RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SORBS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000095637

Ensembl transcript IDs: ENST00000277982.9, ENST00000306402.10, ENST00000354106.7, ENST00000361941.7, ENST00000371227.8, ENST00000371228.2, ENST00000371239.5, ENST00000371241.5, ENST00000371245.7, ENST00000371246.6, ENST00000371247.6, ENST00000371247.7, ENST00000371249.6, ENST00000465489.1, ENST00000472854.5, ENST00000474353.6, ENST00000482068.1, ENST00000486141.3, ENST00000492542.1, ENST00000607232.5, ENST00000634504.1, ENST00000647619.1, ENST00000649575.1, ENST00000649911.1

Found 1443 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGACCAAGCAGCCCGGGCGTCACAGGGGCCTCTCTCTTCTGATCTaGCCCCCACAAAGAACAGACGTCCTGGTTGCTGCTGGTAGTGGC +
Preference number: 1 (lower is better)
Translates to: VTKQPGRHRGLSLLI*PPQRTDVLVAAGSG
Trigger: GCCACTACCAGCAGCAACCAGGACGTCTGTTCTTTGTGGGGGCCAGATCAGAAGAGAGAGGCCCCTGTGACGCCCGGGCTGCTTGGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR GCA 90 bp AGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGAATGCATCAGGTaGCTCAGTTTTGCCTCTGTTTCCCCATCCACACCTCAGCAGGTT +
Preference number: 1 (lower is better)
Translates to: RAVNGTAAQQAECIR*LSFASVSPSTPQQV
Trigger: AACCTGCTGAGGTGTGGATGGGGAAACAGAGGCAAAACTGAGGCACCTGATGCATTCAGCCTGCTGTGCAGCAGTGCCATTGACTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR TCA 90 bp CTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTaGATGCATCAGGTGCCTCAGTTTTGCCTCTGTTTCCCCATCCAC +
Preference number: 1 (lower is better)
Translates to: LSEHQGSQWHCCTAG*MHQVPQFCLCFPIH
Trigger: GTGGATGGGGAAACAGAGGCAAAACTGAGGCACCTGATGCATTCAGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR GCA 90 bp CTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGAATaGATCAGGTGCCTCAGTTTTGCCTCTGTTTCCCCATCCACACCT +
Preference number: 1 (lower is better)
Translates to: LNIRAVNGTAAQQAE*IRCLSFASVSPSTP
Trigger: AGGTGTGGATGGGGAAACAGAGGCAAAACTGAGGCACCTGATGCATTCAGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR CCA 90 bp GCGTTACAGGATCAGCTGGCTCCAGGGGAGCTGAGAAATGTAGGCTaGGGGTCTTGTTGCATTCTTGGGCTTGAAGCCTTCAGGCTCAAT +
Preference number: 1 (lower is better)
Translates to: ALQDQLAPGELRNVG*GSCCILGLEAFRLN
Trigger: ATTGAGCCTGAAGGCTTCAAGCCCAAGAATGCAACAAGACCCCCAGCCTACATTTCTCAGCTCCCCTGGAGCCAGCTGATCCTGTAACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR TCA 90 bp GACGTCCTGGTTGCTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTaGAGAGAAGCCTTGCCAGGGTGTACTCAGATTCACAACCCTGGT +
Preference number: 1 (lower is better)
Translates to: DVLVAAGSGRIAASV*REALPGCTQIHNPG
Trigger: ACCAGGGTTGTGAATCTGAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAGCAACCAGGACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR TCA 90 bp TCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTCTCTCTaGACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGAAT +
Preference number: 1 (lower is better)
Translates to: SAPQFSWANLVCVSL*TSGQSMALLHSRLN
Trigger: ATTCAGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR TCA 90 bp TGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGATAAACATCCTTaGATTGGACAGAGTTGTGACCAAGCAGCCCGGGCGTCACAGGGG +
Preference number: 1 (lower is better)
Translates to: CICLTQDLREADKHP*IGQSCDQAARASQG
Trigger: CCCCTGTGACGCCCGGGCTGCTTGGTCACAACTCTGTCCAATTCAAGGATGTTTATCGGCCTCTCTTAGATCCTGAGTGAGACAAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR CCA 90 bp CTGTGGCTGTCTGGTGGGGGATGGGAAGCTGATGGGATCCTAAGATaGGTATTTGTGACAGCAGCTGAGGCACAGGCATTGAAAACAAAT +
Preference number: 1 (lower is better)
Translates to: LWLSGGGWEADGILR*VFVTAAEAQALKTN
Trigger: ATTTGTTTTCAATGCCTGTGCCTCAGCTGCTGTCACAAATACCCATCTTAGGATCCCATCAGCTTCCCATCCCCCACCAGACAGCCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR CCA 90 bp AACAATAGGGAGAAAGTGAGGGTACTGTGGCTGTCTGGTGGGGGATaGGAAGCTGATGGGATCCTAAGATGGGTATTTGTGACAGCAGCT +
Preference number: 1 (lower is better)
Translates to: NNREKVRVLWLSGGG*EADGILRWVFVTAA
Trigger: AGCTGCTGTCACAAATACCCATCTTAGGATCCCATCAGCTTCCCATCCCCCACCAGACAGCCACAGTACCCTCACTTTCTCCCTATTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR GCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTaGCAGGGTGTACTCAGATTCACAACCCTGGTTACTACCGTTTGT +
Preference number: 1 (lower is better)
Translates to: LLVVAELLLQSEEKP*QGVLRFTTLVTTVC
Trigger: ACAAACGGTAGTAACCAGGGTTGTGAATCTGAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR TCA 90 bp GTTTCTTTCCTGAGAACAGGATTTGAAAGAACAATAGGGAGAAAGTaGGGGTACTGTGGCTGTCTGGTGGGGGATGGGAAGCTGATGGGA +
Preference number: 1 (lower is better)
Translates to: VSFLRTGFERTIGRK*GYCGCLVGDGKLMG
Trigger: TCCCATCAGCTTCCCATCCCCCACCAGACAGCCACAGTACCCTCACTTTCTCCCTATTGTTCTTTCAAATCCTGTTCTCAGGAAAGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR CCA 90 bp TTCATTTTCCTGTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTaGGCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCT +
Preference number: 1 (lower is better)
Translates to: FIFLCQSPQSPLSFW*AGNGSFLYLSHSGS
Trigger: AGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACACAGGAAAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR GCA 90 bp ACCAGGAAACACATTAGCCAATACAGTCCACAATCGGTGAAATGCTaGCGTGCAAATTGCACGTGCATATGCATTTTTACTATATTCCCT +
Preference number: 1 (lower is better)
Translates to: TRKHISQYSPQSVKC*RANCTCICIFTIFP
Trigger: AGGGAATATAGTAAAAATGCATATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCTAATGTGTTTCCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR GCA 90 bp AAGACCAGGAAACACATTAGCCAATACAGTCCACAATCGGTGAAATaGTGCCGTGCAAATTGCACGTGCATATGCATTTTTACTATATTC +
Preference number: 1 (lower is better)
Translates to: KTRKHISQYSPQSVK*CRANCTCICIFTIF
Trigger: GAATATAGTAAAAATGCATATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCTAATGTGTTTCCTGGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR TCA 90 bp CAAATTGGTGAGGCATACCTGAATTTCTGGAGATATACAAATGCGTaGGGCTGGCATCATATGCAAATGTGGCTTTACAAATTGGTTTTA +
Preference number: 1 (lower is better)
Translates to: QIGEAYLNFWRYTNA*GWHHMQMWLYKLVL
Trigger: TAAAACCAATTTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAGAAATTCAGGTATGCCTCACCAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTGGGGAGGGGAAAGGCTaGAGTGGCTCCCAGAAGCGG +
Preference number: 2 (lower is better)
Translates to: VSVSPITSEFLVGREWVIGEGKG*SGSQKR
Trigger: CCGCTTCTGGGAGCCACTTCAGCCTTTCCCCTCCCC...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCGGGGAGGGGAAAGGCTaGAGTGGCTCCCAGAAGCGG +
Preference number: 2 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLGEGKG*SGSQKR
Trigger: CCGCTTCTGGGAGCCACTTCAGCCTTTCCCCTCCCC...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTaGAGTGGCTCCCAGAAGCGG +
Preference number: 2 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGGEGKG*SGSQKR
Trigger: CCGCTTCTGGGAGCCACTTCAGCCTTTCCCCTCCCC...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
3UTR CAA 90 bp ATGGCACTGCTGCACAGCAGGCTGAATGCATCAGGTGCCTCAGTTTaGCCTCTGTTTCCCCATCCACACCTCAGCAGGTTGAGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: MALLHSRLNASGASV*PLFPHPHLSRLSEG
Trigger: TCCCTCACTCAACCTGCTGAGGTGTGGATGGGGAAACAGAGGCAAAACTGAGGCACCTGATGCATTCAGCCTGCTGTGCAGCAGTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGGCTGGGGGTCTTGTTaGATTCTTGGGCTTGAAGCC +
Preference number: 2 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAGWGSC*ILGLEA
Trigger: GGCTTCAAGCCCAAGAATGCAACAAGACCCCCAGCC...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGGGGAAAGGCTGAAGTaGCTCCCAGAAGCGGCTAAG +
Preference number: 2 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGGERLK*LPEAAK
Trigger: CTTAGCCGCTTCTGGGAGCCACTTCAGCCTTTCCCC...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTCATCAGGGCAGTCAATaGCACTGCTGCACAGCAGGC +
Preference number: 2 (lower is better)
Translates to: VSVSPITSEFLVGREWVIHQGSQ*HCCTAG
Trigger: GCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATG...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTAGAATGAACCACAAGTaGCCTCCAGAGCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: VSVSPITSEFLVGREWVIRMNHK*PPEPQG
Trigger: GCCCTGTGGCTCTGGAGGCCACTTGTGGTTCATTCT...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR CAA 90 bp CCCCACAAAGAACAGACGTCCTGGTTGCTGCTGGTAGTGGCAGAATaGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCAGA +
Preference number: 2 (lower is better)
Translates to: PHKEQTSWLLLVVAE*LLQSEEKPCQGVLR
Trigger: TCTGAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAGCAACCAGGACGTCTGTTCTTTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCCTTGGTAGCTCAGACTaGCCTCCAGCAGCGTTACAG +
Preference number: 2 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLLGSSD*PPAALQ
Trigger: CTGTAACGCTGCTGGAGGTCAGTCTGAGCTACCAAG...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAAATTGGACAGAGTTGTaGCCAAGCAGCCCGGGCGTC +
Preference number: 2 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLNWTEL*PSSPGV
Trigger: GACGCCCGGGCTGCTTGGTCACAACTCTGTCCAATT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGGAAAGGCTGAAGTaGCTCCCAGAAGCGGCTAAG +
Preference number: 2 (lower is better)
Translates to: WLTLLLDYASGQITQEVEGERLK*LPEAAK
Trigger: CTTAGCCGCTTCTGGGAGCCACTTCAGCCTTTCCCC...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
3UTR-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTAGCCACGGCAAACCCTaGGCATGTCTTGCTTATGGT +
Preference number: 2 (lower is better)
Translates to: VSVSPITSEFLVGREWVISHGKP*ACLAYG
Trigger: ACCATAAGCAAGACATGCCCAGGGTTTGCCGTGGCT...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR CAA 90 bp ACCTATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTaGTGTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGC +
Preference number: 2 (lower is better)
Translates to: TYLLGHLLPNSHGQT*CAFLSEHQGSQWHC
Trigger: GCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTAGCCTTCAGGCTCAATaGTTGAGATGGGAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: VSVSPITSEFLVGREWVISLQAQ*LRWELS
Trigger: AGAGAGCTCCCATCTCAATCATTGAGCCTGAAGGCT...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCTTGGTAGCTCAGACTaGCCTCCAGCAGCGTTACAG +
Preference number: 2 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLLGSSD*PPAALQ
Trigger: CTGTAACGCTGCTGGAGGTCAGTCTGAGCTACCAAG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCTTGGTAGCTCAGACTaGCCTCCAGCAGCGTTACAG +
Preference number: 2 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATLGSSD*PPAALQ
Trigger: CTGTAACGCTGCTGGAGGTCAGTCTGAGCTACCAAG...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCCTCAGCAGGTTGAGTaGGGGATTTGGTCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLPQQVE*GIWSWA
Trigger: TGCCCAAGACCAAATCCCTCACTCAACCTGCTGAGG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAGGGGCCTCTCTCTTCTaGTCTGGCCCCCACAAAGAA +
Preference number: 2 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRGASLF*SGPHKE
Trigger: TTCTTTGTGGGGGCCAGATCAGAAGAGAGAGGCCCC...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTTGGGGGATGGGAAGCTaGTGGGATCCTAAGATGGGT +
Preference number: 2 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLWGMGS*WDPKMG
Trigger: ACCCATCTTAGGATCCCATCAGCTTCCCATCCCCCA...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTTCTGCTCCTGGACTATaGTTCAGGTCAGATTACCCA +
Preference number: 2 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQASAPGL*FRSDYP
Trigger: TGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGA...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTTGGTCTTGGGCAGTGTaGGGGACTCCACCTTTGTCT +
Preference number: 2 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATWSWAV*GTPPLS
Trigger: AGACAAAGGTGGAGTCCCCCACACTGCCCAAGACCA...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAAGAATGAACCACAAGTaGCCTCCAGAGCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLRMNHK*PPEPQG
Trigger: GCCCTGTGGCTCTGGAGGCCACTTGTGGTTCATTCT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTAAAGAACAGACGTCCTaGTTGCTGCTGGTAGTGGCA +
Preference number: 2 (lower is better)
Translates to: VSVSPITSEFLVGREWVIKEQTS*LLLVVA
Trigger: TGCCACTACCAGCAGCAACCAGGACGTCTGTTCTTT...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTAAAGTGAGGGTACTGTaGCTGTCTGGTGGGGGATGG +
Preference number: 2 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLKVRVL*LSGGGW
Trigger: CCATCCCCCACCAGACAGCCACAGTACCCTCACTTT...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTTTCAGGCTCAATGATTaGGATGGGAGCTCTCTAAGG +
Preference number: 2 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGFRLND*DGSSLR
Trigger: CCTTAGAGAGCTCCCATCTCAATCATTGAGCCTGAA...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTTTCAGGCTCAATGATTaGGATGGGAGCTCTCTAAGG +
Preference number: 2 (lower is better)
Translates to: VSVSPITSEFLVGREWVIFRLND*DGSSLR
Trigger: CCTTAGAGAGCTCCCATCTCAATCATTGAGCCTGAA...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCAGCCACAGGGCTTCCTaGCTTCATCACTCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLSHRAS*LHHSEN
Trigger: GTTTTCTGAGTGATGAAGTCAGGAAGCCCTGTGGCT...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGATATGGGAAAAGAATaGACCACAAGTGGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGDMGKE*TTSGLQ
Trigger: CTGGAGGCCACTTGTGGTTCATTCTTTTCCCATATC...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTTCTGCTCCTGGACTATaGTTCAGGTCAGATTACCCA +
Preference number: 2 (lower is better)
Translates to: VSVSPITSEFLVGREWVISAPGL*FRSDYP
Trigger: TGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGA...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAGGCTGGGGGTCTTGTTaGATTCTTGGGCTTGAAGCC +
Preference number: 2 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRGWGSC*ILGLEA
Trigger: GGCTTCAAGCCCAAGAATGCAACAAGACCCCCAGCC...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGCTGAATGCATCAGGTaGCTCAGTTTTGCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGAECIR*LSFASV
Trigger: AACAGAGGCAAAACTGAGGCACCTGATGCATTCAGC...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTATCTGCTTGGCCATCTaGTCCCCAATTCTCATGGGC +
Preference number: 2 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATICLAI*SPILMG
Trigger: GCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGAT...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAATCTGCTTGGCCATCTaGTCCCCAATTCTCATGGGC +
Preference number: 2 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLICLAI*SPILMG
Trigger: GCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGAT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATGGGGAAAGGCTGAAGTaGCTCCCAGAAGCGGCTAAG +
Preference number: 2 (lower is better)
Translates to: TTLVTTVCVILELLQGVDGERLK*LPEAAK
Trigger: CTTAGCCGCTTCTGGGAGCCACTTCAGCCTTTCCCC...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATCATCAGGGCAGTCAATaGCACTGCTGCACAGCAGGC +
Preference number: 2 (lower is better)
Translates to: TTLVTTVCVILELLQGVDHQGSQ*HCCTAG
Trigger: GCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATG...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAAGAATGAACCACAAGTaGCCTCCAGAGCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRRMNHK*PPEPQG
Trigger: GCCCTGTGGCTCTGGAGGCCACTTGTGGTTCATTCT...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTAGCCACGGCAAACCCTaGGCATGTCTTGCTTATGGT +
Preference number: 2 (lower is better)
Translates to: RQPGVPYTTLPPRIATPISHGKP*ACLAYG
Trigger: ACCATAAGCAAGACATGCCCAGGGTTTGCCGTGGCT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR CAA 90 bp TATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATaGCTACTCCTATTTGTGAGCTTGGATGTGTATCTGTGGGGGAAG +
Preference number: 2 (lower is better)
Translates to: YADSQGFRTQPYHLE*LLLFVSLDVYLWGK
Trigger: CTTCCCCCACAGATACACATCCAAGCTCACAAATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTAGCCTTCAGGCTCAATaGTTGAGATGGGAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATSLQAQ*LRWELS
Trigger: AGAGAGCTCCCATCTCAATCATTGAGCCTGAAGGCT...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGTGTGCGTTTCTCTCTaGACATCAGGGCAGTCAATG +
Preference number: 2 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATVCVSL*TSGQSM
Trigger: CATTGACTGCCCTGATGTTCAGAGAGAAACGCACAC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTAGCCACAGGGCTTCCTaGCTTCATCACTCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLSHRAS*LHHSEN
Trigger: GTTTTCTGAGTGATGAAGTCAGGAAGCCCTGTGGCT...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTAGCCACAGGGCTTCCTaGCTTCATCACTCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: RQPGVPYTTLPPRIATPISHRAS*LHHSEN
Trigger: GTTTTCTGAGTGATGAAGTCAGGAAGCCCTGTGGCT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCCTCCCCAATCACCTCTaGGTTTCTGGTGGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLLPNHL*VSGGQG
Trigger: TCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAG...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCTCTGCTCCTGGACTATaGTTCAGGTCAGATTACCCA +
Preference number: 2 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLSAPGL*FRSDYP
Trigger: TGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGA...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCGCTGAATGCATCAGGTaGCTCAGTTTTGCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLAECIR*LSFASV
Trigger: AACAGAGGCAAAACTGAGGCACCTGATGCATTCAGC...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTGCACAGCAGGCTGAATaGATCAGGTGCCTCAGTTTT +
Preference number: 2 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIAQQAE*IRCLSF
Trigger: AAAACTGAGGCACCTGATGCATTCAGCCTGCTGTGC...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAGGGGAAAGGCTGAAGTaGCTCCCAGAAGCGGCTAAG +
Preference number: 2 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEGERLK*LPEAAK
Trigger: CTTAGCCGCTTCTGGGAGCCACTTCAGCCTTTCCCC...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCTCTCTCTTCTGATCTaGCCCCCACAAAGAACAGAC +
Preference number: 2 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATLSLLI*PPQRTD
Trigger: GTCTGTTCTTTGTGGGGGCCAGATCAGAAGAGAGAG...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCCTCTGAGTTTCTGGTaGGCAGGGAATGGGTCATTT +
Preference number: 2 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLPLSFW*AGNGSF
Trigger: AAATGACCCATTCCCTGCCCACCAGAAACTCAGAGG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTCCTCTGAGTTTCTGGTaGGCAGGGAATGGGTCATTT +
Preference number: 2 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIPLSFW*AGNGSF
Trigger: AAATGACCCATTCCCTGCCCACCAGAAACTCAGAGG...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTTTCAGGCTCAATGATTaGGATGGGAGCTCTCTAAGG +
Preference number: 2 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIFRLND*DGSSLR
Trigger: CCTTAGAGAGCTCCCATCTCAATCATTGAGCCTGAA...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTTTCAGGCTCAATGATTaGGATGGGAGCTCTCTAAGG +
Preference number: 2 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATFRLND*DGSSLR
Trigger: CCTTAGAGAGCTCCCATCTCAATCATTGAGCCTGAA...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAACCTCAGCAGGTTGAGTaGGGGATTTGGTCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEPQQVE*GIWSWA
Trigger: TGCCCAAGACCAAATCCCTCACTCAACCTGCTGAGG...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGATATGGGAAAAGAATaGACCACAAGTGGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATDMGKE*TTSGLQ
Trigger: CTGGAGGCCACTTGTGGTTCATTCTTTTCCCATATC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTATTTGTGACAGCAGCTaGGGCACAGGCATTGAAAAC +
Preference number: 2 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLICDSS*GTGIEN
Trigger: GTTTTCAATGCCTGTGCCTCAGCTGCTGTCACAAAT...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAAGACGGGCAAATTGGTaGGGCATACCTGAATTTCTG +
Preference number: 2 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLRRANW*GIPEFL
Trigger: CAGAAATTCAGGTATGCCTCACCAATTTGCCCGTCT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTTCTGCTCCTGGACTATaGTTCAGGTCAGATTACCCA +
Preference number: 2 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLSAPGL*FRSDYP
Trigger: TGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGA...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGCTGAATGCATCAGGTaGCTCAGTTTTGCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATAECIR*LSFASV
Trigger: AACAGAGGCAAAACTGAGGCACCTGATGCATTCAGC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAGCTGAATGCATCAGGTaGCTCAGTTTTGCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLAECIR*LSFASV
Trigger: AACAGAGGCAAAACTGAGGCACCTGATGCATTCAGC...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTTCTGAAGAGAAGCCTTaGCAGGGTGTACTCAGATTC +
Preference number: 2 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATSEEKP*QGVLRF
Trigger: GAATCTGAGTACACCCTGGCAAGGCTTCTCTTCAGA...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAATGTGTTGCAAGGCATaGCGCCAGTTAGTTGCACTT +
Preference number: 2 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLMCCKA*RQLVAL
Trigger: AAGTGCAACTAACTGGCGGCATGCCTTGCAACACAT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCGGGGAAAGGCTGAAGTaGCTCCCAGAAGCGGCTAAG +
Preference number: 2 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSGERLK*LPEAAK
Trigger: CTTAGCCGCTTCTGGGAGCCACTTCAGCCTTTCCCC...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAAGAATGAACCACAAGTaGCCTCCAGAGCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: PLGLRPCSVILKNKCLWERMNHK*PPEPQG
Trigger: GCCCTGTGGCTCTGGAGGCCACTTGTGGTTCATTCT...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAAAAAGATCGGTTCATaGATGATGCTTCCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: DYASGQITQEVEGRGKAEKKIGS*MMLPPP
Trigger: TGGAGGAGGAAGCATCATTCATGAACCGATCTTTTT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
3UTR-3UTR TCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGATTCAGGCTCAATGATTaGGATGGGAGCTCTCTAAGG +
Preference number: 2 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRFRLND*DGSSLR
Trigger: CCTTAGAGAGCTCCCATCTCAATCATTGAGCCTGAA...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATAGCCTTCAGGCTCAATaGTTGAGATGGGAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: TTLVTTVCVILELLQGVDSLQAQ*LRWELS
Trigger: AGAGAGCTCCCATCTCAATCATTGAGCCTGAAGGCT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCCTTGGTAGCTCAGACTaGCCTCCAGCAGCGTTACAG +
Preference number: 2 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSLGSSD*PPAALQ
Trigger: CTGTAACGCTGCTGGAGGTCAGTCTGAGCTACCAAG...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACTTGGTAGCTCAGACTaGCCTCCAGCAGCGTTACAG +
Preference number: 2 (lower is better)
Translates to: LEIYKCVRLASYANVALQLGSSD*PPAALQ
Trigger: CTGTAACGCTGCTGGAGGTCAGTCTGAGCTACCAAG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTTTACTACCGTTTGTGTaGTCCTTGAACTCCTACAGG +
Preference number: 2 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATLLPFV*SLNSYR
Trigger: CCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAA...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTTTACTACCGTTTGTGTaGTCCTTGAACTCCTACAGG +
Preference number: 2 (lower is better)
Translates to: RQPGVPYTTLPPRIATPILLPFV*SLNSYR
Trigger: CCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAA...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAAATTGGACAGAGTTGTaGCCAAGCAGCCCGGGCGTC +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDANWTEL*PSSPGV
Trigger: GACGCCCGGGCTGCTTGGTCACAACTCTGTCCAATT...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCACTCCCCAATCACCTCTaGGTTTCTGGTGGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDALPNHL*VSGGQG
Trigger: TCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAG...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAATCTGTGGGGGAAGATaGGAGTTTAGAGACTCTGGA +
Preference number: 2 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIICGGR*EFRDSG
Trigger: TCCAGAGTCTCTAAACTCTCATCTTCCCCCACAGAT...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAATGGGGGATGGGAAGCTaGTGGGATCCTAAGATGGGT +
Preference number: 2 (lower is better)
Translates to: LEIYKCVRLASYANVALQWGMGS*WDPKMG
Trigger: ACCCATCTTAGGATCCCATCAGCTTCCCATCCCCCA...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATGCACAGCAGGCTGAATaGATCAGGTGCCTCAGTTTT +
Preference number: 2 (lower is better)
Translates to: TTLVTTVCVILELLQGVDAQQAE*IRCLSF
Trigger: AAAACTGAGGCACCTGATGCATTCAGCCTGCTGTGC...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCATCTGCTTGGCCATCTaGTCCCCAATTCTCATGGGC +
Preference number: 2 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLICLAI*SPILMG
Trigger: GCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGAT...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCACATCAGGGCAGTCAATaGCACTGCTGCACAGCAGGC +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAHQGSQ*HCCTAG
Trigger: GCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATG...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAAGCCACGGCAAACCCTaGGCATGTCTTGCTTATGGT +
Preference number: 2 (lower is better)
Translates to: PLGLRPCSVILKNKCLWESHGKP*ACLAYG
Trigger: ACCATAAGCAAGACATGCCCAGGGTTTGCCGTGGCT...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTAAAGACTCTAGACTTTaGGACAATGGTCCTGGGGTA +
Preference number: 2 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLKDSRL*DNGPGV
Trigger: TACCCCAGGACCATTGTCCCAAAGTCTAGAGTCTTT...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAAGTGCTCTTAGATGGTaGAGCAGACCTTCCAAAACA +
Preference number: 2 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLSALRW*SRPSKT
Trigger: TGTTTTGGAAGGTCTGCTCCACCATCTAAGAGCACT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTAAAAAGATCGGTTCATaGATGATGCTTCCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIKKIGS*MMLPPP
Trigger: TGGAGGAGGAAGCATCATTCATGAACCGATCTTTTT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGAAAAAGATCGGTTCATaGATGATGCTTCCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: WLTLLLDYASGQITQEVEKKIGS*MMLPPP
Trigger: TGGAGGAGGAAGCATCATTCATGAACCGATCTTTTT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
3UTR-3UTR TCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCACCTCAGCAGGTTGAGTaGGGGATTTGGTCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAPQQVE*GIWSWA
Trigger: TGCCCAAGACCAAATCCCTCACTCAACCTGCTGAGG...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCGTGTGCGTTTCTCTCTaGACATCAGGGCAGTCAATG +
Preference number: 2 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLVCVSL*TSGQSM
Trigger: CATTGACTGCCCTGATGTTCAGAGAGAAACGCACAC...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAGTGTGCGTTTCTCTCTaGACATCAGGGCAGTCAATG +
Preference number: 2 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEVCVSL*TSGQSM
Trigger: CATTGACTGCCCTGATGTTCAGAGAGAAACGCACAC...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCAGCCACAGGGCTTCCTaGCTTCATCACTCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLSHRAS*LHHSEN
Trigger: GTTTTCTGAGTGATGAAGTCAGGAAGCCCTGTGGCT...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGCCGATAAACATCCTTaGATTGGACAGAGTTGTGAC +
Preference number: 2 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIADKHP*IGQSCD
Trigger: GTCACAACTCTGTCCAATTCAAGGATGTTTATCGGC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAAAGTATTTCCAGCTATaGACTACCCTCAGACAAAGG +
Preference number: 2 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLKYFQL*TTLRQR
Trigger: CCTTTGTCTGAGGGTAGTTCATAGCTGGAAATACTT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATACTGAGGCACAGGCATTaGAAACAAATTTTGCCTACC +
Preference number: 2 (lower is better)
Translates to: SQYSPQSVKCCRANCTCILRHRH*KQILPT
Trigger: GGTAGGCAAAATTTGTTTTCAATGCCTGTGCCTCAG...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAACAATAGGGAGAAAGTaGGGGTACTGTGGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: PLGLRPCSVILKNKCLWETIGRK*GYCGCL
Trigger: CAGACAGCCACAGTACCCTCACTTTCTCCCTATTGT...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATCTGTCCCTGTCTTTTaGTTCTTACTTTATCCACTG +
Preference number: 2 (lower is better)
Translates to: DYASGQITQEVEGRGKAESVPVF*FLLYPL
Trigger: CAGTGGATAAAGTAAGAAGCAAAAGACAGGGACAGA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
3UTR-3UTR GCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAGGCTGGGGGTCTTGTTaGATTCTTGGGCTTGAAGCC +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAGWGSC*ILGLEA
Trigger: GGCTTCAAGCCCAAGAATGCAACAAGACCCCCAGCC...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATGGGGAAAGGCTGAAGTaGCTCCCAGAAGCGGCTAAG +
Preference number: 2 (lower is better)
Translates to: YIKMCCKACRQLVALAINGERLK*LPEAAK
Trigger: CTTAGCCGCTTCTGGGAGCCACTTCAGCCTTTCCCC...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCATGGTCTTGGGCAGTGTaGGGGACTCCACCTTTGTCT +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAWSWAV*GTPPLS
Trigger: AGACAAAGGTGGAGTCCCCCACACTGCCCAAGACCA...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGATGGGATCCTAAGATaGGTATTTGTGACAGCAGCT +
Preference number: 2 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIDGILR*VFVTAA
Trigger: AGCTGCTGTCACAAATACCCATCTTAGGATCCCATC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCAGCCTTCAGGCTCAATaGTTGAGATGGGAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSSLQAQ*LRWELS
Trigger: AGAGAGCTCCCATCTCAATCATTGAGCCTGAAGGCT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATCTTGGTAGCTCAGACTaGCCTCCAGCAGCGTTACAG +
Preference number: 2 (lower is better)
Translates to: YIKMCCKACRQLVALAINLGSSD*PPAALQ
Trigger: CTGTAACGCTGCTGGAGGTCAGTCTGAGCTACCAAG...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAGTGTGCGTTTCTCTCTaGACATCAGGGCAGTCAATG +
Preference number: 2 (lower is better)
Translates to: LEIYKCVRLASYANVALQVCVSL*TSGQSM
Trigger: CATTGACTGCCCTGATGTTCAGAGAGAAACGCACAC...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCAGCCACAGGGCTTCCTaGCTTCATCACTCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSSHRAS*LHHSEN
Trigger: GTTTTCTGAGTGATGAAGTCAGGAAGCCCTGTGGCT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAACGTTTGTGTGATCCTTaGACTCCTACAGGGAGTAGA +
Preference number: 2 (lower is better)
Translates to: PLGLRPCSVILKNKCLWERLCDP*TPTGSR
Trigger: TCTACTCCCTGTAGGAGTTCAAGGATCACACAAACG...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATATGCTACTCCTATTTGTaGGCTTGGATGTGTATCTGT +
Preference number: 2 (lower is better)
Translates to: SQYSPQSVKCCRANCTCICYSYL*AWMCIC
Trigger: ACAGATACACATCCAAGCTCACAAATAGGAGTAGCA...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCGCTGAATGCATCAGGTaGCTCAGTTTTGCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLAECIR*LSFASV
Trigger: AACAGAGGCAAAACTGAGGCACCTGATGCATTCAGC...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCTCTGAAGAGAAGCCTTaGCAGGGTGTACTCAGATTC +
Preference number: 2 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLSEEKP*QGVLRF
Trigger: GAATCTGAGTACACCCTGGCAAGGCTTCTCTTCAGA...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACAATCGGTGAAATGCTaGCGTGCAAATTGCACGTGC +
Preference number: 2 (lower is better)
Translates to: LEIYKCVRLASYANVALQQSVKC*RANCTC
Trigger: GCACGTGCAATTTGCACGGCAGCATTTCACCGATTG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAACCTTAGACAGGCTTaGGTTTTAAACACAACACTT +
Preference number: 2 (lower is better)
Translates to: DYASGQITQEVEGRGKAENLRQA*VLNTTL
Trigger: AAGTGTTGTGTTTAAAACCCAAGCCTGTCTAAGGTT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
3UTR-3UTR CCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACTCTCTCTTCTGATCTaGCCCCCACAAAGAACAGAC +
Preference number: 2 (lower is better)
Translates to: LEIYKCVRLASYANVALQLSLLI*PPQRTD
Trigger: GTCTGTTCTTTGTGGGGGCCAGATCAGAAGAGAGAG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTATTGGGACAATGGTCCTaGGGTAATTCTGAGATATAT +
Preference number: 2 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLLGQWS*GNSEIY
Trigger: ATATATCTCAGAATTACCCCAGGACCATTGTCCCAA...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATAAAGTGAGGGTACTGTaGCTGTCTGGTGGGGGATGG +
Preference number: 2 (lower is better)
Translates to: YIKMCCKACRQLVALAINKVRVL*LSGGGW
Trigger: CCATCCCCCACCAGACAGCCACAGTACCCTCACTTT...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAAGCCTTCAGGCTCAATaGTTGAGATGGGAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDASLQAQ*LRWELS
Trigger: AGAGAGCTCCCATCTCAATCATTGAGCCTGAAGGCT...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACGTTTGTGTGATCCTTaGACTCCTACAGGGAGTAGA +
Preference number: 2 (lower is better)
Translates to: LEIYKCVRLASYANVALQRLCDP*TPTGSR
Trigger: TCTACTCCCTGTAGGAGTTCAAGGATCACACAAACG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCTTACTACCGTTTGTGTaGTCCTTGAACTCCTACAGG +
Preference number: 2 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLLLPFV*SLNSYR
Trigger: CCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAA...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAGCCGATAAACATCCTTaGATTGGACAGAGTTGTGAC +
Preference number: 2 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEADKHP*IGQSCD
Trigger: GTCACAACTCTGTCCAATTCAAGGATGTTTATCGGC...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAACAATAGGGAGAAAGTaGGGGTACTGTGGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDATIGRK*GYCGCL
Trigger: CAGACAGCCACAGTACCCTCACTTTCTCCCTATTGT...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAACAGTCCACAATCGGTaGAATGCTGCCGTGCAAATT +
Preference number: 2 (lower is better)
Translates to: LEIYKCVRLASYANVALQTVHNR*NAAVQI
Trigger: AATTTGCACGGCAGCATTTCACCGATTGTGGACTGT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGATCTGTCCCTGTCTTTTaGTTCTTACTTTATCCACTG +
Preference number: 2 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRSVPVF*FLLYPL
Trigger: CAGTGGATAAAGTAAGAAGCAAAAGACAGGGACAGA...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCTCTGCTCCTGGACTATaGTTCAGGTCAGATTACCCA +
Preference number: 2 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSSAPGL*FRSDYP
Trigger: TGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGA...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAATCTGAAGAGAAGCCTTaGCAGGGTGTACTCAGATTC +
Preference number: 2 (lower is better)
Translates to: LEIYKCVRLASYANVALQSEEKP*QGVLRF
Trigger: GAATCTGAGTACACCCTGGCAAGGCTTCTCTTCAGA...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCACAATCGGTGAAATGCTaGCGTGCAAATTGCACGTGC +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAQSVKC*RANCTC
Trigger: GCACGTGCAATTTGCACGGCAGCATTTCACCGATTG...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCACCACAATCGGTGAAATaGTGCCGTGCAAATTGCACG +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAPQSVK*CRANCT
Trigger: CGTGCAATTTGCACGGCAGCATTTCACCGATTGTGG...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTAACCTTAGACAGGCTTaGGTTTTAAACACAACACTT +
Preference number: 2 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFNLRQA*VLNTTL
Trigger: AAGTGTTGTGTTTAAAACCCAAGCCTGTCTAAGGTT...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTAACCTTAGACAGGCTTaGGTTTTAAACACAACACTT +
Preference number: 2 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATNLRQA*VLNTTL
Trigger: AAGTGTTGTGTTTAAAACCCAAGCCTGTCTAAGGTT...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAAAAGAACAGACGTCCTaGTTGCTGCTGGTAGTGGCA +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAKEQTS*LLLVVA
Trigger: TGCCACTACCAGCAGCAACCAGGACGTCTGTTCTTT...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATAGCCTTCAGGCTCAATaGTTGAGATGGGAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: YIKMCCKACRQLVALAINSLQAQ*LRWELS
Trigger: AGAGAGCTCCCATCTCAATCATTGAGCCTGAAGGCT...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACTGAGGCACAGGCATTaGAAACAAATTTTGCCTACC +
Preference number: 2 (lower is better)
Translates to: LEIYKCVRLASYANVALQLRHRH*KQILPT
Trigger: GGTAGGCAAAATTTGTTTTCAATGCCTGTGCCTCAG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATTCTGTCCCTGTCTTTTaGTTCTTACTTTATCCACTG +
Preference number: 2 (lower is better)
Translates to: TTLVTTVCVILELLQGVDSVPVF*FLLYPL
Trigger: CAGTGGATAAAGTAAGAAGCAAAAGACAGGGACAGA...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAAACCTTAGACAGGCTTaGGTTTTAAACACAACACTT +
Preference number: 2 (lower is better)
Translates to: SQYSPQSVKCCRANCTCINLRQA*VLNTTL
Trigger: AAGTGTTGTGTTTAAAACCCAAGCCTGTCTAAGGTT...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAAGTGCTCTTAGATGGTaGAGCAGACCTTCCAAAACA +
Preference number: 2 (lower is better)
Translates to: LEIYKCVRLASYANVALQSALRW*SRPSKT
Trigger: TGTTTTGGAAGGTCTGCTCCACCATCTAAGAGCACT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCAAAAAGATCGGTTCATaGATGATGCTTCCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSKKIGS*MMLPPP
Trigger: TGGAGGAGGAAGCATCATTCATGAACCGATCTTTTT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATGATATGGGAAAAGAATaGACCACAAGTGGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: YIKMCCKACRQLVALAINDMGKE*TTSGLQ
Trigger: CTGGAGGCCACTTGTGGTTCATTCTTTTCCCATATC...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATATCTGTGGGGGAAGATaGGAGTTTAGAGACTCTGGA +
Preference number: 2 (lower is better)
Translates to: YIKMCCKACRQLVALAINICGGR*EFRDSG
Trigger: TCCAGAGTCTCTAAACTCTCATCTTCCCCCACAGAT...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAATGGCAGTTTCTTTCCTaGGAACAGGATTTGAAAGAA +
Preference number: 2 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEWQFLS*EQDLKE
Trigger: TTCTTTCAAATCCTGTTCTCAGGAAAGAAACTGCCA...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAATCTGTCCCTGTCTTTTaGTTCTTACTTTATCCACTG +
Preference number: 2 (lower is better)
Translates to: PLGLRPCSVILKNKCLWESVPVF*FLLYPL
Trigger: CAGTGGATAAAGTAAGAAGCAAAAGACAGGGACAGA...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACTCTGTCCCTGTCTTTTaGTTCTTACTTTATCCACTG +
Preference number: 2 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNSVPVF*FLLYPL
Trigger: CAGTGGATAAAGTAAGAAGCAAAAGACAGGGACAGA...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
3UTR-3UTR TCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAAAAAAGATCGGTTCATaGATGATGCTTCCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAKKIGS*MMLPPP
