTATGGGACACCAGGCCTGACTCAGGCA...AGGCGACAGGCACCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCACGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp GCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGGTGTTGGGAGGGCCTaGCACCCGGGCTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: ARNAVSERVCSSCSPRYWGVGRA*HPGSHR
Trigger: TCTGTGGGAGCCCGGGTGCCAGGCCCTCCCAACACC...CCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATGCAGAGGAGACACCCTaGGCACTCAGGGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHAEETP*ALRERG
Trigger: GCCCCTTTCCCTGAGTGCCCAGGGTGTCTCCTCTGC...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCCACCTCCAGGATGTCGATaGGCACGCTCTCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: SSCSPRYWEGSRTTSLSPPPGCR*ARSPPP
Trigger: AGGCGGAGGAGAGCGTGCTCATCGACATCCTGGAGG...TGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CCCCGTGGGCCTGGGCGGGCTTGGATTTATCAGAGGGGGTGGTGCCTGTCGCCTACCTGCCGCCAGGTGTaGCCACAGTCTGACGTGATG +
Preference number: 4 (lower is better)
Translates to: PRGPGRAWIYQRGWCLSPTCRQV*PQSDVM
Trigger: CATCACGTCAGACTGTGGTCACACCTGGCGGCAGGT...AGGCGACAGGCACCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCACGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTAATCGGAGCGGAAGCTaGTGTGGCCAAAGACCGTCA +
Preference number: 4 (lower is better)
Translates to: QGGGFPQVSEGRQSSRRLNRSGS*CGQRPS
Trigger: TGACGGTCTTTGGCCACATCAGCTTCCGCTCCGATT...AAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CCCCGTGGGCCTGGGCGGGCTTGGATTTATCAGAGGGGGTGGTGCCTGTCGCCTTTCTCTGCTGGCCCATaGTACAGCGGTCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PRGPGRAWIYQRGWCLSPFSAGP*YSGRPA
Trigger: TGCAGGGCGACCGCTGTATCATGGGCCAGCAGAGAA...AGGCGACAGGCACCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCACGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCGCCACCGCCTCGCCTTaGATGCTGACCTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLATASP*MLTCRP
Trigger: GGGCCTGCAGGTCAGCATTCAAGGCGAGGCGGTGGC...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCAGTCACCAGAAGCTCCTaGGGGACGCTGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSQGSMLPVGPGPALCSPVTRSS*GTLVSL
Trigger: CAAGGAGACCAGCGTCCCTCAGGAGCTTCTGGTGAC...TGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCCCGCACAGGTGGGAGTaGAGAAGCAAAGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PGLCGEGARNAVSERVCSPHRWE*RSKVRE
Trigger: CTCCCTGACTTTGCTTCTTCACTCCCACCTGTGCGG...GCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCCTGTCCCTGTGTGCCTaGCGCTTGCAGGCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NAVSERVCSSCSPRYWEGLSLCA*RLQAAC
Trigger: GCAGGCCGCCTGCAAGCGTCAGGCACACAGGGACAG...GCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCTCCGGTACCCAAGGCTaGTGGTGTAGGTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCASGTQG*WCRSGP
Trigger: TGGGCCAGACCTACACCAGCAGCCTTGGGTACCGGA...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCGTCAGGACATCACCCTaGTCCTGCCGCACCACAAAC +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRVRTSP*SCRTTN
Trigger: GTTTGTGGTGCGGCAGGAGCAGGGTGATGTCCTGAC...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGTTCCCACAGGCGGCCTaGACCGTCACACGCACGTCG +
Preference number: 4 (lower is better)
Translates to: PATQCLNGSAALAARGTGFPQAA*TVTRTS
Trigger: CGACGTGCGTGTGACGGTGCAGGCCGCCTGTGGGAA...CCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCCCACCGCCGCCCAGCTaGTCAGCACCTGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLPPPPS*SAPVPV
Trigger: CACAGGCACAGGTGCTGAGCAGCTGGGCGGCGGTGG...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTGATGAAGGCTCCCGCTaGGAAGAGCCCGATGACAAA +
Preference number: 4 (lower is better)
Translates to: QGGGFPQVSEGRQSSRRLDEGSR*EEPDDK
Trigger: TTTGTCATCGGGCTCTTCGCAGCGGGAGCCTTCATC...AAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR GCA 90 bp GCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAAACGGGTCTGCAGCTCTTaGAGCCCGAGGTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: APVQPPALLVVLCPPWVKRVCSS*SPRYWE
Trigger: CTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCG...TTTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR GCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTCCGCCCTACCCCGTCTaGCCTGGGGAGAACCAGGGA +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGPPYPV*PGENQG
Trigger: TCCCTGGTTCTCCCCAGGGCAGACGGGGTAGGGCGG...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp AGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCACCTGCGGGATGGTGCTaGTTGCTGGTAGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SSQGSMLPVGPGPALCSPPAGWC*LLVGVR
Trigger: CCTCACTCCTACCAGCAAGCAGCACCATCCCGCAGG...TGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCAAGCCTGCGGGATGGTaGTGCTTGCTGGTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCKPAGW*CLLVGV
Trigger: CACTCCTACCAGCAAGCAGCACCATCCCGCAGGCTT...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp AACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCCGCTTGCAGGCGGCCTaGTGGCCAGGGACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: NAVSERVCSSCSPRYWEGRLQAA*WPGTGV
Trigger: CACACCTGTCCCTGGCCAGCAGGCCGCCTGCAAGCG...GCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGCCCGGGCCTGCACTGTaGTCGCCATGTCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTPGPAL*SPCLSL
Trigger: CAGGGACAGACATGGCGAGCACAGTGCAGGCCCGGG...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAAAACCATCGCCTGGTTGTaGGTCGCGTCCCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: APVQPPALLVVLCPPWVKTIAWL*VASPLS
Trigger: GCTCAAGGGGGACGCGACGCACAACCAGGCGATGGT...TTTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507866.6
CDS-3UTR CCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCACGGTCAGAGACCCGTaGTCAATGGGGCCTGCGAAT +
Preference number: 4 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCTVRDP*SMGPAN
Trigger: ATTCGCAGGCCCCATTGACCACGGGTCTCTGACCGT...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGTGCAGGTGGCAGTCTaGAGGCTTGCAGTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: EGAFRRSLRGASPAAGFAVQVAV*RLAVGW
Trigger: CCAACCAACTGCAAGCCTCCAGACTGCCACCTGCAC...AGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCCGTGGGCCTGGGCGGGCTTGGATTTATCAGAGGGGGTGGTGCCTGTCGCCTAGGTGCAGGTGCAGGTaGCAGTCTGGAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PRGPGRAWIYQRGWCLSPRCRCR*QSGGLQ
Trigger: CTGCAAGCCTCCAGACTGCCACCTGCACCTGCACCT...AGGCGACAGGCACCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCACGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACCAGCGTCTCGTCCCCTaGCTCACTCAGCAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: GARNAVSERVCSSCSPRYQRLVP*LTQQPV
Trigger: GACGGGCTGCTGAGTGAGCCAGGGGACGAGACGCTG...GTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCCGGAAACTTCTCTGCTaGCCCATGATACAGCGGTCG +
Preference number: 4 (lower is better)
Translates to: GGPGLCGEGARNAVSERVRKLLC*PMIQRS
Trigger: CGACCGCTGTATCATGGGCCAGCAGAGAAGTTTCCG...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTGCTCCTGAGGGACGCTaGTCTCCTTGGAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GLCGEGARNAVSERVCSSAPEGR*SPWRAA
Trigger: GGCTGCTCTCCAAGGAGACCAGCGTCCCTCAGGAGC...AGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCCGTGGGCCTGGGCGGGCTTGGATTTATCAGAGGGGGTGGTGCCTGTCGCCTACAGATCGGCCAAAGTaGGCAGCCCCGGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: PRGPGRAWIYQRGWCLSPTDRPK*AAPASP
Trigger: TGGTGAAGCCGGGGCTGCCCACTTTGGCCGATCTGT...AGGCGACAGGCACCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCACGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCGCGTTCAGCACCTGCTaGATGGCGGCGAGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCAAFSTC*MAASLL
Trigger: TAAGAGGCTCGCCGCCATCCAGCAGGTGCTGAACGC...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTAGCCGCCGGCTTTGCTaGTGGTTCTGTGCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: GLCGEGARNAVSERVCSSSRRLC*WFCALR
Trigger: ACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCT...AGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp TCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCTGTCGCCTGGTGTaGCGACGACTCAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SAGKEPATQCLNGSAALAACRLV*RRLREG
Trigger: CCCCTCCCTGAGTCGTCGCCACACCAGGCGACAGGC...TGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp CTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGGGGCCTGGGCGGGCTTaGATTTATCAGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LQLLQPEVLGGLQDDQPQGPGRA*IYQRGW
Trigger: CCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCC...CTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTCTGAGCGACAGCACGTaGGGCGGCCGTGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGLSDST*GGRVWG
Trigger: ACCCCACACACGGCCGCCCCACGTGCTGTCGCTCAG...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGTGCAGCCCGAGGTACTaGGAGGGCTCCAGGACGACC +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTCSPRY*EGSRTT
Trigger: GGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCA...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp CTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTGGCTCCGGTGTTGGGAGGGCCTaGCACCCGGGCTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: LVHLVPSPPPTFLGASGSGVGRA*HPGSHR
Trigger: TCTGTGGGAGCCCGGGTGCCAGGCCCTCCCAACACC...GGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCCAGCAGAGGAGACACCCTaGGCACTCAGGGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: SSCSPRYWEGSRTTSLSPAEETP*ALRERG
Trigger: GCCCCTTTCCCTGAGTGCCCAGGGTGTCTCCTCTGC...TGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGGAGAAGCCTGCGGGATaGTGCTGCTTGCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: GFPQVSEGRQSSRRLCWWEKPAG*CCLLVG
Trigger: TCCTACCAGCAAGCAGCACCATCCCGCAGGCTTCTC...CCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCAGAGCCCAGACCCGGTaGGAGAACAGCCATCAGGTG +
Preference number: 4 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCARAQTR*ENSHQV
Trigger: CACCTGATGGCTGTTCTCCCACCGGGTCTGGGCTCT...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCTCCACGCCTGTGTaGCCCAGGGTGCTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTTSTPV*PRVLPL
Trigger: CAAGGGGAGCACCCTGGGCCACACAGGCGTGGAGGT...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCCAGGTCCCAGAGAGTCATaGCCCCACGTCCTGGATCCC +
Preference number: 4 (lower is better)
Translates to: SSCSPRYWEGSRTTSLSPGPRES*PHVLDP
Trigger: GGGATCCAGGACGTGGGGCCATGACTCTCTGGGACC...TGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGACGCCTGGATCTCCATaGGTGCACAGACGGGAACGT +
Preference number: 4 (lower is better)
Translates to: GFPQVSEGRQSSRRLCWWTPGSP*VHRRER
Trigger: ACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGT...CCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGATAAACTCCTCACCCTaGACAGCGCCCTGGACGTCC +
Preference number: 4 (lower is better)
Translates to: GFPQVSEGRQSSRRLCWWINSSP*TAPWTS
Trigger: GGACGTCCAGGGCGCTGTCCAGGGTGAGGAGTTTAT...CCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505529.1
CDS-3UTR TCA 90 bp AGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCAGGAATGGGCTGCTTCTaGAAGGTGGCGCCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: SSQGSMLPVGPGPALCSPGMGCF*KVAPSS
Trigger: AGACGAAGGCGCCACCTTTCAGAAGCAGCCCATTCC...TGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTACACCGAGGTGCTGGTaGAGTTGTGCGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GLCGEGARNAVSERVCSSTPRCW*SCACSR
Trigger: CCTGGAGCACGCACAACTTCACCAGCACCTCGGTGT...AGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp TGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTGCAAAGGTGTCCTTGCAGACCCTCGCCTTGAATGCTaGCCTGCAGGCCCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: CGWGGQQDKNPCKGVLADPRLEC*PAGPGA
Trigger: CGCCCCGGGGCCTGCAGGTCAGCATTCAAGGCGAGG...GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGGTCACCAGAAGCTCCTaGGGGACGCTGGTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LQLLQPEVLGGLQDDQPQVTRSS*GTLVSL
Trigger: CAAGGAGACCAGCGTCCCTCAGGAGCTTCTGGTGAC...CTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAAAGCATCTCTCGGGAGTTaGTGCTCAGGACCACGCCTG +
Preference number: 4 (lower is better)
Translates to: APVQPPALLVVLCPPWVKASLGS*CSGPRL
Trigger: CAGGCGTGGTCCTGAGCATCAACTCCCGAGAGATGC...TTTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR TCA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCTGTGCCCTCCGTGGGTaGAAAGACAGATGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCACALRG*KDRCWG
Trigger: ACCCCAGCATCTGTCTTTTCACCCACGGAGGGCACA...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR TCA 90 bp GAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGCGCCCAGGTCTACCTaGACATCAGATATGCAGACC +
Preference number: 4 (lower is better)
Translates to: EGAFRRSLRGASPAAGFAAPRST*TSDMQT
Trigger: GGTCTGCATATCTGATGTTCAGGTAGACCTGGGCGC...AGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCAACCTTCCCCATGTCTaGGTGGTAGTACTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: LREGAFRRSLRGASPAAGNLPHV*VVVLRQ
Trigger: CTGACGAAGTACTACCACGCAGACATGGGGAAGGTT...GCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCCCTTGGTGTGCACGGTaGCTGATACGTAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PGLCGEGARNAVSERVCSPWCAR*LIRRGC
Trigger: ACAACCCCTACGTATCAGGCACCGTGCACACCAAGG...GCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCCAGAGCACTTGTTGGTaGTGGACTCTGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCQSTCW*WTLRRR
Trigger: CCTCCTCCTCAGAGTCCAGCACCAACAAGTGCTCTG...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTGCTGCTCAGCACCTGTaGCTGTGTCCCGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGAAQHL*LCPAGP
Trigger: TGGCCCTGCGGGACACAGGCACAGGTGCTGAGCAGC...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCGATGAAGGCTCCCGCTaGGAAGAGCCCGATGACAAA +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRDEGSR*EEPDDK
Trigger: TTTGTCATCGGGCTCTTCGCAGCGGGAGCCTTCATC...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCAGAGGAGACACCCTGGGCACTCAGGGAAAGGGGCTCCCGAGTACGGAACTCTCCAGCCGCCGGCTTTaGTGGTGGTTCTGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GRGDTLGTQGKGLPSTELSSRRL*WWFCAL
Trigger: GAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGA...GAGTTCCGTACTCGGGAGCCCCTTTCCCTGAGTGCCCAGGGTGTCTCCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp AGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCCAGTGTCTGAACGGGTCTaGAGCTCTTGCAGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: SSCSPRYWEGSRTTSLSPVSERV*SSCSPR
Trigger: CCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACAC...TGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR GCA 90 bp CAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAGCCGGAGGCCCCGGCCTCTaGGGGGAAGGAGCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: QTWWMGERLHCHSDSPPAGGPGL*GEGARN
Trigger: GTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC...GGCTGGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGGGAGAGCTGCTaGCCCTCTGGGCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTTRESC*PSGQRR
Trigger: TCTCCTCTGCCCAGAGGGGCAGCAGCTCTCCCTGGT...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCCTGGATCTCCATGGGTaGACAGACGGGAACGTATCA +
Preference number: 4 (lower is better)
Translates to: GGPGLCGEGARNAVSERVLDLHG*TDGNVS
Trigger: TGATACGTTCCCGTCTGTGCACCCATGGAGATCCAG...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGTTCTCGCCCGTCCAGTaGACCATCGCCTGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LQLLQPEVLGGLQDDQPQFSPVQ*TIAWLC
Trigger: GCACAACCAGGCGATGGTGCACTGGACGGGCGAGAA...CTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507866.6
CDS-3UTR CCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCTGAGGAATAGGCTCTaGTCCCGGTCACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRLRNRL*SRSLSE
Trigger: CTCACTCAGTGACCGGGACCAGAGCCTATTCCTCAG...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTCTGAGGAATAGGCTCTaGTCCCGGTCACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: EGAFRRSLRGASPAAGFALRNRL*SRSLSE
Trigger: CTCACTCAGTGACCGGGACCAGAGCCTATTCCTCAG...AGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCTCTTGGGCTTCCACGTaGACCAAGTCAGGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCASWAST*TKSGSA
Trigger: CGCTGACCCTGACTTGGTCCACGTGGAAGCCCAAGA...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCCATGTCCATGCTGGGTaGCCTCAGGTAATCCCAGTC +
Preference number: 4 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCHVHAG*PQVIPV
Trigger: GACTGGGATTACCTGAGGCCACCCAGCATGGACATG...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGGGTACCCAAGGCTGCTaGTGTAGGTCTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PATQCLNGSAALAARGTGGTQGC*CRSGPG
