RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SORCS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000108018

Ensembl transcript IDs: ENST00000263054.10, ENST00000263054.11, ENST00000344440.7, ENST00000369698.5, ENST00000452214.5, ENST00000472196.1, ENST00000473866.1, ENST00000478809.2, ENST00000486192.1, ENST00000612154.4, ENST00000622431.4

Found 806 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTaGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCAGGTT +
Preference number: 1 (lower is better)
Translates to: HTVPQQIPALALKAE*RVLLFAIGEMSHQV
Trigger: AACCTGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
3UTR CCA 90 bp TGCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATaGTGGAAAGAGGTGAACAGGAAACCAAGGTCCGTTTCTGACATG +
Preference number: 1 (lower is better)
Translates to: CSWGRSRESCKGRQS*WKEVNRKPRSVSDM
Trigger: CATGTCAGAAACGGACCTTGGTTTCCTGTTCACCTCTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR GCA 90 bp TGGAAAGAGGTGAACAGGAAACCAAGGTCCGTTTCTGACATGCTTTaGCTCCCTGCCTCCCTTCCTTCCTTATTCTACCGGCACAAAGGG +
Preference number: 1 (lower is better)
Translates to: WKEVNRKPRSVSDML*LPASLPSLFYRHKG
Trigger: CCCTTTGTGCCGGTAGAATAAGGAAGGAAGGGAGGCAGGGAGGCAAAGCATGTCAGAAACGGACCTTGGTTTCCTGTTCACCTCTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR CCA 90 bp GAACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTaGCATGCTTGGGAATGTACAAAACTGACAAAGGGCTCAGAAACT +
Preference number: 1 (lower is better)
Translates to: EPCCAGCSKVHGHRS*HAWECTKLTKGSET
Trigger: AGTTTCTGAGCCCTTTGTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR TCA 90 bp ACTAGCCCAAGTGATAGTGATACTGCTGATCCAGGTACCACACTTTaGGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCT +
Preference number: 1 (lower is better)
Translates to: TSPSDSDTADPGTTL*EQLAKVLRTMRSSS
Trigger: AGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGTGTGGTACCTGGATCAGCAGTATCACTATCACTTGGGCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR CCA 90 bp GCACATGAGGATCCTGGAGATGCTGAATCTCTAGCTGGCCATCTTTaGTCACTTCCCAAAATGCCAGGTATCTCATGTCGACCTCTATTT +
Preference number: 1 (lower is better)
Translates to: AHEDPGDAESLAGHL*SLPKMPGISCRPLF
Trigger: AAATAGAGGTCGACATGAGATACCTGGCATTTTGGGAAGTGACCAAAGATGGCCAGCTAGAGATTCAGCATCTCCAGGATCCTCATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR GCA 90 bp TATGGAAAGTGGAACAGAGAAACAGCTCAGGGTTTCAAACTCCTGTaGACGTCTTTGTGTCTTATGAAAGGAGCTGGGGTAGCTAATCCA +
Preference number: 1 (lower is better)
Translates to: YGKWNRETAQGFKLL*TSLCLMKGAGVANP
Trigger: TGGATTAGCTACCCCAGCTCCTTTCATAAGACACAAAGACGTGCACAGGAGTTTGAAACCCTGAGCTGTTTCTCTGTTCCACTTTCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR TCA 90 bp CCACTGCTGACCAACAGAGCTACCAAAGCTAACTTAGAAGGGAAATaGCAGTATGGAAAGTGGAACAGAGAAACAGCTCAGGGTTTCAAA +
Preference number: 1 (lower is better)
Translates to: PLLTNRATKANLEGK*QYGKWNRETAQGFK
Trigger: TTTGAAACCCTGAGCTGTTTCTCTGTTCCACTTTCCATACTGTCATTTCCCTTCTAAGTTAGCTTTGGTAGCTCTGTTGGTCAGCAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR GCA 90 bp GTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTaGGAAATTGTCACACATTCAAAACATTTCTCACAAGAATCTTCT +
Preference number: 1 (lower is better)
Translates to: VEIPGNSNRHRRKLP*EIVTHSKHFSQESS
Trigger: AGAAGATTCTTGTGAGAAATGTTTTGAATGTGTGACAATTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR GCA 90 bp AGAGGTTTATCAGAACTTCTTTCTCCTATAGTTTATAGTGGGCTTTaGCCAGTCCATAATACTAAAGGGGCCTCTGCTGAACAGGCTTTT +
Preference number: 1 (lower is better)
Translates to: RGLSELLSPIVYSGL*PVHNTKGASAEQAF
Trigger: AAAAGCCTGTTCAGCAGAGGCCCCTTTAGTATTATGGACTGGGCAAAGCCCACTATAAACTATAGGAGAAAGAAGTTCTGATAAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR TCA 90 bp TCCACATGCACAGGCTTAAAGCTAAAAACCCTTGTTGTCTGTGTCTaGAGAATTAAAAAGTCCCGATGCAGTGAGTGTTTGTTTGTTTGT +
Preference number: 1 (lower is better)
Translates to: STCTGLKLKTLVVCV*RIKKSRCSECLFVC
Trigger: ACAAACAAACAAACACTCACTGCATCGGGACTTTTTAATTCTTCAGACACAGACAACAAGGGTTTTTAGCTTTAAGCCTGTGCATGTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTGGTCCGTTTCTGACATaGTTTGCCTCCCTGCCTCCC +
Preference number: 2 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASGPFLT*FASLPP
Trigger: GGGAGGCAGGGAGGCAAAGCATGTCAGAAACGGACC...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTGCGTTGAAGGCGGAGTaGCGTGTCTTGCTCTTTGCA +
Preference number: 2 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASALKAE*RVLLFA
Trigger: TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGC...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612154.4
3UTR-3UTR GCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTGTTTCTGACATGCTTTaGCTCCCTGCCTCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASVSDML*LPASLP
Trigger: AGGAAGGGAGGCAGGGAGGCAAAGCATGTCAGAAAC...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTAGGAGTAGGGAAAGCTaGAAGGGGAGGCAATCATGG +
Preference number: 2 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASRSRES*KGRQSW
Trigger: CCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCT...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTCATGGGCACAGAAGCTaGCATGCTTGGGAATGTACA +
Preference number: 2 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASHGHRS*HAWECT
Trigger: TGTACATTCCCAAGCATGCCAGCTTCTGTGCCCATG...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTTTGCAATCGGAGAGATaGGTCACCAGGTTGAGTAGA +
Preference number: 2 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASLQSER*VTRLSR
Trigger: TCTACTCAACCTGGTGACTCATCTCTCCGATTGCAA...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612154.4
3UTR-3UTR TCA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGCCTTGTGGCCACTGCTaGCCAACAGAGCTACCAAAG +
Preference number: 2 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKPCGHC*PTELPK
Trigger: CTTTGGTAGCTCTGTTGGTCAGCAGTGGCCACAAGG...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCGGGCTCAGAAACTTGTaGGTAGTGGGGGCAGGGGCG +
Preference number: 2 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILGLRNL*VVGAGA
Trigger: CGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCC...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAAGGGCTCAGAAACTTGTaGGTAGTGGGGGCAGGGGCG +
Preference number: 2 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKGLRNL*VVGAGA
Trigger: CGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCC...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGAGGGCTCAGAAACTTGTaGGTAGTGGGGGCAGGGGCG +
Preference number: 2 (lower is better)
Translates to: NNEVLLSEQHLASLISYRGLRNL*VVGAGA
Trigger: CGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCC...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACTCCCCGCTTTGGCGTTaGAGGCGGAGTGGCGTGTCT +
Preference number: 2 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINSPLWR*RRSGVS
Trigger: AGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGA...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612154.4
3UTR-3UTR GCA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGGTTTCTGACATGCTTTaGCTCCCTGCCTCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKVSDML*LPASLP
Trigger: AGGAAGGGAGGCAGGGAGGCAAAGCATGTCAGAAAC...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTATGGTCACACATGGATaGCAAACAAATGTGAAGACA +
Preference number: 2 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASMVTHG*QTNVKT
Trigger: TGTCTTCACATTTGTTTGTCATCCATGTGTGACCAT...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTAACTTACTTGGGGTTTaGAGGGAAGAGATTCAAAGA +
Preference number: 2 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASNLLGV*REEIQR
Trigger: TCTTTGAATCTCTTCCCTCCAAACCCCAAGTAAGTT...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR CAA 90 bp TTCCTTAAATTGCATACTGTGCCCCAGCAGATCCCCGCTTTGGCGTaGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATG +
Preference number: 2 (lower is better)
Translates to: FLKLHTVPQQIPALA*KAEWRVLLFAIGEM
Trigger: CATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTATGCAATTTAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
3UTR-3UTR GCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACGGTCCGTTTCTGACATaGTTTGCCTCCCTGCCTCCC +
Preference number: 2 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINGPFLT*FASLPP
Trigger: GGGAGGCAGGGAGGCAAAGCATGTCAGAAACGGACC...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGATTTCCTACTGCAGTTaGGGCAGGAGTAGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: EVLLSEQHLASLISYRWEISYCS*GRSRES
Trigger: GCTTTCCCTACTCCTGCCCCAACTGCAGTAGGAAAT...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCATGCAGCAAGGTCCATaGGCACAGAAGCTGGCATGC +
Preference number: 2 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILMQQGP*AQKLAC
Trigger: GCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCAT...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACACCAAGGTCCGTTTCTaGCATGCTTTGCCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINTKVRF*HALPPC
Trigger: GCAGGGAGGCAAAGCATGTCAGAAACGGACCTTGGT...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGAACCAAGGTCCGTTTCTaGCATGCTTTGCCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: NNEVLLSEQHLASLISYRTKVRF*HALPPC
Trigger: GCAGGGAGGCAAAGCATGTCAGAAACGGACCTTGGT...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGTGTGGCCACAGAGAGTaGAGAAAGCAGCCTTGTGGC +
Preference number: 2 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGCGHRE*RKQPCG
Trigger: GCCACAAGGCTGCTTTCTGCACTCTCTGTGGCCACA...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTTGTGGCCACAGAGAGTaGAGAAAGCAGCCTTGTGGC +
Preference number: 2 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVCGHRE*RKQPCG
Trigger: GCCACAAGGCTGCTTTCTGCACTCTCTGTGGCCACA...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGGTGAAGACAGGACAATaGGTAACTAATGGGATTCCA +
Preference number: 2 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLVKTGQ*VTNGIP
Trigger: TGGAATCCCATTAGTTACCCATTGTCCTGTCTTCAC...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGCTAGCTGGCCATCTTTaGTCACTTCCCAAAATGCCA +
Preference number: 2 (lower is better)
Translates to: EVLLSEQHLASLISYRWELAGHL*SLPKMP
Trigger: TGGCATTTTGGGAAGTGACCAAAGATGGCCAGCTAG...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGGTCGCCTGTAGCCTTTaGGGGTTTTCCTTAAATTGC +
Preference number: 2 (lower is better)
Translates to: EVLLSEQHLASLISYRWEVACSL*GFSLNC
Trigger: GCAATTTAAGGAAAACCCCCAAAGGCTACAGGCGAC...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612154.4
3UTR-3UTR TCA 90 bp ATACCCTGTTGGCTTAGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGCCTTGTGGCCACTGCTaGCCAACAGAGCTACCAAAG +
Preference number: 2 (lower is better)
Translates to: IPCWLRDIAKKEAEHTKRPCGHC*PTELPK
Trigger: CTTTGGTAGCTCTGTTGGTCAGCAGTGGCCACAAGG...CCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCTAAGCCAACAGGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGACATGGTGGAAAGAGGTaGACAGGAAACCAAGGTCCG +
Preference number: 2 (lower is better)
Translates to: NNEVLLSEQHLASLISYRHGGKR*TGNQGP
Trigger: CGGACCTTGGTTTCCTGTTCACCTCTTTCCACCATG...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGTGCCTGACAAACTTCTaGCAGCAGCTTTGCTATTCT +
Preference number: 2 (lower is better)
Translates to: EVLLSEQHLASLISYRWECLTNF*QQLCYS
Trigger: AGAATAGCAAAGCTGCTGTCAGAAGTTTGTCAGGCA...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGCTGTGCTGGTTTGAGTaGGCCTCTTTTGATTTTCCA +
Preference number: 2 (lower is better)
Translates to: EVLLSEQHLASLISYRWELCWFE*ASFDFP
Trigger: TGGAAAATCAAAAGAGGCTCACTCAAACCAGCACAG...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTGGATCCTGGAGATGCTaGATCTCTAGCTGGCCATCT +
Preference number: 2 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVGSWRC*ISSWPS
Trigger: AGATGGCCAGCTAGAGATTCAGCATCTCCAGGATCC...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGAGGATCCTGGAGATGCTaGATCTCTAGCTGGCCATCT +
Preference number: 2 (lower is better)
Translates to: NNEVLLSEQHLASLISYRGSWRC*ISSWPS
Trigger: AGATGGCCAGCTAGAGATTCAGCATCTCCAGGATCC...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGAGAGCACCTGTACACTaGCCCTCCAGACATGTTCTC +
Preference number: 2 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVRAPVH*PSRHVL
Trigger: GAGAACATGTCTGGAGGGGCAGTGTACAGGTGCTCT...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAAAGGAGTAGGGAAAGCTaGAAGGGGAGGCAATCATGG +
Preference number: 2 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKRSRES*KGRQSW
Trigger: CCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCT...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGCAGAAAGCAGCCTTGTaGCCACTGCTGACCAACAGA +
Preference number: 2 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVQKAAL*PLLTNR
Trigger: TCTGTTGGTCAGCAGTGGCCACAAGGCTGCTTTCTG...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGGGGAGGCAATCATaGTGGAAAGAGGTGAACAGG +
Preference number: 2 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSKGRQS*WKEVNR
Trigger: CCTGTTCACCTCTTTCCACCATGATTGCCTCCCCTT...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGGAAGGACAACTTACTTaGGGTTTGGAGGGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: EVLLSEQHLASLISYRWEEGQLT*GLEGRD
Trigger: ATCTCTTCCCTCCAAACCCCAAGTAAGTTGTCCTTC...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp ATACCCTGTTGGCTTAGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGATGCAGCAAGGTCCATaGGCACAGAAGCTGGCATGC +
Preference number: 2 (lower is better)
Translates to: IPCWLRDIAKKEAEHTKRMQQGP*AQKLAC
Trigger: GCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCAT...CCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCTAAGCCAACAGGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp ATACCCTGTTGGCTTAGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGCATGGTGGAAAGAGGTaGACAGGAAACCAAGGTCCG +
Preference number: 2 (lower is better)
Translates to: IPCWLRDIAKKEAEHTKRHGGKR*TGNQGP
Trigger: CGGACCTTGGTTTCCTGTTCACCTCTTTCCACCATG...CCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCTAAGCCAACAGGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACGATTCCATTTCCTACTaGAGTTGGGGCAGGAGTAGG +
Preference number: 2 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINDSISY*SWGRSR
Trigger: CCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATC...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTCCCTGCTGTGCAGGATaGAGCAAGGTCCATGGGCAC +
Preference number: 2 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLPCCAG*SKVHGH
Trigger: GTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGG...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCGTCACAGGAGGAAATTaGCCTGCGAAATTGTCACAC +
Preference number: 2 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILVTGGN*PAKLSH
Trigger: GTGTGACAATTTCGCAGGGCAATTTCCTCCTGTGAC...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGTTAAATTGCATACTGTaGCCCAGCAGATCCCCGCTT +
Preference number: 2 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGLNCIL*PSRSPL
Trigger: AAGCGGGGATCTGCTGGGGCACAGTATGCAATTTAA...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
3UTR-3UTR CCA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGAAGGGGAGGCAATCATaGTGGAAAGAGGTGAACAGG +
Preference number: 2 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVKGRQS*WKEVNR
Trigger: CCTGTTCACCTCTTTCCACCATGATTGCCTCCCCTT...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAAATTTCCTACTGCAGTTaGGGCAGGAGTAGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKISYCS*GRSRES
Trigger: GCTTTCCCTACTCCTGCCCCAACTGCAGTAGGAAAT...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCACTGAGCCTTCTTTCATaGTTACCCTGGGAAAAATGG +
Preference number: 2 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSLSLLS*LPWEKW
Trigger: CCATTTTTCCCAGGGTAATCATGAAAGAAGGCTCAG...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp ACTTGGGGTTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACAGGTCCGTTTCTGACATaGTTTGCCTCCCTGCCTCCC +
Preference number: 2 (lower is better)
Translates to: TWGLEGRDSKISTDHGHTGPFLT*FASLPP
Trigger: GGGAGGCAGGGAGGCAAAGCATGTCAGAAACGGACC...TGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAACCCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTTTAAATTGCATACTGTaGCCCAGCAGATCCCCGCTT +
Preference number: 2 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVLNCIL*PSRSPL
Trigger: AAGCGGGGATCTGCTGGGGCACAGTATGCAATTTAA...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000612154.4
3UTR-3UTR CCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGAACTTACTTGGGGTTTaGAGGGAAGAGATTCAAAGA +
Preference number: 2 (lower is better)
Translates to: EVLLSEQHLASLISYRWENLLGV*REEIQR
Trigger: TCTTTGAATCTCTTCCCTCCAAACCCCAAGTAAGTT...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAGAAGGACAACTTACTTaGGGTTTGGAGGGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSEGQLT*GLEGRD
Trigger: ATCTCTTCCCTCCAAACCCCAAGTAAGTTGTCCTTC...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp ATGTTTCCAGGTGGGAAAAGGCAGGGATATTTGAAAAAGGCAGGTTCTAGAGGAATGCAGCAAGGTCCATaGGCACAGAAGCTGGCATGC +
Preference number: 2 (lower is better)
Translates to: MFPGGKRQGYLKKAGSRGMQQGP*AQKLAC
Trigger: GCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCAT...TCCTCTAGAACCTGCCTTTTTCAAATATCCCTGCCTTTTCCCACCTGGAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGGGAAGCCTGGCAGGTTaGGGATCAATTGAGTTCTAC +
Preference number: 2 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSEGSLAG*GSIEFY
Trigger: GTAGAACTCAATTGATCCCCAACCTGCCAGGCTTCC...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTGCTCAGTTGGATTCCTaGAAAACACAGAACAGCTGC +
Preference number: 2 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVAQLDS*KTQNSC
Trigger: GCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGAGC...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTCTGTGCTGGTTTGAGTaGGCCTCTTTTGATTTTCCA +
Preference number: 2 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVLCWFE*ASFDFP
Trigger: TGGAAAATCAAAAGAGGCTCACTCAAACCAGCACAG...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTTGTGGCCACAGAGAGTaGAGAAAGCAGCCTTGTGGC +
Preference number: 2 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLCGHRE*RKQPCG
Trigger: GCCACAAGGCTGCTTTCTGCACTCTCTGTGGCCACA...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATCATGAAACTGAACCCTaGTGTGCAGGATGCAGCAAG +
Preference number: 2 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYHETEP*CAGCSK
Trigger: CTTGCTGCATCCTGCACAGCAGGGTTCAGTTTCATG...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp ATGTTTCCAGGTGGGAAAAGGCAGGGATATTTGAAAAAGGCAGGTTCTAGAGGACAGAAAGCAGCCTTGTaGCCACTGCTGACCAACAGA +
Preference number: 2 (lower is better)
Translates to: MFPGGKRQGYLKKAGSRGQKAAL*PLLTNR
Trigger: TCTGTTGGTCAGCAGTGGCCACAAGGCTGCTTTCTG...TCCTCTAGAACCTGCCTTTTTCAAATATCCCTGCCTTTTCCCACCTGGAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCATGTTTGAGATTCAGCTaGAATGGCCTAGTACAATGG +
Preference number: 2 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSCLRFS*NGLVQW
Trigger: CCATTGTACTAGGCCATTCCAGCTGAATCTCAAACA...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCACTTGTTGTCTGTGTCTaGAGAATTAAAAAGTCCCGA +
Preference number: 2 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSLVVCV*RIKKSR
Trigger: TCGGGACTTTTTAATTCTTCAGACACAGACAACAAG...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACTTAGAAGGGAAATaGCAGTATGGAAAGTGGAAC +
Preference number: 2 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILNLEGK*QYGKWN
Trigger: GTTCCACTTTCCATACTGTCATTTCCCTTCTAAGTT...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGAAAAGGCAGGGATATTTaGAAAAGGCAGGTTCTAGAG +
Preference number: 2 (lower is better)
Translates to: NNEVLLSEQHLASLISYRKGRDI*KRQVLE
Trigger: CTCTAGAACCTGCCTTTTTCAAATATCCCTGCCTTT...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCATTGAACTGCAACTCTaGGGACTCCCTGTGCTGGTT +
Preference number: 2 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSIELQL*GLPVLV
Trigger: AACCAGCACAGGGAGTCCTCAGAGTTGCAGTTCAAT...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAACCCTGCTGTGCAGGATaGAGCAAGGTCCATGGGCAC +
Preference number: 2 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQPCCAG*SKVHGH
Trigger: GTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGG...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp ATGTTTCCAGGTGGGAAAAGGCAGGGATATTTGAAAAAGGCAGGTTCTAGAGGACATGAAACTGAACCCTaGTGTGCAGGATGCAGCAAG +
Preference number: 2 (lower is better)
Translates to: MFPGGKRQGYLKKAGSRGHETEP*CAGCSK
Trigger: CTTGCTGCATCCTGCACAGCAGGGTTCAGTTTCATG...TCCTCTAGAACCTGCCTTTTTCAAATATCCCTGCCTTTTCCCACCTGGAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTCAGAAAGCAGCCTTGTaGCCACTGCTGACCAACAGA +
Preference number: 2 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSQKAAL*PLLTNR
Trigger: TCTGTTGGTCAGCAGTGGCCACAAGGCTGCTTTCTG...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTGTGTTATACCCTGTTaGCTTAGGGACATAGCAAAG +
Preference number: 2 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVCVIPC*LRDIAK
Trigger: CTTTGCTATGTCCCTAAGCCAACAGGGTATAACACA...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGAAACTTAGAAGGGAAATaGCAGTATGGAAAGTGGAAC +
Preference number: 2 (lower is better)
Translates to: NNEVLLSEQHLASLISYRNLEGK*QYGKWN
Trigger: GTTCCACTTTCCATACTGTCATTTCCCTTCTAAGTT...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAACTTTAATGATACTATaGTACTCAGAGGTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSTLMIL*YSEVRE
Trigger: CTCTCTGACCTCTGAGTATCATAGTATCATTAAAGT...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACGTTTCTGACATGCTTTaGCTCCCTGCCTCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDVSDML*LPASLP
Trigger: AGGAAGGGAGGCAGGGAGGCAAAGCATGTCAGAAAC...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp ATACCCTGTTGGCTTAGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGAGGAGGAAATTGCCCTaGGAAATTGTCACACATTCA +
Preference number: 2 (lower is better)
Translates to: IPCWLRDIAKKEAEHTKRRRKLP*EIVTHS
Trigger: TGAATGTGTGACAATTTCGCAGGGCAATTTCCTCCT...CCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCTAAGCCAACAGGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCGTTTATAGTGGGCTTTaGCCAGTCCATAATACTAAA +
Preference number: 2 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILVYSGL*PVHNTK
Trigger: TTTAGTATTATGGACTGGGCAAAGCCCACTATAAAC...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCGGTCACTTCCCAAAATaGCAGGTATCTCATGTCGAC +
Preference number: 2 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSGHFPK*QVSHVD
Trigger: GTCGACATGAGATACCTGGCATTTTGGGAAGTGACC...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTAACTTACTTGGGGTTTaGAGGGAAGAGATTCAAAGA +
Preference number: 2 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVNLLGV*REEIQR
Trigger: TCTTTGAATCTCTTCCCTCCAAACCCCAAGTAAGTT...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGCTTGTTGTCTGTGTCTaGAGAATTAAAAAGTCCCGA +
Preference number: 2 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSELVVCV*RIKKSR
Trigger: TCGGGACTTTTTAATTCTTCAGACACAGACAACAAG...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTGTCAGAGAGCACACATaGAATCACTGGGATCATCCT +
Preference number: 2 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLVREHT*NHWDHP
Trigger: AGGATGATCCCAGTGATTTCATGTGTGCTCTCTGAC...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTTTGGGAGACTCCAACTaGAGAGGATCAATGAGGATG +
Preference number: 2 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLLGDSN*RGSMRM
Trigger: CATCCTCATTGATCCTCTTCAGTTGGAGTCTCCCAA...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCATTAAAAAGTCCCGATaGAGTGAGTGTTTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILIKKSR*SECLFV
Trigger: AACAAACAAACACTCACTGCATCGGGACTTTTTAAT...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp TTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGCAGGAGTAGGGAAAGCTaGAAGGGGAGGCAATCATGG +
Preference number: 2 (lower is better)
Translates to: FAYINSFAYSICFQVGKGRSRES*KGRQSW
Trigger: CCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCT...GCCTTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTGTCACAGGAGGAAATTaGCCTGCGAAATTGTCACAC +
Preference number: 2 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLVTGGN*PAKLSH
Trigger: GTGTGACAATTTCGCAGGGCAATTTCCTCCTGTGAC...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGAGTTTATAGTGGGCTTTaGCCAGTCCATAATACTAAA +
Preference number: 2 (lower is better)
Translates to: NNEVLLSEQHLASLISYRVYSGL*PVHNTK
Trigger: TTTAGTATTATGGACTGGGCAAAGCCCACTATAAAC...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATGTGAAGACAGGACAATaGGTAACTAATGGGATTCCA +
Preference number: 2 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYVKTGQ*VTNGIP
Trigger: TGGAATCCCATTAGTTACCCATTGTCCTGTCTTCAC...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGGATCATGGTCACACATaGATGACAAACAAATGTGAA +
Preference number: 2 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGDHGHT*MTNKCE
Trigger: TTCACATTTGTTTGTCATCCATGTGTGACCATGATC...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATAGAAGCTGGCATGCTTaGGAATGTACAAAACTGACA +
Preference number: 2 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYRSWHA*ECTKLT
Trigger: TGTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCT...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATCTCACAAGAATCTTCTaGAATCAGATCGCACGAGAT +
Preference number: 2 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYLTRIF*NQIARD
Trigger: ATCTCGTGCGATCTGATTCCAGAAGATTCTTGTGAG...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATTGTGTTATACCCTGTTaGCTTAGGGACATAGCAAAG +
Preference number: 2 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYCVIPC*LRDIAK
Trigger: CTTTGCTATGTCCCTAAGCCAACAGGGTATAACACA...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGAAACTACATGAAGTCATaGACATCAGGATCTTTAGGA +
Preference number: 2 (lower is better)
Translates to: NNEVLLSEQHLASLISYRNYMKS*TSGSLG
Trigger: TCCTAAAGATCCTGATGTCCATGACTTCATGTAGTT...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTCTAATCTCCTACAGATaGGAGGGAGCTTTGAGGAGA +
Preference number: 2 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLLISYR*EGALRR
Trigger: TCTCCTCAAAGCTCCCTCCCATCTGTAGGAGATTAG...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGAAGTAGGTATGGGGTATaGATCCAGAATCTGGATCTC +