Trigger: TGGAGGAGGAAGCATCATTCATGAACCGATCTTTTT...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATTTACTACCGTTTGTGTaGTCCTTGAACTCCTACAGG +
Preference number: 2 (lower is better)
Translates to: YIKMCCKACRQLVALAINLLPFV*SLNSYR
Trigger: CCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAA...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATGCCGATAAACATCCTTaGATTGGACAGAGTTGTGAC +
Preference number: 2 (lower is better)
Translates to: YIKMCCKACRQLVALAINADKHP*IGQSCD
Trigger: GTCACAACTCTGTCCAATTCAAGGATGTTTATCGGC...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAATCAAGAAGCACCCCTaGAAAAACTATGAGATAAGA +
Preference number: 2 (lower is better)
Translates to: LEIYKCVRLASYANVALQIKKHP*KNYEIR
Trigger: TCTTATCTCATAGTTTTTTCAGGGGTGCTTCTTGAT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR TCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATAGATATACAAATGCGTaGGGCTGGCATCATATGCAA +
Preference number: 2 (lower is better)
Translates to: YIKMCCKACRQLVALAINRYTNA*GWHHMQ
Trigger: TTGCATATGATGCCAGCCTCACGCATTTGTATATCT...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCATTGGGACAATGGTCCTaGGGTAATTCTGAGATATAT +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDALGQWS*GNSEIY
Trigger: ATATATCTCAGAATTACCCCAGGACCATTGTCCCAA...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR GCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACGTGCAAATTGCACGTaGATATGCATTTTTACTATA +
Preference number: 2 (lower is better)
Translates to: LEIYKCVRLASYANVALQRANCT*ICIFTI
Trigger: TATAGTAAAAATGCATATGCACGTGCAATTTGCACG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAAAAAACAAATGTCTGTaGGAAGAGGTAACTCATTCC +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAKNKCL*EEVTHS
Trigger: GGAATGAGTTACCTCTTCCCACAGACATTTGTTTTT...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAAGGTCTTACTCTTACTaGGTTTTAAGGAAATTCAGG +
Preference number: 2 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDARSYSY*VLRKFR
Trigger: CCTGAATTTCCTTAAAACCCAGTAAGAGTAAGACCT...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATAACCTTAGACAGGCTTaGGTTTTAAACACAACACTT +
Preference number: 2 (lower is better)
Translates to: YIKMCCKACRQLVALAINNLRQA*VLNTTL
Trigger: AAGTGTTGTGTTTAAAACCCAAGCCTGTCTAAGGTT...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR TCA 72 bp GAGGGTACTGTGGCTGTCTGGTGGGGGATGGGAAGCTaGTGGGATCCTAAGATGGGTATTTGTGACAGCAGC +
Preference number: 3 (lower is better)
Translates to: EGTVAVWWGMGS*WDPKMGICDSS
Trigger: GCTGCTGTCACAAATACCCATCTTAGGATCCCATCAGCTTCCCATCCCCCACCAGACAGCCACAGTACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR GCA 72 bp AGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGAATaGATCAGGTGCCTCAGTTTTGCCTCTGTTTCCCCA +
Preference number: 3 (lower is better)
Translates to: RAVNGTAAQQAE*IRCLSFASVSP
Trigger: TGGGGAAACAGAGGCAAAACTGAGGCACCTGATGCATTCAGCCTGCTGTGCAGCAGTGCCATTGACTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTTGTCTAGGGACAGTCTaGGTAGCTCAGACTGACCTC +
Preference number: 3 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQACLGTV*VAQTDL
Trigger: GAGGTCAGTCTGAGCTACCAAGACTGTCCCTAGACA...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR TCA 72 bp CATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTaGATGCATCAGGTGCCTCAGTTTTGCCTCTGTTTC +
Preference number: 3 (lower is better)
Translates to: HQGSQWHCCTAG*MHQVPQFCLCF
Trigger: GAAACAGAGGCAAAACTGAGGCACCTGATGCATTCAGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR GCA 72 bp AATGGCACTGCTGCACAGCAGGCTGAATGCATCAGGTaGCTCAGTTTTGCCTCTGTTTCCCCATCCACACCT +
Preference number: 3 (lower is better)
Translates to: NGTAAQQAECIR*LSFASVSPSTP
Trigger: AGGTGTGGATGGGGAAACAGAGGCAAAACTGAGGCACCTGATGCATTCAGCCTGCTGTGCAGCAGTGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR CCA 72 bp TCTGGTGGGGGATGGGAAGCTGATGGGATCCTAAGATaGGTATTTGTGACAGCAGCTGAGGCACAGGCATTG +
Preference number: 3 (lower is better)
Translates to: SGGGWEADGILR*VFVTAAEAQAL
Trigger: CAATGCCTGTGCCTCAGCTGCTGTCACAAATACCCATCTTAGGATCCCATCAGCTTCCCATCCCCCACCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTTGTCTAGGGACAGTCTaGGTAGCTCAGACTGACCTC +
Preference number: 3 (lower is better)
Translates to: VSVSPITSEFLVGREWVICLGTV*VAQTDL
Trigger: GAGGTCAGTCTGAGCTACCAAGACTGTCCCTAGACA...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTTCAGGTGCCTCAGTTTaGCCTCTGTTTCCCCATCCA +
Preference number: 3 (lower is better)
Translates to: VSVSPITSEFLVGREWVISGASV*PLFPHP
Trigger: TGGATGGGGAAACAGAGGCAAAACTGAGGCACCTGA...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR TCA 72 bp CTCACTCAGGATCTAAGAGAGGCCGATAAACATCCTTaGATTGGACAGAGTTGTGACCAAGCAGCCCGGGCG +
Preference number: 3 (lower is better)
Translates to: LTQDLREADKHP*IGQSCDQAARA
Trigger: CGCCCGGGCTGCTTGGTCACAACTCTGTCCAATTCAAGGATGTTTATCGGCCTCTCTTAGATCCTGAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR GCA 72 bp CCAGGGGAGCTGAGAAATGTAGGCTGGGGGTCTTGTTaGATTCTTGGGCTTGAAGCCTTCAGGCTCAATGAT +
Preference number: 3 (lower is better)
Translates to: PGELRNVGWGSC*ILGLEAFRLND
Trigger: ATCATTGAGCCTGAAGGCTTCAAGCCCAAGAATGCAACAAGACCCCCAGCCTACATTTCTCAGCTCCCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR CCA 72 bp GAGAAAGTGAGGGTACTGTGGCTGTCTGGTGGGGGATaGGAAGCTGATGGGATCCTAAGATGGGTATTTGTG +
Preference number: 3 (lower is better)
Translates to: EKVRVLWLSGGG*EADGILRWVFV
Trigger: CACAAATACCCATCTTAGGATCCCATCAGCTTCCCATCCCCCACCAGACAGCCACAGTACCCTCACTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTTGCATTCTTGGGCTaGAAGCCTTCAGGCTCAATG +
Preference number: 3 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGVAFLG*KPSGSM
Trigger: CATTGAGCCTGAAGGCTTCAAGCCCAAGAATGCAAC...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTGTTGCATTCTTGGGCTaGAAGCCTTCAGGCTCAATG +
Preference number: 3 (lower is better)
Translates to: VSVSPITSEFLVGREWVIVAFLG*KPSGSM
Trigger: CATTGAGCCTGAAGGCTTCAAGCCCAAGAATGCAAC...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTTGGGGGACTCCACCTTaGTCTAGGGACAGTCTTGGT +
Preference number: 3 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIWGTPP*SRDSLG
Trigger: ACCAAGACTGTCCCTAGACAAAGGTGGAGTCCCCCA...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTTGGGGGACTCCACCTTaGTCTAGGGACAGTCTTGGT +
Preference number: 3 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATWGTPP*SRDSLG
Trigger: ACCAAGACTGTCCCTAGACAAAGGTGGAGTCCCCCA...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGAACAGACGTCCTGGTaGCTGCTGGTAGTGGCAGAA +
Preference number: 3 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATEQTSW*LLVVAE
Trigger: TTCTGCCACTACCAGCAGCAACCAGGACGTCTGTTC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTGAACAGACGTCCTGGTaGCTGCTGGTAGTGGCAGAA +
Preference number: 3 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIEQTSW*LLVVAE
Trigger: TTCTGCCACTACCAGCAGCAACCAGGACGTCTGTTC...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCGTTGCATTCTTGGGCTaGAAGCCTTCAGGCTCAATG +
Preference number: 3 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLVAFLG*KPSGSM
Trigger: CATTGAGCCTGAAGGCTTCAAGCCCAAGAATGCAAC...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATATGGGGGACTCCACCTTaGTCTAGGGACAGTCTTGGT +
Preference number: 3 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIWGTPP*SRDSLG
Trigger: ACCAAGACTGTCCCTAGACAAAGGTGGAGTCCCCCA...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTTCAGGTGCCTCAGTTTaGCCTCTGTTTCCCCATCCA +
Preference number: 3 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLSGASV*PLFPHP
Trigger: TGGATGGGGAAACAGAGGCAAAACTGAGGCACCTGA...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR TCA 72 bp CAATTCTCATGGGCAAACCTTGTGTGCGTTTCTCTCTaGACATCAGGGCAGTCAATGGCACTGCTGCACAGC +
Preference number: 3 (lower is better)
Translates to: QFSWANLVCVSL*TSGQSMALLHS
Trigger: GCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCACACAAGGTTTGCCCATGAGAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR TCA 72 bp GTTGCTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTaGAGAGAAGCCTTGCCAGGGTGTACTCAGATTCAC +
Preference number: 3 (lower is better)
Translates to: VAAGSGRIAASV*REALPGCTQIH
Trigger: GTGAATCTGAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATTGGGGGACTCCACCTTaGTCTAGGGACAGTCTTGGT +
Preference number: 3 (lower is better)
Translates to: TTLVTTVCVILELLQGVDWGTPP*SRDSLG
Trigger: ACCAAGACTGTCCCTAGACAAAGGTGGAGTCCCCCA...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATATCAGGTGCCTCAGTTTaGCCTCTGTTTCCCCATCCA +
Preference number: 3 (lower is better)
Translates to: SQYSPQSVKCCRANCTCISGASV*PLFPHP
Trigger: TGGATGGGGAAACAGAGGCAAAACTGAGGCACCTGA...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTCTGGTAGTGGCAGAATaGCTGCTTCAGTCTGAAGAG +
Preference number: 3 (lower is better)
Translates to: RQPGVPYTTLPPRIATPILVVAE*LLQSEE
Trigger: CTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAG...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR TCA 72 bp ATTCACAACCCTGGTTACTACCGTTTGTGTGATCCTTaGACTCCTACAGGGAGTAGATCTGGAGCCACGGCA +
Preference number: 3 (lower is better)
Translates to: IHNPGYYRLCDP*TPTGSRSGATA
Trigger: TGCCGTGGCTCCAGATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR GCA 72 bp GTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTaGCAGGGTGTACTCAGATTCACAACCCTGGTTACT +
Preference number: 3 (lower is better)
Translates to: VAELLLQSEEKP*QGVLRFTTLVT
Trigger: AGTAACCAGGGTTGTGAATCTGAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATACTCCTATTTGTGAGCTaGGATGTGTATCTGTGGGGG +
Preference number: 3 (lower is better)
Translates to: SQYSPQSVKCCRANCTCILLFVS*DVYLWG
Trigger: CCCCCACAGATACACATCCAAGCTCACAAATAGGAG...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCCCTACCACCTAGAATaGCTACTCCTATTTGTGAGC +
Preference number: 3 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLPYHLE*LLLFVS
Trigger: GCTCACAAATAGGAGTAGCAATTCTAGGTGGTAGGG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR CCA 72 bp AAAAGCCAAGGATATGGGAAAAGAATGAACCACAAGTaGCCTCCAGAGCCACAGGGCTTCCTGACTTCATCA +
Preference number: 3 (lower is better)
Translates to: KSQGYGKRMNHK*PPEPQGFLTSS
Trigger: TGATGAAGTCAGGAAGCCCTGTGGCTCTGGAGGCCACTTGTGGTTCATTCTTTTCCCATATCCTTGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCTTGCTTCAATTCTTTTaGCTCAGCACACTAGTTCGG +
Preference number: 3 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLLLQFF*LSTLVR
Trigger: CCGAACTAGTGTGCTGAGCAAAAAGAATTGAAGCAA...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATTGCTTCAATTCTTTTaGCTCAGCACACTAGTTCGG +
Preference number: 3 (lower is better)
Translates to: DYASGQITQEVEGRGKAELLQFF*LSTLVR
Trigger: CCGAACTAGTGTGCTGAGCAAAAAGAATTGAAGCAA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
3UTR-3UTR CAA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCTGTCTAGGGACAGTCTaGGTAGCTCAGACTGACCTC +
Preference number: 3 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLCLGTV*VAQTDL
Trigger: GAGGTCAGTCTGAGCTACCAAGACTGTCCCTAGACA...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAATCAGGTGCCTCAGTTTaGCCTCTGTTTCCCCATCCA +
Preference number: 3 (lower is better)
Translates to: PLGLRPCSVILKNKCLWESGASV*PLFPHP
Trigger: TGGATGGGGAAACAGAGGCAAAACTGAGGCACCTGA...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGCTGAGGCACAGGCATaGAAAACAAATTTTGCCTAC +
Preference number: 3 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLAEAQA*KTNFAY
Trigger: GTAGGCAAAATTTGTTTTCAATGCCTGTGCCTCAGC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTTTGCTTCAATTCTTTTaGCTCAGCACACTAGTTCGG +
Preference number: 3 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFLLQFF*LSTLVR
Trigger: CCGAACTAGTGTGCTGAGCAAAAAGAATTGAAGCAA...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAACTGGTAGTGGCAGAATaGCTGCTTCAGTCTGAAGAG +
Preference number: 3 (lower is better)
Translates to: PLGLRPCSVILKNKCLWELVVAE*LLQSEE
Trigger: CTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAG...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAGGGTCATTTCTGTATTaGTCTCACTCAGGATCTAAG +
Preference number: 3 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLGSFLY*SHSGSK
Trigger: CTTAGATCCTGAGTGAGACAAATACAGAAATGACCC...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGCTGAGGCACAGGCATaGAAAACAAATTTTGCCTAC +
Preference number: 3 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIAEAQA*KTNFAY
Trigger: GTAGGCAAAATTTGTTTTCAATGCCTGTGCCTCAGC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR TCA 72 bp CCAGGAAACACATTAGCCAATACAGTCCACAATCGGTaGAATGCTGCCGTGCAAATTGCACGTGCATATGCA +
Preference number: 3 (lower is better)
Translates to: PGNTLANTVHNR*NAAVQIARAYA
Trigger: TGCATATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCTAATGTGTTTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR CCA 72 bp GATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATaGCTAATATATCAAAATGTGTTGCAAGGCATGCCG +
Preference number: 3 (lower is better)
Translates to: DKEFGACLYPEA*LIYQNVLQGMP
Trigger: CGGCATGCCTTGCAACACATTTTGATATATTAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATATTGCTTCAATTCTTTTaGCTCAGCACACTAGTTCGG +
Preference number: 3 (lower is better)
Translates to: SQYSPQSVKCCRANCTCILLQFF*LSTLVR
Trigger: CCGAACTAGTGTGCTGAGCAAAAAGAATTGAAGCAA...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAGGTCTTGTTGCATTCTaGGGCTTGAAGCCTTCAGGC +
Preference number: 3 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAGLVAF*GLKPSG
Trigger: GCCTGAAGGCTTCAAGCCCAAGAATGCAACAAGACC...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCATCAGGTGCCTCAGTTTaGCCTCTGTTTCCCCATCCA +
Preference number: 3 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDASGASV*PLFPHP
Trigger: TGGATGGGGAAACAGAGGCAAAACTGAGGCACCTGA...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATGAACAGACGTCCTGGTaGCTGCTGGTAGTGGCAGAA +
Preference number: 3 (lower is better)
Translates to: YIKMCCKACRQLVALAINEQTSW*LLVVAE
Trigger: TTCTGCCACTACCAGCAGCAACCAGGACGTCTGTTC...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAATAAACATCCTTGAATaGGACAGAGTTGTGACCAAG +
Preference number: 3 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLINILE*DRVVTK
Trigger: CTTGGTCACAACTCTGTCCAATTCAAGGATGTTTAT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR GCA 72 bp CCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTaGATATGCATTTTTACTATATTCCCTCAGAGACCG +
Preference number: 3 (lower is better)
Translates to: PQSVKCCRANCT*ICIFTIFPQRP
Trigger: CGGTCTCTGAGGGAATATAGTAAAAATGCATATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAGTTGCATTCTTGGGCTaGAAGCCTTCAGGCTCAATG +
Preference number: 3 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAVAFLG*KPSGSM
Trigger: CATTGAGCCTGAAGGCTTCAAGCCCAAGAATGCAAC...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATGGTCTTGTTGCATTCTaGGGCTTGAAGCCTTCAGGC +
Preference number: 3 (lower is better)
Translates to: YIKMCCKACRQLVALAINGLVAF*GLKPSG
Trigger: GCCTGAAGGCTTCAAGCCCAAGAATGCAACAAGACC...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAATAAACATCCTTGAATaGGACAGAGTTGTGACCAAG +
Preference number: 3 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIINILE*DRVVTK
Trigger: CTTGGTCACAACTCTGTCCAATTCAAGGATGTTTAT...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACCCTACCACCTAGAATaGCTACTCCTATTTGTGAGC +
Preference number: 3 (lower is better)
Translates to: LEIYKCVRLASYANVALQPYHLE*LLLFVS
Trigger: GCTCACAAATAGGAGTAGCAATTCTAGGTGGTAGGG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCTTGCTTCAATTCTTTTaGCTCAGCACACTAGTTCGG +
Preference number: 3 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLLLQFF*LSTLVR
Trigger: CCGAACTAGTGTGCTGAGCAAAAAGAATTGAAGCAA...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCACCCTACCACCTAGAATaGCTACTCCTATTTGTGAGC +
Preference number: 3 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAPYHLE*LLLFVS
Trigger: GCTCACAAATAGGAGTAGCAATTCTAGGTGGTAGGG...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR GCA 72 bp CACATTAGCCAATACAGTCCACAATCGGTGAAATGCTaGCGTGCAAATTGCACGTGCATATGCATTTTTACT +
Preference number: 3 (lower is better)
Translates to: HISQYSPQSVKC*RANCTCICIFT
Trigger: AGTAAAAATGCATATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCTAATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR CCA 72 bp GAGCAGACCTTCCAAAACAACAGGTCTTACTCTTACTaGGTTTTAAGGAAATTCAGGAAGTCTCCTTCTACC +
Preference number: 3 (lower is better)
Translates to: EQTFQNNRSYSY*VLRKFRKSPST
Trigger: GGTAGAAGGAGACTTCCTGAATTTCCTTAAAACCCAGTAAGAGTAAGACCTGTTGTTTTGGAAGGTCTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAATAAACATCCTTGAATaGGACAGAGTTGTGACCAAG +
Preference number: 3 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEINILE*DRVVTK
Trigger: CTTGGTCACAACTCTGTCCAATTCAAGGATGTTTAT...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR-3UTR CAA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATCCCTACCACCTAGAATaGCTACTCCTATTTGTGAGC +
Preference number: 3 (lower is better)
Translates to: YIKMCCKACRQLVALAINPYHLE*LLLFVS
Trigger: GCTCACAAATAGGAGTAGCAATTCTAGGTGGTAGGG...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR TCA 72 bp GAGGCATACCTGAATTTCTGGAGATATACAAATGCGTaGGGCTGGCATCATATGCAAATGTGGCTTTACAAA +
Preference number: 3 (lower is better)
Translates to: EAYLNFWRYTNA*GWHHMQMWLYK
Trigger: TTTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAGAAATTCAGGTATGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
3UTR GCA 72 bp AAACACATTAGCCAATACAGTCCACAATCGGTGAAATaGTGCCGTGCAAATTGCACGTGCATATGCATTTTT +
Preference number: 3 (lower is better)
Translates to: KHISQYSPQSVK*CRANCTCICIF
Trigger: AAAAATGCATATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCTAATGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCGGGAAGGTCAGAGGTaGGGCGGCAGAGGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAREGQR*GGRGSR
Trigger: GCGACTGCCTCTGCCGCCTCACCTCTGACCTTCCCG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGGGGAGGGGAAAGGCTaGAGTGGCTCCCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAGEGKG*SGSQKR
Trigger: CCGCTTCTGGGAGCCACTTCAGCCTTTCCCCTCCCC...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGATGGTGCGTCGGAATaGCGCCTGTGTGGCGTCGAG +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQADGASE*RLCGVE
Trigger: CTCGACGCCACACAGGCGTCATTCCGACGCACCATC...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGCCGTGGGTCTCTCCTaGGAGGGCTCTGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGAVGLS*EGSELR
Trigger: CCGCAGCTCAGAGCCCTCTCAGGAGAGACCCACGGC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACAGGCTCCGAGACTCTaGGGAGGTCCTCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEQAPRL*GGPPGQ
Trigger: CTGCCCCGGAGGACCTCCGCAGAGTCTCGGAGCCTG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGAGGCGCGGGCTGGCTaGCTGTGGTGGGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIEARAG*LWWGHL
Trigger: GAGGTGGCCCCACCACAGCCAGCCAGCCCGCGCCTC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGCTGTGGGCTTGCAGTaGCACTGCGACTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAAVGLQ*HCDLGR
Trigger: CCTCCCCAAGTCGCAGTGCCACTGCAAGCCCACAGC...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTGTTCCGAGCCCTCCTaGCTGGGGCCCAGCTCACCC +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGCSEPS*LGPSSP
Trigger: GGGTGAGCTGGGCCCCAGCCAGGAGGGCTCGGAACA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGGGGAGGGGAAAGGCTaGAGTGGCTCCCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEGEGKG*SGSQKR
Trigger: CCGCTTCTGGGAGCCACTTCAGCCTTTCCCCTCCCC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGGCTCGCAGGGCTACTaGTTGGGGTTTCCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAGSQGY*LGFPCR
Trigger: CCTACAGGGAAACCCCAAGCAGTAGCCCTGCGAGCC...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTCAGGCTCCGAGACTCTaGGGAGGTCCTCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFQAPRL*GGPPGQ
Trigger: CTGCCCCGGAGGACCTCCGCAGAGTCTCGGAGCCTG...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGGGCCAGAGAACGCCTaGCTGGGACCCCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGGPENA*LGPPQS
Trigger: TGACTGTGGGGGTCCCAGGCAGGCGTTCTCTGGCCC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGGGAAGACAGGCGTGTaGGAACCACGGGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEGKTGV*EPRASP
Trigger: GGGGGAAGCCCGTGGTTCCCACACGCCTGTCTTCCC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATACGGGAAGGTCAGAGGTaGGGCGGCAGAGGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIREGQR*GGRGSR
Trigger: GCGACTGCCTCTGCCGCCTCACCTCTGACCTTCCCG...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCCAGCGGAGGTGGTGGTaGGAAGGATGGTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLQRRWW*EGWWRL
Trigger: CAGACGCCACCATCCTTCTCACCACCACCTCCGCTG...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTAGCCCACTCAGGCCCTaGAGAGGGATGTCACCACCT +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVISPLRP*RGMSPP
Trigger: AGGTGGTGACATCCCTCTTCAGGGCCTGAGTGGGCT...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGATGGTGCGTCGGAATaGCGCCTGTGTGGCGTCGAG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEDGASE*RLCGVE
Trigger: CTCGACGCCACACAGGCGTCATTCCGACGCACCATC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGACTCCTGTCGGGGGTaGCTCTTCGCTGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGDSCRG*LFAAGL
Trigger: AAGCCCAGCAGCGAAGAGTCACCCCCGACAGGAGTC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTCTTCGCTGCTGGGCTTaGGGTTGCTGTGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVILRCWA*GCCGLA
Trigger: TGCAAGCCCACAGCAACCTCAAGCCCAGCAGCGAAG...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306402.10
ENST00000371249.6
CDS-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGGGGAGGGGAAAGGCTaGAGTGGCTCCCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLGEGKG*SGSQKR
Trigger: CCGCTTCTGGGAGCCACTTCAGCCTTTCCCCTCCCC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGGGGAGGGGAAAGGCTaGAGTGGCTCCCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATGEGKG*SGSQKR
Trigger: CCGCTTCTGGGAGCCACTTCAGCCTTTCCCCTCCCC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGGAGGGGAAAGGCTaGAGTGGCTCCCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEGEGKG*SGSQKR
Trigger: CCGCTTCTGGGAGCCACTTCAGCCTTTCCCCTCCCC...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAGGGGAGGGGAAAGGCTaGAGTGGCTCCCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLGEGKG*SGSQKR
Trigger: CCGCTTCTGGGAGCCACTTCAGCCTTTCCCCTCCCC...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTAATTGGACAGAGTTGTaGCCAAGCAGCCCGGGCGTC +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQANWTEL*PSSPGV
Trigger: GACGCCCGGGCTGCTTGGTCACAACTCTGTCCAATT...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGGCTCGCAGGGCTACTaGTTGGGGTTTCCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGGSQGY*LGFPCR
Trigger: CCTACAGGGAAACCCCAAGCAGTAGCCCTGCGAGCC...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGCCTCCTGCCGCTGGTaGTGTACTCCTGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGASCRW*CTPGGS
Trigger: TGAGCCTCCAGGAGTACAGCACCAGCGGCAGGAGGC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTCCGGCTGGGCTGCACTaGAGGAAGTGGCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIPAGLH*RKWHPG
Trigger: CCCAGGATGCCACTTCCTCCAGTGCAGCCCAGCCGG...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCCGGCTGGGCTGCACTaGAGGAAGTGGCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLPAGLH*RKWHPG
Trigger: CCCAGGATGCCACTTCCTCCAGTGCAGCCCAGCCGG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTACCGGCTGGGCTGCACTaGAGGAAGTGGCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLPAGLH*RKWHPG
Trigger: CCCAGGATGCCACTTCCTCCAGTGCAGCCCAGCCGG...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAGAGGCGCGGGCTGGCTaGCTGTGGTGGGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEEARAG*LWWGHL
Trigger: GAGGTGGCCCCACCACAGCCAGCCAGCCCGCGCCTC...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGAGGCGCGGGCTGGCTaGCTGTGGTGGGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNEARAG*LWWGHL
Trigger: GAGGTGGCCCCACCACAGCCAGCCAGCCCGCGCCTC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTTCGCGCCATGGCTGTaGGCTTGCAGTGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGFAPWL*ACSGTA
Trigger: CGCAGTGCCACTGCAAGCCCACAGCCATGGCGCGAA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371246.6
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGGTGGGAAGATGCATTaGTCCAGGAGCTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAGGKMH*SRSSGQ
Trigger: CTGCCCAGAGCTCCTGGACCAATGCATCTTCCCACC...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGATGTTGCCGGGTTTCCTaGGGGCTCGCAGGGCTACTG +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGCCRVS*GLAGLL
Trigger: CAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACA...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTCAGCGGAGGTGGTGGTaGGAAGGATGGTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIQRRWW*EGWWRL
Trigger: CAGACGCCACCATCCTTCTCACCACCACCTCCGCTG...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATCGAAACAGCTCCCGTaGGGTCAGGCTCCGAGACTC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAESKQLP*GQAPRL
Trigger: GAGTCTCGGAGCCTGACCTCACGGGAGCTGTTTCGA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCCCCAGGAGCCCCGTCTaGTTCCCTCTTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLPRSPV*FPLHCM
Trigger: CATGCAGTGAAGAGGGAATCAGACGGGGCTCCTGGG...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCCCAGGAGCCCCGTCTaGTTCCCTCTTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGPRSPV*FPLHCM
Trigger: CATGCAGTGAAGAGGGAATCAGACGGGGCTCCTGGG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAGCTGGATGGTCGCTTaGGCCCACTCAGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAESWMVA*AHSGPE
Trigger: TTCAGGGCCTGAGTGGGCTCAAGCGACCATCCAGCT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTGACTCCTGTCGGGGGTaGCTCTTCGCTGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIDSCRG*LFAAGL
Trigger: AAGCCCAGCAGCGAAGAGTCACCCCCGACAGGAGTC...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACTTCGCTGCTGGGCTTaGGGTTGCTGTGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAELRCWA*GCCGLA
Trigger: TGCAAGCCCACAGCAACCTCAAGCCCAGCAGCGAAG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAGATCCACTCAGAGGTaGCAGCGTGCATCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGRSTQR*QRASRG
Trigger: CCCCCGAGATGCACGCTGTCACCTCTGAGTGGATCT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGCAGGCCTTCGCAGCTaGCAGGGGCTTCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGAGLRS*QGLLVL
Trigger: AAGCACAAGAAGCCCCTGTCAGCTGCGAAGGCCTGC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGGCTCGCAGGGCTACTaGTTGGGGTTTCCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEGSQGY*LGFPCR
Trigger: CCTACAGGGAAACCCCAAGCAGTAGCCCTGCGAGCC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR GCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCTGCTCGCCACCTCTATaGCGCTCTGTCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLCSPPL*RSVCSA
Trigger: GGCTGAGCAGACAGAGCGGCATAGAGGTGGCGAGCA...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTGCTCGCCACCTCTATaGCGCTCTGTCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGCSPPL*RSVCSA
Trigger: GGCTGAGCAGACAGAGCGGCATAGAGGTGGCGAGCA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR GCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAGCTTTCCTCCCCGCCTaGTCGCCACCTCTATGCCGC +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRAFLPA*SPPLCR
Trigger: GCGGCATAGAGGTGGCGAGCAGGCGGGGAGGAAAGC...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR GCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCACTCGCACTACACGCTaGAGCTGGCCCCGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLTRTTR*SWPRSV
Trigger: AACAGAGCGGGGCCAGCTGCAGCGTGTAGTGCGAGT...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306402.10
CDS-3UTR GCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTTCTTCGCGCCATGGCTaGCTCTTGCTCTGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVISSRHG*LLLWLL
Trigger: TAGCAGCCAGAGCAAGAGGCAGCCATGGCGCGAAGA...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR GCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCCGCTTCCTGTGGGCTTaGAGTGGCACTGCGACTTGG +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLRFLWA*SGTATW
Trigger: CCAAGTCGCAGTGCCACTGCAAGCCCACAGGAAGCG...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCGCAGGGCTACTGCTTaGGGTTTCCCTGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQARRATA*GFPVGR
Trigger: TCTTCCTACAGGGAAACCCCAAGCAGTAGCCCTGCG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCACTTCTGTAGCCCTTaGCAGCGAGTGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAHFCSP*QRVKRA
Trigger: AGCCCTCTTCACTCGCTGCCAAGGGCTACAGAAGTG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCTGCACTGGAGGAAGTaGCATCCTGGGACTTGTCAG +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQALHWRK*HPGTCQ
Trigger: CTGACAAGTCCCAGGATGCCACTTCCTCCAGTGCAG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCCTTGCCAGGTGAGGTaGGTTTTTCCTGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAPCQVR*VFPGLV
Trigger: CACCAACCCAGGAAAAACCCACCTCACCTGGCAAGG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTATTCCCACCCGGCCGTaGTGTTCTCCTTCATACCAG +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAIPTRP*CSPSYQ
Trigger: CTGGTATGAAGGAGAACACCACGGCCGGGTGGGAAT...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACTCGATGTAGGTGCGTaGGAAGATTCCCACCCGGCC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAELDVGA*EDSHPA
Trigger: GGCCGGGTGGGAATCTTCCCACGCACCTACATCGAG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAGCTGTGGGCTTGCAGTaGCACTGCGACTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLAVGLQ*HCDLGR
Trigger: CCTCCCCAAGTCGCAGTGCCACTGCAAGCCCACAGC...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCACTGTGGGCTTGCAGTaGCACTGCGACTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLTVGLQ*HCDLGR
Trigger: CCTCCCCAAGTCGCAGTGCCACTGCAAGCCCACAGT...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGAGACAGGGAGGGACTaGCCCTTGGTGACAAGGCGA +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEETGRD*PLVTRR
Trigger: TCGCCTTGTCACCAAGGGCCAGTCCCTCCCTGTCTC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTGCTCTTGTCCCCTCTaGCATCCAGGCGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGCSCPL*HPGATQ
Trigger: CTGAGTGGCGCCTGGATGCCAGAGGGGACAAGAGCA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTCCTGTGGGCTTGCAGTaGCACTGCGACTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFPVGLQ*HCDLGR
Trigger: CCTCCCCAAGTCGCAGTGCCACTGCAAGCCCACAGG...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649911.1
CDS-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATATGTTGCCGGGTTTCCTaGGGGCTCGCAGGGCTACTG +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCICCRVS*GLAGLL
Trigger: CAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACA...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCCAGCCTGGGTGACATaGCAGAGCAAGACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAPAWVT*QSKTLS
Trigger: AGACAAAGTCTTGCTCTGTCATGTCACCCAGGCTGG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371246.6
CDS-3UTR TCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGGCTGCAGTGAGCTATaGCTGTACCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGGCSEL*LYHCTP
Trigger: TGGAGTGCAGTGGTACAGTCATAGCTCACTGCAGCC...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371246.6
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAGTAGGGCTGATGGCTaGGCTCTGTGGCACGTTTGC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAESRADG*ALWHVC
Trigger: GCAAACGTGCCACAGAGCTCAGCCATCAGCCCTACT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
CDS-3UTR TCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGACCCAGGAGCCCCGTCTaGTTCCCTCTTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGPRSPV*FPLHCM
Trigger: CATGCAGTGAAGAGGGAATCAGACGGGGCTCCTGGG...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
CDS-3UTR TCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCCCAGGAGCCCCGTCTaGTTCCCTCTTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEPRSPV*FPLHCM
Trigger: CATGCAGTGAAGAGGGAATCAGACGGGGCTCCTGGG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
CDS-3UTR TCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAAGCCCACTCAGGCCCTaGAGAGGGATGTCACCACCT +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGSPLRP*RGMSPP
Trigger: AGGTGGTGACATCCCTCTTCAGGGCCTGAGTGGGCT...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
CDS-3UTR TCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAAGCTGGATGGTCGCTTaGGCCCACTCAGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGSWMVA*AHSGPE
Trigger: TTCAGGGCCTGAGTGGGCTCAAGCGACCATCCAGCT...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
CDS-3UTR TCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTGCACCTGACCACGTCTaGAGGCTTCAAGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIAPDHV*RLQAAL
Trigger: AAGAGCTGCTTGAAGCCTTCAGACGTGGTCAGGTGC...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAGACTCCTGTCGGGGGTaGCTCTTCGCTGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRDSCRG*LFAAGL
Trigger: AAGCCCAGCAGCGAAGAGTCACCCCCGACAGGAGTC...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTCTTGGTAGCTCAGACTaGCCTCCAGCAGCGTTACAG +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGLGSSD*PPAALQ
Trigger: CTGTAACGCTGCTGGAGGTCAGTCTGAGCTACCAAG...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTCTTGGTAGCTCAGACTaGCCTCCAGCAGCGTTACAG +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVILGSSD*PPAALQ
Trigger: CTGTAACGCTGCTGGAGGTCAGTCTGAGCTACCAAG...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTCCTCAGCAGGTTGAGTaGGGGATTTGGTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGPQQVE*GIWSWA
Trigger: TGCCCAAGACCAAATCCCTCACTCAACCTGCTGAGG...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCTCCCCAATCACCTCTaGGTTTCTGGTGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGLPNHL*VSGGQG
Trigger: TCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGTCCAGGCTGTGGTCTaGGTATGGCACGGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEVQAVV*VWHGVS
Trigger: GGAAACTCCGTGCCATACTCAGACCACAGCCTGGAC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCATCCCAGCCTTTCTTaGGAGAGGACAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGHPSLS*ERTGPP
Trigger: AGGAGGCCCTGTCCTCTCTCAAGAAAGGCTGGGATG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGCTGCTCAAAAGCGGTaGTGCGGGAAGAGACGGTGT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGAAQKR*CGKRRC
Trigger: ACACCGTCTCTTCCCGCATCACCGCTTTTGAGCAGC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAAGGCACAAGGCCCCTaGAGCTCAAGGCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGKAQGP*SSRHGV
Trigger: CACACCATGCCTTGAGCTTCAGGGGCCTTGTGCCTT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTCCCATTGCTGCCAGGTaGCAAGCCATTCATCACAGC +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIPIAAR*QAIHHS
Trigger: GCTGTGATGAATGGCTTGGCACCTGGCAGCAATGGG...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTGGCTCGCAGGGCTACTaGTTGGGGTTTCCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFGSQGY*LGFPCR
Trigger: CCTACAGGGAAACCCCAAGCAGTAGCCCTGCGAGCC...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCCAGGCTCCGAGACTCTaGGGAGGTCCTCCGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLQAPRL*GGPPGQ
Trigger: CTGCCCCGGAGGACCTCCGCAGAGTCTCGGAGCCTG...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTCGCTTAAGTCCTGAGTaGTCTTCACCACCCGCCTAC +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGRLSPE*SSPPAY
Trigger: GTAGGCGGGTGGTGAAGAGCACTCAGGACTTAAGCG...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTGAAGCTCGATGTAGGTaGGTGGGAAGATTCCCACCC +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIEARCR*VGRFPP
Trigger: GGGTGGGAATCTTCCCACGCACCTACATCGAGCTTC...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCAGTTCTCATCTACCTaGCGGAGCAGTGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAQFSST*RSSVIL
Trigger: GAGGATCACACTGCTCCGGCAGGTAGATGAGAACTG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGGCTTGCAGTGGCACTaGGACTTGGGGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATGLQWH*DLGRRR
Trigger: TCTCCTCCTCCCCAAGTCGCAGTGCCACTGCAAGCC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCTTGCAGTGGCACTaGGACTTGGGGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEGLQWH*DLGRRR
Trigger: TCTCCTCCTCCCCAAGTCGCAGTGCCACTGCAAGCC...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGCTTGCAGTGGCACTaGGACTTGGGGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGGLQWH*DLGRRR
Trigger: TCTCCTCCTCCCCAAGTCGCAGTGCCACTGCAAGCC...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTACCATGGCTGTGGGCTTaGAGTGGCACTGCGACTTGG +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLPWLWA*SGTATW
Trigger: CCAAGTCGCAGTGCCACTGCAAGCCCACAGCCATGG...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371246.6
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAGGTTGCTGTGGGCTTaGAGTGGCACTGCGACTTGG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGRLLWA*SGTATW
Trigger: CCAAGTCGCAGTGCCACTGCAAGCCCACAGCAACCT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR GCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTTCAGAGGTGACAGCGTaGATCTCGGGGGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFSEVTA*ISGDRA
Trigger: AGCCCTGTCCCCCGAGATGCACGCTGTCACCTCTGA...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACGGGAAGAGACGGTGTaGTTGGGGATGTGTTCCGAG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEREETV*LGMCSE
Trigger: CTCGGAACACATCCCCAAGCACACCGTCTCTTCCCG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGGGCTGAGGTCAGGCTaGCCCGGGACAGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTGLRSG*PGTAQV
Trigger: CACCTGTGCTGTCCCGGGGCAGCCTGACCTCAGCCC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGGAAGCAGAGCTGGATaGTCGCTTGAGCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEGSRAG*SLEPTQ