Trigger: CCCTGGGCCAGACCTACACCAGCAGCCTTGGGTACC...CCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACGCTCCTGAGGGACGCTaGTCTCCTTGGAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GARNAVSERVCSSCSPRYAPEGR*SPWRAA
Trigger: GGCTGCTCTCCAAGGAGACCAGCGTCCCTCAGGAGC...GTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGACAGATCGGCCAAAGTaGGCAGCCCCGGCTTCACCA +
Preference number: 4 (lower is better)
Translates to: LQLLQPEVLGGLQDDQPQTDRPK*AAPASP
Trigger: TGGTGAAGCCGGGGCTGCCCACTTTGGCCGATCTGT...CTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTTCTCGTTGTGCATTTaGGCGTACACGGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GGPGLCGEGARNAVSERVFSLCI*AYTVLP
Trigger: AGGCAGGACCGTGTACGCCCAAATGCACAACGAGAA...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp AACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCCCTGAGTGGTTGCCCTaGACAGCGCCCTGGACGTCC +
Preference number: 4 (lower is better)
Translates to: NAVSERVCSSCSPRYWEGPEWLP*TAPWTS
Trigger: GGACGTCCAGGGCGCTGTCCAGGGCAACCACTCAGG...GCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTAGGACCACGCCTGAGTaGTTGCCCTGGACAGCGCCC +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGRTTPE*LPWTAP
Trigger: GGGCGCTGTCCAGGGCAACCACTCAGGCGTGGTCCT...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCAGGACCACGCCTGAGTaGTTGCCCTGGACAGCGCCC +
Preference number: 4 (lower is better)
Translates to: NAVSERVCSSCSPRYWEGRTTPE*LPWTAP
Trigger: GGGCGCTGTCCAGGGCAACCACTCAGGCGTGGTCCT...GCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGCCGCCGGCTTTGCTaGTGGTTCTGTGCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: PATQCLNGSAALAARGTGSRRLC*WFCALR
Trigger: ACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCT...CCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp TCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCATGCAGCCCGAGGTACTaGGAGGGCTCCAGGACGACC +
Preference number: 4 (lower is better)
Translates to: SAGKEPATQCLNGSAALACSPRY*EGSRTT
Trigger: GGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCA...TGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGCTACCCCGTCTGCCCTaGGGAGAACCAGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTLPRLP*GEPGRA
Trigger: AGCTCTCCCTGGTTCTCCCCAGGGCAGACGGGGTAG...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATCTTTCTGGGGGCATCTaGCTCCTTCCAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHLSGGI*LLPEPR
Trigger: TCTGGGCTCTGGAAGGAGCCAGATGCCCCCAGAAAG...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGGGTGGGCAGGTAGGGTaGGGAGAGAGCTTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LQLLQPEVLGGLQDDQPQGGQVG*GESFGS
Trigger: AGACCCAAAGCTCTCTCCCCACCCTACCTGCCCACC...CTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGGGTCCCAGAGAGTCATaGCCCCACGTCCTGGATCCC +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTGPRES*PHVLDP
Trigger: GGGATCCAGGACGTGGGGCCATGACTCTCTGGGACC...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTGGGGAATGGGGGCTGTaGCAAGGTCCCAGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: GLCGEGARNAVSERVCSSGEWGL*QGPRES
Trigger: TGACTCTCTGGGACCTTGCCACAGCCCCCATTCCCC...AGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CGGAACTCTGACAGAGCCACCCCGGTGGCTACCGCCGGCTATAAAGACAGAGAGGGCCAGGGACAGGTGTaGGTGGGGTGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RNSDRATPVATAGYKDREGQGQV*VGWPAG
Trigger: TCCTGCTGGCCACCCCACCCACACCTGTCCCTGGCC...CTCTCTGTCTTTATAGCCGGCGGTAGCCACCGGGGTGGCTCTGTCAGAGTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCTTGCAGGCGGCCTGCTaGCCAGGGACAGGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLLQAAC*PGTGVG
Trigger: ACCCACACCTGTCCCTGGCCAGCAGGCCGCCTGCAA...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCCAGTCCCGGTCACTGAGTaGGGAGCTGACAAGGATGAC +
Preference number: 4 (lower is better)
Translates to: SSCSPRYWEGSRTTSLSPVPVTE*GADKDD
Trigger: GTCATCCTTGTCAGCTCCTCACTCAGTGACCGGGAC...TGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAGCCCTCCTCCGCCTGCCGTaGGCTGCGCACGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QTWWMGERLHCHSDSPPALLRLP*AAHVLQ
Trigger: CTGCAGGACGTGCGCAGCTCACGGCAGGCGGAGGAG...GGCTGGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTCCTCCAGGATGTCGATaGGCACGCTCTCCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGPPGCR*ARSPPP
Trigger: AGGCGGAGGAGAGCGTGCTCATCGACATCCTGGAGG...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACACCTGCCGCCAGGTGTaGCCACAGTCTGACGTGATG +
Preference number: 4 (lower is better)
Translates to: GARNAVSERVCSSCSPRYTCRQV*PQSDVM
Trigger: CATCACGTCAGACTGTGGTCACACCTGGCGGCAGGT...GTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGCAGAGGAGACACCCTGGGCACTCAGGGAAAGGGGCTCCCGAGTACGGAACTCGGATGGAGGTGTCTTTaGTGGCCACGATCACGCCGC +
Preference number: 4 (lower is better)
Translates to: GRGDTLGTQGKGLPSTELGWRCL*WPRSRR
Trigger: GCGGCGTGATCGTGGCCATCAAAGACACCTCCATCC...GAGTTCCGTACTCGGGAGCCCCTTTCCCTGAGTGCCCAGGGTGTCTCCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACACACCGAGGTGCTGGTaGAGTTGTGCGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GARNAVSERVCSSCSPRYTPRCW*SCACSR
Trigger: CCTGGAGCACGCACAACTTCACCAGCACCTCGGTGT...GTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTGGCTCCGCCGGAAGTCCACCTTaGCCAGCTCCCAATCGGAGC +
Preference number: 4 (lower is better)
Translates to: LVHLVPSPPPTFLGASGSAGSPP*PAPNRS
Trigger: GCTCCGATTGGGAGCTGGTCAAGGTGGACTTCCGGC...GGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTGCCGGAAGTCCACCTTaGCCAGCTCCCAATCGGAGC +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGAGSPP*PAPNRS
Trigger: GCTCCGATTGGGAGCTGGTCAAGGTGGACTTCCGGC...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGGCACTGCCTGGAGAATaGGGGCCGGAAGTCCACCTT +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTALPGE*GPEVHL
Trigger: AAGGTGGACTTCCGGCCCTCATTCTCCAGGCAGTGC...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCTCACGTACATGGCCTTaGAGCCGTCCCCAAGGTCTA +
Preference number: 4 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCASRTWP*SRPQGL
Trigger: TAGACCTTGGGGACGGCTTCAAGGCCATGTACGTGA...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGTGGACGTCCTCACTGTaGCTCACAGGGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: LQLLQPEVLGGLQDDQPQWTSSL*LTGLVI
Trigger: GATGACCAGCCCTGTGAGTCACAGTGAGGACGTCCA...CTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR TCA 90 bp GCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAAATGTGCCCTCCGTGGGTaGAAAGACAGATGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: APVQPPALLVVLCPPWVKCALRG*KDRCWG
Trigger: ACCCCAGCATCTGTCTTTTCACCCACGGAGGGCACA...TTTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR TCA 90 bp TGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTGCAAAGGTGTCCTTGCAGACCTTTCCGCAGGTCTCTaGGGGGCGCCAGTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: CGWGGQQDKNPCKGVLADLSAGL*GAPVQP
Trigger: CGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAG...GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGCCGCAACGCAGTGTCTaGACGGGTCTGCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTPQRSV*TGLQLL
Trigger: CAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGG...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR TCA 90 bp AGGCACTGTGAGCTAAGGGGGAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGCGGCCACCTCTGCTGTaGCCGTGCTGTGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: RHCELRGRAVPRVPCCPWRPPLL*PCCDLQ
Trigger: CTGAAGGTCACAGCACGGTCACAGCAGAGGTGGCCG...CCACGGGCAACATGGAACCCTGGGAACTGCCCTCCCCCTTAGCTCACAGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGGCACTGTTTGGGGCGTaGAGATTCACCCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LQLLQPEVLGGLQDDQPQALFGA*RFTPGL
Trigger: AAGCCCAGGGGTGAATCTTCACGCCCCAAACAGTGC...CTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATGCGCCCAGGTCTACCTaGACATCAGATATGCAGACC +
Preference number: 4 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHAPRST*TSDMQT
Trigger: GGTCTGCATATCTGATGTTCAGGTAGACCTGGGCGC...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGATACAGCGGTCGCCCTaGAGGTTGGAGAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PATQCLNGSAALAARGTGIQRSP*RLESSQ
Trigger: CTGGGAGCTCTCCAACCTGCAGGGCGACCGCTGTAT...CCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAAAACATCACCCTGCTCCTaGCGCACCACAAACAGGACG +
Preference number: 4 (lower is better)
Translates to: APVQPPALLVVLCPPWVKTSPCS*RTTNRT
Trigger: CGTCCTGTTTGTGGTGCGGCAGGAGCAGGGTGATGT...TTTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CGGAACTCTGACAGAGCCACCCCGGTGGCTACCGCCGGCTATAAAGACAGAGAGCGGACACGCGGTAGATaGCGGGGCTCTCGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: RNSDRATPVATAGYKDRERTRGR*RGSRSG
Trigger: ACCGCTACGAGAGCCCCGGCATCTACCGCGTGTCCG...CTCTCTGTCTTTATAGCCGGCGGTAGCCACCGGGGTGGCTCTGTCAGAGTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTGCCTGCCGTGTTCTCTaGCCTGACGGACACGCGGTA +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGACRVL*PDGHAV
Trigger: TACCGCGTGTCCGTCAGGGCAGAGAACACGGCAGGC...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCCGCCTCATCGTGGCCTaGCGTGTTCTCTGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLRLIVA*RVLCPD
Trigger: GTCAGGGCAGAGAACACGGCAGGCCACGATGAGGCG...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCTGCTCCTTCTCGTTGTaGATTTGGGCGTACACGGTC +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRCSFSL*IWAYTV
Trigger: GACCGTGTACGCCCAAATGCACAACGAGAAGGAGCA...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR GCA 90 bp AACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTATCAGAGGGGGTGGTaGCTGTCGCCTGGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: NAVSERVCSSCSPRYWEGYQRGW*LSPGVA
Trigger: CGCCACACCAGGCGACAGGCACCACCCCCTCTGATA...GCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR GCA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATAGGCATTTACAGAGCTaGAGTTTCCAGCCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHRHLQS*SFQPEG
Trigger: GCCCTCCGGCTGGAAACTGCAGCTCTGTAAATGCCT...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTGGCTCCAGAACCAGGGAGAGCTaGTGCCCCTCTGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LVHLVPSPPPTFLGASGSRTRES*CPSGQR
Trigger: CCTCTGCCCAGAGGGGCAGCAGCTCTCCCTGGTTCT...GGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACCAGGTGGGAGAAGCCTaGGGGATGGTGCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GARNAVSERVCSSCSPRYQVGEA*GMVLLA
Trigger: AGCAAGCAGCACCATCCCGCAGGCTTCTCCCACCTG...GTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGGGTGTCCTTGCAGACTaGAAGCAGGGGAATGGGGGC +
Preference number: 4 (lower is better)
Translates to: PATQCLNGSAALAARGTGGVLAD*KQGNGG
Trigger: GCCCCCATTCCCCTGCTTGCAGTCTGCAAGGACACC...CCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGGGTGTCCTTGCAGACTaGAAGCAGGGGAATGGGGGC +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTGVLAD*KQGNGG
Trigger: GCCCCCATTCCCCTGCTTGCAGTCTGCAAGGACACC...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCACGCCTGAGTGGTTaGCTAGAGTCTGCGAGTCGA +
Preference number: 4 (lower is better)
Translates to: LQLLQPEVLGGLQDDQPQPRLSG*LESASR
Trigger: TCGACTCGCAGACTCTAGGCAACCACTCAGGCGTGG...CTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505529.1
CDS-3UTR CCA 90 bp GTGGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCCCACGAAGAAGGGAATaGGCTGCTTCTGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: VATTQGGGFPQVSEGRQSPRRRE*AASERW
Trigger: CCACCTTTCAGAAGCAGCCCATTCCCTTCTTCGTGG...GGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTTCTCGGAGCAATTGTaGATTGCGCAGGTGACGTAC +
Preference number: 4 (lower is better)
Translates to: GGGFPQVSEGRQSSRRLCFSEQL*IAQVTY
Trigger: GTACGTCACCTGCGCAATCCACAATTGCTCCGAGAA...GCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCGTAGCGCACGCCCCGTaGGTCCGACTGGTACAGGTT +
Preference number: 4 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLVAHAP*VRLVQV
Trigger: AACCTGTACCAGTCGGACCCACGGGGCGTGCGCTAC...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATGAGCGGAAGCTGATGTaGCCAAAGACCGTCATGACC +
Preference number: 4 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHERKLM*PKTVMT
Trigger: GGTCATGACGGTCTTTGGCCACATCAGCTTCCGCTC...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTGGCTCCGGTCGCCCTGCAGGTTaGAGAGCTCCCAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LVHLVPSPPPTFLGASGSGRPAG*RAPRSC
Trigger: ACAGCTCCTGGGAGCTCTCCAACCTGCAGGGCGACC...GGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCAAGCACTTGTTGGTGCTaGACTCTGAGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSQGSMLPVGPGPALCSPSTCWC*TLRRRS
Trigger: GCTCCTCCTCCTCAGAGTCCAGCACCAACAAGTGCT...TGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCGTCAGGCGGGGACAATaGGTTAAACCAGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRVRRGQ*VKPEVG
Trigger: GCCAACTTCTGGTTTAACCCATTGTCCCCGCCTGAC...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAACACCCTCACACACGTTaGACACCACTTTCCGGTACC +
Preference number: 4 (lower is better)
Translates to: GASPAAGFAGGSVPSVGEHPHTR*TPLSGT
Trigger: GGTACCGGAAAGTGGTGTCCAACGTGTGTGAGGGTG...TTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCGTGAGGTTCACCTCCTaGTTGAGGCCAATGACAGGA +
Preference number: 4 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCVRFTS*LRPMTG
Trigger: TCCTGTCATTGGCCTCAACCAGGAGGTGAACCTCAC...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCGTACACGGTCCTGCCTaGCCGTTTCCTGATGAAATT +
Preference number: 4 (lower is better)
Translates to: GGGFPQVSEGRQSSRRLCVHGPA*PFPDEI
Trigger: AATTTCATCAGGAAACGGCCAGGCAGGACCGTGTAC...GCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329016.10
CDS-3UTR CCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCTTCTCGTTGTGCATTTaGGCGTACACGGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRFSLCI*AYTVLP
Trigger: AGGCAGGACCGTGTACGCCCAAATGCACAACGAGAA...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCGTTCTGTGCCCTCCGTaGGTGAAAAGACAGATGCTG +
Preference number: 4 (lower is better)
Translates to: PGLCGEGARNAVSERVCSVLCPP*VKRQML
Trigger: CAGCATCTGTCTTTTCACCCACGGAGGGCACAGAAC...GCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTAGCCGCCGGCTTTGCTaGTGGTTCTGTGCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGSRRLC*WFCALR
Trigger: ACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCT...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp AACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCGGGCCTGGGCGGGCTTaGATTTATCAGAGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NAVSERVCSSCSPRYWEGGPGRA*IYQRGW
Trigger: CCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCC...GCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp TGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTGCAAAGGTGTCCTTGCAGACAGGGTGGTGTGGTGTTaGGAGGGCCTGGCACCCGGG +
Preference number: 4 (lower is better)
Translates to: CGWGGQQDKNPCKGVLADRVVWC*EGLAPG
Trigger: CCCGGGTGCCAGGCCCTCCCAACACCACACCACCCT...GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACACAGAGCCACCCCGGTaGCTACCGCCGGCTATAAAG +
Preference number: 4 (lower is better)
Translates to: GARNAVSERVCSSCSPRYTEPPR*LPPAIK
Trigger: CTTTATAGCCGGCGGTAGCCACCGGGGTGGCTCTGT...GTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTGGCTCCCTACCCCGTCTGCCCTaGGGAGAACCAGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LVHLVPSPPPTFLGASGSLPRLP*GEPGRA
Trigger: AGCTCTCCCTGGTTCTCCCCAGGGCAGACGGGGTAG...GGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGAGTGAGGAACCATaGGCACTGGGTCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: PATQCLNGSAALAARGTGRSEEP*ALGPEP
Trigger: GGGCTCAGGACCCAGTGCCCATGGTTCCTCACTCCT...CCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACAGAGCCCAGACCCGGTaGGAGAACAGCCATCAGGTG +
Preference number: 4 (lower is better)
Translates to: GARNAVSERVCSSCSPRYRAQTR*ENSHQV
Trigger: CACCTGATGGCTGTTCTCCCACCGGGTCTGGGCTCT...GTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGAAAACTGGTACATCTaGTGCCGTCTCCACCACCCA +
Preference number: 4 (lower is better)
Translates to: EGAFRRSLRGASPAAGFAENWYI*CRLHHP
Trigger: TGGGTGGTGGAGACGGCACCAGATGTACCAGTTTTC...AGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGGAAAACTGGTACATCTaGTGCCGTCTCCACCACCCA +
Preference number: 4 (lower is better)
Translates to: GFPQVSEGRQSSRRLCWWENWYI*CRLHHP
Trigger: TGGGTGGTGGAGACGGCACCAGATGTACCAGTTTTC...CCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACCACCATCCAGGGCTCTaGCGTTCTCCCGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GARNAVSERVCSSCSPRYHHPGL*RSPALR
Trigger: TCTCAGAGCGGGAGAACGCCAGAGCCCTGGATGGTG...GTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCTCAGACATGGTGGATaGGAGAACGTCTGCACTGTC +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRLRHGG*ENVCTV