Preference number: 2 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGSRYGV*IQNLDL
Trigger: GAGATCCAGATTCTGGATCCATACCCCATACCTACT...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGAAAAACTGAGAACAGTTaGAGGACAACTTACTTGGGG +
Preference number: 2 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGKTENS*RTTYLG
Trigger: CCCCAAGTAAGTTGTCCTTCAACTGTTCTCAGTTTT...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp ATGTTTCCAGGTGGGAAAAGGCAGGGATATTTGAAAAAGGCAGGTTCTAGAGGAAAAGGCAGGGATATTTaGAAAAGGCAGGTTCTAGAG +
Preference number: 2 (lower is better)
Translates to: MFPGGKRQGYLKKAGSRGKGRDI*KRQVLE
Trigger: CTCTAGAACCTGCCTTTTTCAAATATCCCTGCCTTT...TCCTCTAGAACCTGCCTTTTTCAAATATCCCTGCCTTTTCCCACCTGGAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGGTACATGGCCAGGTTTaGATTACTTTGCATATATCA +
Preference number: 2 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSEVHGQV*ITLHIS
Trigger: TGATATATGCAAAGTAATTCAAACCTGGCCATGTAC...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCAGAAGCTGGCATGCTTaGGAATGTACAAAACTGACA +
Preference number: 2 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSRSWHA*ECTKLT
Trigger: TGTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCT...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGACTTGTTGTCTGTGTCTaGAGAATTAAAAAGTCCCGA +
Preference number: 2 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGLVVCV*RIKKSR
Trigger: TCGGGACTTTTTAATTCTTCAGACACAGACAACAAG...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGAATGGTCACACATGGATaGCAAACAAATGTGAAGACA +
Preference number: 2 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGMVTHG*QTNVKT
Trigger: TGTCTTCACATTTGTTTGTCATCCATGTGTGACCAT...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTAAAACTGAGAACAGTTaGAGGACAACTTACTTGGGG +
Preference number: 2 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSKTENS*RTTYLG
Trigger: CCCCAAGTAAGTTGTCCTTCAACTGTTCTCAGTTTT...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGAAAACTGAGAACAGTTaGAGGACAACTTACTTGGGG +
Preference number: 2 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKKTENS*RTTYLG
Trigger: CCCCAAGTAAGTTGTCCTTCAACTGTTCTCAGTTTT...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATACTTTAATGATACTATaGTACTCAGAGGTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYTLMIL*YSEVRE
Trigger: CTCTCTGACCTCTGAGTATCATAGTATCATTAAAGT...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAAAAGGGGAGGCAATCATaGTGGAAAGAGGTGAACAGG +
Preference number: 2 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQKGRQS*WKEVNR
Trigger: CCTGTTCACCTCTTTCCACCATGATTGCCTCCCCTT...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTCTCACAAGAATCTTCTaGAATCAGATCGCACGAGAT +
Preference number: 2 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSLTRIF*NQIARD
Trigger: ATCTCGTGCGATCTGATTCCAGAAGATTCTTGTGAG...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR CAA 90 bp TGGGAAGAAAAACTGAGAACAGTTGAAGGACAACTTACTTGGGGTTaGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACA +
Preference number: 2 (lower is better)
Translates to: WEEKLRTVEGQLTWG*EGRDSKISTDHGHT
Trigger: TGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAACCCCAAGTAAGTTGTCCTTCAACTGTTCTCAGTTTTTCTTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp TTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGCGCACAGAAGCTGGCATaGTTGGGAATGTACAAAACT +
Preference number: 2 (lower is better)
Translates to: FAYINSFAYSICFQVGKGAQKLA*LGMYKT
Trigger: AGTTTTGTACATTCCCAAGCATGCCAGCTTCTGTGC...GCCTTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATCTTTTCCAAAGTACATaGCCAGGTTTGAATTACTTT +
Preference number: 2 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYLFQST*PGLNYF
Trigger: AAAGTAATTCAAACCTGGCCATGTACTTTGGAAAAG...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACATGGTCACACATGGATaGCAAACAAATGTGAAGACA +
Preference number: 2 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDMVTHG*QTNVKT
Trigger: TGTCTTCACATTTGTTTGTCATCCATGTGTGACCAT...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR TCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGGTACATGGCCAGGTTTaGATTACTTTGCATATATCA +
Preference number: 2 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKVHGQV*ITLHIS
Trigger: TGATATATGCAAAGTAATTCAAACCTGGCCATGTAC...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACAGAGTATTGTCCACATaGACAGGCTTAAAGCTAAAA +
Preference number: 2 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNRVLST*TGLKLK
Trigger: TTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCT...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTAGAGTATTGTCCACATaGACAGGCTTAAAGCTAAAA +
Preference number: 2 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLRVLST*TGLKLK
Trigger: TTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCT...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTGATTCTCAGCAACTATaGAAATACTTCCTGGCAAAA +
Preference number: 2 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLDSQQL*KYFLAK
Trigger: TTTTGCCAGGAAGTATTTCCATAGTTGCTGAGAATC...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTGATCATGGTCACACATaGATGACAAACAAATGTGAA +
Preference number: 2 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLDHGHT*MTNKCE
Trigger: TTCACATTTGTTTGTCATCCATGTGTGACCATGATC...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTTATGGAAATACTTCCTaGCAAAATAGGAAACAGAAC +
Preference number: 2 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLYGNTS*QNRKQN
Trigger: GTTCTGTTTCCTATTTTGCCAGGAAGTATTTCCATA...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGTATGGAAATACTTCCTaGCAAAATAGGAAACAGAAC +
Preference number: 2 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKYGNTS*QNRKQN
Trigger: GTTCTGTTTCCTATTTTGCCAGGAAGTATTTCCATA...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAAAGAAGCTGGCATGCTTaGGAATGTACAAAACTGACA +
Preference number: 2 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQRSWHA*ECTKLT
Trigger: TGTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCT...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR GCA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGTTTCAAACTCCTGTaGACGTCTTTGTGTCTTATG +
Preference number: 2 (lower is better)
Translates to: YFAYINSFAYSICFQVGKGFKLL*TSLCLM
Trigger: CATAAGACACAAAGACGTGCACAGGAGTTTGAAACC...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAAGATTCTCAGCAACTATaGAAATACTTCCTGGCAAAA +
Preference number: 2 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQDSQQL*KYFLAK
Trigger: TTTTGCCAGGAAGTATTTCCATAGTTGCTGAGAATC...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAACTTTTCCAAAGTACATaGCCAGGTTTGAATTACTTT +
Preference number: 2 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQLFQST*PGLNYF
Trigger: AAAGTAATTCAAACCTGGCCATGTACTTTGGAAAAG...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CCA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAATATGGAAATACTTCCTaGCAAAATAGGAAACAGAAC +
Preference number: 2 (lower is better)
Translates to: YFAYINSFAYSICFQVGKYGNTS*QNRKQN
Trigger: GTTCTGTTTCCTATTTTGCCAGGAAGTATTTCCATA...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGCAGCAGATCCCCGCTTaGGCGTTGAAGGCGGAGTGG +
Preference number: 3 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLQQIPA*ALKAEW
Trigger: CCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612154.4
3UTR-3UTR CAA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTCAGAAGCTGGCATGCTaGGGAATGTACAAAACTGAC +
Preference number: 3 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASQKLAC*GMYKTD
Trigger: GTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCTG...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR TCA 72 bp TGCATACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTaGAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCG +
Preference number: 3 (lower is better)
Translates to: CILCPSRSPLWR*RRSGVSCSLQS
Trigger: CGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
3UTR CCA 72 bp CCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTaGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGT +
Preference number: 3 (lower is better)
Translates to: PQQIPALALKAE*RVLLFAIGEMS
Trigger: ACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
3UTR-3UTR CAA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGCAGCAGATCCCCGCTTaGGCGTTGAAGGCGGAGTGG +
Preference number: 3 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGQQIPA*ALKAEW
Trigger: CCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
3UTR-3UTR CAA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGCTTCAACTCGCATCTTaGTTCCTGTGGCCACAGAGA +
Preference number: 3 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKLQLAS*FLWPQR
Trigger: TCTCTGTGGCCACAGGAACAAAGATGCGAGTTGAAG...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGGCGGAGTGGCGTGTCTaGCTCTTTGCAATCGGAGAG +
Preference number: 3 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGAEWRV*LFAIGE
Trigger: CTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGC...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
3UTR-3UTR CAA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTCGATGCAGTGAGTGTTaGTTTGTTTGTTTGGATTTT +
Preference number: 3 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASRCSEC*FVCLDF
Trigger: AAAATCCAAACAAACAAACAAACACTCACTGCATCG...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGCTCCTGTGCACGTCTTaGTGTCTTATGAAAGGAGCT +
Preference number: 3 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKLLCTS*CLMKGA
Trigger: AGCTCCTTTCATAAGACACAAAGACGTGCACAGGAG...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR CCA 72 bp TGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTaGCATGCTTGGGAATGTACAAAACTGACAAAGGGC +
Preference number: 3 (lower is better)
Translates to: CAGCSKVHGHRS*HAWECTKLTKG
Trigger: GCCCTTTGTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTATCCCCGCTTTGGCGTaGAAGGCGGAGTGGCGTGTC +
Preference number: 3 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLIPALA*KAEWRV
Trigger: GACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612154.4
3UTR GCA 72 bp AGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATaGTTGGGAATGTACAAAACTGACAAAGGGCTCAGA +
Preference number: 3 (lower is better)
Translates to: RMQQGPWAQKLA*LGMYKTDKGLR
Trigger: TCTGAGCCCTTTGTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR GCA 72 bp ACAAAGATACATGAAACTGAACCCTGCTGTGCAGGATaGAGCAAGGTCCATGGGCACAGAAGCTGGCATGCT +
Preference number: 3 (lower is better)
Translates to: TKIHETEPCCAG*SKVHGHRSWHA
Trigger: AGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGTTCAGTTTCATGTATCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTCTTCAACTCGCATCTTaGTTCCTGTGGCCACAGAGA +
Preference number: 3 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVLQLAS*FLWPQR
Trigger: TCTCTGTGGCCACAGGAACAAAGATGCGAGTTGAAG...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR CCA 72 bp TGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTaGGAATGTACAAAACTGACAAAGGGCTCAGAAACT +
Preference number: 3 (lower is better)
Translates to: CSKVHGHRSWHA*ECTKLTKGSET
Trigger: AGTTTCTGAGCCCTTTGTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR CCA 72 bp ACCCTCATTATCACCAGGGCCTGTGTTATACCCTGTTaGCTTAGGGACATAGCAAAGAAGGAGGCTGAGCAT +
Preference number: 3 (lower is better)
Translates to: TLIITRACVIPC*LRDIAKKEAEH
Trigger: ATGCTCAGCCTCCTTCTTTGCTATGTCCCTAAGCCAACAGGGTATAACACAGGCCCTGGTGATAATGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR CCA 72 bp CGGCAAATGAGAGATTTCAATGCTCAGTTGGATTCCTaGAAAACACAGAACAGCTGCCAAGCACCCCACTGC +
Preference number: 3 (lower is better)
Translates to: RQMRDFNAQLDS*KTQNSCQAPHC
Trigger: GCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGAGCATTGAAATCTCTCATTTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAACAGAAGCTGGCATGCTaGGGAATGTACAAAACTGAC +
Preference number: 3 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKQKLAC*GMYKTD
Trigger: GTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCTG...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCACCACTGCTCTCAAAGTaGCTGTTTGGAACTTCTGAA +
Preference number: 3 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSPLLSK*LFGTSE
Trigger: TTCAGAAGTTCCAAACAGCAACTTTGAGAGCAGTGG...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACGCGGAGTGGCGTGTCTaGCTCTTTGCAATCGGAGAG +
Preference number: 3 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNAEWRV*LFAIGE
Trigger: CTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGC...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612154.4
3UTR-3UTR CAA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGCAGAAGCTGGCATGCTaGGGAATGTACAAAACTGAC +
Preference number: 3 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSEQKLAC*GMYKTD
Trigger: GTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCTG...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGCAACTTACTTGGGGTTaGGAGGGAAGAGATTCAAAG +
Preference number: 3 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSEQLTWG*EGRDSK
Trigger: CTTTGAATCTCTTCCCTCCAAACCCCAAGTAAGTTG...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR GCA 72 bp TGGAACAGAGAAACAGCTCAGGGTTTCAAACTCCTGTaGACGTCTTTGTGTCTTATGAAAGGAGCTGGGGTA +
Preference number: 3 (lower is better)
Translates to: WNRETAQGFKLL*TSLCLMKGAGV
Trigger: TACCCCAGCTCCTTTCATAAGACACAAAGACGTGCACAGGAGTTTGAAACCCTGAGCTGTTTCTCTGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTCGTCACAGGAGGAAATaGCCCTGCGAAATTGTCACA +
Preference number: 3 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLRHRRK*PCEIVT
Trigger: TGTGACAATTTCGCAGGGCAATTTCCTCCTGTGACG...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTTTGAGTGAGCCTCTTTaGATTTTCCAACACTTTGTC +
Preference number: 3 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVLSEPL*IFQHFV
Trigger: GACAAAGTGTTGGAAAATCAAAAGAGGCTCACTCAA...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR TCA 72 bp AACTGCAACTCTGAGGACTCCCTGTGCTGGTTTGAGTaGGCCTCTTTTGATTTTCCAACACTTTGTCTTCCA +
Preference number: 3 (lower is better)
Translates to: NCNSEDSLCWFE*ASFDFPTLCLP
Trigger: TGGAAGACAAAGTGTTGGAAAATCAAAAGAGGCTCACTCAAACCAGCACAGGGAGTCCTCAGAGTTGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR TCA 72 bp AGTGATAGTGATACTGCTGATCCAGGTACCACACTTTaGGAACAACTGGCCAAGGTCCTAAGAACAATGAGG +
Preference number: 3 (lower is better)
Translates to: SDSDTADPGTTL*EQLAKVLRTMR
Trigger: CCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGTGTGGTACCTGGATCAGCAGTATCACTATCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR GCA 72 bp TGCCCCTCCAGACATGTTCTCAGAGTATTGTCCACATaGACAGGCTTAAAGCTAAAAACCCTTGTTGTCTGT +
Preference number: 3 (lower is better)
Translates to: CPSRHVLRVLST*TGLKLKTLVVC
Trigger: ACAGACAACAAGGGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAGGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp ATGTTTCCAGGTGGGAAAAGGCAGGGATATTTGAAAAAGGCAGGTTCTAGAGGACATGTTCTCAGAGTATaGTCCACATGCACAGGCTTA +
Preference number: 3 (lower is better)
Translates to: MFPGGKRQGYLKKAGSRGHVLRV*STCTGL
Trigger: TAAGCCTGTGCATGTGGACAATACTCTGAGAACATG...TCCTCTAGAACCTGCCTTTTTCAAATATCCCTGCCTTTTCCCACCTGGAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCCATGTTCTCAGAGTATaGTCCACATGCACAGGCTTA +
Preference number: 3 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSHVLRV*STCTGL
Trigger: TAAGCCTGTGCATGTGGACAATACTCTGAGAACATG...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCCAACTTACTTGGGGTTaGGAGGGAAGAGATTCAAAG +
Preference number: 3 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSQLTWG*EGRDSK
Trigger: CTTTGAATCTCTTCCCTCCAAACCCCAAGTAAGTTG...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTATTCTCTCAGACTGTTaGACACTCTTAAACACAAAG +
Preference number: 3 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVILSDC*TLLNTK
Trigger: CTTTGTGTTTAAGAGTGTCAAACAGTCTGAGAGAAT...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGAATTCTCTCAGACTGTTaGACACTCTTAAACACAAAG +
Preference number: 3 (lower is better)
Translates to: NNEVLLSEQHLASLISYRILSDC*TLLNTK
Trigger: CTTTGTGTTTAAGAGTGTCAAACAGTCTGAGAGAAT...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR TCA 72 bp TGGAAAACGTTGCAGTATCGGATTTTTAGCTTGCCCTaGATCTTACCTTCCACATACATCCCTCCCTACACA +
Preference number: 3 (lower is better)
Translates to: WKTLQYRIFSLP*ILPSTYIPPYT
Trigger: TGTGTAGGGAGGGATGTATGTGGAAGGTAAGATTCAGGGCAAGCTAAAAATCCGATACTGCAACGTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR GCA 72 bp CCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTaGGAAATTGTCACACATTCAAAACATTTCTCACAA +
Preference number: 3 (lower is better)
Translates to: PGNSNRHRRKLP*EIVTHSKHFSQ
Trigger: TTGTGAGAAATGTTTTGAATGTGTGACAATTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR GCA 72 bp TCAGAACTTCTTTCTCCTATAGTTTATAGTGGGCTTTaGCCAGTCCATAATACTAAAGGGGCCTCTGCTGAA +
Preference number: 3 (lower is better)
Translates to: SELLSPIVYSGL*PVHNTKGASAE
Trigger: TTCAGCAGAGGCCCCTTTAGTATTATGGACTGGGCAAAGCCCACTATAAACTATAGGAGAAAGAAGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR TCA 72 bp TCATATGGGGTATCCTCAACCATAAACATCTCTGCCTaGCAAACTTCTGACAGCAGCTTTGCTATTCTTTCT +
Preference number: 3 (lower is better)
Translates to: SYGVSSTINISA*QTSDSSFAILS
Trigger: AGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTCAGGCAGAGATGTTTATGGTTGAGGATACCCCATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR GCA 72 bp AAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTaGCCTGCGAAATTGTCACACATTCAAAACATTTCT +
Preference number: 3 (lower is better)
Translates to: KYQVTATVTGGN*PAKLSHIQNIS
Trigger: AGAAATGTTTTGAATGTGTGACAATTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp ACTTGGGGTTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACACGATGCAGTGAGTGTTaGTTTGTTTGTTTGGATTTT +
Preference number: 3 (lower is better)
Translates to: TWGLEGRDSKISTDHGHTRCSEC*FVCLDF
Trigger: AAAATCCAAACAAACAAACAAACACTCACTGCATCG...TGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAACCCCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAACAACTTACTTGGGGTTaGGAGGGAAGAGATTCAAAG +
Preference number: 3 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQQLTWG*EGRDSK
Trigger: CTTTGAATCTCTTCCCTCCAAACCCCAAGTAAGTTG...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTAGTACATGGCCAGGTTaGAATTACTTTGCATATATC +
Preference number: 3 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSSTWPG*NYFAYI
Trigger: GATATATGCAAAGTAATTCAAACCTGGCCATGTACT...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR-3UTR CAA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGAATTGCCCTGCGAAATaGTCACACATTCAAAACATT +
Preference number: 3 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKNCPAK*SHIQNI
Trigger: AATGTTTTGAATGTGTGACAATTTCGCAGGGCAATT...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR CCA 72 bp AGAGATTCAAAGATATCAACAGATCATGGTCACACATaGATGACAAACAAATGTGAAGACAGGACAATGGGT +
Preference number: 3 (lower is better)
Translates to: RDSKISTDHGHT*MTNKCEDRTMG
Trigger: ACCCATTGTCCTGTCTTCACATTTGTTTGTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
3UTR TCA 72 bp CTCTATGCTTTCTTTTCCAAAGTACATGGCCAGGTTTaGATTACTTTGCATATATCAACTCTTTCGCATACA +
Preference number: 3 (lower is better)
Translates to: LYAFFSKVHGQV*ITLHISTLSHT
Trigger: TGTATGCGAAAGAGTTGATATATGCAAAGTAATTCAAACCTGGCCATGTACTTTGGAAAAGAAAGCATAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAGGGTGCCCACTTGGCTaGGCCACAGCACTGCCGTCG +
Preference number: 4 (lower is better)
Translates to: QQIPALALKAEWRVLLFAGCPLG*ATALPS
Trigger: CGACGGCAGTGCTGTGGCCCAGCCAAGTGGGCACCC...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTATGTGGCCGCCCTCCTaGTGTCAGCTGAACAAACAC +
Preference number: 4 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASMWPPS*CQLNKH
Trigger: GTGTTTGTTCAGCTGACATCAGGAGGGCGGCCACAT...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCATCCCCGCTTTGGCGTTaGAGGCGGAGTGGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: QQIPALALKAEWRVLLFASPLWR*RRSGVS
Trigger: AGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGA...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTGCTGGGCCACAGCACTaGCGTCGCATTGACCTCTTT +
Preference number: 4 (lower is better)
Translates to: APADPRFGVEGGVACLALAGPQH*RRIDLF
Trigger: AAAGAGGTCAATGCGACGGCAGTGCTGTGGCCCAGC...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGACCGCGGGGCTTTCCCTaGGCACTTCTGCGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: IPALALKAEWRVLLFAIGPRGFP*ALLRFG
Trigger: GCCAAACCGCAGAAGTGCCCAGGGAAAGCCCCGCGG...TCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGCCGCGGGGCTTTCCCTaGGCACTTCTGCGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKPRGFP*ALLRFG
Trigger: GCCAAACCGCAGAAGTGCCCAGGGAAAGCCCCGCGG...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGGCCACCAGGATGTGCTaGCCTGGAACCCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRATRMC*PGTPVA
Trigger: AGCCACAGGGGTTCCAGGCCAGCACATCCTGGTGGC...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGCTTTCCATCAGCCGTaGCTATCCGCAGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: RFGVEGGVACLALCNRRDAFHQP*LSAAPA
Trigger: CGCGGGGGCTGCGGATAGTCACGGCTGATGGAAAGC...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp TACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGGGGCCGCTGTTAAGTaGGCAGCATGGACAAGGACT +
Preference number: 4 (lower is better)
Translates to: YCAPADPRFGVEGGVACLGAAVK*AAWTRT
Trigger: AGTCCTTGTCCATGCTGCTCACTTAACAGCGGCCCC...AAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTCCAGGTACCACACTTTaGGAACAACTGGCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASPGTTL*EQLAKV
Trigger: GACCTTGGCCAGTTGTTCTCAAAGTGTGGTACCTGG...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGATCCGTGTCCGGCGCCTaGAGCAAACGCCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: IPALALKAEWRVLLFAIGSVSGA*SKRQSL
Trigger: CAGAGACTGGCGTTTGCTGCAGGCGCCGGACACGGA...TCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTGCAGGCACTGGCCATTaGTGTGTCGCTCATAACCAT +
Preference number: 4 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASAGTGH*CVAHNH
Trigger: ATGGTTATGAGCGACACAGCAATGGCCAGTGCCTGC...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTAATGCCGGCAGGCACTaGCCATTGCTGTGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: YCAPADPRFGVEGGVACLNAGRH*PLLCRS
Trigger: TGAGCGACACAGCAATGGCCAGTGCCTGCCGGCATT...AAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGCAGGATGTGCTGGCCTaGAACCCCTGTGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRQDVLA*NPCGFH
Trigger: GTGGAAGCCACAGGGGTTCCAGGCCAGCACATCCTG...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTGCGTTGAAGGCGGAGTaGCGTGTCTTGCTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: APADPRFGVEGGVACLALALKAE*RVLLFA
Trigger: TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGC...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp TACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTCATAGAGGTCGATCATaGTGTTGCCCTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: YCAPADPRFGVEGGVACLHRGRS*CCPQGL
Trigger: GAGGCCCTGAGGGCAACATCATGATCGACCTCTATG...AAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTGGCCTGCTTTCAGAGTaGCTGACTGGACTGATCATC +
Preference number: 4 (lower is better)
Translates to: APADPRFGVEGGVACLALGLLSE*LTGLII
Trigger: GATGATCAGTCCAGTCAGTCACTCTGAAAGCAGGCC...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCACCTCAGGGCCTCTGCTaGTCTGGACATTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QQIPALALKAEWRVLLFAPQGLC*SGHSPR
Trigger: CCTTGGAGAATGTCCAGAGCAGCAGAGGCCCTGAGG...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATACCGCCACCAGGATGTaGTGGCCTGGAACCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RFGVEGGVACLALCNRRDTATRM*WPGTPV
Trigger: CACAGGGGTTCCAGGCCAGCACATCCTGGTGGCGGT...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTGTAGATGACGAACACTaGCAGCCCCACAAACACCAC +
Preference number: 4 (lower is better)
Translates to: APADPRFGVEGGVACLALVDDEH*QPHKHH
Trigger: GTGGTGTTTGTGGGGCTGGCAGTGTTCGTCATCTAC...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAGGGTGCCCACTTGGCTaGGCCACAGCACTGCCGTCG +
Preference number: 4 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSGCPLG*ATALPS
Trigger: CGACGGCAGTGCTGTGGCCCAGCCAAGTGGGCACCC...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGGTGAGGGTGCCCACTTaGCTGGGCCACAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDEVRVPT*LGHSTA
Trigger: GGCAGTGCTGTGGCCCAGCCAAGTGGGCACCCTCAC...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGCCACCAGGATGTGCTaGCCTGGAACCCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RFGVEGGVACLALCNRRDATRMC*PGTPVA
Trigger: AGCCACAGGGGTTCCAGGCCAGCACATCCTGGTGGC...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGTTCAGCAGTGGTaGGTAAGCCAGGGAGCACCG +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRRVQQW*VSQGAP
Trigger: CGGTGCTCCCTGGCTTACCCACCACTGCTGAACTCT...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGCATAGAGGTCGATCATaGTGTTGCCCTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRHRGRS*CCPQGL
Trigger: GAGGCCCTGAGGGCAACATCATGATCGACCTCTATG...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp TACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTACAGAGAGGATGGATTaGACCAAAATGCCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: YCAPADPRFGVEGGVACLTERMD*TKMPAG
Trigger: GCCTGCCGGCATTTTGGTTCAATCCATCCTCTCTGT...AAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTCAGCTCGAAGTGTACTaGGTTTTGGTTGAGCGTGTG +
Preference number: 4 (lower is better)
Translates to: APADPRFGVEGGVACLALQLEVY*VLVERV
Trigger: CACACGCTCAACCAAAACTCAGTACACTTCGAGCTG...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGACCAAGGTCCGTTTCTaGCATGCTTTGCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLTKVRF*HALPPC
Trigger: GCAGGGAGGCAAAGCATGTCAGAAACGGACCTTGGT...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCATCCGTGTCCGGCGCCTaGAGCAAACGCCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPSVSGA*SKRQSL
Trigger: CAGAGACTGGCGTTTGCTGCAGGCGCCGGACACGGA...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTAACTCTGTCCCAAGCTaGAATCCTTTGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASNSVPS*NPLTER