Trigger: CTGAGTGGGCTCAAGCGACCATCCAGCTCTGCTTCC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGGAATGACGCCTGTGTaGCGTCGAGCTGCAATATCA +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAGMTPV*RRAAIS
Trigger: TGATATTGCAGCTCGACGCCACACAGGCGTCATTCC...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTCTCGATGTAGGTGCGTaGGAAGATTCCCACCCGGCC +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPILDVGA*EDSHPA
Trigger: GGCCGGGTGGGAATCTTCCCACGCACCTACATCGAG...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAGTGGCACTGCGACTTaGGGAGGAGGAGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGSGTAT*GGGERQ
Trigger: CTGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAGTGGCACTGCGACTTaGGGAGGAGGAGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAESGTAT*GGGERQ
Trigger: CTGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAACTCTCTTCGCGCCATaGCTGTGGGCTTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLTLFAP*LWACSG
Trigger: GCCACTGCAAGCCCACAGCCATGGCGCGAAGAGAGT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371246.6
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCAAGTCGTCTGCAACTaGGGCTCTGAACTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAQVVCN*GSELLS
Trigger: ACTGAGCAGTTCAGAGCCCCAGTTGCAGACGACTTG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGCTTGAGGTTGCTGTaGGCTTGCAGTGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGGLRLL*ACSGTA
Trigger: CGCAGTGCCACTGCAAGCCCACAGCAACCTCAAGCC...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371249.6
ENST00000634504.1
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGGGGAAAGGCTGAAGTaGCTCCCAGAAGCGGCTAAG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEGERLK*LPEAAK
Trigger: CTTAGCCGCTTCTGGGAGCCACTTCAGCCTTTCCCC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCATCAGGGCAGTCAATaGCACTGCTGCACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGHQGSQ*HCCTAG
Trigger: GCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTAAAGTGAGGGTACTGTaGCTGTCTGGTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIKVRVL*LSGGGW
Trigger: CCATCCCCCACCAGACAGCCACAGTACCCTCACTTT...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGGGACAGCACAGGTGTaGGAGACTTGCTCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEGTAQV*ETCSAF
Trigger: GAAGGCTGAGCAAGTCTCCCACACCTGTGCTGTCCC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTGCAAACCGCTTCCTGTaGGCTTGCAGTGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFANRFL*ACSGTA
Trigger: CGCAGTGCCACTGCAAGCCCACAGGAAGCGGTTTGC...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649911.1
3UTR CAA 72 bp GAACAGACGTCCTGGTTGCTGCTGGTAGTGGCAGAATaGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: EQTSWLLLVVAE*LLQSEEKPCQG
Trigger: ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAGCAACCAGGACGTCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATTGTTGCCGGGTTTCCTaGGGGCTCGCAGGGCTACTG +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDCCRVS*GLAGLL
Trigger: CAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACA...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCCTCCACTCATCTGCTaGAGAAGGCTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEPPLIC*RRLWLQ
Trigger: CTGGAGCCAGAGCCTTCTTCAGCAGATGAGTGGAGG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCCGGGAAGGTCAGAGGTaGGGCGGCAGAGGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSREGQR*GGRGSR
Trigger: GCGACTGCCTCTGCCGCCTCACCTCTGACCTTCCCG...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATATCGAAACAGCTCCCGTaGGGTCAGGCTCCGAGACTC +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCISKQLP*GQAPRL
Trigger: GAGTCTCGGAGCCTGACCTCACGGGAGCTGTTTCGA...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAACATCGCTTAAGTCCTaGGTGCTCTTCACCACCCGC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAETSLKS*VLFTTR
Trigger: GCGGGTGGTGAAGAGCACTCAGGACTTAAGCGATGT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTAGTAGGGCTGATGGCTaGGCTCTGTGGCACGTTTGC +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATSRADG*ALWHVC
Trigger: GCAAACGTGCCACAGAGCTCAGCCATCAGCCCTACT...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATACCCAGGAGCCCCGTCTaGTTCCCTCTTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIPRSPV*FPLHCM
Trigger: CATGCAGTGAAGAGGGAATCAGACGGGGCTCCTGGG...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAAGCTGGATGGTCGCTTaGGCCCACTCAGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCISWMVA*AHSGPE
Trigger: TTCAGGGCCTGAGTGGGCTCAAGCGACCATCCAGCT...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATGACTCCTGTCGGGGGTaGCTCTTCGCTGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDDSCRG*LFAAGL
Trigger: AAGCCCAGCAGCGAAGAGTCACCCCCGACAGGAGTC...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATACTTCGCTGCTGGGCTTaGGGTTGCTGTGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCILRCWA*GCCGLA
Trigger: TGCAAGCCCACAGCAACCTCAAGCCCAGCAGCGAAG...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306402.10
ENST00000371249.6
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCCTCAGCAGGTTGAGTaGGGGATTTGGTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGPQQVE*GIWSWA
Trigger: TGCCCAAGACCAAATCCCTCACTCAACCTGCTGAGG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGCCTCTCTCTTCTaGTCTGGCCCCCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGGASLF*SGPHKE
Trigger: TTCTTTGTGGGGGCCAGATCAGAAGAGAGAGGCCCC...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTGGGGCCTCTCTCTTCTaGTCTGGCCCCCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFGASLF*SGPHKE
Trigger: TTCTTTGTGGGGGCCAGATCAGAAGAGAGAGGCCCC...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGGGGCCTCTCTCTTCTaGTCTGGCCCCCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLGASLF*SGPHKE
Trigger: TTCTTTGTGGGGGCCAGATCAGAAGAGAGAGGCCCC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTACTCCCCAATCACCTCTaGGTTTCTGGTGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLLPNHL*VSGGQG
Trigger: TCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAG...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGACTCCCCAATCACCTCTaGGTTTCTGGTGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGLPNHL*VSGGQG
Trigger: TCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAG...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATGGGGGATGGGAAGCTaGTGGGATCCTAAGATGGGT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEWGMGS*WDPKMG
Trigger: ACCCATCTTAGGATCCCATCAGCTTCCCATCCCCCA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCTGGGGGATGGGAAGCTaGTGGGATCCTAAGATGGGT +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLWGMGS*WDPKMG
Trigger: ACCCATCTTAGGATCCCATCAGCTTCCCATCCCCCA...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTACAATAGGGAGAAAGTaGGGGTACTGTGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQATIGRK*GYCGCL
Trigger: CAGACAGCCACAGTACCCTCACTTTCTCCCTATTGT...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGACCCCCACAGTCAGTaGGATCCACTCAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEDPHSQ*DPLRGD
Trigger: GTCACCTCTGAGTGGATCTCACTGACTGTGGGGGTC...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACTCCTGAGAGGGCTCTaGGCTGCGGCTAAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTLLRGL*AAAKPG
Trigger: GCCAGGCTTAGCCGCAGCTCAGAGCCCTCTCAGGAG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATTGGGGAAATCTCCATaGACACTGCCGCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAELGKSP*TLPPLP
Trigger: AGGCAGTGGCGGCAGTGTTCATGGAGATTTCCCCAA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACCCATTGCTGCCAGGTaGCAAGCCATTCATCACAGC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEPIAAR*QAIHHS
Trigger: GCTGTGATGAATGGCTTGGCACCTGGCAGCAATGGG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR GCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTTGTCTTGCCCATTGCTaGCAGGTGCCAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVICLAHC*QVPSHS
Trigger: TGAATGGCTTGGCACCTGGCAGCAATGGGCAAGACA...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGCTCCAGACCTGGTTTaGTTTCGTGTTGCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGAPDLV*FRVAGF
Trigger: AAACCCGGCAACACGAAAGCAAACCAGGTCTGGAGC...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAAGCTCGATGTAGGTaGGTGGGAAGATTCCCACCC +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGEARCR*VGRFPP
Trigger: GGGTGGGAATCTTCCCACGCACCTACATCGAGCTTC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR GCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGGCTTGCAGTGGCACTaGGACTTGGGGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIGLQWH*DLGRRR
Trigger: TCTCCTCCTCCCCAAGTCGCAGTGCCACTGCAAGCC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGCTTTCCTCCCCGCCTaGTCGCCACCTCTATGCCGC +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNAFLPA*SPPLCR
Trigger: GCGGCATAGAGGTGGCGAGCAGGCGGGGAGGAAAGC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR GCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTAGGTTGCTGTGGGCTTaGAGTGGCACTGCGACTTGG +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFRLLWA*SGTATW
Trigger: CCAAGTCGCAGTGCCACTGCAAGCCCACAGCAACCT...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306402.10
ENST00000371249.6
CDS-3UTR GCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGAGGTTGCTGTGGGCTTaGAGTGGCACTGCGACTTGG +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVERLLWA*SGTATW
Trigger: CCAAGTCGCAGTGCCACTGCAAGCCCACAGCAACCT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371249.6
ENST00000634504.1
CDS-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGGCTGGGGGTCTTGTTaGATTCTTGGGCTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEGWGSC*ILGLEA
Trigger: GGCTTCAAGCCCAAGAATGCAACAAGACCCCCAGCC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCAATCGGTGAAATGCTaGCGTGCAAATTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAQSVKC*RANCTC
Trigger: GCACGTGCAATTTGCACGGCAGCATTTCACCGATTG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTAAGGAGTTTGGGGCTTaGCTTTACCCGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGKEFGA*LYPEAW
Trigger: CCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTT...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCTCCCCAGCGGCAGCTaGAAGAAGCTATCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATLPSGS*KKLSWW
Trigger: CCACCAAGATAGCTTCTTGCAGCTGCCGCTGGGGAG...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR CCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTCAGAACTCATGGTGGTaGCAGGACAAGTCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGQNSWW*QDKSSA
Trigger: TGCAGACGACTTGTCCTGCCACCACCATGAGTTCTG...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCGCAGGGCTACTGCTTaGGGTTTCCCTGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGRRATA*GFPVGR
Trigger: TCTTCCTACAGGGAAACCCCAAGCAGTAGCCCTGCG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCTCTGGCTCCAGACCTaGTTTGCTTTCGTGTTGCCG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGLWLQT*FAFVLP
Trigger: CGGCAACACGAAAGCAAACCAGGTCTGGAGCCAGAG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTGCGAGTGAAGAGGGCTaGGCATTTCCATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIASEEG*AFPLAS
Trigger: TGATGCCAATGGAAATGCCCAGCCCTCTTCACTCGC...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCCACTTCTGTAGCCCTTaGCAGCGAGTGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLHFCSP*QRVKRA
Trigger: AGCCCTCTTCACTCGCTGCCAAGGGCTACAGAAGTG...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGAGGAAGTGGCATCCTaGGACTTGTCAGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGEEVAS*DLSEGR
Trigger: CCTTCCTTCTGACAAGTCCCAGGATGCCACTTCCTC...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCACTATTACCTCCGGCTaGGCTGCACTGGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLTITSG*AALEEV
Trigger: CACTTCCTCCAGTGCAGCCCAGCCGGAGGTAATAGT...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGACTATTACCTCCGGCTaGGCTGCACTGGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGTITSG*AALEEV
Trigger: CACTTCCTCCAGTGCAGCCCAGCCGGAGGTAATAGT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGAGGTGGGTTTTTCCTaGGTTGGTGCTGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEEVGFS*VGAESC
Trigger: GCAGGACTCAGCACCAACCCAGGAAAAACCCACCTC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTCTCAGTGTTCCGGAGTaGGATGCCCACTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGLSVPE*DAHFIH
Trigger: ATGGATGAAGTGGGCATCCCACTCCGGAACACTGAG...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAGGAAGCAGAGCTGGATaGTCGCTTGAGCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLGSRAG*SLEPTQ
Trigger: CTGAGTGGGCTCAAGCGACCATCCAGCTCTGCTTCC...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAATTCCCACCCGGCCGTaGTGTTCTCCTTCATACCAG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEIPTRP*CSPSYQ
Trigger: CTGGTATGAAGGAGAACACCACGGCCGGGTGGGAAT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATACTCGATGTAGGTGCGTaGGAAGATTCCCACCCGGCC +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCILDVGA*EDSHPA
Trigger: GGCCGGGTGGGAATCTTCCCACGCACCTACATCGAG...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCTGGTGTCAACTTTTTaGGCTGTGCCTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQALVSTF*AVPSQQ
Trigger: CTGCTGAGAAGGCACAGCCCAAAAAGTTGACACCAG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTAGTGGCACTGCGACTTaGGGAGGAGGAGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPISGTAT*GGGERQ
Trigger: CTGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCTCAGCCTCACTTCCTaGAAAAGCGCTACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATLSLTS*KSATQG
Trigger: CCCCTGGGTAGCGCTTTTCCAGGAAGTGAGGCTGAG...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGGTGGGAAGATGCATTaGTCCAGGAGCTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLGGKMH*SRSSGQ
Trigger: CTGCCCAGAGCTCCTGGACCAATGCATCTTCCCACC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTCAAGTCGTCTGCAACTaGGGCTCTGAACTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIQVVCN*GSELLS
Trigger: ACTGAGCAGTTCAGAGCCCCAGTTGCAGACGACTTG...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGGGGAAAGGCTGAAGTaGCTCCCAGAAGCGGCTAAG +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATGERLK*LPEAAK
Trigger: CTTAGCCGCTTCTGGGAGCCACTTCAGCCTTTCCCC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCTGGTCTTGGGCAGTGTaGGGGACTCCACCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLWSWAV*GTPPLS
Trigger: AGACAAAGGTGGAGTCCCCCACACTGCCCAAGACCA...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTCATCAGGGCAGTCAATaGCACTGCTGCACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIHQGSQ*HCCTAG
Trigger: GCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATG...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCATCAGGGCAGTCAATaGCACTGCTGCACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEHQGSQ*HCCTAG
Trigger: GCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCAGAATGAACCACAAGTaGCCTCCAGAGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLRMNHK*PPEPQG
Trigger: GCCCTGTGGCTCTGGAGGCCACTTGTGGTTCATTCT...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTAGCCACGGCAAACCCTaGGCATGTCTTGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGSHGKP*ACLAYG
Trigger: ACCATAAGCAAGACATGCCCAGGGTTTGCCGTGGCT...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCTCTCTCTTCTGATCTaGCCCCCACAAAGAACAGAC +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQALSLLI*PPQRTD
Trigger: GTCTGTTCTTTGTGGGGGCCAGATCAGAAGAGAGAG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAAAGTGAGGGTACTGTaGCTGTCTGGTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGKVRVL*LSGGGW
Trigger: CCATCCCCCACCAGACAGCCACAGTACCCTCACTTT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTTCCTGTCCAGGCTGTaGTCTGAGTATGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGFLSRL*SEYGTE
Trigger: CTCCGTGCCATACTCAGACCACAGCCTGGACAGGAA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAAGGGCCTCCTGCCGCTaGTGCTGTACTCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTRASCR*CCTPGG
Trigger: GCCTCCAGGAGTACAGCACCAGCGGCAGGAGGCCCT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAATGTTGCCGGGTTTCCTaGGGGCTCGCAGGGCTACTG +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWECCRVS*GLAGLL
Trigger: CAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACA...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACTGTTGCCGGGTTTCCTaGGGGCTCGCAGGGCTACTG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNCCRVS*GLAGLL
Trigger: CAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACA...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATACCTCCACTCATCTGCTaGAGAAGGCTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIPPLIC*RRLWLQ
Trigger: CTGGAGCCAGAGCCTTCTTCAGCAGATGAGTGGAGG...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCAGCGGAGGTGGTGGTaGGAAGGATGGTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNQRRWW*EGWWRL
Trigger: CAGACGCCACCATCCTTCTCACCACCACCTCCGCTG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAATAGCCTTGCCAGGTaGGGTGGGTTTTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAENSLAR*GGFFLG
Trigger: ACCCAGGAAAAACCCACCTCACCTGGCAAGGCTATT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR TCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTACATCGCTTAAGTCCTaGGTGCTCTTCACCACCCGC +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPITSLKS*VLFTTR
Trigger: GCGGGTGGTGAAGAGCACTCAGGACTTAAGCGATGT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAACATCGCTTAAGTCCTaGGTGCTCTTCACCACCCGC +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLTSLKS*VLFTTR
Trigger: GCGGGTGGTGAAGAGCACTCAGGACTTAAGCGATGT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCTTGTACCAGTCTTTTaGTCTCTCAGTGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQALVPVF*SLSVPE
Trigger: CTCCGGAACACTGAGAGATCAAAAGACTGGTACAAG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGCTCATCTCACTTTTTaGGCGAGGCACAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGAHLTF*ARHRKG
Trigger: CCCCTTTCTGTGCCTCGCTCAAAAAGTGAGATGAGC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGCTCATCTCACTTTTTaGGCGAGGCACAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEAHLTF*ARHRKG
Trigger: CCCCTTTCTGTGCCTCGCTCAAAAAGTGAGATGAGC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGTGTGGCCGACCTCTTaGCTACCTTCTCACCATCAA +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEVWPTS*LPSHHQ
Trigger: TTGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACAC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGTGTGGCCGACCTCTTaGCTACCTTCTCACCATCAA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGVWPTS*LPSHHQ
Trigger: TTGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACAC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATAGCCCACTCAGGCCCTaGAGAGGGATGTCACCACCT +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDSPLRP*RGMSPP
Trigger: AGGTGGTGACATCCCTCTTCAGGGCCTGAGTGGGCT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATAGCTGGATGGTCGCTTaGGCCCACTCAGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDSWMVA*AHSGPE
Trigger: TTCAGGGCCTGAGTGGGCTCAAGCGACCATCCAGCT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGATGGTGCGTCGGAATaGCGCCTGTGTGGCGTCGAG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNDGASE*RLCGVE
Trigger: CTCGACGCCACACAGGCGTCATTCCGACGCACCATC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTCAGTATCGTCTATATTaGGGAGGTCCCCAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIQYRLY*GGPQSA
Trigger: AGCGCTTTGGGGACCTCCTCAATATAGACGATACTG...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGCACCTGACCACGTCTaGAGGCTTCAAGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEAPDHV*RLQAAL
Trigger: AAGAGCTGCTTGAAGCCTTCAGACGTGGTCAGGTGC...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGACAGTACTCAGGCACCTaGCCACGTCTGAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGQYSGT*PRLKAS
Trigger: TGAAGCCTTCAGACGTGGTCAGGTGCCTGAGTACTG...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACTTCGCTGCTGGGCTTaGGGTTGCTGGCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTLRCWA*GCWLPP
Trigger: AGGTGGGAGCCAGCAACCTCAAGCCCAGCAGCGAAG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371246.6
CDS-3UTR TCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCCTGCAACTGGGGCTCTaGACTGCTCAGTGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLLQLGL*TAQWFK
Trigger: CTTAAACCACTGAGCAGTTCAGAGCCCCAGTTGCAG...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACTGCAACTGGGGCTCTaGACTGCTCAGTGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAELQLGL*TAQWFK
Trigger: CTTAAACCACTGAGCAGTTCAGAGCCCCAGTTGCAG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR TCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTAGCCTTCAGGCTCAATaGTTGAGATGGGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGSLQAQ*LRWELS
Trigger: AGAGAGCTCCCATCTCAATCATTGAGCCTGAAGGCT...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGACCTCAGCAGGTTGAGTaGGGGATTTGGTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGPQQVE*GIWSWA
Trigger: TGCCCAAGACCAAATCCCTCACTCAACCTGCTGAGG...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTAGCCACAGGGCTTCCTaGCTTCATCACTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVISHRAS*LHHSEN
Trigger: GTTTTCTGAGTGATGAAGTCAGGAAGCCCTGTGGCT...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTATCTGTGGGGGAAGATaGGAGTTTAGAGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAICGGR*EFRDSG
Trigger: TCCAGAGTCTCTAAACTCTCATCTTCCCCCACAGAT...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTTGGGGGATGGGAAGCTaGTGGGATCCTAAGATGGGT +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFWGMGS*WDPKMG
Trigger: ACCCATCTTAGGATCCCATCAGCTTCCCATCCCCCA...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGGGACTGGCCCTTGGTaGCAAGGCGAGGTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTGTGPW*QGEVVS
Trigger: ACTGACCACCTCGCCTTGTCACCAAGGGCCAGTCCC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR TCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGATGGGGTGGGACGATCTaGCCAACTCAAATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRWGGTI*PTQMGE
Trigger: CTCCCCCATTTGAGTTGGTCAGATCGTCCCACCCCA...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATTAGGTAGATGTTCCTaGGGAGGGTGCTCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAELGRCS*GGCSCP
Trigger: GGGACAAGAGCACCCTCCTCAGGAACATCTACCTAA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTTGGTCCTGCTCTCAATaGATGATGAGAAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAWSCSQ*MMRKLA
Trigger: AGCCAGCTTTCTCATCATTCATTGAGAGCAGGACCA...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAGGTTCTCACAGCTTTaGGCCTTCTCTGAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAERFSQL*AFSEGK
Trigger: CTTGCCCTCAGAGAAGGCTCAAAGCTGTGAGAACCT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACCCGTCGGGAGCGCATaGGCAGGTTCTCAATGCTCC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTPVGSA*AGSQCS
Trigger: GGAGCATTGAGAACCTGCTCATGCGCTCCCGACGGG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGCTTCCGGATGGTGGTaGAGCGGGTGTATGAGGCCG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTASGWW*SGCMRP
Trigger: CGGCCTCATACACCCGCTTCACCACCATCCGGAAGC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTCCCATTGCTGCCAGGTaGCAAGCCATTCATCACAGC +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIPIAAR*QAIHHS
Trigger: GCTGTGATGAATGGCTTGGCACCTGGCAGCAATGGG...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATGTCTTGCCCATTGCTaGCAGGTGCCAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAECLAHC*QVPSHS
Trigger: TGAATGGCTTGGCACCTGGCAGCAATGGGCAAGACA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTGTCTTGCCCATTGCTaGCAGGTGCCAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGCLAHC*QVPSHS
Trigger: TGAATGGCTTGGCACCTGGCAGCAATGGGCAAGACA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGCTCCAGACCTGGTTTaGTTTCGTGTTGCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEAPDLV*FRVAGF
Trigger: AAACCCGGCAACACGAAAGCAAACCAGGTCTGGAGC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR GCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGACGCTTAAGTCCTGAGTaGTCTTCACCACCCGCCTAC +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGRLSPE*SSPPAY
Trigger: GTAGGCGGGTGGTGAAGAGCACTCAGGACTTAAGCG...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTTGTTCCGGAGTGGGATaGCCACTTCATCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVICSGVG*PLHPWK
Trigger: TTTCCATGGATGAAGTGGGCATCCCACTCCGGAACA...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAGAAGCTCGATGTAGGTaGGTGGGAAGATTCCCACCC +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLEARCR*VGRFPP
Trigger: GGGTGGGAATCTTCCCACGCACCTACATCGAGCTTC...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGAAGCTCGATGTAGGTaGGTGGGAAGATTCCCACCC +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLEARCR*VGRFPP
Trigger: GGGTGGGAATCTTCCCACGCACCTACATCGAGCTTC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACAGTTCTCATCTACCTaGCGGAGCAGTGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEQFSST*RSSVIL
Trigger: GAGGATCACACTGCTCCGGCAGGTAGATGAGAACTG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCAGTTCTCATCTACCTaGCGGAGCAGTGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGQFSST*RSSVIL
Trigger: GAGGATCACACTGCTCCGGCAGGTAGATGAGAACTG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTAACTCTTCCAAAGGATaGCAACTCCTTGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGNSSKG*QLLAGR
Trigger: GCGACCAGCAAGGAGTTGGCATCCTTTGGAAGAGTT...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAAGGTTGCTGTGGGCTTaGAGTGGCACTGCGACTTGG +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIRLLWA*SGTATW
Trigger: CCAAGTCGCAGTGCCACTGCAAGCCCACAGCAACCT...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306402.10
ENST00000371249.6
CDS-3UTR GCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGGCTGGGGGTCTTGTTaGATTCTTGGGCTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLGWGSC*ILGLEA
Trigger: GGCTTCAAGCCCAAGAATGCAACAAGACCCCCAGCC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAAGGAGTTTGGGGCTTaGCTTTACCCGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGKEFGA*LYPEAW
Trigger: CCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGAGGACAGGGCCTCCTaGCGCTGGTGCTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTEDRAS*RWCCTP
Trigger: AGGAGTACAGCACCAGCGGCAGGAGGCCCTGTCCTC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAATCTCCATGAACACTaGCGCCACTGCCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAENLHEH*RHCLLC
Trigger: GCAGAGAAGGCAGTGGCGGCAGTGTTCATGGAGATT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTGTCTAGAGGTCTGCTaGTGCTCATGCTTCCGGATG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGCLEVC*CSCFRM
Trigger: CATCCGGAAGCATGAGCAGCAGCAGACCTCTAGACA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCACTTCTGTAGCCCTTaGCAGCGAGTGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLHFCSP*QRVKRA
Trigger: AGCCCTCTTCACTCGCTGCCAAGGGCTACAGAAGTG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGAGGAAGTGGCATCCTaGGACTTGTCAGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEEEVAS*DLSEGR
Trigger: CCTTCCTTCTGACAAGTCCCAGGATGCCACTTCCTC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCTGCACTGGAGGAAGTaGCATCCTGGGACTTGTCAG +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATLHWRK*HPGTCQ
Trigger: CTGACAAGTCCCAGGATGCCACTTCCTCCAGTGCAG...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCTGCACTGGAGGAAGTaGCATCCTGGGACTTGTCAG +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVELHWRK*HPGTCQ
Trigger: CTGACAAGTCCCAGGATGCCACTTCCTCCAGTGCAG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTAAGGATGGTGGCGTCTaGCTAATGGGGGCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIKDGGV*LMGAKE
Trigger: CTCCTTTGCCCCCATTAGCCAGACGCCACCATCCTT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAAAGGATGGTGGCGTCTaGCTAATGGGGGCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLKDGGV*LMGAKE
Trigger: CTCCTTTGCCCCCATTAGCCAGACGCCACCATCCTT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGAGGTGGGTTTTTCCTaGGTTGGTGCTGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLEVGFS*VGAESC
Trigger: GCAGGACTCAGCACCAACCCAGGAAAAACCCACCTC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTGAGGTGGGTTTTTCCTaGGTTGGTGCTGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFEVGFS*VGAESC
Trigger: GCAGGACTCAGCACCAACCCAGGAAAAACCCACCTC...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCCTTGCCAGGTGAGGTaGGTTTTTCCTGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEPCQVR*VFPGLV
Trigger: CACCAACCCAGGAAAAACCCACCTCACCTGGCAAGG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTACCTTGCCAGGTGAGGTaGGTTTTTCCTGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLPCQVR*VFPGLV
Trigger: CACCAACCCAGGAAAAACCCACCTCACCTGGCAAGG...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCTCAGTGTTCCGGAGTaGGATGCCCACTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGLSVPE*DAHFIH
Trigger: ATGGATGAAGTGGGCATCCCACTCCGGAACACTGAG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACTCAGTGTTCCGGAGTaGGATGCCCACTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAELSVPE*DAHFIH
Trigger: ATGGATGAAGTGGGCATCCCACTCCGGAACACTGAG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTATTCCCACCCGGCCGTaGTGTTCTCCTTCATACCAG +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATIPTRP*CSPSYQ
Trigger: CTGGTATGAAGGAGAACACCACGGCCGGGTGGGAAT...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAATTCCCACCCGGCCGTaGTGTTCTCCTTCATACCAG +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGIPTRP*CSPSYQ
Trigger: CTGGTATGAAGGAGAACACCACGGCCGGGTGGGAAT...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
CDS-3UTR CCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAAGTGGCACTGCGACTTaGGGAGGAGGAGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRSGTAT*GGGERQ
Trigger: CTGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACT...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCGCTGTGGGCTTGCAGTaGCACTGCGACTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLAVGLQ*HCDLGR
Trigger: CCTCCCCAAGTCGCAGTGCCACTGCAAGCCCACAGC...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGCTGTGGGCTTGCAGTaGCACTGCGACTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTAVGLQ*HCDLGR
Trigger: CCTCCCCAAGTCGCAGTGCCACTGCAAGCCCACAGC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACAAGTCGTCTGCAACTaGGGCTCTGAACTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEQVVCN*GSELLS
Trigger: ACTGAGCAGTTCAGAGCCCCAGTTGCAGACGACTTG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTTGGTCTTGGGCAGTGTaGGGGACTCCACCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIWSWAV*GTPPLS
Trigger: AGACAAAGGTGGAGTCCCCCACACTGCCCAAGACCA...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTATGGTCTTGGGCAGTGTaGGGGACTCCACCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLWSWAV*GTPPLS
Trigger: AGACAAAGGTGGAGTCCCCCACACTGCCCAAGACCA...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAGCCACGGCAAACCCTaGGCATGTCTTGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAESHGKP*ACLAYG
Trigger: ACCATAAGCAAGACATGCCCAGGGTTTGCCGTGGCT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTCTCTCTCTTCTGATCTaGCCCCCACAAAGAACAGAC +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVILSLLI*PPQRTD
Trigger: GTCTGTTCTTTGTGGGGGCCAGATCAGAAGAGAGAG...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCCTGAAGATGGCGTGTaGACACCACCGTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLPEDGV*TPPSPF
Trigger: GAATGGAGACGGTGGTGTCCACACGCCATCTTCAGG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR CCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAACTCTCTTCGCGCCATaGCTGCCTCTTGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCITLFAP*LPLALA
Trigger: AGCCAGAGCAAGAGGCAGCCATGGCGCGAAGAGAGT...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACAGTCCTCCAGGGCCGTaGGTCTCTCCTGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNSPPGP*VSPERA
Trigger: AGCCCTCTCAGGAGAGACCCACGGCCCTGGAGGACT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGACTCCTGGAGGCTCATaGTACTGCTCGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGTPGGS*YCSTCC
Trigger: ACAGCAAGTCGAGCAGTACCATGAGCCTCCAGGAGT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGGACAGGTCCAGGGATaGCATGGAACGGGACCGCTG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTGQVQG*HGTGPL
Trigger: CAGCGGTCCCGTTCCATGCCATCCCTGGACCTGTCC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGCAGATGAGGGGGAATaGAATCATCTAGAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEADEGE*NHLESG
Trigger: TCCCGACTCTAGATGATTTCATTCCCCCTCATCTGC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTGCTCATCTCACTTTTTaGGCGAGGCACAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFAHLTF*ARHRKG
Trigger: CCCCTTTCTGTGCCTCGCTCAAAAAGTGAGATGAGC...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTGTGTGGCCGACCTCTTaGCTACCTTCTCACCATCAA +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIVWPTS*LPSHHQ
Trigger: TTGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACAC...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGTGTGGCCGACCTCTTaGCTACCTTCTCACCATCAA +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATVWPTS*LPSHHQ
Trigger: TTGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACAC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACCCAGGAGCCCCGTCTaGTTCCCTCTTCACTGCATG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTPRSPV*FPLHCM
Trigger: CATGCAGTGAAGAGGGAATCAGACGGGGCTCCTGGG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAAGCCCACTCAGGCCCTaGAGAGGGATGTCACCACCT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTSPLRP*RGMSPP
Trigger: AGGTGGTGACATCCCTCTTCAGGGCCTGAGTGGGCT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACAGTATCGTCTATATTaGGGAGGTCCCCAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEQYRLY*GGPQSA
Trigger: AGCGCTTTGGGGACCTCCTCAATATAGACGATACTG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGGCAGGTCTCATCTCTaGCCCAGATTTCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEGRSHL*PRFPFC
Trigger: GCAAAAAGGAAATCTGGGTCAGAGATGAGACCTGCC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGGCAGGTCTCATCTCTaGCCCAGATTTCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGGRSHL*PRFPFC
Trigger: GCAAAAAGGAAATCTGGGTCAGAGATGAGACCTGCC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTTCCTCTCACCCTTTCTaGAGGACATTTCTACTTGTG +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQASSHPF*RTFLLV
Trigger: CACAAGTAGAAATGTCCTTCAGAAAGGGTGAGAGGA...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCGACTCCTGTCGGGGGTaGCTCTTCGCTGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSDSCRG*LFAAGL
Trigger: AAGCCCAGCAGCGAAGAGTCACCCCCGACAGGAGTC...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAGACTCCTGTCGGGGGTaGCTCTTCGCTGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQDSCRG*LFAAGL
Trigger: AAGCCCAGCAGCGAAGAGTCACCCCCGACAGGAGTC...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCTGCAACTGGGGCTCTaGACTGCTCAGTGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLLQLGL*TAQWFK
Trigger: CTTAAACCACTGAGCAGTTCAGAGCCCCAGTTGCAG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTCTGCAACTGGGGCTCTaGACTGCTCAGTGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFLQLGL*TAQWFK
Trigger: CTTAAACCACTGAGCAGTTCAGAGCCCCAGTTGCAG...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGGGAGAGTACAGATCTaGATCATCATCTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAGRVQI*IIISVQ
Trigger: CTGAACAGAGATGATGATTCAGATCTGTACTCTCCC...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371249.6
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCTTCGCTGCTGGGCTTaGGGTTGCTGTGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNLRCWA*GCCGLA
Trigger: TGCAAGCCCACAGCAACCTCAAGCCCAGCAGCGAAG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGACTTGGTAGCTCAGACTaGCCTCCAGCAGCGTTACAG +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRLGSSD*PPAALQ
Trigger: CTGTAACGCTGCTGGAGGTCAGTCTGAGCTACCAAG...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGTGTGCGTTTCTCTCTaGACATCAGGGCAGTCAATG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEVCVSL*TSGQSM
Trigger: CATTGACTGCCCTGATGTTCAGAGAGAAACGCACAC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAGCCACAGGGCTTCCTaGCTTCATCACTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAESHRAS*LHHSEN
Trigger: GTTTTCTGAGTGATGAAGTCAGGAAGCCCTGTGGCT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATAATTGGACAGAGTTGTaGCCAAGCAGCCCGGGCGTC +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDNWTEL*PSSPGV
Trigger: GACGCCCGGGCTGCTTGGTCACAACTCTGTCCAATT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATCTCCCCAATCACCTCTaGGTTTCTGGTGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDLPNHL*VSGGQG
Trigger: TCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAG...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAACAATAGGGAGAAAGTaGGGGTACTGTGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAETIGRK*GYCGCL
Trigger: CAGACAGCCACAGTACCCTCACTTTCTCCCTATTGT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTAGACGGGCAAATTGGTaGGGCATACCTGAATTTCTG +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIRRANW*GIPEFL
Trigger: CAGAAATTCAGGTATGCCTCACCAATTTGCCCGTCT...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGCTTTGAGCCTTCTCTaGGGGCAAGAGGATACTCTT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEALSLL*GQEDTL
Trigger: AAGAGTATCCTCTTGCCCTCAGAGAAGGCTCAAAGC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGTCAGTGGAGATATTTaGACAGCGGTCCACGTCATC +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGVSGDI*TAVHVI
Trigger: GATGACGTGGACCGCTGTTCAAATATCTCCACTGAC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTGCCCTTGCACTTGTTaGGGCGATGTTTGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGCPCTC*GDVWGN
Trigger: ATTTCCCCAAACATCGCCTCAACAAGTGCAAGGGCA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATACCCATTGCTGCCAGGTaGCAAGCCATTCATCACAGC +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIPIAAR*QAIHHS