Trigger: GACAGTGCAGACGTTCTCCCATCCACCATGTCTGAG...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGGGTGGGCAGGTAGGGTaGGGAGAGAGCTTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTGGQVG*GESFGS
Trigger: AGACCCAAAGCTCTCTCCCCACCCTACCTGCCCACC...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGGACAACTTGTAGGGTaGCCTCTGGAGTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ARNAVSERVCSSCSPRYWGQLVG*PLEWGG
Trigger: CCCTCCCCACTCCAGAGGCCACCCTACAAGTTGTCC...CCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CGGAACTCTGACAGAGCCACCCCGGTGGCTACCGCCGGCTATAAAGACAGAGAGCACCAGGCTGGAGGGTaGGCTTGGTGTAGGACGTCC +
Preference number: 4 (lower is better)
Translates to: RNSDRATPVATAGYKDREHQAGG*AWCRTS
Trigger: GGACGTCCTACACCAAGCTCACCCTCCAGCCTGGTG...CTCTCTGTCTTTATAGCCGGCGGTAGCCACCGGGGTGGCTCTGTCAGAGTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTGGCTCCACCGCCACGAACACCTaGCTCTCGTCCGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: LVHLVPSPPPTFLGASGSTATNT*LSSVLM
Trigger: CATCAGCACGGACGAGAGTCAGGTGTTCGTGGCGGT...GGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AGCTCAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCCTCCTCCGCCTGCCGTaGGCTGCGCACGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SSDMVDGRTSALSFGFTPLLRLP*AAHVLQ
Trigger: CTGCAGGACGTGCGCAGCTCACGGCAGGCGGAGGAG...GGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTGAGCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGGTTGGTGCTGGACTCTaGGGAGGAGGAGCGCTCAAA +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTVGAGL*GGGALK
Trigger: TTTGAGCGCTCCTCCTCCTCAGAGTCCAGCACCAAC...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCTGGAGAGCAGCCGGGTaGCCACCAGGCCCACGTCTT +
Preference number: 4 (lower is better)
Translates to: PWVHRRERIRLSQMPPPSWRAAG*PPGPRL
Trigger: AAGACGTGGGCCTGGTGGTCACCCGGCTGCTCTCCA...GGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGCTGCGAAGAGCCCGATaGCAAACAGCACCACTACCG +
Preference number: 4 (lower is better)
Translates to: ARNAVSERVCSSCSPRYWLRRAR*QTAPLP
Trigger: CGGTAGTGGTGCTGTTTGTCATCGGGCTCTTCGCAG...CCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR TCA 90 bp AGGCACTGTGAGCTAAGGGGGAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGCCGCAACGCAGTGTCTaGACGGGTCTGCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: RHCELRGRAVPRVPCCPWPQRSV*TGLQLL
Trigger: CAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGG...CCACGGGCAACATGGAACCCTGGGAACTGCCCTCCCCCTTAGCTCACAGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp TGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTGCAAAGGTGTCCTTGCAGACGGCGTTCTCCCCCTCTaGGAGGGAGGCCACGGTCAT +
Preference number: 4 (lower is better)
Translates to: CGWGGQQDKNPCKGVLADGVLPL*EGGHGH
Trigger: ATGACCGTGGCCTCCCTCTCAGAGGGGGAGAACGCC...GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTGGCTCCTATGTGCATGGCAGCTaGTGGCCTCGTTCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: LVHLVPSPPPTFLGASGSYVHGS*WPRSQA
Trigger: CGCCTGGGAACGAGGCCATCAGCTGCCATGCACATA...GGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp ACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCAACCTTCCCCATGTCTaGGTGGTAGTACTTCGTCAG +
Preference number: 4 (lower is better)
Translates to: TTQGGGFPQVSEGRQSSRNLPHV*VVVLRQ
Trigger: CTGACGAAGTACTACCACGCAGACATGGGGAAGGTT...GCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCTTCCGGAAACTTCTCTaGTGGCCCATGATACAGCGG +
Preference number: 4 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCAFRKLL*WPMIQR
Trigger: CCGCTGTATCATGGGCCAGCAGAGAAGTTTCCGGAA...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCGTGTCTGAACGGGTCTaGAGCTCTTGCAGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLVSERV*SSCSPR
Trigger: CCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACAC...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp AACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCGTGTCTGAACGGGTCTaGAGCTCTTGCAGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: NAVSERVCSSCSPRYWEGVSERV*SSCSPR
Trigger: CCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACAC...GCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR GCA 90 bp AGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCCAAGGCATTTACAGAGCTaGAGTTTCCAGCCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SSCSPRYWEGSRTTSLSPRHLQS*SFQPEG
Trigger: GCCCTCCGGCTGGAAACTGCAGCTCTGTAAATGCCT...TGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTAACTGGTACATCTGGTaGCGTCTCCACCACCCACCT +
Preference number: 4 (lower is better)
Translates to: GLCGEGARNAVSERVCSSNWYIW*RLHHPP
Trigger: AGGTGGGTGGTGGAGACGGCACCAGATGTACCAGTT...AGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCAGAGGAGACACCCTGGGCACTCAGGGAAAGGGGCTCCCGAGTACGGAACTCTCAGGCTGTCTCAGATaGCACCTCCTTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GRGDTLGTQGKGLPSTELSGCLR*HLLPRC
Trigger: GCACCTGGGAAGGAGGTGGCATCTGAGACAGCCTGA...GAGTTCCGTACTCGGGAGCCCCTTTCCCTGAGTGCCCAGGGTGTCTCCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGTCTCTTTGTTATGTaGATGGCAGCTGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: GGPGLCGEGARNAVSERVCLFVM*MAADGL
Trigger: GAGGCCATCAGCTGCCATGCACATAACAAAGAGACA...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp AGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCCAGGATCAAGATCACGCTaGTGTTCTCGCCCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SSCSPRYWEGSRTTSLSPGSRSR*CSRPSS
Trigger: ACTGGACGGGCGAGAACAGCAGCGTGATCTTGATCC...TGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCGATCTGCAGATCCTTTaGCAATGCATACTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: GGPGLCGEGARNAVSERVDLQIL*QCILRQ
Trigger: CTGCCGAAGTATGCATTGCCAAAGGATCTGCAGATC...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCACATTCATGTCCATGCTaGGTGGCCTCAGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: SSQGSMLPVGPGPALCSPHSCPC*VASGNP
Trigger: GGGATTACCTGAGGCCACCCAGCATGGACATGAATG...TGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTGGCTCCAGGTGCAGGTGCAGGTaGCAGTCTGGAGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LVHLVPSPPPTFLGASGSRCRCR*QSGGLQ
Trigger: CTGCAAGCCTCCAGACTGCCACCTGCACCTGCACCT...GGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCACCCATGATGAGGCCTaGGGCGGTGTCCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLTHDEA*GGVLGV
Trigger: CACACCAAGGACACCGCCCCAGGCCTCATCATGGGT...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTGGCTCCACCCATGATGAGGCCTaGGGCGGTGTCCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LVHLVPSPPPTFLGASGSTHDEA*GGVLGV
Trigger: CACACCAAGGACACCGCCCCAGGCCTCATCATGGGT...GGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGGCAGAGCACTTGTTaGTGCTGGACTCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLCGEGARNAVSERVCSSWQSTC*CWTLRR
Trigger: CCTCCTCAGAGTCCAGCACCAACAAGTGCTCTGCCA...AGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCAGTTCTGTGCCCTCCGTaGGTGAAAAGACAGATGCTG +
Preference number: 4 (lower is better)
Translates to: SSQGSMLPVGPGPALCSPVLCPP*VKRQML
Trigger: CAGCATCTGTCTTTTCACCCACGGAGGGCACAGAAC...TGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTGCAAAGGTGTCCTTGCAGACCGCCGGCTTTGCTGGTaGTTCTGTGCCCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: CGWGGQQDKNPCKGVLADRRLCW*FCALRG
Trigger: CCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCG...GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTCACCACCCACCTTTCTaGGGGCATCTGGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGHHPPF*GHLAPS
Trigger: GGAAGGAGCCAGATGCCCCCAGAAAGGTGGGTGGTG...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AGGCACTGTGAGCTAAGGGGGAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGGGGAATGGGGGCTGTaGCAAGGTCCCAGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: RHCELRGRAVPRVPCCPWGEWGL*QGPRES
Trigger: TGACTCTCTGGGACCTTGCCACAGCCCCCATTCCCC...CCACGGGCAACATGGAACCCTGGGAACTGCCCTCCCCCTTAGCTCACAGTGCCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGACGCCTGGATCTCCATaGGTGCACAGACGGGAACGT +
Preference number: 4 (lower is better)
Translates to: PATQCLNGSAALAARGTGTPGSP*VHRRER
Trigger: ACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGT...CCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGAGGACCACGCCTGAGTaGTTGCCTAGAGTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: ARNAVSERVCSSCSPRYWRTTPE*LPRVCE
Trigger: CTCGCAGACTCTAGGCAACCACTCAGGCGTGGTCCT...CCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505529.1
3UTR CAA 72 bp GCCATCAGGTGGGAGAAGCCTGCGGGATGGTGCTGCTaGCTGGTAGGAGTGAGGAACCATGGGCACTGGGTC +
Preference number: 4 (lower is better)
Translates to: AIRWEKPAGWCC*LVGVRNHGHWV
Trigger: GACCCAGTGCCCATGGTTCCTCACTCCTACCAGCAAGCAGCACCATCCCGCAGGCTTCTCCCACCTGATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCCATGTGGATTGCGCAGGTaGCGTACCGAAAATCTCCAC +
Preference number: 4 (lower is better)
Translates to: SSCSPRYWEGSRTTSLSPCGLRR*RTENLH
Trigger: GTGGAGATTTTCGGTACGTCACCTGCGCAATCCACA...TGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AGGCACTGTGAGCTAAGGGGGAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGCTGCGAAGAGCCCGATaGCAAACAGCACCACTACCG +
Preference number: 4 (lower is better)
Translates to: RHCELRGRAVPRVPCCPWLRRAR*QTAPLP
Trigger: CGGTAGTGGTGCTGTTTGTCATCGGGCTCTTCGCAG...CCACGGGCAACATGGAACCCTGGGAACTGCCCTCCCCCTTAGCTCACAGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTGGCTCCTGTGCCCTCCGTGGGTaGAAAGACAGATGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LVHLVPSPPPTFLGASGSCALRG*KDRCWG
Trigger: ACCCCAGCATCTGTCTTTTCACCCACGGAGGGCACA...GGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AGCTCAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCATGGGCACTGGGTCCTaGGCCCGCCCTACCCCGTCT +
Preference number: 4 (lower is better)
Translates to: SSDMVDGRTSALSFGFTPMGTGS*ARPTPS
Trigger: AGACGGGGTAGGGCGGGCTCAGGACCCAGTGCCCAT...GGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCCAGATCCTTTGGCAATaGATACTTCGGCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GGGFPQVSEGRQSSRRLCQILWQ*ILRQLH
Trigger: ATGAAGCTGCCGAAGTATGCATTGCCAAAGGATCTG...GCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCCGTGCTGATGATCTaGAGATCCTTTGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCSVLMI*RSFGNA
Trigger: TGCATTGCCAAAGGATCTGCAGATCATCAGCACGGA...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTTCCATTCATGTCCATaGTGGGTGGCCTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: PGLCGEGARNAVSERVCSFHSCP*WVASGN
Trigger: ATTACCTGAGGCCACCCAGCATGGACATGAATGGAA...GCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTTTCCATTCATGTCCATaGTGGGTGGCCTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: EGAFRRSLRGASPAAGFAFHSCP*WVASGN
Trigger: ATTACCTGAGGCCACCCAGCATGGACATGAATGGAA...AGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAGCCTCCTCCTCGCCGCACTaGCTGGAGAATGAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QTWWMGERLHCHSDSPPASSSPH*LENEGR
Trigger: CCGGCCCTCATTCTCCAGGCAGTGCGGCGAGGAGGA...GGCTGGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGCAGAGCACTTGTTGGTaGTGGACTCTGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTQSTCW*WTLRRR
Trigger: CCTCCTCCTCAGAGTCCAGCACCAACAAGTGCTCTG...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCGTCAGGACATCACCCTaGTCCTGCCGCACCACAAAC +
Preference number: 4 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLVRTSP*SCRTTN
Trigger: GTTTGTGGTGCGGCAGGAGCAGGGTGATGTCCTGAC...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTGCAAAGGTGTCCTTGCAGACCGGGTCTGCAGCTCTTaGAGCCCGAGGTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: CGWGGQQDKNPCKGVLADRVCSS*SPRYWE
Trigger: CTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCG...GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp AGCTCAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCCCGCCCTACCCCGTCTaGCCTGGGGAGAACCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSDMVDGRTSALSFGFTPPPYPV*PGENQG
Trigger: TCCCTGGTTCTCCCCAGGGCAGACGGGGTAGGGCGG...GGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTGAGCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCAGAGGAGACACCCTGGGCACTCAGGGAAAGGGGCTCCCGAGTACGGAACTCAACTGGTACATCTGGTaGCGTCTCCACCACCCACCT +
Preference number: 4 (lower is better)
Translates to: GRGDTLGTQGKGLPSTELNWYIW*RLHHPP
Trigger: AGGTGGGTGGTGGAGACGGCACCAGATGTACCAGTT...GAGTTCCGTACTCGGGAGCCCCTTTCCCTGAGTGCCCAGGGTGTCTCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTTCAGGCTGTCTCAGATaGCACCTCCTTCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGSGCLR*HLLPRC
Trigger: GCACCTGGGAAGGAGGTGGCATCTGAGACAGCCTGA...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGAGAACACGTGGTCTTTaGTCACTCGCTCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GFPQVSEGRQSSRRLCWWRTRGL*SLALAE
Trigger: TTCTGCAAGAGCGAGTGACCAAAGACCACGTGTTCT...CCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCTTGGGCTTCCACGTaGACCAAGTCAGGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: NAVSERVCSSCSPRYWEGSWAST*TKSGSA
Trigger: CGCTGACCCTGACTTGGTCCACGTGGAAGCCCAAGA...GCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AGGCACTGTGAGCTAAGGGGGAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGTCTCCACCGAGGTCTTaGGCTTCCACGTGGACCAAG +
Preference number: 4 (lower is better)
Translates to: RHCELRGRAVPRVPCCPWSPPRS*ASTWTK
Trigger: CTTGGTCCACGTGGAAGCCCAAGACCTCGGTGGAGA...CCACGGGCAACATGGAACCCTGGGAACTGCCCTCCCCCTTAGCTCACAGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCCACATTCATGTCCATGCTaGGTGGCCTCAGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: SSCSPRYWEGSRTTSLSPHSCPC*VASGNP
Trigger: GGGATTACCTGAGGCCACCCAGCATGGACATGAATG...TGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTCTGGAGGCTTGCAGTTaGTTGGTTTTCCATTCATGT +
Preference number: 4 (lower is better)
Translates to: QGGGFPQVSEGRQSSRRLLEACS*LVFHSC
Trigger: ACATGAATGGAAAACCAACCAACTGCAAGCCTCCAG...AAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACAGCACTTGTTGGTGCTaGACTCTGAGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GARNAVSERVCSSCSPRYSTCWC*TLRRRS
Trigger: GCTCCTCCTCCTCAGAGTCCAGCACCAACAAGTGCT...GTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AGGCACTGTGAGCTAAGGGGGAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGTCAGCACCTGCTGGATaGCGGCGAGCCTCTTATCAC +
Preference number: 4 (lower is better)
Translates to: RHCELRGRAVPRVPCCPWSAPAG*RRASYH
Trigger: GTGATAAGAGGCTCGCCGCCATCCAGCAGGTGCTGA...CCACGGGCAACATGGAACCCTGGGAACTGCCCTCCCCCTTAGCTCACAGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCATCAGCACCTGCTGGATaGCGGCGAGCCTCTTATCAC +
Preference number: 4 (lower is better)
Translates to: SAGKEPATQCLNGSAALASAPAG*RRASYH
Trigger: GTGATAAGAGGCTCGCCGCCATCCAGCAGGTGCTGA...TGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGAGAAGCCTGCGGGATaGTGCTGCTTGCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: SAGKEPATQCLNGSAALAEKPAG*CCLLVG
Trigger: TCCTACCAGCAAGCAGCACCATCCCGCAGGCTTCTC...TGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTGCAAAGGTGTCCTTGCAGACGACAGGTGGAAGGGGTaGGGACACCTCCACGCCTGT +
Preference number: 4 (lower is better)
Translates to: CGWGGQQDKNPCKGVLADDRWKG*GHLHAC
Trigger: ACAGGCGTGGAGGTGTCCCCACCCCTTCCACCTGTC...GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCAGAGGAGACACCCTGGGCACTCAGGGAAAGGGGCTCCCGAGTACGGAACTCTCCTTCCCAGGTGCTTaGGTCCACATGCCCAACATG +
Preference number: 4 (lower is better)
Translates to: GRGDTLGTQGKGLPSTELSFPGA*VHMPNM
Trigger: CATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA...GAGTTCCGTACTCGGGAGCCCCTTTCCCTGAGTGCCCAGGGTGTCTCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GTGGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCTCTTTGTTATGTGCATaGCAGCTGATGGCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: VATTQGGGFPQVSEGRQSSLLCA*QLMASF
Trigger: GAACGAGGCCATCAGCTGCCATGCACATAACAAAGA...GGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp TCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAATATTCCACCAGCTGTaGGCCCAGGTTACCTGCACC +
Preference number: 4 (lower is better)
Translates to: SAGKEPATQCLNGSAALAIFHQL*AQVTCT
Trigger: GGTGCAGGTAACCTGGGCTCACAGCTGGTGGAATAT...TGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTATATTCCACCAGCTGTaGGCCCAGGTTACCTGCACC +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGIFHQL*AQVTCT
Trigger: GGTGCAGGTAACCTGGGCTCACAGCTGGTGGAATAT...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AGGCACTGTGAGCTAAGGGGGAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGAATCGGAGCGGAAGCTaGTGTGGCCAAAGACCGTCA +
Preference number: 4 (lower is better)
Translates to: RHCELRGRAVPRVPCCPWNRSGS*CGQRPS