Trigger: CCTCTCTGTCAAAGGATTGCAGCTTGGGACAGAGTT...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCATGTGGCCACAGAGAGTaGAGAAAGCAGCCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: QQIPALALKAEWRVLLFACGHRE*RKQPCG
Trigger: GCCACAAGGCTGCTTTCTGCACTCTCTGTGGCCACA...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR GCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTCTACAAATAGGTGACTaGCTCAGGCCTAGCCCATTT +
Preference number: 4 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASLQIGD*LRPSPF
Trigger: AAATGGGCTAGGCCTGAGGCAGTCACCTATTTGTAG...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGAGAGTTCAGCAGTGGTaGGTAAGCCAGGGAGCACCG +
Preference number: 4 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKRVQQW*VSQGAP
Trigger: CGGTGCTCCCTGGCTTACCCACCACTGCTGAACTCT...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTACCTGATGCCACTATaGTGCTTGGAGCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: APADPRFGVEGGVACLALYLMPL*CLELCL
Trigger: AAGACACAGCTCCAAGCATCATAGTGGCATCAGGTA...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGACAGAGAGGATGGATTaGACCAAAATGCCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRTERMD*TKMPAG
Trigger: GCCTGCCGGCATTTTGGTTCAATCCATCCTCTCTGT...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCAACCACCACACGTAAGTaGGGGTGCCCACTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPTTTRK*GCPLGW
Trigger: CCAGCCAAGTGGGCACCCTCACTTACGTGTGGTGGT...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGTGCTTCCCTCCAAGGTaGTCAAAGGCTCCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRCFPPR*SKAPCC
Trigger: ACAACACGGAGCCTTTGATCACCTTGGAGGGAAGCA...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTCTGAGACCTGCACTGTaGTGGTATTCATTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: APADPRFGVEGGVACLALLRPAL*WYSFLL
Trigger: CAGAAGGAATGAATACCATCACAGTGCAGGTCTCAG...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGCCTCAGGGCCTCTGCTaGTCTGGACATTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: EVLLSEQHLASLISYRWEPQGLC*SGHSPR
Trigger: CCTTGGAGAATGTCCAGAGCAGCAGAGGCCCTGAGG...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGTCTACTTTGACCAGCTaGCATTCAGAGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRSTLTS*HSERWL
Trigger: CAGCCACCGCTCTGAATGGCAGCTGGTCAAAGTAGA...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCACCGCCACCAGGATGTaGTGGCCTGGAACCCCTGTG +
Preference number: 4 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILTATRM*WPGTPV
Trigger: CACAGGGGTTCCAGGCCAGCACATCCTGGTGGCGGT...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAAGAGCACCTGTACACTaGCCCTCCAGACATGTTCTC +
Preference number: 4 (lower is better)
Translates to: QQIPALALKAEWRVLLFARAPVH*PSRHVL
Trigger: GAGAACATGTCTGGAGGGGCAGTGTACAGGTGCTCT...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR GCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGGAGTAGGGAAAGCTaGAAGGGGAGGCAATCATGG +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRRSRES*KGRQSW
Trigger: CCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCT...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CCA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGATGCAGCAAGGTCCATaGGCACAGAAGCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKMQQGP*AQKLAC
Trigger: GCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCAT...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTAGTAGGTATGGGGTATaGATCCAGAATCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASSRYGV*IQNLDL
Trigger: GAGATCCAGATTCTGGATCCATACCCCATACCTACT...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCACAGTCTGAGGGACATTaGGCCTGCTTTCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: QQIPALALKAEWRVLLFAQSEGH*ACFQSD
Trigger: GTCACTCTGAAAGCAGGCCCAATGTCCCTCAGACTG...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGATTCAGAGCGGTGGCTaGAGTGTCCAAACACTGTCA +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRIQSGG*SVQTLS
Trigger: TGACAGTGTTTGGACACTTCAGCCACCGCTCTGAAT...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGCAAAGTCCACTTGGATaGGTGTCCGCTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLQSPLG*VSAEHH
Trigger: GTGATGTTCAGCGGACACTCATCCAAGTGGACTTTG...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTTCTGATAGACGTGTTTaGTCCCATCTTCCATGGAGC +
Preference number: 4 (lower is better)
Translates to: YCAPADPRFGVEGGVACLSDRRV*SHLPWS
Trigger: GCTCCATGGAAGATGGGATCAAACACGTCTATCAGA...AAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGTGCTTCCCTCCAAGGTaGTCAAAGGCTCCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKCFPPR*SKAPCC
Trigger: ACAACACGGAGCCTTTGATCACCTTGGAGGGAAGCA...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTGTACTGAGTTTTGGTTaGGCGTGTGGATCAGCAATT +
Preference number: 4 (lower is better)
Translates to: APADPRFGVEGGVACLALVLSFG*ACGSAI
Trigger: AATTGCTGATCCACACGCTCAACCAAAACTCAGTAC...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATCCCCGCTTTGGCGTTaGAGGCGGAGTGGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: NNEVLLSEQHLASLISYRSPLWR*RRSGVS
Trigger: AGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGA...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTAAAACTGAGAACAGTTaGAGGACAACTTACTTGGGG +
Preference number: 4 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASKTENS*RTTYLG
Trigger: CCCCAAGTAAGTTGTCCTTCAACTGTTCTCAGTTTT...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATGGATCCTGGAGATGCTaGATCTCTAGCTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: ADPRFGVEGGVACLALCNGSWRC*ISSWPS
Trigger: AGATGGCCAGCTAGAGATTCAGCATCTCCAGGATCC...ATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR TCA 90 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGGCCTGCTTTCAGAGTaGCTGACTGGACTGATCATC +
Preference number: 4 (lower is better)
Translates to: IPALALKAEWRVLLFAIGGLLSE*LTGLII
Trigger: GATGATCAGTCCAGTCAGTCACTCTGAAAGCAGGCC...TCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGACTCCTTAGTTCAGTCTaGGGGACATTGGGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: IPALALKAEWRVLLFAIGLLSSV*GTLGLL
Trigger: AAGCAGGCCCAATGTCCCTCAGACTGAACTAAGGAG...TCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCTCCTTAGTTCAGTCTaGGGGACATTGGGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: ADPRFGVEGGVACLALCNLLSSV*GTLGLL
Trigger: AAGCAGGCCCAATGTCCCTCAGACTGAACTAAGGAG...ATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTTCCGTGTCCGGCGCCTaGAGCAAACGCCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVSVSGA*SKRQSL
Trigger: CAGAGACTGGCGTTTGCTGCAGGCGCCGGACACGGA...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTCCCTTACGCCATCAGTaGAATTATTGGAAACCACCT +
Preference number: 4 (lower is better)
Translates to: APADPRFGVEGGVACLALPLRHQ*NYWKPP
Trigger: AGGTGGTTTCCAATAATTGCACTGATGGCGTAAGGG...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGCGGTCACACGGAAAATaGCCACGTTCTGATAGACGT +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRRSHGK*PRSDRR
Trigger: ACGTCTATCAGAACGTGGGCATTTTCCGTGTGACCG...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAAGAGACAGGTGCACGTaGTCCAAGGGACAAGTTACA +
Preference number: 4 (lower is better)
Translates to: QQIPALALKAEWRVLLFARDRCT*SKGQVT
Trigger: TGTAACTTGTCCCTTGGAGCACGTGCACCTGTCTCT...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGACCGCCACCAGGATGTaGTGGCCTGGAACCCCTGTG +
Preference number: 4 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVTATRM*WPGTPV
Trigger: CACAGGGGTTCCAGGCCAGCACATCCTGGTGGCGGT...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCAGGTCCGTTTCTGACATaGTTTGCCTCCCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPGPFLT*FASLPP
Trigger: GGGAGGCAGGGAGGCAAAGCATGTCAGAAACGGACC...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGGGCACTTCTGCGGTTTaGCAGTGTACTGTTCCCTTA +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRGTSAV*QCTVPL
Trigger: TAAGGGAACAGTACACTGCCAAACCGCAGAAGTGCC...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAGGCACTTCTGCGGTTTaGCAGTGTACTGTTCCCTTA +
Preference number: 4 (lower is better)
Translates to: QQIPALALKAEWRVLLFAGTSAV*QCTVPL
Trigger: TAAGGGAACAGTACACTGCCAAACCGCAGAAGTGCC...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTCCTCATATACTGCGATaGTCTTTGTGTCTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASPHILR*SLCLVG
Trigger: TCCTACAAGACACAAAGACCATCGCAGTATATGAGG...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTGTAGTCATCCAGGTTTaGAGAAAAGGACAAGCGAAG +
Preference number: 4 (lower is better)
Translates to: APADPRFGVEGGVACLALVVIQV*RKGQAK
Trigger: CTTCGCTTGTCCTTTTCTCCAAACCTGGATGACTAC...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGAAGGACTCGGACTCCTaGCTTCAGCTCGAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKKDSDS*LQLEVY
Trigger: GTACACTTCGAGCTGAAGCCAGGAGTCCGAGTCCTT...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTGTGAAGACAGGACAATaGGTAACTAATGGGATTCCA +
Preference number: 4 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASVKTGQ*VTNGIP
Trigger: TGGAATCCCATTAGTTACCCATTGTCCTGTCTTCAC...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
3UTR CAA 72 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTaGCTCTTTGCAATCGGAGAGATGAGTCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: IPALALKAEWRV*LFAIGEMSHQV
Trigger: AACCTGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCTCCAAGGCCAGGGTaGAGTAGACACCACGTGTGT +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDESPRPG*SRHHVC
Trigger: ACACACGTGGTGTCTACTTCACCCTGGCCTTGGAGA...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATACCAGGACTCCACCTTaGTCCAGGTACAAAACACTG +
Preference number: 4 (lower is better)
Translates to: ADPRFGVEGGVACLALCNTRTPP*SRYKTL
Trigger: CAGTGTTTTGTACCTGGATCAAGGTGGAGTCCTGGT...ATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGACCAGGACTCCACCTTaGTCCAGGTACAAAACACTG +
Preference number: 4 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKTRTPP*SRYKTL
Trigger: CAGTGTTTTGTACCTGGATCAAGGTGGAGTCCTGGT...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCAAAGTCCACTTGGATaGGTGTCCGCTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: ADPRFGVEGGVACLALCNQSPLG*VSAEHH
Trigger: GTGATGTTCAGCGGACACTCATCCAAGTGGACTTTG...ATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGCTGAGACCTGCACTGTaGTGGTATTCATTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLLRPAL*WYSFLL
Trigger: CAGAAGGAATGAATACCATCACAGTGCAGGTCTCAG...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGGTGGATCAGCAATTCTaGTATCTGCTCCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRVDQQF*YLLQVI
Trigger: GATGACCTGGAGCAGATATCAGAATTGCTGATCCAC...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAGGGGCCGCTGTTAAGTaGGCAGCATGGACAAGGACT +
Preference number: 4 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSGAAVK*AAWTRT
Trigger: AGTCCTTGTCCATGCTGCTCACTTAACAGCGGCCCC...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGCCCCACAAACACCACTaGGAGCAGCATCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGPHKHH*EQHQHG
Trigger: GCCATGCTGATGCTGCTCTCAGTGGTGTTTGTGGGG...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGGGGCTCAGAAACTTGTaGGTAGTGGGGGCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSEGLRNL*VVGAGA
Trigger: CGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCC...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCATGCTCCCATGATACATaGTTCCCCCTGGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPCSHDT*FPLAVQ
Trigger: CTGCACAGCCAGGGGGAAGCATGTATCATGGGAGCA...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGGCAGGCACTGGCCATTaGTGTGTCGCTCATAACCAT +
Preference number: 4 (lower is better)
Translates to: EVLLSEQHLASLISYRWEAGTGH*CVAHNH
Trigger: ATGGTTATGAGCGACACAGCAATGGCCAGTGCCTGC...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATTTCCCTGGGCACTTCTaGGGTTTGGCAGTGTACTGT +
Preference number: 4 (lower is better)
Translates to: RFGVEGGVACLALCNRRDFPGHF*GLAVYC
Trigger: ACAGTACACTGCCAAACCGCAGAAGTGCCCAGGGAA...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp TACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTTCACCCTCTTCTAATTaGACCATGAGAGTGACGTTG +
Preference number: 4 (lower is better)
Translates to: YCAPADPRFGVEGGVACLSPSSN*TMRVTL
Trigger: CAACGTCACTCTCATGGTGCAATTAGAAGAGGGTGA...AAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp GCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATAGACTGTTGTCCACCTaGACGGTCACACGGAAAATG +
Preference number: 4 (lower is better)
Translates to: ADPRFGVEGGVACLALCNRLLST*TVTRKM
Trigger: CATTTTCCGTGTGACCGTGCAGGTGGACAACAGTCT...ATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGAGACTGTTGTCCACCTaGACGGTCACACGGAAAATG +
Preference number: 4 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKRLLST*TVTRKM
Trigger: CATTTTCCGTGTGACCGTGCAGGTGGACAACAGTCT...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCATTAAATTGCATACTGTaGCCCAGCAGATCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: QQIPALALKAEWRVLLFALNCIL*PSRSPL
Trigger: AAGCGGGGATCTGCTGGGGCACAGTATGCAATTTAA...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCGGTCCGTTTCTGACATaGTTTGCCTCCCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILGPFLT*FASLPP
Trigger: GGGAGGCAGGGAGGCAAAGCATGTCAGAAACGGACC...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTAGGAGGAAATTGCCCTaGGAAATTGTCACACATTCA +
Preference number: 4 (lower is better)
Translates to: APADPRFGVEGGVACLALRRKLP*EIVTHS
Trigger: TGAATGTGTGACAATTTCGCAGGGCAATTTCCTCCT...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR GCA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGCTACAAATAGGTGACTaGCTCAGGCCTAGCCCATTT +
Preference number: 4 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLLQIGD*LRPSPF
Trigger: AAATGGGCTAGGCCTGAGGCAGTCACCTATTTGTAG...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTAGAACATGCACAGTTTaGCTTCTGGGATTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASRTCTV*LLGFWK
Trigger: TTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCT...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAAGGCTGATTCCTGTTaGCCTCTGTACAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRKADSC*PLYSSA
Trigger: TGCAGAACTGTACAGAGGCCAACAGGAATCAGCCTT...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CCA 90 bp TACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTTTCGGAAGCTTCATTTaGGCAAATGCATTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: YCAPADPRFGVEGGVACLFGSFI*ANAFLR
Trigger: CCGAAGGAATGCATTTGCCCAAATGAAGCTTCCGAA...AAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAATGCCGGCAGGCACTaGCCATTGCTGTGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILNAGRH*PLLCRS
Trigger: TGAGCGACACAGCAATGGCCAGTGCCTGCCGGCATT...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCGGGTGCCCACTTGGCTaGGCCACAGCACTGCCGTCG +
Preference number: 4 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSGCPLG*ATALPS
Trigger: CGACGGCAGTGCTGTGGCCCAGCCAAGTGGGCACCC...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp ATACCCTGTTGGCTTAGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGGCCACCAGGATGTGCTaGCCTGGAACCCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: IPCWLRDIAKKEAEHTKRATRMC*PGTPVA
Trigger: AGCCACAGGGGTTCCAGGCCAGCACATCCTGGTGGC...CCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCTAAGCCAACAGGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTAAGTGTACTGAGTTTTaGTTGAGCGTGTGGATCAGC +
Preference number: 4 (lower is better)
Translates to: YCAPADPRFGVEGGVACLKCTEF*LSVWIS
Trigger: GCTGATCCACACGCTCAACCAAAACTCAGTACACTT...AAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGAGATCCACTGTGGGTTaGAGTGAGGTCCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGRSTVG*SEVHQG
Trigger: CCCCTGGTGGACCTCACTCCAACCCACAGTGGATCT...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATAGAGCAGCATCAGCATaGCAGATCCACTGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: RFGVEGGVACLALCNRRDRAASA*QIHCGL
Trigger: CAACCCACAGTGGATCTGCCATGCTGATGCTGCTCT...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAATTTCCTACTGCAGTTaGGGCAGGAGTAGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: IPALALKAEWRVLLFAIGISYCS*GRSRES
Trigger: GCTTTCCCTACTCCTGCCCCAACTGCAGTAGGAAAT...TCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGATGCAGCAAGGTCCATaGGCACAGAAGCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDEMQQGP*AQKLAC
Trigger: GCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCAT...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CCA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAGCTCAGTTGGATTCCTaGAAAACACAGAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: QQIPALALKAEWRVLLFAAQLDS*KTQNSC
Trigger: GCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGAGC...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612154.4
3UTR CAA 72 bp CTTAAATTGCATACTGTGCCCCAGCAGATCCCCGCTTaGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LKLHTVPQQIPA*ALKAEWRVLLF
Trigger: AAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTATGCAATTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCTCTCCAAGGCCAGGGTaGAGTAGACACCACGTGTGT +
Preference number: 4 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILSPRPG*SRHHVC
Trigger: ACACACGTGGTGTCTACTTCACCCTGGCCTTGGAGA...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGCTGGCAATGATCCCTaGTGTGTAGGGATTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RFGVEGGVACLALCNRRDAGNDP*CVGILR
Trigger: TCTGAGAATCCCTACACATCAGGGATCATTGCCAGC...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATTGTCTTTGCTGGCAATaGTCCCTGATGTGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: ADPRFGVEGGVACLALCNCLCWQ*SLMCRD
Trigger: ATCCCTACACATCAGGGATCATTGCCAGCAAAGACA...ATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp TACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTAGAACCTATATTACCTaGTGCCACTATGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: YCAPADPRFGVEGGVACLRTYIT*CHYDAW
Trigger: CCAAGCATCATAGTGGCATCAGGTAATATAGGTTCT...AAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGGTGTTCCCTGCATCTaGAGAGACAAACATGCTGAT +
Preference number: 4 (lower is better)
Translates to: IPALALKAEWRVLLFAIGGVPCI*RDKHAD
Trigger: ATCAGCATGTTTGTCTCTTCAGATGCAGGGAACACC...TCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAACTTGTAATCTACTTTaGCCAGCTGCCATTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QQIPALALKAEWRVLLFATCNLL*PAAIQS
Trigger: GCTCTGAATGGCAGCTGGTCAAAGTAGATTACAAGT...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGATGTACCCAGTACTATTaGGGTAACTCTGTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: IPALALKAEWRVLLFAIGCTQYY*GNSVPS
Trigger: GCTTGGGACAGAGTTACCTCAATAGTACTGGGTACA...TCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATTCTGATAGACGTGTTTaGTCCCATCTTCCATGGAGC +
Preference number: 4 (lower is better)
Translates to: ADPRFGVEGGVACLALCNSDRRV*SHLPWS
Trigger: GCTCCATGGAAGATGGGATCAAACACGTCTATCAGA...ATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCAGCACTGCCGTCGCATTaGCCTCTTTGTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPALPSH*PLCSLW
Trigger: CCACAAAGAACAAAGAGGTCAATGCGACGGCAGTGC...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAAGGGGCCGCTGTTAAGTaGGCAGCATGGACAAGGACT +
Preference number: 4 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKGAAVK*AAWTRT
Trigger: AGTCCTTGTCCATGCTGCTCACTTAACAGCGGCCCC...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATTTGCAATCGGAGAGATaGGTCACCAGGTTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: ADPRFGVEGGVACLALCNLQSER*VTRLSR
Trigger: TCTACTCAACCTGGTGACTCATCTCTCCGATTGCAA...ATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCACCAAGGTCCGTTTCTaGCATGCTTTGCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILTKVRF*HALPPC
Trigger: GCAGGGAGGCAAAGCATGTCAGAAACGGACCTTGGT...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGCTGTGCTGGTTTGAGTaGGCCTCTTTTGATTTTCCA +
Preference number: 4 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLLCWFE*ASFDFP
Trigger: TGGAAAATCAAAAGAGGCTCACTCAAACCAGCACAG...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGCCAGGTACCACACTTTaGGAACAACTGGCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDEPGTTL*EQLAKV
Trigger: GACCTTGGCCAGTTGTTCTCAAAGTGTGGTACCTGG...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR GCA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGTCGGTGCTGATAACATaGATGTCCTTGGGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKSVLIT*MSLGKA
Trigger: TGCTTTGCCCAAGGACATGCATGTTATCAGCACCGA...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTTCCCTGGGCACTTCTaGGGTTTGGCAGTGTACTGT +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDEFPGHF*GLAVYC
Trigger: ACAGTACACTGCCAAACCGCAGAAGTGCCCAGGGAA...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGAGAGACAGGTGCACGTaGTCCAAGGGACAAGTTACA +
Preference number: 4 (lower is better)
Translates to: EVLLSEQHLASLISYRWERDRCT*SKGQVT
Trigger: TGTAACTTGTCCCTTGGAGCACGTGCACCTGTCTCT...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCAAAGGGAAGAGACAGGTaGACGTGCTCCAAGGGACAA +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPKGRDR*TCSKGQ
Trigger: TTGTCCCTTGGAGCACGTGCACCTGTCTCTTCCCTT...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCACGGAGTGGCGTGTCTTaGTCTTTGCAATCGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPRSGVS*SLQSER
Trigger: TCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCG...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTAGAGTATTGTCCACATaGACAGGCTTAAAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASRVLST*TGLKLK
Trigger: TTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCT...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGGGTCACTTCCCAAAATaGCAGGTATCTCATGTCGAC +
Preference number: 4 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKGHFPK*QVSHVD
Trigger: GTCGACATGAGATACCTGGCATTTTGGGAAGTGACC...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTCCAGTCTTCTTGTTTaGGGTGAAAAAGCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: APADPRFGVEGGVACLALSSLLV*GEKASF
Trigger: AAAGCTTGCTTTTTCACCCCAAACAAGAAGACTGGA...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CCA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGAATGCCGGCAGGCACTaGCCATTGCTGTGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGNAGRH*PLLCRS
Trigger: TGAGCGACACAGCAATGGCCAGTGCCTGCCGGCATT...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTTTTGGTTGAGCGTGTaGATCAGCAATTCTGATATC +
Preference number: 4 (lower is better)
Translates to: APADPRFGVEGGVACLALFWLSV*ISNSDI
Trigger: GATATCAGAATTGCTGATCCACACGCTCAACCAAAA...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGAAGGACTCGGACTCCTaGCTTCAGCTCGAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDEKDSDS*LQLEVY
Trigger: GTACACTTCGAGCTGAAGCCAGGAGTCCGAGTCCTT...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGATGGCAGATCCACTGTaGGTTGGAGTGAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGMADPL*VGVRST
Trigger: GGTGGACCTCACTCCAACCCACAGTGGATCTGCCAT...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGGCACAGTTTGCCTTCTaGGATTTTGGAAAACGTTGC +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRAQFAF*DFGKRC
Trigger: GCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGC...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CCA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGAAAGTGTTGCTTGGGTaGTTCAGGGTAGAACATGCA +
Preference number: 4 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLKVLLG*FRVEHA
Trigger: TGCATGTTCTACCCTGAACCACCCAAGCAACACTTT...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGCAGTCTGAGGGACATTaGGCCTGCTTTCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDEQSEGH*ACFQSD
Trigger: GTCACTCTGAAAGCAGGCCCAATGTCCCTCAGACTG...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCATTCTCATCTATAAGCTaGCCAGGCCTCCTTAGTTCA +
Preference number: 4 (lower is better)
Translates to: QQIPALALKAEWRVLLFAFSSIS*PGLLSS
Trigger: TGAACTAAGGAGGCCTGGCCAGCTTATAGATGAGAA...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGAAAGCGAGCTCTCTGTaGTGCTCCCCAGGTTATAGT +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDEKASSL*CSPGYS
Trigger: ACTATAACCTGGGGAGCATCACAGAGAGCTCGCTTT...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR TCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGAATGTGGCCGCCCTCCTaGTGTCAGCTGAACAAACAC +
Preference number: 4 (lower is better)
Translates to: NNEVLLSEQHLASLISYRMWPPS*CQLNKH
Trigger: GTGTTTGTTCAGCTGACATCAGGAGGGCGGCCACAT...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACTCTCCAAGGCCAGGGTaGAGTAGACACCACGTGTGT +
Preference number: 4 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINSPRPG*SRHHVC
Trigger: ACACACGTGGTGTCTACTTCACCCTGGCCTTGGAGA...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGAGAACCTATATTACCTaGTGCCACTATGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLRTYIT*CHYDAW
Trigger: CCAAGCATCATAGTGGCATCAGGTAATATAGGTTCT...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCAATTCAGAGCGGTGGCTaGAGTGTCCAAACACTGTCA +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPIQSGG*SVQTLS
Trigger: TGACAGTGTTTGGACACTTCAGCCACCGCTCTGAAT...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTCATACACTTCCGCTCTaGTTTTCGCTTCTTATATAT +
Preference number: 4 (lower is better)
Translates to: APADPRFGVEGGVACLALHTLPL*FSLLIY
Trigger: ATATATAAGAAGCGAAAATCAGAGCGGAAGTGTATG...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGTGTACCCAGTACTATTaGGGTAACTCTGTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: EVLLSEQHLASLISYRWECTQYY*GNSVPS
Trigger: GCTTGGGACAGAGTTACCTCAATAGTACTGGGTACA...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCACAAAGTCCACTTGGATaGGTGTCCGCTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPQSPLG*VSAEHH
Trigger: GTGATGTTCAGCGGACACTCATCCAAGTGGACTTTG...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCACAGCTCGAAGTGTACTaGGTTTTGGTTGAGCGTGTG +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPQLEVY*VLVERV
Trigger: CACACGCTCAACCAAAACTCAGTACACTTCGAGCTG...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGTTGCAATCGGAGAGATaGGTCACCAGGTTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: EVLLSEQHLASLISYRWELQSER*VTRLSR
Trigger: TCTACTCAACCTGGTGACTCATCTCTCCGATTGCAA...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAATAAACATCTCTGCCTaGCAAACTTCTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: IPALALKAEWRVLLFAIGINISA*QTSDSS