Trigger: GCTGTGATGAATGGCTTGGCACCTGGCAGCAATGGG...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGATGTCTTGCCCATTGCTaGCAGGTGCCAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGCLAHC*QVPSHS
Trigger: TGAATGGCTTGGCACCTGGCAGCAATGGGCAAGACA...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGTGTCTTGCCCATTGCTaGCAGGTGCCAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVECLAHC*QVPSHS
Trigger: TGAATGGCTTGGCACCTGGCAGCAATGGGCAAGACA...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGCTCCAGACCTGGTTTaGTTTCGTGTTGCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEAPDLV*FRVAGF
Trigger: AAACCCGGCAACACGAAAGCAAACCAGGTCTGGAGC...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTGTTCCGGAGTGGGATaGCCACTTCATCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGCSGVG*PLHPWK
Trigger: TTTCCATGGATGAAGTGGGCATCCCACTCCGGAACA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR GCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTGCTCTGTGGCACGTTTaGACTGGGTGCTTTATTAAG +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIALWHV*TGCFIK
Trigger: CTTAATAAAGCACCCAGTGCAAACGTGCCACAGAGC...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR GCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCTGTGTGGCGTCGAGCTaGAATATCAGCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLCVASS*NISLFL
Trigger: CAAGAAGAGGCTGATATTGCAGCTCGACGCCACACA...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR GCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCAGTTCTCATCTACCTaGCGGAGCAGTGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLQFSST*RSSVIL
Trigger: GAGGATCACACTGCTCCGGCAGGTAGATGAGAACTG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCAGTTCTCATCTACCTaGCGGAGCAGTGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEQFSST*RSSVIL
Trigger: GAGGATCACACTGCTCCGGCAGGTAGATGAGAACTG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCGGCTTGCAGTGGCACTaGGACTTGGGGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLGLQWH*DLGRRR
Trigger: TCTCCTCCTCCCCAAGTCGCAGTGCCACTGCAAGCC...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGGCTTGCAGTGGCACTaGGACTTGGGGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNGLQWH*DLGRRR
Trigger: TCTCCTCCTCCCCAAGTCGCAGTGCCACTGCAAGCC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCAACTCTTCCAAAGGATaGCAACTCCTTGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLNSSKG*QLLAGR
Trigger: GCGACCAGCAAGGAGTTGGCATCCTTTGGAAGAGTT...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTGCTGAATGCATCAGGTaGCTCAGTTTTGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIAECIR*LSFASV
Trigger: AACAGAGGCAAAACTGAGGCACCTGATGCATTCAGC...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTATCTGCTTGGCCATCTaGTCCCCAATTCTCATGGGC +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFICLAI*SPILMG
Trigger: GCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGAT...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCAATCGGTGAAATGCTaGCGTGCAAATTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGQSVKC*RANCTC
Trigger: GCACGTGCAATTTGCACGGCAGCATTTCACCGATTG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGAAGGAGTTTGGGGCTTaGCTTTACCCGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEKEFGA*LYPEAW
Trigger: CCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAAGGATTTCCGAAATaGAGGCCTTCGCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGEGFPK*RPSQLT
Trigger: TGTCAGCTGCGAAGGCCTGCATTTCGGAAATCCTTC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCAGAACTCATGGTGGTaGCAGGACAAGTCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLQNSWW*QDKSSA
Trigger: TGCAGACGACTTGTCCTGCCACCACCATGAGTTCTG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCAGAACTCATGGTGGTaGCAGGACAAGTCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEQNSWW*QDKSSA
Trigger: TGCAGACGACTTGTCCTGCCACCACCATGAGTTCTG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTATTCAGAACTCATGGTaGTGGCAGGACAAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIIQNSW*WQDKSS
Trigger: AGACGACTTGTCCTGCCACCACCATGAGTTCTGAAT...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCCACATTCAGAACTCATaGTGGTGGCAGGACAAGTCG +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLHIQNS*WWQDKS
Trigger: CGACTTGTCCTGCCACCACCATGAGTTCTGAATGTG...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACACATTCAGAACTCATaGTGGTGGCAGGACAAGTCG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEHIQNS*WWQDKS
Trigger: CGACTTGTCCTGCCACCACCATGAGTTCTGAATGTG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTGCGAGTGAAGAGGGCTaGGCATTTCCATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFASEEG*AFPLAS
Trigger: TGATGCCAATGGAAATGCCCAGCCCTCTTCACTCGC...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGCGAGTGAAGAGGGCTaGGCATTTCCATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLASEEG*AFPLAS
Trigger: TGATGCCAATGGAAATGCCCAGCCCTCTTCACTCGC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGAGGAAGTGGCATCCTaGGACTTGTCAGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATEEVAS*DLSEGR
Trigger: CCTTCCTTCTGACAAGTCCCAGGATGCCACTTCCTC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTCTCAGTGTTCCGGAGTaGGATGCCCACTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFLSVPE*DAHFIH
Trigger: ATGGATGAAGTGGGCATCCCACTCCGGAACACTGAG...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTACTCAGTGTTCCGGAGTaGGATGCCCACTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLLSVPE*DAHFIH
Trigger: ATGGATGAAGTGGGCATCCCACTCCGGAACACTGAG...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAATGACGCCTGTGTaGCGTCGAGCTGCAATATCA +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEGMTPV*RRAAIS
Trigger: TGATATTGCAGCTCGACGCCACACAGGCGTCATTCC...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000634504.1
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCTCGATGTAGGTGCGTaGGAAGATTCCCACCCGGCC +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNLDVGA*EDSHPA
Trigger: GGCCGGGTGGGAATCTTCCCACGCACCTACATCGAG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATAGTGGCACTGCGACTTaGGGAGGAGGAGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDSGTAT*GGGERQ
Trigger: CTGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTCTCAGTGGTTTAAGGTaGTGGGAAGATGCATTGGTC +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGLSGLR*WEDALV
Trigger: GACCAATGCATCTTCCCACCACCTTAAACCACTGAG...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCAAGTCGTCTGCAACTaGGGCTCTGAACTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLQVVCN*GSELLS
Trigger: ACTGAGCAGTTCAGAGCCCCAGTTGCAGACGACTTG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAGAGGACTGGAATCCTaGGACTTGTCAGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGRGLES*DLSEGR
Trigger: CCTTCCTTCTGACAAGTCCCAGGATTCCAGTCCTCT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306402.10
ENST00000607232.5
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGGCTTGAGGTTGCTGTaGGCTTGCAGTGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNGLRLL*ACSGTA
Trigger: CGCAGTGCCACTGCAAGCCCACAGCAACCTCAAGCC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGGCTTGAGGTTGCTGTaGGCTTGCAGTGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTGLRLL*ACSGTA
Trigger: CGCAGTGCCACTGCAAGCCCACAGCAACCTCAAGCC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGAGCCACGGCAAACCCTaGGCATGTCTTGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVESHGKP*ACLAYG
Trigger: ACCATAAGCAAGACATGCCCAGGGTTTGCCGTGGCT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTAGCCACGGCAAACCCTaGGCATGTCTTGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATSHGKP*ACLAYG
Trigger: ACCATAAGCAAGACATGCCCAGGGTTTGCCGTGGCT...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCAAAGAACAGACGTCCTaGTTGCTGCTGGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLKEQTS*LLLVVA
Trigger: TGCCACTACCAGCAGCAACCAGGACGTCTGTTCTTT...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCCCTCTGAGTTTCTGGTaGGCAGGGAATGGGTCATTT +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLPLSFW*AGNGSF
Trigger: AAATGACCCATTCCCTGCCCACCAGAAACTCAGAGG...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAAAAGTGAGGGTACTGTaGCTGTCTGGTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIKVRVL*LSGGGW
Trigger: CCATCCCCCACCAGACAGCCACAGTACCCTCACTTT...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTAGTGCTCTTAGATGGTaGAGCAGACCTTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQASALRW*SRPSKT
Trigger: TGTTTTGGAAGGTCTGCTCCACCATCTAAGAGCACT...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTAACAGTGCTCTTAGATaGTGGAGCAGACCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQANSALR*WSRPSK
Trigger: TTTGGAAGGTCTGCTCCACCATCTAAGAGCACTGTT...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGATAGATAGAAGCCTCTaGCAGAGGAGGCAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEIDRSL*QRRQGW
Trigger: CCACCCTTGCCTCCTCTGCCAGAGGCTTCTATCTAT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAGGCTGCCTCTTGCTCTaGCTGCTAAAGGCATCACTA +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLGCLLL*LLKASL
Trigger: TAGTGATGCCTTTAGCAGCCAGAGCAAGAGGCAGCC...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGGCCCAGCTCACCCCTaGACAATGCCAGGCTACTCT +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNGPAHP*TMPGYS
Trigger: AGAGTAGCCTGGCATTGTCCAGGGGTGAGCTGGGCC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCCTTGGGATGGAGCTTaGTTGACTCAAGTAGGGACT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGPWDGA*LTQVGT
Trigger: AGTCCCTACTTGAGTCAACCAAGCTCCATCCCAAGG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATCCCATCCATCTCCTTaGGATGGAGCTTGGTTGACT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAESHPSP*DGAWLT
Trigger: AGTCAACCAAGCTCCATCCCAAGGAGATGGATGGGA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
3UTR CAA 72 bp CTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTaGTGTGCGTTTCTCTCTGAACATCAGGGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: LGHLLPNSHGQT*CAFLSEHQGSQ
Trigger: TTGACTGCCCTGATGTTCAGAGAGAAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCCTCCACTCATCTGCTaGAGAAGGCTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNPPLIC*RRLWLQ
Trigger: CTGGAGCCAGAGCCTTCTTCAGCAGATGAGTGGAGG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACCTCCACTCATCTGCTaGAGAAGGCTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTPPLIC*RRLWLQ
Trigger: CTGGAGCCAGAGCCTTCTTCAGCAGATGAGTGGAGG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGCAGATGAGGGGGAATaGAATCATCTAGAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATADEGE*NHLESG
Trigger: TCCCGACTCTAGATGATTTCATTCCCCCTCATCTGC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAAATAGCCTTGCCAGGTaGGGTGGGTTTTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCINSLAR*GGFFLG
Trigger: ACCCAGGAAAAACCCACCTCACCTGGCAAGGCTATT...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATACATCGCTTAAGTCCTaGGTGCTCTTCACCACCCGC +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDTSLKS*VLFTTR
Trigger: GCGGGTGGTGAAGAGCACTCAGGACTTAAGCGATGT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACTTGTACCAGTCTTTTaGTCTCTCAGTGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAELVPVF*SLSVPE
Trigger: CTCCGGAACACTGAGAGATCAAAAGACTGGTACAAG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGGGAGAGTACAGATCTaGATCATCATCTGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLGRVQI*IIICSP
Trigger: GGGACTGCAGATGATGATTCAGATCTGTACTCTCCC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371246.6
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCAGCCCACTCAGGCCCTaGAGAGGGATGTCACCACCT +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSSPLRP*RGMSPP
Trigger: AGGTGGTGACATCCCTCTTCAGGGCCTGAGTGGGCT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAAGCTGGATGGTCGCTTaGGCCCACTCAGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQSWMVA*AHSGPE
Trigger: TTCAGGGCCTGAGTGGGCTCAAGCGACCATCCAGCT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAGATGGTGCGTCGGAATaGCGCCTGTGTGGCGTCGAG +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDADGASE*RLCGVE
Trigger: CTCGACGCCACACAGGCGTCATTCCGACGCACCATC...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTCAGTATCGTCTATATTaGGGAGGTCCCCAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIQYRLY*GGPQSA
Trigger: AGCGCTTTGGGGACCTCCTCAATATAGACGATACTG...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAGGCAGGTCTCATCTCTaGCCCAGATTTCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLGRSHL*PRFPFC
Trigger: GCAAAAAGGAAATCTGGGTCAGAGATGAGACCTGCC...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTGGCAGGTCTCATCTCTaGCCCAGATTTCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFGRSHL*PRFPFC
Trigger: GCAAAAAGGAAATCTGGGTCAGAGATGAGACCTGCC...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTAGCCTTCAGGCTCAATaGTTGAGATGGGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPISLQAQ*LRWELS
Trigger: AGAGAGCTCCCATCTCAATCATTGAGCCTGAAGGCT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATCCTCAGCAGGTTGAGTaGGGGATTTGGTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDPQQVE*GIWSWA
Trigger: TGCCCAAGACCAAATCCCTCACTCAACCTGCTGAGG...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGTGTGCGTTTCTCTCTaGACATCAGGGCAGTCAATG +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGVCVSL*TSGQSM
Trigger: CATTGACTGCCCTGATGTTCAGAGAGAAACGCACAC...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTAGCCACAGGGCTTCCTaGCTTCATCACTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFSHRAS*LHHSEN
Trigger: GTTTTCTGAGTGATGAAGTCAGGAAGCCCTGTGGCT...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAAGCCACAGGGCTTCCTaGCTTCATCACTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLSHRAS*LHHSEN
Trigger: GTTTTCTGAGTGATGAAGTCAGGAAGCCCTGTGGCT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGATATGGGAAAAGAATaGACCACAAGTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEDMGKE*TTSGLQ
Trigger: CTGGAGGCCACTTGTGGTTCATTCTTTTCCCATATC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAAATTGGACAGAGTTGTaGCCAAGCAGCCCGGGCGTC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTNWTEL*PSSPGV
Trigger: GACGCCCGGGCTGCTTGGTCACAACTCTGTCCAATT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACAATTGGACAGAGTTGTaGCCAAGCAGCCCGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNNWTEL*PSSPGV
Trigger: GACGCCCGGGCTGCTTGGTCACAACTCTGTCCAATT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTCTGAGGCACAGGCATTaGAAACAAATTTTGCCTACC +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGLRHRH*KQILPT
Trigger: GGTAGGCAAAATTTGTTTTCAATGCCTGTGCCTCAG...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCACAGTCCACAATCGGTaGAATGCTGCCGTGCAAATT +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLTVHNR*NAAVQI
Trigger: AATTTGCACGGCAGCATTTCACCGATTGTGGACTGT...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGACAGTCCACAATCGGTaGAATGCTGCCGTGCAAATT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGTVHNR*NAAVQI
Trigger: AATTTGCACGGCAGCATTTCACCGATTGTGGACTGT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAACAGTCCACAATCGGTaGAATGCTGCCGTGCAAATT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAETVHNR*NAAVQI
Trigger: AATTTGCACGGCAGCATTTCACCGATTGTGGACTGT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCAGACGGGCAAATTGGTaGGGCATACCTGAATTTCTG +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLRRANW*GIPEFL
Trigger: CAGAAATTCAGGTATGCCTCACCAATTTGCCCGTCT...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACAGTGGAGAAGCTACTaGTCGTGGGGTGGGACGATC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTQWRSY*SWGGTI
Trigger: GATCGTCCCACCCCACGATCAGTAGCTTCTCCACTG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR GCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCGGCTCGCAGGGCTACTaGTTGGGGTTTCCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSGSQGY*LGFPCR
Trigger: CCTACAGGGAAACCCCAAGCAGTAGCCCTGCGAGCC...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTATGTTCCGGAGTGGGATaGCCACTTCATCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLCSGVG*PLHPWK
Trigger: TTTCCATGGATGAAGTGGGCATCCCACTCCGGAACA...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTCACGTTTGCACTGGGTaGTTTATTAAGCGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGHVCTG*FIKRLH
Trigger: ATGGAGACGCTTAATAAAGCACCCAGTGCAAACGTG...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR GCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTTGTGTGGCGTCGAGCTaGAATATCAGCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATCVASS*NISLFL
Trigger: CAAGAAGAGGCTGATATTGCAGCTCGACGCCACACA...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR GCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGATGTGTGGCGTCGAGCTaGAATATCAGCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGCVASS*NISLFL
Trigger: CAAGAAGAGGCTGATATTGCAGCTCGACGCCACACA...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000634504.1
CDS-3UTR GCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGACAGTTCTCATCTACCTaGCGGAGCAGTGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRQFSST*RSSVIL
Trigger: GAGGATCACACTGCTCCGGCAGGTAGATGAGAACTG...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGAACTCTTCCAAAGGATaGCAACTCCTTGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVENSSKG*QLLAGR
Trigger: GCGACCAGCAAGGAGTTGGCATCCTTTGGAAGAGTT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTCTGCTCCTGGACTATaGTTCAGGTCAGATTACCCA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGSAPGL*FRSDYP
Trigger: TGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGCACAGCAGGCTGAATaGATCAGGTGCCTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLAQQAE*IRCLSF
Trigger: AAAACTGAGGCACCTGATGCATTCAGCCTGCTGTGC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGCACAGCAGGCTGAATaGATCAGGTGCCTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATAQQAE*IRCLSF
Trigger: AAAACTGAGGCACCTGATGCATTCAGCCTGCTGTGC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAATCTGCTTGGCCATCTaGTCCCCAATTCTCATGGGC +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRICLAI*SPILMG
Trigger: GCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGAT...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTCAATCGGTGAAATGCTaGCGTGCAAATTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIQSVKC*RANCTC
Trigger: GCACGTGCAATTTGCACGGCAGCATTTCACCGATTG...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTCAATCGGTGAAATGCTaGCGTGCAAATTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFQSVKC*RANCTC
Trigger: GCACGTGCAATTTGCACGGCAGCATTTCACCGATTG...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCCACAATCGGTGAAATaGTGCCGTGCAAATTGCACG +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEPQSVK*CRANCT
Trigger: CGTGCAATTTGCACGGCAGCATTTCACCGATTGTGG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCCACAATCGGTGAAATaGTGCCGTGCAAATTGCACG +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLPQSVK*CRANCT
Trigger: CGTGCAATTTGCACGGCAGCATTTCACCGATTGTGG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTCCACAATCGGTGAAATaGTGCCGTGCAAATTGCACG +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFPQSVK*CRANCT
Trigger: CGTGCAATTTGCACGGCAGCATTTCACCGATTGTGG...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGGAGGCTCATGGTACTaGTCGACTTGCTGTCATAAT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGGGSWY*STCCHN
Trigger: ATTATGACAGCAAGTCGAGCAGTACCATGAGCCTCC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCTCACCCCTGGACAATaGCAGGCTACTCTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGLTPGQ*QATLFK
Trigger: TTTGAAAAGAGTAGCCTGGCATTGTCCAGGGGTGAG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACAGGTGTGGGAGACTTaGTCAGCCTTCCGGACAGGT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTQVWET*SAFRTG
Trigger: ACCTGTCCGGAAGGCTGAGCAAGTCTCCCACACCTG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGAACACTGCCGCCACTaGCTTCTCTGCTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTEHCRH*LLCCQW
Trigger: CCACTGACAGCAGAGAAGGCAGTGGCGGCAGTGTTC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGGCTGTCTAGAGGTCTaGTGCTGCTCATGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTGCLEV*CCSCFR
Trigger: CCGGAAGCATGAGCAGCAGCAGACCTCTAGACAGCC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATACAGAACTCATGGTGGTaGCAGGACAAGTCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIQNSWW*QDKSSA
Trigger: TGCAGACGACTTGTCCTGCCACCACCATGAGTTCTG...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATCGCAGGGCTACTGCTTaGGGTTTCCCTGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDRRATA*GFPVGR
Trigger: TCTTCCTACAGGGAAACCCCAAGCAGTAGCCCTGCG...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCGCTGGGCATTTCCATTaGCATCAGCACTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLAGHFH*HQHWKK
Trigger: TTTCTTCCAGTGCTGATGCCAATGGAAATGCCCAGC...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGCTGGGCATTTCCATTaGCATCAGCACTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEAGHFH*HQHWKK
Trigger: TTTCTTCCAGTGCTGATGCCAATGGAAATGCCCAGC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCTGTCAGAAGGAAGGTTaGGATGCACACTTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLCQKEG*DAHFCS
Trigger: GCTACAGAAGTGTGCATCCCAACCTTCCTTCTGACA...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTGTCAGAAGGAAGGTTaGGATGCACACTTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGCQKEG*DAHFCS
Trigger: GCTACAGAAGTGTGCATCCCAACCTTCCTTCTGACA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGAGGTGTTGGAGGTCTaGCAGTGCCTTCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTEVLEV*QCLLAL
Trigger: GAGGGCAAGAAGGCACTGCCAGACCTCCAACACCTC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGAGGTGTTGGAGGTCTaGCAGTGCCTTCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNEVLEV*QCLLAL
Trigger: GAGGGCAAGAAGGCACTGCCAGACCTCCAACACCTC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATAAGGATGGTGGCGTCTaGCTAATGGGGGCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDKDGGV*LMGAKE
Trigger: CTCCTTTGCCCCCATTAGCCAGACGCCACCATCCTT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTTGCCCACTTCATCCATaGAAACATCGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVICPLHP*KHRLSP
Trigger: AGGACTTAAGCGATGTTTCCATGGATGAAGTGGGCA...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGTCTACTTTCTTATCTaGGGGTTCCCAGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAVYFLI*GFPVIS
Trigger: AGAAATGACTGGGAACCCCCAGATAAGAAAGTAGAC...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGGAAGCAGAGCTGGATaGTCGCTTGAGCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTGSRAG*SLEPTQ
Trigger: CTGAGTGGGCTCAAGCGACCATCCAGCTCTGCTTCC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGGAAGCAGAGCTGGATaGTCGCTTGAGCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNGSRAG*SLEPTQ
Trigger: CTGAGTGGGCTCAAGCGACCATCCAGCTCTGCTTCC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACTCGATGTAGGTGCGTaGGAAGATTCCCACCCGGCC +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQLDVGA*EDSHPA
Trigger: GGCCGGGTGGGAATCTTCCCACGCACCTACATCGAG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCTGGTGTCAACTTTTTaGGCTGTGCCTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATLVSTF*AVPSQQ
Trigger: CTGCTGAGAAGGCACAGCCCAAAAAGTTGACACCAG...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAGGGTTTTTCACCAGTaGTCGCTTGATCACATCCAC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAERVFHQ*SLDHIH
Trigger: GTGGATGTGATCAAGCGACCACTGGTGAAAAACCCT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAGGGTTTTTCACCAGTaGTCGCTTGATCACATCCAC +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGRVFHQ*SLDHIH
Trigger: GTGGATGTGATCAAGCGACCACTGGTGAAAAACCCT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCAGTGGCACTGCGACTTaGGGAGGAGGAGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLSGTAT*GGGERQ
Trigger: CTGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACT...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAAGTGGCACTGCGACTTaGGGAGGAGGAGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTSGTAT*GGGERQ
Trigger: CTGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGGTGGGAAGATGCATTaGTCCAGGAGCTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNGGKMH*SRSSGQ
Trigger: CTGCCCAGAGCTCCTGGACCAATGCATCTTCCCACC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAGGTGGGAAGATGCATTaGTCCAGGAGCTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEGGKMH*SRSSGQ
Trigger: CTGCCCAGAGCTCCTGGACCAATGCATCTTCCCACC...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGGTGGGAAGATGCATTaGTCCAGGAGCTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTGGKMH*SRSSGQ
Trigger: CTGCCCAGAGCTCCTGGACCAATGCATCTTCCCACC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACTCAGTGGTTTAAGGTaGTGGGAAGATGCATTGGTC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAELSGLR*WEDALV
Trigger: GACCAATGCATCTTCCCACCACCTTAAACCACTGAG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCGGCTTGAGGTTGCTGTaGGCTTGCAGTGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSGLRLL*ACSGTA
Trigger: CGCAGTGCCACTGCAAGCCCACAGCAACCTCAAGCC...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306402.10
ENST00000371249.6
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGGGGAAAGGCTGAAGTaGCTCCCAGAAGCGGCTAAG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNGERLK*LPEAAK
Trigger: CTTAGCCGCTTCTGGGAGCCACTTCAGCCTTTCCCC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAACATCAGGGCAGTCAATaGCACTGCTGCACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEHQGSQ*HCCTAG
Trigger: GCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATG...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTAAAGAACAGACGTCCTaGTTGCTGCTGGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIKEQTS*LLLVVA
Trigger: TGCCACTACCAGCAGCAACCAGGACGTCTGTTCTTT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTAAAGAACAGACGTCCTaGTTGCTGCTGGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLKEQTS*LLLVVA
Trigger: TGCCACTACCAGCAGCAACCAGGACGTCTGTTCTTT...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTCTCTCTCTTCTGATCTaGCCCCCACAAAGAACAGAC +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPILSLLI*PPQRTD
Trigger: GTCTGTTCTTTGTGGGGGCCAGATCAGAAGAGAGAG...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCTCTCTCTTCTGATCTaGCCCCCACAAAGAACAGAC +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVELSLLI*PPQRTD
Trigger: GTCTGTTCTTTGTGGGGGCCAGATCAGAAGAGAGAG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCCTCTGAGTTTCTGGTaGGCAGGGAATGGGTCATTT +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEPLSFW*AGNGSF
Trigger: AAATGACCCATTCCCTGCCCACCAGAAACTCAGAGG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTACCTCTGAGTTTCTGGTaGGCAGGGAATGGGTCATTT +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLPLSFW*AGNGSF
Trigger: AAATGACCCATTCCCTGCCCACCAGAAACTCAGAGG...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTGATGGGATCCTAAGATaGGTATTTGTGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIDGILR*VFVTAA
Trigger: AGCTGCTGTCACAAATACCCATCTTAGGATCCCATC...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGATGGGATCCTAAGATaGGTATTTGTGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGDGILR*VFVTAA
Trigger: AGCTGCTGTCACAAATACCCATCTTAGGATCCCATC...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTAAGGCATCACTAAGCTaGGAGATGACACTATCAGAG +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGKASLS*EMTLSE
Trigger: CTCTGATAGTGTCATCTCCCAGCTTAGTGATGCCTT...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCCTGCAAAAGAGCGCTaGGAGCAGAGAGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNPAKER*EQRAWV
Trigger: AACCCAGGCTCTCTGCTCCCAGCGCTCTTTTGCAGG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGGTCCAGGGATGGCATaGAACGGGACCGCTGAATCA +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTGPGMA*NGTAES
Trigger: TGATTCAGCGGTCCCGTTCCATGCCATCCCTGGACC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATCCATCTCCTTGGGATaGAGCTTGGTTGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAESISLG*SLVDSS
Trigger: ACTTGAGTCAACCAAGCTCCATCCCAAGGAGATGGA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACCTCCACTCATCTGCTaGAGAAGGCTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQPPLIC*RRLWLQ
Trigger: CTGGAGCCAGAGCCTTCTTCAGCAGATGAGTGGAGG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGCAGATGAGGGGGAATaGAATCATCTAGAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIADEGE*NHLESG
Trigger: TCCCGACTCTAGATGATTTCATTCCCCCTCATCTGC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGATCTGAAAGGCTACTaGGTCGTTTTTGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEDLKGY*VVFAVL
Trigger: GAGAACAGCAAAAACGACTCAGTAGCCTTTCAGATC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAACATCGCTTAAGTCCTaGGTGCTCTTCACCACCCGC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTTSLKS*VLFTTR
Trigger: GCGGGTGGTGAAGAGCACTCAGGACTTAAGCGATGT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCTTGTACCAGTCTTTTaGTCTCTCAGTGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLLVPVF*SLSVPE
Trigger: CTCCGGAACACTGAGAGATCAAAAGACTGGTACAAG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCAGTAGGGCTGATGGCTaGGCTCTGTGGCACGTTTGC +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSSRADG*ALWHVC
Trigger: GCAAACGTGCCACAGAGCTCAGCCATCAGCCCTACT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGATATCCAGGAGTCTCTaGAGAAATTTCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGISRSL*RNFRSR
Trigger: CCTACTCCGGAAATTTCTTCAGAGACTCCTGGATAT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTCCTCTCACCCTTTCTaGAGGACATTTCTACTTGTG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGSSHPF*RTFLLV
Trigger: CACAAGTAGAAATGTCCTTCAGAAAGGGTGAGAGGA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATCCTCTCACCCTTTCTaGAGGACATTTCTACTTGTG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAESSHPF*RTFLLV
Trigger: CACAAGTAGAAATGTCCTTCAGAAAGGGTGAGAGGA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAACAGTACTCAGGCACCTaGCCACGTCTGAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEQYSGT*PRLKAS
Trigger: TGAAGCCTTCAGACGTGGTCAGGTGCCTGAGTACTG...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTAGGGGTGTTGAGATCTaGGAGTCTCTGTTCAGTACT +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFRGVEI*ESLFST
Trigger: AGTACTGAACAGAGACTCTCAGATCTCAACACCCCT...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACTGCTTTGTCCTTCTTaGAGTACCAACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAELLCPS*STNKPS
Trigger: GGATGGTTTGTTGGTACTTCAAGAAGGACAAAGCAG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR TCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCCTGCTTTGTCCTTCTTaGAGTACCAACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLLLCPS*STNKPS
Trigger: GGATGGTTTGTTGGTACTTCAAGAAGGACAAAGCAG...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGGGAGAGTACAGATCTaGATCATCATCTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEGRVQI*IIISVQ
Trigger: CTGAACAGAGATGATGATTCAGATCTGTACTCTCCC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371249.6
ENST00000607232.5
CDS-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTATTCAGGCTCAATGATTaGGATGGGAGCTCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLFRLND*DGSSLR
Trigger: CCTTAGAGAGCTCCCATCTCAATCATTGAGCCTGAA...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAGATATGGGAAAAGAATaGACCACAAGTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLDMGKE*TTSGLQ
Trigger: CTGGAGGCCACTTGTGGTTCATTCTTTTCCCATATC...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCGTTTGTGTGATCCTTaGACTCCTACAGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLRLCDP*TPTGSR
Trigger: TCTACTCCCTGTAGGAGTTCAAGGATCACACAAACG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCGTTTGTGTGATCCTTaGACTCCTACAGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVERLCDP*TPTGSR
Trigger: TCTACTCCCTGTAGGAGTTCAAGGATCACACAAACG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCGCCGATAAACATCCTTaGATTGGACAGAGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLADKHP*IGQSCD
Trigger: GTCACAACTCTGTCCAATTCAAGGATGTTTATCGGC...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTATCTGTGGGGGAAGATaGGAGTTTAGAGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFICGGR*EFRDSG
Trigger: TCCAGAGTCTCTAAACTCTCATCTTCCCCCACAGAT...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTTGCTACTCCTATTTGTaGGCTTGGATGTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVICYSYL*AWMCIC
Trigger: ACAGATACACATCCAAGCTCACAAATAGGAGTAGCA...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAATTTGTGACAGCAGCTaGGGCACAGGCATTGAAAAC +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGICDSS*GTGIEN
Trigger: GTTTTCAATGCCTGTGCCTCAGCTGCTGTCACAAAT...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGACAGTCCACAATCGGTaGAATGCTGCCGTGCAAATT +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVETVHNR*NAAVQI
Trigger: AATTTGCACGGCAGCATTTCACCGATTGTGGACTGT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTAGACGGGCAAATTGGTaGGGCATACCTGAATTTCTG +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLRRANW*GIPEFL
Trigger: CAGAAATTCAGGTATGCCTCACCAATTTGCCCGTCT...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTAGACGGGCAAATTGGTaGGGCATACCTGAATTTCTG +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIRRANW*GIPEFL
Trigger: CAGAAATTCAGGTATGCCTCACCAATTTGCCCGTCT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAGTGATGAGCTTGCTGTaGCTGGAAAACTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRVMSLL*LENCGL
Trigger: AAGCCCACAGTTTTCCAGTCACAGCAAGCTCATCAC...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR TCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCCCGTCTCCATTCATGTaGAGGGAGGCCTGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLPSPFM*REAWEV
Trigger: TACTTCCCAGGCCTCCCTTCACATGAATGGAGACGG...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAATCTTGGTGGATGCCTaGAGATGGCGTGTGGACACC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTILVDA*RWRVDT
Trigger: GGTGTCCACACGCCATCTTCAGGCATCCACCAAGAT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAAGAGGCCAGATCGGTTaGTCTGGTGCATGTCCCGAT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTRGQIG*SGACPD
Trigger: ATCGGGACATGCACCAGATCAACCGATCTGGCCTCT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAATGGAACGGGACCGCTaGATCAGCTGCTCAAAAGCG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTMERDR*ISCSKA
Trigger: CGCTTTTGAGCAGCTGATTCAGCGGTCCCGTTCCAT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATGCTCCAGACCTGGTTTaGTTTCGTGTTGCCGGGTTT +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDAPDLV*FRVAGF
Trigger: AAACCCGGCAACACGAAAGCAAACCAGGTCTGGAGC...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAATTGGAGGTCTGGCAGTaGCTTCTTGCCCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWELEVWQ*LLALCQ
Trigger: CTGACAGAGGGCAAGAAGGCACTGCCAGACCTCCAA...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACATTGGAGGTCTGGCAGTaGCTTCTTGCCCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTLEVWQ*LLALCQ
Trigger: CTGACAGAGGGCAAGAAGGCACTGCCAGACCTCCAA...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACGCTTAAGTCCTGAGTaGTCTTCACCACCCGCCTAC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTRLSPE*SSPPAY
Trigger: GTAGGCGGGTGGTGAAGAGCACTCAGGACTTAAGCG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGCTGATATTCGTAAATaGTCTTGGGCTCTGCACGAT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEADIRK*SWALHD
Trigger: ATCGTGCAGAGCCCAAGAGCATTTACGAATATCAGC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGCTGATATTCGTAAATaGTCTTGGGCTCTGCACGAT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGADIRK*SWALHD
Trigger: ATCGTGCAGAGCCCAAGAGCATTTACGAATATCAGC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR GCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTTCAGAACGGAAGACTTaGCAGGCTGATATTCGTAAA +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGSERKT*QADIRK
Trigger: TTTACGAATATCAGCCTGGCAAGTCTTCCGTTCTGA...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGATATCAGCCTCTTCTTaGTCGCGTTTAAGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGISASS*SRLSRL
Trigger: GAGACGACTTAAACGCGAGCAAGAAGAGGCTGATAT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGAAGCTCGATGTAGGTaGGTGGGAAGATTCCCACCC +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNEARCR*VGRFPP
Trigger: GGGTGGGAATCTTCCCACGCACCTACATCGAGCTTC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR GCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGTCTGCTCCTGGACTATaGTTCAGGTCAGATTACCCA +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVESAPGL*FRSDYP
Trigger: TGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGA...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGATCTGCTCCTGGACTATaGTTCAGGTCAGATTACCCA +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGSAPGL*FRSDYP
Trigger: TGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGA...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGGCTGGGGGTCTTGTTaGATTCTTGGGCTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTGWGSC*ILGLEA
Trigger: GGCTTCAAGCCCAAGAATGCAACAAGACCCCCAGCC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAGCACAGCAGGCTGAATaGATCAGGTGCCTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRAQQAE*IRCLSF
Trigger: AAAACTGAGGCACCTGATGCATTCAGCCTGCTGTGC...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATATCTGCTTGGCCATCTaGTCCCCAATTCTCATGGGC +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDICLAI*SPILMG
Trigger: GCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGAT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGATCTGAAGAGAAGCCTTaGCAGGGTGTACTCAGATTC +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGSEEKP*QGVLRF
Trigger: GAATCTGAGTACACCCTGGCAAGGCTTCTCTTCAGA...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGTCTGAAGAGAAGCCTTaGCAGGGTGTACTCAGATTC +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVESEEKP*QGVLRF