Trigger: TGACGGTCTTTGGCCACATCAGCTTCCGCTCCGATT...CCACGGGCAACATGGAACCCTGGGAACTGCCCTCCCCCTTAGCTCACAGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTAAAACTGCAGAGGCATaGCTTGAAATTGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: QGGGFPQVSEGRQSSRRLKTAEA*LEIDPA
Trigger: TGCTGGATCAATTTCAAGTCATGCCTCTGCAGTTTT...AAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTCTCGCAGGAGGAAGCTaGTCTTCTGTGCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGLAGGS*SSVRSA
Trigger: TGCTGAACGCACAGAAGATCAGCTTCCTCCTGCGAG...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCCCGCAACGCAGTGTCTaGACGGGTCTGCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: PWVHRRERIRLSQMPPPSPQRSV*TGLQLL
Trigger: CAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGG...GGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp AGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATCCGTGCTGATGATCTaGAGATCCTTTGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: SSQGSMLPVGPGPALCSPSVLMI*RSFGNA
Trigger: TGCATTGCCAAAGGATCTGCAGATCATCAGCACGGA...TGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCGTTCCCAGGCGCCCAGGTCTACCTGAACATCAGATATGCAGACCCTCGAATTACGCTCTCCTCCGCCTaGCGTGAGCTGCGCACGTCC +
Preference number: 4 (lower is better)
Translates to: SFPGAQVYLNIRYADPRITLSSA*RELRTS
Trigger: GGACGTGCGCAGCTCACGGCAGGCGGAGGAGAGCGT...AATTCGAGGGTCTGCATATCTGATGTTCAGGTAGACCTGGGCGCCTGGGAACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTGGCAGTCTGGAGGCTTaGAGTTGGTTGGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GLCGEGARNAVSERVCSSGSLEA*SWLVFH
Trigger: ATGGAAAACCAACCAACTGCAAGCCTCCAGACTGCC...AGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCCCTTGGTGTGCACGGTaGCTGATACGTAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLPWCAR*LIRRGC
Trigger: ACAACCCCTACGTATCAGGCACCGTGCACACCAAGG...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp AGCTCAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCTTCCCACAGGCGGCCTaGACCGTCACACGCACGTCG +
Preference number: 4 (lower is better)
Translates to: SSDMVDGRTSALSFGFTPFPQAA*TVTRTS
Trigger: CGACGTGCGTGTGACGGTGCAGGCCGCCTGTGGGAA...GGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGTGCTCCTTCTCGTTGTaGATTTGGGCGTACACGGTC +
Preference number: 4 (lower is better)
Translates to: ARNAVSERVCSSCSPRYWCSFSL*IWAYTV
Trigger: GACCGTGTACGCCCAAATGCACAACGAGAAGGAGCA...CCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR GCA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCTCAACAAGGAGCGGGTaGCTCCTCCCCACCGGGCAC +
Preference number: 4 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGASTRSG*LLPTGH
Trigger: GTGCCCGGTGGGGAGGAGGCACCCGCTCCTTGTTGA...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCTGTGTGCCTGACGCTTaGAGGCGGCCTGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGACVPDA*RRPAGQ
Trigger: CTGGCCAGCAGGCCGCCTGCAAGCGTCAGGCACACA...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAATGGTTGCCTAGAGTCTaGGAGTCGAGATCATCATCT +
Preference number: 4 (lower is better)
Translates to: GASPAAGFAGGSVPSVGEWLPRV*ESRSSS
Trigger: AGATGATGATCTCGACTCGCAGACTCTAGGCAACCA...TTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505529.1
CDS-3UTR CCA 90 bp GCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGCCACGAAGAAGGGAATaGGCTGCTTCTGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: ARNAVSERVCSSCSPRYWPRRRE*AASERW
Trigger: CCACCTTTCAGAAGCAGCCCATTCCCTTCTTCGTGG...CCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTCATGTCCATGCTGGGTaGCCTCAGGTAATCCCAGTC +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGHVHAG*PQVIPV
Trigger: GACTGGGATTACCTGAGGCCACCCAGCATGGACATG...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTGGCTCCCGGAAACTTCTCTGCTaGCCCATGATACAGCGGTCG +
Preference number: 4 (lower is better)
Translates to: LVHLVPSPPPTFLGASGSRKLLC*PMIQRS
Trigger: CGACCGCTGTATCATGGGCCAGCAGAGAAGTTTCCG...GGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGTGAGGTTCACCTCCTaGTTGAGGCCAATGACAGGA +
Preference number: 4 (lower is better)
Translates to: ARNAVSERVCSSCSPRYWVRFTS*LRPMTG
Trigger: TCCTGTCATTGGCCTCAACCAGGAGGTGAACCTCAC...CCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAGCCGCACACGGAGGACCCTaGAGTCCTGCAGCACCGAGT +
Preference number: 4 (lower is better)
Translates to: QTWWMGERLHCHSDSPPAAHGGP*SPAAPS
Trigger: ACTCGGTGCTGCAGGACTCCAGGGTCCTCCGTGTGC...GGCTGGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCGCGTTCAGCACCTGCTaGATGGCGGCGAGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: PWVHRRERIRLSQMPPPSAFSTC*MAASLL
Trigger: TAAGAGGCTCGCCGCCATCCAGCAGGTGCTGAACGC...GGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGGTTCTGTGCCCTCCGTaGGTGAAAAGACAGATGCTG +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTVLCPP*VKRQML
Trigger: CAGCATCTGTCTTTTCACCCACGGAGGGCACAGAAC...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp AAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTATTTATCAGAGGGGGTaGTGCCTGTCGCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: KEPATQCLNGSAALAARGIYQRG*CLSPGV
Trigger: CACACCAGGCGACAGGCACCACCCCCTCTGATAAAT...ACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CCA 90 bp TCGTTCCCAGGCGCCCAGGTCTACCTGAACATCAGATATGCAGACCCTCGAATTCTGAGCGACAGCACGTaGGGCGGCCGTGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SFPGAQVYLNIRYADPRILSDST*GGRVWG
Trigger: ACCCCACACACGGCCGCCCCACGTGCTGTCGCTCAG...AATTCGAGGGTCTGCATATCTGATGTTCAGGTAGACCTGGGCGCCTGGGAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCCCACCGGGCACTGTTTaGGGCGTGAAGATTCACCCC +
Preference number: 4 (lower is better)
Translates to: PWVHRRERIRLSQMPPPSPPGTV*GVKIHP
Trigger: GGGGTGAATCTTCACGCCCCAAACAGTGCCCGGTGG...GGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAGCCGACAGGTGGAAGGGGTaGGGACACCTCCACGCCTGT +
Preference number: 4 (lower is better)
Translates to: QTWWMGERLHCHSDSPPADRWKG*GHLHAC
Trigger: ACAGGCGTGGAGGTGTCCCCACCCCTTCCACCTGTC...GGCTGGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCATCCTTCCCAGGTGCTTaGGTCCACATGCCCAACATG +
Preference number: 4 (lower is better)
Translates to: SAGKEPATQCLNGSAALASFPGA*VHMPNM
Trigger: CATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA...TGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCCCCGACCCAGGGAGATaGGGTTCCAGTCTCCATGGG +
Preference number: 4 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGAPDPGR*GSSLHG
Trigger: CCCATGGAGACTGGAACCTCATCTCCCTGGGTCGGG...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AGCTCAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCCTACCGCAGGCACTGTaGGCTAAGGGGGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SSDMVDGRTSALSFGFTPLPQAL*AKGEGS
Trigger: ACTGCCCTCCCCCTTAGCTCACAGTGCCTGCGGTAG...GGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTGAGCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATTTGGTCACTCGCTCTTaGAGAAGTGTCCACTTTTTC +
Preference number: 4 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHLVTRS*RSVHFF
Trigger: GAAAAAGTGGACACTTCTGCAAGAGCGAGTGACCAA...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CCCCGTGGGCCTGGGCGGGCTTGGATTTATCAGAGGGGGTGGTGCCTGTCGCCTTTGGTCACTCGCTCTTaGAGAAGTGTCCACTTTTTC +
Preference number: 4 (lower is better)
Translates to: PRGPGRAWIYQRGWCLSPLVTRS*RSVHFF
Trigger: GAAAAAGTGGACACTTCTGCAAGAGCGAGTGACCAA...AGGCGACAGGCACCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCACGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCAGAGGAGACACCCTGGGCACTCAGGGAAAGGGGCTCCCGAGTACGGAACTCGGAGCAATTGTGGATTaGGCAGGTGACGTACCGAAA +
Preference number: 4 (lower is better)
Translates to: GRGDTLGTQGKGLPSTELGAIVD*AGDVPK
Trigger: TTTCGGTACGTCACCTGCGCAATCCACAATTGCTCC...GAGTTCCGTACTCGGGAGCCCCTTTCCCTGAGTGCCCAGGGTGTCTCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp AGCTCAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCCGCCTCATCGTGGCCTaGCGTGTTCTCTGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SSDMVDGRTSALSFGFTPRLIVA*RVLCPD
Trigger: GTCAGGGCAGAGAACACGGCAGGCCACGATGAGGCG...GGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTGAGCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCATTGCTGGTGGTTCTGTaGCCTCCGTGGGTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: SAGKEPATQCLNGSAALALLVVL*PPWVKR
Trigger: TCTTTTCACCCACGGAGGGCACAGAACCACCAGCAA...TGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR GCA 90 bp GGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACCAGGACAAGAATCCCTaGAAAGGTGTCCTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: GARNAVSERVCSSCSPRYQDKNP*KGVLAD
Trigger: GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTG...GTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCACTGGATCTCCATGGGTaGACAGACGGGAACGTATCA +
Preference number: 4 (lower is better)
Translates to: SAGKEPATQCLNGSAALALDLHG*TDGNVS
Trigger: TGATACGTTCCCGTCTGTGCACCCATGGAGATCCAG...TGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACAGACCAGAACACGTaGTCTTTGGTCACTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTTDQNT*SLVTRS
Trigger: AGAGCGAGTGACCAAAGACCACGTGTTCTGGTCTGT...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGACAGACCAGAACACGTaGTCTTTGGTCACTCGCTCT +
Preference number: 4 (lower is better)
Translates to: PATQCLNGSAALAARGTGTDQNT*SLVTRS
Trigger: AGAGCGAGTGACCAAAGACCACGTGTTCTGGTCTGT...CCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCCGTGGGCCTGGGCGGGCTTGGATTTATCAGAGGGGGTGGTGCCTGTCGCCTCTGGAGGCTTGCAGTTaGTTGGTTTTCCATTCATGT +
Preference number: 4 (lower is better)
Translates to: PRGPGRAWIYQRGWCLSPLEACS*LVFHSC
Trigger: ACATGAATGGAAAACCAACCAACTGCAAGCCTCCAG...AGGCGACAGGCACCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCACGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCGTGCAGGTGGCAGTCTaGAGGCTTGCAGTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PWVHRRERIRLSQMPPPSVQVAV*RLAVGW
Trigger: CCAACCAACTGCAAGCCTCCAGACTGCCACCTGCAC...GGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTCGCCGGCTTTGCTGGTaGTTCTGTGCCCTCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTRRLCW*FCALRG
Trigger: CCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCG...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCCATCCAGTCTCCATGGGTaGTTTTACTCAACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSCSPRYWEGSRTTSLSPSSLHG*FYSTRS
Trigger: GCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGA...TGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCGTTCCCAGGCGCCCAGGTCTACCTGAACATCAGATATGCAGACCCTCGAATTTTGCAGGCGGCCTGCTaGCCAGGGACAGGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SFPGAQVYLNIRYADPRILQAAC*PGTGVG
Trigger: ACCCACACCTGTCCCTGGCCAGCAGGCCGCCTGCAA...AATTCGAGGGTCTGCATATCTGATGTTCAGGTAGACCTGGGCGCCTGGGAACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp TCGTTCCCAGGCGCCCAGGTCTACCTGAACATCAGATATGCAGACCCTCGAATTCGCCTTCGTCTGCGCTaGGGAATAGGCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SFPGAQVYLNIRYADPRIRLRLR*GIGSGP
Trigger: GGGACCAGAGCCTATTCCTCAGCGCAGACGAAGGCG...AATTCGAGGGTCTGCATATCTGATGTTCAGGTAGACCTGGGCGCCTGGGAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AGGCACTGTGAGCTAAGGGGGAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGTTTCCCCAAGTCAGATaGCACGTAGAGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RHCELRGRAVPRVPCCPWFPQVR*HVELAL
Trigger: GAGAGCAAGCTCTACGTGTCATCTGACTTGGGGAAA...CCACGGGCAACATGGAACCCTGGGAACTGCCCTCCCCCTTAGCTCACAGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCGACCACAGTCTGACGTaGTGTACATTTCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCDHSLT*CTFLLY
Trigger: ATAAAGAAGAAATGTACATCACGTCAGACTGTGGTC...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AGCTCAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCGGATGGAGGTGTCTTTaGTGGCCACGATCACGCCGC +
Preference number: 4 (lower is better)
Translates to: SSDMVDGRTSALSFGFTPGWRCL*WPRSRR
Trigger: GCGGCGTGATCGTGGCCATCAAAGACACCTCCATCC...GGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AGCTCAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCCACTGCAGCTGCACCTaGCTCTGCTGCATGTCCACC +
Preference number: 4 (lower is better)
Translates to: SSDMVDGRTSALSFGFTPHCSCT*LCCMST
Trigger: GGTGGACATGCAGCAGAGTCAGGTGCAGCTGCAGTG...GGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTGAGCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCTCACGTACATGGCCTTaGAGCCGTCCCCAAGGTCTA +
Preference number: 4 (lower is better)
Translates to: PWVHRRERIRLSQMPPPSSRTWP*SRPQGL
Trigger: TAGACCTTGGGGACGGCTTCAAGGCCATGTACGTGA...GGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTCCGTGTTCTCTGCCCTaGCGGACACGCGGTAGATGC +
Preference number: 4 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTPCSLP*RTRGRC
Trigger: GCATCTACCGCGTGTCCGTCAGGGCAGAGAACACGG...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGGCAGTCTGGAGGCTTaGAGTTGGTTGGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SAGKEPATQCLNGSAALAGSLEA*SWLVFH
Trigger: ATGGAAAACCAACCAACTGCAAGCCTCCAGACTGCC...TGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCTCCGGTACCCAAGGCTaGTGGTGTAGGTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGASGTQG*WCRSGP
Trigger: TGGGCCAGACCTACACCAGCAGCCTTGGGTACCGGA...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCGAAGCTGATCTTCTGTaGGTTCAGCACCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLEADLL*VQHLLD
Trigger: ATCCAGCAGGTGCTGAACGCACAGAAGATCAGCTTC...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGAAGCTGATCTTCTGTaGGTTCAGCACCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SAGKEPATQCLNGSAALAEADLL*VQHLLD
Trigger: ATCCAGCAGGTGCTGAACGCACAGAAGATCAGCTTC...TGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CGGAACTCTGACAGAGCCACCCCGGTGGCTACCGCCGGCTATAAAGACAGAGAGCTGCAAAGGTGTCCTTaGAGACTGCAAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RNSDRATPVATAGYKDRELQRCP*RLQAGE
Trigger: TTCCCCTGCTTGCAGTCTGCAAGGACACCTTTGCAG...CTCTCTGTCTTTATAGCCGGCGGTAGCCACCGGGGTGGCTCTGTCAGAGTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGTGTCTCTTTGTTATGTaGATGGCAGCTGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: PATQCLNGSAALAARGTGCLFVM*MAADGL
Trigger: GAGGCCATCAGCTGCCATGCACATAACAAAGAGACA...CCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAGCCTCTCCACCGAGGTCTTaGGCTTCCACGTGGACCAAG +
Preference number: 4 (lower is better)
Translates to: QTWWMGERLHCHSDSPPASPPRS*ASTWTK
Trigger: CTTGGTCCACGTGGAAGCCCAAGACCTCGGTGGAGA...GGCTGGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTGCAAAGGTGTCCTTGCAGACATTTATCAGAGGGGGTaGTGCCTGTCGCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: CGWGGQQDKNPCKGVLADIYQRG*CLSPGV
Trigger: CACACCAGGCGACAGGCACCACCCCCTCTGATAAAT...GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCAGGAGTGAGGAACCATaGGCACTGGGTCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGARSEEP*ALGPEP
Trigger: GGGCTCAGGACCCAGTGCCCATGGTTCCTCACTCCT...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAGCCAGAACAGCCATCAGGTaGGAGAAGCCTGCGGGATGG +
Preference number: 4 (lower is better)
Translates to: QTWWMGERLHCHSDSPPARTAIR*EKPAGW
Trigger: CCATCCCGCAGGCTTCTCCCACCTGATGGCTGTTCT...GGCTGGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCCACCACCCACCTTTCTaGGGGCATCTGGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGAHHPPF*GHLAPS
Trigger: GGAAGGAGCCAGATGCCCCCAGAAAGGTGGGTGGTG...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GAATGCATTGTCTCTTTGTTATGTGCATGGCAGCTGATGGCCTCGTTCCCAGGCCACCAGGCTGGAGGGTaGGCTTGGTGTAGGACGTCC +
Preference number: 4 (lower is better)
Translates to: ECIVSLLCAWQLMASFPGHQAGG*AWCRTS
Trigger: GGACGTCCTACACCAAGCTCACCCTCCAGCCTGGTG...GCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTTTGTCTGGTTTGCTaGTGTTGCCTTAAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: GFPQVSEGRQSSRRLCWWFCLVC*CCLKED
Trigger: ATCTTCTTTAAGGCAACATCAGCAAACCAGACAAAA...CCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGGCACTGCCTGGAGAATaGGGGCCGGAAGTCCACCTT +
Preference number: 4 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTALPGE*GPEVHL
Trigger: AAGGTGGACTTCCGGCCCTCATTCTCCAGGCAGTGC...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTTTCTCTGCTGGCCCATaGTACAGCGGTCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTFSAGP*YSGRPA
Trigger: TGCAGGGCGACCGCTGTATCATGGGCCAGCAGAGAA...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCTGGACGTCCTCACTGTaGCTCACAGGGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGAWTSSL*LTGLVI
Trigger: GATGACCAGCCCTGTGAGTCACAGTGAGGACGTCCA...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGGCATCTCTCGGGAGTTaGTGCTCAGGACCACGCCTG +
Preference number: 4 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTASLGS*CSGPRL