Trigger: GCTGCTGTCAGAAGTTTGTCAGGCAGAGATGTTTAT...TCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR GCA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGCCTCAGGGCCTCTGCTaGTCTGGACATTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSEPQGLC*SGHSPR
Trigger: CCTTGGAGAATGTCCAGAGCAGCAGAGGCCCTGAGG...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACTGCTCCCATGATACATaGTTCCCCCTGGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINCSHDT*FPLAVQ
Trigger: CTGCACAGCCAGGGGGAAGCATGTATCATGGGAGCA...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGGCAGGCACTGGCCATTaGTGTGTCGCTCATAACCAT +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGAGTGH*CVAHNH
Trigger: ATGGTTATGAGCGACACAGCAATGGCCAGTGCCTGC...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATAACTCTGTCCCAAGCTaGAATCCTTTGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RFGVEGGVACLALCNRRDNSVPS*NPLTER
Trigger: CCTCTCTGTCAAAGGATTGCAGCTTGGGACAGAGTT...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGTTCCCTGGGCACTTCTaGGGTTTGGCAGTGTACTGT +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGFPGHF*GLAVYC
Trigger: ACAGTACACTGCCAAACCGCAGAAGTGCCCAGGGAA...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAAGCAATTCTGATATCTaGTCCAGGTCATCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: QQIPALALKAEWRVLLFASNSDI*SRSSVD
Trigger: GTCAACTGATGACCTGGAGCAGATATCAGAATTGCT...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGGTAGATGACGAACACTaGCAGCCCCACAAACACCAC +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGVDDEH*QPHKHH
Trigger: GTGGTGTTTGTGGGGCTGGCAGTGTTCGTCATCTAC...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAGTAGATGACGAACACTaGCAGCCCCACAAACACCAC +
Preference number: 4 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSVDDEH*QPHKHH
Trigger: GTGGTGTTTGTGGGGCTGGCAGTGTTCGTCATCTAC...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACTGTGGCCACAGAGAGTaGAGAAAGCAGCCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINCGHRE*RKQPCG
Trigger: GCCACAAGGCTGCTTTCTGCACTCTCTGTGGCCACA...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCACATGAAACTGAACCCTaGTGTGCAGGATGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPHETEP*CAGCSK
Trigger: CTTGCTGCATCCTGCACAGCAGGGTTCAGTTTCATG...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGGGTACAACCCCTTCTTaGATAAGCTGCCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: EVLLSEQHLASLISYRWEGTTPS*ISCHLL
Trigger: GAGAAGATGGCAGCTTATCCAAGAAGGGGTTGTACC...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTAACAATCAAAGAGTCTaGGTCAATGTAGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: YCAPADPRFGVEGGVACLNNQRV*VNVAWK
Trigger: TTTCCAGGCTACATTGACCCAGACTCTTTGATTGTT...AAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTGCCATTCAGAGCGGTaGCTGAAGTGTCCAAACACT +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDECHSER*LKCPNT
Trigger: AGTGTTTGGACACTTCAGCCACCGCTCTGAATGGCA...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTCCGCGGGGCTTTCCCTaGGCACTTCTGCGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLPRGFP*ALLRFG
Trigger: GCCAAACCGCAGAAGTGCCCAGGGAAAGCCCCGCGG...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGGTGAGGGTGCCCACTTaGCTGGGCCACAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKVRVPT*LGHSTA
Trigger: GGCAGTGCTGTGGCCCAGCCAAGTGGGCACCCTCAC...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACGTGAGGGTGCCCACTTaGCTGGGCCACAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNVRVPT*LGHSTA
Trigger: GGCAGTGCTGTGGCCCAGCCAAGTGGGCACCCTCAC...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGCAAAGAGTTCAGCAGTaGTGGGTAAGCCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGQRVQQ*WVSQGA
Trigger: TGCTCCCTGGCTTACCCACCACTGCTGAACTCTTTG...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGAGATCCACTGTGGGTTaGAGTGAGGTCCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSERSTVG*SEVHQG
Trigger: CCCCTGGTGGACCTCACTCCAACCCACAGTGGATCT...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAAATGGCAGATCCACTGTaGGTTGGAGTGAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKMADPL*VGVRST
Trigger: GGTGGACCTCACTCCAACCCACAGTGGATCTGCCAT...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGTCGCCTGTAGCCTTTaGGGGTTTTCCTTAAATTGC +
Preference number: 4 (lower is better)
Translates to: RFGVEGGVACLALCNRRDVACSL*GFSLNC
Trigger: GCAATTTAAGGAAAACCCCCAAAGGCTACAGGCGAC...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTAATGGCCTAGTACAATaGTTCTCAAACTTTAGTATG +
Preference number: 4 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASNGLVQ*FSNFSM
Trigger: CATACTAAAGTTTGAGAACCATTGTACTAGGCCATT...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGGAGATTCAGCTGGAATaGCCTAGTACAATGGTTCTC +
Preference number: 4 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKEIQLE*PSTMVL
Trigger: GAGAACCATTGTACTAGGCCATTCCAGCTGAATCTC...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCATTCAGAGTGACTGACTaGACTGATCATCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QQIPALALKAEWRVLLFAFRVTD*TDHLLF
Trigger: GAACAAGAGATGATCAGTCCAGTCAGTCACTCTGAA...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTACCTGATGCCACTATaGTGCTTGGAGCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDEYLMPL*CLELCL
Trigger: AAGACACAGCTCCAAGCATCATAGTGGCATCAGGTA...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAAGAGACAAACATGCTaGTGTCAGTGTCTGACAATT +
Preference number: 4 (lower is better)
Translates to: DPRFGVEGGVACLALCNRKRQTC*CQCLTI
Trigger: AATTGTCAGACACTGACATCAGCATGTTTGTCTCTT...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp TACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTCATACACTTCCGCTCTaGTTTTCGCTTCTTATATAT +
Preference number: 4 (lower is better)
Translates to: YCAPADPRFGVEGGVACLHTLPL*FSLLIY
Trigger: ATATATAAGAAGCGAAAATCAGAGCGGAAGTGTATG...AAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCATGTACCCAGTACTATTaGGGTAACTCTGTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPCTQYY*GNSVPS
Trigger: GCTTGGGACAGAGTTACCTCAATAGTACTGGGTACA...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACGCTTTCCATCAGCCGTaGCTATCCGCAGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDAFHQP*LSAAPA
Trigger: CGCGGGGGCTGCGGATAGTCACGGCTGATGGAAAGC...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGAGCACTGCCGTCGCATTaGCCTCTTTGTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: NNEVLLSEQHLASLISYRALPSH*PLCSLW
Trigger: CCACAAAGAACAAAGAGGTCAATGCGACGGCAGTGC...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGTGCTTCCCTCCAAGGTaGTCAAAGGCTCCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGCFPPR*SKAPCC
Trigger: ACAACACGGAGCCTTTGATCACCTTGGAGGGAAGCA...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGTACTGAGTTTTGGTTaGGCGTGTGGATCAGCAATT +
Preference number: 4 (lower is better)
Translates to: RFGVEGGVACLALCNRRDVLSFG*ACGSAI
Trigger: AATTGCTGATCCACACGCTCAACCAAAACTCAGTAC...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGTCCCCGCTTTGGCGTTaGAGGCGGAGTGGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKSPLWR*RRSGVS
Trigger: AGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGA...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTGGGCTCAGAAACTTGTaGGTAGTGGGGGCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSGLRNL*VVGAGA
Trigger: CGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCC...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAATCTACTTTGACCAGCTaGCATTCAGAGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKSTLTS*HSERWL
Trigger: CAGCCACCGCTCTGAATGGCAGCTGGTCAAAGTAGA...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAGACTGTTGTCCACCTaGACGGTCACACGGAAAATG +
Preference number: 4 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILRLLST*TVTRKM
Trigger: CATTTTCCGTGTGACCGTGCAGGTGGACAACAGTCT...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCAGCGTGTCTTGCTCTTTaGAATCGGAGAGATGAGTCA +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPACLAL*NRRDES
Trigger: TGACTCATCTCTCCGATTGCAAAGAGCAAGACACGC...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCATTAAATTGCATACTGTaGCCCAGCAGATCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPLNCIL*PSRSPL
Trigger: AAGCGGGGATCTGCTGGGGCACAGTATGCAATTTAA...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGACCCTGCTGTGCAGGATaGAGCAAGGTCCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGPCCAG*SKVHGH
Trigger: GTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGG...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTTGTGTCTTGTAGGATaGCATTCCCAGCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDELCLVG*HSQLRP
Trigger: AGGTCTCAGCTGGGAATGCCATCCTACAAGACACAA...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATAGATCCACTGTGGGTTaGAGTGAGGTCCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYRSTVG*SEVHQG
Trigger: CCCCTGGTGGACCTCACTCCAACCCACAGTGGATCT...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GCAGTTGGGGCAGGAGTAGGGAAAGCTGCAAGGGGAGGCAATCATGGTGGAAAGAGAAGCTGGCATGCTTaGGAATGTACAAAACTGACA +
Preference number: 4 (lower is better)
Translates to: AVGAGVGKAARGGNHGGKRSWHA*ECTKLT
Trigger: TGTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCT...CTTTCCACCATGATTGCCTCCCCTTGCAGCTTTCCCTACTCCTGCCCCAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGCTAATCTCCTACAGATaGGAGGGAGCTTTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDELISYR*EGALRR
Trigger: TCTCCTCAAAGCTCCCTCCCATCTGTAGGAGATTAG...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CCA 90 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGATTCAGAGTGACTGACTaGACTGATCATCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: IPALALKAEWRVLLFAIGFRVTD*TDHLLF
Trigger: GAACAAGAGATGATCAGTCCAGTCAGTCACTCTGAA...TCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTACCAGGACTCCACCTTaGTCCAGGTACAAAACACTG +
Preference number: 4 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVTRTPP*SRYKTL
Trigger: CAGTGTTTTGTACCTGGATCAAGGTGGAGTCCTGGT...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGTGGATGAGTGTCCGCTaGACATCACCCTCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGWMSVR*TSPSSN
Trigger: ATTAGAAGAGGGTGATGTTCAGCGGACACTCATCCA...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGACCACCACACGTAAGTaGGGGTGCCCACTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKTTTRK*GCPLGW
Trigger: CCAGCCAAGTGGGCACCCTCACTTACGTGTGGTGGT...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGCTCCAGGTCATCAGTTaGCCTTTTGTTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGLQVIS*PFVFSS
Trigger: GCTGGAGAAAACAAAAGGTCAACTGATGACCTGGAG...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGGTGGATCAGCAATTCTaGTATCTGCTCCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGVDQQF*YLLQVI
Trigger: GATGACCTGGAGCAGATATCAGAATTGCTGATCCAC...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGACCCCACAAACACCACTaGGAGCAGCATCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGPHKHH*EQHQHG
Trigger: GCCATGCTGATGCTGCTCTCAGTGGTGTTTGTGGGG...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGAAAGCTACTCTCCTATaGGCTGGGATTCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGKATLL*AGIPPS
Trigger: AGAAGGTGGAATCCCAGCTCATAGGAGAGTAGCTTT...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCACTTCATTTGGGCAAATaGATTCCTTCGGTAGGACAC +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPLHLGK*IPSVGH
Trigger: GTGTCCTACCGAAGGAATGCATTTGCCCAAATGAAG...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR GCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGCATTCCCTTTATCCCTaGTACCTCATAGAGGTCGAT +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDEHSLYP*YLIEVD
Trigger: ATCGACCTCTATGAGGTAGCAGGGATAAAGGGAATG...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATCCTGCATATTTTCCTTaGATACACTTCCGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: RFGVEGGVACLALCNRRDPAYFP*IHFRSD
Trigger: ATCAGAGCGGAAGTGTATGCAAGGAAAATATGCAGG...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGAACTCTGTCCCAAGCTaGAATCCTTTGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGNSVPS*NPLTER
Trigger: CCTCTCTGTCAAAGGATTGCAGCTTGGGACAGAGTT...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCGCTGGGCCACAGCACTaGCGTCGCATTGACCTCTTT +
Preference number: 4 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSAGPQH*RRIDLF
Trigger: AAAGAGGTCAATGCGACGGCAGTGCTGTGGCCCAGC...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGGATTCCATTTCCTACTaGAGTTGGGGCAGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGDSISY*SWGRSR
Trigger: CCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATC...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAACATGAAACTGAACCCTaGTGTGCAGGATGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKHETEP*CAGCSK
Trigger: CTTGCTGCATCCTGCACAGCAGGGTTCAGTTTCATG...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGGTCACAGGAGGAAATTaGCCTGCGAAATTGTCACAC +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGVTGGN*PAKLSH
Trigger: GTGTGACAATTTCGCAGGGCAATTTCCTCCTGTGAC...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGTTGCTATTCTTTCTGTaGCTGAACTACATGAAGTCA +
Preference number: 4 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLLLFFL*LNYMKS
Trigger: TGACTTCATGTAGTTCAGGCACAGAAAGAATAGCAA...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATCCTCATATACTGCGATaGTCTTTGTGTCTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: RFGVEGGVACLALCNRRDPHILR*SLCLVG
Trigger: TCCTACAAGACACAAAGACCATCGCAGTATATGAGG...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGCAGGATGTGCTGGCCTaGAACCCCTGTGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKQDVLA*NPCGFH
Trigger: GTGGAAGCCACAGGGGTTCCAGGCCAGCACATCCTG...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCGTCGCCTGTAGCCTTTaGGGGTTTTCCTTAAATTGC +
Preference number: 4 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILVACSL*GFSLNC
Trigger: GCAATTTAAGGAAAACCCCCAAAGGCTACAGGCGAC...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGACATGGGCACAGAAGCTaGCATGCTTGGGAATGTACA +
Preference number: 4 (lower is better)
Translates to: NNEVLLSEQHLASLISYRHGHRS*HAWECT
Trigger: TGTACATTCCCAAGCATGCCAGCTTCTGTGCCCATG...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCCTAATCTCCTACAGATaGGAGGGAGCTTTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILLISYR*EGALRR
Trigger: TCTCCTCAAAGCTCCCTCCCATCTGTAGGAGATTAG...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
3UTR CAA 72 bp ATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTaGGGAATGTACAAAACTGACAAAGGGCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: MQQGPWAQKLAC*GMYKTDKGLRN
Trigger: GTTTCTGAGCCCTTTGTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCACAATCTCCGGGTCTGTaGGTAACATTATCTTACGCT +
Preference number: 4 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSQSPGL*VTLSYA
Trigger: AGCGTAAGATAATGTTACTCACAGACCCGGAGATTG...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTACCTGATGCCACTATaGTGCTTGGAGCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVYLMPL*CLELCL
Trigger: AAGACACAGCTCCAAGCATCATAGTGGCATCAGGTA...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGAGAACCTATATTACCTaGTGCCACTATGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDERTYIT*CHYDAW
Trigger: CCAAGCATCATAGTGGCATCAGGTAATATAGGTTCT...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR TCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGAAGAGACAAACATGCTaGTGTCAGTGTCTGACAATT +
Preference number: 4 (lower is better)
Translates to: EVLLSEQHLASLISYRWEKRQTC*CQCLTI
Trigger: AATTGTCAGACACTGACATCAGCATGTTTGTCTCTT...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACGGTGTTCCCTGCATCTaGAGAGACAAACATGCTGAT +
Preference number: 4 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINGVPCI*RDKHAD
Trigger: ATCAGCATGTTTGTCTCTTCAGATGCAGGGAACACC...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAAGCTTTCCATCAGCCGTaGCTATCCGCAGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQAFHQP*LSAAPA
Trigger: CGCGGGGGCTGCGGATAGTCACGGCTGATGGAAAGC...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGTGGATGAGTGTCCGCTaGACATCACCCTCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGWMSVR*TSPSSN
Trigger: ATTAGAAGAGGGTGATGTTCAGCGGACACTCATCCA...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTCCCCACAAACACCACTaGGAGCAGCATCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLPHKHH*EQHQHG
Trigger: GCCATGCTGATGCTGCTCTCAGTGGTGTTTGTGGGG...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACTTGCAATCGGAGAGATaGGTCACCAGGTTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINLQSER*VTRLSR
Trigger: TCTACTCAACCTGGTGACTCATCTCTCCGATTGCAA...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAATTGGGAGACTCCAACTaGAGAGGATCAATGAGGATG +
Preference number: 4 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKLGDSN*RGSMRM
Trigger: CATCCTCATTGATCCTCTTCAGTTGGAGTCTCCCAA...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGATTGAACTGCAACTCTaGGGACTCCCTGTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSEIELQL*GLPVLV
Trigger: AACCAGCACAGGGAGTCCTCAGAGTTGCAGTTCAAT...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCATCACCCTCTTCTAATTaGACCATGAGAGTGACGTTG +
Preference number: 4 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSSPSSN*TMRVTL
Trigger: CAACGTCACTCTCATGGTGCAATTAGAAGAGGGTGA...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp ATACCCTGTTGGCTTAGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGAGAGACAGGTGCACGTaGTCCAAGGGACAAGTTACA +
Preference number: 4 (lower is better)
Translates to: IPCWLRDIAKKEAEHTKRRDRCT*SKGQVT
Trigger: TGTAACTTGTCCCTTGGAGCACGTGCACCTGTCTCT...CCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCTAAGCCAACAGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp ACTTGGGGTTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACAGCTGGGCCACAGCACTaGCGTCGCATTGACCTCTTT +
Preference number: 4 (lower is better)
Translates to: TWGLEGRDSKISTDHGHTAGPQH*RRIDLF
Trigger: AAAGAGGTCAATGCGACGGCAGTGCTGTGGCCCAGC...TGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAACCCCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGAGGTCACTTCCCAAAATaGCAGGTATCTCATGTCGAC +
Preference number: 4 (lower is better)
Translates to: NNEVLLSEQHLASLISYRGHFPK*QVSHVD
Trigger: GTCGACATGAGATACCTGGCATTTTGGGAAGTGACC...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGAGTTCAGGGTAGAACATaGACAGTTTGCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: NNEVLLSEQHLASLISYRVQGRT*TVCLLG
Trigger: TCCCAGAAGGCAAACTGTGCATGTTCTACCCTGAAC...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGAGCAAAGCAAACCTCTaGATTTTGGACAGTGAATCC +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDESKANL*ILDSES
Trigger: GGATTCACTGTCCAAAATGCAGAGGTTTGCTTTGCT...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR GCA 90 bp ATACCCTGTTGGCTTAGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGAAAACACAGAACAGCTaGCAAGCACCCCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: IPCWLRDIAKKEAEHTKRKTQNS*QAPHCS
Trigger: AGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTT...CCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCTAAGCCAACAGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp ATACCCTGTTGGCTTAGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTGCCATTCAGAGCGGTaGCTGAAGTGTCCAAACACT +
Preference number: 4 (lower is better)
Translates to: IPCWLRDIAKKEAEHTKRCHSER*LKCPNT
Trigger: AGTGTTTGGACACTTCAGCCACCGCTCTGAATGGCA...CCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCTAAGCCAACAGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCACATCAGTGCAATTATTaGAAACCACCTTCCTGTACC +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPHQCNY*KPPSCT
Trigger: GGTACAGGAAGGTGGTTTCCAATAATTGCACTGATG...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGGCTCAGTTGGATTCCTaGAAAACACAGAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGAQLDS*KTQNSC
Trigger: GCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGAGC...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp ATGTTTCCAGGTGGGAAAAGGCAGGGATATTTGAAAAAGGCAGGTTCTAGAGGAACCGCTGCGAACACCTaGTTCTCATCGGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: MFPGGKRQGYLKKAGSRGTAANT*FSSVLI
Trigger: TATCAGCACCGATGAGAATCAGGTGTTCGCAGCGGT...TCCTCTAGAACCTGCCTTTTTCAAATATCCCTGCCTTTTCCCACCTGGAAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGTGTCTTTGCTGGCAATaGTCCCTGATGTGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSECLCWQ*SLMCRD
Trigger: ATCCCTACACATCAGGGATCATTGCCAGCAAAGACA...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGCATACACTTCCGCTCTaGTTTTCGCTTCTTATATAT +
Preference number: 4 (lower is better)
Translates to: EVLLSEQHLASLISYRWEHTLPL*FSLLIY
Trigger: ATATATAAGAAGCGAAAATCAGAGCGGAAGTGTATG...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAACTGAGCCTTCTTTCATaGTTACCCTGGGAAAAATGG +
Preference number: 4 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKLSLLS*LPWEKW
Trigger: CCATTTTTCCCAGGGTAATCATGAAAGAAGGCTCAG...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGTGCCTGACAAACTTCTaGCAGCAGCTTTGCTATTCT +
Preference number: 4 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGCLTNF*QQLCYS
Trigger: AGAATAGCAAAGCTGCTGTCAGAAGTTTGTCAGGCA...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGATAAACATCTCTGCCTaGCAAACTTCTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVINISA*QTSDSS
Trigger: GCTGCTGTCAGAAGTTTGTCAGGCAGAGATGTTTAT...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACCTGTGCTGGTTTGAGTaGGCCTCTTTTGATTTTCCA +
Preference number: 4 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINLCWFE*ASFDFP
Trigger: TGGAAAATCAAAAGAGGCTCACTCAAACCAGCACAG...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGCCCTTACGCCATCAGTaGAATTATTGGAAACCACCT +
Preference number: 4 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGPLRHQ*NYWKPP
Trigger: AGGTGGTTTCCAATAATTGCACTGATGGCGTAAGGG...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATCACCCTCTTCTAATTaGACCATGAGAGTGACGTTG +
Preference number: 4 (lower is better)
Translates to: NNEVLLSEQHLASLISYRSPSSN*TMRVTL
Trigger: CAACGTCACTCTCATGGTGCAATTAGAAGAGGGTGA...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCAGAATTCCTCATATACTaGGATGGTCTTTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: VEGGVACLALCNRRDESPEFLIY*DGLCVL
Trigger: CAAGACACAAAGACCATCGCAGTATATGAGGAATTC...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR GCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGGGTTTCAAACTCCTGTaGACGTCTTTGTGTCTTATG +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGGFKLL*TSLCLM
Trigger: CATAAGACACAAAGACGTGCACAGGAGTTTGAAACC...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATGGCACTTCTGCGGTTTaGCAGTGTACTGTTCCCTTA +
Preference number: 4 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYGTSAV*QCTVPL
Trigger: TAAGGGAACAGTACACTGCCAAACCGCAGAAGTGCC...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTATGGCAGATCCACTGTaGGTTGGAGTGAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSMADPL*VGVRST
Trigger: GGTGGACCTCACTCCAACCCACAGTGGATCTGCCAT...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTGCGTTGAAGGCGGAGTaGCGTGTCTTGCTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLALKAE*RVLLFA
Trigger: TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGC...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp ACTTGGGGTTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACAGCGTTGAAGGCGGAGTaGCGTGTCTTGCTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: TWGLEGRDSKISTDHGHTALKAE*RVLLFA
Trigger: TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGC...TGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAACCCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGAGAAGCTGGCATGCTTaGGAATGTACAAAACTGACA +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGRSWHA*ECTKLT
Trigger: TGTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCT...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATGGAAGCCTGGCAGGTTaGGGATCAATTGAGTTCTAC +
Preference number: 4 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYGSLAG*GSIEFY
Trigger: GTAGAACTCAATTGATCCCCAACCTGCCAGGCTTCC...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGTGTTTGAGATTCAGCTaGAATGGCCTAGTACAATGG +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGCLRFS*NGLVQW
Trigger: CCATTGTACTAGGCCATTCCAGCTGAATCTCAAACA...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp ACTTGGGGTTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACAACCGCTGCGAACACCTaGTTCTCATCGGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: TWGLEGRDSKISTDHGHTTAANT*FSSVLI
Trigger: TATCAGCACCGATGAGAATCAGGTGTTCGCAGCGGT...TGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAACCCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp ATGTTTCCAGGTGGGAAAAGGCAGGGATATTTGAAAAAGGCAGGTTCTAGAGGAGCTGGCAATGATCCCTaGTGTGTAGGGATTCTCAGA +
Preference number: 4 (lower is better)
Translates to: MFPGGKRQGYLKKAGSRGAGNDP*CVGILR
Trigger: TCTGAGAATCCCTACACATCAGGGATCATTGCCAGC...TCCTCTAGAACCTGCCTTTTTCAAATATCCCTGCCTTTTCCCACCTGGAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TGCAGATTTCCTTGGCCTATATATGTTATGAATTTTCTACAAACACGACCGATCACCACCACACGTAAGTaGGGGTGCCCACTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CRFPWPIYVMNFLQTRPITTTRK*GCPLGW
Trigger: CCAGCCAAGTGGGCACCCTCACTTACGTGTGGTGGT...GATCGGTCGTGTTTGTAGAAAATTCATAACATATATAGGCCAAGGAAATCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTCATGGTGGAAAGAGGTaGACAGGAAACCAAGGTCCG +
Preference number: 4 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSHGGKR*TGNQGP
Trigger: CGGACCTTGGTTTCCTGTTCACCTCTTTCCACCATG...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCGGATCCTGGAGATGCTaGATCTCTAGCTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTGSWRC*ISSWPS
Trigger: AGATGGCCAGCTAGAGATTCAGCATCTCCAGGATCC...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGCCTTCTTGGATAAGCTaGCATCTTCTCCCAAATTCA +
Preference number: 4 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVPSWIS*HLLPNS
Trigger: TGAATTTGGGAGAAGATGGCAGCTTATCCAAGAAGG...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGACCATTCTTGGACCGCTaGGAACACCTGATTCTCATC +
Preference number: 4 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGPFLDR*EHLILI