Trigger: GAATCTGAGTACACCCTGGCAAGGCTTCTCTTCAGA...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTGAAATGCTGCCGTaGAAATTGCACGTGCATATG +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEGEMLP*KLHVHM
Trigger: CATATGCACGTGCAATTTGCACGGCAGCATTTCACC...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGGTGAAATGCTGCCGTaGAAATTGCACGTGCATATG +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATGEMLP*KLHVHM
Trigger: CATATGCACGTGCAATTTGCACGGCAGCATTTCACC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAGGTGAAATGCTGCCGTaGAAATTGCACGTGCATATG +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLGEMLP*KLHVHM
Trigger: CATATGCACGTGCAATTTGCACGGCAGCATTTCACC...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTGGTGAAATGCTGCCGTaGAAATTGCACGTGCATATG +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIGEMLP*KLHVHM
Trigger: CATATGCACGTGCAATTTGCACGGCAGCATTTCACC...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAATGTGTTGCAAGGCATaGCGCCAGTTAGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGMCCKA*RQLVAL
Trigger: AAGTGCAACTAACTGGCGGCATGCCTTGCAACACAT...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGGAAAACTGTGGGCTTaGAGTGGCACTGCGACTTGG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNGKLWA*SGTATW
Trigger: CCAAGTCGCAGTGCCACTGCAAGCCCACAGTTTTCC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR GCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAAGCTATCTTGGTGGATaGCTGAAGATGGCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRSYLGG*LKMACG
Trigger: TCCACACGCCATCTTCAGGCATCCACCAAGATAGCT...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCTAGAGGTCTGCTGCTaGTCATGCTTCCGGATGGTG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNLEVCC*SCFRMV
Trigger: CACCATCCGGAAGCATGAGCAGCAGCAGACCTCTAG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTCATTCATCACAGCTTTaGAACCACCATCACATTCAG +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGHSSQL*NHHHIQ
Trigger: CTGAATGTGATGGTGGTTCCAAAGCTGTGATGAATG...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAACGCAGGGCTACTGCTTaGGGTTTCCCTGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWERRATA*GFPVGR
Trigger: TCTTCCTACAGGGAAACCCCAAGCAGTAGCCCTGCG...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACGCAGGGCTACTGCTTaGGGTTTCCCTGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTRRATA*GFPVGR
Trigger: TCTTCCTACAGGGAAACCCCAAGCAGTAGCCCTGCG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCCTCTGGCTCCAGACCTaGTTTGCTTTCGTGTTGCCG +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLLWLQT*FAFVLP
Trigger: CGGCAACACGAAAGCAAACCAGGTCTGGAGCCAGAG...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACTCTGGCTCCAGACCTaGTTTGCTTTCGTGTTGCCG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTLWLQT*FAFVLP
Trigger: CGGCAACACGAAAGCAAACCAGGTCTGGAGCCAGAG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCTGGGCATTTCCATTaGCATCAGCACTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGAGHFH*HQHWKK
Trigger: TTTCTTCCAGTGCTGATGCCAATGGAAATGCCCAGC...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGCTGGGCATTTCCATTaGCATCAGCACTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLAGHFH*HQHWKK
Trigger: TTTCTTCCAGTGCTGATGCCAATGGAAATGCCCAGC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACACTTCTGTAGCCCTTaGCAGCGAGTGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTHFCSP*QRVKRA
Trigger: AGCCCTCTTCACTCGCTGCCAAGGGCTACAGAAGTG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTTGTCAGAAGGAAGGTTaGGATGCACACTTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFCQKEG*DAHFCS
Trigger: GCTACAGAAGTGTGCATCCCAACCTTCCTTCTGACA...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAACTATTACCTCCGGCTaGGCTGCACTGGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTTITSG*AALEEV
Trigger: CACTTCCTCCAGTGCAGCCCAGCCGGAGGTAATAGT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTCATTTAGTAGAGGACTaGAATCGGTACTCGAAACAG +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIHLVED*NRYSKQ
Trigger: CTGTTTCGAGTACCGATTCCAGTCCTCTACTAAATG...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTACTGATGGAAAGGCTTaGGAATCAGTTCCAATAAGG +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVITDGKA*ESVPIR
Trigger: CCTTATTGGAACTGATTCCCAAGCCTTTCCATCAGT...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGAGGTGGGTTTTTCCTaGGTTGGTGCTGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNEVGFS*VGAESC
Trigger: GCAGGACTCAGCACCAACCCAGGAAAAACCCACCTC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCCCTTGCCAGGTGAGGTaGGTTTTTCCTGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLPCQVR*VFPGLV
Trigger: CACCAACCCAGGAAAAACCCACCTCACCTGGCAAGG...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACCTTGCCAGGTGAGGTaGGTTTTTCCTGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTPCQVR*VFPGLV
Trigger: CACCAACCCAGGAAAAACCCACCTCACCTGGCAAGG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGACTCATCTTTTCGTTaGTCAGAACGGAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEDSSFR*SERKTC
Trigger: GCAAGTCTTCCGTTCTGACCAACGAAAAGATGAGTC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGACTCATCTTTTCGTTaGTCAGAACGGAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGDSSFR*SERKTC
Trigger: GCAAGTCTTCCGTTCTGACCAACGAAAAGATGAGTC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTAATCCCATATCTTTTTaGGAGGCGGTTTCCCAAACT +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGNPISF*EAVSQT
Trigger: AGTTTGGGAAACCGCCTCCCAAAAAGATATGGGATT...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGCCTCTAACTCTGTCTaGCAGAGGCTGAGATCTTTG +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIASNSV*QRLRSL
Trigger: CAAAGATCTCAGCCTCTGCCAGACAGAGTTAGAGGC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCGGAAGCAGAGCTGGATaGTCGCTTGAGCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSGSRAG*SLEPTQ
Trigger: CTGAGTGGGCTCAAGCGACCATCCAGCTCTGCTTCC...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAATTCCCACCCGGCCGTaGTGTTCTCCTTCATACCAG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTIPTRP*CSPSYQ
Trigger: CTGGTATGAAGGAGAACACCACGGCCGGGTGGGAAT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTAGGGTTTTTCACCAGTaGTCGCTTGATCACATCCAC +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIRVFHQ*SLDHIH
Trigger: GTGGATGTGATCAAGCGACCACTGGTGAAAAACCCT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTAGGGTTTTTCACCAGTaGTCGCTTGATCACATCCAC +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATRVFHQ*SLDHIH
Trigger: GTGGATGTGATCAAGCGACCACTGGTGAAAAACCCT...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAAGGGTTTTTCACCAGTaGTCGCTTGATCACATCCAC +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGRVFHQ*SLDHIH
Trigger: GTGGATGTGATCAAGCGACCACTGGTGAAAAACCCT...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACTCAGCCTCACTTCCTaGAAAAGCGCTACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQLSLTS*KSATQG
Trigger: CCCCTGGGTAGCGCTTTTCCAGGAAGTGAGGCTGAG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAACTACACGCTGCAGCTaGCCCCGCTCTGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTTTRCS*PRSVFL
Trigger: CAGAAAAACAGAGCGGGGCCAGCTGCAGCGTGTAGT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306402.10
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTCTCAGTGGTTTAAGGTaGTGGGAAGATGCATTGGTC +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPILSGLR*WEDALV
Trigger: GACCAATGCATCTTCCCACCACCTTAAACCACTGAG...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGACTCAGTGGTTTAAGGTaGTGGGAAGATGCATTGGTC +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGLSGLR*WEDALV
Trigger: GACCAATGCATCTTCCCACCACCTTAAACCACTGAG...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAAGAGGACTGGAATCCTaGGACTTGTCAGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRRGLES*DLSEGR
Trigger: CCTTCCTTCTGACAAGTCCCAGGATTCCAGTCCTCT...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306402.10
CDS-3UTR CCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCCATTTAGTAGAGGACTaGAATCCTGGGACTTGTCAG +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLHLVED*NPGTCQ
Trigger: CTGACAAGTCCCAGGATTCCAGTCCTCTACTAAATG...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306402.10
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCATTTAGTAGAGGACTaGAATCCTGGGACTTGTCAG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGHLVED*NPGTCQ
Trigger: CTGACAAGTCCCAGGATTCCAGTCCTCTACTAAATG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306402.10
ENST00000607232.5
CDS-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAATGGTCTTGGGCAGTGTaGGGGACTCCACCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEWSWAV*GTPPLS
Trigger: AGACAAAGGTGGAGTCCCCCACACTGCCCAAGACCA...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACATCAGGGCAGTCAATaGCACTGCTGCACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQHQGSQ*HCCTAG
Trigger: GCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAAAAGAACAGACGTCCTaGTTGCTGCTGGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIKEQTS*LLLVVA
Trigger: TGCCACTACCAGCAGCAACCAGGACGTCTGTTCTTT...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGACTCTCTCTTCTGATCTaGCCCCCACAAAGAACAGAC +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRLSLLI*PPQRTD
Trigger: GTCTGTTCTTTGTGGGGGCCAGATCAGAAGAGAGAG...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTTTGGGACAATGGTCCTaGGGTAATTCTGAGATATAT +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQALGQWS*GNSEIY
Trigger: ATATATCTCAGAATTACCCCAGGACCATTGTCCCAA...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAAAAGTGAGGGTACTGTaGCTGTCTGGTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEKVRVL*LSGGGW
Trigger: CCATCCCCCACCAGACAGCCACAGTACCCTCACTTT...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTAAGAAGCTATCTTGGTaGATGCCTGAAGATGGCGTG +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFKKLSW*MPEDGV
Trigger: CACGCCATCTTCAGGCATCCACCAAGATAGCTTCTT...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGGGGGAGGCCTCTTTTaGAATCATTTAAAGAACCAG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEGGGLF*NHLKNQ
Trigger: CTGGTTCTTTAAATGATTCCAAAAGAGGCCTCCCCC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACTGGTGCTGTACTCCTaGAGGCTCATGGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTLVLYS*RLMVLL
Trigger: GAGCAGTACCATGAGCCTCCAGGAGTACAGCACCAG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAAAGAGACGGTGTGCTTaGGGATGTGTTCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTKRRCA*GCVPSP
Trigger: AGGGCTCGGAACACATCCCCAAGCACACCGTCTCTT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACTGAAGCTCAAGGCATaGTGTGCCATATTGCTACAT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAELKLKA*CAILLH
Trigger: ATGTAGCAATATGGCACACCATGCCTTGAGCTTCAG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCGTCATCAGAGCAGGTaGAGAGAGGCTCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNRHQSR*REAQKA
Trigger: TGCCTTCTGAGCCTCTCTCCACCTGCTCTGATGACG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACTTCTCTGCTGTCAGTaGAGATATTTGAACAGCGGT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAELLCCQ*RYLNSG
Trigger: ACCGCTGTTCAAATATCTCCACTGACAGCAGAGAAG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
3UTR CAA 72 bp AGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATaGCTACTCCTATTTGTGAGCTTGGATGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: SQGFRTQPYHLE*LLLFVSLDVYL
Trigger: CAGATACACATCCAAGCTCACAAATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATTCGAAACAGCTCCCGTaGGGTCAGGCTCCGAGACTC +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINSKQLP*GQAPRL
Trigger: GAGTCTCGGAGCCTGACCTCACGGGAGCTGTTTCGA...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAGATCTGAAAGGCTACTaGGTCGTTTTTGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLDLKGY*VVFAVL
Trigger: GAGAACAGCAAAAACGACTCAGTAGCCTTTCAGATC...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGCTCATCTCACTTTTTaGGCGAGGCACAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTAHLTF*ARHRKG
Trigger: CCCCTTTCTGTGCCTCGCTCAAAAAGTGAGATGAGC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTATATCCAGGAGTCTCTaGAGAAATTTCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATISRSL*RNFRSR
Trigger: CCTACTCCGGAAATTTCTTCAGAGACTCCTGGATAT...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGATATCCAGGAGTCTCTaGAGAAATTTCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEISRSL*RNFRSR
Trigger: CCTACTCCGGAAATTTCTTCAGAGACTCCTGGATAT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAATGTCTTGGCGATTCTaGATCTTTAGTGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEMSWRF*IFSGSR
Trigger: TCTGCTTCCACTAAAGATTCAGAATCGCCAAGACAT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
CDS-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTTCATTAGTGATAAACTaGTGGTGCGTCGGAATGACG +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLSLVIN*WCVGMT
Trigger: CGTCATTCCGACGCACCATCAGTTTATCACTAATGA...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTTCATTAGTGATAAACTaGTGGTGCGTCGGAATGACG +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPISLVIN*WCVGMT
Trigger: CGTCATTCCGACGCACCATCAGTTTATCACTAATGA...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCTGCTTTGTCCTTCTTaGAGTACCAACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATLLCPS*STNKPS
Trigger: GGATGGTTTGTTGGTACTTCAAGAAGGACAAAGCAG...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTCTGCTTTGTCCTTCTTaGAGTACCAACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPILLCPS*STNKPS
Trigger: GGATGGTTTGTTGGTACTTCAAGAAGGACAAAGCAG...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCTGCTTTGTCCTTCTTaGAGTACCAACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVELLCPS*STNKPS
Trigger: GGATGGTTTGTTGGTACTTCAAGAAGGACAAAGCAG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCTGCAACTGGGGCTCTaGACTGCTCAGTGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNLQLGL*TAQWFK
Trigger: CTTAAACCACTGAGCAGTTCAGAGCCCCAGTTGCAG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR TCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGAGTACAGATCTaGATCATCATCTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEGRVQI*IIISVQ
Trigger: CTGAACAGAGATGATGATTCAGATCTGTACTCTCCC...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371249.6
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAAAAAGATCGGTTCATaGATGATGCTTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGKKIGS*MMLPPP
Trigger: TGGAGGAGGAAGCATCATTCATGAACCGATCTTTTT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCCCTCAGCAGGTTGAGTaGGGGATTTGGTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSPQQVE*GIWSWA
Trigger: TGCCCAAGACCAAATCCCTCACTCAACCTGCTGAGG...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATGTGTGCGTTTCTCTCTaGACATCAGGGCAGTCAATG +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDVCVSL*TSGQSM
Trigger: CATTGACTGCCCTGATGTTCAGAGAGAAACGCACAC...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTATTACTACCGTTTGTGTaGTCCTTGAACTCCTACAGG +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLLLPFV*SLNSYR
Trigger: CCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAA...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTTTACTACCGTTTGTGTaGTCCTTGAACTCCTACAGG +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLLLPFV*SLNSYR
Trigger: CCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAA...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAGGGGCCTCTCTCTTCTaGTCTGGCCCCCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAGASLF*SGPHKE
Trigger: TTCTTTGTGGGGGCCAGATCAGAAGAGAGAGGCCCC...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAGCCGATAAACATCCTTaGATTGGACAGAGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLADKHP*IGQSCD
Trigger: GTCACAACTCTGTCCAATTCAAGGATGTTTATCGGC...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATGCTACTCCTATTTGTaGGCTTGGATGTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAECYSYL*AWMCIC
Trigger: ACAGATACACATCCAAGCTCACAAATAGGAGTAGCA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTGCTACTCCTATTTGTaGGCTTGGATGTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGCYSYL*AWMCIC
Trigger: ACAGATACACATCCAAGCTCACAAATAGGAGTAGCA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCTGCTACTCCTATTTGTaGGCTTGGATGTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLCYSYL*AWMCIC
Trigger: ACAGATACACATCCAAGCTCACAAATAGGAGTAGCA...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCTGAGGCACAGGCATTaGAAACAAATTTTGCCTACC +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLLRHRH*KQILPT
Trigger: GGTAGGCAAAATTTGTTTTCAATGCCTGTGCCTCAG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTCTGAGGCACAGGCATTaGAAACAAATTTTGCCTACC +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFLRHRH*KQILPT
Trigger: GGTAGGCAAAATTTGTTTTCAATGCCTGTGCCTCAG...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGACTGAGGCACAGGCATTaGAAACAAATTTTGCCTACC +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGLRHRH*KQILPT
Trigger: GGTAGGCAAAATTTGTTTTCAATGCCTGTGCCTCAG...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTTGGCAGTTTCTTTCCTaGGAACAGGATTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIWQFLS*EQDLKE
Trigger: TTCTTTCAAATCCTGTTCTCAGGAAAGAAACTGCCA...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAACAGTCCACAATCGGTaGAATGCTGCCGTGCAAATT +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCITVHNR*NAAVQI
Trigger: AATTTGCACGGCAGCATTTCACCGATTGTGGACTGT...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTTCTTTTCAGATTCTGTaGGATCTGGTCCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATSFQIL*DLVLLS
Trigger: TGAGAGCAGGACCAGATCTCACAGAATCTGAAAAGA...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCCCGATAAAGCATGGTaGACTGCATCCCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNPDKAW*TASQPF
Trigger: GAAAGGCTGGGATGCAGTTCACCATGCTTTATCGGG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCTTGGAGGTCTGGCAGTaGCTTCTTGCCCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSLEVWQ*LLALCQ
Trigger: CTGACAGAGGGCAAGAAGGCACTGCCAGACCTCCAA...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCCTACTGAGTCGTTTTTaGTGTTCTCGATTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLLLSRF*CSRLCC
Trigger: GCAACACAATCGAGAACAGCAAAAACGACTCAGTAG...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCGTCTCTTCGGAAGTTTaGTGGATTTCAGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLVSSEV*WISGSS
Trigger: TGAACTTCCTGAAATCCAGCAAACTTCCGAAGAGAC...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371246.6
CDS-3UTR GCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGCTGATATTCGTAAATaGTCTTGGGCTCTGCACGAT +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATADIRK*SWALHD
Trigger: ATCGTGCAGAGCCCAAGAGCATTTACGAATATCAGC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTGCTGATATTCGTAAATaGTCTTGGGCTCTGCACGAT +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIADIRK*SWALHD
Trigger: ATCGTGCAGAGCCCAAGAGCATTTACGAATATCAGC...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTCAGAACGGAAGACTTaGCAGGCTGATATTCGTAAA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGSERKT*QADIRK
Trigger: TTTACGAATATCAGCCTGGCAAGTCTTCCGTTCTGA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR GCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCTCAGAACGGAAGACTTaGCAGGCTGATATTCGTAAA +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLSERKT*QADIRK
Trigger: TTTACGAATATCAGCCTGGCAAGTCTTCCGTTCTGA...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTATATCAGCCTCTTCTTaGTCGCGTTTAAGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIISASS*SRLSRL
Trigger: GAGACGACTTAAACGCGAGCAAGAAGAGGCTGATAT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR GCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATTGTGTGGCGTCGAGCTaGAATATCAGCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDCVASS*NISLFL
Trigger: CAAGAAGAGGCTGATATTGCAGCTCGACGCCACACA...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGACAATATCTCCCTTCTaGAGAGGAAGCTCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGTISPF*RGSSFS
Trigger: ACTAAAGGAGCTTCCTCTGCAGAAGGGAGATATTGT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR GCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATATCTGCTCCTGGACTATaGTTCAGGTCAGATTACCCA +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCISAPGL*FRSDYP
Trigger: TGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGA...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCGGCTGGGGGTCTTGTTaGATTCTTGGGCTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSGWGSC*ILGLEA
Trigger: GGCTTCAAGCCCAAGAATGCAACAAGACCCCCAGCC...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAGCTGAATGCATCAGGTaGCTCAGTTTTGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRAECIR*LSFASV
Trigger: AACAGAGGCAAAACTGAGGCACCTGATGCATTCAGC...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGGTGAAATGCTGCCGTaGAAATTGCACGTGCATATG +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIGEMLP*KLHVHM
Trigger: CATATGCACGTGCAATTTGCACGGCAGCATTTCACC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATCAATCGGTGAAATGCTaGCGTGCAAATTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDQSVKC*RANCTC
Trigger: GCACGTGCAATTTGCACGGCAGCATTTCACCGATTG...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATCCACAATCGGTGAAATaGTGCCGTGCAAATTGCACG +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDPQSVK*CRANCT
Trigger: CGTGCAATTTGCACGGCAGCATTTCACCGATTGTGG...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTTATATCAAAATGTGTTaGAAGGCATGCCGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIYIKMC*KACRQL
Trigger: TAACTGGCGGCATGCCTTGCAACACATTTTGATATA...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGGATCTCGATTGTGTTaGAAGAGCACAATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEGSRLC*KSTIVG
Trigger: TCCTACTATTGTGCTCTTGCAACACAATCGAGATCC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGACAGGGGCTTCTTGTaGTTACACACAGGGCCTAAC +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNDRGFL*LHTGPN
Trigger: GTTAGGCCCTGTGTGTAAGCACAAGAAGCCCCTGTC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACTGGTACTGCTCGACTTaGTGTCATAATCCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNWYCST*CHNPVG
Trigger: CCCGACGGGATTATGACAGCAAGTCGAGCAGTACCA...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACAGAACTCATGGTGGTaGCAGGACAAGTCGTCTGCA +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTQNSWW*QDKSSA
Trigger: TGCAGACGACTTGTCCTGCCACCACCATGAGTTCTG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCATTCATCACAGCTTTaGAACCACCATCACATTCAG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGHSSQL*NHHHIQ
Trigger: CTGAATGTGATGGTGGTTCCAAAGCTGTGATGAATG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGCTGGGCATTTCCATTaGCATCAGCACTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIAGHFH*HQHWKK
Trigger: TTTCTTCCAGTGCTGATGCCAATGGAAATGCCCAGC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGCGAGTGAAGAGGGCTaGGCATTTCCATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTASEEG*AFPLAS
Trigger: TGATGCCAATGGAAATGCCCAGCCCTCTTCACTCGC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGACTGATGGAAAGGCTTaGGAATCAGTTCCAATAAGG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGTDGKA*ESVPIR
Trigger: CCTTATTGGAACTGATTCCCAAGCCTTTCCATCAGT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAACTGATGGAAAGGCTTaGGAATCAGTTCCAATAAGG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAETDGKA*ESVPIR
Trigger: CCTTATTGGAACTGATTCCCAAGCCTTTCCATCAGT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAGAGGTGGGTTTTTCCTaGGTTGGTGCTGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQEVGFS*VGAESC
Trigger: GCAGGACTCAGCACCAACCCAGGAAAAACCCACCTC...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTATGCCCACTTCATCCATaGAAACATCGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLCPLHP*KHRLSP
Trigger: AGGACTTAAGCGATGTTTCCATGGATGAAGTGGGCA...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGTCTACTTTCTTATCTaGGGGTTCCCAGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGVYFLI*GFPVIS
Trigger: AGAAATGACTGGGAACCCCCAGATAAGAAAGTAGAC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTTTCCAAGTAATCAGCTaGTATAAAATGTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAFQVIS*YKMSWR
Trigger: TCGCCAAGACATTTTATACCAGCTGATTACTTGGAA...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCGTTTAAGTCGTCTCTaGTCCGCTAAAAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGRLSRL*SAKSFS
Trigger: AGAGAAACTTTTAGCGGACCAGAGACGACTTAAACG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACGTTTAAGTCGTCTCTaGTCCGCTAAAAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAERLSRL*SAKSFS
Trigger: AGAGAAACTTTTAGCGGACCAGAGACGACTTAAACG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCGGAATGACGCCTGTGTaGCGTCGAGCTGCAATATCA +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLGMTPV*RRAAIS
Trigger: TGATATTGCAGCTCGACGCCACACAGGCGTCATTCC...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGGAATGACGCCTGTGTaGCGTCGAGCTGCAATATCA +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTGMTPV*RRAAIS
Trigger: TGATATTGCAGCTCGACGCCACACAGGCGTCATTCC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGGAATGACGCCTGTGTaGCGTCGAGCTGCAATATCA +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNGMTPV*RRAAIS
Trigger: TGATATTGCAGCTCGACGCCACACAGGCGTCATTCC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAATTCCCACCCGGCCGTaGTGTTCTCCTTCATACCAG +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQIPTRP*CSPSYQ
Trigger: CTGGTATGAAGGAGAACACCACGGCCGGGTGGGAAT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTTTCCAAAACCTGCACTaGTGTCAACTTTTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLFQNLH*CQLFGL
Trigger: CAGCCCAAAAAGTTGACACCAGTGCAGGTTTTGGAA...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCCAAGTCGTCTGCAACTaGGGCTCTGAACTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLQVVCN*GSELLS
Trigger: ACTGAGCAGTTCAGAGCCCCAGTTGCAGACGACTTG...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAAGCTCATCTTTTCGTTaGTCAGAACGGAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGSSSFR*SERKTC
Trigger: GCAAGTCTTCCGTTCTGACCAACGAAAAGATGAGCT...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306402.10
ENST00000371249.6
CDS-3UTR CCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAGGGGAAAGGCTGAAGTaGCTCCCAGAAGCGGCTAAG +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAGERLK*LPEAAK
Trigger: CTTAGCCGCTTCTGGGAGCCACTTCAGCCTTTCCCC...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATCCTCTGAGTTTCTGGTaGGCAGGGAATGGGTCATTT +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDPLSFW*AGNGSF
Trigger: AAATGACCCATTCCCTGCCCACCAGAAACTCAGAGG...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTAAAGACTCTAGACTTTaGGACAATGGTCCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIKDSRL*DNGPGV
Trigger: TACCCCAGGACCATTGTCCCAAAGTCTAGAGTCTTT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTGATGGGATCCTAAGATaGGTATTTGTGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFDGILR*VFVTAA
Trigger: AGCTGCTGTCACAAATACCCATCTTAGGATCCCATC...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTGATGGGATCCTAAGATaGGTATTTGTGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIDGILR*VFVTAA
Trigger: AGCTGCTGTCACAAATACCCATCTTAGGATCCCATC...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTAAAAACAAATGTCTGTaGGAAGAGGTAACTCATTCC +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAKNKCL*EEVTHS
Trigger: GGAATGAGTTACCTCTTCCCACAGACATTTGTTTTT...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTAGTGCTCTTAGATGGTaGAGCAGACCTTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPISALRW*SRPSKT
Trigger: TGTTTTGGAAGGTCTGCTCCACCATCTAAGAGCACT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTAGTGCTCTTAGATGGTaGAGCAGACCTTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLSALRW*SRPSKT
Trigger: TGTTTTGGAAGGTCTGCTCCACCATCTAAGAGCACT...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAAACAGTGCTCTTAGATaGTGGAGCAGACCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGNSALR*WSRPSK
Trigger: TTTGGAAGGTCTGCTCCACCATCTAAGAGCACTGTT...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCGTGACTGGAAAACTGTaGGCTTGCAGTGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSVTGKL*ACSGTA
Trigger: CGCAGTGCCACTGCAAGCCCACAGTTTTCCAGTCAC...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCTACTGATCGTGGGGTaGGACGATCTGACCAACTCA +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNLLIVG*DDLTNS
Trigger: TGAGTTGGTCAGATCGTCCCACCCCACGATCAGTAG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCAATAGCCTTGCCAGGTaGGGTGGGTTTTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSNSLAR*GGFFLG
Trigger: ACCCAGGAAAAACCCACCTCACCTGGCAAGGCTATT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAAGTTTGAGGCTGCAGTaGGCTATGACTGTACCACTG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTSLRLQ*AMTVPL
Trigger: CAGTGGTACAGTCATAGCTCACTGCAGCCTCAAACT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371246.6
CDS-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAGCTCATCTCACTTTTTaGGCGAGGCACAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQAHLTF*ARHRKG
Trigger: CCCCTTTCTGTGCCTCGCTCAAAAAGTGAGATGAGC...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCGTGTGGCCGACCTCTTaGCTACCTTCTCACCATCAA +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSVWPTS*LPSHHQ
Trigger: TTGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACAC...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTATGTCTTGGCGATTCTaGATCTTTAGTGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATMSWRF*IFSGSR
Trigger: TCTGCTTCCACTAAAGATTCAGAATCGCCAAGACAT...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAACAGTATCGTCTATATTaGGGAGGTCCCCAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEQYRLY*GGPQSA
Trigger: AGCGCTTTGGGGACCTCCTCAATATAGACGATACTG...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACAGTATCGTCTATATTaGGGAGGTCCCCAAAGCGCT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTQYRLY*GGPQSA
Trigger: AGCGCTTTGGGGACCTCCTCAATATAGACGATACTG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGGCAGGTCTCATCTCTaGCCCAGATTTCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTGRSHL*PRFPFC
Trigger: GCAAAAAGGAAATCTGGGTCAGAGATGAGACCTGCC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAAAAAAGATCGGTTCATaGATGATGCTTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGKKIGS*MMLPPP
Trigger: TGGAGGAGGAAGCATCATTCATGAACCGATCTTTTT...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTAAAAAGATCGGTTCATaGATGATGCTTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATKKIGS*MMLPPP
Trigger: TGGAGGAGGAAGCATCATTCATGAACCGATCTTTTT...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCAGCCTTCAGGCTCAATaGTTGAGATGGGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLSLQAQ*LRWELS
Trigger: AGAGAGCTCCCATCTCAATCATTGAGCCTGAAGGCT...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGTGTGCGTTTCTCTCTaGACATCAGGGCAGTCAATG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNVCVSL*TSGQSM
Trigger: CATTGACTGCCCTGATGTTCAGAGAGAAACGCACAC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAGCCGATAAACATCCTTaGATTGGACAGAGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRADKHP*IGQSCD
Trigger: GTCACAACTCTGTCCAATTCAAGGATGTTTATCGGC...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGAAGTATTTCCAGCTATaGACTACCCTCAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEKYFQL*TTLRQR
Trigger: CCTTTGTCTGAGGGTAGTTCATAGCTGGAAATACTT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTAAGTATTTCCAGCTATaGACTACCCTCAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFKYFQL*TTLRQR
Trigger: CCTTTGTCTGAGGGTAGTTCATAGCTGGAAATACTT...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCATGGGGGATGGGAAGCTaGTGGGATCCTAAGATGGGT +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAWGMGS*WDPKMG
Trigger: ACCCATCTTAGGATCCCATCAGCTTCCCATCCCCCA...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTATCAAGAAGCACCCCTaGAAAAACTATGAGATAAGA +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGIKKHP*KNYEIR
Trigger: TCTTATCTCATAGTTTTTTCAGGGGTGCTTCTTGAT...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAAGATATACAAATGCGTaGGGCTGGCATCATATGCAA +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLRYTNA*GWHHMQ
Trigger: TTGCATATGATGCCAGCCTCACGCATTTGTATATCT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGAGATATACAAATGCGTaGGGCTGGCATCATATGCAA +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVERYTNA*GWHHMQ
Trigger: TTGCATATGATGCCAGCCTCACGCATTTGTATATCT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCACCCATTGCTGCCAGGTaGCAAGCCATTCATCACAGC +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAPIAAR*QAIHHS
Trigger: GCTGTGATGAATGGCTTGGCACCTGGCAGCAATGGG...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATGTTCTCGATTGTGTTaGAAGAGCACAATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAECSRLC*KSTIVG
Trigger: TCCTACTATTGTGCTCTTGCAACACAATCGAGAACA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCTGTTCTCGATTGTGTTaGAAGAGCACAATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLCSRLC*KSTIVG
Trigger: TCCTACTATTGTGCTCTTGCAACACAATCGAGAACA...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCACGCTTAAGTCCTGAGTaGTCTTCACCACCCGCCTAC +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDARLSPE*SSPPAY
Trigger: GTAGGCGGGTGGTGAAGAGCACTCAGGACTTAAGCG...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCTGTTCCGGAGTGGGATaGCCACTTCATCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLCSGVG*PLHPWK
Trigger: TTTCCATGGATGAAGTGGGCATCCCACTCCGGAACA...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACTGTTCCGGAGTGGGATaGCCACTTCATCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNCSGVG*PLHPWK
Trigger: TTTCCATGGATGAAGTGGGCATCCCACTCCGGAACA...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR GCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGAATGCTCTTGGGCTCTaGACGATATTTTCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVENALGL*TIFSCV
Trigger: GACACAAGAAAATATCGTGCAGAGCCCAAGAGCATT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
CDS-3UTR GCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAAATGCTCTTGGGCTCTaGACGATATTTTCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGNALGL*TIFSCV
Trigger: GACACAAGAAAATATCGTGCAGAGCCCAAGAGCATT...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
CDS-3UTR GCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAAATGCTCTTGGGCTCTaGACGATATTTTCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLNALGL*TIFSCV
Trigger: GACACAAGAAAATATCGTGCAGAGCCCAAGAGCATT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGCTGATATTCGTAAATaGTCTTGGGCTCTGCACGAT +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIADIRK*SWALHD
Trigger: ATCGTGCAGAGCCCAAGAGCATTTACGAATATCAGC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTTCAGAACGGAAGACTTaGCAGGCTGATATTCGTAAA +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFSERKT*QADIRK
Trigger: TTTACGAATATCAGCCTGGCAAGTCTTCCGTTCTGA...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACTGTGTGGCGTCGAGCTaGAATATCAGCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNCVASS*NISLFL
Trigger: CAAGAAGAGGCTGATATTGCAGCTCGACGCCACACA...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR GCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTACAATATCTCCCTTCTaGAGAGGAAGCTCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPITISPF*RGSSFS
Trigger: ACTAAAGGAGCTTCCTCTGCAGAAGGGAGATATTGT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTACAATATCTCCCTTCTaGAGAGGAAGCTCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFTISPF*RGSSFS
Trigger: ACTAAAGGAGCTTCCTCTGCAGAAGGGAGATATTGT...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACAACTCTTCCAAAGGATaGCAACTCCTTGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNNSSKG*QLLAGR
Trigger: GCGACCAGCAAGGAGTTGGCATCCTTTGGAAGAGTT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTCTGTCCCTGTCTTTTaGTTCTTACTTTATCCACTG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGSVPVF*FLLYPL
Trigger: CAGTGGATAAAGTAAGAAGCAAAAGACAGGGACAGA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCGCACAGCAGGCTGAATaGATCAGGTGCCTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLAQQAE*IRCLSF
Trigger: AAAACTGAGGCACCTGATGCATTCAGCCTGCTGTGC...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATTGGGATTAAGGCCCTaGTCTGTCATACTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAELGLRP*SVILKN
Trigger: GTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGTGCTGCCGTGCAAATTaGACGTGCATATGCATTTTT +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVECCRAN*TCICIF
Trigger: AAAAATGCATATGCACGTGCAATTTGCACGGCAGCA...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAAAGGAGTTTGGGGCTTaGCTTTACCCGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQKEFGA*LYPEAW
Trigger: CCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAATCTCCACGGGATGGTaGCAGTTCACTTTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTISTGW*QFTLWV
Trigger: AACCCACAAAGTGAACTGGCACCATCCCGTGGAGAT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATATTCAGAACTCATGGTaGTGGCAGGACAAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDIQNSW*WQDKSS
Trigger: AGACGACTTGTCCTGCCACCACCATGAGTTCTGAAT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAACACATTCAGAACTCATaGTGGTGGCAGGACAAGTCG +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEHIQNS*WWQDKS
Trigger: CGACTTGTCCTGCCACCACCATGAGTTCTGAATGTG...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACACATTCAGAACTCATaGTGGTGGCAGGACAAGTCG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTHIQNS*WWQDKS
Trigger: CGACTTGTCCTGCCACCACCATGAGTTCTGAATGTG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTACATTCATCACAGCTTTaGAACCACCATCACATTCAG +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLHSSQL*NHHHIQ