Trigger: CAGGCGTGGTCCTGAGCATCAACTCCCGAGAGATGC...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTGCATCTCTCGGGAGTTaGTGCTCAGGACCACGCCTG +
Preference number: 4 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTASLGS*CSGPRL
Trigger: CAGGCGTGGTCCTGAGCATCAACTCCCGAGAGATGC...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGTATGTGCATGGCAGCTaGTGGCCTCGTTCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTYVHGS*WPRSQA
Trigger: CGCCTGGGAACGAGGCCATCAGCTGCCATGCACATA...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTTACGTAGGGGTTGTCTaGCCAGCGCAGGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTYVGVV*PAQVQV
Trigger: CACCTGCACCTGCGCTGGGCAGACAACCCCTACGTA...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCACATCACCCTGCTCCTaGCGCACCACAAACAGGACG +
Preference number: 4 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGATSPCS*RTTNRT
Trigger: CGTCCTGTTTGTGGTGCGGCAGGAGCAGGGTGATGT...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGCCTGCGGGATGGTGCTaGTTGCTGGTAGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTPAGWC*LLVGVR
Trigger: CCTCACTCCTACCAGCAAGCAGCACCATCCCGCAGG...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp AGCTCAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAAGCCTGCGGGATGGTaGTGCTTGCTGGTAGGAGTG +
Preference number: 4 (lower is better)
Translates to: SSDMVDGRTSALSFGFTPKPAGW*CLLVGV
Trigger: CACTCCTACCAGCAAGCAGCACCATCCCGCAGGCTT...GGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCTCCTCCTCCTTAGGGTaGAAAATCAGAGTTTCCACG +
Preference number: 4 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLSSSLG*KIRVST
Trigger: CGTGGAAACTCTGATTTTCCACCCTAAGGAGGAGGA...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAAAAGGCTTGCAGTTGGTTaGTTTTCCATTCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: APVQPPALLVVLCPPWVKRLAVG*FSIHVH
Trigger: ATGGACATGAATGGAAAACCAACCAACTGCAAGCCT...TTTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GAATGCATTGTCTCTTTGTTATGTGCATGGCAGCTGATGGCCTCGTTCCCAGGCGGTCGCCCTGCAGGTTaGAGAGCTCCCAGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ECIVSLLCAWQLMASFPGGRPAG*RAPRSC
Trigger: ACAGCTCCTGGGAGCTCTCCAACCTGCAGGGCGACC...GCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGACAGAGCCACCCCGGTaGCTACCGCCGGCTATAAAG +
Preference number: 4 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTTEPPR*LPPAIK
Trigger: CTTTATAGCCGGCGGTAGCCACCGGGGTGGCTCTGT...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CGGAACTCTGACAGAGCCACCCCGGTGGCTACCGCCGGCTATAAAGACAGAGAGGGAACTGCAGAAAACTaGTACATCTGGTGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: RNSDRATPVATAGYKDREGTAEN*YIWCRL
Trigger: GAGACGGCACCAGATGTACCAGTTTTCTGCAGTTCC...CTCTCTGTCTTTATAGCCGGCGGTAGCCACCGGGGTGGCTCTGTCAGAGTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTCACCATCCAGGGCTCTaGCGTTCTCCCGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTHHPGL*RSPALR
Trigger: TCTCAGAGCGGGAGAACGCCAGAGCCCTGGATGGTG...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCCTCAGACATGGTGGATaGGAGAACGTCTGCACTGTC +
Preference number: 4 (lower is better)
Translates to: PWVHRRERIRLSQMPPPSLRHGG*ENVCTV
Trigger: GACAGTGCAGACGTTCTCCCATCCACCATGTCTGAG...GGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCCAAGCTCAGACATGGTaGATGGGAGAACGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: PWVHRRERIRLSQMPPPSQAQTW*MGERLH
Trigger: GTGCAGACGTTCTCCCATCCACCATGTCTGAGCTTG...GGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTCCACCGGGCACTGTTTaGGGCGTGAAGATTCACCCC +
Preference number: 4 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTPPGTV*GVKIHP
Trigger: GGGGTGAATCTTCACGCCCCAAACAGTGCCCGGTGG...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCTCCAGGTACAGGATGTaGTGCTCTTCCTCAAACACC +
Preference number: 4 (lower is better)
Translates to: PWVHRRERIRLSQMPPPSSRYRM*CSSSNT
Trigger: GGTGTTTGAGGAAGAGCATCACATCCTGTACCTGGA...GGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCCTCGCAGGAGGAAGCTaGTCTTCTGTGCGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGALAGGS*SSVRSA
Trigger: TGCTGAACGCACAGAAGATCAGCTTCCTCCTGCGAG...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTTGGACGTCCTCACTGTaGCTCACAGGGCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTWTSSL*LTGLVI
Trigger: GATGACCAGCCCTGTGAGTCACAGTGAGGACGTCCA...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAGCCTTCCGGAAACTTCTCTaGTGGCCCATGATACAGCGG +
Preference number: 4 (lower is better)
Translates to: QTWWMGERLHCHSDSPPAFRKLL*WPMIQR
Trigger: CCGCTGTATCATGGGCCAGCAGAGAAGTTTCCGGAA...GGCTGGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAGCCCTGCAAAGGTGTCCTTaGAGACTGCAAGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QTWWMGERLHCHSDSPPALQRCP*RLQAGE
Trigger: TTCCCCTGCTTGCAGTCTGCAAGGACACCTTTGCAG...GGCTGGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTCCTGAACATCAGATATaGAGACCCTCGAATTTACAA +
Preference number: 4 (lower is better)
Translates to: GLCGEGARNAVSERVCSSPEHQI*RPSNLQ
Trigger: TTGTAAATTCGAGGGTCTGCATATCTGATGTTCAGG...AGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCGTTCCCAGGCGCCCAGGTCTACCTGAACATCAGATATGCAGACCCTCGAATTACGGTCAGAGACCCGTaGTCAATGGGGCCTGCGAAT +
Preference number: 4 (lower is better)
Translates to: SFPGAQVYLNIRYADPRITVRDP*SMGPAN
Trigger: ATTCGCAGGCCCCATTGACCACGGGTCTCTGACCGT...AATTCGAGGGTCTGCATATCTGATGTTCAGGTAGACCTGGGCGCCTGGGAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGAGGCTTGCAGTTGGTTaGTTTTCCATTCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTRLAVG*FSIHVH
Trigger: ATGGACATGAATGGAAAACCAACCAACTGCAAGCCT...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCTGGCAGAGCACTTGTTaGTGCTGGACTCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGAWQSTC*CWTLRR
Trigger: CCTCCTCAGAGTCCAGCACCAACAAGTGCTCTGCCA...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp AGCTCAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCCACCCTCACACACGTTaGACACCACTTTCCGGTACC +
Preference number: 4 (lower is better)
Translates to: SSDMVDGRTSALSFGFTPHPHTR*TPLSGT
Trigger: GGTACCGGAAAGTGGTGTCCAACGTGTGTGAGGGTG...GGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTGAGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GAATGCATTGTCTCTTTGTTATGTGCATGGCAGCTGATGGCCTCGTTCCCAGGCGGACAACTTGTAGGGTaGCCTCTGGAGTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ECIVSLLCAWQLMASFPGGQLVG*PLEWGG
Trigger: CCCTCCCCACTCCAGAGGCCACCCTACAAGTTGTCC...GCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GAATGCATTGTCTCTTTGTTATGTGCATGGCAGCTGATGGCCTCGTTCCCAGGCGGAATGGGCTGCTTCTaGAAGGTGGCGCCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: ECIVSLLCAWQLMASFPGGMGCF*KVAPSS
Trigger: AGACGAAGGCGCCACCTTTCAGAAGCAGCCCATTCC...GCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAGCCTTTCCCCAAGTCAGATaGCACGTAGAGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QTWWMGERLHCHSDSPPAFPQVR*HVELAL
Trigger: GAGAGCAAGCTCTACGTGTCATCTGACTTGGGGAAA...GGCTGGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAGCCTCCAGGTACAGGATGTaGTGCTCTTCCTCAAACACC +
Preference number: 4 (lower is better)
Translates to: QTWWMGERLHCHSDSPPASRYRM*CSSSNT
Trigger: GGTGTTTGAGGAAGAGCATCACATCCTGTACCTGGA...GGCTGGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCGTTCCCAGGCGCCCAGGTCTACCTGAACATCAGATATGCAGACCCTCGAATTGATGAAGGCTCCCGCTaGGAAGAGCCCGATGACAAA +
Preference number: 4 (lower is better)
Translates to: SFPGAQVYLNIRYADPRIDEGSR*EEPDDK
Trigger: TTTGTCATCGGGCTCTTCGCAGCGGGAGCCTTCATC...AATTCGAGGGTCTGCATATCTGATGTTCAGGTAGACCTGGGCGCCTGGGAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GAATGCATTGTCTCTTTGTTATGTGCATGGCAGCTGATGGCCTCGTTCCCAGGCCACCTCCTTCCCAGGTaGTTGGGTCCACATGCCCAA +
Preference number: 4 (lower is better)
Translates to: ECIVSLLCAWQLMASFPGHLLPR*LGPHAQ
Trigger: TTGGGCATGTGGACCCAAGCACCTGGGAAGGAGGTG...GCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTAATGGGGCCTGCGAATaGGGCTGTCAGCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTNGACE*GCQHLL
Trigger: GAGAAGATGCTGACAGCCCCATTCGCAGGCCCCATT...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CGGAACTCTGACAGAGCCACCCCGGTGGCTACCGCCGGCTATAAAGACAGAGAGAGGTTCCAGTCTCCATaGGTGGTTTTACTCAACAAG +
Preference number: 4 (lower is better)
Translates to: RNSDRATPVATAGYKDRERFQSP*VVLLNK
Trigger: CTTGTTGAGTAAAACCACCCATGGAGACTGGAACCT...CTCTCTGTCTTTATAGCCGGCGGTAGCCACCGGGGTGGCTCTGTCAGAGTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGTTGCTGGTGGTTCTGTaGCCTCCGTGGGTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTLLVVL*PPWVKR
Trigger: TCTTTTCACCCACGGAGGGCACAGAACCACCAGCAA...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCCAGGACAAGAATCCCTaGAAAGGTGTCCTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGAQDKNP*KGVLAD
Trigger: GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTG...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGTTCTCGTTGTGCATTTaGGCGTACACGGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTFSLCI*AYTVLP
Trigger: AGGCAGGACCGTGTACGCCCAAATGCACAACGAGAA...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTAGCTGCTCAGCACCTGTaGCTGTGTCCCGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILAAQHL*LCPAGP
Trigger: TGGCCCTGCGGGACACAGGCACAGGTGCTGAGCAGC...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTGGATGGGAGAACGTCTaGACTGTCATTCGGATTCAC +
Preference number: 4 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTGWENV*TVIRIH
Trigger: GTGAATCCGAATGACAGTGCAGACGTTCTCCCATCC...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGTTCTCGGAGCAATTGTaGATTGCGCAGGTGACGTAC +
Preference number: 4 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTFSEQL*IAQVTY
Trigger: GTACGTCACCTGCGCAATCCACAATTGCTCCGAGAA...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAGCCAGGTTCCAGTCTCCATaGGTGGTTTTACTCAACAAG +
Preference number: 4 (lower is better)
Translates to: QTWWMGERLHCHSDSPPARFQSP*VVLLNK
Trigger: CTTGTTGAGTAAAACCACCCATGGAGACTGGAACCT...GGCTGGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTAGCCTGCCGTGTTCTCTaGCCTGACGGACACGCGGTA +
Preference number: 4 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILACRVL*PDGHAV
Trigger: TACCGCGTGTCCGTCAGGGCAGAGAACACGGCAGGC...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTGCAAAGGTGTCCTTGCAGACCCTGAACATCAGATATaGAGACCCTCGAATTTACAA +
Preference number: 4 (lower is better)
Translates to: CGWGGQQDKNPCKGVLADPEHQI*RPSNLQ
Trigger: TTGTAAATTCGAGGGTCTGCATATCTGATGTTCAGG...GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGGATCTGCAGATCCTTTaGCAATGCATACTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTDLQIL*QCILRQ
Trigger: CTGCCGAAGTATGCATTGCCAAAGGATCTGCAGATC...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCCTATATTCCTATAGACTTACACTAACATCCCTGATTCTAGGAAACCGTAAGTGCAGCCCGAGGTACTaGGAGGGCTCCAGGACGACC +
Preference number: 4 (lower is better)
Translates to: PLYSYRLTLTSLILGNRKCSPRY*EGSRTT
Trigger: GGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCA...CTTACGGTTTCCTAGAATCAGGGATGTTAGTGTAAGTCTATAGGAATATAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp AGCTCAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAAAACTGCAGAGGCATaGCTTGAAATTGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSDMVDGRTSALSFGFTPKTAEA*LEIDPA
Trigger: TGCTGGATCAATTTCAAGTCATGCCTCTGCAGTTTT...GGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CCCCTATATTCCTATAGACTTACACTAACATCCCTGATTCTAGGAAACCGTAAGTCCAGCCGCCGGCTTTaGTGGTGGTTCTGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PLYSYRLTLTSLILGNRKSSRRL*WWFCAL
Trigger: GAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGA...CTTACGGTTTCCTAGAATCAGGGATGTTAGTGTAAGTCTATAGGAATATAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTACTGGGGCGGTGTCCTTaGTGTGCACGGTGCCTGATA +
Preference number: 4 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILLGRCP*CARCLI
Trigger: TATCAGGCACCGTGCACACCAAGGACACCGCCCCAG...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp GAATGCATTGTCTCTTTGTTATGTGCATGGCAGCTGATGGCCTCGTTCCCAGGCTCCAGTCTCCATGGGTaGTTTTACTCAACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: ECIVSLLCAWQLMASFPGSSLHG*FYSTRS
Trigger: GCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGA...GCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTAGTCCCGGTCACTGAGTaGGGAGCTGACAAGGATGAC +
Preference number: 4 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILVPVTE*GADKDD
Trigger: GTCATCCTTGTCAGCTCCTCACTCAGTGACCGGGAC...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCGACCACAGTCTGACGTaGTGTACATTTCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGADHSLT*CTFLLY
Trigger: ATAAAGAAGAAATGTACATCACGTCAGACTGTGGTC...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp GAATGCATTGTCTCTTTGTTATGTGCATGGCAGCTGATGGCCTCGTTCCCAGGCCAGATCCTTTGGCAATaGATACTTCGGCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: ECIVSLLCAWQLMASFPGQILWQ*ILRQLH
Trigger: ATGAAGCTGCCGAAGTATGCATTGCCAAAGGATCTG...GCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTACACCTCCTTCCCAGGTaGTTGGGTCCACATGCCCAA +
Preference number: 4 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILHLLPR*LGPHAQ
Trigger: TTGGGCATGTGGACCCAAGCACCTGGGAAGGAGGTG...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp CCCCTATATTCCTATAGACTTACACTAACATCCCTGATTCTAGGAAACCGTAAGGCACTGTTTGGGGCGTaGAGATTCACCCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PLYSYRLTLTSLILGNRKALFGA*RFTPGL
Trigger: AAGCCCAGGGGTGAATCTTCACGCCCCAAACAGTGC...CTTACGGTTTCCTAGAATCAGGGATGTTAGTGTAAGTCTATAGGAATATAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTAAATGGGGCCTGCGAATaGGGCTGTCAGCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILNGACE*GCQHLL
Trigger: GAGAAGATGCTGACAGCCCCATTCGCAGGCCCCATT...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTAATTTATCAGAGGGGGTaGTGCCTGTCGCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILIYQRG*CLSPGV
Trigger: CACACCAGGCGACAGGCACCACCCCCTCTGATAAAT...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCCTATATTCCTATAGACTTACACTAACATCCCTGATTCTAGGAAACCGTAAGAGAACAGCCATCAGGTaGGAGAAGCCTGCGGGATGG +
Preference number: 4 (lower is better)
Translates to: PLYSYRLTLTSLILGNRKRTAIR*EKPAGW
Trigger: CCATCCCGCAGGCTTCTCCCACCTGATGGCTGTTCT...CTTACGGTTTCCTAGAATCAGGGATGTTAGTGTAAGTCTATAGGAATATAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCCTATATTCCTATAGACTTACACTAACATCCCTGATTCTAGGAAACCGTAAGCTTTCTGGGGGCATCTaGCTCCTTCCAGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PLYSYRLTLTSLILGNRKLSGGI*LLPEPR
Trigger: TCTGGGCTCTGGAAGGAGCCAGATGCCCCCAGAAAG...CTTACGGTTTCCTAGAATCAGGGATGTTAGTGTAAGTCTATAGGAATATAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTATGTGGATTGCGCAGGTaGCGTACCGAAAATCTCCAC +
Preference number: 4 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILCGLRR*RTENLH
Trigger: GTGGAGATTTTCGGTACGTCACCTGCGCAATCCACA...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR TCA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTTTTTGTCTGGTTTGCTaGTGTTGCCTTAAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTFCLVC*CCLKED
Trigger: ATCTTCTTTAAGGCAACATCAGCAAACCAGACAAAA...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCCTATATTCCTATAGACTTACACTAACATCCCTGATTCTAGGAAACCGTAAGGAGCGGAAGCTGATGTaGCCAAAGACCGTCATGACC +
Preference number: 4 (lower is better)
Translates to: PLYSYRLTLTSLILGNRKERKLM*PKTVMT
Trigger: GGTCATGACGGTCTTTGGCCACATCAGCTTCCGCTC...CTTACGGTTTCCTAGAATCAGGGATGTTAGTGTAAGTCTATAGGAATATAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTAGTCAGGCGGGGACAATaGGTTAAACCAGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILVRRGQ*VKPEVG
Trigger: GCCAACTTCTGGTTTAACCCATTGTCCCCGCCTGAC...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTACAAGCTCAGACATGGTaGATGGGAGAACGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILQAQTW*MGERLH
Trigger: GTGCAGACGTTCTCCCATCCACCATGTCTGAGCTTG...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp CCCCTATATTCCTATAGACTTACACTAACATCCCTGATTCTAGGAAACCGTAAGTGCTCCTTCTCGTTGTaGATTTGGGCGTACACGGTC +
Preference number: 4 (lower is better)
Translates to: PLYSYRLTLTSLILGNRKCSFSL*IWAYTV
Trigger: GACCGTGTACGCCCAAATGCACAACGAGAAGGAGCA...CTTACGGTTTCCTAGAATCAGGGATGTTAGTGTAAGTCTATAGGAATATAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR GCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTAGGATGGGAGAACGTCTaGACTGTCATTCGGATTCAC +
Preference number: 4 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILGWENV*TVIRIH
Trigger: GTGAATCCGAATGACAGTGCAGACGTTCTCCCATCC...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTAGGAACTGCAGAAAACTaGTACATCTGGTGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILGTAEN*YIWCRL