Trigger: GATGAGAATCAGGTGTTCGCAGCGGTCCAAGAATGG...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTTCTACTTTGACCAGCTaGCATTCAGAGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLSTLTS*HSERWL
Trigger: CAGCCACCGCTCTGAATGGCAGCTGGTCAAAGTAGA...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp ACTTGGGGTTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACACGGAGTGGCGTGTCTTaGTCTTTGCAATCGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TWGLEGRDSKISTDHGHTRSGVS*SLQSER
Trigger: TCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCG...TGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAACCCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTAGAGCACCTGTACACTaGCCCTCCAGACATGTTCTC +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLRAPVH*PSRHVL
Trigger: GAGAACATGTCTGGAGGGGCAGTGTACAGGTGCTCT...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTGTTTCTGACATGCTTTaGCTCCCTGCCTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLVSDML*LPASLP
Trigger: AGGAAGGGAGGCAGGGAGGCAAAGCATGTCAGAAAC...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAAAGCAAAGCAAACCTCTaGATTTTGGACAGTGAATCC +
Preference number: 4 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKSKANL*ILDSES
Trigger: GGATTCACTGTCCAAAATGCAGAGGTTTGCTTTGCT...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCATCCAGTCTTCTTGTTTaGGGTGAAAAAGCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSSSLLV*GEKASF
Trigger: AAAGCTTGCTTTTTCACCCCAAACAAGAAGACTGGA...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAACAATCAAAGAGTCTaGGTCAATGTAGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSNNQRV*VNVAWK
Trigger: TTTCCAGGCTACATTGACCCAGACTCTTTGATTGTT...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTCCTCATATACTGCGATaGTCTTTGTGTCTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVPHILR*SLCLVG
Trigger: TCCTACAAGACACAAAGACCATCGCAGTATATGAGG...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAACAGGATGTGCTGGCCTaGAACCCCTGTGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQQDVLA*NPCGFH
Trigger: GTGGAAGCCACAGGGGTTCCAGGCCAGCACATCCTG...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp ACTTGGGGTTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACACAAAGAGTTCAGCAGTaGTGGGTAAGCCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: TWGLEGRDSKISTDHGHTQRVQQ*WVSQGA
Trigger: TGCTCCCTGGCTTACCCACCACTGCTGAACTCTTTG...TGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAACCCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTCAAAGAGTTCAGCAGTaGTGGGTAAGCCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSQRVQQ*WVSQGA
Trigger: TGCTCCCTGGCTTACCCACCACTGCTGAACTCTTTG...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACAAGGACTCGGACTCCTaGCTTCAGCTCGAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNKDSDS*LQLEVY
Trigger: GTACACTTCGAGCTGAAGCCAGGAGTCCGAGTCCTT...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTAGAGCAGCATCAGCATaGCAGATCCACTGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSRAASA*QIHCGL
Trigger: CAACCCACAGTGGATCTGCCATGCTGATGCTGCTCT...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATTATGGAAATACTTCCTaGCAAAATAGGAAACAGAAC +
Preference number: 4 (lower is better)
Translates to: RFGVEGGVACLALCNRRDYGNTS*QNRKQN
Trigger: GTTCTGTTTCCTATTTTGCCAGGAAGTATTTCCATA...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGCAGAAAGCAGCCTTGTaGCCACTGCTGACCAACAGA +
Preference number: 4 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKQKAAL*PLLTNR
Trigger: TCTGTTGGTCAGCAGTGGCCACAAGGCTGCTTTCTG...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGAACTTACTTGGGGTTTaGAGGGAAGAGATTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGNLLGV*REEIQR
Trigger: TCTTTGAATCTCTTCCCTCCAAACCCCAAGTAAGTT...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACTGTGTTATACCCTGTTaGCTTAGGGACATAGCAAAG +
Preference number: 4 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINCVIPC*LRDIAK
Trigger: CTTTGCTATGTCCCTAAGCCAACAGGGTATAACACA...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGAGGAAGCCTGGCAGGTTaGGGATCAATTGAGTTCTAC +
Preference number: 4 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGGSLAG*GSIEFY
Trigger: GTAGAACTCAATTGATCCCCAACCTGCCAGGCTTCC...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp ATACCCTGTTGGCTTAGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTCTCATCTATAAGCTaGCCAGGCCTCCTTAGTTCA +
Preference number: 4 (lower is better)
Translates to: IPCWLRDIAKKEAEHTKRFSSIS*PGLLSS
Trigger: TGAACTAAGGAGGCCTGGCCAGCTTATAGATGAGAA...CCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCTAAGCCAACAGGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR TCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACAAAGCGAGCTCTCTGTaGTGCTCCCCAGGTTATAGT +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNKASSL*CSPGYS
Trigger: ACTATAACCTGGGGAGCATCACAGAGAGCTCGCTTT...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGGCTGGCAATGATCCCTaGTGTGTAGGGATTCTCAGA +
Preference number: 4 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKAGNDP*CVGILR
Trigger: TCTGAGAATCCCTACACATCAGGGATCATTGCCAGC...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACAAGAGACAAACATGCTaGTGTCAGTGTCTGACAATT +
Preference number: 4 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINKRQTC*CQCLTI
Trigger: AATTGTCAGACACTGACATCAGCATGTTTGTCTCTT...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGCAGCTCGAAGTGTACTaGGTTTTGGTTGAGCGTGTG +
Preference number: 4 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKQLEVY*VLVERV
Trigger: CACACGCTCAACCAAAACTCAGTACACTTCGAGCTG...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTATGGTCACACATGGATaGCAAACAAATGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVMVTHG*QTNVKT
Trigger: TGTCTTCACATTTGTTTGTCATCCATGTGTGACCAT...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATTGCCTGACAAACTTCTaGCAGCAGCTTTGCTATTCT +
Preference number: 4 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYCLTNF*QQLCYS
Trigger: AGAATAGCAAAGCTGCTGTCAGAAGTTTGTCAGGCA...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGATTTTTAGCTTGCCCTaGATCTTACCTTCCACATAC +
Preference number: 4 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGIFSLP*ILPSTY
Trigger: GTATGTGGAAGGTAAGATTCAGGGCAAGCTAAAAAT...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCCATTCTTGGACCGCTaGGAACACCTGATTCTCATC +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNPFLDR*EHLILI
Trigger: GATGAGAATCAGGTGTTCGCAGCGGTCCAAGAATGG...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGAGATTCCATAGCTCCTaGATATTTTCCTTGCATACA +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGRFHSS*IFSLHT
Trigger: TGTATGCAAGGAAAATATGCAGGAGCTATGGAATCT...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCGGTCACACGGAAAATaGCCACGTTCTGATAGACGT +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNRSHGK*PRSDRR
Trigger: ACGTCTATCAGAACGTGGGCATTTTCCGTGTGACCG...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACAAGGGAAGAGACAGGTaGACGTGCTCCAAGGGACAA +
Preference number: 4 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDKGRDR*TCSKGQ
Trigger: TTGTCCCTTGGAGCACGTGCACCTGTCTCTTCCCTT...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGGAATTCCTCATATACTaGGATGGTCTTTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVEFLIY*DGLCVL
Trigger: CAAGACACAAAGACCATCGCAGTATATGAGGAATTC...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCTGCCAAGCACCCCACTaGTCTCAAAGTTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTCQAPH*SQSCCL
Trigger: CAAACAGCAACTTTGAGAGCAGTGGGGTGCTTGGCA...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACTGCCATTCAGAGCGGTaGCTGAAGTGTCCAAACACT +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNCHSER*LKCPNT
Trigger: AGTGTTTGGACACTTCAGCCACCGCTCTGAATGGCA...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGCAGATTTCCTTGGCCTATATATGTTATGAATTTTCTACAAACACGACCGATCAGAGTTCAGCAGTGGTaGGTAAGCCAGGGAGCACCG +
Preference number: 4 (lower is better)
Translates to: CRFPWPIYVMNFLQTRPIRVQQW*VSQGAP
Trigger: CGGTGCTCCCTGGCTTACCCACCACTGCTGAACTCT...GATCGGTCGTGTTTGTAGAAAATTCATAACATATATAGGCCAAGGAAATCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACAGAGCAGCATCAGCATaGCAGATCCACTGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDRAASA*QIHCGL
Trigger: CAACCCACAGTGGATCTGCCATGCTGATGCTGCTCT...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTATGGAAATACTTCCTaGCAAAATAGGAAACAGAAC +
Preference number: 4 (lower is better)
Translates to: FGVEGGVACLALCNRRDEYGNTS*QNRKQN
Trigger: GTTCTGTTTCCTATTTTGCCAGGAAGTATTTCCATA...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CCA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGGATTCTCAGCAACTATaGAAATACTTCCTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGDSQQL*KYFLAK
Trigger: TTTTGCCAGGAAGTATTTCCATAGTTGCTGAGAATC...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACTACATGAAGTCATaGACATCAGGATCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILNYMKS*TSGSLG
Trigger: TCCTAAAGATCCTGATGTCCATGACTTCATGTAGTT...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATAAAGTGTTGCTTGGGTaGTTCAGGGTAGAACATGCA +
Preference number: 4 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYKVLLG*FRVEHA
Trigger: TGCATGTTCTACCCTGAACCACCCAAGCAACACTTT...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAACATAGAGGTCGATCATaGTGTTGCCCTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQHRGRS*CCPQGL
Trigger: GAGGCCCTGAGGGCAACATCATGATCGACCTCTATG...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTTGTCTTTGCTGGCAATaGTCCCTGATGTGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLCLCWQ*SLMCRD
Trigger: ATCCCTACACATCAGGGATCATTGCCAGCAAAGACA...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACGGTGTTCCCTGCATCTaGAGAGACAAACATGCTGAT +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNGVPCI*RDKHAD
Trigger: ATCAGCATGTTTGTCTCTTCAGATGCAGGGAACACC...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGCACAGAGAGGATGGATTaGACCAAAATGCCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FAYINSFAYSICFQVGKGTERMD*TKMPAG
Trigger: GCCTGCCGGCATTTTGGTTCAATCCATCCTCTCTGT...GCCTTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp ACTTGGGGTTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACAGTGGATCAGCAATTCTaGTATCTGCTCCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: TWGLEGRDSKISTDHGHTVDQQF*YLLQVI
Trigger: GATGACCTGGAGCAGATATCAGAATTGCTGATCCAC...TGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAACCCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGAGTACTGAGTTTTGGTTaGGCGTGTGGATCAGCAATT +
Preference number: 4 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGVLSFG*ACGSAI
Trigger: AATTGCTGATCCACACGCTCAACCAAAACTCAGTAC...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAACCTTGTGGCCACTGCTaGCCAACAGAGCTACCAAAG +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQPCGHC*PTELPK
Trigger: CTTTGGTAGCTCTGTTGGTCAGCAGTGGCCACAAGG...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGGTACATGGCCAGGTTTaGATTACTTTGCATATATCA +
Preference number: 4 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGVHGQV*ITLHIS
Trigger: TGATATATGCAAAGTAATTCAAACCTGGCCATGTAC...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACGTCAGAGAGCACACATaGAATCACTGGGATCATCCT +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNVREHT*NHWDHP
Trigger: AGGATGATCCCAGTGATTTCATGTGTGCTCTCTGAC...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACACTTTAATGATACTATaGTACTCAGAGGTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINTLMIL*YSEVRE
Trigger: CTCTCTGACCTCTGAGTATCATAGTATCATTAAAGT...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGTTGGGAGACTCCAACTaGAGAGGATCAATGAGGATG +
Preference number: 4 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKLGDSN*RGSMRM
Trigger: CATCCTCATTGATCCTCTTCAGTTGGAGTCTCCCAA...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAATGCTCCCATGATACATaGTTCCCCCTGGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQCSHDT*FPLAVQ
Trigger: CTGCACAGCCAGGGGGAAGCATGTATCATGGGAGCA...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATCCTGCATATTTTCCTTaGATACACTTCCGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYPAYFP*IHFRSD
Trigger: ATCAGAGCGGAAGTGTATGCAAGGAAAATATGCAGG...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACGCGTGTCTTGCTCTTTaGAATCGGAGAGATGAGTCA +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNACLAL*NRRDES
Trigger: TGACTCATCTCTCCGATTGCAAAGAGCAAGACACGC...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp ATGTTTCCAGGTGGGAAAAGGCAGGGATATTTGAAAAAGGCAGGTTCTAGAGGAGCACAGAAGCTGGCATaGTTGGGAATGTACAAAACT +
Preference number: 4 (lower is better)
Translates to: MFPGGKRQGYLKKAGSRGAQKLA*LGMYKT
Trigger: AGTTTTGTACATTCCCAAGCATGCCAGCTTCTGTGC...TCCTCTAGAACCTGCCTTTTTCAAATATCCCTGCCTTTTCCCACCTGGAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCGTCACAGGAGGAAATTaGCCTGCGAAATTGTCACAC +
Preference number: 4 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTVTGGN*PAKLSH
Trigger: GTGTGACAATTTCGCAGGGCAATTTCCTCCTGTGAC...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACGTTTATAGTGGGCTTTaGCCAGTCCATAATACTAAA +
Preference number: 4 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINVYSGL*PVHNTK
Trigger: TTTAGTATTATGGACTGGGCAAAGCCCACTATAAAC...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATTGCTATTCTTTCTGTaGCTGAACTACATGAAGTCA +
Preference number: 4 (lower is better)
Translates to: NNEVLLSEQHLASLISYRLLFFL*LNYMKS
Trigger: TGACTTCATGTAGTTCAGGCACAGAAAGAATAGCAA...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTGTTCAGGGTAGAACATaGACAGTTTGCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLVQGRT*TVCLLG
Trigger: TCCCAGAAGGCAAACTGTGCATGTTCTACCCTGAAC...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACTGCCAAGCACCCCACTaGTCTCAAAGTTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDCQAPH*SQSCCL
Trigger: CAAACAGCAACTTTGAGAGCAGTGGGGTGCTTGGCA...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTAATGAGAGATTTCAATaGTCAGTTGGATTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVNERFQ*SVGFLE
Trigger: TTCCAGGAATCCAACTGAGCATTGAAATCTCTCATT...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGAATGAGAGATTTCAATaGTCAGTTGGATTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGNERFQ*SVGFLE
Trigger: TTCCAGGAATCCAACTGAGCATTGAAATCTCTCATT...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCCCAGTAGAACCTGTTTaGTACAACCCCTTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSPVEPV*YNPFLD
Trigger: ATCCAAGAAGGGGTTGTACCAAACAGGTTCTACTGG...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACTTGTGTCTTGTAGGATaGCATTCCCAGCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNLCLVG*HSQLRP
Trigger: AGGTCTCAGCTGGGAATGCCATCCTACAAGACACAA...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGAGATTCTCAGCAACTATaGAAATACTTCCTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: NNEVLLSEQHLASLISYRDSQQL*KYFLAK
Trigger: TTTTGCCAGGAAGTATTTCCATAGTTGCTGAGAATC...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAAGTTGATCATGGTCACACATaGATGACAAACAAATGTGAA +
Preference number: 4 (lower is better)
Translates to: WIPGKHRTAAKHPTALKVDHGHT*MTNKCE
Trigger: TTCACATTTGTTTGTCATCCATGTGTGACCATGATC...AACTTTGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAAGATCATGGTCACACATaGATGACAAACAAATGTGAA +
Preference number: 4 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKDHGHT*MTNKCE
Trigger: TTCACATTTGTTTGTCATCCATGTGTGACCATGATC...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGAGAAGGACAACTTACTTaGGGTTTGGAGGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGEGQLT*GLEGRD
Trigger: ATCTCTTCCCTCCAAACCCCAAGTAAGTTGTCCTTC...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp ACTTGGGGTTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACACTAGCTGGCCATCTTTaGTCACTTCCCAAAATGCCA +
Preference number: 4 (lower is better)
Translates to: TWGLEGRDSKISTDHGHTLAGHL*SLPKMP
Trigger: TGGCATTTTGGGAAGTGACCAAAGATGGCCAGCTAG...TGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAACCCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCGAGATTCAGCTGGAATaGCCTAGTACAATGGTTCTC +
Preference number: 4 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSEIQLE*PSTMVL
Trigger: GAGAACCATTGTACTAGGCCATTCCAGCTGAATCTC...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCTGCCTTCTGGGATTTTaGAAAACGTTGCAGTATCGG +
Preference number: 4 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSCLLGF*KTLQYR
Trigger: CCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCA...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCACTTGTAATCTACTTTaGCCAGCTGCCATTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTTCNLL*PAAIQS
Trigger: GCTCTGAATGGCAGCTGGTCAAAGTAGATTACAAGT...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTACTTGTAATCTACTTTaGCCAGCTGCCATTCAGAGC +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLTCNLL*PAAIQS
Trigger: GCTCTGAATGGCAGCTGGTCAAAGTAGATTACAAGT...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACTCTGATAGACGTGTTTaGTCCCATCTTCCATGGAGC +
Preference number: 4 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDSDRRV*SHLPWS
Trigger: GCTCCATGGAAGATGGGATCAAACACGTCTATCAGA...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAACATGGTGGAAAGAGGTaGACAGGAAACCAAGGTCCG +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQHGGKR*TGNQGP
Trigger: CGGACCTTGGTTTCCTGTTCACCTCTTTCCACCATG...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp ACTTGGGGTTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACACTGAGCCTTCTTTCATaGTTACCCTGGGAAAAATGG +
Preference number: 4 (lower is better)
Translates to: TWGLEGRDSKISTDHGHTLSLLS*LPWEKW
Trigger: CCATTTTTCCCAGGGTAATCATGAAAGAAGGCTCAG...TGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAACCCCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCCATTCCCTTTATCCCTaGTACCTCATAGAGGTCGAT +
Preference number: 4 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTHSLYP*YLIEVD
Trigger: ATCGACCTCTATGAGGTAGCAGGGATAAAGGGAATG...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTCCCTTACGCCATCAGTaGAATTATTGGAAACCACCT +
Preference number: 4 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSPLRHQ*NYWKPP
Trigger: AGGTGGTTTCCAATAATTGCACTGATGGCGTAAGGG...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAAAAGGGAAGAGACAGGTaGACGTGCTCCAAGGGACAA +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQKGRDR*TCSKGQ
Trigger: TTGTCCCTTGGAGCACGTGCACCTGTCTCTTCCCTT...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACGCGTGTCTTGCTCTTTaGAATCGGAGAGATGAGTCA +
Preference number: 4 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDACLAL*NRRDES
Trigger: TGACTCATCTCTCCGATTGCAAAGAGCAAGACACGC...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAACGGAGTGGCGTGTCTTaGTCTTTGCAATCGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQRSGVS*SLQSER
Trigger: TCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCG...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGATTAAAAAGTCCCGATaGAGTGAGTGTTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVIKKSR*SECLFV
Trigger: AACAAACAAACACTCACTGCATCGGGACTTTTTAAT...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TGCAGATTTCCTTGGCCTATATATGTTATGAATTTTCTACAAACACGACCGATCGTTTCTGACATGCTTTaGCTCCCTGCCTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CRFPWPIYVMNFLQTRPIVSDML*LPASLP
Trigger: AGGAAGGGAGGCAGGGAGGCAAAGCATGTCAGAAAC...GATCGGTCGTGTTTGTAGAAAATTCATAACATATATAGGCCAAGGAAATCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGGCACAGAAGCTGGCATaGTTGGGAATGTACAAAACT +
Preference number: 4 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKAQKLA*LGMYKT
Trigger: AGTTTTGTACATTCCCAAGCATGCCAGCTTCTGTGC...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACTTGTGTCTTGTAGGATaGCATTCCCAGCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDLCLVG*HSQLRP
Trigger: AGGTCTCAGCTGGGAATGCCATCCTACAAGACACAA...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTGTAGTCATCCAGGTTTaGAGAAAAGGACAAGCGAAG +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLVVIQV*RKGQAK
Trigger: CTTCGCTTGTCCTTTTCTCCAAACCTGGATGACTAC...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCGTAGTCATCCAGGTTTaGAGAAAAGGACAAGCGAAG +
Preference number: 4 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTVVIQV*RKGQAK
Trigger: CTTCGCTTGTCCTTTTCTCCAAACCTGGATGACTAC...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGAAGTGTACTGAGTTTTaGTTGAGCGTGTGGATCAGC +
Preference number: 4 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKKCTEF*LSVWIS
Trigger: GCTGATCCACACGCTCAACCAAAACTCAGTACACTT...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACGAAGGACAACTTACTTaGGGTTTGGAGGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNEGQLT*GLEGRD
Trigger: ATCTCTTCCCTCCAAACCCCAAGTAAGTTGTCCTTC...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACCTTTTCCAAAGTACATaGCCAGGTTTGAATTACTTT +
Preference number: 4 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINLFQST*PGLNYF
Trigger: AAAGTAATTCAAACCTGGCCATGTACTTTGGAAAAG...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGCTTTTCCAAAGTACATaGCCAGGTTTGAATTACTTT +
Preference number: 4 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVLFQST*PGLNYF
Trigger: AAAGTAATTCAAACCTGGCCATGTACTTTGGAAAAG...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACGCACAGTTTGCCTTCTaGGATTTTGGAAAACGTTGC +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNAQFAF*DFGKRC
Trigger: GCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGC...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCGTAGAAAGTGTTGCTTaGGTGGTTCAGGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTVESVA*VVQGRT
Trigger: TGTTCTACCCTGAACCACCCAAGCAACACTTTCTAC...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTGTAGAAAGTGTTGCTTaGGTGGTTCAGGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLVESVA*VVQGRT
Trigger: TGTTCTACCCTGAACCACCCAAGCAACACTTTCTAC...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAAATTCAGAGCGGTGGCTaGAGTGTCCAAACACTGTCA +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQIQSGG*SVQTLS
Trigger: TGACAGTGTTTGGACACTTCAGCCACCGCTCTGAAT...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGCACTGCCGTCGCATTaGCCTCTTTGTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: YFAYINSFAYSICFQVGKALPSH*PLCSLW
Trigger: CCACAAAGAACAAAGAGGTCAATGCGACGGCAGTGC...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCAACTTAGAAGGGAAATaGCAGTATGGAAAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSNLEGK*QYGKWN
Trigger: GTTCCACTTTCCATACTGTCATTTCCCTTCTAAGTT...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTAAAGGCAGGGATATTTaGAAAAGGCAGGTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLKGRDI*KRQVLE
Trigger: CTCTAGAACCTGCCTTTTTCAAATATCCCTGCCTTT...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACAAAGGCAGGGATATTTaGAAAAGGCAGGTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNKGRDI*KRQVLE
Trigger: CTCTAGAACCTGCCTTTTTCAAATATCCCTGCCTTT...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGAATTTTTAGCTTGCCCTaGATCTTACCTTCCACATAC +
Preference number: 4 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGIFSLP*ILPSTY
Trigger: GTATGTGGAAGGTAAGATTCAGGGCAAGCTAAAAAT...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGCAAAGCTACTCTCCTATaGGCTGGGATTCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: FAYINSFAYSICFQVGKGKATLL*AGIPPS
Trigger: AGAAGGTGGAATCCCAGCTCATAGGAGAGTAGCTTT...GCCTTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR GCA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCCCTTCTTGGATAAGCTaGCATCTTCTCCCAAATTCA +
Preference number: 4 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTPSWIS*HLLPNS
Trigger: TGAATTTGGGAGAAGATGGCAGCTTATCCAAGAAGG...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCCTGCATATTTTCCTTaGATACACTTCCGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNPAYFP*IHFRSD
Trigger: ATCAGAGCGGAAGTGTATGCAAGGAAAATATGCAGG...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACAGCAATTCTGATATCTaGTCCAGGTCATCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNSNSDI*SRSSVD
Trigger: GTCAACTGATGACCTGGAGCAGATATCAGAATTGCT...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTAGCAATTCTGATATCTaGTCCAGGTCATCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSSNSDI*SRSSVD
Trigger: GTCAACTGATGACCTGGAGCAGATATCAGAATTGCT...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCCACTGCTCTCAAAGTTaGTGTTTGGAACTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSHCSQS*CLELLK
Trigger: TTTCAGAAGTTCCAAACAGCAACTTTGAGAGCAGTG...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAAAAAACACAGAACAGCTaGCAAGCACCCCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQKTQNS*QAPHCS
Trigger: AGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTT...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp ACTTGGGGTTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACACATCAGTGCAATTATTaGAAACCACCTTCCTGTACC +
Preference number: 4 (lower is better)
Translates to: TWGLEGRDSKISTDHGHTHQCNY*KPPSCT
Trigger: GGTACAGGAAGGTGGTTTCCAATAATTGCACTGATG...TGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAACCCCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp ATACCCTGTTGGCTTAGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTATGGAAATACTTCCTaGCAAAATAGGAAACAGAAC +
Preference number: 4 (lower is better)
Translates to: IPCWLRDIAKKEAEHTKRYGNTS*QNRKQN
Trigger: GTTCTGTTTCCTATTTTGCCAGGAAGTATTTCCATA...CCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCTAAGCCAACAGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGCAGATTTCCTTGGCCTATATATGTTATGAATTTTCTACAAACACGACCGATCATTTCCTACTGCAGTTaGGGCAGGAGTAGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: CRFPWPIYVMNFLQTRPIISYCS*GRSRES
Trigger: GCTTTCCCTACTCCTGCCCCAACTGCAGTAGGAAAT...GATCGGTCGTGTTTGTAGAAAATTCATAACATATATAGGCCAAGGAAATCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGGTGAAGACAGGACAATaGGTAACTAATGGGATTCCA +
Preference number: 4 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKVKTGQ*VTNGIP
Trigger: TGGAATCCCATTAGTTACCCATTGTCCTGTCTTCAC...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTCTCACAAGAATCTTCTaGAATCAGATCGCACGAGAT +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLLTRIF*NQIARD