Trigger: CTGAATGTGATGGTGGTTCCAAAGCTGTGATGAATG...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCACACTTCTGTAGCCCTTaGCAGCGAGTGAAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAHFCSP*QRVKRA
Trigger: AGCCCTCTTCACTCGCTGCCAAGGGCTACAGAAGTG...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATGAGGTGTTGGAGGTCTaGCAGTGCCTTCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINEVLEV*QCLLAL
Trigger: GAGGGCAAGAAGGCACTGCCAGACCTCCAACACCTC...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTGTCTACTTTCTTATCTaGGGGTTCCCAGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIVYFLI*GFPVIS
Trigger: AGAAATGACTGGGAACCCCCAGATAAGAAAGTAGAC...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGATTCGTAAATGCTCTTaGGCTCTGCACGATATTTTC +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGIRKCS*ALHDIF
Trigger: GAAAATATCGTGCAGAGCCCAAGAGCATTTACGAAT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGCCTCTAACTCTGTCTaGCAGAGGCTGAGATCTTTG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTASNSV*QRLRSL
Trigger: CAAAGATCTCAGCCTCTGCCAGACAGAGTTAGAGGC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTTTCCAAGTAATCAGCTaGTATAAAATGTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIFQVIS*YKMSWR
Trigger: TCGCCAAGACATTTTATACCAGCTGATTACTTGGAA...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTTTCCAAGTAATCAGCTaGTATAAAATGTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGFQVIS*YKMSWR
Trigger: TCGCCAAGACATTTTATACCAGCTGATTACTTGGAA...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCGTTTAAGTCGTCTCTaGTCCGCTAAAAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVERLSRL*SAKSFS
Trigger: AGAGAAACTTTTAGCGGACCAGAGACGACTTAAACG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000634504.1
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCTGGTGTCAACTTTTTaGGCTGTGCCTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNLVSTF*AVPSQQ
Trigger: CTGCTGAGAAGGCACAGCCCAAAAAGTTGACACCAG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACTGGTGTCAACTTTTTaGGCTGTGCCTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTLVSTF*AVPSQQ
Trigger: CTGCTGAGAAGGCACAGCCCAAAAAGTTGACACCAG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTTTTTACATAGTTGCCTaGAAAAGTACCAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAFYIVA*KSTKLL
Trigger: AAGCAGTTTGGTACTTTTCCAGGCAACTATGTAAAA...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAAGAATGAACCACAAGTaGCCTCCAGAGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDARMNHK*PPEPQG
Trigger: GCCCTGTGGCTCTGGAGGCCACTTGTGGTTCATTCT...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCAGCCACGGCAAACCCTaGGCATGTCTTGCTTATGGT +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSSHGKP*ACLAYG
Trigger: ACCATAAGCAAGACATGCCCAGGGTTTGCCGTGGCT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAAAAGAACAGACGTCCTaGTTGCTGCTGGTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEKEQTS*LLLVVA
Trigger: TGCCACTACCAGCAGCAACCAGGACGTCTGTTCTTT...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTAGGTCTTACTCTTACTaGGTTTTAAGGAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: VSVSPITSEFLVGREWVIRSYSY*VLRKFR
Trigger: CCTGAATTTCCTTAAAACCCAGTAAGAGTAAGACCT...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACATTATTAATGGCCCTTaGGTAGTCCTCCAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNIINGP*VVLQGR
Trigger: ACGGCCCTGGAGGACTACCCAAGGGCCATTAATAAT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAGCTCCTTTAGTGTCTaGGCTTTAAAGTCAAATTTG +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAESSFSV*ALKSNL
Trigger: CAAATTTGACTTTAAAGCTCAGACACTAAAGGAGCT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAGCTCCTTTAGTGTCTaGGCTTTAAAGTCAAATTTG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGSSFSV*ALKSNL
Trigger: CAAATTTGACTTTAAAGCTCAGACACTAAAGGAGCT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATGGGAGAGTACAGATCTaGATCATCATCTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDGRVQI*IIISVQ
Trigger: CTGAACAGAGATGATGATTCAGATCTGTACTCTCCC...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371249.6
CDS-3UTR TCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCTTCAGGCTCAATGATTaGGATGGGAGCTCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLFRLND*DGSSLR
Trigger: CCTTAGAGAGCTCCCATCTCAATCATTGAGCCTGAA...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAAGCCTTCAGGCTCAATaGTTGAGATGGGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQSLQAQ*LRWELS
Trigger: AGAGAGCTCCCATCTCAATCATTGAGCCTGAAGGCT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGATATGGGAAAAGAATaGACCACAAGTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNDMGKE*TTSGLQ
Trigger: CTGGAGGCCACTTGTGGTTCATTCTTTTCCCATATC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAGATATGGGAAAAGAATaGACCACAAGTGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEDMGKE*TTSGLQ
Trigger: CTGGAGGCCACTTGTGGTTCATTCTTTTCCCATATC...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCCGTTTGTGTGATCCTTaGACTCCTACAGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLRLCDP*TPTGSR
Trigger: TCTACTCCCTGTAGGAGTTCAAGGATCACACAAACG...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATGCCGATAAACATCCTTaGATTGGACAGAGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDADKHP*IGQSCD
Trigger: GTCACAACTCTGTCCAATTCAAGGATGTTTATCGGC...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAATCTGTGGGGGAAGATaGGAGTTTAGAGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEICGGR*EFRDSG
Trigger: TCCAGAGTCTCTAAACTCTCATCTTCCCCCACAGAT...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCACAATAGGGAGAAAGTaGGGGTACTGTGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSTIGRK*GYCGCL
Trigger: CAGACAGCCACAGTACCCTCACTTTCTCCCTATTGT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTATGGCAGTTTCTTTCCTaGGAACAGGATTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLWQFLS*EQDLKE
Trigger: TTCTTTCAAATCCTGTTCTCAGGAAAGAAACTGCCA...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTTGGCAGTTTCTTTCCTaGGAACAGGATTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLWQFLS*EQDLKE
Trigger: TTCTTTCAAATCCTGTTCTCAGGAAAGAAACTGCCA...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGATCAAGAAGCACCCCTaGAAAAACTATGAGATAAGA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGIKKHP*KNYEIR
Trigger: TCTTATCTCATAGTTTTTTCAGGGGTGCTTCTTGAT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTTTTCGGCAATGTTTATaGTCTCATTGCAAACCGCTT +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATFRQCL*SHCKPL
Trigger: AAGCGGTTTGCAATGAGATCATAAACATTGCCGAAA...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649911.1
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGCTCTGTGGCACGTTTaGACTGGGTGCTTTATTAAG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTALWHV*TGCFIK
Trigger: CTTAATAAAGCACCCAGTGCAAACGTGCCACAGAGC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGCTCTGTGGCACGTTTaGACTGGGTGCTTTATTAAG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNALWHV*TGCFIK
Trigger: CTTAATAAAGCACCCAGTGCAAACGTGCCACAGAGC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
CDS-3UTR GCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATGAAGCTCGATGTAGGTaGGTGGGAAGATTCCCACCC +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINEARCR*VGRFPP
Trigger: GGGTGGGAATCTTCCCACGCACCTACATCGAGCTTC...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCACAGTTCTCATCTACCTaGCGGAGCAGTGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAQFSST*RSSVIL
Trigger: GAGGATCACACTGCTCCGGCAGGTAGATGAGAACTG...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGGAAAAGTACCAAACTaGTTTGTCCTTCTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: DYASGQITQEVEGRGKAEGKVPN*FVLLEV
Trigger: TACTTCAAGAAGGACAAAGCAGTTTGGTACTTTTCC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGGAAAAGTACCAAACTaGTTTGTCCTTCTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGGKVPN*FVLLEV
Trigger: TACTTCAAGAAGGACAAAGCAGTTTGGTACTTTTCC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACATCTGCTCCTGGACTATaGTTCAGGTCAGATTACCCA +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTSAPGL*FRSDYP
Trigger: TGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGA...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTTTGGGATTAAGGCCCTaGTCTGTCATACTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLLGLRP*SVILKN
Trigger: GTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAA...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGATGCTGCCGTGCAAATTaGACGTGCATATGCATTTTT +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRCCRAN*TCICIF
Trigger: AAAAATGCATATGCACGTGCAATTTGCACGGCAGCA...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACCACAATCGGTGAAATaGTGCCGTGCAAATTGCACG +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQPQSVK*CRANCT
Trigger: CGTGCAATTTGCACGGCAGCATTTCACCGATTGTGG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAATGTGTTGCAAGGCATaGCGCCAGTTAGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEMCCKA*RQLVAL
Trigger: AAGTGCAACTAACTGGCGGCATGCCTTGCAACACAT...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTTATATCAAAATGTGTTaGAAGGCATGCCGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIYIKMC*KACRQL
Trigger: TAACTGGCGGCATGCCTTGCAACACATTTTGATATA...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTTATATCAAAATGTGTTaGAAGGCATGCCGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATYIKMC*KACRQL
Trigger: TAACTGGCGGCATGCCTTGCAACACATTTTGATATA...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACATACTCTTCTGTTCCTaGAAAAGAGCGCTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNILFCS*KRALGA
Trigger: TGCTCCCAGCGCTCTTTTGCAGGAACAGAAGAGTAT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAATTCAGAACTCATGGTaGTGGCAGGACAAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEIQNSW*WQDKSS
Trigger: AGACGACTTGTCCTGCCACCACCATGAGTTCTGAAT...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACATTCAGAACTCATGGTaGTGGCAGGACAAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNIQNSW*WQDKSS
Trigger: AGACGACTTGTCCTGCCACCACCATGAGTTCTGAAT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATACATTCATCACAGCTTTaGAACCACCATCACATTCAG +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIHSSQL*NHHHIQ
Trigger: CTGAATGTGATGGTGGTTCCAAAGCTGTGATGAATG...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATCTCTGGCTCCAGACCTaGTTTGCTTTCGTGTTGCCG +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINLWLQT*FAFVLP
Trigger: CGGCAACACGAAAGCAAACCAGGTCTGGAGCCAGAG...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAGCGAGTGAAGAGGGCTaGGCATTTCCATTGGCATCA +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAASEEG*AFPLAS
Trigger: TGATGCCAATGGAAATGCCCAGCCCTCTTCACTCGC...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGACATTTAGTAGAGGACTaGAATCGGTACTCGAAACAG +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRHLVED*NRYSKQ
Trigger: CTGTTTCGAGTACCGATTCCAGTCCTCTACTAAATG...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTATTCGTAAATGCTCTTaGGCTCTGCACGATATTTTC +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLIRKCS*ALHDIF
Trigger: GAAAATATCGTGCAGAGCCCAAGAGCATTTACGAAT...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTTCCAAGTAATCAGCTaGTATAAAATGTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGFQVIS*YKMSWR
Trigger: TCGCCAAGACATTTTATACCAGCTGATTACTTGGAA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCCTGGTGTCAACTTTTTaGGCTGTGCCTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSLVSTF*AVPSQQ
Trigger: CTGCTGAGAAGGCACAGCCCAAAAAGTTGACACCAG...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAAGGGTTTTTCACCAGTaGTCGCTTGATCACATCCAC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTRVFHQ*SLDHIH
Trigger: GTGGATGTGATCAAGCGACCACTGGTGAAAAACCCT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATTGGTCTTGGGCAGTGTaGGGGACTCCACCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINWSWAV*GTPPLS
Trigger: AGACAAAGGTGGAGTCCCCCACACTGCCCAAGACCA...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACCTCTGAGTTTCTGGTaGGCAGGGAATGGGTCATTT +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQPLSFW*AGNGSF
Trigger: AAATGACCCATTCCCTGCCCACCAGAAACTCAGAGG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTTTGGGACAATGGTCCTaGGGTAATTCTGAGATATAT +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFLGQWS*GNSEIY
Trigger: ATATATCTCAGAATTACCCCAGGACCATTGTCCCAA...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATAAAGACTCTAGACTTTaGGACAATGGTCCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDKDSRL*DNGPGV
Trigger: TACCCCAGGACCATTGTCCCAAAGTCTAGAGTCTTT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCAAAAACAAATGTCTGTaGGAAGAGGTAACTCATTCC +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLKNKCL*EEVTHS
Trigger: GGAATGAGTTACCTCTTCCCACAGACATTTGTTTTT...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCAGGTCTTACTCTTACTaGGTTTTAAGGAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLRSYSY*VLRKFR
Trigger: CCTGAATTTCCTTAAAACCCAGTAAGAGTAAGACCT...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAGGTCTTACTCTTACTaGGTTTTAAGGAAATTCAGG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGRSYSY*VLRKFR
Trigger: CCTGAATTTCCTTAAAACCCAGTAAGAGTAAGACCT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATAACAGTGCTCTTAGATaGTGGAGCAGACCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDNSALR*WSRPSK
Trigger: TTTGGAAGGTCTGCTCCACCATCTAAGAGCACTGTT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCTACTCTTTTCAAAGTaGGAGGCAAGATCCCGCACA +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNLLFSK*EARSRT
Trigger: TGTGCGGGATCTTGCCTCCCACTTTGAAAAGAGTAG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAAAGCATAGACCCCACTaGAGTTCATCCCATCCATCT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTKHRPH*SSSHPS
Trigger: AGATGGATGGGATGAACTCCAGTGGGGTCTATGCTT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCGATCTGAAAGGCTACTaGGTCGTTTTTGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLDLKGY*VVFAVL
Trigger: GAGAACAGCAAAAACGACTCAGTAGCCTTTCAGATC...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCCTTGTACCAGTCTTTTaGTCTCTCAGTGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSLVPVF*SLSVPE
Trigger: CTCCGGAACACTGAGAGATCAAAAGACTGGTACAAG...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACATATCCAGGAGTCTCTaGAGAAATTTCCGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNISRSL*RNFRSR
Trigger: CCTACTCCGGAAATTTCTTCAGAGACTCCTGGATAT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCTCATTAGTGATAAACTaGTGGTGCGTCGGAATGACG +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLSLVIN*WCVGMT
Trigger: CGTCATTCCGACGCACCATCAGTTTATCACTAATGA...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACATCATTAGTGATAAACTaGTGGTGCGTCGGAATGACG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTSLVIN*WCVGMT
Trigger: CGTCATTCCGACGCACCATCAGTTTATCACTAATGA...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACTCATTAGTGATAAACTaGTGGTGCGTCGGAATGACG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNSLVIN*WCVGMT
Trigger: CGTCATTCCGACGCACCATCAGTTTATCACTAATGA...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAAGCTCCTTTAGTGTCTaGGCTTTAAAGTCAAATTTG +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGSSFSV*ALKSNL
Trigger: CAAATTTGACTTTAAAGCTCAGACACTAAAGGAGCT...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACTCCTCTCACCCTTTCTaGAGGACATTTCTACTTGTG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNSSHPF*RTFLLV
Trigger: CACAAGTAGAAATGTCCTTCAGAAAGGGTGAGAGGA...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAAGGGGTGTTGAGATCTaGGAGTCTCTGTTCAGTACT +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQRGVEI*ESLFST
Trigger: AGTACTGAACAGAGACTCTCAGATCTCAACACCCCT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR TCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATAAGTATTTCCAGCTATaGACTACCCTCAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDKYFQL*TTLRQR
Trigger: CCTTTGTCTGAGGGTAGTTCATAGCTGGAAATACTT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCATTTGTGACAGCAGCTaGGGCACAGGCATTGAAAAC +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSICDSS*GTGIEN
Trigger: GTTTTCAATGCCTGTGCCTCAGCTGCTGTCACAAAT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAATTTGTGACAGCAGCTaGGGCACAGGCATTGAAAAC +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQICDSS*GTGIEN
Trigger: GTTTTCAATGCCTGTGCCTCAGCTGCTGTCACAAAT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGATGGCAGTTTCTTTCCTaGGAACAGGATTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRWQFLS*EQDLKE
Trigger: TTCTTTCAAATCCTGTTCTCAGGAAAGAAACTGCCA...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATATGTTCTCGATTGTGTTaGAAGAGCACAATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCICSRLC*KSTIVG
Trigger: TCCTACTATTGTGCTCTTGCAACACAATCGAGAACA...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCGCTGATATTCGTAAATaGTCTTGGGCTCTGCACGAT +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLADIRK*SWALHD
Trigger: ATCGTGCAGAGCCCAAGAGCATTTACGAATATCAGC...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAACACGTTTGCACTGGGTaGTTTATTAAGCGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEHVCTG*FIKRLH
Trigger: ATGGAGACGCTTAATAAAGCACCCAGTGCAAACGTG...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCACGTTTGCACTGGGTaGTTTATTAAGCGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNHVCTG*FIKRLH
Trigger: ATGGAGACGCTTAATAAAGCACCCAGTGCAAACGTG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAATATCAGCCTCTTCTTaGTCGCGTTTAAGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTISASS*SRLSRL
Trigger: GAGACGACTTAAACGCGAGCAAGAAGAGGCTGATAT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACATATCAGCCTCTTCTTaGTCGCGTTTAAGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNISASS*SRLSRL
Trigger: GAGACGACTTAAACGCGAGCAAGAAGAGGCTGATAT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR GCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATACAATATCTCCCTTCTaGAGAGGAAGCTCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDTISPF*RGSSFS
Trigger: ACTAAAGGAGCTTCCTCTGCAGAAGGGAGATATTGT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTGGAAAAGTACCAAACTaGTTTGTCCTTCTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIGKVPN*FVLLEV
Trigger: TACTTCAAGAAGGACAAAGCAGTTTGGTACTTTTCC...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAAAAGTACCAAACTaGTTTGTCCTTCTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEGKVPN*FVLLEV
Trigger: TACTTCAAGAAGGACAAAGCAGTTTGGTACTTTTCC...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAGGAAAAGTACCAAACTaGTTTGTCCTTCTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLGKVPN*FVLLEV
Trigger: TACTTCAAGAAGGACAAAGCAGTTTGGTACTTTTCC...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAGCTGAATGCATCAGGTaGCTCAGTTTTGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQAECIR*LSFASV
Trigger: AACAGAGGCAAAACTGAGGCACCTGATGCATTCAGC...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCTCTGAAGAGAAGCCTTaGCAGGGTGTACTCAGATTC +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSSEEKP*QGVLRF
Trigger: GAATCTGAGTACACCCTGGCAAGGCTTCTCTTCAGA...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATATTGGGATTAAGGCCCTaGTCTGTCATACTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCILGLRP*SVILKN
Trigger: GTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAA...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCATGTGTTGCAAGGCATaGCGCCAGTTAGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSMCCKA*RQLVAL
Trigger: AAGTGCAACTAACTGGCGGCATGCCTTGCAACACAT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAATGTGTTGCAAGGCATaGCGCCAGTTAGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQMCCKA*RQLVAL
Trigger: AAGTGCAACTAACTGGCGGCATGCCTTGCAACACAT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATAAGGAGTTTGGGGCTTaGCTTTACCCGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINKEFGA*LYPEAW
Trigger: CCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTT...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCATGGTGTGCCATATTaGTACATGTTGGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNHGVPY*YMLGKH
Trigger: ATGCTTCCCCAACATGTAGCAATATGGCACACCATG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAATGTCAGAAGGAAGGTTaGGATGCACACTTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQCQKEG*DAHFCS
Trigger: GCTACAGAAGTGTGCATCCCAACCTTCCTTCTGACA...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACTGCCCACTTCATCCATaGAAACATCGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNCPLHP*KHRLSP
Trigger: AGGACTTAAGCGATGTTTCCATGGATGAAGTGGGCA...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACATGCCCACTTCATCCATaGAAACATCGCTTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTCPLHP*KHRLSP
Trigger: AGGACTTAAGCGATGTTTCCATGGATGAAGTGGGCA...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTACAGAAAATGAGTATCTaGGAGAGTACAGATCTGAAT +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLQKMSI*ESTDLN
Trigger: ATTCAGATCTGTACTCTCCCAGATACTCATTTTCTG...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAATTCGTAAATGCTCTTaGGCTCTGCACGATATTTTC +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIIRKCS*ALHDIF
Trigger: GAAAATATCGTGCAGAGCCCAAGAGCATTTACGAAT...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGACTCATCTTTTCGTTaGTCAGAACGGAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTDSSFR*SERKTC
Trigger: GCAAGTCTTCCGTTCTGACCAACGAAAAGATGAGTC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGACTCATCTTTTCGTTaGTCAGAACGGAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNDSSFR*SERKTC
Trigger: GCAAGTCTTCCGTTCTGACCAACGAAAAGATGAGTC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTCACTGCATGGAAGTTaGAAGAATATATATATCCAG +
Preference number: 4 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGSLHGS*KNIYIQ
Trigger: CTGGATATATATATTCTTCCAACTTCCATGCAGTGA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTTTCCAAGTAATCAGCTaGTATAAAATGTCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLFQVIS*YKMSWR
Trigger: TCGCCAAGACATTTTATACCAGCTGATTACTTGGAA...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACATTCCAAAACCTGCACTaGTGTCAACTTTTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTFQNLH*CQLFGL
Trigger: CAGCCCAAAAAGTTGACACCAGTGCAGGTTTTGGAA...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAAACCTTAGACAGGCTTaGGTTTTAAACACAACACTT +
Preference number: 4 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLNLRQA*VLNTTL
Trigger: AAGTGTTGTGTTTAAAACCCAAGCCTGTCTAAGGTT...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGAACCTTAGACAGGCTTaGGTTTTAAACACAACACTT +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVENLRQA*VLNTTL
Trigger: AAGTGTTGTGTTTAAAACCCAAGCCTGTCTAAGGTT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAAAAGACTCTAGACTTTaGGACAATGGTCCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEKDSRL*DNGPGV
Trigger: TACCCCAGGACCATTGTCCCAAAGTCTAGAGTCTTT...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTAAAAACAAATGTCTGTaGGAAGAGGTAACTCATTCC +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFKNKCL*EEVTHS
Trigger: GGAATGAGTTACCTCTTCCCACAGACATTTGTTTTT...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAAGTGCTCTTAGATGGTaGAGCAGACCTTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWESALRW*SRPSKT
Trigger: TGTTTTGGAAGGTCTGCTCCACCATCTAAGAGCACT...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCTTTACCCGGAAGCATaGCTAATATATCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATLYPEA*LIYQNV
Trigger: CACATTTTGATATATTAGCCATGCTTCCGGGTAAAG...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCTTTACCCGGAAGCATaGCTAATATATCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVELYPEA*LIYQNV
Trigger: CACATTTTGATATATTAGCCATGCTTCCGGGTAAAG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACATATTGCTACATGTTaGGGAAGCATAGACCCCACT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTHIATC*GSIDPT
Trigger: AGTGGGGTCTATGCTTCCCCAACATGTAGCAATATG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCACTTGTACCAGTCTTTTaGTCTCTCAGTGTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDALVPVF*SLSVPE
Trigger: CTCCGGAACACTGAGAGATCAAAAGACTGGTACAAG...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAATGTCTTGGCGATTCTaGATCTTTAGTGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTMSWRF*IFSGSR
Trigger: TCTGCTTCCACTAAAGATTCAGAATCGCCAAGACAT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
CDS-3UTR TCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAAAAAAGATCGGTTCATaGATGATGCTTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEKKIGS*MMLPPP
Trigger: TGGAGGAGGAAGCATCATTCATGAACCGATCTTTTT...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACAAAAAGATCGGTTCATaGATGATGCTTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNKKIGS*MMLPPP
Trigger: TGGAGGAGGAAGCATCATTCATGAACCGATCTTTTT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAATTACTACCGTTTGTGTaGTCCTTGAACTCCTACAGG +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQLLPFV*SLNSYR
Trigger: CCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAA...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCTTACTACCGTTTGTGTaGTCCTTGAACTCCTACAGG +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSLLPFV*SLNSYR
Trigger: CCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAA...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAGCCGATAAACATCCTTaGATTGGACAGAGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQADKHP*IGQSCD
Trigger: GTCACAACTCTGTCCAATTCAAGGATGTTTATCGGC...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACAAGTATTTCCAGCTATaGACTACCCTCAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNKYFQL*TTLRQR
Trigger: CCTTTGTCTGAGGGTAGTTCATAGCTGGAAATACTT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACATGCTACTCCTATTTGTaGGCTTGGATGTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTCYSYL*AWMCIC
Trigger: ACAGATACACATCCAAGCTCACAAATAGGAGTAGCA...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAATTTGTGACAGCAGCTaGGGCACAGGCATTGAAAAC +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAICDSS*GTGIEN
Trigger: GTTTTCAATGCCTGTGCCTCAGCTGCTGTCACAAAT...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAATCAAGAAGCACCCCTaGAAAAACTATGAGATAAGA +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIIKKHP*KNYEIR
Trigger: TCTTATCTCATAGTTTTTTCAGGGGTGCTTCTTGAT...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAATCAAGAAGCACCCCTaGAAAAACTATGAGATAAGA +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRIKKHP*KNYEIR
Trigger: TCTTATCTCATAGTTTTTTCAGGGGTGCTTCTTGAT...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCAGATATACAAATGCGTaGGGCTGGCATCATATGCAA +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLRYTNA*GWHHMQ
Trigger: TTGCATATGATGCCAGCCTCACGCATTTGTATATCT...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGATGAAGAAATCATGTaGGCATTCCCACCTTTACGA +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTDEEIM*AFPPLR
Trigger: TCGTAAAGGTGGGAATGCTCACATGATTTCTTCATC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACTACTGAGTCGTTTTTaGTGTTCTCGATTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTLLSRF*CSRLCC
Trigger: GCAACACAATCGAGAACAGCAAAAACGACTCAGTAG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCCTACTGAGTCGTTTTTaGTGTTCTCGATTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLLLSRF*CSRLCC
Trigger: GCAACACAATCGAGAACAGCAAAAACGACTCAGTAG...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAAATGCTCTTGGGCTCTaGACGATATTTTCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTNALGL*TIFSCV
Trigger: GACACAAGAAAATATCGTGCAGAGCCCAAGAGCATT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACATCAGAACGGAAGACTTaGCAGGCTGATATTCGTAAA +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTSERKT*QADIRK
Trigger: TTTACGAATATCAGCCTGGCAAGTCTTCCGTTCTGA...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR GCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAATATCAGCCTCTTCTTaGTCGCGTTTAAGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQISASS*SRLSRL
Trigger: GAGACGACTTAAACGCGAGCAAGAAGAGGCTGATAT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAACAATATCTCCCTTCTaGAGAGGAAGCTCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTTISPF*RGSSFS
Trigger: ACTAAAGGAGCTTCCTCTGCAGAAGGGAGATATTGT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR GCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAGCTGAATGCATCAGGTaGCTCAGTTTTGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAAECIR*LSFASV
Trigger: AACAGAGGCAAAACTGAGGCACCTGATGCATTCAGC...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATTTGGGATTAAGGCCCTaGTCTGTCATACTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDLGLRP*SVILKN
Trigger: GTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAA...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCGTGCAAATTGCACGTaGATATGCATTTTTACTATA +
Preference number: 4 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATRANCT*ICIFTI
Trigger: TATAGTAAAAATGCATATGCACGTGCAATTTGCACG...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGACGTGCAAATTGCACGTaGATATGCATTTTTACTATA +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGRANCT*ICIFTI
Trigger: TATAGTAAAAATGCATATGCACGTGCAATTTGCACG...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACTGCTGCCGTGCAAATTaGACGTGCATATGCATTTTT +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNCCRAN*TCICIF
Trigger: AAAAATGCATATGCACGTGCAATTTGCACGGCAGCA...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATTATATCAAAATGTGTTaGAAGGCATGCCGCCAGTTA +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDYIKMC*KACRQL
Trigger: TAACTGGCGGCATGCCTTGCAACACATTTTGATATA...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCACTGATGGAAAGGCTTaGGAATCAGTTCCAATAAGG +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLTDGKA*ESVPIR
Trigger: CCTTATTGGAACTGATTCCCAAGCCTTTCCATCAGT...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATACAGAAAATGAGTATCTaGGAGAGTACAGATCTGAAT +
Preference number: 4 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIQKMSI*ESTDLN
Trigger: ATTCAGATCTGTACTCTCCCAGATACTCATTTTCTG...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGTCTACTTTCTTATCTaGGGGTTCCCAGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNVYFLI*GFPVIS
Trigger: AGAAATGACTGGGAACCCCCAGATAAGAAAGTAGAC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAGTCTACTTTCTTATCTaGGGGTTCCCAGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEVYFLI*GFPVIS
Trigger: AGAAATGACTGGGAACCCCCAGATAAGAAAGTAGAC...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGTCTACTTTCTTATCTaGGGGTTCCCAGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTVYFLI*GFPVIS
Trigger: AGAAATGACTGGGAACCCCCAGATAAGAAAGTAGAC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTTCACTGCATGGAAGTTaGAAGAATATATATATCCAG +
Preference number: 4 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFSLHGS*KNIYIQ
Trigger: CTGGATATATATATTCTTCCAACTTCCATGCAGTGA...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGATCACTGCATGGAAGTTaGAAGAATATATATATCCAG +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGSLHGS*KNIYIQ
Trigger: CTGGATATATATATTCTTCCAACTTCCATGCAGTGA...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCGTTTAAGTCGTCTCTaGTCCGCTAAAAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNRLSRL*SAKSFS
Trigger: AGAGAAACTTTTAGCGGACCAGAGACGACTTAAACG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATCTGGTGTCAACTTTTTaGGCTGTGCCTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINLVSTF*AVPSQQ
Trigger: CTGCTGAGAAGGCACAGCCCAAAAAGTTGACACCAG...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTTTTTACATAGTTGCCTaGAAAAGTACCAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIFYIVA*KSTKLL
Trigger: AAGCAGTTTGGTACTTTTCCAGGCAACTATGTAAAA...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGTTTTACATAGTTGCCTaGAAAAGTACCAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: WLTLLLDYASGQITQEVEFYIVA*KSTKLL
Trigger: AAGCAGTTTGGTACTTTTCCAGGCAACTATGTAAAA...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CCA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGATTTTACATAGTTGCCTaGAAAAGTACCAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGFYIVA*KSTKLL
Trigger: AAGCAGTTTGGTACTTTTCCAGGCAACTATGTAAAA...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATTTGGGACAATGGTCCTaGGGTAATTCTGAGATATAT +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDLGQWS*GNSEIY
Trigger: ATATATCTCAGAATTACCCCAGGACCATTGTCCCAA...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAAAAGACTCTAGACTTTaGGACAATGGTCCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQKDSRL*DNGPGV
Trigger: TACCCCAGGACCATTGTCCCAAAGTCTAGAGTCTTT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAAACAGTGCTCTTAGATaGTGGAGCAGACCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQNSALR*WSRPSK
Trigger: TTTGGAAGGTCTGCTCCACCATCTAAGAGCACTGTT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCAACAGTGCTCTTAGATaGTGGAGCAGACCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSNSALR*WSRPSK
Trigger: TTTGGAAGGTCTGCTCCACCATCTAAGAGCACTGTT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGACTTTACCCGGAAGCATaGCTAATATATCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRLYPEA*LIYQNV
Trigger: CACATTTTGATATATTAGCCATGCTTCCGGGTAAAG...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAGATCTGAAAGGCTACTaGGTCGTTTTTGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDADLKGY*VVFAVL
Trigger: GAGAACAGCAAAAACGACTCAGTAGCCTTTCAGATC...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCACTGCTTTGTCCTTCTTaGAGTACCAACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDALLCPS*STNKPS
Trigger: GGATGGTTTGTTGGTACTTCAAGAAGGACAAAGCAG...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAAAAAAGATCGGTTCATaGATGATGCTTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQKKIGS*MMLPPP
Trigger: TGGAGGAGGAAGCATCATTCATGAACCGATCTTTTT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATCGTTTGTGTGATCCTTaGACTCCTACAGGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINRLCDP*TPTGSR
Trigger: TCTACTCCCTGTAGGAGTTCAAGGATCACACAAACG...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCAAGTATTTCCAGCTATaGACTACCCTCAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSKYFQL*TTLRQR
Trigger: CCTTTGTCTGAGGGTAGTTCATAGCTGGAAATACTT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCAGATATACAAATGCGTaGGGCTGGCATCATATGCAA +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSRYTNA*GWHHMQ
Trigger: TTGCATATGATGCCAGCCTCACGCATTTGTATATCT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATAGACGGGCAAATTGGTaGGGCATACCTGAATTTCTG +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINRRANW*GIPEFL
Trigger: CAGAAATTCAGGTATGCCTCACCAATTTGCCCGTCT...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACTACTGAGTCGTTTTTaGTGTTCTCGATTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQLLSRF*CSRLCC
Trigger: GCAACACAATCGAGAACAGCAAAAACGACTCAGTAG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACATCTGTCCCTGTCTTTTaGTTCTTACTTTATCCACTG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTSVPVF*FLLYPL
Trigger: CAGTGGATAAAGTAAGAAGCAAAAGACAGGGACAGA...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACATTGGGATTAAGGCCCTaGTCTGTCATACTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTLGLRP*SVILKN
Trigger: GTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAA...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCTGCTGCCGTGCAAATTaGACGTGCATATGCATTTTT +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSCCRAN*TCICIF
Trigger: AAAAATGCATATGCACGTGCAATTTGCACGGCAGCA...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATATGTGTTGCAAGGCATaGCGCCAGTTAGTTGCACTT +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINMCCKA*RQLVAL
Trigger: AAGTGCAACTAACTGGCGGCATGCCTTGCAACACAT...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATAGAAAAATCTATGTCTaGATAGGACATGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: TTLVTTVCVILELLQGVDRKIYV*IGHALS
Trigger: ACTGAGAGCATGTCCTATGCAGACATAGATTTTTCT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATATTCAGAACTCATGGTaGTGGCAGGACAAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINIQNSW*WQDKSS
Trigger: AGACGACTTGTCCTGCCACCACCATGAGTTCTGAAT...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCATTCGTAAATGCTCTTaGGCTCTGCACGATATTTTC +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLIRKCS*ALHDIF
Trigger: GAAAATATCGTGCAGAGCCCAAGAGCATTTACGAAT...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAAATCCCATATCTTTTTaGGAGGCGGTTTCCCAAACT +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQNPISF*EAVSQT
Trigger: AGTTTGGGAAACCGCCTCCCAAAAAGATATGGGATT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACGTTTAAGTCGTCTCTaGTCCGCTAAAAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQRLSRL*SAKSFS
Trigger: AGAGAAACTTTTAGCGGACCAGAGACGACTTAAACG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCATTCCAAAACCTGCACTaGTGTCAACTTTTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAFQNLH*CQLFGL
Trigger: CAGCCCAAAAAGTTGACACCAGTGCAGGTTTTGGAA...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAAGCTCATCTTTTCGTTaGTCAGAACGGAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDASSSFR*SERKTC
Trigger: GCAAGTCTTCCGTTCTGACCAACGAAAAGATGAGCT...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306402.10
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGGGTTTGAATTTGGATaGAAGGATTTCCGAAATGCA +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTGFEFG*KDFRNA
Trigger: TGCATTTCGGAAATCCTTCCATCCAAATTCAAACCC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATCTGCTTTGTCCTTCTTaGAGTACCAACAAACCATCC +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINLLCPS*STNKPS
Trigger: GGATGGTTTGTTGGTACTTCAAGAAGGACAAAGCAG...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATCTGAGGCACAGGCATTaGAAACAAATTTTGCCTACC +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINLRHRH*KQILPT