Trigger: GAGACGGCACCAGATGTACCAGTTTTCTGCAGTTCC...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTATCTTTGTTATGTGCATaGCAGCTGATGGCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILSLLCA*QLMASF
Trigger: GAACGAGGCCATCAGCTGCCATGCACATAACAAAGA...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CCA 90 bp CCCCTATATTCCTATAGACTTACACTAACATCCCTGATTCTAGGAAACCGTAAGGCAGAGAGAATTAAATaGAGTGGTCAAGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PLYSYRLTLTSLILGNRKAERIK*SGQGRP
Trigger: TGGCCTTCCTTGACCACTCCATTTAATTCTCTCTGC...CTTACGGTTTCCTAGAATCAGGGATGTTAGTGTAAGTCTATAGGAATATAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 90 bp GTCGCGTCCCCCTTGAGCACGAACGACGTGCTGATGAGCGAGACCTaGGCCCGCGAAGCCACTCCGGCCAGCGGCGCCGCCCGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: VASPLSTNDVLMSET*AREATPASGAARSQ
Trigger: CTGGGAGCGGGCGGCGCCGCTGGCCGGAGTGGCTTCGCGGGCGCAGGTCTCGCTCATCAGCACGTCGTTCGTGCTCAAGGGGGACGCGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507866.6
CDS-3UTR CAA 90 bp GAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTCGGTCGCCCTGCAGGTaGGAGAGCTCCCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: EGAFRRSLRGASPAAGFARSPCR*ESSQEL
Trigger: CAGCTCCTGGGAGCTCTCCAACCTGCAGGGCGACCG...AGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GTGGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCACCACGCCTGAGTGGTaGCCCTGGACAGCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: VATTQGGGFPQVSEGRQSTTPEW*PWTAPW
Trigger: CCAGGGCGCTGTCCAGGGCAACCACTCAGGCGTGGT...GGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTGTCCAGCCGCCGGCTTaGCTGGTGGTTCTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: QGGGFPQVSEGRQSSRRLVQPPA*LVVLCP
Trigger: AGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGAC...AAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CAA 90 bp CTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCACGGGTCTGCAGCTCTaGCAGCCCGAGGTACTGGGA +
Preference number: 5 (lower is better)
Translates to: LREGAFRRSLRGASPAAGTGLQL*QPEVLG
Trigger: TCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGT...GCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CAA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATCGGTCGCCCTGCAGGTaGGAGAGCTCCCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHRSPCR*ESSQEL
Trigger: CAGCTCCTGGGAGCTCTCCAACCTGCAGGGCGACCG...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCGTCCAGCCGCCGGCTTaGCTGGTGGTTCTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCVQPPA*LVVLCP
Trigger: AGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGAC...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTCCCACCGGGCACTGTTaGGGGCGTGAAGATTCACCC +
Preference number: 5 (lower is better)
Translates to: QGGGFPQVSEGRQSSRRLPTGHC*GREDSP
Trigger: GGGTGAATCTTCACGCCCCAAACAGTGCCCGGTGGG...AAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp AGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCCATCCCAGGGTTCCATGTaGCCCGTGGGCCCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: SSCSPRYWEGSRTTSLSPSQGSM*PVGPGP
Trigger: AGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGA...TGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAAATCCCAGGGTTCCATGTaGCCCGTGGGCCCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: APVQPPALLVVLCPPWVKSQGSM*PVGPGP
Trigger: AGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGA...TTTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGCGGCACCCGGGTCAGTaGGGCGTGAGGACCCAGGCG +
Preference number: 5 (lower is better)
Translates to: ARNAVSERVCSSCSPRYWRHPGQ*GVRTQA
Trigger: CGCCTGGGTCCTCACGCCCAACTGACCCGGGTGCCG...CCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507866.6
CDS GCA 90 bp CGGAGGACCCTGGAGTCCTGCAGCACCGAGTTCCCACAGGCGGCCTaGACCGTCACACGCACGTCGCCCGTGTCCGAAAACCGCGTTGTC +
Preference number: 5 (lower is better)
Translates to: RRTLESCSTEFPQAA*TVTRTSPVSENRVV
Trigger: GACAACGCGGTTTTCGGACACGGGCGACGTGCGTGTGACGGTGCAGGCCGCCTGTGGGAACTCGGTGCTGCAGGACTCCAGGGTCCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATCCTGGGGCGGTGTCCTaGGTGTGCACGGTGCCTGAT +
Preference number: 5 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHPGAVS*VCTVPD
Trigger: ATCAGGCACCGTGCACACCAAGGACACCGCCCCAGG...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GTGGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCGGCCGGAAGTCCACCTaGACCAGCTCCCAATCGGAG +
Preference number: 5 (lower is better)
Translates to: VATTQGGGFPQVSEGRQSGRKST*TSSQSE
Trigger: CTCCGATTGGGAGCTGGTCAAGGTGGACTTCCGGCC...GGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCGTGAAGCTCCTCCCCTaGATGCACCAGGACGTGGAC +
Preference number: 5 (lower is better)
Translates to: GGPGLCGEGARNAVSERVVKLLP*MHQDVD
Trigger: GTCCACGTCCTGGTGCATCAAGGGGAGGAGCTTCAC...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAAAGGCCACCGCCTCGCCTaGAATGCTGACCTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: APVQPPALLVVLCPPWVKGHRLA*NADLQA
Trigger: GGCCTGCAGGTCAGCATTCAAGGCGAGGCGGTGGCC...TTTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCGTCCAGCCGCCGGCTTaGCTGGTGGTTCTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCAVQPPA*LVVLCP
Trigger: AGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGAC...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CAA 90 bp GTGGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCCCCACCGGGCACTGTTaGGGGCGTGAAGATTCACCC +
Preference number: 5 (lower is better)
Translates to: VATTQGGGFPQVSEGRQSPTGHC*GREDSP
Trigger: GGGTGAATCTTCACGCCCCAAACAGTGCCCGGTGGG...GGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS TCA 90 bp GGACAAAGAGCACCGCCTCATCGTGGCCTGCCGTGTTCTCTGCCCTaGCGGACACGCGGTAGATGCCGGGGCTCTCGTAGCGGTGCCGGA +
Preference number: 5 (lower is better)
Translates to: GQRAPPHRGLPCSLP*RTRGRCRGSRSGAG
Trigger: TCCGGCACCGCTACGAGAGCCCCGGCATCTACCGCGTGTCCGTCAGGGCAGAGAACACGGCAGGCCACGATGAGGCGGTGCTCTTTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAAACCTGGGGCGGTGTCCTaGGTGTGCACGGTGCCTGAT +
Preference number: 5 (lower is better)
Translates to: APVQPPALLVVLCPPWVKPGAVS*VCTVPD
Trigger: ATCAGGCACCGTGCACACCAAGGACACCGCCCCAGG...TTTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCGTGAAGCTCCTCCCCTaGATGCACCAGGACGTGGAC +
Preference number: 5 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCVKLLP*MHQDVD
Trigger: GTCCACGTCCTGGTGCATCAAGGGGAGGAGCTTCAC...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACGGGACGCTGGTCTCCTaGGAGAGCAGCCGGGTGACC +
Preference number: 5 (lower is better)
Translates to: GARNAVSERVCSSCSPRYGTLVS*ESSRVT
Trigger: GGTCACCCGGCTGCTCTCCAAGGAGACCAGCGTCCC...GTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCACGGGTCTGCAGCTCTaGCAGCCCGAGGTACTGGGA +
Preference number: 5 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCATGLQL*QPEVLG
Trigger: TCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGT...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS GCA 90 bp GACCTGGACAAAGAGCACCGCCTCATCGTGGCCTGCCGTGTTCTCTaGCCTGACGGACACGCGGTAGATGCCGGGGCTCTCGTAGCGGTG +
Preference number: 5 (lower is better)
Translates to: DLDKEHRLIVACRVL*PDGHAVDAGALVAV
Trigger: CACCGCTACGAGAGCCCCGGCATCTACCGCGTGTCCGTCAGGGCAGAGAACACGGCAGGCCACGATGAGGCGGTGCTCTTTGTCCAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGGGCCGGAAGTCCACCTaGACCAGCTCCCAATCGGAG +
Preference number: 5 (lower is better)
Translates to: LQLLQPEVLGGLQDDQPQGRKST*TSSQSE
Trigger: CTCCGATTGGGAGCTGGTCAAGGTGGACTTCCGGCC...CTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GGAGGCCCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTTGGCAGAGCACTTGTaGGTGCTGGACTCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: GGPGLCGEGARNAVSERVLAEHL*VLDSEE
Trigger: CTCCTCAGAGTCCAGCACCAACAAGTGCTCTGCCAA...GACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGGGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTCCACCCTCACACACGTaGGACACCACTTTCCGGTAC +
Preference number: 5 (lower is better)
Translates to: EGAFRRSLRGASPAAGFAPPSHT*DTTFRY
Trigger: GTACCGGAAAGTGGTGTCCAACGTGTGTGAGGGTGG...AGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCGGGACGCTGGTCTCCTaGGAGAGCAGCCGGGTGACC +
Preference number: 5 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLGTLVS*ESSRVT
Trigger: GGTCACCCGGCTGCTCTCCAAGGAGACCAGCGTCCC...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTGCATCTCTCGGGAGTaGATGCTCAGGACCACGCCT +
Preference number: 5 (lower is better)
Translates to: PGLCGEGARNAVSERVCSCISRE*MLRTTP
Trigger: AGGCGTGGTCCTGAGCATCAACTCCCGAGAGATGCA...GCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CAA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCGCGGGATGGTGCTGCTaGCTGGTAGGAGTGAGGAAC +
Preference number: 5 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCAAGWCC*LVGVRN
Trigger: GTTCCTCACTCCTACCAGCAAGCAGCACCATCCCGC...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCCTCCTTCCCAGGTGCTaGGGTCCACATGCCCAACAT +
Preference number: 5 (lower is better)
Translates to: PGLCGEGARNAVSERVCSLLPRC*GPHAQH
Trigger: ATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGAG...GCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCACCACGCCTGAGTGGTaGCCTAGAGTCTGCGAGTCG +
Preference number: 5 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCATTPEW*PRVCES
Trigger: CGACTCGCAGACTCTAGGCAACCACTCAGGCGTGGT...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505529.1
CDS CCA 90 bp CGGCGAGCCTCTTATCACTCGAGAGGCTCCTCTTCCTTGTGGGCCTaGGAGGGGGCAGGAGCACGTACAGATCGGCCAAAGTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RRASYHSRGSSSLWA*EGAGARTDRPKWAA
Trigger: GGCTGCCCACTTTGGCCGATCTGTACGTGCTCCTGCCCCCTCCCAGGCCCACAAGGAAGAGGAGCCTCTCGAGTGATAAGAGGCTCGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGGCAGTCTGGAGGCTaGCAGTTGGTTGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: QGGGFPQVSEGRQSSRRLWQSGG*QLVGFP
Trigger: TGGAAAACCAACCAACTGCAAGCCTCCAGACTGCCA...AAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCGGGTTAAACCAGAAGTaGGCAGAGCACTTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: LREGAFRRSLRGASPAAGGLNQK*AEHLLV
Trigger: CACCAACAAGTGCTCTGCCAACTTCTGGTTTAACCC...GCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GTGGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGGTTCACCTCCTGGTaGAGGCCAATGACAGGAACC +
Preference number: 5 (lower is better)
Translates to: VATTQGGGFPQVSEGRQSRFTSW*RPMTGT
Trigger: GGTTCCTGTCATTGGCCTCAACCAGGAGGTGAACCT...GGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTGTCCGAAAACCGCGTaGTCACAGAATTATCCAGGG +
Preference number: 5 (lower is better)
Translates to: LREGAFRRSLRGASPAAGCPKTA*SQNYPG
Trigger: CCCTGGATAATTCTGTGACAACGCGGTTTTCGGACA...GCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTTCTCGTTGTGCATTaGGGCGTACACGGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCALLVVH*GVHGPA
Trigger: GGCAGGACCGTGTACGCCCAAATGCACAACGAGAAG...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CAA 90 bp AGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCACTTCTCGTTGTGCATTaGGGCGTACACGGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: SSQGSMLPVGPGPALCSPLLVVH*GVHGPA
Trigger: GGCAGGACCGTGTACGCCCAAATGCACAACGAGAAG...TGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTCCTGCTCCTTCTCGTaGTGCATTTGGGCGTACACG +
Preference number: 5 (lower is better)
Translates to: GFPQVSEGRQSSRRLCWWSCSFS*CIWAYT
Trigger: CGTGTACGCCCAAATGCACAACGAGAAGGAGCAGGA...CCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CAA 90 bp GGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAATGCATCTCTCGGGAGTaGATGCTCAGGACCACGCCT +
Preference number: 5 (lower is better)
Translates to: GASPAAGFAGGSVPSVGECISRE*MLRTTP
Trigger: AGGCGTGGTCCTGAGCATCAACTCCCGAGAGATGCA...TTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CAA 90 bp CCCCGTGGGCCTGGGCGGGCTTGGATTTATCAGAGGGGGTGGTGCCTGTCGCCTTGCATCTCTCGGGAGTaGATGCTCAGGACCACGCCT +
Preference number: 5 (lower is better)
Translates to: PRGPGRAWIYQRGWCLSPCISRE*MLRTTP
Trigger: AGGCGTGGTCCTGAGCATCAACTCCCGAGAGATGCA...AGGCGACAGGCACCACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCACGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CAA 90 bp GGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTGCGGGATGGTGCTGCTaGCTGGTAGGAGTGAGGAAC +
Preference number: 5 (lower is better)
Translates to: GLCGEGARNAVSERVCSSAGWCC*LVGVRN
Trigger: GTTCCTCACTCCTACCAGCAAGCAGCACCATCCCGC...AGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAACCTGCAAAGGTGTCCTaGCAGACTGCAAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GASPAAGFAGGSVPSVGEPAKVS*QTASRG
Trigger: TCCCCTGCTTGCAGTCTGCAAGGACACCTTTGCAGG...TTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAACTCCTTCCCAGGTGCTaGGGTCCACATGCCCAACAT +
Preference number: 5 (lower is better)
Translates to: GASPAAGFAGGSVPSVGELLPRC*GPHAQH
Trigger: ATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGAG...TTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGCAGAACACGTGGTCTTaGGTCACTCGCTCTTGCAGA +
Preference number: 5 (lower is better)
Translates to: GFPQVSEGRQSSRRLCWWQNTWS*VTRSCR
Trigger: TCTGCAAGAGCGAGTGACCAAAGACCACGTGTTCTG...CCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCATCTTCTCGGAGCAATaGTGGATTGCGCAGGTGACG +
Preference number: 5 (lower is better)
Translates to: PGLCGEGARNAVSERVCSIFSEQ*WIAQVT
Trigger: CGTCACCTGCGCAATCCACAATTGCTCCGAGAAGAT...GCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTGAAACCACCCTCACACACGTaGGACACCACTTTCCGGTAC +
Preference number: 5 (lower is better)
Translates to: APVQPPALLVVLCPPWVKPPSHT*DTTFRY
Trigger: GTACCGGAAAGTGGTGTCCAACGTGTGTGAGGGTGG...TTTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CCCGGCCTCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCAGGTCTACCTGGTACTaGGTAGTCAGGACATCACCC +
Preference number: 5 (lower is better)
Translates to: PGLCGEGARNAVSERVCSRSTWY*VVRTSP
Trigger: GGGTGATGTCCTGACTACCAAGTACCAGGTAGACCT...GCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGAGGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCTCCTGCTCCTTCTCGTaGTGCATTTGGGCGTACACG +
Preference number: 5 (lower is better)
Translates to: QVSEGRQSSRRLCWWFCASCSFS*CIWAYT
Trigger: CGTGTACGCCCAAATGCACAACGAGAAGGAGCAGGA...GGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CAA 90 bp TGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTGCAAAGGTGTCCTTGCAGACACCACGCCTGAGTGGTaGCCCTGGACAGCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: CGWGGQQDKNPCKGVLADTTPEW*PWTAPW
Trigger: CCAGGGCGCTGTCCAGGGCAACCACTCAGGCGTGGT...GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CTGGTACATCTGGTGCCGTCTCCACCACCCACCTTTCTGGGGGCATCTGGCTCCTGGGCCTGGGCGGGCTaGGATTTATCAGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: LVHLVPSPPPTFLGASGSWAWAG*DLSEGV
Trigger: CACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCA...GGAGCCAGATGCCCCCAGAAAGGTGGGTGGTGGAGACGGCACCAGATGTACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp AGGCACTGTGAGCTAAGGGGGAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGTGGGCCTGGGCGGGCTaGGATTTATCAGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: RHCELRGRAVPRVPCCPWWAWAG*DLSEGV
Trigger: CACCCCCTCTGATAAATCCAAGCCCGCCCAGGCCCA...CCACGGGCAACATGGAACCCTGGGAACTGCCCTCCCCCTTAGCTCACAGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCATCTCCAGGATGACCTaGAGGACAACTTGTAGGGTG +
Preference number: 5 (lower is better)
Translates to: GGGFPQVSEGRQSSRRLCISRMT*RTTCRV
Trigger: CACCCTACAAGTTGTCCTCAAGGTCATCCTGGAGAT...GCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS TCA 90 bp TGGGGTGGCATCAGCTCACCAGGTAGCTGTGCATCTCTCGGGAGTTaGTGCTCAGGACCACGCCTGAGTGGTTGCCCTGGACAGCGCCCT +
Preference number: 5 (lower is better)
Translates to: WGGISSPGSCASLGS*CSGPRLSGCPGQRP
Trigger: AGGGCGCTGTCCAGGGCAACCACTCAGGCGTGGTCCTGAGCATCAACTCCCGAGAGATGCACAGCTACCTGGTGAGCTGATGCCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 90 bp CACCAGGACCCGGACTCCGCCTCGCAGGAGGAAGCTGATCTTCTGTaGGTTCAGCACCTGCTGGATGGCGGCGAGCCTCTTATCACTCGA +
Preference number: 5 (lower is better)
Translates to: HQDPDSASQEEADLL*VQHLLDGGEPLITR
Trigger: TCGAGTGATAAGAGGCTCGCCGCCATCCAGCAGGTGCTGAACGCACAGAAGATCAGCTTCCTCCTGCGAGGCGGAGTCCGGGTCCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTTGTCCGAAAACCGCGTaGTCACAGAATTATCCAGGG +
Preference number: 5 (lower is better)
Translates to: EGAFRRSLRGASPAAGFACPKTA*SQNYPG
Trigger: CCCTGGATAATTCTGTGACAACGCGGTTTTCGGACA...AGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp TCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGCTTCTCGTTGTGCATTaGGGCGTACACGGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: SERVCSSCSPRYWEGSRTLLVVH*GVHGPA