Trigger: ATCTCGTGCGATCTGATTCCAGAAGATTCTTGTGAG...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACTGTGTTATACCCTGTTaGCTTAGGGACATAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNCVIPC*LRDIAK
Trigger: CTTTGCTATGTCCCTAAGCCAACAGGGTATAACACA...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCTGTTTGAGATTCAGCTaGAATGGCCTAGTACAATGG +
Preference number: 4 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTCLRFS*NGLVQW
Trigger: CCATTGTACTAGGCCATTCCAGCTGAATCTCAAACA...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTTATAACTTTTGGTCTTaGCTGTATGCCAGAATCCAG +
Preference number: 4 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSYNFWS*LYARIQ
Trigger: CTGGATTCTGGCATACAGTCAAGACCAAAAGTTATA...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TGCAGATTTCCTTGGCCTATATATGTTATGAATTTTCTACAAACACGACCGATCCTGAGACCTGCACTGTaGTGGTATTCATTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: CRFPWPIYVMNFLQTRPILRPAL*WYSFLL
Trigger: CAGAAGGAATGAATACCATCACAGTGCAGGTCTCAG...GATCGGTCGTGTTTGTAGAAAATTCATAACATATATAGGCCAAGGAAATCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TGCAGATTTCCTTGGCCTATATATGTTATGAATTTTCTACAAACACGACCGATCCTCCAGGTCATCAGTTaGCCTTTTGTTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CRFPWPIYVMNFLQTRPILQVIS*PFVFSS
Trigger: GCTGGAGAAAACAAAAGGTCAACTGATGACCTGGAG...GATCGGTCGTGTTTGTAGAAAATTCATAACATATATAGGCCAAGGAAATCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAACTCCAGGTCATCAGTTaGCCTTTTGTTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQLQVIS*PFVFSS
Trigger: GCTGGAGAAAACAAAAGGTCAACTGATGACCTGGAG...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCCTTGTTGTCTGTGTCTaGAGAATTAAAAAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTLVVCV*RIKKSR
Trigger: TCGGGACTTTTTAATTCTTCAGACACAGACAACAAG...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTATGGTCACACATGGATaGCAAACAAATGTGAAGACA +
Preference number: 4 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSMVTHG*QTNVKT
Trigger: TGTCTTCACATTTGTTTGTCATCCATGTGTGACCAT...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TGCAGATTTCCTTGGCCTATATATGTTATGAATTTTCTACAAACACGACCGATCGTCAGAGAGCACACATaGAATCACTGGGATCATCCT +
Preference number: 4 (lower is better)
Translates to: CRFPWPIYVMNFLQTRPIVREHT*NHWDHP
Trigger: AGGATGATCCCAGTGATTTCATGTGTGCTCTCTGAC...GATCGGTCGTGTTTGTAGAAAATTCATAACATATATAGGCCAAGGAAATCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAATTGAACTGCAACTCTaGGGACTCCCTGTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: YFAYINSFAYSICFQVGKIELQL*GLPVLV
Trigger: AACCAGCACAGGGAGTCCTCAGAGTTGCAGTTCAAT...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGCCATTCCCTTTATCCCTaGTACCTCATAGAGGTCGAT +
Preference number: 4 (lower is better)
Translates to: FAYINSFAYSICFQVGKGHSLYP*YLIEVD
Trigger: ATCGACCTCTATGAGGTAGCAGGGATAAAGGGAATG...GCCTTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAACGGTCACACGGAAAATaGCCACGTTCTGATAGACGT +
Preference number: 4 (lower is better)
Translates to: YFAYINSFAYSICFQVGKRSHGK*PRSDRR
Trigger: ACGTCTATCAGAACGTGGGCATTTTCCGTGTGACCG...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTGAATTCCTCATATACTaGGATGGTCTTTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSEFLIY*DGLCVL
Trigger: CAAGACACAAAGACCATCGCAGTATATGAGGAATTC...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATATTAAAAAGTCCCGATaGAGTGAGTGTTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYIKKSR*SECLFV
Trigger: AACAAACAAACACTCACTGCATCGGGACTTTTTAAT...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACGGTTTCAAACTCCTGTaGACGTCTTTGTGTCTTATG +
Preference number: 4 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDGFKLL*TSLCLM
Trigger: CATAAGACACAAAGACGTGCACAGGAGTTTGAAACC...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCAGAACATGCACAGTTTaGCTTCTGGGATTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTRTCTV*LLGFWK
Trigger: TTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCT...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGCAGATTTCCTTGGCCTATATATGTTATGAATTTTCTACAAACACGACCGATCAAGGCTGATTCCTGTTaGCCTCTGTACAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CRFPWPIYVMNFLQTRPIKADSC*PLYSSA
Trigger: TGCAGAACTGTACAGAGGCCAACAGGAATCAGCCTT...GATCGGTCGTGTTTGTAGAAAATTCATAACATATATAGGCCAAGGAAATCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGCTTCGGAAGCTTCATTTaGGCAAATGCATTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: FAYINSFAYSICFQVGKGFGSFI*ANAFLR
Trigger: CCGAAGGAATGCATTTGCCCAAATGAAGCTTCCGAA...GCCTTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTTTTTGGTTGAGCGTGTaGATCAGCAATTCTGATATC +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLFWLSV*ISNSDI
Trigger: GATATCAGAATTGCTGATCCACACGCTCAACCAAAA...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAAGTCGCCTGTAGCCTTTaGGGGTTTTCCTTAAATTGC +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQVACSL*GFSLNC
Trigger: GCAATTTAAGGAAAACCCCCAAAGGCTACAGGCGAC...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAAAGGGGAGGCAATCATaGTGGAAAGAGGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: YFAYINSFAYSICFQVGKKGRQS*WKEVNR
Trigger: CCTGTTCACCTCTTTCCACCATGATTGCCTCCCCTT...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAACATGGGCACAGAAGCTaGCATGCTTGGGAATGTACA +
Preference number: 4 (lower is better)
Translates to: YFAYINSFAYSICFQVGKHGHRS*HAWECT
Trigger: TGTACATTCCCAAGCATGCCAGCTTCTGTGCCCATG...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGTTACCCTGGGAAAAATaGGGTTTCTTCATGCTTTGT +
Preference number: 4 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKLPWEK*GFFMLC
Trigger: ACAAAGCATGAAGAAACCCCATTTTTCCCAGGGTAA...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCAACTACATGAAGTCATaGACATCAGGATCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSNYMKS*TSGSLG
Trigger: TCCTAAAGATCCTGATGTCCATGACTTCATGTAGTT...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGCAGATTTCCTTGGCCTATATATGTTATGAATTTTCTACAAACACGACCGATCCTAGCTGGCCATCTTTaGTCACTTCCCAAAATGCCA +
Preference number: 4 (lower is better)
Translates to: CRFPWPIYVMNFLQTRPILAGHL*SLPKMP
Trigger: TGGCATTTTGGGAAGTGACCAAAGATGGCCAGCTAG...GATCGGTCGTGTTTGTAGAAAATTCATAACATATATAGGCCAAGGAAATCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGCAGTAGGTATGGGGTATaGATCCAGAATCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: FAYINSFAYSICFQVGKGSRYGV*IQNLDL
Trigger: GAGATCCAGATTCTGGATCCATACCCCATACCTACT...GCCTTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAATGGATGAGTGTCCGCTaGACATCACCCTCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: YFAYINSFAYSICFQVGKWMSVR*TSPSSN
Trigger: ATTAGAAGAGGGTGATGTTCAGCGGACACTCATCCA...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACAACTTAGAAGGGAAATaGCAGTATGGAAAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDNLEGK*QYGKWN
Trigger: GTTCCACTTTCCATACTGTCATTTCCCTTCTAAGTT...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACACTTTAATGATACTATaGTACTCAGAGGTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNTLMIL*YSEVRE
Trigger: CTCTCTGACCTCTGAGTATCATAGTATCATTAAAGT...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAACTTCATTTGGGCAAATaGATTCCTTCGGTAGGACAC +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQLHLGK*IPSVGH
Trigger: GTGTCCTACCGAAGGAATGCATTTGCCCAAATGAAG...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCAGATTCCATAGCTCCTaGATATTTTCCTTGCATACA +
Preference number: 4 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTRFHSS*IFSLHT
Trigger: TGTATGCAAGGAAAATATGCAGGAGCTATGGAATCT...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp ACTTGGGGTTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACAAGAGTATTGTCCACATaGACAGGCTTAAAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: TWGLEGRDSKISTDHGHTRVLST*TGLKLK
Trigger: TTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCT...TGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAACCCCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGTACAACCCCTTCTTaGATAAGCTGCCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: YFAYINSFAYSICFQVGKGTTPS*ISCHLL
Trigger: GAGAAGATGGCAGCTTATCCAAGAAGGGGTTGTACC...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAAAAGTGTACTGAGTTTTaGTTGAGCGTGTGGATCAGC +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQKCTEF*LSVWIS
Trigger: GCTGATCCACACGCTCAACCAAAACTCAGTACACTT...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGGATTCTCAGCAACTATaGAAATACTTCCTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKDSQQL*KYFLAK
Trigger: TTTTGCCAGGAAGTATTTCCATAGTTGCTGAGAATC...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGCCTCACAAGAATCTTCTaGAATCAGATCGCACGAGAT +
Preference number: 4 (lower is better)
Translates to: FAYINSFAYSICFQVGKGLTRIF*NQIARD
Trigger: ATCTCGTGCGATCTGATTCCAGAAGATTCTTGTGAG...GCCTTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTAAAACCTCAAGCCTGTaGTGTTTACTCTTTCTTATG +
Preference number: 4 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLKTSSL*CLLFLM
Trigger: CATAAGAAAGAGTAAACACCACAGGCTTGAGGTTTT...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAACAATCTCCGGGTCTGTaGGTAACATTATCTTACGCT +
Preference number: 4 (lower is better)
Translates to: YFAYINSFAYSICFQVGKQSPGL*VTLSYA
Trigger: AGCGTAAGATAATGTTACTCACAGACCCGGAGATTG...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAAAGGAGGAAATTGCCCTaGGAAATTGTCACACATTCA +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQRRKLP*EIVTHS
Trigger: TGAATGTGTGACAATTTCGCAGGGCAATTTCCTCCT...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGCCACTGCTCTCAAAGTTaGTGTTTGGAACTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: FAYINSFAYSICFQVGKGHCSQS*CLELLK
Trigger: TTTCAGAAGTTCCAAACAGCAACTTTGAGAGCAGTG...GCCTTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGCTTTTGGTTGAGCGTGTaGATCAGCAATTCTGATATC +
Preference number: 4 (lower is better)
Translates to: FAYINSFAYSICFQVGKGFWLSV*ISNSDI
Trigger: GATATCAGAATTGCTGATCCACACGCTCAACCAAAA...GCCTTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAATGCCTTCTGGGATTTTaGAAAACGTTGCAGTATCGG +
Preference number: 4 (lower is better)
Translates to: YFAYINSFAYSICFQVGKCLLGF*KTLQYR
Trigger: CCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCA...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR TCA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAACTTGTTGTCTGTGTCTaGAGAATTAAAAAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQLVVCV*RIKKSR
Trigger: TCGGGACTTTTTAATTCTTCAGACACAGACAACAAG...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR GCA 90 bp TTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGCAGATTCCATAGCTCCTaGATATTTTCCTTGCATACA +
Preference number: 4 (lower is better)
Translates to: FAYINSFAYSICFQVGKGRFHSS*IFSLHT
Trigger: TGTATGCAAGGAAAATATGCAGGAGCTATGGAATCT...GCCTTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGCAGATTTCCTTGGCCTATATATGTTATGAATTTTCTACAAACACGACCGATCAACTTACTTGGGGTTTaGAGGGAAGAGATTCAAAGA +
Preference number: 4 (lower is better)
Translates to: CRFPWPIYVMNFLQTRPINLLGV*REEIQR
Trigger: TCTTTGAATCTCTTCCCTCCAAACCCCAAGTAAGTT...GATCGGTCGTGTTTGTAGAAAATTCATAACATATATAGGCCAAGGAAATCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGCAGATTTCCTTGGCCTATATATGTTATGAATTTTCTACAAACACGACCGATCTTACCCTGGGAAAAATaGGGTTTCTTCATGCTTTGT +
Preference number: 4 (lower is better)
Translates to: CRFPWPIYVMNFLQTRPILPWEK*GFFMLC
Trigger: ACAAAGCATGAAGAAACCCCATTTTTCCCAGGGTAA...GATCGGTCGTGTTTGTAGAAAATTCATAACATATATAGGCCAAGGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACAATGGCCTAGTACAATaGTTCTCAAACTTTAGTATG +
Preference number: 4 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDNGLVQ*FSNFSM
Trigger: CATACTAAAGTTTGAGAACCATTGTACTAGGCCATT...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CCA 90 bp TGCAGATTTCCTTGGCCTATATATGTTATGAATTTTCTACAAACACGACCGATCAAAACCTCAAGCCTGTaGTGTTTACTCTTTCTTATG +
Preference number: 4 (lower is better)
Translates to: CRFPWPIYVMNFLQTRPIKTSSL*CLLFLM
Trigger: CATAAGAAAGAGTAAACACCACAGGCTTGAGGTTTT...GATCGGTCGTGTTTGTAGAAAATTCATAACATATATAGGCCAAGGAAATCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
3UTR CAA 72 bp TCTCTATGCTTTCTTTTCCAAAGTACATGGCCAGGTTaGAATTACTTTGCATATATCAACTCTTTCGCATAC +
Preference number: 4 (lower is better)
Translates to: SLCFLFQSTWPG*NYFAYINSFAY
Trigger: GTATGCGAAAGAGTTGATATATGCAAAGTAATTCAAACCTGGCCATGTACTTTGGAAAAGAAAGCATAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263054.10
ENST00000612154.4
ENST00000622431.4
CDS CCA 90 bp CCGCTCCGCTCCGTCTCCTCCGGCCGGAGCGTGCAGCAACCGCCATaGATGCCCCAGTGCCCCGAGCCCGCTCCAGGGATAGCGCTCGGT +
Preference number: 5 (lower is better)
Translates to: PLRSVSSGRSVQQPP*MPQCPEPAPGIALG
Trigger: ACCGAGCGCTATCCCTGGAGCGGGCTCGGGGCACTGGGGCATCCATGGCGGTTGCTGCACGCTCCGGCCGGAGGAGACGGAGCGGAGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263054.11
CDS GCA 90 bp TGCCTTCTCCTGATCCGCTCCGCTCCGTCTCCTCCGGCCGGAGCGTaGAGCAACCGCCATGGATGCCCCAGTGCCCCGAGCCCGCTCCAG +
Preference number: 5 (lower is better)
Translates to: CLLLIRSAPSPPAGA*SNRHGCPSAPSPLQ
Trigger: CTGGAGCGGGCTCGGGGCACTGGGGCATCCATGGCGGTTGCTGCACGCTCCGGCCGGAGGAGACGGAGCGGAGCGGATCAGGAGAAGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263054.11
CDS GCA 90 bp AAGCGGGTGGCTTTGTCCGGGTCCCGCTCCCGAGTCCCAGGCTCCTaGTGCCCTCCATCTCTTAGCACTCCCCGGGGGCTCCGACTCGCG +
Preference number: 5 (lower is better)
Translates to: KRVALSGSRSRVPGS*CPPSLSTPRGLRLA
Trigger: CGCGAGTCGGAGCCCCCGGGGAGTGCTAAGAGATGGAGGGCAGCAGGAGCCTGGGACTCGGGAGCGGGACCCGGACAAAGCCACCCGCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263054.11
CDS CCA 90 bp CTTTCCATCAGCCGTGACTATCCGCAGCCCCCGCGGGGCTTTCCCTaGGCACTTCTGCGGTTTGGCAGTGTACTGTTCCCTTACGCCATC +
Preference number: 5 (lower is better)
Translates to: LSISRDYPQPPRGFP*ALLRFGSVLFPYAI
Trigger: GATGGCGTAAGGGAACAGTACACTGCCAAACCGCAGAAGTGCCCAGGGAAAGCCCCGCGGGGGCTGCGGATAGTCACGGCTGATGGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS GCA 90 bp GCCGTGACTATCCGCAGCCCCCGCGGGGCTTTCCCTGGGCACTTCTaGGGTTTGGCAGTGTACTGTTCCCTTACGCCATCAGTGCAATTA +
Preference number: 5 (lower is better)
Translates to: AVTIRSPRGAFPGHF*GLAVYCSLTPSVQL
Trigger: TAATTGCACTGATGGCGTAAGGGAACAGTACACTGCCAAACCGCAGAAGTGCCCAGGGAAAGCCCCGCGGGGGCTGCGGATAGTCACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTCTTGGAGCTGTGTCTTaGCTGGCAATGATCCCTGAT +
Preference number: 5 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASLGAVS*LAMIPD
Trigger: ATCAGGGATCATTGCCAGCAAAGACACAGCTCCAAG...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTAGTGACGTTGTGTCCTaGTTCCGCTGTCAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: APADPRFGVEGGVACLALSDVVS*FRCQLS
Trigger: GGAAAGCTGACAGCGGAACAAGGACACAACGTCACT...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGGCGGAGTGGCGTGTCTaGCTCTTTGCAATCGGAGAG +
Preference number: 5 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLAEWRV*LFAIGE
Trigger: CTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGC...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAGGGCACTTCTGCGGTTaGGCAGTGTACTGTTCCCTT +
Preference number: 5 (lower is better)
Translates to: QQIPALALKAEWRVLLFAGHFCG*AVYCSL
Trigger: AAGGGAACAGTACACTGCCAAACCGCAGAAGTGCCC...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp TACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTATCAAAGGCTCCGTGTaGTTTCCGTACCACCACACG +
Preference number: 5 (lower is better)
Translates to: YCAPADPRFGVEGGVACLIKGSV*FPYHHT
Trigger: CGTGTGGTGGTACGGAAACAACACGGAGCCTTTGAT...AAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGCGGAGTGGCGTGTCTaGCTCTTTGCAATCGGAGAG +
Preference number: 5 (lower is better)
Translates to: IPALALKAEWRVLLFAIGAEWRV*LFAIGE
Trigger: CTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGC...TCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGATCCCCGCTTTGGCGTaGAAGGCGGAGTGGCGTGTC +
Preference number: 5 (lower is better)
Translates to: FGVEGGVACLALCNRRDEIPALA*KAEWRV
Trigger: GACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGCAGCAGATCCCCGCTTaGGCGTTGAAGGCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: FGVEGGVACLALCNRRDEQQIPA*ALKAEW
Trigger: CCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS GCA 90 bp CCACCACACGTAAGTGAGGGTGCCCACTTGGCTGGGCCACAGCACTaGCGTCGCATTGACCTCTTTGTTCTTTGTGGTGACAAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: PPHVSEGAHLAGPQH*RRIDLFVLCGDKGK
Trigger: CTTCCCTTTGTCACCACAAAGAACAAAGAGGTCAATGCGACGGCAGTGCTGTGGCCCAGCCAAGTGGGCACCCTCACTTACGTGTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000486192.1
ENST00000612154.4
ENST00000622431.4
CDS CCA 90 bp CTATCCGCAGCCCCCGCGGGGCTTTCCCTGGGCACTTCTGCGGTTTaGCAGTGTACTGTTCCCTTACGCCATCAGTGCAATTATTGGAAA +
Preference number: 5 (lower is better)
Translates to: LSAAPAGLSLGTSAV*QCTVPLRHQCNYWK
Trigger: TTTCCAATAATTGCACTGATGGCGTAAGGGAACAGTACACTGCCAAACCGCAGAAGTGCCCAGGGAAAGCCCCGCGGGGGCTGCGGATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAGACAGAGAGGATGGATaGAACCAAAATGCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: QQIPALALKAEWRVLLFADREDG*NQNAGR
Trigger: CCTGCCGGCATTTTGGTTCAATCCATCCTCTCTGTC...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGTGACGTTGTGTCCTaGTTCCGCTGTCAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: DPRFGVEGGVACLALCNRSDVVS*FRCQLS
Trigger: GGAAAGCTGACAGCGGAACAAGGACACAACGTCACT...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGATCAGAACCCAGACTGTaGTCCACCTGCACGGTCACA +
Preference number: 5 (lower is better)
Translates to: IPALALKAEWRVLLFAIGSEPRL*STCTVT
Trigger: TGTGACCGTGCAGGTGGACAACAGTCTGGGTTCTGA...TCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp TACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTAGCACTGCCGTCGCATaGACCTCTTTGTTCTTTGTG +
Preference number: 5 (lower is better)
Translates to: YCAPADPRFGVEGGVACLSTAVA*TSLFFV
Trigger: CACAAAGAACAAAGAGGTCAATGCGACGGCAGTGCT...AAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTCATGTTCTCAGAGTATaGTCCACATGCACAGGCTTA +
Preference number: 5 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASHVLRV*STCTGL
Trigger: TAAGCCTGTGCATGTGGACAATACTCTGAGAACATG...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTCAACTTACTTGGGGTTaGGAGGGAAGAGATTCAAAG +
Preference number: 5 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASQLTWG*EGRDSK
Trigger: CTTTGAATCTCTTCCCTCCAAACCCCAAGTAAGTTG...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCACGTCACAGGAGGAAATaGCCCTGCGAAATTGTCACA +
Preference number: 5 (lower is better)
Translates to: QQIPALALKAEWRVLLFARHRRK*PCEIVT
Trigger: TGTGACAATTTCGCAGGGCAATTTCCTCCTGTGACG...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CAA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCATGGTACAACCCCTTCTaGGATAAGCTGCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: QQIPALALKAEWRVLLFAWYNPF*DKLPSS
Trigger: AGAAGATGGCAGCTTATCCAAGAAGGGGTTGTACCA...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CAA 90 bp TACTGTGCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTCGCCAGTCTCTGCCTTaGTTATATGTGATGAAAGTC +
Preference number: 5 (lower is better)
Translates to: YCAPADPRFGVEGGVACLRQSLP*LYVMKV
Trigger: GACTTTCATCACATATAACAAAGGCAGAGACTGGCG...AAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGCACAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp GCCCCAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTACCAAAGATGTCGAATaGGGAGAGATGTGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: APADPRFGVEGGVACLALTKDVE*GEMCVS
Trigger: TGAAACACACATCTCTCCCAATTCGACATCTTTGGT...AAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCATCAGAACCCAGACTGTaGTCCACCTGCACGGTCACA +
Preference number: 5 (lower is better)
Translates to: VEGGVACLALCNRRDESPSEPRL*STCTVT
Trigger: TGTGACCGTGCAGGTGGACAACAGTCTGGGTTCTGA...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAAGCACTGCCGTCGCATaGACCTCTTTGTTCTTTGTG +
Preference number: 5 (lower is better)
Translates to: IPALALKAEWRVLLFAIGSTAVA*TSLFFV
Trigger: CACAAAGAACAAAGAGGTCAATGCGACGGCAGTGCT...TCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGGGGCACTTCTGCGGTTaGGCAGTGTACTGTTCCCTT +
Preference number: 5 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGGHFCG*AVYCSL
Trigger: AAGGGAACAGTACACTGCCAAACCGCAGAAGTGCCC...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
53% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGACCATGAGAGTGACGTaGTGTCCTTGTTCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: FGVEGGVACLALCNRRDETMRVT*CPCSAV
Trigger: GACAGCGGAACAAGGACACAACGTCACTCTCATGGT...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGATCGCCAAAGTCCACTaGGATGAGTGTCCGCTGAAC +
Preference number: 5 (lower is better)
Translates to: FGVEGGVACLALCNRRDEIAKVH*DECPLN
Trigger: GTTCAGCGGACACTCATCCAAGTGGACTTTGGCGAT...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGATACTGCGATGGTCTTaGTGTCTTGTAGGATGGCAT +
Preference number: 5 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLILRWS*CLVGWH
Trigger: ATGCCATCCTACAAGACACAAAGACCATCGCAGTAT...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGTGTAGTCATCCAGGTTaGGAGAAAAGGACAAGCGAA +
Preference number: 5 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLCSHPG*EKRTSE
Trigger: TTCGCTTGTCCTTTTCTCCAAACCTGGATGACTACA...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATTCCACCAGGGATTTTTaGATGACTCGACCGATGTCC +
Preference number: 5 (lower is better)
Translates to: RFGVEGGVACLALCNRRDSTRDF*MTRPMS
Trigger: GGACATCGGTCGAGTCATCAAAAAATCCCTGGTGGA...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCATGTACTGAGTTTTGGTaGAGCGTGTGGATCAGCAAT +
Preference number: 5 (lower is better)
Translates to: QQIPALALKAEWRVLLFACTEFW*SVWISN
Trigger: ATTGCTGATCCACACGCTCAACCAAAACTCAGTACA...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp AGGGCTCAGAAACTTGTGAGTAGTGGGGGCAGGGGCGGCACAGGCCAGGCCAGTAGTACATGGCCAGGTTaGAATTACTTTGCATATATC +
Preference number: 5 (lower is better)
Translates to: RAQKLVSSGGRGGTGQASSTWPG*NYFAYI
Trigger: GATATATGCAAAGTAATTCAAACCTGGCCATGTACT...ACTGGCCTGGCCTGTGCCGCCCCTGCCCCCACTACTCACAAGTTTCTGAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS TCA 90 bp GGTAACTCTGTCCCAAGCTGCAATCCTTTGACAGAGAGGATGGATTaGACCAAAATGCCGGCAGGCACTGGCCATTGCTGTGTCGCTCAT +
Preference number: 5 (lower is better)
Translates to: GNSVPSCNPLTERMD*TKMPAGTGHCCVAH
Trigger: ATGAGCGACACAGCAATGGCCAGTGCCTGCCGGCATTTTGGTTCAATCCATCCTCTCTGTCAAAGGATTGCAGCTTGGGACAGAGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000472196.1
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGCAGAATCCAGTCTTCTaGTTTGGGGTGAAAAAGCAA +
Preference number: 5 (lower is better)
Translates to: DPRFGVEGGVACLALCNRQNPVF*FGVKKQ
Trigger: TTGCTTTTTCACCCCAAACAAGAAGACTGGATTCTG...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CAA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATAACCAGGACTCCACCTaGATCCAGGTACAAAACACT +
Preference number: 5 (lower is better)
Translates to: RFGVEGGVACLALCNRRDNQDST*IQVQNT
Trigger: AGTGTTTTGTACCTGGATCAAGGTGGAGTCCTGGTT...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAAGTGACGTTGTGTCCTaGTTCCGCTGTCAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSSDVVS*FRCQLS
Trigger: GGAAAGCTGACAGCGGAACAAGGACACAACGTCACT...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTCAGAACCCAGACTGTaGTCCACCTGCACGGTCACA +
Preference number: 5 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVSEPRL*STCTVT
Trigger: TGTGACCGTGCAGGTGGACAACAGTCTGGGTTCTGA...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATATACTGCGATGGTCTTaGTGTCTTGTAGGATGGCAT +
Preference number: 5 (lower is better)
Translates to: ADPRFGVEGGVACLALCNILRWS*CLVGWH
Trigger: ATGCCATCCTACAAGACACAAAGACCATCGCAGTAT...ATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCCACCAGGGATTTTTaGATGACTCGACCGATGTCC +
Preference number: 5 (lower is better)
Translates to: FGVEGGVACLALCNRRDESTRDF*MTRPMS
Trigger: GGACATCGGTCGAGTCATCAAAAAATCCCTGGTGGA...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp GCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATTCATCAGTTGACCTTTaGTTTTCTCCAGCTGGATCC +
Preference number: 5 (lower is better)
Translates to: ADPRFGVEGGVACLALCNSSVDL*FSPAGS
Trigger: GGATCCAGCTGGAGAAAACAAAAGGTCAACTGATGA...ATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGAATCCCCGCTTTGGCGTaGAAGGCGGAGTGGCGTGTC +
Preference number: 5 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGIPALA*KAEWRV
Trigger: GACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp ATGTTTCCAGGTGGGAAAAGGCAGGGATATTTGAAAAAGGCAGGTTCTAGAGGACAGCAGATCCCCGCTTaGGCGTTGAAGGCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: MFPGGKRQGYLKKAGSRGQQIPA*ALKAEW
Trigger: CCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG...TCCTCTAGAACCTGCCTTTTTCAAATATCCCTGCCTTTTCCCACCTGGAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCCAGCAGATCCCCGCTTaGGCGTTGAAGGCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSQQIPA*ALKAEW
Trigger: CCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGCTCCTGTGCACGTCTTaGTGTCTTATGAAAGGAGCT +
Preference number: 5 (lower is better)
Translates to: EVLLSEQHLASLISYRWELLCTS*CLMKGA
Trigger: AGCTCCTTTCATAAGACACAAAGACGTGCACAGGAG...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCACTTCAACTCGCATCTTaGTTCCTGTGGCCACAGAGA +
Preference number: 5 (lower is better)
Translates to: VEGGVACLALCNRRDESPLQLAS*FLWPQR
Trigger: TCTCTGTGGCCACAGGAACAAAGATGCGAGTTGAAG...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CAA 90 bp GAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGATGGGAGACTCCCTGTGCTGGTTaGAGTGAGCCTCTTTTGATT +
Preference number: 5 (lower is better)
Translates to: EVLLSEQHLASLISYRWETPCAG*SEPLLI
Trigger: AATCAAAAGAGGCTCACTCAAACCAGCACAGGGAGT...CTCCCATCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCATCTAGCTGGCCATCTTaGGTCACTTCCCAAAATGCC +
Preference number: 5 (lower is better)
Translates to: VEGGVACLALCNRRDESPSSWPS*VTSQNA
Trigger: GGCATTTTGGGAAGTGACCAAAGATGGCCAGCTAGA...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CAA 90 bp GTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTCACCATCCAGGTACCACACTTaGAGAACAACTGGCCAAGGT +
Preference number: 5 (lower is better)
Translates to: VEGGVACLALCNRRDESPSRYHT*RTTGQG
Trigger: ACCTTGGCCAGTTGTTCTCAAAGTGTGGTACCTGGA...TGGTGACTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CAA 90 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGATTGCCTTCTGGGATTTaGGAAAACGTTGCAGTATCG +