Trigger: GGTAGGCAAAATTTGTTTTCAATGCCTGTGCCTCAG...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAAATGCTCTTGGGCTCTaGACGATATTTTCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDANALGL*TIFSCV
Trigger: GACACAAGAAAATATCGTGCAGAGCCCAAGAGCATT...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAATCTGTCCCTGTCTTTTaGTTCTTACTTTATCCACTG +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQSVPVF*FLLYPL
Trigger: CAGTGGATAAAGTAAGAAGCAAAAGACAGGGACAGA...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAAGAAAAATCTATGTCTaGATAGGACATGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PLGLRPCSVILKNKCLWERKIYV*IGHALS
Trigger: ACTGAGAGCATGTCCTATGCAGACATAGATTTTTCT...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACAGAAAATGAGTATCTaGGAGAGTACAGATCTGAAT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTQKMSI*ESTDLN
Trigger: ATTCAGATCTGTACTCTCCCAGATACTCATTTTCTG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCAGAAAATGAGTATCTaGGAGAGTACAGATCTGAAT +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNQKMSI*ESTDLN
Trigger: ATTCAGATCTGTACTCTCCCAGATACTCATTTTCTG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATTTCCAAAACCTGCACTaGTGTCAACTTTTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINFQNLH*CQLFGL
Trigger: CAGCCCAAAAAGTTGACACCAGTGCAGGTTTTGGAA...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACAACCTTAGACAGGCTTaGGTTTTAAACACAACACTT +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNNLRQA*VLNTTL
Trigger: AAGTGTTGTGTTTAAAACCCAAGCCTGTCTAAGGTT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCTTGGGACAATGGTCCTaGGGTAATTCTGAGATATAT +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSLGQWS*GNSEIY
Trigger: ATATATCTCAGAATTACCCCAGGACCATTGTCCCAA...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATAAAGACTCTAGACTTTaGGACAATGGTCCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINKDSRL*DNGPGV
Trigger: TACCCCAGGACCATTGTCCCAAAGTCTAGAGTCTTT...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAAAAAACAAATGTCTGTaGGAAGAGGTAACTCATTCC +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTKNKCL*EEVTHS
Trigger: GGAATGAGTTACCTCTTCCCACAGACATTTGTTTTT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACAAAAACAAATGTCTGTaGGAAGAGGTAACTCATTCC +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNKNKCL*EEVTHS
Trigger: GGAATGAGTTACCTCTTCCCACAGACATTTGTTTTT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATAGTGCTCTTAGATGGTaGAGCAGACCTTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINSALRW*SRPSKT
Trigger: TGTTTTGGAAGGTCTGCTCCACCATCTAAGAGCACT...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCCTTTACCCGGAAGCATaGCTAATATATCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLLYPEA*LIYQNV
Trigger: CACATTTTGATATATTAGCCATGCTTCCGGGTAAAG...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACTTAAACGTTCGGCTATaGACTGAAGATGAAGAAATC +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNLNVRL*TEDEEI
Trigger: GATTTCTTCATCTTCAGTCCATAGCCGAACGTTTAA...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCAGCTCCTTTAGTGTCTaGGCTTTAAAGTCAAATTTG +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSSSFSV*ALKSNL
Trigger: CAAATTTGACTTTAAAGCTCAGACACTAAAGGAGCT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAAGCTCCTTTAGTGTCTaGGCTTTAAAGTCAAATTTG +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQSSFSV*ALKSNL
Trigger: CAAATTTGACTTTAAAGCTCAGACACTAAAGGAGCT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR TCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCATGGCAGTTTCTTTCCTaGGAACAGGATTTGAAAGAA +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAWQFLS*EQDLKE
Trigger: TTCTTTCAAATCCTGTTCTCAGGAAAGAAACTGCCA...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR TCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCATCAAGAAGCACCCCTaGAAAAACTATGAGATAAGA +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSIKKHP*KNYEIR
Trigger: TCTTATCTCATAGTTTTTTCAGGGGTGCTTCTTGAT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCGGAAAAGTACCAAACTaGTTTGTCCTTCTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSGKVPN*FVLLEV
Trigger: TACTTCAAGAAGGACAAAGCAGTTTGGTACTTTTCC...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCATCTGTCCCTGTCTTTTaGTTCTTACTTTATCCACTG +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDASVPVF*FLLYPL
Trigger: CAGTGGATAAAGTAAGAAGCAAAAGACAGGGACAGA...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACGTGCAAATTGCACGTaGATATGCATTTTTACTATA +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTRANCT*ICIFTI
Trigger: TATAGTAAAAATGCATATGCACGTGCAATTTGCACG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCGTGCAAATTGCACGTaGATATGCATTTTTACTATA +
Preference number: 4 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNRANCT*ICIFTI
Trigger: TATAGTAAAAATGCATATGCACGTGCAATTTGCACG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATTGCTGCCGTGCAAATTaGACGTGCATATGCATTTTT +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINCCRAN*TCICIF
Trigger: AAAAATGCATATGCACGTGCAATTTGCACGGCAGCA...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAAGAAAAATCTATGTCTaGATAGGACATGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQRKIYV*IGHALS
Trigger: ACTGAGAGCATGTCCTATGCAGACATAGATTTTTCT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATGGGGATGAGAAACAGTaGTGCAGTAATGAACAGATT +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINGDEKQ*CSNEQI
Trigger: AATCTGTTCATTACTGCAGCACTGTTTCTCATCCCC...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649911.1
CDS-3UTR CCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATCATTTAGTAGAGGACTaGAATCGGTACTCGAAACAG +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINHLVED*NRYSKQ
Trigger: CTGTTTCGAGTACCGATTCCAGTCCTCTACTAAATG...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACATCACTGCATGGAAGTTaGAAGAATATATATATCCAG +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTSLHGS*KNIYIQ
Trigger: CTGGATATATATATTCTTCCAACTTCCATGCAGTGA...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CCA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACATTTTACATAGTTGCCTaGAAAAGTACCAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTFYIVA*KSTKLL
Trigger: AAGCAGTTTGGTACTTTTCCAGGCAACTATGTAAAA...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CCA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCAACCTTAGACAGGCTTaGGTTTTAAACACAACACTT +
Preference number: 4 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSNLRQA*VLNTTL
Trigger: AAGTGTTGTGTTTAAAACCCAAGCCTGTCTAAGGTT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAATTTTACATAGTTGCCTaGAAAAGTACCAAACTGCTT +
Preference number: 4 (lower is better)
Translates to: LEIYKCVRLASYANVALQFYIVA*KSTKLL
Trigger: AAGCAGTTTGGTACTTTTCCAGGCAACTATGTAAAA...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATTTGGGACAATGGTCCTaGGGTAATTCTGAGATATAT +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINLGQWS*GNSEIY
Trigger: ATATATCTCAGAATTACCCCAGGACCATTGTCCCAA...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR GCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATAGAAAAATCTATGTCTaGATAGGACATGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINRKIYV*IGHALS
Trigger: ACTGAGAGCATGTCCTATGCAGACATAGATTTTTCT...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATCAGAAAATGAGTATCTaGGAGAGTACAGATCTGAAT +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINQKMSI*ESTDLN
Trigger: ATTCAGATCTGTACTCTCCCAGATACTCATTTTCTG...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CCA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCATCACTGCATGGAAGTTaGAAGAATATATATATCCAG +
Preference number: 4 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDASLHGS*KNIYIQ
Trigger: CTGGATATATATATTCTTCCAACTTCCATGCAGTGA...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR GCA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATCGTGCAAATTGCACGTaGATATGCATTTTTACTATA +
Preference number: 4 (lower is better)
Translates to: YIKMCCKACRQLVALAINRANCT*ICIFTI
Trigger: TATAGTAAAAATGCATATGCACGTGCAATTTGCACG...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS GCA 90 bp CTTCCAAAGGATGCCAACTCCTTGCTGGTCGCCGGGCGGGCGGGCTaGGCGCGTCCGCCCCACTCGCACTACACGCTGCAGCTGGCCCCG +
Preference number: 5 (lower is better)
Translates to: LPKDANSLLVAGRAG*ARPPHSHYTLQLAP
Trigger: CGGGGCCAGCTGCAGCGTGTAGTGCGAGTGGGGCGGACGCGCGCAGCCCGCCCGCCCGGCGACCAGCAAGGAGTTGGCATCCTTTGGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306402.10
CDS GCA 90 bp CTGTGCCGGCTGTGCGGGAGACAAGGCCGGGAGCCGGTGCTCGGGTaGCCGCAGCCTCCAAGGGAGTGCCTTCGGCAGGGTCACGTGCAA +
Preference number: 5 (lower is better)
Translates to: LCRLCGRQGREPVLG*PQPPRECLRQGHVQ
Trigger: TTGCACGTGACCCTGCCGAAGGCACTCCCTTGGAGGCTGCGGGCACCCGAGCACCGGCTCCCGGCCTTGTCTCCCGCACAGCCGGCACAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474353.6
ENST00000486141.3
CDS CCA 90 bp GCAGGAGGGACCAGCGGAGGTGGTGGTGAGAAGGATGGTGGCGTCTaGCTAATGGGGGCAAAGGAGCCAGAGGCGCGGGCTGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: AGGTSGGGGEKDGGV*LMGAKEPEARAGWL
Trigger: CAGCCAGCCAGCCCGCGCCTCTGGCTCCTTTGCCCCCATTAGCCAGACGCCACCATCCTTCTCACCACCACCTCCGCTGGTCCCTCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000277982.9
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
CDS GCA 90 bp TGGGCAGAAAGCTTTCACGAACTCTTCCAAAGGATGCCAACTCCTTaGTGGTCGCCGGGCGGGCGGGCTGCGCGCGTCCGCCCCACTCGC +
Preference number: 5 (lower is better)
Translates to: WAESFHELFQRMPTP*WSPGGRAARVRPTR
Trigger: GCGAGTGGGGCGGACGCGCGCAGCCCGCCCGCCCGGCGACCAGCAAGGAGTTGGCATCCTTTGGAAGAGTTCGTGAAAGCTTTCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
CDS GCA 90 bp CAAGGCCGGGAGCCGGTGCTCGGGTGCCCGCAGCCTCCAAGGGAGTaGCTTCGGCAGGGTCACGTGCAACACGAGAGGAGTTTTCTGACG +
Preference number: 5 (lower is better)
Translates to: QGREPVLGCPQPPRE*LRQGHVQHERSFLT
Trigger: CGTCAGAAAACTCCTCTCGTGTTGCACGTGACCCTGCCGAAGGCACTCCCTTGGAGGCTGCGGGCACCCGAGCACCGGCTCCCGGCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474353.6
ENST00000486141.3
CDS TCA 90 bp TCTGCGGAGGTCCTCCGGGGCAGGAGGGACCAGCGGAGGTGGTGGTaGGAAGGATGGTGGCGTCTGGCTAATGGGGGCAAAGGAGCCAGA +
Preference number: 5 (lower is better)
Translates to: SAEVLRGRRDQRRWW*EGWWRLANGGKGAR
Trigger: TCTGGCTCCTTTGCCCCCATTAGCCAGACGCCACCATCCTTCTCACCACCACCTCCGCTGGTCCCTCCTGCCCCGGAGGACCTCCGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000277982.9
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
CDS TCA 90 bp CCTTGGGTAGTCCTCCAGGGCCGTGGGTCTCTCCTGAGAGGGCTCTaGGCTGCGGCTAAGCCTGGCCATGGTGTGTCGGGAAGACAGGCG +
Preference number: 5 (lower is better)
Translates to: PWVVLQGRGSLLRGL*AAAKPGHGVSGRQA
Trigger: CGCCTGTCTTCCCGACACACCATGGCCAGGCTTAGCCGCAGCTCAGAGCCCTCTCAGGAGAGACCCACGGCCCTGGAGGACTACCCAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371228.2
ENST00000607232.5
CDS GCA 90 bp TGGTTGACTCAAGTAGGGACTCGGCCGAGCGGGCTGAGGTCAGGCTaGCCCGGGACAGCACAGGTGTGGGAGACTTGCTCAGCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: WLTQVGTRPSGLRSG*PGTAQVWETCSAFR
Trigger: CCGGAAGGCTGAGCAAGTCTCCCACACCTGTGCTGTCCCGGGGCAGCCTGACCTCAGCCCGCTCGGCCGAGTCCCTACTTGAGTCAACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 90 bp TCGGGAAGGTCAGAGGTGAGGCGGCAGAGGCAGTCGCTGGGATTGTaGGGACGCAGCCAAGAGGCCCCAGAGGTGTTGGAGGTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: SGRSEVRRQRQSLGL*GRSQEAPEVLEVWQ
Trigger: CTGCCAGACCTCCAACACCTCTGGGGCCTCTTGGCTGCGTCCCCACAATCCCAGCGACTGCCTCTGCCGCCTCACCTCTGACCTTCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277982.9
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
CDS CCA 90 bp GCAGAAAGCTTTCACGAACTCTTCCAAAGGATGCCAACTCCTTGCTaGTCGCCGGGCGGGCGGGCTGCGCGCGTCCGCCCCACTCGCACT +
Preference number: 5 (lower is better)
Translates to: AESFHELFQRMPTPC*SPGGRAARVRPTRT
Trigger: AGTGCGAGTGGGGCGGACGCGCGCAGCCCGCCCGCCCGGCGACCAGCAAGGAGTTGGCATCCTTTGGAAGAGTTCGTGAAAGCTTTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
CDS CCA 90 bp TGGTGGCGTCTGGCTAATGGGGGCAAAGGAGCCAGAGGCGCGGGCTaGCTGGCTGTGGTGGGGCCACCTCTGGGACTTGTCAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: WWRLANGGKGARGAG*LAVVGPPLGLVRRK
Trigger: CTTCCTTCTGACAAGTCCCAGAGGTGGCCCCACCACAGCCAGCCAGCCCGCGCCTCTGGCTCCTTTGCCCCCATTAGCCAGACGCCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371245.7
CDS GCA 90 bp ACCGCTTCCTGGCTCCCACCTCTCCGAGCAGCTTTCCTCCCCGCCTaGTCGCCACCTCTATGCCGCTCTGTCTGCTCAGCCTCACTTCCT +
Preference number: 5 (lower is better)
Translates to: TASWLPPLRAAFLPA*SPPLCRSVCSASLP
Trigger: AGGAAGTGAGGCTGAGCAGACAGAGCGGCATAGAGGTGGCGAGCAGGCGGGGAGGAAAGCTGCTCGGAGAGGTGGGAGCCAGGAAGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649575.1
CDS GCA 90 bp GCATCCAGGCGCCACTCAGGCTGTCTAGAGGTCTGCTGCTGCTCATaGTTCCGGATGGTGGTGAAGCGGGTGTATGAGGCCGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: ASRRHSGCLEVCCCS*FRMVVKRVYEAGQV
Trigger: CACCTGCCCGGCCTCATACACCCGCTTCACCACCATCCGGAAGCATGAGCAGCAGCAGACCTCTAGACAGCCTGAGTGGCGCCTGGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS GCA 90 bp CCTCTGGCATCCAGGCGCCACTCAGGCTGTCTAGAGGTCTGCTGCTaGTCATGCTTCCGGATGGTGGTGAAGCGGGTGTATGAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: PLASRRHSGCLEVCC*SCFRMVVKRVYEAG
Trigger: CCCGGCCTCATACACCCGCTTCACCACCATCCGGAAGCATGAGCAGCAGCAGACCTCTAGACAGCCTGAGTGGCGCCTGGATGCCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 90 bp GCTTTCGTGTTGCCGGGTTTCCTGAGGGCTCGCAGGGCTACTGCTTaGGGTTTCCCTGTAGGAAGACGAGGCCCGGAGAGTCACCGCTCC +
Preference number: 5 (lower is better)
Translates to: AFVLPGFLRARRATA*GFPVGRRGPESHRS
Trigger: GGAGCGGTGACTCTCCGGGCCTCGTCTTCCTACAGGGAAACCCCAAGCAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACACGAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
ENST00000492542.1
ENST00000607232.5
CDS TCA 90 bp GGGCTGGCTGGCTGTGGTGGGGCCACCTCTGCAGATGAGGGGGAATaGAATCATCTAGAGTCGGGAAGGTCAGAGGTGAGGCGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GLAGCGGATSADEGE*NHLESGRSEVRRQR
Trigger: CCTCTGCCGCCTCACCTCTGACCTTCCCGACTCTAGATGATTTCATTCCCCCTCATCTGCAGAGGTGGCCCCACCACAGCCAGCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277982.9
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
CDS GCA 90 bp TCCCCTCTGGCATCCAGGCGCCACTCAGGCTGTCTAGAGGTCTGCTaGTGCTCATGCTTCCGGATGGTGGTGAAGCGGGTGTATGAGGCC +
Preference number: 5 (lower is better)
Translates to: SPLASRRHSGCLEVC*CSCFRMVVKRVYEA
Trigger: GGCCTCATACACCCGCTTCACCACCATCCGGAAGCATGAGCAGCAGCAGACCTCTAGACAGCCTGAGTGGCGCCTGGATGCCAGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 90 bp CTCAGCCTTCCGGACAGGTCCAGGGATGGCATGGAACGGGACCGCTaGATCAGCTGCTCAAAAGCGGTGATGCGGGAAGAGACGGTGTGC +
Preference number: 5 (lower is better)
Translates to: LSLPDRSRDGMERDR*ISCSKAVMREETVC
Trigger: GCACACCGTCTCTTCCCGCATCACCGCTTTTGAGCAGCTGATTCAGCGGTCCCGTTCCATGCCATCCCTGGACCTGTCCGGAAGGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 90 bp GGTCTGCTGCTGCTCATGCTTCCGGATGGTGGTGAAGCGGGTGTATaGGGCCGGGCAGGTGCCCTTGCACTTGTTGAGGCGATGTTTGGG +
Preference number: 5 (lower is better)
Translates to: GLLLLMLPDGGEAGV*GRAGALALVEAMFG
Trigger: CCCAAACATCGCCTCAACAAGTGCAAGGGCACCTGCCCGGCCTCATACACCCGCTTCACCACCATCCGGAAGCATGAGCAGCAGCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS GCA 90 bp GTTTGCTTTCGTGTTGCCGGGTTTCCTGAGGGCTCGCAGGGCTACTaGTTGGGGTTTCCCTGTAGGAAGACGAGGCCCGGAGAGTCACCG +
Preference number: 5 (lower is better)
Translates to: VCFRVAGFPEGSQGY*LGFPCRKTRPGESP
Trigger: CGGTGACTCTCCGGGCCTCGTCTTCCTACAGGGAAACCCCAAGCAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACACGAAAGCAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
ENST00000492542.1
ENST00000607232.5
CDS CCA 90 bp GGGCCCAGCTCACCCCTGGACAATGCCAGGCTACTCTTTTCAAAGTaGGAGGCAAGATCCCGCACACTCGAGGAGGAGGAGATGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GPSSPLDNARLLFSK*EARSRTLEEEEMEP
Trigger: GGGCTCCATCTCCTCCTCCTCGAGTGTGCGGGATCTTGCCTCCCACTTTGAAAAGAGTAGCCTGGCATTGTCCAGGGGTGAGCTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 90 bp ACCCGGGGGCCTAGCACAGGTGGTCTCACATCTGGGAACGAAGCCTaGGTCCCCAGGGAAGGACTCTCGCCACGGTTAACGGCATCTTTA +
Preference number: 5 (lower is better)
Translates to: TRGPSTGGLTSGNEA*VPREGLSPRLTASL
Trigger: TAAAGATGCCGTTAACCGTGGCGAGAGTCCTTCCCTGGGGACTCAGGCTTCGTTCCCAGATGTGAGACCACCTGTGCTAGGCCCCCGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474353.6
ENST00000486141.3
CDS TCA 90 bp GGGATGGCATGGAACGGGACCGCTGAATCAGCTGCTCAAAAGCGGTaGTGCGGGAAGAGACGGTGTGCTTGGGGATGTGTTCCGAGCCCT +
Preference number: 5 (lower is better)
Translates to: GMAWNGTAESAAQKR*CGKRRCAWGCVPSP
Trigger: AGGGCTCGGAACACATCCCCAAGCACACCGTCTCTTCCCGCATCACCGCTTTTGAGCAGCTGATTCAGCGGTCCCGTTCCATGCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS GCA 90 bp TTGTCCCCTCTGGCATCCAGGCGCCACTCAGGCTGTCTAGAGGTCTaGTGCTGCTCATGCTTCCGGATGGTGGTGAAGCGGGTGTATGAG +
Preference number: 5 (lower is better)
Translates to: LSPLASRRHSGCLEV*CCSCFRMVVKRVYE
Trigger: CTCATACACCCGCTTCACCACCATCCGGAAGCATGAGCAGCAGCAGACCTCTAGACAGCCTGAGTGGCGCCTGGATGCCAGAGGGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 90 bp AGACCCCACTGGAGTTCATCCCATCCATCTCCTTGGGATGGAGCTTaGTTGACTCAAGTAGGGACTCGGCCGAGCGGGCTGAGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: RPHWSSSHPSPWDGA*LTQVGTRPSGLRSG
Trigger: GCCTGACCTCAGCCCGCTCGGCCGAGTCCCTACTTGAGTCAACCAAGCTCCATCCCAAGGAGATGGATGGGATGAACTCCAGTGGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCTGCTGGGCTTGAGGTaGCTGGCTCCCACCTCTCCG +
Preference number: 5 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQALLGLR*LAPTSP
Trigger: CGGAGAGGTGGGAGCCAGCAACCTCAAGCCCAGCAG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371246.6
CDS TCA 90 bp TCATGGTACTGCTCGACTTGCTGTCATAATCCCGTCGGGAGCGCATaGGCAGGTTCTCAATGCTCCCTCCCACTTGGAGGGGGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: SWYCSTCCHNPVGSA*AGSQCSLPLGGGGL
Trigger: GAGGCCTCCCCCTCCAAGTGGGAGGGAGCATTGAGAACCTGCTCATGCGCTCCCGACGGGATTATGACAGCAAGTCGAGCAGTACCATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS GCA 90 bp GCATCCCAGCCTTTCTTGAGAGAGGACAGGGCCTCCTGCCGCTGGTaGTGTACTCCTGGAGGCTCATGGTACTGCTCGACTTGCTGTCAT +
Preference number: 5 (lower is better)
Translates to: ASQPFLREDRASCRW*CTPGGSWYCSTCCH
Trigger: ATGACAGCAAGTCGAGCAGTACCATGAGCCTCCAGGAGTACAGCACCAGCGGCAGGAGGCCCTGTCCTCTCTCAAGAAAGGCTGGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 90 bp ACTGCATCCCAGCCTTTCTTGAGAGAGGACAGGGCCTCCTGCCGCTaGTGCTGTACTCCTGGAGGCTCATGGTACTGCTCGACTTGCTGT +
Preference number: 5 (lower is better)
Translates to: TASQPFLREDRASCR*CCTPGGSWYCSTCC
Trigger: ACAGCAAGTCGAGCAGTACCATGAGCCTCCAGGAGTACAGCACCAGCGGCAGGAGGCCCTGTCCTCTCTCAAGAAAGGCTGGGATGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 90 bp CACAGGTGTGGGAGACTTGCTCAGCCTTCCGGACAGGTCCAGGGATaGCATGGAACGGGACCGCTGAATCAGCTGCTCAAAAGCGGTGAT +
Preference number: 5 (lower is better)
Translates to: HRCGRLAQPSGQVQG*HGTGPLNQLLKSGD
Trigger: ATCACCGCTTTTGAGCAGCTGATTCAGCGGTCCCGTTCCATGCCATCCCTGGACCTGTCCGGAAGGCTGAGCAAGTCTCCCACACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 90 bp TTGGGGAAGCATAGACCCCACTGGAGTTCATCCCATCCATCTCCTTaGGATGGAGCTTGGTTGACTCAAGTAGGGACTCGGCCGAGCGGG +
Preference number: 5 (lower is better)
Translates to: LGKHRPHWSSSHPSP*DGAWLTQVGTRPSG
Trigger: CCCGCTCGGCCGAGTCCCTACTTGAGTCAACCAAGCTCCATCCCAAGGAGATGGATGGGATGAACTCCAGTGGGGTCTATGCTTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTAGGCAGTCGCTGGGATaGTGGGGACGCAGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGRQSLG*WGRSQE
Trigger: CTCTTGGCTGCGTCCCCACAATCCCAGCGACTGCCT...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS TCA 90 bp AGAGCTCCCCAGCGGCAGCTGCAAGAAGCTATCTTGGTGGATGCCTaGAGATGGCGTGTGGACACCACCGTCTCCATTCATGTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: RAPQRQLQEAILVDA*RWRVDTTVSIHVKG
Trigger: TCCCTTCACATGAATGGAGACGGTGGTGTCCACACGCCATCTTCAGGCATCCACCAAGATAGCTTCTTGCAGCTGCCGCTGGGGAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS GCA 90 bp GCAGCTCTTCTTAGAGATCTTGGGTCCACCAGGGCCTCTTTCGCCTaGCCCCCTCTCTGCTTTCCTCTCATATTGTCCACTCTCTTCGCG +
Preference number: 5 (lower is better)
Translates to: AALLRDLGSTRASFA*PPLCFPLILSTLFA
Trigger: CGCGAAGAGAGTGGACAATATGAGAGGAAAGCAGAGAGGGGGGCAGGCGAAAGAGGCCCTGGTGGACCCAAGATCTCTAAGAAGAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277982.9
ENST00000361941.7
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000649575.1
CDS CCA 90 bp ACTCTCTTCGCGCCATGGCTGTGGGCTTGCAGTGGCACTGCGACTTaGGGAGGAGGAGAAAGGCAGGTCCATGTAATCCACAGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: TLFAPWLWACSGTAT*GGGERQVHVIHRVF
Trigger: AAAAACCCTGTGGATTACATGGACCTGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACTGCAAGCCCACAGCCATGGCGCGAAGAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277982.9
ENST00000371246.6
CDS CCA 90 bp CTGCTGGGCTTGAGGTTGCTGTGGGCTTGCAGTGGCACTGCGACTTaGGGAGGAGGAGAAAGGCAGGTCCATGTAATCCACAGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: LLGLRLLWACSGTAT*GGGERQVHVIHRVF
Trigger: AAAAACCCTGTGGATTACATGGACCTGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACTGCAAGCCCACAGCAACCTCAAGCCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000354106.7
ENST00000371239.5
ENST00000371241.5
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CAA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCAGGCAGTCGCTGGGATaGTGGGGACGCAGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLRQSLG*WGRSQE
Trigger: CTCTTGGCTGCGTCCCCACAATCCCAGCGACTGCCT...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTCAGTGGCACTGCGACTaGGGGAGGAGGAGAAAGGCA +
Preference number: 5 (lower is better)
Translates to: VSVSPITSEFLVGREWVIQWHCD*GRRRKA
Trigger: TGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACTG...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTGAGGTTGCTGTGGGCTaGCAGTGGCACTGCGACTTG +
Preference number: 5 (lower is better)
Translates to: VSVSPITSEFLVGREWVIEVAVG*QWHCDL
Trigger: CAAGTCGCAGTGCCACTGCAAGCCCACAGCAACCTC...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306402.10
ENST00000371249.6
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACTGAGGAGGGTGCTCTaGTCCCCTCTGGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAELRRVL*SPLASR
Trigger: CCTGGATGCCAGAGGGGACAAGAGCACCCTCCTCAG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGCCGGGCAGGTGCCCTaGCACTTGTTGAGGCGATGT +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAEAGQVP*HLLRRC
Trigger: ACATCGCCTCAACAAGTGCAAGGGCACCTGCCCGGC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 90 bp GGGGTTCTGCTGTCTGGGGGTGCCGAGTGGGACATAAGGCTTTGGTaGGCTCAGGTAGAGGGAATCCTTATAGGTATTGTGGATGGTGGG +
Preference number: 5 (lower is better)
Translates to: GVLLSGGAEWDIRLW*AQVEGILIGIVDGG
Trigger: CCCACCATCCACAATACCTATAAGGATTCCCTCTACCTGAGCTCACCAAAGCCTTATGTCCCACTCGGCACCCCCAGACAGCAGAACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474353.6
ENST00000486141.3
CDS CCA 90 bp TGGCAGCGAGTGAAGAGGGCTGGGCATTTCCATTGGCATCAGCACTaGAAGAAAGCCTCCACTCATCTGCTGAAGAAGGCTCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: WQRVKRAGHFHWHQH*KKASTHLLKKALAP
Trigger: TGGAGCCAGAGCCTTCTTCAGCAGATGAGTGGAGGCTTTCTTCCAGTGCTGATGCCAATGGAAATGCCCAGCCCTCTTCACTCGCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000607232.5
CDS CCA 90 bp GGGACTTGTCAGAAGGAAGGTTGGGATGCACACTTCTGTAGCCCTTaGCAGCGAGTGAAGAGGGCTGGGCATTTCCATTGGCATCAGCAC +
Preference number: 5 (lower is better)
Translates to: GTCQKEGWDAHFCSP*QRVKRAGHFHWHQH
Trigger: GTGCTGATGCCAATGGAAATGCCCAGCCCTCTTCACTCGCTGCCAAGGGCTACAGAAGTGTGCATCCCAACCTTCCTTCTGACAAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
ENST00000486141.3
ENST00000492542.1
ENST00000607232.5
CDS CCA 90 bp ACACTATCAGAGCTCCCCAGCGGCAGCTGCAAGAAGCTATCTTGGTaGATGCCTGAAGATGGCGTGTGGACACCACCGTCTCCATTCATG +
Preference number: 5 (lower is better)
Translates to: TLSELPSGSCKKLSW*MPEDGVWTPPSPFM
Trigger: CATGAATGGAGACGGTGGTGTCCACACGCCATCTTCAGGCATCCACCAAGATAGCTTCTTGCAGCTGCCGCTGGGGAGCTCTGATAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS CCA 90 bp ATGACACTATCAGAGCTCCCCAGCGGCAGCTGCAAGAAGCTATCTTaGTGGATGCCTGAAGATGGCGTGTGGACACCACCGTCTCCATTC +
Preference number: 5 (lower is better)
Translates to: MTLSELPSGSCKKLS*WMPEDGVWTPPSPF
Trigger: GAATGGAGACGGTGGTGTCCACACGCCATCTTCAGGCATCCACCAAGATAGCTTCTTGCAGCTGCCGCTGGGGAGCTCTGATAGTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS CCA 90 bp CCCCCTCTCTGCTTTCCTCTCATATTGTCCACTCTCTTCGCGCCATaGCTGCCTCTTGCTCTGGCTGCTAAAGGCATCACTAAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: PPLCFPLILSTLFAP*LPLALAAKGITKLG
Trigger: TCCCAGCTTAGTGATGCCTTTAGCAGCCAGAGCAAGAGGCAGCCATGGCGCGAAGAGAGTGGACAATATGAGAGGAAAGCAGAGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS-3UTR CAA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGCTTTGTCTTGCCCATaGCTGCCAGGTGCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGALSCP*LPGAKP
Trigger: TGGCTTGGCACCTGGCAGCAATGGGCAAGACAAAGC...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTTGGTTTGCTTTCGTGTaGCCGGGTTTCCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAWFAFV*PGFLRA
Trigger: AGCCCTCAGGAAACCCGGCAACACGAAAGCAAACCA...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTGGCTCCAGACCTGGTTaGCTTTCGTGTTGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: VSVSPITSEFLVGREWVIGSRPG*LSCCRV
Trigger: AACCCGGCAACACGAAAGCAAACCAGGTCTGGAGCC...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTGCCATGGCTGTGGGCTaGCAGTGGCACTGCGACTTG +
Preference number: 5 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFAMAVG*QWHCDL
Trigger: CAAGTCGCAGTGCCACTGCAAGCCCACAGCCATGGC...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371246.6
CDS-3UTR CAA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTTGGTGGGAAGATGCATaGGTCCAGGAGCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: VSVSPITSEFLVGREWVIWWEDA*VQELWA
Trigger: TGCCCAGAGCTCCTGGACCAATGCATCTTCCCACCA...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGTTGCTGTGGGCTaGCAGTGGCACTGCGACTTG +
Preference number: 5 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGEVAVG*QWHCDL
Trigger: CAAGTCGCAGTGCCACTGCAAGCCCACAGCAACCTC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGAGGTTGCTGTGGGCTaGCAGTGGCACTGCGACTTG +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAEEVAVG*QWHCDL
Trigger: CAAGTCGCAGTGCCACTGCAAGCCCACAGCAACCTC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGCATCCCAGCCTTTCTaGAGAGAGGACAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAEASQPF*REDRAS
Trigger: GGAGGCCCTGTCCTCTCTCAAGAAAGGCTGGGATGC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 90 bp ATGAACACTGCCGCCACTGCCTTCTCTGCTGTCAGTGGAGATATTTaGACAGCGGTCCACGTCATCAGAGCAGGTGGAGAGAGGCTCAGA +
Preference number: 5 (lower is better)
Translates to: MNTAATAFSAVSGDI*TAVHVIRAGGERLR
Trigger: TCTGAGCCTCTCTCCACCTGCTCTGATGACGTGGACCGCTGTTCAAATATCTCCACTGACAGCAGAGAAGGCAGTGGCGGCAGTGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS GCA 90 bp TATCAGAGCTCCCCAGCGGCAGCTGCAAGAAGCTATCTTGGTGGATaGCTGAAGATGGCGTGTGGACACCACCGTCTCCATTCATGTGAA +
Preference number: 5 (lower is better)
Translates to: YQSSPAAAARSYLGG*LKMACGHHRLHSCE
Trigger: TTCACATGAATGGAGACGGTGGTGTCCACACGCCATCTTCAGGCATCCACCAAGATAGCTTCTTGCAGCTGCCGCTGGGGAGCTCTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS GCA 90 bp TCACTAAGCTGGGAGATGACACTATCAGAGCTCCCCAGCGGCAGCTaGAAGAAGCTATCTTGGTGGATGCCTGAAGATGGCGTGTGGACA +
Preference number: 5 (lower is better)
Translates to: SLSWEMTLSELPSGS*KKLSWWMPEDGVWT
Trigger: TGTCCACACGCCATCTTCAGGCATCCACCAAGATAGCTTCTTGCAGCTGCCGCTGGGGAGCTCTGATAGTGTCATCTCCCAGCTTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS CCA 90 bp TTGGTGAGCTCAGGTAGAGGGAATCCTTATAGGTATTGTGGATGGTaGGGGACTGCCATGCAAAGCGGTCCTTTTGAGGGAGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: LVSSGRGNPYRYCGW*GTAMQSGPFEGEEG
Trigger: GCCCTCCTCTCCCTCAAAAGGACCGCTTTGCATGGCAGTCCCCCACCATCCACAATACCTATAAGGATTCCCTCTACCTGAGCTCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474353.6
ENST00000486141.3
CDS CCA 90 bp CTCATTGCAAACCGCTTCCTGTGGGCTTGCAGTGGCACTGCGACTTaGGGAGGAGGAGAAAGGCAGGTCCATGTAATCCACAGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: LIANRFLWACSGTAT*GGGERQVHVIHRVF
Trigger: AAAAACCCTGTGGATTACATGGACCTGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACTGCAAGCCCACAGGAAGCGGTTTGCAATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649911.1
CDS-3UTR CAA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCGGGTCGGCAGTTGCTTaGTCTTGCCCATTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLGSAVA*SCPLLP
Trigger: TGGCAGCAATGGGCAAGACAAAGCAACTGCCGACCC...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTAGTGTGGCCGACCTCTaGACTACCTTCTCACCATCA +
Preference number: 5 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQASVADL*TTFSPS
Trigger: TGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACACT...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGCAGTATCGTCTATATaGAGGAGGTCCCCAAAGCGC +
Preference number: 5 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAAVSSI*RRSPKR
Trigger: GCGCTTTGGGGACCTCCTCAATATAGACGATACTGC...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTCAGTGGCACTGCGACTaGGGGAGGAGGAGAAAGGCA +
Preference number: 5 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFQWHCD*GRRRKA
Trigger: TGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACTG...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGACAGTGGCACTGCGACTaGGGGAGGAGGAGAAAGGCA +
Preference number: 5 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGQWHCD*GRRRKA
Trigger: TGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACTG...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CAA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCTCTTCTTAGAGATCTaGGGTCCACCAGGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQALFLEI*GPPGPL
Trigger: AAGAGGCCCTGGTGGACCCAAGATCTCTAAGAAGAG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATGGTGGGAAGATGCATaGGTCCAGGAGCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAEWWEDA*VQELWA
Trigger: TGCCCAGAGCTCCTGGACCAATGCATCTTCCCACCA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CAA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGAGGTTGCTGTGGGCTaGCAGTGGCACTGCGACTTG +
Preference number: 5 (lower is better)
Translates to: WLTLLLDYASGQITQEVEEVAVG*QWHCDL
Trigger: CAAGTCGCAGTGCCACTGCAAGCCCACAGCAACCTC...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371249.6
ENST00000634504.1
CDS-3UTR CAA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTTGGGGGACTCCACCTTaGTCTAGGGACAGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: VSVSPITSEFLVGREWVIWGTPP*SRDSLG
Trigger: ACCAAGACTGTCCCTAGACAAAGGTGGAGTCCCCCA...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGAACAGACGTCCTGGTaGCTGCTGGTAGTGGCAGAA +
Preference number: 5 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGEQTSW*LLVVAE
Trigger: TTCTGCCACTACCAGCAGCAACCAGGACGTCTGTTC...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAATGCTCCCTCCCACTaGGAGGGGGAGGCCTCTTTT +
Preference number: 5 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGNAPSH*EGEASF
Trigger: AAAAGAGGCCTCCCCCTCCAAGTGGGAGGGAGCATT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCAGGTGCCCTTGCACTaGTTGAGGCGATGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGQVPLH*LRRCLG
Trigger: CCCCAAACATCGCCTCAACAAGTGCAAGGGCACCTG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 90 bp AGAAGGAAGGTTGGGATGCACACTTCTGTAGCCCTTGGCAGCGAGTaGAGAGGGCTGGGCATTTCCATTGGCATCAGCACTGGAAGAAAG +
Preference number: 5 (lower is better)
Translates to: RRKVGMHTSVALGSE*RGLGISIGISTGRK
Trigger: CTTTCTTCCAGTGCTGATGCCAATGGAAATGCCCAGCCCTCTTCACTCGCTGCCAAGGGCTACAGAAGTGTGCATCCCAACCTTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
ENST00000486141.3
ENST00000492542.1
ENST00000607232.5
CDS GCA 90 bp GATAAACTGATGGTGCGTCGGAATGACGCCTGTGTGGCGTCGAGCTaGAATATCAGCCTCTTCTTGCTCGCGTTTAAGTCGTCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: DKLMVRRNDACVASS*NISLFLLAFKSSLV
Trigger: GACCAGAGACGACTTAAACGCGAGCAAGAAGAGGCTGATATTGCAGCTCGACGCCACACAGGCGTCATTCCGACGCACCATCAGTTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000474353.6
ENST00000607232.5
ENST00000634504.1
CDS GCA 90 bp CTCTCTGCTTTCCTCTCATATTGTCCACTCTCTTCGCGCCATGGCTaGCTCTTGCTCTGGCTGCTAAAGGCATCACTAAGCTGGGAGATG +
Preference number: 5 (lower is better)
Translates to: LSAFLSYCPLSSRHG*LLLWLLKASLSWEM
Trigger: CATCTCCCAGCTTAGTGATGCCTTTAGCAGCCAGAGCAAGAGGCAGCCATGGCGCGAAGAGAGTGGACAATATGAGAGGAAAGCAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS CCA 90 bp CTTGCTGTGACTGGAAAACTGTGGGCTTGCAGTGGCACTGCGACTTaGGGAGGAGGAGAAAGGCAGGTCCATGTAATCCACAGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: LAVTGKLWACSGTAT*GGGERQVHVIHRVF
Trigger: AAAAACCCTGTGGATTACATGGACCTGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACTGCAAGCCCACAGTTTTCCAGTCACAGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
CDS CCA 90 bp GCTTTGGTGAGCTCAGGTAGAGGGAATCCTTATAGGTATTGTGGATaGTGGGGGACTGCCATGCAAAGCGGTCCTTTTGAGGGAGAGGAG +
Preference number: 5 (lower is better)
Translates to: ALVSSGRGNPYRYCG*WGTAMQSGPFEGEE
Trigger: CTCCTCTCCCTCAAAAGGACCGCTTTGCATGGCAGTCCCCCACCATCCACAATACCTATAAGGATTCCCTCTACCTGAGCTCACCAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474353.6
ENST00000486141.3
CDS CCA 90 bp TCCCGTCGGGAGCGCATGAGCAGGTTCTCAATGCTCCCTCCCACTTaGAGGGGGAGGCCTCTTTTGGAATCATTTAAAGAACCAGAAACA +
Preference number: 5 (lower is better)
Translates to: SRRERMSRFSMLPPT*RGRPLLESFKEPET
Trigger: TGTTTCTGGTTCTTTAAATGATTCCAAAAGAGGCCTCCCCCTCCAAGTGGGAGGGAGCATTGAGAACCTGCTCATGCGCTCCCGACGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 90 bp GGAAATCTCCATGAACACTGCCGCCACTGCCTTCTCTGCTGTCAGTaGAGATATTTGAACAGCGGTCCACGTCATCAGAGCAGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: GNLHEHCRHCLLCCQ*RYLNSGPRHQSRWR
Trigger: TCTCCACCTGCTCTGATGACGTGGACCGCTGTTCAAATATCTCCACTGACAGCAGAGAAGGCAGTGGCGGCAGTGTTCATGGAGATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTGCTTTGTCTTGCCCATaGCTGCCAGGTGCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIALSCP*LPGAKP
Trigger: TGGCTTGGCACCTGGCAGCAATGGGCAAGACAAAGC...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGCAGTTGCTTTGTCTaGCCCATTGCTGCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGGSCFV*PIAARC
Trigger: GCACCTGGCAGCAATGGGCAAGACAAAGCAACTGCC...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGGGTCGGCAGTTGCTTaGTCTTGCCCATTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLGSAVA*SCPLLP
Trigger: TGGCAGCAATGGGCAAGACAAAGCAACTGCCGACCC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGGCTCCAGACCTGGTTaGCTTTCGTGTTGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLGSRPG*LSCCRV
Trigger: AACCCGGCAACACGAAAGCAAACCAGGTCTGGAGCC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTGGCTCCAGACCTGGTTaGCTTTCGTGTTGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIGSRPG*LSCCRV
Trigger: AACCCGGCAACACGAAAGCAAACCAGGTCTGGAGCC...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCGTGGCATCCTGGGACTaGTCAGAAGGAAGGTTGGGA +
Preference number: 5 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLVASWD*SEGRLG
Trigger: TCCCAACCTTCCTTCTGACAAGTCCCAGGATGCCAC...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATGGGTTTTTCCTGGGTaGGTGCTGAGTCCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAEWVFPG*VLSPAL
Trigger: GAGAGCAGGACTCAGCACCAACCCAGGAAAAACCCA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CAA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTGGGTTTTTCCTGGGTaGGTGCTGAGTCCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGWVFPG*VLSPAL
Trigger: GAGAGCAGGACTCAGCACCAACCCAGGAAAAACCCA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CAA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTAGTGTGGCCGACCTCTaGACTACCTTCTCACCATCA +
Preference number: 5 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGSVADL*TTFSPS
Trigger: TGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACACT...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTTGGTGGGAAGATGCATaGGTCCAGGAGCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIWWEDA*VQELWA
Trigger: TGCCCAGAGCTCCTGGACCAATGCATCTTCCCACCA...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGAAGAGGCCAGATCGGTaGATCTGGTGCATGTCCCGA +
Preference number: 5 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGKRPDR*IWCMSR
Trigger: TCGGGACATGCACCAGATCAACCGATCTGGCCTCTT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 90 bp CAGGTGCCCTTGCACTTGTTGAGGCGATGTTTGGGGAAATCTCCATaGACACTGCCGCCACTGCCTTCTCTGCTGTCAGTGGAGATATTT +
Preference number: 5 (lower is better)
Translates to: QVPLHLLRRCLGKSP*TLPPLPSLLSVEIF
Trigger: AAATATCTCCACTGACAGCAGAGAAGGCAGTGGCGGCAGTGTTCATGGAGATTTCCCCAAACATCGCCTCAACAAGTGCAAGGGCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS GCA 90 bp AGGATTTCCGAAATGCAGGCCTTCGCAGCTGACAGGGGCTTCTTGTaGTTACACACAGGGCCTAACGCATTGCTAGTGTTAAACGTTCGG +
Preference number: 5 (lower is better)
Translates to: RISEMQAFAADRGFL*LHTGPNALLVLNVR
Trigger: CCGAACGTTTAACACTAGCAATGCGTTAGGCCCTGTGTGTAAGCACAAGAAGCCCCTGTCAGCTGCGAAGGCCTGCATTTCGGAAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 90 bp CTTTTGATCTCTCAGTGTTCCGGAGTGGGATGCCCACTTCATCCATaGAAACATCGCTTAAGTCCTGAGTGCTCTTCACCACCCGCCTAC +
Preference number: 5 (lower is better)
Translates to: LLISQCSGVGCPLHP*KHRLSPECSSPPAY
Trigger: GTAGGCGGGTGGTGAAGAGCACTCAGGACTTAAGCGATGTTTCCATGGATGAAGTGGGCATCCCACTCCGGAACACTGAGAGATCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000465489.1
ENST00000474353.6
ENST00000607232.5
CDS CCA 90 bp GGAGGAGAAAGGCAGGTCCATGTAATCCACAGGGTTTTTCACCAGTaGTCGCTTGATCACATCCACGTAGGTGATGGGGAAGATGCCTTG +
Preference number: 5 (lower is better)
Translates to: GGERQVHVIHRVFHQ*SLDHIHVGDGEDAL
Trigger: CAAGGCATCTTCCCCATCACCTACGTGGATGTGATCAAGCGACCACTGGTGAAAAACCCTGTGGATTACATGGACCTGCCTTTCTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS CCA 90 bp CTCTCATATTGTCCACTCTCTTCGCGCCATGGCTGCCTCTTGCTCTaGCTGCTAAAGGCATCACTAAGCTGGGAGATGACACTATCAGAG +
Preference number: 5 (lower is better)
Translates to: LSYCPLSSRHGCLLL*LLKASLSWEMTLSE
Trigger: CTCTGATAGTGTCATCTCCCAGCTTAGTGATGCCTTTAGCAGCCAGAGCAAGAGGCAGCCATGGCGCGAAGAGAGTGGACAATATGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS CCA 90 bp AAGGCCCCTGAAGCTCAAGGCATGGTGTGCCATATTGCTACATGTTaGGGAAGCATAGACCCCACTGGAGTTCATCCCATCCATCTCCTT +