Trigger: GGCAGGACCGTGTACGCCCAAATGCACAACGAGAAG...CGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS TCA 90 bp CAGTCCAGCCGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTaGAAAGACAGATGCTGGGGTGGCATCAGCTCACCAGGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: QSSRRLCWWFCALRG*KDRCWGGISSPGSC
Trigger: ACAGCTACCTGGTGAGCTGATGCCACCCCAGCATCTGTCTTTTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCGGCTGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS-3UTR CAA 90 bp AGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGCCCACAGAACACGTGGTCTTaGGTCACTCGCTCTTGCAGA +
Preference number: 5 (lower is better)
Translates to: SSCSPRYWEGSRTTSLSPQNTWS*VTRSCR
Trigger: TCTGCAAGAGCGAGTGACCAAAGACCACGTGTTCTG...TGGGCTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTGAGGCTTGCAGTTGGTaGGTTTTCCATTCATGTCCA +
Preference number: 5 (lower is better)
Translates to: EGAFRRSLRGASPAAGFAEACSW*VFHSCP
Trigger: TGGACATGAATGGAAAACCAACCAACTGCAAGCCTC...AGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCTGGAGGCTTGCAGTaGGTTGGTTTTCCATTCATG +
Preference number: 5 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCSGGLQ*VGFPFM
Trigger: CATGAATGGAAAACCAACCAACTGCAAGCCTCCAGA...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTTGCTTCGTCCACACTGAACTaGAGGATCTTCAAAGGGATG +
Preference number: 5 (lower is better)
Translates to: EGAFRRSLRGASPAAGFASSTLN*RIFKGM
Trigger: CATCCCTTTGAAGATCCTCAAGTTCAGTGTGGACGA...AGCAAAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCCCTGCAAAGGTGTCCTaGCAGACTGCAAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLPAKVS*QTASRG
Trigger: TCCCCTGCTTGCAGTCTGCAAGGACACCTTTGCAGG...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCAGCCGCCGGCTTGAATGCATTGTCTCTTaGTTATGTGCATGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: QGGGFPQVSEGRQSSRRLECIVS*LCAWQL
Trigger: CAGCTGCCATGCACATAACAAAGAGACAATGCATTC...AAGCCGGCGGCTGGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 90 bp GAAGCTGATGTGGCCAAAGACCGTCATGACCAGCGTCTCGTCCCCTaGCTCACTCAGCAGCCCGTCCACAAACACCGAGGTGCTGGTGAA +
Preference number: 5 (lower is better)
Translates to: EADVAKDRHDQRLVP*LTQQPVHKHRGAGE
Trigger: TTCACCAGCACCTCGGTGTTTGTGGACGGGCTGCTGAGTGAGCCAGGGGACGAGACGCTGGTCATGACGGTCTTTGGCCACATCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GAGGGCAGTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTTTGGTCACTCGCTCTaGCAGAAGTGTCCACTTTTT +
Preference number: 5 (lower is better)
Translates to: EGSSQGSMLPVGPGPALCFGHSL*QKCPLF
Trigger: AAAAAGTGGACACTTCTGCAAGAGCGAGTGACCAAA...GCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAACTGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGAGGTCTACCTGGTACTaGGTAGTCAGGACATCACCC +
Preference number: 5 (lower is better)
Translates to: ARNAVSERVCSSCSPRYWRSTWY*VVRTSP
Trigger: GGGTGATGTCCTGACTACCAAGTACCAGGTAGACCT...CCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GGCCCACGCCTGGATCTCCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCTCCTGCTCCTTCTCGTaGTGCATTTGGGCGTACACG +
Preference number: 5 (lower is better)
Translates to: GPRLDLHGCTDGNVSGCLSCSFS*CIWAYT
Trigger: CGTGTACGCCCAAATGCACAACGAGAAGGAGCAGGA...GAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGGAGATCCAGGCGTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS TCA 90 bp TGGGGTGGCATCAGCTCACCAGGTAGCTGTGCATCTCTCGGGAGTTaGTGCTCAGGACCACGCCTGAGTGGTTGCCTAGAGTCTGCGAGT +
Preference number: 5 (lower is better)
Translates to: WGGISSPGSCASLGS*CSGPRLSGCLESAS
Trigger: ACTCGCAGACTCTAGGCAACCACTCAGGCGTGGTCCTGAGCATCAACTCCCGAGAGATGCACAGCTACCTGGTGAGCTGATGCCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505529.1
CDS CCA 90 bp ATCGTCCTGCACGGTCAGAGACCCGTGGTCAATGGGGCCTGCGAATaGGGCTGTCAGCATCTTCTCGGAGCAATTGTGGATTGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: IVLHGQRPVVNGACE*GCQHLLGAIVDCAG
Trigger: ACCTGCGCAATCCACAATTGCTCCGAGAAGATGCTGACAGCCCCATTCGCAGGCCCCATTGACCACGGGTCTCTGACCGTGCAGGACGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 90 bp GCTGGTGTAGGTCTGGCCCAGGGCACAGTCGTCAGGCGGGGACAATaGGTTAAACCAGAAGTTGGCAGAGCACTTGTTGGTGCTGGACTC +
Preference number: 5 (lower is better)
Translates to: AGVGLAQGTVVRRGQ*VKPEVGRALVGAGL
Trigger: GAGTCCAGCACCAACAAGTGCTCTGCCAACTTCTGGTTTAACCCATTGTCCCCGCCTGACGACTGTGCCCTGGGCCAGACCTACACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GTGGCGACGACTCAGGGAGGGGGCTTTCCGCAGGTCTCTGAGGGGCGCCAGTCCTTTCCCATCAATTTTTaGGTTTGCCAGGAAGACTCC +
Preference number: 5 (lower is better)
Translates to: VATTQGGGFPQVSEGRQSFPINF*VCQEDS
Trigger: GGAGTCTTCCTGGCAAACCAAAAAATTGATGGGAAA...GGACTGGCGCCCCTCAGAGACCTGCGGAAAGCCCCCTCCCTGAGTCGTCGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CTGCAGCTCTTGCAGCCCGAGGTACTGGGAGGGCTCCAGGACGACCAGCCTCAGTCTGGAGGCTTGCAGTaGGTTGGTTTTCCATTCATG +
Preference number: 5 (lower is better)
Translates to: LQLLQPEVLGGLQDDQPQSGGLQ*VGFPFM
Trigger: CATGAATGGAAAACCAACCAACTGCAAGCCTCCAGA...CTGAGGCTGGTCGTCCTGGAGCCCTCCCAGTACCTCGGGCTGCAAGAGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp TCTGCGGGGAAGGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCATGGCAGTCTGGAGGCTaGCAGTTGGTTGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: SAGKEPATQCLNGSAALAWQSGG*QLVGFP
Trigger: TGGAAAACCAACCAACTGCAAGCCTCCAGACTGCCA...TGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCCTTCCCCGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGGGGGTTAAACCAGAAGTaGGCAGAGCACTTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PATQCLNGSAALAARGTGGLNQK*AEHLLV
Trigger: CACCAACAAGTGCTCTGCCAACTTCTGGTTTAACCC...CCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTGGCTGCAGAGGCATGACTaGAAATTGATCCAGCACACG +
Preference number: 5 (lower is better)
Translates to: ARNAVSERVCSSCSPRYWLQRHD*KLIQHT
Trigger: CGTGTGCTGGATCAATTTCAAGTCATGCCTCTGCAG...CCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GGCAGAGGAGACACCCTGGGCACTCAGGGAAAGGGGCTCCCGAGTACGGAACTCATCTCCAGGATGACCTaGAGGACAACTTGTAGGGTG +
Preference number: 5 (lower is better)
Translates to: GRGDTLGTQGKGLPSTELISRMT*RTTCRV
Trigger: CACCCTACAAGTTGTCCTCAAGGTCATCCTGGAGAT...GAGTTCCGTACTCGGGAGCCCCTTTCCCTGAGTGCCCAGGGTGTCTCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTTGCGTCGCGTCCCCCTaGAGCACGAACGACGTGCTG +
Preference number: 5 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTCVASP*STNDVL
Trigger: CAGCACGTCGTTCGTGCTCAAGGGGGACGCGACGCA...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507866.6
CDS GCA 90 bp CCCTTGATGCACCAGGACGTGGACTTTCTTTTCCGGAAACTTCTCTaGTGGCCCATGATACAGCGGTCGCCCTGCAGGTTGGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: PLMHQDVDFLFRKLL*WPMIQRSPCRLESS
Trigger: GGAGCTCTCCAACCTGCAGGGCGACCGCTGTATCATGGGCCAGCAGAGAAGTTTCCGGAAAAGAAAGTCCACGTCCTGGTGCATCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 90 bp GCCTGGCCGTTTCCTGATGAAATTGTAGAGGATGAAGGCTCCCGCTaGGAAGAGCCCGATGACAAACAGCACCACTACCGCCCAGTAGCC +
Preference number: 5 (lower is better)
Translates to: AWPFPDEIVEDEGSR*EEPDDKQHHYRPVA
Trigger: GGCTACTGGGCGGTAGTGGTGCTGTTTGTCATCGGGCTCTTCGCAGCGGGAGCCTTCATCCTCTACAATTTCATCAGGAAACGGCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329016.10
CDS-3UTR CAA 90 bp GGAGATGAGGTTCCAGTCTCCATGGGTGGTTTTACTCAACAAGGAGCGGGTGCCGGGATGGAGGTGTCTTaGATGGCCACGATCACGCCG +
Preference number: 5 (lower is better)
Translates to: GDEVPVSMGGFTQQGAGAGMEVS*MATITP
Trigger: CGGCGTGATCGTGGCCATCAAAGACACCTCCATCCC...GGCACCCGCTCCTTGTTGAGTAAAACCACCCATGGAGACTGGAACCTCATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GGAGCCCGCAACGCAGTGTCTGAACGGGTCTGCAGCTCTTGCAGCCCGAGGTACTCGTCCACACTGAACTaGAGGATCTTCAAAGGGATG +
Preference number: 5 (lower is better)
Translates to: GARNAVSERVCSSCSPRYSSTLN*RIFKGM
Trigger: CATCCCTTTGAAGATCCTCAAGTTCAGTGTGGACGA...GTACCTCGGGCTGCAAGAGCTGCAGACCCGTTCAGACACTGCGTTGCGGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp TGTGGGTGGGGTGGCCAGCAGGACAAGAATCCCTGCAAAGGTGTCCTTGCAGACTTGGCAGAGCACTTGTaGGTGCTGGACTCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: CGWGGQQDKNPCKGVLADLAEHL*VLDSEE
Trigger: CTCCTCAGAGTCCAGCACCAACAAGTGCTCTGCCAA...GTCTGCAAGGACACCTTTGCAGGGATTCTTGTCCTGCTGGCCACCCCACCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CCATGGGTGCACAGACGGGAACGTATCAGGCTGTCTCAGATGCCACCTCCTTCCAGGTTCACCTCCTGGTaGAGGCCAATGACAGGAACC +
Preference number: 5 (lower is better)
Translates to: PWVHRRERIRLSQMPPPSRFTSW*RPMTGT
Trigger: GGTTCCTGTCATTGGCCTCAACCAGGAGGTGAACCT...GGAAGGAGGTGGCATCTGAGACAGCCTGATACGTTCCCGTCTGTGCACCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGACGGGTCTGCAGCTCTaGCAGCCCGAGGTACTGGGA +
Preference number: 5 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTTGLQL*QPEVLG
Trigger: TCCCAGTACCTCGGGCTGCAAGAGCTGCAGACCCGT...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 90 bp GCCTGCGAATGGGGCTGTCAGCATCTTCTCGGAGCAATTGTGGATTaGGCAGGTGACGTACCGAAAATCTCCACCGAGGTCTTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: ACEWGCQHLLGAIVD*AGDVPKISTEVLGF
Trigger: GAAGCCCAAGACCTCGGTGGAGATTTTCGGTACGTCACCTGCGCAATCCACAATTGCTCCGAGAAGATGCTGACAGCCCCATTCGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 90 bp GATGTAATCGTCCTGCACGGTCAGAGACCCGTGGTCAATGGGGCCTaGGAATGGGGCTGTCAGCATCTTCTCGGAGCAATTGTGGATTGC +
Preference number: 5 (lower is better)
Translates to: DVIVLHGQRPVVNGA*EWGCQHLLGAIVDC
Trigger: GCAATCCACAATTGCTCCGAGAAGATGCTGACAGCCCCATTCGCAGGCCCCATTGACCACGGGTCTCTGACCGTGCAGGACGATTACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 90 bp GGCAGTCTGGAGGCTTGCAGTTGGTTGGTTTTCCATTCATGTCCATaGTGGGTGGCCTCAGGTAATCCCAGTCGCGGCCCTTGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: GSLEACSWLVFHSCP*WVASGNPSRGPCCR
Trigger: CCTACAACAAGGGCCGCGACTGGGATTACCTGAGGCCACCCAGCATGGACATGAATGGAAAACCAACCAACTGCAAGCCTCCAGACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 90 bp TTGATGCACCAGGACGTGGACTTTCTTTTCCGGAAACTTCTCTGCTaGCCCATGATACAGCGGTCGCCCTGCAGGTTGGAGAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: LMHQDVDFLFRKLLC*PMIQRSPCRLESSQ
Trigger: CTGGGAGCTCTCCAACCTGCAGGGCGACCGCTGTATCATGGGCCAGCAGAGAAGTTTCCGGAAAAGAAAGTCCACGTCCTGGTGCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 90 bp AGGATCAAGATCACCTGCCTGTTTCCTCTGGAGACTCCACAGGCCTaGCCCAGAGAGGCTAGTGGAATGGAGAGCTTGGTGCCTGGTCAT +
Preference number: 5 (lower is better)
Translates to: RIKITCLFPLETPQA*PREASGMESLVPGH
Trigger: ATGACCAGGCACCAAGCTCTCCATTCCACTAGCCTCTCTGGGCCAGGCCTGTGGAGTCTCCAGAGGAAACAGGCAGGTGATCTTGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511199.1
CDS-3UTR CAA 90 bp GTTCCCAGGGTTCCATGTTGCCCGTGGGCCCCGGGCCTGCACTGTGCTCGCCATAAGAGACGTAGTATTTaGTCTGGTTTGCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: VPRVPCCPWAPGLHCARHKRRSI*SGLLML
Trigger: CAACATCAGCAAACCAGACAAAATACTACGTCTCTT...ATGGCGAGCACAGTGCAGGCCCGGGGCCCACGGGCAACATGGAACCCTGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS TCA 90 bp GGGTGGAAAATCAGAGTTTCCACGAAGAAGGGAATGGGCTGCTTCTaGAAGGTGGCGCCTTCGTCTGCGCTGAGGAATAGGCTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: GWKIRVSTKKGMGCF*KVAPSSALRNRLWS
Trigger: GGACCAGAGCCTATTCCTCAGCGCAGACGAAGGCGCCACCTTTCAGAAGCAGCCCATTCCCTTCTTCGTGGAAACTCTGATTTTCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000507866.6
ENST00000511199.1
CDS TCA 90 bp TGGGTTAAACCAGAAGTTGGCAGAGCACTTGTTGGTGCTGGACTCTaGGGAGGAGGAGCGCTCAAATCCGTAGTCGCACAGGAAGTCCGA +
Preference number: 5 (lower is better)
Translates to: WVKPEVGRALVGAGL*GGGALKSVVAQEVR
Trigger: TCGGACTTCCTGTGCGACTACGGATTTGAGCGCTCCTCCTCCTCAGAGTCCAGCACCAACAAGTGCTCTGCCAACTTCTGGTTTAACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GGCAGAGGAGACACCCTGGGCACTCAGGGAAAGGGGCTCCCGAGTACGGAACTCAAGAGACGTAGTATTTaGTCTGGTTTGCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: GRGDTLGTQGKGLPSTELKRRSI*SGLLML
Trigger: CAACATCAGCAAACCAGACAAAATACTACGTCTCTT...GAGTTCCGTACTCGGGAGCCCCTTTCCCTGAGTGCCCAGGGTGTCTCCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CAGACATGGTGGATGGGAGAACGTCTGCACTGTCATTCGGATTCACCCCCAGCCCTGCAGAGGCATGACTaGAAATTGATCCAGCACACG +
Preference number: 5 (lower is better)
Translates to: QTWWMGERLHCHSDSPPALQRHD*KLIQHT
Trigger: CGTGTGCTGGATCAATTTCAAGTCATGCCTCTGCAG...GGCTGGGGGTGAATCCGAATGACAGTGCAGACGTTCTCCCATCCACCATGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 90 bp AGTCTGGAGGCTTGCAGTTGGTTGGTTTTCCATTCATGTCCATGCTaGGTGGCCTCAGGTAATCCCAGTCGCGGCCCTTGTTGTAGGTTA +
Preference number: 5 (lower is better)
Translates to: SLEACSWLVFHSCPC*VASGNPSRGPCCRL
Trigger: TAACCTACAACAAGGGCCGCGACTGGGATTACCTGAGGCCACCCAGCATGGACATGAATGGAAAACCAACCAACTGCAAGCCTCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 90 bp TGGAGGCTTGCAGTTGGTTGGTTTTCCATTCATGTCCATGCTGGGTaGCCTCAGGTAATCCCAGTCGCGGCCCTTGTTGTAGGTTATAAG +
Preference number: 5 (lower is better)
Translates to: WRLAVGWFSIHVHAG*PQVIPVAALVVGYK
Trigger: CTTATAACCTACAACAAGGGCCGCGACTGGGATTACCTGAGGCCACCCAGCATGGACATGAATGGAAAACCAACCAACTGCAAGCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CCCCTATATTCCTATAGACTTACACTAACATCCCTGATTCTAGGAAACCGTAAGGGCCACCGCCTCGCCTaGAATGCTGACCTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: PLYSYRLTLTSLILGNRKGHRLA*NADLQA
Trigger: GGCCTGCAGGTCAGCATTCAAGGCGAGGCGGTGGCC...CTTACGGTTTCCTAGAATCAGGGATGTTAGTGTAAGTCTATAGGAATATAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp TCCTTCCCAGGTGCTTGGGTCCACATGCCCAACATGTTCTTAATAGAAATATTATGCACCATCGCCTGGTaGTGCGTCGCGTCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: SFPGAWVHMPNMFLIEILCTIAW*CVASPL
Trigger: CAAGGGGGACGCGACGCACAACCAGGCGATGGTGCA...TAATATTTCTATTAAGAACATGTTGGGCATGTGGACCCAAGCACCTGGGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507866.6
CDS-3UTR CAA 90 bp TCGTTCCCAGGCGCCCAGGTCTACCTGAACATCAGATATGCAGACCCTCGAATTGAGGCTTGCAGTTGGTaGGTTTTCCATTCATGTCCA +
Preference number: 5 (lower is better)
Translates to: SFPGAQVYLNIRYADPRIEACSW*VFHSCP
Trigger: TGGACATGAATGGAAAACCAACCAACTGCAAGCCTC...AATTCGAGGGTCTGCATATCTGATGTTCAGGTAGACCTGGGCGCCTGGGAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp TTAAATGGAGTGGTCAAGGAAGGCCAACGACCTAGAGTGGCTACCGCAGGCACTTTTGGTCACTCGCTCTaGCAGAAGTGTCCACTTTTT +
Preference number: 5 (lower is better)
Translates to: LNGVVKEGQRPRVATAGTFGHSL*QKCPLF
Trigger: AAAAAGTGGACACTTCTGCAAGAGCGAGTGACCAAA...AGTGCCTGCGGTAGCCACTCTAGGTCGTTGGCCTTCCTTGACCACTCCATTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp ACATCAGATATGCAGACCCTCGAATTTACAACCAGGGACAGACACGGGCCCACGGAATGCATTGTCTCTTaGTTATGTGCATGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: TSDMQTLEFTTRDRHGPTECIVS*LCAWQL
Trigger: CAGCTGCCATGCACATAACAAAGAGACAATGCATTC...CGTGGGCCCGTGTCTGTCCCTGGTTGTAAATTCGAGGGTCTGCATATCTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp CCCCTATATTCCTATAGACTTACACTAACATCCCTGATTCTAGGAAACCGTAAGGGGATGGAGGTGTCTTaGATGGCCACGATCACGCCG +
Preference number: 5 (lower is better)
Translates to: PLYSYRLTLTSLILGNRKGMEVS*MATITP
Trigger: CGGCGTGATCGTGGCCATCAAAGACACCTCCATCCC...CTTACGGTTTCCTAGAATCAGGGATGTTAGTGTAAGTCTATAGGAATATAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS-3UTR CAA 90 bp GAATGCATTGTCTCTTTGTTATGTGCATGGCAGCTGATGGCCTCGTTCCCAGGCTTTCCCATCAATTTTTaGGTTTGCCAGGAAGACTCC +
Preference number: 5 (lower is better)
Translates to: ECIVSLLCAWQLMASFPGFPINF*VCQEDS
Trigger: GGAGTCTTCCTGGCAAACCAAAAAATTGATGGGAAA...GCCTGGGAACGAGGCCATCAGCTGCCATGCACATAACAAAGAGACAATGCATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS TCA 72 bp ACGTCCTCTCCAGGCCGCACGGCCACCGCCTCGCCTTaGATGCTGACCTGCAGGCCCCGGGGCGGCGTGAGG +
Preference number: 6 (lower is better)
Translates to: TSSPGRTATASP*MLTCRPRGGVR
Trigger: CCTCACGCCGCCCCGGGGCCTGCAGGTCAGCATTCAAGGCGAGGCGGTGGCCGTGCGGCCTGGAGAGGACGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 72 bp GACGTCCTCTCCAGGCCGCACGGCCACCGCCTCGCCTaGAATGCTGACCTGCAGGCCCCGGGGCGGCGTGAG +
Preference number: 6 (lower is better)
Translates to: DVLSRPHGHRLA*NADLQAPGRRE
Trigger: CTCACGCCGCCCCGGGGCCTGCAGGTCAGCATTCAAGGCGAGGCGGTGGCCGTGCGGCCTGGAGAGGACGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 72 bp CCCTTGAGCACGAACGACGTGCTGATGAGCGAGACCTaGGCCCGCGAAGCCACTCCGGCCAGCGGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: PLSTNDVLMSET*AREATPASGAA
Trigger: GGCGGCGCCGCTGGCCGGAGTGGCTTCGCGGGCGCAGGTCTCGCTCATCAGCACGTCGTTCGTGCTCAAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507866.6
CDS TCA 72 bp GCACCGCCTCATCGTGGCCTGCCGTGTTCTCTGCCCTaGCGGACACGCGGTAGATGCCGGGGCTCTCGTAGC +
Preference number: 6 (lower is better)
Translates to: APPHRGLPCSLP*RTRGRCRGSRS
Trigger: GCTACGAGAGCCCCGGCATCTACCGCGTGTCCGTCAGGGCAGAGAACACGGCAGGCCACGATGAGGCGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 72 bp CTGGAGTCCTGCAGCACCGAGTTCCCACAGGCGGCCTaGACCGTCACACGCACGTCGCCCGTGTCCGAAAAC +
Preference number: 6 (lower is better)
Translates to: LESCSTEFPQAA*TVTRTSPVSEN