Preference number: 5 (lower is better)
Translates to: IPALALKAEWRVLLFAIGLPSGI*ENVAVS
Trigger: CGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAA...TCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS TCA 90 bp GGACTCGGACTCCTGGCTTCAGCTCGAAGTGTACTGAGTTTTGGTTaGGCGTGTGGATCAGCAATTCTGATATCTGCTCCAGGTCATCAG +
Preference number: 5 (lower is better)
Translates to: GLGLLASARSVLSFG*ACGSAILISAPGHQ
Trigger: CTGATGACCTGGAGCAGATATCAGAATTGCTGATCCACACGCTCAACCAAAACTCAGTACACTTCGAGCTGAAGCCAGGAGTCCGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000452214.5
ENST00000473866.1
ENST00000612154.4
ENST00000622431.4
CDS TCA 90 bp TCCTGCAAACCCTGCCCAGCCCTCTGGTCCACCAGCCTTAGCCTCTaGGGCCTCTCCTTCTTATATACTATTAAAGCAAATGCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: SCKPCPALWSTSLSL*GLSFLYTIKANALL
Trigger: GAGCAAAGCATTTGCTTTAATAGTATATAAGAAGGAGAGGCCTCAGAGGCTAAGGCTGGTGGACCAGAGGGCTGGGCAGGGTTTGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS GCA 90 bp GTGGTTATGTCAAGCCAGAAAGGGGTTAGAGAGAGAGTCAGCCATTaGCTACTCAGCCGAACAGCTGGTGGCTACTGGGAATCATTTACC +
Preference number: 5 (lower is better)
Translates to: VVMSSQKGVRERVSH*LLSRTAGGYWESFT
Trigger: GGTAAATGATTCCCAGTAGCCACCAGCTGTTCGGCTGAGTAGGCAATGGCTGACTCTCTCTCTAACCCCTTTCTGGCTTGACATAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CCA 90 bp TCAGCCGAACAGCTGGTGGCTACTGGGAATCATTTACCTATGAGCTaGGATTCCACCTTCTCATCTATAAGCTGGCCAGGCCTCCTTAGT +
Preference number: 5 (lower is better)
Translates to: SAEQLVATGNHLPMS*DSTFSSISWPGLLS
Trigger: ACTAAGGAGGCCTGGCCAGCTTATAGATGAGAAGGTGGAATCCCAGCTCATAGGTAAATGATTCCCAGTAGCCACCAGCTGTTCGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS-3UTR CAA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGCTTGGAGCTGTGTCTTaGCTGGCAATGATCCCTGAT +
Preference number: 5 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGLGAVS*LAMIPD
Trigger: ATCAGGGATCATTGCCAGCAAAGACACAGCTCCAAG...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp ATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGATGTGAAACTGTATTaGCTCCAAGATCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: IPALALKAEWRVLLFAIGDVKLY*LQDLPS
Trigger: TGAAGGGAGATCTTGGAGCAAATACAGTTTCACATC...TCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGACCATGAGAGTGACGTaGTGTCCTTGTTCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVTMRVT*CPCSAV
Trigger: GACAGCGGAACAAGGACACAACGTCACTCTCATGGT...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGATCGCCAAAGTCCACTaGGATGAGTGTCCGCTGAAC +
Preference number: 5 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGIAKVH*DECPLN
Trigger: GTTCAGCGGACACTCATCCAAGTGGACTTTGGCGAT...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAAATCAAAGGCTCCGTGTaGTTTCCGTACCACCACACG +
Preference number: 5 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKIKGSV*FPYHHT
Trigger: CGTGTGGTGGTACGGAAACAACACGGAGCCTTTGAT...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATCCACTGCTCTCAAAGTaGCTGTTTGGAACTTCTGAA +
Preference number: 5 (lower is better)
Translates to: RFGVEGGVACLALCNRRDPLLSK*LFGTSE
Trigger: TTCAGAAGTTCCAAACAGCAACTTTGAGAGCAGTGG...ATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CAA 90 bp CAGCAGATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCATGGACTGATCATCTCTaGTTCTTTCTCATTCTGCAT +
Preference number: 5 (lower is better)
Translates to: QQIPALALKAEWRVLLFAWTDHL*FFLILH
Trigger: ATGCAGAATGAGAAAGAACAAGAGATGATCAGTCCA...TGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGGATGAAAGTCTTCACTaGGTTGTCAATCTTCTTGTT +
Preference number: 5 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLDESLH*VVNLLV
Trigger: AACAAGAAGATTGACAACCAAGTGAAGACTTTCATC...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCAACCATAAACCTTGGAGCTGTGTCTTaGCTGGCAATGATCCCTGAT +
Preference number: 5 (lower is better)
Translates to: ASGLAHFPDSYGVSSTINLGAVS*LAMIPD
Trigger: ATCAGGGATCATTGCCAGCAAAGACACAGCTCCAAG...GTTTATGGTTGAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGCCATCAGTGCAATTATaGGAAACCACCTTCCTGTAC +
Preference number: 5 (lower is better)
Translates to: FGVEGGVACLALCNRRDEPSVQL*ETTFLY
Trigger: GTACAGGAAGGTGGTTTCCAATAATTGCACTGATGG...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGTGTAGTCATCCAGGTTaGGAGAAAAGGACAAGCGAA +
Preference number: 5 (lower is better)
Translates to: FGVEGGVACLALCNRRDECSHPG*EKRTSE
Trigger: TTCGCTTGTCCTTTTCTCCAAACCTGGATGACTACA...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTCCACCAGGGATTTTTaGATGACTCGACCGATGTCC +
Preference number: 5 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVSTRDF*MTRPMS
Trigger: GGACATCGGTCGAGTCATCAAAAAATCCCTGGTGGA...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGCAGAAGCTGGCATGCTaGGGAATGTACAAAACTGAC +
Preference number: 5 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGQKLAC*GMYKTD
Trigger: GTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCTG...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GATCCCCGCTTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAATTGCCCTGCGAAATaGTCACACATTCAAAACATT +
Preference number: 5 (lower is better)
Translates to: DPRFGVEGGVACLALCNRNCPAK*SHIQNI
Trigger: AATGTTTTGAATGTGTGACAATTTCGCAGGGCAATT...CCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS-3UTR CAA 90 bp ACCCTGCTGTGCAGGATGCAGCAAGGTCCATGGGCACAGAAGCTGGCATGCTTGAATTGCCCTGCGAAATaGTCACACATTCAAAACATT +
Preference number: 5 (lower is better)
Translates to: TLLCRMQQGPWAQKLACLNCPAK*SHIQNI
Trigger: AATGTTTTGAATGTGTGACAATTTCGCAGGGCAATT...CAAGCATGCCAGCTTCTGTGCCCATGGACCTTGCTGCATCCTGCACAGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGAGCCCACCAAACTCCTaGTGTGTTTGCACCTGCGAT +
Preference number: 5 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSESPPNS*CVCTCD
Trigger: ATCGCAGGTGCAAACACACAAGGAGTTTGGTGGGCT...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS GCA 90 bp AATCTGCTCTGTAATAGTCTCACCCACCAGTGGTCTCTCTCAGGATaGTCTACTGCCTGGATGTCTGCAAACATTATGCCTCTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: NLLCNSLTHQWSLSG*STAWMSANIMPLVL
Trigger: GAGGACAAGAGGCATAATGTTTGCAGACATCCAGGCAGTAGAGCATCCTGAGAGAGACCACTGGTGGGTGAGACTATTACAGAGCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS-3UTR CAA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTGGTACAACCCCTTCTaGGATAAGCTGCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVWYNPF*DKLPSS
Trigger: AGAAGATGGCAGCTTATCCAAGAAGGGGTTGTACCA...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp AACAATGAGGTCCTCCTCTCTGAGCAGCACCTTGCCTCACTAATCTCCTACAGAACCAGTAGAACCTGTTaGGTACAACCCCTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: NNEVLLSEQHLASLISYRTSRTC*VQPLLG
Trigger: TCCAAGAAGGGGTTGTACCAAACAGGTTCTACTGGT...TCTGTAGGAGATTAGTGAGGCAAGGTGCTGCTCAGAGAGGAGGACCTCATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAAACCAGTAGAACCTGTTaGGTACAACCCCTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKTSRTC*VQPLLG
Trigger: TCCAAGAAGGGGTTGTACCAAACAGGTTCTACTGGT...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGCTTCTGACAGCAGCTTaGCTATTCTTTCTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVLLTAA*LFFLCL
Trigger: CAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAG...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS GCA 90 bp GGTCTCTCTCAGGATGCTCTACTGCCTGGATGTCTGCAAACATTATaGCTCTTGTCCTCAATCTTAGGTTCCAAATCTCCTGAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: GLSQDALLPGCLQTL*LLSSILGSKSPEGK
Trigger: CTTTCCCTCAGGAGATTTGGAACCTAAGATTGAGGACAAGAGGCATAATGTTTGCAGACATCCAGGCAGTAGAGCATCCTGAGAGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CCA 90 bp AATAGTCTCACCCACCAGTGGTCTCTCTCAGGATGCTCTACTGCCTaGATGTCTGCAAACATTATGCCTCTTGTCCTCAATCTTAGGTTC +
Preference number: 5 (lower is better)
Translates to: NSLTHQWSLSGCSTA*MSANIMPLVLNLRF
Trigger: GAACCTAAGATTGAGGACAAGAGGCATAATGTTTGCAGACATCCAGGCAGTAGAGCATCCTGAGAGAGACCACTGGTGGGTGAGACTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS-3UTR CAA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGTCAGCTTCTCATAGGTaGTTCCATAATCGGTTGACC +
Preference number: 5 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGSASHR*FHNRLT
Trigger: GGTCAACCGATTATGGAACAACCTATGAGAAGCTGA...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGCGCCAGTCTCTGCCTTaGTTATATGTGATGAAAGTC +
Preference number: 5 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGRQSLP*LYVMKV
Trigger: GACTTTCATCACATATAACAAAGGCAGAGACTGGCG...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGAACCAGGACTCCACCTaGATCCAGGTACAAAACACT +
Preference number: 5 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSENQDST*IQVQNT
Trigger: AGTGTTTTGTACCTGGATCAAGGTGGAGTCCTGGTT...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TCAGTTGGATTCCTGGAAAACACAGAACAGCTGCCAAGCACCCCACTGCTCTCAACCAAAGATGTCGAATaGGGAGAGATGTGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: SVGFLENTEQLPSTPLLSTKDVE*GEMCVS
Trigger: TGAAACACACATCTCTCCCAATTCGACATCTTTGGT...TGAGAGCAGTGGGGTGCTTGGCAGCTGTTCTGTGTTTTCCAGGAATCCAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGGATGTGAAACTGTATTaGCTCCAAGATCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGDVKLY*LQDLPS
Trigger: TGAAGGGAGATCTTGGAGCAAATACAGTTTCACATC...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACGGGCACTTCTGCGGTTaGGCAGTGTACTGTTCCCTT +
Preference number: 5 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNGHFCG*AVYCSL
Trigger: AAGGGAACAGTACACTGCCAAACCGCAGAAGTGCCC...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCATCGCCAAAGTCCACTaGGATGAGTGTCCGCTGAAC +
Preference number: 5 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSIAKVH*DECPLN
Trigger: GTTCAGCGGACACTCATCCAAGTGGACTTTGGCGAT...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CAATGGGTAACTAATGGGATTCCATTTCCTACTGCAGTTGGGGCAGGAGTAGGGTGTACTGAGTTTTGGTaGAGCGTGTGGATCAGCAAT +
Preference number: 5 (lower is better)
Translates to: QWVTNGIPFPTAVGAGVGCTEFW*SVWISN
Trigger: ATTGCTGATCCACACGCTCAACCAAAACTCAGTACA...CCCTACTCCTGCCCCAACTGCAGTAGGAAATGGAATCCCATTAGTTACCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAAATCCCCGCTTTGGCGTaGAAGGCGGAGTGGCGTGTC +
Preference number: 5 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQIPALA*KAEWRV
Trigger: GACACGCCACTCCGCCTTCAACGCCAAAGCGGGGAT...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGCTTCTGACAGCAGCTTaGCTATTCTTTCTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSELLTAA*LFFLCL
Trigger: CAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAG...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATTCCAGGTACCACACTTaGAGAACAACTGGCCAAGGT +
Preference number: 5 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYSRYHT*RTTGQG
Trigger: ACCTTGGCCAGTTGTTCTCAAAGTGTGGTACCTGGA...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GAAGTCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGATTACTGCCTTCTGTTaGAGATTCAGCTGGAATGGC +
Preference number: 5 (lower is better)
Translates to: EVMDIRIFRTPSLSPGPVITAFC*RFSWNG
Trigger: GCCATTCCAGCTGAATCTCAAACAGAAGGCAGTAAT...CACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TTTGGCGTTGAAGGCGGAGTGGCGTGTCTTGCTCTTTGCAATCGGAGAGATGAGGATGAAAGTCTTCACTaGGTTGTCAATCTTCTTGTT +
Preference number: 5 (lower is better)
Translates to: FGVEGGVACLALCNRRDEDESLH*VVNLLV
Trigger: AACAAGAAGATTGACAACCAAGTGAAGACTTTCATC...CTCATCTCTCCGATTGCAAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369698.5
ENST00000612154.4
CDS-3UTR CAA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGCGCCAGTCTCTGCCTTaGTTATATGTGATGAAAGTC +
Preference number: 5 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSERQSLP*LYVMKV
Trigger: GACTTTCATCACATATAACAAAGGCAGAGACTGGCG...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp ACTTTGAGAACAACTGGCCAAGGTCCTAAGAACAATGAGGTCCTCCTCTCTGAGCCATCAGTGCAATTATaGGAAACCACCTTCCTGTAC +
Preference number: 5 (lower is better)
Translates to: TLRTTGQGPKNNEVLLSEPSVQL*ETTFLY
Trigger: GTACAGGAAGGTGGTTTCCAATAATTGCACTGATGG...CTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTTGTTCTCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTACCATGAGAGTGACGTaGTGTCCTTGTTCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLTMRVT*CPCSAV
Trigger: GACAGCGGAACAAGGACACAACGTCACTCTCATGGT...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCAGCACTGCCGTCGCATaGACCTCTTTGTTCTTTGTG +
Preference number: 5 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSSTAVA*TSLFFV
Trigger: CACAAAGAACAAAGAGGTCAATGCGACGGCAGTGCT...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTATCAAAGGCTCCGTGTaGTTTCCGTACCACCACACG +
Preference number: 5 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLIKGSV*FPYHHT
Trigger: CGTGTGGTGGTACGGAAACAACACGGAGCCTTTGAT...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp ATGTTTCCAGGTGGGAAAAGGCAGGGATATTTGAAAAAGGCAGGTTCTAGAGGATCTAGCTGGCCATCTTaGGTCACTTCCCAAAATGCC +
Preference number: 5 (lower is better)
Translates to: MFPGGKRQGYLKKAGSRGSSWPS*VTSQNA
Trigger: GGCATTTTGGGAAGTGACCAAAGATGGCCAGCTAGA...TCCTCTAGAACCTGCCTTTTTCAAATATCCCTGCCTTTTCCCACCTGGAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATAAACTCCTTGTGTGTTaGCACCTGCGATTAGCGAGT +
Preference number: 5 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYKLLVC*HLRLAS
Trigger: ACTCGCTAATCGCAGGTGCAAACACACAAGGAGTTT...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGAGCCCACCAAACTCCTaGTGTGTTTGCACCTGCGAT +
Preference number: 5 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKSPPNS*CVCTCD
Trigger: ATCGCAGGTGCAAACACACAAGGAGTTTGGTGGGCT...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS CCA 90 bp CACATAATGATCCTGAACAATCAAAGAGTCTGGGTCAATGTAGCCTaGAAAAGGCTGATTCCTGTTGGCCTCTGTACAGTTCTGCATTCG +
Preference number: 5 (lower is better)
Translates to: HIMILNNQRVWVNVA*KRLIPVGLCTVLHS
Trigger: CGAATGCAGAACTGTACAGAGGCCAACAGGAATCAGCCTTTTCCAGGCTACATTGACCCAGACTCTTTGATTGTTCAGGATCATTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000612154.4
ENST00000622431.4
CDS CCA 90 bp AGGAAGAAATTTGCTAATCTGCTCTGTAATAGTCTCACCCACCAGTaGTCTCTCTCAGGATGCTCTACTGCCTGGATGTCTGCAAACATT +
Preference number: 5 (lower is better)
Translates to: RKKFANLLCNSLTHQ*SLSGCSTAWMSANI
Trigger: AATGTTTGCAGACATCCAGGCAGTAGAGCATCCTGAGAGAGACCACTGGTGGGTGAGACTATTACAGAGCAGATTAGCAAATTTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS-3UTR CAA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCTTGTTCCATAATCGGTaGACCTCCAAAGCGAGCTCT +
Preference number: 5 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSLFHNR*TSKASS
Trigger: AGAGCTCGCTTTGGAGGTCAACCGATTATGGAACAA...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGAGGTCTGGTTCTTTATTaGACCCCATCACAGACCAGT +
Preference number: 5 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGGLVLY*TPSQTS
Trigger: ACTGGTCTGTGATGGGGTCAAATAAAGAACCAGACC...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACGACAGAGAGGATGGATaGAACCAAAATGCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDDREDG*NQNAGR
Trigger: CCTGCCGGCATTTTGGTTCAATCCATCCTCTCTGTC...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCCGATGCAGTGAGTGTTaGTTTGTTTGTTTGGATTTT +
Preference number: 5 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILRCSEC*FVCLDF
Trigger: AAAATCCAAACAAACAAACAAACACTCACTGCATCG...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TTGACAAGAGCGAAATTCTTTCCTGATCAGCAGGTCGCCTGTAGCCTTTGGGGGATTCTCTCAGACTGTTaGACACTCTTAAACACAAAG +
Preference number: 5 (lower is better)
Translates to: LTRAKFFPDQQVACSLWGILSDC*TLLNTK
Trigger: CTTTGTGTTTAAGAGTGTCAAACAGTCTGAGAGAAT...CCCCCAAAGGCTACAGGCGACCTGCTGATCAGGAAAGAATTTCGCTCTTGTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp ATAGGTGACTGCCTCAGGCCTAGCCCATTTCCCAGATTCATATGGGGTATCCTCATTCTCTCAGACTGTTaGACACTCTTAAACACAAAG +
Preference number: 5 (lower is better)
Translates to: IGDCLRPSPFPRFIWGILILSDC*TLLNTK
Trigger: CTTTGTGTTTAAGAGTGTCAAACAGTCTGAGAGAAT...GAGGATACCCCATATGAATCTGGGAAATGGGCTAGGCCTGAGGCAGTCACCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GAGTGGAAATACCAGGTAACAGCAACCGTCACAGGAGGAAATTGCCCTGCGAAATGGACTGATCATCTCTaGTTCTTTCTCATTCTGCAT +
Preference number: 5 (lower is better)
Translates to: EWKYQVTATVTGGNCPAKWTDHL*FFLILH
Trigger: ATGCAGAATGAGAAAGAACAAGAGATGATCAGTCCA...TTTCGCAGGGCAATTTCCTCCTGTGACGGTTGCTGTTACCTGGTATTTCCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612154.4
CDS TCA 90 bp AGATCTGTCTCCAGGTGTTCCCTGCATCTGAAGAGACAAACATGCTaGTGTCAGTGTCTGACAATTCAGAACCTATATTACCTGATGCCA +
Preference number: 5 (lower is better)
Translates to: RSVSRCSLHLKRQTC*CQCLTIQNLYYLMP
Trigger: TGGCATCAGGTAATATAGGTTCTGAATTGTCAGACACTGACATCAGCATGTTTGTCTCTTCAGATGCAGGGAACACCTGGAGACAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS GCA 90 bp TTGCTTCTTACTATCTTTTCTAGCAGAACACATCTTAGGTGTCAGTaGTGGCATCTTCATGGAAAGGAACATGGAGCTGCTCCAGGTCAT +
Preference number: 5 (lower is better)
Translates to: LLLTIFSSRTHLRCQ*WHLHGKEHGAAPGH
Trigger: ATGACCTGGAGCAGCTCCATGTTCCTTTCCATGAAGATGCCAGCACTGACACCTAAGATGTGTTCTGCTAGAAAAGATAGTAAGAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478809.2
CDS CCA 90 bp TGTCAGCTGAACAAACACATAATGATCCTGAACAATCAAAGAGTCTaGGTCAATGTAGCCTGGAAAAGGCTGATTCCTGTTGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: CQLNKHIMILNNQRV*VNVAWKRLIPVGLC
Trigger: ACAGAGGCCAACAGGAATCAGCCTTTTCCAGGCTACATTGACCCAGACTCTTTGATTGTTCAGGATCATTATGTGTTTGTTCAGCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTTTGTTCCATAATCGGTaGACCTCCAAAGCGAGCTCT +
Preference number: 5 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLLFHNR*TSKASS
Trigger: AGAGCTCGCTTTGGAGGTCAACCGATTATGGAACAA...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTGGTCTGGTTCTTTATTaGACCCCATCACAGACCAGT +
Preference number: 5 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSGLVLY*TPSQTS
Trigger: ACTGGTCTGTGATGGGGTCAAATAAAGAACCAGACC...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGATTTCGGAAGCTTCATTaGGGCAAATGCATTCCTTCG +
Preference number: 5 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGFRKLH*GKCIPS
Trigger: CGAAGGAATGCATTTGCCCAAATGAAGCTTCCGAAA...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TCATGGACATCAGGATCTTTAGGACACCCTCATTATCACCAGGGCCTGTGTTATATAACATGCATGTCCTaGGGCAAAGCATATTTCGGA +
Preference number: 5 (lower is better)
Translates to: SWTSGSLGHPHYHQGLCYITCMS*GKAYFG
Trigger: TCCGAAATATGCTTTGCCCAAGGACATGCATGTTAT...ATAACACAGGCCCTGGTGATAATGAGGGTGTCCTAAAGATCCTGATGTCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGAACCAGGACTCCACCTaGATCCAGGTACAAAACACT +
Preference number: 5 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKNQDST*IQVQNT
Trigger: AGTGTTTTGTACCTGGATCAAGGTGGAGTCCTGGTT...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGCGACAGAGAGGATGGATaGAACCAAAATGCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: FAYINSFAYSICFQVGKGDREDG*NQNAGR
Trigger: CCTGCCGGCATTTTGGTTCAATCCATCCTCTCTGTC...GCCTTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCATACTGCGATGGTCTTaGTGTCTTGTAGGATGGCAT +
Preference number: 5 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSILRWS*CLVGWH
Trigger: ATGCCATCCTACAAGACACAAAGACCATCGCAGTAT...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GTAGAACATGCACAGTTTGCCTTCTGGGATTTTGGAAAACGTTGCAGTATCGGATCATCAGTTGACCTTTaGTTTTCTCCAGCTGGATCC +
Preference number: 5 (lower is better)
Translates to: VEHAQFAFWDFGKRCSIGSSVDL*FSPAGS
Trigger: GGATCCAGCTGGAGAAAACAAAAGGTCAACTGATGA...TCCGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAAACTGTGCATGTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACCTTCAACTCGCATCTTaGTTCCTGTGGCCACAGAGA +
Preference number: 5 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDLQLAS*FLWPQR
Trigger: TCTCTGTGGCCACAGGAACAAAGATGCGAGTTGAAG...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTCAGAAGCTGGCATGCTaGGGAATGTACAAAACTGAC +
Preference number: 5 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLQKLAC*GMYKTD
Trigger: GTCAGTTTTGTACATTCCCAAGCATGCCAGCTTCTG...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACCGTCACAGGAGGAAATaGCCCTGCGAAATTGTCACA +
Preference number: 5 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDRHRRK*PCEIVT
Trigger: TGTGACAATTTCGCAGGGCAATTTCCTCCTGTGACG...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp GACAAACTTCTGACAGCAGCTTTGCTATTCTTTCTGTGCCTGAACTACATGAAGACTCCCTGTGCTGGTTaGAGTGAGCCTCTTTTGATT +
Preference number: 5 (lower is better)
Translates to: DKLLTAALLFFLCLNYMKTPCAG*SEPLLI
Trigger: AATCAAAAGAGGCTCACTCAAACCAGCACAGGGAGT...CTTCATGTAGTTCAGGCACAGAAAGAATAGCAAAGCTGCTGTCAGAAGTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCTCAGCTTCTCATAGGTaGTTCCATAATCGGTTGACC +
Preference number: 5 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTSASHR*FHNRLT
Trigger: GGTCAACCGATTATGGAACAACCTATGAGAAGCTGA...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCACCAAAGATGTCGAATaGGGAGAGATGTGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSTKDVE*GEMCVS
Trigger: TGAAACACACATCTCTCCCAATTCGACATCTTTGGT...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCCATCAGTGCAATTATaGGAAACCACCTTCCTGTAC +
Preference number: 5 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNPSVQL*ETTFLY
Trigger: GTACAGGAAGGTGGTTTCCAATAATTGCACTGATGG...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTTGTAGTCATCCAGGTTaGGAGAAAAGGACAAGCGAA +
Preference number: 5 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLCSHPG*EKRTSE
Trigger: TTCGCTTGTCCTTTTCTCCAAACCTGGATGACTACA...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACCTCCTGTGCACGTCTTaGTGTCTTATGAAAGGAGCT +
Preference number: 5 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDLLCTS*CLMKGA
Trigger: AGCTCCTTTCATAAGACACAAAGACGTGCACAGGAG...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCCACTGCTCTCAAAGTaGCTGTTTGGAACTTCTGAA +
Preference number: 5 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNPLLSK*LFGTSE
Trigger: TTCAGAAGTTCCAAACAGCAACTTTGAGAGCAGTGG...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS TCA 90 bp AACATAATGATGAGATACTTGAGCACCAAGGGAGCTTGTTGTCCTTaGAGCTACAACTGCTTCTACACTCTAGGGTTCATAAGCCATTTC +
Preference number: 5 (lower is better)
Translates to: NIMMRYLSTKGACCP*SYNCFYTLGFISHF
Trigger: GAAATGGCTTATGAACCCTAGAGTGTAGAAGCAGTTGTAGCTTCAAGGACAACAAGCTCCCTTGGTGCTCAAGTATCTCATCATTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486192.1
CDS GCA 90 bp CTTACTCATTTAATGACACTGGAAAGGGAAAGGTGTCAGAGACTTTaGAATGTGCTGCGATATCTTCCTGGAGAAGGAGGAATTACTACT +
Preference number: 5 (lower is better)
Translates to: LTHLMTLERERCQRL*NVLRYLPGEGGITT
Trigger: AGTAGTAATTCCTCCTTCTCCAGGAAGATATCGCAGCACATTGCAAAGTCTCTGACACCTTTCCCTTTCCAGTGTCATTAAATGAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS-3UTR CAA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCGTGAAAAAGCAAGCTTaGAATGTAGAAGTTCAGCCG +
Preference number: 5 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTVKKQA*NVEVQP
Trigger: CGGCTGAACTTCTACATTCAAAGCTTGCTTTTTCAC...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp AGGGACATAGCAAAGAAGGAGGCTGAGCATACTAAGAGGTTTATCAGAACTTCTCAGAATCCAGTCTTCTaGTTTGGGGTGAAAAAGCAA +
Preference number: 5 (lower is better)
Translates to: RDIAKKEAEHTKRFIRTSQNPVF*FGVKKQ
Trigger: TTGCTTTTTCACCCCAAACAAGAAGACTGGATTCTG...AGAAGTTCTGATAAACCTCTTAGTATGCTCAGCCTCCTTCTTTGCTATGTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TGCCTTCTGTTTGAGATTCAGCTGGAATGGCCTAGTACAATGGTTCTCAAACTTATAACATGCATGTCCTaGGGCAAAGCATATTTCGGA +
Preference number: 5 (lower is better)
Translates to: CLLFEIQLEWPSTMVLKLITCMS*GKAYFG
Trigger: TCCGAAATATGCTTTGCCCAAGGACATGCATGTTAT...AAGTTTGAGAACCATTGTACTAGGCCATTCCAGCTGAATCTCAAACAGAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACCGATGTGAAACTGTATTaGCTCCAAGATCTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: SRHVLRVLSTCTGLKLKTDVKLY*LQDLPS
Trigger: TGAAGGGAGATCTTGGAGCAAATACAGTTTCACATC...GGTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACTGTACTGAGTTTTGGTaGAGCGTGTGGATCAGCAAT +
Preference number: 5 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDCTEFW*SVWISN
Trigger: ATTGCTGATCCACACGCTCAACCAAAACTCAGTACA...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACCATGTTCTCAGAGTATaGTCCACATGCACAGGCTTA +
Preference number: 5 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDHVLRV*STCTGL
Trigger: TAAGCCTGTGCATGTGGACAATACTCTGAGAACATG...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CACCACTATTCATCCCCTAGAGTTTCTAATTCAGTAGGTATGGGGTATGGATCCTTGAGTGAGCCTCTTTaGATTTTCCAACACTTTGTC +
Preference number: 5 (lower is better)
Translates to: HHYSSPRVSNSVGMGYGSLSEPL*IFQHFV
Trigger: GACAAAGTGTTGGAAAATCAAAAGAGGCTCACTCAA...GGATCCATACCCCATACCTACTGAATTAGAAACTCTAGGGGATGAATAGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TTTGGAGGGAAGAGATTCAAAGATATCAACAGATCATGGTCACACATGGATGACATTACTGCCTTCTGTTaGAGATTCAGCTGGAATGGC +
Preference number: 5 (lower is better)
Translates to: FGGKRFKDINRSWSHMDDITAFC*RFSWNG
Trigger: GCCATTCCAGCTGAATCTCAAACAGAAGGCAGTAAT...GTCATCCATGTGTGACCATGATCTGTTGATATCTTTGAATCTCTTCCCTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS TCA 90 bp TCTCCAAATAAAAGAAAGTGCACTGTGAAAATCGGACACCAGATGTaGCTGCAGTTGTTATCATTATCTATGATAGGAGCCAGTCACTGC +
Preference number: 5 (lower is better)
Translates to: SPNKRKCTVKIGHQM*LQLLSLSMIGASHC
Trigger: GCAGTGACTGGCTCCTATCATAGATAATGATAACAACTGCAGTCACATCTGGTGTCCGATTTTCACAGTGCACTTTCTTTTATTTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS GCA 90 bp GTGCAGACACAGGGTTCAGATTCCATAGCTCCTGCATATTTTCCTTaGATACACTTCCGCTCTGATTTTCGCTTCTTATATATCCTTTTT +
Preference number: 5 (lower is better)
Translates to: VQTQGSDSIAPAYFP*IHFRSDFRFLYILF
Trigger: AAAAAGGATATATAAGAAGCGAAAATCAGAGCGGAAGTGTATGCAAGGAAAATATGCAGGAGCTATGGAATCTGAACCCTGTGTCTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000472196.1
ENST00000612154.4
ENST00000622431.4
CDS CCA 90 bp ATAACTTTTGGTCTTGACTGTATGCCAGAATCCAGTCTTCTTGTTTaGGGTGAAAAAGCAAGCTTTGAATGTAGAAGTTCAGCCGGTACT +
Preference number: 5 (lower is better)
Translates to: ITFGLDCMPESSLLV*GEKASFECRSSAGT
Trigger: AGTACCGGCTGAACTTCTACATTCAAAGCTTGCTTTTTCACCCCAAACAAGAAGACTGGATTCTGGCATACAGTCAAGACCAAAAGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CTCCAGACATGTTCTCAGAGTATTGTCCACATGCACAGGCTTAAAGCTAAAAACTTGAGTGAGCCTCTTTaGATTTTCCAACACTTTGTC +
Preference number: 5 (lower is better)