Trigger: GTTTTCGGACACGGGCGACGTGCGTGTGACGGTGCAGGCCGCCTGTGGGAACTCGGTGCTGCAGGACTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 72 bp AAAGAGCACCGCCTCATCGTGGCCTGCCGTGTTCTCTaGCCTGACGGACACGCGGTAGATGCCGGGGCTCTC +
Preference number: 6 (lower is better)
Translates to: KEHRLIVACRVL*PDGHAVDAGAL
Trigger: GAGAGCCCCGGCATCTACCGCGTGTCCGTCAGGGCAGAGAACACGGCAGGCCACGATGAGGCGGTGCTCTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 72 bp CACGTCCTGCAGCACCAGCGCGTAGCGCACGCCCCGTaGGTCCGACTGGTACAGGTTGTAGGTGTCCATCTG +
Preference number: 6 (lower is better)
Translates to: HVLQHQRVAHAP*VRLVQVVGVHL
Trigger: CAGATGGACACCTACAACCTGTACCAGTCGGACCCACGGGGCGTGCGCTACGCGCTGGTGCTGCAGGACGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 72 bp GGGGAGTTGACCTGGACAAAGAGCACCGCCTCATCGTaGCCTGCCGTGTTCTCTGCCCTGACGGACACGCGG +
Preference number: 6 (lower is better)
Translates to: GELTWTKSTASS*PAVFSALTDTR
Trigger: CCGCGTGTCCGTCAGGGCAGAGAACACGGCAGGCCACGATGAGGCGGTGCTCTTTGTCCAGGTCAACTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 72 bp CCGGACTCCGCCTCGCAGGAGGAAGCTGATCTTCTGTaGGTTCAGCACCTGCTGGATGGCGGCGAGCCTCTT +
Preference number: 6 (lower is better)
Translates to: PDSASQEEADLL*VQHLLDGGEPL
Trigger: AAGAGGCTCGCCGCCATCCAGCAGGTGCTGAACGCACAGAAGATCAGCTTCCTCCTGCGAGGCGGAGTCCGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 72 bp TGGGAGGGGGCAGGAGCACGTACAGATCGGCCAAAGTaGGCAGCCCCGGCTTCACCACAGTCACCAGAAGCT +
Preference number: 6 (lower is better)
Translates to: WEGAGARTDRPK*AAPASPQSPEA
Trigger: AGCTTCTGGTGACTGTGGTGAAGCCGGGGCTGCCCACTTTGGCCGATCTGTACGTGCTCCTGCCCCCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 90 bp CGGCCTGCACCGTCACACGCACGTCGCCCGTGTCCGAAAACCGCGTaGTCACAGAATTATCCAGGGAAAGGAGGGGCTGCAGGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: RPAPSHARRPCPKTA*SQNYPGKGGAAGCG
Trigger: GCCACAGCCTGCAGCCCCTCCTTTCCCTGGATAATTCTGTGACAACGCGGTTTTCGGACACGGGCGACGTGCGTGTGACGGTGCAGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 90 bp GCTGGATGGCGGCGAGCCTCTTATCACTCGAGAGGCTCCTCTTCCTaGTGGGCCTGGGAGGGGGCAGGAGCACGTACAGATCGGCCAAAG +
Preference number: 6 (lower is better)
Translates to: AGWRRASYHSRGSSS*WAWEGAGARTDRPK
Trigger: CTTTGGCCGATCTGTACGTGCTCCTGCCCCCTCCCAGGCCCACAAGGAAGAGGAGCCTCTCGAGTGATAAGAGGCTCGCCGCCATCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 90 bp TCCTCCTCGCCGCACTGCCTGGAGAATGAGGGCCGGAAGTCCACCTaGACCAGCTCCCAATCGGAGCGGAAGCTGATGTGGCCAAAGACC +
Preference number: 6 (lower is better)
Translates to: SSSPHCLENEGRKST*TSSQSERKLMWPKT
Trigger: GGTCTTTGGCCACATCAGCTTCCGCTCCGATTGGGAGCTGGTCAAGGTGGACTTCCGGCCCTCATTCTCCAGGCAGTGCGGCGAGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS TCA 72 bp GGAGCTGTAGTCCTCCTCGCCGCACTGCCTGGAGAATaGGGGCCGGAAGTCCACCTTGACCAGCTCCCAATC +
Preference number: 6 (lower is better)
Translates to: GAVVLLAALPGE*GPEVHLDQLPI
Trigger: GATTGGGAGCTGGTCAAGGTGGACTTCCGGCCCTCATTCTCCAGGCAGTGCGGCGAGGAGGACTACAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 72 bp GTGGCCAAAGACCGTCATGACCAGCGTCTCGTCCCCTaGCTCACTCAGCAGCCCGTCCACAAACACCGAGGT +
Preference number: 6 (lower is better)
Translates to: VAKDRHDQRLVP*LTQQPVHKHRG
Trigger: ACCTCGGTGTTTGTGGACGGGCTGCTGAGTGAGCCAGGGGACGAGACGCTGGTCATGACGGTCTTTGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 72 bp CCGCACTGCCTGGAGAATGAGGGCCGGAAGTCCACCTaGACCAGCTCCCAATCGGAGCGGAAGCTGATGTGG +
Preference number: 6 (lower is better)
Translates to: PHCLENEGRKST*TSSQSERKLMW
Trigger: CCACATCAGCTTCCGCTCCGATTGGGAGCTGGTCAAGGTGGACTTCCGGCCCTCATTCTCCAGGCAGTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS TCA 72 bp CGCCGGCTTTGCTGGTGGTTCTGTGCCCTCCGTGGGTaGAAAGACAGATGCTGGGGTGGCATCAGCTCACCA +
Preference number: 6 (lower is better)
Translates to: RRLCWWFCALRG*KDRCWGGISSP
Trigger: TGGTGAGCTGATGCCACCCCAGCATCTGTCTTTTCACCCACGGAGGGCACAGAACCACCAGCAAAGCCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS GCA 72 bp GTTGACCTGGACAAAGAGCACCGCCTCATCGTGGCCTaGCGTGTTCTCTGCCCTGACGGACACGCGGTAGAT +
Preference number: 6 (lower is better)
Translates to: VDLDKEHRLIVA*RVLCPDGHAVD
Trigger: ATCTACCGCGTGTCCGTCAGGGCAGAGAACACGGCAGGCCACGATGAGGCGGTGCTCTTTGTCCAGGTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 90 bp CACTCGCACACGCGGGACGTGAGCGCCGACGTGAAGCTCCTCCCCTaGATGCACCAGGACGTGGACTTTCTTTTCCGGAAACTTCTCTGC +
Preference number: 6 (lower is better)
Translates to: HSHTRDVSADVKLLP*MHQDVDFLFRKLLC
Trigger: GCAGAGAAGTTTCCGGAAAAGAAAGTCCACGTCCTGGTGCATCAAGGGGAGGAGCTTCACGTCGGCGCTCACGTCCCGCGTGTGCGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 90 bp CCCAGGGCACAGTCGTCAGGCGGGGACAATGGGTTAAACCAGAAGTaGGCAGAGCACTTGTTGGTGCTGGACTCTGAGGAGGAGGAGCGC +
Preference number: 6 (lower is better)
Translates to: PRAQSSGGDNGLNQK*AEHLLVLDSEEEER
Trigger: GCGCTCCTCCTCCTCAGAGTCCAGCACCAACAAGTGCTCTGCCAACTTCTGGTTTAACCCATTGTCCCCGCCTGACGACTGTGCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 72 bp GTCCTGCACGGTCAGAGACCCGTGGTCAATGGGGCCTaGGAATGGGGCTGTCAGCATCTTCTCGGAGCAATT +
Preference number: 6 (lower is better)
Translates to: VLHGQRPVVNGA*EWGCQHLLGAI
Trigger: AATTGCTCCGAGAAGATGCTGACAGCCCCATTCGCAGGCCCCATTGACCACGGGTCTCTGACCGTGCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 72 bp CTCACAGGGCTGGTCATCTCCTGCTCCTTCTCGTTGTaGATTTGGGCGTACACGGTCCTGCCTGGCCGTTTC +
Preference number: 6 (lower is better)
Translates to: LTGLVISCSFSL*IWAYTVLPGRF
Trigger: GAAACGGCCAGGCAGGACCGTGTACGCCCAAATGCACAACGAGAAGGAGCAGGAGATGACCAGCCCTGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000505529.1
ENST00000507866.6
CDS CCA 72 bp AAGGTGGCGCCTTCGTCTGCGCTGAGGAATAGGCTCTaGTCCCGGTCACTGAGTGAGGAGCTGACAAGGATG +
Preference number: 6 (lower is better)
Translates to: KVAPSSALRNRL*SRSLSEELTRM
Trigger: CATCCTTGTCAGCTCCTCACTCAGTGACCGGGACCAGAGCCTATTCCTCAGCGCAGACGAAGGCGCCACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000507866.6
ENST00000511199.1
CDS CCA 72 bp TGTAATCGTCCTGCACGGTCAGAGACCCGTGGTCAATaGGGCCTGCGAATGGGGCTGTCAGCATCTTCTCGG +
Preference number: 6 (lower is better)
Translates to: CNRPARSETRGQ*GLRMGLSASSR
Trigger: CCGAGAAGATGCTGACAGCCCCATTCGCAGGCCCCATTGACCACGGGTCTCTGACCGTGCAGGACGATTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 72 bp GACTCTGCTGCATGTCCACCCCACCCTCACACACGTTaGACACCACTTTCCGGTACCCAAGGCTGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: DSAACPPHPHTR*TPLSGTQGCWC
Trigger: ACACCAGCAGCCTTGGGTACCGGAAAGTGGTGTCCAACGTGTGTGAGGGTGGGGTGGACATGCAGCAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 72 bp ATGGCCTTGAAGCCGTCCCCAAGGTCTACCTGGTACTaGGTAGTCAGGACATCACCCTGCTCCTGCCGCACC +
Preference number: 6 (lower is better)
Translates to: MALKPSPRSTWY*VVRTSPCSCRT
Trigger: GGTGCGGCAGGAGCAGGGTGATGTCCTGACTACCAAGTACCAGGTAGACCTTGGGGACGGCTTCAAGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 72 bp CCGTCACACGCACGTCGCCCGTGTCCGAAAACCGCGTaGTCACAGAATTATCCAGGGAAAGGAGGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: PSHARRPCPKTA*SQNYPGKGGAA
Trigger: TGCAGCCCCTCCTTTCCCTGGATAATTCTGTGACAACGCGGTTTTCGGACACGGGCGACGTGCGTGTGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 90 bp TGCCGGATGGGCTCCCCGGTCAGTGTAAGGTTCACGTACATGGCCTaGAAGCCGTCCCCAAGGTCTACCTGGTACTTGGTAGTCAGGACA +
Preference number: 6 (lower is better)
Translates to: CRMGSPVSVRFTYMA*KPSPRSTWYLVVRT
Trigger: TGTCCTGACTACCAAGTACCAGGTAGACCTTGGGGACGGCTTCAAGGCCATGTACGTGAACCTTACACTGACCGGGGAGCCCATCCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 72 bp CACGGTCAGAGACCCGTGGTCAATGGGGCCTGCGAATaGGGCTGTCAGCATCTTCTCGGAGCAATTGTGGAT +
Preference number: 6 (lower is better)
Translates to: HGQRPVVNGACE*GCQHLLGAIVD
Trigger: ATCCACAATTGCTCCGAGAAGATGCTGACAGCCCCATTCGCAGGCCCCATTGACCACGGGTCTCTGACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 72 bp GGTCTGGCCCAGGGCACAGTCGTCAGGCGGGGACAATaGGTTAAACCAGAAGTTGGCAGAGCACTTGTTGGT +
Preference number: 6 (lower is better)
Translates to: GLAQGTVVRRGQ*VKPEVGRALVG
Trigger: ACCAACAAGTGCTCTGCCAACTTCTGGTTTAACCCATTGTCCCCGCCTGACGACTGTGCCCTGGGCCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 72 bp AGGAGGAAGCTGATCTTCTGTGCGTTCAGCACCTGCTaGATGGCGGCGAGCCTCTTATCACTCGAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: RRKLIFCAFSTC*MAASLLSLERL
Trigger: GAGCCTCTCGAGTGATAAGAGGCTCGCCGCCATCCAGCAGGTGCTGAACGCACAGAAGATCAGCTTCCTCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 72 bp AGGGCTGGTCATCTCCTGCTCCTTCTCGTTGTGCATTaGGGCGTACACGGTCCTGCCTGGCCGTTTCCTGAT +
Preference number: 6 (lower is better)
Translates to: RAGHLLLLLVVH*GVHGPAWPFPD
Trigger: ATCAGGAAACGGCCAGGCAGGACCGTGTACGCCCAAATGCACAACGAGAAGGAGCAGGAGATGACCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329016.10
CDS TCA 72 bp TGGACTTTCTTTTCCGGAAACTTCTCTGCTGGCCCATaGTACAGCGGTCGCCCTGCAGGTTGGAGAGCTCCC +
Preference number: 6 (lower is better)
Translates to: WTFFSGNFSAGP*YSGRPAGWRAP
Trigger: GGGAGCTCTCCAACCTGCAGGGCGACCGCTGTATCATGGGCCAGCAGAGAAGTTTCCGGAAAAGAAAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS TCA 72 bp CCAGAAGTTGGCAGAGCACTTGTTGGTGCTGGACTCTaGGGAGGAGGAGCGCTCAAATCCGTAGTCGCACAG +
Preference number: 6 (lower is better)
Translates to: PEVGRALVGAGL*GGGALKSVVAQ
Trigger: CTGTGCGACTACGGATTTGAGCGCTCCTCCTCCTCAGAGTCCAGCACCAACAAGTGCTCTGCCAACTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 72 bp GAGGCTTGCAGTTGGTTGGTTTTCCATTCATGTCCATaGTGGGTGGCCTCAGGTAATCCCAGTCGCGGCCCT +
Preference number: 6 (lower is better)
Translates to: EACSWLVFHSCP*WVASGNPSRGP
Trigger: AGGGCCGCGACTGGGATTACCTGAGGCCACCCAGCATGGACATGAATGGAAAACCAACCAACTGCAAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 72 bp CAGGTGCAGGTGGCAGTCTGGAGGCTTGCAGTTGGTTaGTTTTCCATTCATGTCCATGCTGGGTGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: QVQVAVWRLAVG*FSIHVHAGWPQ
Trigger: CTGAGGCCACCCAGCATGGACATGAATGGAAAACCAACCAACTGCAAGCCTCCAGACTGCCACCTGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 72 bp CAGGACGTGGACTTTCTTTTCCGGAAACTTCTCTGCTaGCCCATGATACAGCGGTCGCCCTGCAGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: QDVDFLFRKLLC*PMIQRSPCRLE
Trigger: CTCCAACCTGCAGGGCGACCGCTGTATCATGGGCCAGCAGAGAAGTTTCCGGAAAAGAAAGTCCACGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 72 bp GCAGGTGCAGGTGGCAGTCTGGAGGCTTGCAGTTGGTaGGTTTTCCATTCATGTCCATGCTGGGTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: AGAGGSLEACSW*VFHSCPCWVAS
Trigger: TGAGGCCACCCAGCATGGACATGAATGGAAAACCAACCAACTGCAAGCCTCCAGACTGCCACCTGCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 72 bp AGGGCTGGTCATCTCCTGCTCCTTCTCGTTGTGCATTaGGGCGTACACGGTCCTGCCTGGCCGTTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: RAGHLLLLLVVH*GVHGPAWPFPF
Trigger: AAAAGGAAACGGCCAGGCAGGACCGTGTACGCCCAAATGCACAACGAGAAGGAGCAGGAGATGACCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505529.1
ENST00000507866.6
CDS TCA 72 bp TCCATCTGGTACCACTCCTGCACCGCCACGAACACCTaGCTCTCGTCCGTGCTGATGATCTGCAGATCCTTT +
Preference number: 6 (lower is better)
Translates to: SIWYHSCTATNT*LSSVLMICRSF
Trigger: AAAGGATCTGCAGATCATCAGCACGGACGAGAGTCAGGTGTTCGTGGCGGTGCAGGAGTGGTACCAGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 72 bp TGGGGCTGTCAGCATCTTCTCGGAGCAATTGTGGATTaGGCAGGTGACGTACCGAAAATCTCCACCGAGGTC +
Preference number: 6 (lower is better)
Translates to: WGCQHLLGAIVD*AGDVPKISTEV
Trigger: GACCTCGGTGGAGATTTTCGGTACGTCACCTGCGCAATCCACAATTGCTCCGAGAAGATGCTGACAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 72 bp GCGAATGGGGCTGTCAGCATCTTCTCGGAGCAATTGTaGATTGCGCAGGTGACGTACCGAAAATCTCCACCG +
Preference number: 6 (lower is better)
Translates to: ANGAVSIFSEQL*IAQVTYRKSPP
Trigger: CGGTGGAGATTTTCGGTACGTCACCTGCGCAATCCACAATTGCTCCGAGAAGATGCTGACAGCCCCATTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CCA 72 bp GCTTGCAGTTGGTTGGTTTTCCATTCATGTCCATGCTaGGTGGCCTCAGGTAATCCCAGTCGCGGCCCTTGT +
Preference number: 6 (lower is better)
Translates to: ACSWLVFHSCPC*VASGNPSRGPC
Trigger: ACAAGGGCCGCGACTGGGATTACCTGAGGCCACCCAGCATGGACATGAATGGAAAACCAACCAACTGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 72 bp CTGAACTTGAGGATCTTCAAAGGGATGGAGGTGTCTTaGATGGCCACGATCACGCCGCCGTGGTCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: LNLRIFKGMEVS*MATITPPWSRY
Trigger: GTACCTGGACCACGGCGGCGTGATCGTGGCCATCAAAGACACCTCCATCCCTTTGAAGATCCTCAAGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 72 bp CAGTCGTCAGGCGGGGACAATGGGTTAAACCAGAAGTaGGCAGAGCACTTGTTGGTGCTGGACTCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: QSSGGDNGLNQK*AEHLLVLDSEE
Trigger: CTCCTCAGAGTCCAGCACCAACAAGTGCTCTGCCAACTTCTGGTTTAACCCATTGTCCCCGCCTGACGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 90 bp GTGACTCACAGGGCTGGTCATCTCCTGCTCCTTCTCGTTGTGCATTaGGGCGTACACGGTCCTGCCTGGCCGTTTCCTGATGAAATTGTA +
Preference number: 6 (lower is better)
Translates to: VTHRAGHLLLLLVVH*GVHGPAWPFPDEIV
Trigger: TACAATTTCATCAGGAAACGGCCAGGCAGGACCGTGTACGCCCAAATGCACAACGAGAAGGAGCAGGAGATGACCAGCCCTGTGAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329016.10
CDS CAA 90 bp GTGACTCACAGGGCTGGTCATCTCCTGCTCCTTCTCGTTGTGCATTaGGGCGTACACGGTCCTGCCTGGCCGTTTCCTTTTGAACTTGTA +
Preference number: 6 (lower is better)
Translates to: VTHRAGHLLLLLVVH*GVHGPAWPFPFELV
Trigger: TACAAGTTCAAAAGGAAACGGCCAGGCAGGACCGTGTACGCCCAAATGCACAACGAGAAGGAGCAGGAGATGACCAGCCCTGTGAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505529.1
ENST00000507866.6
CDS TCA 72 bp ATCAGAGTTTCCACGAAGAAGGGAATGGGCTGCTTCTaGAAGGTGGCGCCTTCGTCTGCGCTGAGGAATAGG +
Preference number: 6 (lower is better)
Translates to: IRVSTKKGMGCF*KVAPSSALRNR
Trigger: CCTATTCCTCAGCGCAGACGAAGGCGCCACCTTTCAGAAGCAGCCCATTCCCTTCTTCGTGGAAACTCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000507866.6
ENST00000511199.1
CDS CCA 72 bp CGTCCACCCCAGACACAGACCAGAACACGTGGTCTTTaGTCACTCGCTCTTGCAGAAGTGTCCACTTTTTCC +
Preference number: 6 (lower is better)
Translates to: RPPQTQTRTRGL*SLALAEVSTFS
Trigger: GGAAAAAGTGGACACTTCTGCAAGAGCGAGTGACCAAAGACCACGTGTTCTGGTCTGTGTCTGGGGTGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000507866.6
ENST00000511199.1
CDS CCA 72 bp GCAGTTGGTTGGTTTTCCATTCATGTCCATGCTGGGTaGCCTCAGGTAATCCCAGTCGCGGCCCTTGTTGTA +
Preference number: 6 (lower is better)
Translates to: AVGWFSIHVHAG*PQVIPVAALVV
Trigger: TACAACAAGGGCCGCGACTGGGATTACCTGAGGCCACCCAGCATGGACATGAATGGAAAACCAACCAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS CAA 72 bp GCGTCCACCCCAGACACAGACCAGAACACGTGGTCTTaGGTCACTCGCTCTTGCAGAAGTGTCCACTTTTTC +
Preference number: 6 (lower is better)
Translates to: ASTPDTDQNTWS*VTRSCRSVHFF
Trigger: GAAAAAGTGGACACTTCTGCAAGAGCGAGTGACCAAAGACCACGTGTTCTGGTCTGTGTCTGGGGTGGACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000507866.6
ENST00000511199.1
CDS CAA 72 bp CCTGCGAATGGGGCTGTCAGCATCTTCTCGGAGCAATaGTGGATTGCGCAGGTGACGTACCGAAAATCTCCA +
Preference number: 6 (lower is better)
Translates to: PANGAVSIFSEQ*WIAQVTYRKSP
Trigger: TGGAGATTTTCGGTACGTCACCTGCGCAATCCACAATTGCTCCGAGAAGATGCTGACAGCCCCATTCGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS TCA 72 bp TCAGCATCTTCTCGGAGCAATTGTGGATTGCGCAGGTaGCGTACCGAAAATCTCCACCGAGGTCTTGGGCTT +
Preference number: 6 (lower is better)
Translates to: SASSRSNCGLRR*RTENLHRGLGL
Trigger: AAGCCCAAGACCTCGGTGGAGATTTTCGGTACGTCACCTGCGCAATCCACAATTGCTCCGAGAAGATGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6
CDS GCA 72 bp TTTCCTGATGAAATTGTAGAGGATGAAGGCTCCCGCTaGGAAGAGCCCGATGACAAACAGCACCACTACCGC +
Preference number: 6 (lower is better)
Translates to: FPDEIVEDEGSR*EEPDDKQHHYR
Trigger: GCGGTAGTGGTGCTGTTTGTCATCGGGCTCTTCGCAGCGGGAGCCTTCATCCTCTACAATTTCATCAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329016.10
CDS GCA 72 bp TTTCCTTTTGAACTTGTAGAGGATGAAGGCTCCCGCTaGGAAGAGCCCGATGACAAACAGCACCACTACCGC +
Preference number: 6 (lower is better)
Translates to: FPFELVEDEGSR*EEPDDKQHHYR
Trigger: GCGGTAGTGGTGCTGTTTGTCATCGGGCTCTTCGCAGCGGGAGCCTTCATCCTCTACAAGTTCAAAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505529.1
ENST00000507866.6
CDS GCA 72 bp ACAGACCAGAACACGTGGTCTTTGGTCACTCGCTCTTaGAGAAGTGTCCACTTTTTCCCCAAGTCAGATGAC +
Preference number: 6 (lower is better)
Translates to: TDQNTWSLVTRS*RSVHFFPKSDD
Trigger: GTCATCTGACTTGGGGAAAAAGTGGACACTTCTGCAAGAGCGAGTGACCAAAGACCACGTGTTCTGGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329016.10
ENST00000507866.6
ENST00000511199.1
CDS CAA 90 bp GCCCTTGTTGTAGGTTATAAGCGTCATCACTTTCCCATCAATTTTTaGGTTTGCCAGGAAGACTCCTTTCACCCCTCTGACCTCCAGGAT +
Preference number: 6 (lower is better)
Translates to: ALVVGYKRHHFPINF*VCQEDSFHPSDLQD
Trigger: ATCCTGGAGGTCAGAGGGGTGAAAGGAGTCTTCCTGGCAAACCAAAAAATTGATGGGAAAGTGATGACGCTTATAACCTACAACAAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329016.10
ENST00000507866.6