Translates to: LQTCSQSIVHMHRLKAKNLSEPL*IFQHFV
Trigger: GACAAAGTGTTGGAAAATCAAAAGAGGCTCACTCAA...GTTTTTAGCTTTAAGCCTGTGCATGTGGACAATACTCTGAGAACATGTCTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAAAAACTCCTTGTGTGTTaGCACCTGCGATTAGCGAGT +
Preference number: 5 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQKLLVC*HLRLAS
Trigger: ACTCGCTAATCGCAGGTGCAAACACACAAGGAGTTT...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TGCAGATTTCCTTGGCCTATATATGTTATGAATTTTCTACAAACACGACCGATCTCATCAGTTGACCTTTaGTTTTCTCCAGCTGGATCC +
Preference number: 5 (lower is better)
Translates to: CRFPWPIYVMNFLQTRPISSVDL*FSPAGS
Trigger: GGATCCAGCTGGAGAAAACAAAAGGTCAACTGATGA...GATCGGTCGTGTTTGTAGAAAATTCATAACATATATAGGCCAAGGAAATCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp CCTCTTTTGATTTTCCAACACTTTGTCTTCCACATTAAATTTGGGAGACTCCAATTGCCTTCTGGGATTTaGGAAAACGTTGCAGTATCG +
Preference number: 5 (lower is better)
Translates to: PLLIFQHFVFHIKFGRLQLPSGI*ENVAVS
Trigger: CGATACTGCAACGTTTTCCAAAATCCCAGAAGGCAA...TTGGAGTCTCCCAAATTTAATGTGGAAGACAAAGTGTTGGAAAATCAAAAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAATTTCGGAAGCTTCATTaGGGCAAATGCATTCCTTCG +
Preference number: 5 (lower is better)
Translates to: YFAYINSFAYSICFQVGKFRKLH*GKCIPS
Trigger: CGAAGGAATGCATTTGCCCAAATGAAGCTTCCGAAA...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAACAACTTACTTGGGGTTaGGAGGGAAGAGATTCAAAG +
Preference number: 5 (lower is better)
Translates to: YFAYINSFAYSICFQVGKQLTWG*EGRDSK
Trigger: CTTTGAATCTCTTCCCTCCAAACCCCAAGTAAGTTG...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS TCA 90 bp CACACATTTATTACCTTGCCTCTCCAAATAAAAGAAAGTGCACTGTaGAAATCGGACACCAGATGTGACTGCAGTTGTTATCATTATCTA +
Preference number: 5 (lower is better)
Translates to: HTFITLPLQIKESAL*KSDTRCDCSCYHYL
Trigger: TAGATAATGATAACAACTGCAGTCACATCTGGTGTCCGATTTTCACAGTGCACTTTCTTTTATTTGGAGAGGCAAGGTAATAAATGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS-3UTR CAA 90 bp TTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAGGCGATGAAAGTCTTCACTaGGTTGTCAATCTTCTTGTT +
Preference number: 5 (lower is better)
Translates to: FAYINSFAYSICFQVGKGDESLH*VVNLLV
Trigger: AACAAGAAGATTGACAACCAAGTGAAGACTTTCATC...GCCTTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAACGATGCAGTGAGTGTTaGTTTGTTTGTTTGGATTTT +
Preference number: 5 (lower is better)
Translates to: YFAYINSFAYSICFQVGKRCSEC*FVCLDF
Trigger: AAAATCCAAACAAACAAACAAACACTCACTGCATCG...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS-3UTR CAA 90 bp TACTTTGCATATATCAACTCTTTCGCATACAGTATATGTTTCCAGGTGGGAAAAAGTACATGGCCAGGTTaGAATTACTTTGCATATATC +
Preference number: 5 (lower is better)
Translates to: YFAYINSFAYSICFQVGKSTWPG*NYFAYI
Trigger: GATATATGCAAAGTAATTCAAACCTGGCCATGTACT...TTTTCCCACCTGGAAACATATACTGTATGCGAAAGAGTTGATATATGCAAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612154.4
ENST00000622431.4
CDS GCA 72 bp GGCCGGAGCGTGCAGCAACCGCCATGGATGCCCCAGTaGCCCGAGCCCGCTCCAGGGATAGCGCTCGGTCCC +
Preference number: 6 (lower is better)
Translates to: GRSVQQPPWMPQ*PEPAPGIALGP
Trigger: GGGACCGAGCGCTATCCCTGGAGCGGGCTCGGGGCACTGGGGCATCCATGGCGGTTGCTGCACGCTCCGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263054.11
CDS GCA 72 bp CTGATCCGCTCCGCTCCGTCTCCTCCGGCCGGAGCGTaGAGCAACCGCCATGGATGCCCCAGTGCCCCGAGC +
Preference number: 6 (lower is better)
Translates to: LIRSAPSPPAGA*SNRHGCPSAPS
Trigger: GCTCGGGGCACTGGGGCATCCATGGCGGTTGCTGCACGCTCCGGCCGGAGGAGACGGAGCGGAGCGGATCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263054.11
CDS CCA 72 bp TCCGTCTCCTCCGGCCGGAGCGTGCAGCAACCGCCATaGATGCCCCAGTGCCCCGAGCCCGCTCCAGGGATA +
Preference number: 6 (lower is better)
Translates to: SVSSGRSVQQPP*MPQCPEPAPGI
Trigger: TATCCCTGGAGCGGGCTCGGGGCACTGGGGCATCCATGGCGGTTGCTGCACGCTCCGGCCGGAGGAGACGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263054.11
CDS GCA 72 bp GCTTTGTCCGGGTCCCGCTCCCGAGTCCCAGGCTCCTaGTGCCCTCCATCTCTTAGCACTCCCCGGGGGCTC +
Preference number: 6 (lower is better)
Translates to: ALSGSRSRVPGS*CPPSLSTPRGL
Trigger: GAGCCCCCGGGGAGTGCTAAGAGATGGAGGGCAGCAGGAGCCTGGGACTCGGGAGCGGGACCCGGACAAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263054.11
CDS TCA 72 bp TGTGTCCTTGTTCCGCTGTCAGCTTTCCATCAGCCGTaGCTATCCGCAGCCCCCGCGGGGCTTTCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: CVLVPLSAFHQP*LSAAPAGLSLG
Trigger: GCCCAGGGAAAGCCCCGCGGGGGCTGCGGATAGTCACGGCTGATGGAAAGCTGACAGCGGAACAAGGACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS CCA 72 bp AGCCGTGACTATCCGCAGCCCCCGCGGGGCTTTCCCTaGGCACTTCTGCGGTTTGGCAGTGTACTGTTCCCT +
Preference number: 6 (lower is better)
Translates to: SRDYPQPPRGFP*ALLRFGSVLFP
Trigger: AGGGAACAGTACACTGCCAAACCGCAGAAGTGCCCAGGGAAAGCCCCGCGGGGGCTGCGGATAGTCACGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS TCA 72 bp CCACCTCCGTGTTGTTTCCGTACCACCACACGTAAGTaGGGGTGCCCACTTGGCTGGGCCACAGCACTGCCG +
Preference number: 6 (lower is better)
Translates to: PPPCCFRTTTRK*GCPLGWATALP
Trigger: CGGCAGTGCTGTGGCCCAGCCAAGTGGGCACCCTCACTTACGTGTGGTGGTACGGAAACAACACGGAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486192.1
CDS GCA 72 bp ATCCGCAGCCCCCGCGGGGCTTTCCCTGGGCACTTCTaGGGTTTGGCAGTGTACTGTTCCCTTACGCCATCA +
Preference number: 6 (lower is better)
Translates to: IRSPRGAFPGHF*GLAVYCSLTPS
Trigger: TGATGGCGTAAGGGAACAGTACACTGCCAAACCGCAGAAGTGCCCAGGGAAAGCCCCGCGGGGGCTGCGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS TCA 72 bp AAGGCTCCGTGTTGTTTCCGTACCACCACACGTAAGTaGGGGTGCCCACTTGGCTGGGCCACAGCACTGCCG +
Preference number: 6 (lower is better)
Translates to: KAPCCFRTTTRK*GCPLGWATALP
Trigger: CGGCAGTGCTGTGGCCCAGCCAAGTGGGCACCCTCACTTACGTGTGGTGGTACGGAAACAACACGGAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS CCA 72 bp GCCCCCGCGGGGCTTTCCCTGGGCACTTCTGCGGTTTaGCAGTGTACTGTTCCCTTACGCCATCAGTGCAAT +
Preference number: 6 (lower is better)
Translates to: APAGLSLGTSAV*QCTVPLRHQCN
Trigger: ATTGCACTGATGGCGTAAGGGAACAGTACACTGCCAAACCGCAGAAGTGCCCAGGGAAAGCCCCGCGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS CAA 72 bp AGCCCCCGCGGGGCTTTCCCTGGGCACTTCTGCGGTTaGGCAGTGTACTGTTCCCTTACGCCATCAGTGCAA +
Preference number: 6 (lower is better)
Translates to: SPRGAFPGHFCG*AVYCSLTPSVQ
Trigger: TTGCACTGATGGCGTAAGGGAACAGTACACTGCCAAACCGCAGAAGTGCCCAGGGAAAGCCCCGCGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS CAA 90 bp GTGCCCACTTGGCTGGGCCACAGCACTGCCGTCGCATTGACCTCTTaGTTCTTTGTGGTGACAAAGGGAAGAGACAGGTGCACGTGCTCC +
Preference number: 6 (lower is better)
Translates to: VPTWLGHSTAVALTS*FFVVTKGRDRCTCS
Trigger: GGAGCACGTGCACCTGTCTCTTCCCTTTGTCACCACAAAGAACAAAGAGGTCAATGCGACGGCAGTGCTGTGGCCCAGCCAAGTGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000486192.1
ENST00000612154.4
ENST00000622431.4
CDS CAA 90 bp ACTATCCGCAGCCCCCGCGGGGCTTTCCCTGGGCACTTCTGCGGTTaGGCAGTGTACTGTTCCCTTACGCCATCAGTGCAATTATTGGAA +
Preference number: 6 (lower is better)
Translates to: TIRSPRGAFPGHFCG*AVYCSLTPSVQLLE
Trigger: TTCCAATAATTGCACTGATGGCGTAAGGGAACAGTACACTGCCAAACCGCAGAAGTGCCCAGGGAAAGCCCCGCGGGGGCTGCGGATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS GCA 72 bp GTAAGTGAGGGTGCCCACTTGGCTGGGCCACAGCACTaGCGTCGCATTGACCTCTTTGTTCTTTGTGGTGAC +
Preference number: 6 (lower is better)
Translates to: VSEGAHLAGPQH*RRIDLFVLCGD
Trigger: GTCACCACAAAGAACAAAGAGGTCAATGCGACGGCAGTGCTGTGGCCCAGCCAAGTGGGCACCCTCACTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000486192.1
ENST00000612154.4
ENST00000622431.4
CDS CCA 72 bp CTGGATCCTGATAGGGTAGGACAAAGAGTTCAGCAGTaGTGGGTAAGCCAGGGAGCACCGCCACCAGGATGT +
Preference number: 6 (lower is better)
Translates to: LDPDRVGQRVQQ*WVSQGAPPPGC
Trigger: ACATCCTGGTGGCGGTGCTCCCTGGCTTACCCACCACTGCTGAACTCTTTGTCCTACCCTATCAGGATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000452214.5
ENST00000478809.2
ENST00000612154.4
ENST00000622431.4
CDS CAA 72 bp TGTAAGTACAGGACGGCGCTGTCAGAACCCAGACTGTaGTCCACCTGCACGGTCACACGGAAAATGCCCACG +
Preference number: 6 (lower is better)
Translates to: CKYRTALSEPRL*STCTVTRKMPT
Trigger: CGTGGGCATTTTCCGTGTGACCGTGCAGGTGGACAACAGTCTGGGTTCTGACAGCGCCGTCCTGTACTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000486192.1
ENST00000612154.4
ENST00000622431.4
CDS CAA 72 bp GTGCCCACTTGGCTGGGCCACAGCACTGCCGTCGCATaGACCTCTTTGTTCTTTGTGGTGACAAAGGGAAGA +
Preference number: 6 (lower is better)
Translates to: VPTWLGHSTAVA*TSLFFVVTKGR
Trigger: TCTTCCCTTTGTCACCACAAAGAACAAAGAGGTCAATGCGACGGCAGTGCTGTGGCCCAGCCAAGTGGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000486192.1
ENST00000612154.4
ENST00000622431.4
CDS TCA 72 bp GTCCCAAGCTGCAATCCTTTGACAGAGAGGATGGATTaGACCAAAATGCCGGCAGGCACTGGCCATTGCTGT +
Preference number: 6 (lower is better)
Translates to: VPSCNPLTERMD*TKMPAGTGHCC
Trigger: ACAGCAATGGCCAGTGCCTGCCGGCATTTTGGTTCAATCCATCCTCTCTGTCAAAGGATTGCAGCTTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000472196.1
ENST00000612154.4
ENST00000622431.4
CDS CCA 72 bp CCACTCAGGGATGTCCGGGTTGTAGTCATCCAGGTTTaGAGAAAAGGACAAGCGAAGAGACCGGAATTCCTC +
Preference number: 6 (lower is better)
Translates to: PLRDVRVVVIQV*RKGQAKRPEFL
Trigger: GAGGAATTCCGGTCTCTTCGCTTGTCCTTTTCTCCAAACCTGGATGACTACAACCCGGACATCCCTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000478809.2
ENST00000612154.4
ENST00000622431.4
CDS CAA 72 bp TGTCCCAAGCTGCAATCCTTTGACAGAGAGGATGGATaGAACCAAAATGCCGGCAGGCACTGGCCATTGCTG +
Preference number: 6 (lower is better)
Translates to: CPKLQSFDREDG*NQNAGRHWPLL
Trigger: CAGCAATGGCCAGTGCCTGCCGGCATTTTGGTTCAATCCATCCTCTCTGTCAAAGGATTGCAGCTTGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000472196.1
ENST00000612154.4
ENST00000622431.4
CDS GCA 72 bp TCTCACCCACCAGTGGTCTCTCTCAGGATGCTCTACTaGCTGGATGTCTGCAAACATTATGCCTCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SHPPVVSLRMLY*LDVCKHYASCP
Trigger: AGGACAAGAGGCATAATGTTTGCAGACATCCAGGCAGTAGAGCATCCTGAGAGAGACCACTGGTGGGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CCA 72 bp CAGCTGGTGGCTACTGGGAATCATTTACCTATGAGCTaGGATTCCACCTTCTCATCTATAAGCTGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: QLVATGNHLPMS*DSTFSSISWPG
Trigger: GCCTGGCCAGCTTATAGATGAGAAGGTGGAATCCCAGCTCATAGGTAAATGATTCCCAGTAGCCACCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CCA 72 bp AGCCATTGCCTACTCAGCCGAACAGCTGGTGGCTACTaGGAATCATTTACCTATGAGCTGGGATTCCACCTT +
Preference number: 6 (lower is better)
Translates to: SHCLLSRTAGGY*ESFTYELGFHL
Trigger: AAGGTGGAATCCCAGCTCATAGGTAAATGATTCCCAGTAGCCACCAGCTGTTCGGCTGAGTAGGCAATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CAA 90 bp AGGACTCGGACTCCTGGCTTCAGCTCGAAGTGTACTGAGTTTTGGTaGAGCGTGTGGATCAGCAATTCTGATATCTGCTCCAGGTCATCA +
Preference number: 6 (lower is better)
Translates to: RTRTPGFSSKCTEFW*SVWISNSDICSRSS
Trigger: TGATGACCTGGAGCAGATATCAGAATTGCTGATCCACACGCTCAACCAAAACTCAGTACACTTCGAGCTGAAGCCAGGAGTCCGAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000452214.5
ENST00000473866.1
ENST00000612154.4
ENST00000622431.4
CDS TCA 72 bp GATGCTTGGAGCTGTGTCTTTGCTGGCAATGATCCCTaGTGTGTAGGGATTCTCAGAGACCTTCAGGTGAAG +
Preference number: 6 (lower is better)
Translates to: DAWSCVFAGNDP*CVGILRDLQVK
Trigger: CTTCACCTGAAGGTCTCTGAGAATCCCTACACATCAGGGATCATTGCCAGCAAAGACACAGCTCCAAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS TCA 72 bp AAGACACCGCGATACCATCGCCAAAGTCCACTTGGATaGGTGTCCGCTGAACATCACCCTCTTCTAATTGCA +
Preference number: 6 (lower is better)
Translates to: KTPRYHRQSPLG*VSAEHHPLLIA
Trigger: TGCAATTAGAAGAGGGTGATGTTCAGCGGACACTCATCCAAGTGGACTTTGGCGATGGTATCGCGGTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS GCA 72 bp GCGGTTTGGCAGTGTACTGTTCCCTTACGCCATCAGTaGAATTATTGGAAACCACCTTCCTGTACCCAGTAC +
Preference number: 6 (lower is better)
Translates to: AVWQCTVPLRHQ*NYWKPPSCTQY
Trigger: GTACTGGGTACAGGAAGGTGGTTTCCAATAATTGCACTGATGGCGTAAGGGAACAGTACACTGCCAAACCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS CCA 72 bp CGGACTCCTGGCTTCAGCTCGAAGTGTACTGAGTTTTaGTTGAGCGTGTGGATCAGCAATTCTGATATCTGC +
Preference number: 6 (lower is better)
Translates to: RTPGFSSKCTEF*LSVWISNSDIC
Trigger: GCAGATATCAGAATTGCTGATCCACACGCTCAACCAAAACTCAGTACACTTCGAGCTGAAGCCAGGAGTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000452214.5
ENST00000473866.1
ENST00000612154.4
ENST00000622431.4
CDS CCA 72 bp ACCCACCAGTGGTCTCTCTCAGGATGCTCTACTGCCTaGATGTCTGCAAACATTATGCCTCTTGTCCTCAAT +
Preference number: 6 (lower is better)
Translates to: THQWSLSGCSTA*MSANIMPLVLN
Trigger: ATTGAGGACAAGAGGCATAATGTTTGCAGACATCCAGGCAGTAGAGCATCCTGAGAGAGACCACTGGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS TCA 72 bp CTCCTGGCTTCAGCTCGAAGTGTACTGAGTTTTGGTTaGGCGTGTGGATCAGCAATTCTGATATCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: LLASARSVLSFG*ACGSAILISAP
Trigger: TGGAGCAGATATCAGAATTGCTGATCCACACGCTCAACCAAAACTCAGTACACTTCGAGCTGAAGCCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000452214.5
ENST00000473866.1
ENST00000612154.4
ENST00000622431.4
CDS TCA 72 bp CATTTCATTCCCTCCTTTGCTTCAGGCAGCGTGAATTaGGCTTCTGTCCCTAGATCGCATGTGGAAGGTGAA +
Preference number: 6 (lower is better)
Translates to: HFIPSFASGSVN*ASVPRSHVEGE
Trigger: TTCACCTTCCACATGCGATCTAGGGACAGAAGCTCAATTCACGCTGCCTGAAGCAAAGGAGGGAATGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486192.1
CDS GCA 72 bp GGGCAAAGCATATTTCGGAAGCTTCATTTGGGCAAATaGATTCCTTCGGTAGGACACGTAGTAATGTGGCCG +
Preference number: 6 (lower is better)
Translates to: GQSIFRKLHLGK*IPSVGHVVMWP
Trigger: CGGCCACATTACTACGTGTCCTACCGAAGGAATGCATTTGCCCAAATGAAGCTTCCGAAATATGCTTTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000612154.4
ENST00000622431.4
CDS GCA 72 bp TGTAATAGTCTCACCCACCAGTGGTCTCTCTCAGGATaGTCTACTGCCTGGATGTCTGCAAACATTATGCCT +
Preference number: 6 (lower is better)
Translates to: CNSLTHQWSLSG*STAWMSANIMP
Trigger: AGGCATAATGTTTGCAGACATCCAGGCAGTAGAGCATCCTGAGAGAGACCACTGGTGGGTGAGACTATTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CCA 72 bp TTTGCTAATCTGCTCTGTAATAGTCTCACCCACCAGTaGTCTCTCTCAGGATGCTCTACTGCCTGGATGTCT +
Preference number: 6 (lower is better)
Translates to: FANLLCNSLTHQ*SLSGCSTAWMS
Trigger: AGACATCCAGGCAGTAGAGCATCCTGAGAGAGACCACTGGTGGGTGAGACTATTACAGAGCAGATTAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CAA 72 bp GAAGAGACCGGAATTCCTCATATACTGCGATGGTCTTaGTGTCTTGTAGGATGGCATTCCCAGCTGAGACCT +
Preference number: 6 (lower is better)
Translates to: EETGIPHILRWS*CLVGWHSQLRP
Trigger: AGGTCTCAGCTGGGAATGCCATCCTACAAGACACAAAGACCATCGCAGTATATGAGGAATTCCGGTCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000478809.2
ENST00000612154.4
ENST00000622431.4
CDS CAA 72 bp ACTCCTGGCTTCAGCTCGAAGTGTACTGAGTTTTGGTaGAGCGTGTGGATCAGCAATTCTGATATCTGCTCC +
Preference number: 6 (lower is better)
Translates to: TPGFSSKCTEFW*SVWISNSDICS
Trigger: GGAGCAGATATCAGAATTGCTGATCCACACGCTCAACCAAAACTCAGTACACTTCGAGCTGAAGCCAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000452214.5
ENST00000473866.1
ENST00000612154.4
ENST00000622431.4
CDS CAA 90 bp CTTAGATCCGTGTCCGGCGCCTGCAGCAAACGCCAGTCTCTGCCTTaGTTATATGTGATGAAAGTCTTCACTTGGTTGTCAATCTTCTTG +
Preference number: 6 (lower is better)
Translates to: LRSVSGACSKRQSLP*LYVMKVFTWLSIFL
Trigger: CAAGAAGATTGACAACCAAGTGAAGACTTTCATCACATATAACAAAGGCAGAGACTGGCGTTTGCTGCAGGCGCCGGACACGGATCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS CCA 72 bp CTGAGGGACATTGGGCCTGCTTTCAGAGTGACTGACTaGACTGATCATCTCTTGTTCTTTCTCATTCTGCAT +
Preference number: 6 (lower is better)
Translates to: LRDIGPAFRVTD*TDHLLFFLILH
Trigger: ATGCAGAATGAGAAAGAACAAGAGATGATCAGTCCAGTCAGTCACTCTGAAAGCAGGCCCAATGTCCCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344440.7
ENST00000369698.5
ENST00000452214.5
ENST00000473866.1
ENST00000612154.4
CDS CAA 72 bp CACAGACCAGTAGAACCTGTTTGGTACAACCCCTTCTaGGATAAGCTGCCATCTTCTCCCAAATTCAGCAGA +
Preference number: 6 (lower is better)
Translates to: HRPVEPVWYNPF*DKLPSSPKFSR
Trigger: TCTGCTGAATTTGGGAGAAGATGGCAGCTTATCCAAGAAGGGGTTGTACCAAACAGGTTCTACTGGTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000612154.4
ENST00000622431.4
CDS CAA 72 bp GCAGTGTACTGTTCCCTTACGCCATCAGTGCAATTATaGGAAACCACCTTCCTGTACCCAGTACTATTGAGG +
Preference number: 6 (lower is better)
Translates to: AVYCSLTPSVQL*ETTFLYPVLLR
Trigger: CCTCAATAGTACTGGGTACAGGAAGGTGGTTTCCAATAATTGCACTGATGGCGTAAGGGAACAGTACACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS CAA 72 bp GCTCTACTGCCTGGATGTCTGCAAACATTATGCCTCTaGTCCTCAATCTTAGGTTCCAAATCTCCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: ALLPGCLQTLCL*SSILGSKSPEG
Trigger: TCCCTCAGGAGATTTGGAACCTAAGATTGAGGACAAGAGGCATAATGTTTGCAGACATCCAGGCAGTAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CAA 72 bp CTAGCAAGTGAACGTCAGATTCTCTATACCTCGTTGTaGGATTCCCATGCCTACTTCACAGGCAGAGAGAGA +
Preference number: 6 (lower is better)
Translates to: LASERQILYTSL*DSHAYFTGRER
Trigger: TCTCTCTCTGCCTGTGAAGTAGGCATGGGAATCCAACAACGAGGTATAGAGAATCTGACGTTCACTTGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CAA 90 bp ACTGGTGTTCCAGAGCAGTTTGCCCTCCTTAAGAGCTGTATCCAGTaGAGGCTACCATGTTTCATTCTAGTCAATACATACCATGTCCTG +
Preference number: 6 (lower is better)
Translates to: TGVPEQFALLKSCIQ*RLPCFILVNTYHVL
Trigger: CAGGACATGGTATGTATTGACTAGAATGAAACATGGTAGCCTCAACTGGATACAGCTCTTAAGGAGGGCAAACTGCTCTGGAACACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CAA 90 bp TCTCAGGATGCTCTACTGCCTGGATGTCTGCAAACATTATGCCTCTaGTCCTCAATCTTAGGTTCCAAATCTCCTGAGGGAAAGTTCCTA +
Preference number: 6 (lower is better)
Translates to: SQDALLPGCLQTLCL*SSILGSKSPEGKFL
Trigger: TAGGAACTTTCCCTCAGGAGATTTGGAACCTAAGATTGAGGACAAGAGGCATAATGTTTGCAGACATCCAGGCAGTAGAGCATCCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS GCA 72 bp TCTTTGTTCTTTGTGGTGACAAAGGGAAGAGACAGGTaGACGTGCTCCAAGGGACAAGTTACATGTAAGTAC +
Preference number: 6 (lower is better)
Translates to: SLFFVVTKGRDR*TCSKGQVTCKY
Trigger: GTACTTACATGTAACTTGTCCCTTGGAGCACGTGCACCTGTCTCTTCCCTTTGTCACCACAAAGAACAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000486192.1
ENST00000612154.4
ENST00000622431.4
CDS GCA 72 bp CAGGATGCTCTACTGCCTGGATGTCTGCAAACATTATaGCTCTTGTCCTCAATCTTAGGTTCCAAATCTCCT +
Preference number: 6 (lower is better)
Translates to: QDALLPGCLQTL*LLSSILGSKSP
Trigger: AGGAGATTTGGAACCTAAGATTGAGGACAAGAGGCATAATGTTTGCAGACATCCAGGCAGTAGAGCATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS GCA 72 bp CACTGGAAAGGGAAAGGTGTCAGAGACTTTGCAATGTaGTGCGATATCTTCCTGGAGAAGGAGGAATTACTA +
Preference number: 6 (lower is better)
Translates to: HWKGKGVRDFAM*CDIFLEKEELL
Trigger: TAGTAATTCCTCCTTCTCCAGGAAGATATCGCAGCACATTGCAAAGTCTCTGACACCTTTCCCTTTCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS GCA 72 bp TTAATGACACTGGAAAGGGAAAGGTGTCAGAGACTTTaGAATGTGCTGCGATATCTTCCTGGAGAAGGAGGA +
Preference number: 6 (lower is better)
Translates to: LMTLERERCQRL*NVLRYLPGEGG
Trigger: TCCTCCTTCTCCAGGAAGATATCGCAGCACATTGCAAAGTCTCTGACACCTTTCCCTTTCCAGTGTCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CCA 72 bp TTCAGCTCGAAGTGTACTGAGTTTTGGTTGAGCGTGTaGATCAGCAATTCTGATATCTGCTCCAGGTCATCA +
Preference number: 6 (lower is better)
Translates to: FSSKCTEFWLSV*ISNSDICSRSS
Trigger: TGATGACCTGGAGCAGATATCAGAATTGCTGATCCACACGCTCAACCAAAACTCAGTACACTTCGAGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000452214.5
ENST00000473866.1
ENST00000612154.4
ENST00000622431.4
CDS CCA 72 bp ATCTTTTCTAGCAGAACACATCTTAGGTGTCAGTGCTaGCATCTTCATGGAAAGGAACATGGAGCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: IFSSRTHLRCQC*HLHGKEHGAAP
Trigger: TGGAGCAGCTCCATGTTCCTTTCCATGAAGATGCCAGCACTGACACCTAAGATGTGTTCTGCTAGAAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478809.2
CDS CAA 72 bp GGATCAGCAATTCTGATATCTGCTCCAGGTCATCAGTaGACCTTTTGTTTTCTCCAGCTGGATCCTGATAGG +
Preference number: 6 (lower is better)
Translates to: GSAILISAPGHQ*TFCFLQLDPDR
Trigger: CCTATCAGGATCCAGCTGGAGAAAACAAAAGGTCAACTGATGACCTGGAGCAGATATCAGAATTGCTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000452214.5
ENST00000473866.1
ENST00000612154.4
ENST00000622431.4
CDS CAA 72 bp AATCTAGCAAGTGAACGTCAGATTCTCTATACCTCGTaGTTGGATTCCCATGCCTACTTCACAGGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: NLASERQILYTS*LDSHAYFTGRE
Trigger: CTCTCTGCCTGTGAAGTAGGCATGGGAATCCAACAACGAGGTATAGAGAATCTGACGTTCACTTGCTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CAA 72 bp GATGAGATACTTGAGCACCAAGGGAGCTTGTTGTCCTaGAAGCTACAACTGCTTCTACACTCTAGGGTTCAT +
Preference number: 6 (lower is better)
Translates to: DEILEHQGSLLS*KLQLLLHSRVH
Trigger: ATGAACCCTAGAGTGTAGAAGCAGTTGTAGCTTCAAGGACAACAAGCTCCCTTGGTGCTCAAGTATCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486192.1
CDS CAA 90 bp CGTTGTTGGATTCCCATGCCTACTTCACAGGCAGAGAGAGAGCCATaGAAATATGAGAAAGTCCATTTTACAACTTCTGGTAAGGGACAG +
Preference number: 6 (lower is better)
Translates to: RCWIPMPTSQAEREP*KYEKVHFTTSGKGQ
Trigger: CTGTCCCTTACCAGAAGTTGTAAAATGGACTTTCTCATATTTCAATGGCTCTCTCTCTGCCTGTGAAGTAGGCATGGGAATCCAACAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS TCA 72 bp ATGAGATACTTGAGCACCAAGGGAGCTTGTTGTCCTTaGAGCTACAACTGCTTCTACACTCTAGGGTTCATA +
Preference number: 6 (lower is better)
Translates to: MRYLSTKGACCP*SYNCFYTLGFI
Trigger: TATGAACCCTAGAGTGTAGAAGCAGTTGTAGCTTCAAGGACAACAAGCTCCCTTGGTGCTCAAGTATCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486192.1
CDS GCA 72 bp ACTATCTTTTCTAGCAGAACACATCTTAGGTGTCAGTaGTGGCATCTTCATGGAAAGGAACATGGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: TIFSSRTHLRCQ*WHLHGKEHGAA
Trigger: AGCAGCTCCATGTTCCTTTCCATGAAGATGCCAGCACTGACACCTAAGATGTGTTCTGCTAGAAAAGATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478809.2
CDS CAA 72 bp CCAGAGCAGTTTGCCCTCCTTAAGAGCTGTATCCAGTaGAGGCTACCATGTTTCATTCTAGTCAATACATAC +
Preference number: 6 (lower is better)
Translates to: PEQFALLKSCIQ*RLPCFILVNTY
Trigger: GTATGTATTGACTAGAATGAAACATGGTAGCCTCAACTGGATACAGCTCTTAAGGAGGGCAAACTGCTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CAA 72 bp CATAATGATGAGATACTTGAGCACCAAGGGAGCTTGTaGTCCTTGAAGCTACAACTGCTTCTACACTCTAGG +
Preference number: 6 (lower is better)
Translates to: HNDEILEHQGSL*SLKLQLLLHSR
Trigger: CCTAGAGTGTAGAAGCAGTTGTAGCTTCAAGGACAACAAGCTCCCTTGGTGCTCAAGTATCTCATCATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486192.1
CDS CAA 90 bp AGAGAGAGAGAACATAATGATGAGATACTTGAGCACCAAGGGAGCTaGTTGTCCTTGAAGCTACAACTGCTTCTACACTCTAGGGTTCAT +
Preference number: 6 (lower is better)
Translates to: REREHNDEILEHQGS*LSLKLQLLLHSRVH
Trigger: ATGAACCCTAGAGTGTAGAAGCAGTTGTAGCTTCAAGGACAACAAGCTCCCTTGGTGCTCAAGTATCTCATCATTATGTTCTCTCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486192.1
CDS TCA 72 bp TCCAGGTGTTCCCTGCATCTGAAGAGACAAACATGCTaGTGTCAGTGTCTGACAATTCAGAACCTATATTAC +
Preference number: 6 (lower is better)
Translates to: SRCSLHLKRQTC*CQCLTIQNLYY
Trigger: GTAATATAGGTTCTGAATTGTCAGACACTGACATCAGCATGTTTGTCTCTTCAGATGCAGGGAACACCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000612154.4
ENST00000622431.4
CDS CAA 72 bp GAACATAATGATGAGATACTTGAGCACCAAGGGAGCTaGTTGTCCTTGAAGCTACAACTGCTTCTACACTCT +
Preference number: 6 (lower is better)
Translates to: EHNDEILEHQGS*LSLKLQLLLHS
Trigger: AGAGTGTAGAAGCAGTTGTAGCTTCAAGGACAACAAGCTCCCTTGGTGCTCAAGTATCTCATCATTATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486192.1
CDS CAA 90 bp ACTTACTCATTTAATGACACTGGAAAGGGAAAGGTGTCAGAGACTTaGCAATGTGCTGCGATATCTTCCTGGAGAAGGAGGAATTACTAC +
Preference number: 6 (lower is better)
Translates to: TYSFNDTGKGKVSET*QCAAISSWRRRNYY
Trigger: GTAGTAATTCCTCCTTCTCCAGGAAGATATCGCAGCACATTGCAAAGTCTCTGACACCTTTCCCTTTCCAGTGTCATTAAATGAGTAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CAA 90 bp GAACATAATGATGAGATACTTGAGCACCAAGGGAGCTTGTTGTCCTaGAAGCTACAACTGCTTCTACACTCTAGGGTTCATAAGCCATTT +
Preference number: 6 (lower is better)
Translates to: EHNDEILEHQGSLLS*KLQLLLHSRVHKPF
Trigger: AAATGGCTTATGAACCCTAGAGTGTAGAAGCAGTTGTAGCTTCAAGGACAACAAGCTCCCTTGGTGCTCAAGTATCTCATCATTATGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486192.1
CDS GCA 72 bp CAGGGTTCAGATTCCATAGCTCCTGCATATTTTCCTTaGATACACTTCCGCTCTGATTTTCGCTTCTTATAT +
Preference number: 6 (lower is better)
Translates to: QGSDSIAPAYFP*IHFRSDFRFLY
Trigger: ATATAAGAAGCGAAAATCAGAGCGGAAGTGTATGCAAGGAAAATATGCAGGAGCTATGGAATCTGAACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000369698.5
ENST00000472196.1
ENST00000612154.4
ENST00000622431.4
CDS CCA 72 bp GGTCTTGACTGTATGCCAGAATCCAGTCTTCTTGTTTaGGGTGAAAAAGCAAGCTTTGAATGTAGAAGTTCA +
Preference number: 6 (lower is better)
Translates to: GLDCMPESSLLV*GEKASFECRSS
Trigger: TGAACTTCTACATTCAAAGCTTGCTTTTTCACCCCAAACAAGAAGACTGGATTCTGGCATACAGTCAAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000612154.4
ENST00000622431.4
CDS CAA 72 bp ATTCCCATGCCTACTTCACAGGCAGAGAGAGAGCCATaGAAATATGAGAAAGTCCATTTTACAACTTCTGGT +
Preference number: 6 (lower is better)
Translates to: IPMPTSQAEREP*KYEKVHFTTSG
Trigger: ACCAGAAGTTGTAAAATGGACTTTCTCATATTTCAATGGCTCTCTCTCTGCCTGTGAAGTAGGCATGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS TCA 72 bp ATTACCTTGCCTCTCCAAATAAAAGAAAGTGCACTGTaGAAATCGGACACCAGATGTGACTGCAGTTGTTAT +
Preference number: 6 (lower is better)
Translates to: ITLPLQIKESAL*KSDTRCDCSCY
Trigger: ATAACAACTGCAGTCACATCTGGTGTCCGATTTTCACAGTGCACTTTCTTTTATTTGGAGAGGCAAGGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473866.1
CDS CCA 72 bp AACAAACACATAATGATCCTGAACAATCAAAGAGTCTaGGTCAATGTAGCCTGGAAAAGGCTGATTCCTGTT +
Preference number: 6 (lower is better)
Translates to: NKHIMILNNQRV*VNVAWKRLIPV
Trigger: AACAGGAATCAGCCTTTTCCAGGCTACATTGACCCAGACTCTTTGATTGTTCAGGATCATTATGTGTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263054.11
ENST00000344440.7
ENST00000612154.4
ENST00000622431.4
CDS CAA 90 bp GTCCTCCATTCAAACATTTACATAGGTAGGGATTTCTTTTGTGCTTaGATTCTCAGCAACTATGGAAATACTTCCTATGAGCTGGGATTC +
Preference number: 6 (lower is better)
Translates to: VLHSNIYIGRDFFCA*ILSNYGNTSYELGF
Trigger: GAATCCCAGCTCATAGGAAGTATTTCCATAGTTGCTGAGAATCAAAGCACAAAAGAAATCCCTACCTATGTAAATGTTTGAATGGAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452214.5
CDS CAA 72 bp ACAGAGAAATGGATCAGCAATAGTGGCTTCATAGGTTaGTCTAGCTTCCTGGAAAATTTCTGCTGCAATAAA +
Preference number: 6 (lower is better)
Translates to: TEKWISNSGFIG*SSFLENFCCNK
Trigger: TTTATTGCAGCAGAAATTTTCCAGGAAGCTAGACAAACCTATGAAGCCACTATTGCTGATCCATTTCTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473866.1