Preference number: 5 (lower is better)
Translates to: KAPEAQGMVCHIATC*GSIDPTGVHPIHLL
Trigger: AAGGAGATGGATGGGATGAACTCCAGTGGGGTCTATGCTTCCCCAACATGTAGCAATATGGCACACCATGCCTTGAGCTTCAGGGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGCTTTGTCTTGCCCATaGCTGCCAGGTGCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIALSCP*LPGAKP
Trigger: TGGCTTGGCACCTGGCAGCAATGGGCAAGACAAAGC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGGCAGTTGCTTTGTCTaGCCCATTGCTGCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIGSCFV*PIAARC
Trigger: GCACCTGGCAGCAATGGGCAAGACAAAGCAACTGCC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGGGTCGGCAGTTGCTTaGTCTTGCCCATTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIGSAVA*SCPLLP
Trigger: TGGCAGCAATGGGCAAGACAAAGCAACTGCCGACCC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGATGGTTTGCTTTCGTGTaGCCGGGTTTCCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGWFAFV*PGFLRA
Trigger: AGCCCTCAGGAAACCCGGCAACACGAAAGCAAACCA...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAAGGCAGTCGCTGGGATaGTGGGGACGCAGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: PLGLRPCSVILKNKCLWERQSLG*WGRSQE
Trigger: CTCTTGGCTGCGTCCCCACAATCCCAGCGACTGCCT...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAGTGTGGCCGACCTCTaGACTACCTTCTCACCATCA +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAESVADL*TTFSPS
Trigger: TGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACACT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CAA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGCAGTATCGTCTATATaGAGGAGGTCCCCAAAGCGC +
Preference number: 5 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGAVSSI*RRSPKR
Trigger: GCGCTTTGGGGACCTCCTCAATATAGACGATACTGC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CAA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATCAGTGGCACTGCGACTaGGGGAGGAGGAGAAAGGCA +
Preference number: 5 (lower is better)
Translates to: TTLVTTVCVILELLQGVDQWHCD*GRRRKA
Trigger: TGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACTG...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACTCTTCTTAGAGATCTaGGGTCCACCAGGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAELFLEI*GPPGPL
Trigger: AAGAGGCCCTGGTGGACCCAAGATCTCTAAGAAGAG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGAGCTCATCTTTTCGTaGGTCAGAACGGAAGACTTG +
Preference number: 5 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAELIFS*VRTEDL
Trigger: CAAGTCTTCCGTTCTGACCAACGAAAAGATGAGCTC...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306402.10
ENST00000371249.6
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGGTCTTGTTGCATTCTaGGGCTTGAAGCCTTCAGGC +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAEGLVAF*GLKPSG
Trigger: GCCTGAAGGCTTCAAGCCCAAGAATGCAACAAGACC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCTGTCTAGGGACAGTCTaGGTAGCTCAGACTGACCTC +
Preference number: 5 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLCLGTV*VAQTDL
Trigger: GAGGTCAGTCTGAGCTACCAAGACTGTCCCTAGACA...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGATGGGGGACTCCACCTTaGTCTAGGGACAGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGWGTPP*SRDSLG
Trigger: ACCAAGACTGTCCCTAGACAAAGGTGGAGTCCCCCA...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGTGGGGGACTCCACCTTaGTCTAGGGACAGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: WLTLLLDYASGQITQEVEWGTPP*SRDSLG
Trigger: ACCAAGACTGTCCCTAGACAAAGGTGGAGTCCCCCA...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTATGGGGGACTCCACCTTaGTCTAGGGACAGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLWGTPP*SRDSLG
Trigger: ACCAAGACTGTCCCTAGACAAAGGTGGAGTCCCCCA...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCTCAGGTGCCTCAGTTTaGCCTCTGTTTCCCCATCCA +
Preference number: 5 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLSGASV*PLFPHP
Trigger: TGGATGGGGAAACAGAGGCAAAACTGAGGCACCTGA...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTCCCTACCACCTAGAATaGCTACTCCTATTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAPYHLE*LLLFVS
Trigger: GCTCACAAATAGGAGTAGCAATTCTAGGTGGTAGGG...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGATCTTTGTCTTGCCCATaGCTGCCAGGTGCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGSLSCP*LPGAKP
Trigger: TGGCTTGGCACCTGGCAGCAATGGGCAAGACAAAGA...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371249.6
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAATCACTTTGTGGGTTGTaGTTCCTGTCCAGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAESLCGL*FLSRLW
Trigger: CCACAGCCTGGACAGGAACAACAACCCACAAAGTGA...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTCCTTGGGATGGAGCTaGGTTGACTCAAGTAGGGAC +
Preference number: 5 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGSLGWS*VDSSRD
Trigger: GTCCCTACTTGAGTCAACCAAGCTCCATCCCAAGGA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCCGCTTCCTGTGGGCTaGCAGTGGCACTGCGACTTG +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNPLPVG*QWHCDL
Trigger: CAAGTCGCAGTGCCACTGCAAGCCCACAGGAAGCGG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649911.1
CDS TCA 90 bp TCGTCTATATTGAGGAGGTCCCCAAAGCGCTCATTAGTGATAAACTaGTGGTGCGTCGGAATGACGCCTGTGTGGCGTCGAGCTGCAATA +
Preference number: 5 (lower is better)
Translates to: SSILRRSPKRSLVIN*WCVGMTPVWRRAAI
Trigger: TATTGCAGCTCGACGCCACACAGGCGTCATTCCGACGCACCATCAGTTTATCACTAATGAGCGCTTTGGGGACCTCCTCAATATAGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000474353.6
ENST00000607232.5
ENST00000634504.1
CDS CCA 90 bp CTCAGTGGTTTAAGGTGGTGGGAAGATGCATTGGTCCAGGAGCTCTaGGCAGAAAGCTTTCACGAACTCTTCCAAAGGATGCCAACTCCT +
Preference number: 5 (lower is better)
Translates to: LSGLRWWEDALVQEL*AESFHELFQRMPTP
Trigger: AGGAGTTGGCATCCTTTGGAAGAGTTCGTGAAAGCTTTCTGCCCAGAGCTCCTGGACCAATGCATCTTCCCACCACCTTAAACCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
ENST00000607232.5
CDS CCA 90 bp GATGGTGCCAGTTCACTTTGTGGGTTGTTGTTCCTGTCCAGGCTGTaGTCTGAGTATGGCACGGAGTTTCCATTATTAATGGCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: DGASSLCGLLFLSRL*SEYGTEFPLLMALG
Trigger: CCCAAGGGCCATTAATAATGGAAACTCCGTGCCATACTCAGACCACAGCCTGGACAGGAACAACAACCCACAAAGTGAACTGGCACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371228.2
ENST00000607232.5
CDS CCA 90 bp ACCAGTGGTTTAAGGTGGTGGGAAGATGCATTGGTCCAGGAGCTCTaGGCAGAAAGCTTTCACGAACTCTTCCAAAGGATGCCAACTCCT +
Preference number: 5 (lower is better)
Translates to: TSGLRWWEDALVQEL*AESFHELFQRMPTP
Trigger: AGGAGTTGGCATCCTTTGGAAGAGTTCGTGAAAGCTTTCTGCCCAGAGCTCCTGGACCAATGCATCTTCCCACCACCTTAAACCACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482068.1
CDS-3UTR CAA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCTCTGGCAGTGCCTTCTaGCCCTCTGTCAGTATTAAC +
Preference number: 5 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLSGSAF*PSVSIN
Trigger: GTTAATACTGACAGAGGGCAAGAAGGCACTGCCAGA...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGAGTGTGGCCGACCTCTaGACTACCTTCTCACCATCA +
Preference number: 5 (lower is better)
Translates to: WLTLLLDYASGQITQEVESVADL*TTFSPS
Trigger: TGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACACT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
CDS-3UTR CAA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCAGTATCGTCTATATaGAGGAGGTCCCCAAAGCGC +
Preference number: 5 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGAVSSI*RRSPKR
Trigger: GCGCTTTGGGGACCTCCTCAATATAGACGATACTGC...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000634504.1
CDS-3UTR CAA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAACAGTGGCACTGCGACTaGGGGAGGAGGAGAAAGGCA +
Preference number: 5 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEQWHCD*GRRRKA
Trigger: TGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACTG...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCAGTGGCACTGCGACTaGGGGAGGAGGAGAAAGGCA +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNQWHCD*GRRRKA
Trigger: TGCCTTTCTCCTCCTCCCCAAGTCGCAGTGCCACTG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CAA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTCTCTCCTCAGGGGTGTaGAGATCTGAGAGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFLSSGV*RSESLC
Trigger: ACAGAGACTCTCAGATCTCAACACCCCTGAGGAGAG...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCTCTTCGCTGCTGGGCTaGAGGTTGCTGGCTCCCACC +
Preference number: 5 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSSSLLG*RLLAPT
Trigger: GGTGGGAGCCAGCAACCTCAAGCCCAGCAGCGAAGA...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371246.6
CDS-3UTR CAA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTGAGCTCATCTTTTCGTaGGTCAGAACGGAAGACTTG +
Preference number: 5 (lower is better)
Translates to: VSVSPITSEFLVGREWVIELIFS*VRTEDL
Trigger: CAAGTCTTCCGTTCTGACCAACGAAAAGATGAGCTC...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306402.10
ENST00000371249.6
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAGTTGCATTCTTGGGCTaGAAGCCTTCAGGCTCAATG +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAEVAFLG*KPSGSM
Trigger: CATTGAGCCTGAAGGCTTCAAGCCCAAGAATGCAAC...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGTCTTGTTGCATTCTaGGGCTTGAAGCCTTCAGGC +
Preference number: 5 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGGLVAF*GLKPSG
Trigger: GCCTGAAGGCTTCAAGCCCAAGAATGCAACAAGACC...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTTGTCTAGGGACAGTCTaGGTAGCTCAGACTGACCTC +
Preference number: 5 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLCLGTV*VAQTDL
Trigger: GAGGTCAGTCTGAGCTACCAAGACTGTCCCTAGACA...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACTCCTATTTGTGAGCTaGGATGTGTATCTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAELLFVS*DVYLWG
Trigger: CCCCCACAGATACACATCCAAGCTCACAAATAGGAG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTCCCTACCACCTAGAATaGCTACTCCTATTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: VSVSPITSEFLVGREWVIPYHLE*LLLFVS
Trigger: GCTCACAAATAGGAGTAGCAATTCTAGGTGGTAGGG...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTCCCTACCACCTAGAATaGCTACTCCTATTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGPYHLE*LLLFVS
Trigger: GCTCACAAATAGGAGTAGCAATTCTAGGTGGTAGGG...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTATGCTGCCGTGCAAATaGCACGTGCATATGCATTTT +
Preference number: 5 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAMLPCK*HVHMHF
Trigger: AAAATGCATATGCACGTGCAATTTGCACGGCAGCAT...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGATGGAAAACTGTGGGCTaGCAGTGGCACTGCGACTTG +
Preference number: 5 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRWKTVG*QWHCDL
Trigger: CAAGTCGCAGTGCCACTGCAAGCCCACAGTTTTCCA...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR CAA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTGGTGCCAGTTCACTTaGTGGGTTGTTGTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGWCQFT*WVVVPV
Trigger: GACAGGAACAACAACCCACAAAGTGAACTGGCACCA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGTCTTCGCTGCTGGGCTaGAGGTTGCACATAGCTCTT +
Preference number: 5 (lower is better)
Translates to: WLTLLLDYASGQITQEVESSLLG*RLHIAL
Trigger: AAGAGCTATGTGCAACCTCAAGCCCAGCAGCGAAGA...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAACAGGGCCTAACGCATaGCTAGTGTTAAACGTTCGG +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAETGPNA*LVLNVR
Trigger: CCGAACGTTTAACACTAGCAATGCGTTAGGCCCTGT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGAAGAGACGGTGTGCTaGGGGATGTGTTCCGAGCCC +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNEETVC*GMCSEP
Trigger: GGGCTCGGAACACATCCCCAAGCACACCGTCTCTTC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGGTGTGGGAGACTaGCTCAGCCTTCCGGACAGG +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNTGVGD*LSLPDR
Trigger: CCTGTCCGGAAGGCTGAGCAAGTCTCCCACACCTGT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCCATATTGCTACATGTaGGGGAAGCATAGACCCCAC +
Preference number: 5 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGPYCYM*GKHRPH
Trigger: GTGGGGTCTATGCTTCCCCAACATGTAGCAATATGG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 90 bp TGCCAGTTCACTTTGTGGGTTGTTGTTCCTGTCCAGGCTGTGGTCTaGGTATGGCACGGAGTTTCCATTATTAATGGCCCTTGGGTAGTC +
Preference number: 5 (lower is better)
Translates to: CQFTLWVVVPVQAVV*VWHGVSIINGPWVV
Trigger: GACTACCCAAGGGCCATTAATAATGGAAACTCCGTGCCATACTCAGACCACAGCCTGGACAGGAACAACAACCCACAAAGTGAACTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371228.2
ENST00000607232.5
CDS GCA 90 bp GGAATGACGCCTGTGTGGCGTCGAGCTGCAATATCAGCCTCTTCTTaGTCGCGTTTAAGTCGTCTCTGGTCCGCTAAAAGTTTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: GMTPVWRRAAISASS*SRLSRLWSAKSFSL
Trigger: TAAAGAGAAACTTTTAGCGGACCAGAGACGACTTAAACGCGAGCAAGAAGAGGCTGATATTGCAGCTCGACGCCACACAGGCGTCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000474353.6
ENST00000607232.5
ENST00000634504.1
CDS GCA 90 bp TTCTCCATATTCCAAAACCTGCACTGGTGTCAACTTTTTGGGCTGTaGCTTCTCAGCAGGAGGAAGAAGCTCGATGTAGGTGCGTGGGAA +
Preference number: 5 (lower is better)
Translates to: FSIFQNLHWCQLFGL*LLSRRKKLDVGAWE
Trigger: TTCCCACGCACCTACATCGAGCTTCTTCCTCCTGCTGAGAAGGCACAGCCCAAAAAGTTGACACCAGTGCAGGTTTTGGAATATGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CAA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTCCATTCATCACAGCTTaGGAACCACCATCACATTCA +
Preference number: 5 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGPFITA*EPPSHS
Trigger: TGAATGTGATGGTGGTTCCAAAGCTGTGATGAATGG...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGTAAAGGGTCGGCAGTaGCTTTGTCTTGCCCATTGC +
Preference number: 5 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIVKGRQ*LCLAHC
Trigger: GCAATGGGCAAGACAAAGCAACTGCCGACCCTTTAC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATTGGTTTGCTTTCGTGTaGCCGGGTTTCCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: TTLVTTVCVILELLQGVDWFAFV*PGFLRA
Trigger: AGCCCTCAGGAAACCCGGCAACACGAAAGCAAACCA...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGGCTCCAGACCTGGTTaGCTTTCGTGTTGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNGSRPG*LSCCRV
Trigger: AACCCGGCAACACGAAAGCAAACCAGGTCTGGAGCC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CAA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCCGACTCATCTTTTCGTaGGTCAGAACGGAAGACTTG +
Preference number: 5 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLRLIFS*VRTEDL
Trigger: CAAGTCTTCCGTTCTGACCAACGAAAAGATGAGTCG...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTAATATCAGCCTCTTCTaGCTCGCGTTTAAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGNISLF*LAFKSS
Trigger: AGACGACTTAAACGCGAGCAAGAAGAGGCTGATATT...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACATGGTGGGAAGATGCATaGGTCCAGGAGCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTWWEDA*VQELWA
Trigger: TGCCCAGAGCTCCTGGACCAATGCATCTTCCCACCA...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CAA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTGTTGCATTCTTGGGCTaGAAGCCTTCAGGCTCAATG +
Preference number: 5 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFVAFLG*KPSGSM
Trigger: CATTGAGCCTGAAGGCTTCAAGCCCAAGAATGCAAC...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTAGTTGCATTCTTGGGCTaGAAGCCTTCAGGCTCAATG +
Preference number: 5 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLVAFLG*KPSGSM
Trigger: CATTGAGCCTGAAGGCTTCAAGCCCAAGAATGCAAC...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGTTGCATTCTTGGGCTaGAAGCCTTCAGGCTCAATG +
Preference number: 5 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLVAFLG*KPSGSM
Trigger: CATTGAGCCTGAAGGCTTCAAGCCCAAGAATGCAAC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAGGTCTTGTTGCATTCTaGGGCTTGAAGCCTTCAGGC +
Preference number: 5 (lower is better)
Translates to: SQYSPQSVKCCRANCTCIGLVAF*GLKPSG
Trigger: GCCTGAAGGCTTCAAGCCCAAGAATGCAACAAGACC...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGATCAGGTGCCTCAGTTTaGCCTCTGTTTCCCCATCCA +
Preference number: 5 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRSGASV*PLFPHP
Trigger: TGGATGGGGAAACAGAGGCAAAACTGAGGCACCTGA...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCTGGTAGTGGCAGAATaGCTGCTTCAGTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLLVVAE*LLQSEE
Trigger: CTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCTGGTAGTGGCAGAATaGCTGCTTCAGTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: WLTLLLDYASGQITQEVELVVAE*LLQSEE
Trigger: CTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTGCGTTTCTCTCTGAACATCAGGGCAGTCAATGGCACTGCTGCACAGCAGGCTGGGTCATTTCTGTATTaGTCTCACTCAGGATCTAAG +
Preference number: 5 (lower is better)
Translates to: VRFSLNIRAVNGTAAQQAGSFLY*SHSGSK
Trigger: CTTAGATCCTGAGTGAGACAAATACAGAAATGACCC...AGCCTGCTGTGCAGCAGTGCCATTGACTGCCCTGATGTTCAGAGAGAAACGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCTCCTATTTGTGAGCTaGGATGTGTATCTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: WLTLLLDYASGQITQEVELLFVS*DVYLWG
Trigger: CCCCCACAGATACACATCCAAGCTCACAAATAGGAG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTCTCCTATTTGTGAGCTaGGATGTGTATCTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLLLFVS*DVYLWG
Trigger: CCCCCACAGATACACATCCAAGCTCACAAATAGGAG...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTGTACTCCCCTACCACCTAGAATaGCTACTCCTATTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: VVAELLLQSEEKPCQGVLPYHLE*LLLFVS
Trigger: GCTCACAAATAGGAGTAGCAATTCTAGGTGGTAGGG...GAGTACACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTGCTGAGGCACAGGCATaGAAAACAAATTTTGCCTAC +
Preference number: 5 (lower is better)
Translates to: VSVSPITSEFLVGREWVIAEAQA*KTNFAY
Trigger: GTAGGCAAAATTTGTTTTCAATGCCTGTGCCTCAGC...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTATGCTGCCGTGCAAATaGCACGTGCATATGCATTTT +
Preference number: 5 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGMLPCK*HVHMHF
Trigger: AAAATGCATATGCACGTGCAATTTGCACGGCAGCAT...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGCTGACAGGGGCTTCTaGTGCTTACACACAGGGCCT +
Preference number: 5 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTADRGF*CLHTGP
Trigger: AGGCCCTGTGTGTAAGCACAAGAAGCCCCTGTCAGC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTGTCAGTGGAGATATTaGAACAGCGGTCCACGTCAT +
Preference number: 5 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGCQWRY*NSGPRH
Trigger: ATGACGTGGACCGCTGTTCAAATATCTCCACTGACA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAACCATTCATCACAGCTTaGGAACCACCATCACATTCA +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAEPFITA*EPPSHS
Trigger: TGAATGTGATGGTGGTTCCAAAGCTGTGATGAATGG...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CAA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATGTAAAGGGTCGGCAGTaGCTTTGTCTTGCCCATTGC +
Preference number: 5 (lower is better)
Translates to: TTLVTTVCVILELLQGVDVKGRQ*LCLAHC
Trigger: GCAATGGGCAAGACAAAGCAACTGCCGACCCTTTAC...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACTGGTTTGCTTTCGTGTaGCCGGGTTTCCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNWFAFV*PGFLRA
Trigger: AGCCCTCAGGAAACCCGGCAACACGAAAGCAAACCA...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CAA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCTGGGTTTTTCCTGGGTaGGTGCTGAGTCCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLWVFPG*VLSPAL
Trigger: GAGAGCAGGACTCAGCACCAACCCAGGAAAAACCCA...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAATGGGTTTTTCCTGGGTaGGTGCTGAGTCCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEWVFPG*VLSPAL
Trigger: GAGAGCAGGACTCAGCACCAACCCAGGAAAAACCCA...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACTGGGTTTTTCCTGGGTaGGTGCTGAGTCCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNWVFPG*VLSPAL
Trigger: GAGAGCAGGACTCAGCACCAACCCAGGAAAAACCCA...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CAA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTACGACTCATCTTTTCGTaGGTCAGAACGGAAGACTTG +
Preference number: 5 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLRLIFS*VRTEDL
Trigger: CAAGTCTTCCGTTCTGACCAACGAAAAGATGAGTCG...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCGACTCATCTTTTCGTaGGTCAGAACGGAAGACTTG +
Preference number: 5 (lower is better)
Translates to: WLTLLLDYASGQITQEVERLIFS*VRTEDL
Trigger: CAAGTCTTCCGTTCTGACCAACGAAAAGATGAGTCG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000634504.1
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAATATCAGCCTCTTCTaGCTCGCGTTTAAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAENISLF*LAFKSS
Trigger: AGACGACTTAAACGCGAGCAAGAAGAGGCTGATATT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CAA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATATGCTTTCCTCTCATATaGTCCACTCTCTTCGCGCCA +
Preference number: 5 (lower is better)
Translates to: SQYSPQSVKCCRANCTCICFPLI*STLFAP
Trigger: TGGCGCGAAGAGAGTGGACAATATGAGAGGAAAGCA...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp CTGCTGGTAGTGGCAGAATTGCTGCTTCAGTCTGAAGAGAAGCCTTGCCAGGGTACTGCTTTGTCCTTCTaGAAGTACCAACAAACCATC +
Preference number: 5 (lower is better)
Translates to: LLVVAELLLQSEEKPCQGTALSF*KYQQTI
Trigger: GATGGTTTGTTGGTACTTCAAGAAGGACAAAGCAGT...ACCCTGGCAAGGCTTCTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACATGGGGGACTCCACCTTaGTCTAGGGACAGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTWGTPP*SRDSLG
Trigger: ACCAAGACTGTCCCTAGACAAAGGTGGAGTCCCCCA...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATTCAGGTGCCTCAGTTTaGCCTCTGTTTCCCCATCCA +
Preference number: 5 (lower is better)
Translates to: TTLVTTVCVILELLQGVDSGASV*PLFPHP
Trigger: TGGATGGGGAAACAGAGGCAAAACTGAGGCACCTGA...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATACTGGTAGTGGCAGAATaGCTGCTTCAGTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: SQYSPQSVKCCRANCTCILVVAE*LLQSEE
Trigger: CTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAG...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAGAACAGACGTCCTGGTaGCTGCTGGTAGTGGCAGAA +
Preference number: 5 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEEQTSW*LLVVAE
Trigger: TTCTGCCACTACCAGCAGCAACCAGGACGTCTGTTC...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACTCTTTGTCTTGCCCATaGCTGCCAGGTGCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNSLSCP*LPGAKP
Trigger: TGGCTTGGCACCTGGCAGCAATGGGCAAGACAAAGA...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CAA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGCAGAGGCTGAGATCTTaGTCTAGATTAGTCGGTTTC +
Preference number: 5 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGQRLRS*SRLVGF
Trigger: GAAACCGACTAATCTAGACAAAGATCTCAGCCTCTG...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAGGATCTCGATTGTGTaGCAAGAGCACAATAGTAGG +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAERISIV*QEHNSR
Trigger: CCTACTATTGTGCTCTTGCAACACAATCGAGATCCT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGACAGGATCTCGATaGTGTTGCAAGAGCACAATA +
Preference number: 5 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGETGSR*CCKSTI
Trigger: TATTGTGCTCTTGCAACACAATCGAGATCCTGTCTC...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACTGGGATGGAGCTTGGTaGACTCAAGTAGGGACTCGG +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNWDGAW*TQVGTR
Trigger: CCGAGTCCCTACTTGAGTCAACCAAGCTCCATCCCA...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 90 bp GCAGGTTCTCAATGCTCCCTCCCACTTGGAGGGGGAGGCCTCTTTTaGAATCATTTAAAGAACCAGAAACACAAAGGTTCTCACAGCTTT +
Preference number: 5 (lower is better)
Translates to: AGSQCSLPLGGGGLF*NHLKNQKHKGSHSF
Trigger: AAAGCTGTGAGAACCTTTGTGTTTCTGGTTCTTTAAATGATTCCAAAAGAGGCCTCCCCCTCCAAGTGGGAGGGAGCATTGAGAACCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGCCATTCATCACAGCTTaGGAACCACCATCACATTCA +
Preference number: 5 (lower is better)
Translates to: WLTLLLDYASGQITQEVEPFITA*EPPSHS
Trigger: TGAATGTGATGGTGGTTCCAAAGCTGTGATGAATGG...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTCCATTCATCACAGCTTaGGAACCACCATCACATTCA +
Preference number: 5 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIPFITA*EPPSHS
Trigger: TGAATGTGATGGTGGTTCCAAAGCTGTGATGAATGG...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAGTGGCATCCTGGGACTaGTCAGAAGGAAGGTTGGGA +
Preference number: 5 (lower is better)
Translates to: LEIYKCVRLASYANVALQVASWD*SEGRLG
Trigger: TCCCAACCTTCCTTCTGACAAGTCCCAGGATGCCAC...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTAGCACAATAGTAGGATaGACAATCGTTGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: RQPGVPYTTLPPRIATPISTIVG*TIVVEG
Trigger: TCCCTCCACAACGATTGTCAATCCTACTATTGTGCT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCTGTTCTCGATTGTGTaGCAAGAGCACAATAGTAGG +
Preference number: 5 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATLFSIV*QEHNSR
Trigger: CCTACTATTGTGCTCTTGCAACACAATCGAGAACAG...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTCTGTTCTCGATTGTGTaGCAAGAGCACAATAGTAGG +
Preference number: 5 (lower is better)
Translates to: RQPGVPYTTLPPRIATPILFSIV*QEHNSR
Trigger: CCTACTATTGTGCTCTTGCAACACAATCGAGAACAG...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTTGTCTCTTCGGAAGTTaGCTGGATTTCAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: RQPGVPYTTLPPRIATPICLFGS*LDFRKF
Trigger: GAACTTCCTGAAATCCAGCAAACTTCCGAAGAGACA...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371246.6
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACAGTGTGGCCGACCTCTaGACTACCTTCTCACCATCA +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNSVADL*TTFSPS
Trigger: TGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACACT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CAA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTAATATCAGCCTCTTCTaGCTCGCGTTTAAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: RQPGVPYTTLPPRIATPINISLF*LAFKSS
Trigger: AGACGACTTAAACGCGAGCAAGAAGAGGCTGATATT...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGAATATCAGCCTCTTCTaGCTCGCGTTTAAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: WLTLLLDYASGQITQEVENISLF*LAFKSS
Trigger: AGACGACTTAAACGCGAGCAAGAAGAGGCTGATATT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000634504.1
CDS-3UTR CAA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCGCAGTATCGTCTATATaGAGGAGGTCCCCAAAGCGC +
Preference number: 5 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLAVSSI*RRSPKR
Trigger: GCGCTTTGGGGACCTCCTCAATATAGACGATACTGC...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGCAGTATCGTCTATATaGAGGAGGTCCCCAAAGCGC +
Preference number: 5 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTAVSSI*RRSPKR
Trigger: GCGCTTTGGGGACCTCCTCAATATAGACGATACTGC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CAA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTGCTTTAAAGTCAAATTaGGCTCTGGCAGGTCTCATC +
Preference number: 5 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIALKSN*ALAGLI
Trigger: GATGAGACCTGCCAGAGCCAAATTTGACTTTAAAGC...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGCTTTAAAGTCAAATTaGGCTCTGGCAGGTCTCATC +
Preference number: 5 (lower is better)
Translates to: WLTLLLDYASGQITQEVEALKSN*ALAGLI
Trigger: GATGAGACCTGCCAGAGCCAAATTTGACTTTAAAGC...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAACTGCTTTGTCCTTCTaGAAGTACCAACAAACCATC +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAETALSF*KYQQTI
Trigger: GATGGTTTGTTGGTACTTCAAGAAGGACAAAGCAGT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CAA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTAAGTACCAAACTGCTTaGTCCTTCTTGAAGTACCAA +
Preference number: 5 (lower is better)
Translates to: VSVSPITSEFLVGREWVIKYQTA*SFLKYQ
Trigger: TTGGTACTTCAAGAAGGACAAAGCAGTTTGGTACTT...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCTGGAATCCTGGGACTaGTCAGAAGGAAGGTTGGGA +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNLESWD*SEGRLG
Trigger: TCCCAACCTTCCTTCTGACAAGTCCCAGGATTCCAG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306402.10
ENST00000607232.5
CDS-3UTR CAA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGTTGCTTCAATTCTTTTaGCTCAGCACACTAGTTCGG +
Preference number: 5 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGLLQFF*LSTLVR
Trigger: CCGAACTAGTGTGCTGAGCAAAAAGAATTGAAGCAA...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CAA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAGGTCTTGTTGCATTCTaGGGCTTGAAGCCTTCAGGC +
Preference number: 5 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEGLVAF*GLKPSG
Trigger: GCCTGAAGGCTTCAAGCCCAAGAATGCAACAAGACC...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTGTCAGTCTCCCCAATCACCTCTGAGTTTCTGGTGGGCAGGGAATGGGTCATTATAAACATCCTTGAATaGGACAGAGTTGTGACCAAG +
Preference number: 5 (lower is better)
Translates to: VSVSPITSEFLVGREWVIINILE*DRVVTK
Trigger: CTTGGTCACAACTCTGTCCAATTCAAGGATGTTTAT...AATGACCCATTCCCTGCCCACCAGAAACTCAGAGGTGATTGGGGAGACTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTGCTGAGGCACAGGCATaGAAAACAAATTTTGCCTAC +
Preference number: 5 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFAEAQA*KTNFAY
Trigger: GTAGGCAAAATTTGTTTTCAATGCCTGTGCCTCAGC...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGCTGAGGCACAGGCATaGAAAACAAATTTTGCCTAC +
Preference number: 5 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATAEAQA*KTNFAY
Trigger: GTAGGCAAAATTTGTTTTCAATGCCTGTGCCTCAGC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp AGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTCCTATTGCTGAGGCACAGGCATaGAAAACAAATTTTGCCTAC +
Preference number: 5 (lower is better)
Translates to: RQPGVPYTTLPPRIATPIAEAQA*KTNFAY
Trigger: GTAGGCAAAATTTGTTTTCAATGCCTGTGCCTCAGC...AATAGGAGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAATGCTGCCGTGCAAATaGCACGTGCATATGCATTTT +
Preference number: 5 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGMLPCK*HVHMHF
Trigger: AAAATGCATATGCACGTGCAATTTGCACGGCAGCAT...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGATATATCAAAATGTGTaGCAAGGCATGCCGCCAGTT +
Preference number: 5 (lower is better)
Translates to: ANSAPGLCFRSDYPRSGGIYQNV*QGMPPV
Trigger: AACTGGCGGCATGCCTTGCAACACATTTTGATATAT...CCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAGTGCCCTTGCACTTGTaGAGGCGATGTTTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTVPLHL*RRCLGK
Trigger: TTTCCCCAAACATCGCCTCAACAAGTGCAAGGGCAC...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTATGTTTATGATCTCATaGCAAACCGCTTCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFMFMIS*QTASCG
Trigger: CCCACAGGAAGCGGTTTGCAATGAGATCATAAACAT...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649911.1
CDS TCA 90 bp TTGTCTCTCATTCTCCAAGCTAGTGAGATCCCCAGGAGCCCCGTCTaGTTCCCTCTTCACTGCATGGAAGTTGGAAGAATATATATATCC +
Preference number: 5 (lower is better)
Translates to: LSLILQASEIPRSPV*FPLHCMEVGRIYIS
Trigger: GGATATATATATTCTTCCAACTTCCATGCAGTGAAGAGGGAATCAGACGGGGCTCCTGGGGATCTCACTAGCTTGGAGAATGAGAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
ENST00000607232.5
ENST00000634504.1
CDS GCA 90 bp GGCTTATATCCCGACTCATCTTTTCGTTGGTCAGAACGGAAGACTTaGCAGGCTGATATTCGTAAATGCTCTTGGGCTCTGCACGATATT +
Preference number: 5 (lower is better)
Translates to: GLYPDSSFRWSERKT*QADIRKCSWALHDI
Trigger: AATATCGTGCAGAGCCCAAGAGCATTTACGAATATCAGCCTGGCAAGTCTTCCGTTCTGACCAACGAAAAGATGAGTCGGGATATAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000277982.9
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CAA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATGGCAGTTGCTTTGTCTaGCCCATTGCTGCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: YIKMCCKACRQLVALAINGSCFV*PIAARC
Trigger: GCACCTGGCAGCAATGGGCAAGACAAAGCAACTGCC...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATGGCTCCAGACCTGGTTaGCTTTCGTGTTGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: YIKMCCKACRQLVALAINGSRPG*LSCCRV
Trigger: AACCCGGCAACACGAAAGCAAACCAGGTCTGGAGCC...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp AGCCAATACAGTCCACAATCGGTGAAATGCTGCCGTGCAAATTGCACGTGCATAAGCACAATAGTAGGATaGACAATCGTTGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: SQYSPQSVKCCRANCTCISTIVG*TIVVEG
Trigger: TCCCTCCACAACGATTGTCAATCCTACTATTGTGCT...TATGCACGTGCAATTTGCACGGCAGCATTTCACCGATTGTGGACTGTATTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAGCTACTGAGTCGTTTTaGCTGTTCTCGATTGTGTTG +
Preference number: 5 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRATESF*LFSIVL
Trigger: CAACACAATCGAGAACAGCAAAAACGACTCAGTAGC...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAACTCTCCTCAGGGGTGTaGAGATCTGAGAGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: LEIYKCVRLASYANVALQLSSGV*RSESLC
Trigger: ACAGAGACTCTCAGATCTCAACACCCCTGAGGAGAG...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp TATCTGCTTGGCCATCTGCTCCCCAATTCTCATGGGCAAACCTTGTGTGCGTTTACTGCTTTGTCCTTCTaGAAGTACCAACAAACCATC +
Preference number: 5 (lower is better)
Translates to: YLLGHLLPNSHGQTLCAFTALSF*KYQQTI
Trigger: GATGGTTTGTTGGTACTTCAAGAAGGACAAAGCAGT...AAACGCACACAAGGTTTGCCCATGAGAATTGGGGAGCAGATGGCCAAGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGACTGCTTTGTCCTTCTaGAAGTACCAACAAACCATC +
Preference number: 5 (lower is better)
Translates to: WLTLLLDYASGQITQEVETALSF*KYQQTI
Trigger: GATGGTTTGTTGGTACTTCAAGAAGGACAAAGCAGT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CAA 90 bp GACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGAGGGGAAAGGCTGAAAAGTACCAAACTGCTTaGTCCTTCTTGAAGTACCAA +
Preference number: 5 (lower is better)
Translates to: DYASGQITQEVEGRGKAEKYQTA*SFLKYQ
Trigger: TTGGTACTTCAAGAAGGACAAAGCAGTTTGGTACTT...TTCAGCCTTTCCCCTCCCCTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CAA 90 bp CTGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGATTGCTTCAATTCTTTTaGCTCAGCACACTAGTTCGG +
Preference number: 5 (lower is better)
Translates to: LANSAPGLCFRSDYPRSGLLQFF*LSTLVR
Trigger: CCGAACTAGTGTGCTGAGCAAAAAGAATTGAAGCAA...TCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CAA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGTTGCTTCAATTCTTTTaGCTCAGCACACTAGTTCGG +
Preference number: 5 (lower is better)
Translates to: WLTLLLDYASGQITQEVELLQFF*LSTLVR
Trigger: CCGAACTAGTGTGCTGAGCAAAAAGAATTGAAGCAA...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CAA 90 bp GAGACTGCAAAAGATAAGGAGTTTGGGGCTTGCCTTTACCCGGAAGCATGGCTATTGCTTCAATTCTTTTaGCTCAGCACACTAGTTCGG +
Preference number: 5 (lower is better)
Translates to: ETAKDKEFGACLYPEAWLLLQFF*LSTLVR
Trigger: CCGAACTAGTGTGCTGAGCAAAAAGAATTGAAGCAA...TAGCCATGCTTCCGGGTAAAGGCAAGCCCCAAACTCCTTATCTTTTGCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAATGTCTAGGGACAGTCTaGGTAGCTCAGACTGACCTC +
Preference number: 5 (lower is better)
Translates to: LEIYKCVRLASYANVALQCLGTV*VAQTDL
Trigger: GAGGTCAGTCTGAGCTACCAAGACTGTCCCTAGACA...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACCTGGTAGTGGCAGAATaGCTGCTTCAGTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNLVVAE*LLQSEE
Trigger: CTCTTCAGACTGAAGCAGCAATTCTGCCACTACCAG...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp ATATGCAGACAGCCAGGGGTTCCGTACACAACCCTACCACCTAGAATTGCTACTGGGTCATTTCTGTATTaGTCTCACTCAGGATCTAAG +
Preference number: 5 (lower is better)
Translates to: ICRQPGVPYTTLPPRIATGSFLY*SHSGSK
Trigger: CTTAGATCCTGAGTGAGACAAATACAGAAATGACCC...AGTAGCAATTCTAGGTGGTAGGGTTGTGTACGGAACCCCTGGCTGTCTGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp TTCAGGAAGTCTCCTTCTACCCAGAAAGCTCACCCCCTCCAGTTCCATAACCTTGGGTCATTTCTGTATTaGTCTCACTCAGGATCTAAG +
Preference number: 5 (lower is better)
Translates to: FRKSPSTQKAHPLQFHNLGSFLY*SHSGSK
Trigger: CTTAGATCCTGAGTGAGACAAATACAGAAATGACCC...AAGGTTATGGAACTGGAGGGGGTGAGCTTTCTGGGTAGAAGGAGACTTCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGGGGTCATTTCTGTATTaGTCTCACTCAGGATCTAAG +
Preference number: 5 (lower is better)
Translates to: WLTLLLDYASGQITQEVEGSFLY*SHSGSK
Trigger: CTTAGATCCTGAGTGAGACAAATACAGAAATGACCC...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCCTCCTATTTGTGAGCTaGGATGTGTATCTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLLLFVS*DVYLWG
Trigger: CCCCCACAGATACACATCCAAGCTCACAAATAGGAG...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp TGGCTAACTCTGCTCCTGGACTATGCTTCAGGTCAGATTACCCAAGAAGTGGAGATATATCAAAATGTGTaGCAAGGCATGCCGCCAGTT +
Preference number: 5 (lower is better)
Translates to: WLTLLLDYASGQITQEVEIYQNV*QGMPPV
Trigger: AACTGGCGGCATGCCTTGCAACACATTTTGATATAT...CTCCACTTCTTGGGTAATCTGACCTGAAGCATAGTCCAGGAGCAGAGTTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGCATGGTGTGCCATATaGCTACATGTTGGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNAWCAI*LHVGEA
Trigger: TGCTTCCCCAACATGTAGCAATATGGCACACCATGC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 90 bp CTGAACTGCTCTGAGAGCTCTAGTCATCAGAAATATTCTGCGGGATaGCAAGAAGATGAAAACTCTCTGCCTGGGGTTTACTCTGTACCA +
Preference number: 5 (lower is better)
Translates to: LNCSESSSHQKYSAG*QEDENSLPGVYSVP
Trigger: TGGTACAGAGTAAACCCCAGGCAGAGAGTTTTCATCTTCTTGTCATCCCGCAGAATATTTCTGATGACTAGAGCTCTCAGAGCAGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492542.1
CDS-3UTR CAA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATCCATTCATCACAGCTTaGGAACCACCATCACATTCA +
Preference number: 5 (lower is better)
Translates to: TTLVTTVCVILELLQGVDPFITA*EPPSHS
Trigger: TGAATGTGATGGTGGTTCCAAAGCTGTGATGAATGG...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACACGACTCATCTTTTCGTaGGTCAGAACGGAAGACTTG +
Preference number: 5 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTRLIFS*VRTEDL
Trigger: CAAGTCTTCCGTTCTGACCAACGAAAAGATGAGTCG...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CAA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATGCTTTAAAGTCAAATTaGGCTCTGGCAGGTCTCATC +
Preference number: 5 (lower is better)
Translates to: TTLVTTVCVILELLQGVDALKSN*ALAGLI
Trigger: GATGAGACCTGCCAGAGCCAAATTTGACTTTAAAGC...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCACTGGAATCCTGGGACTaGTCAGAAGGAAGGTTGGGA +
Preference number: 5 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDALESWD*SEGRLG
Trigger: TCCCAACCTTCCTTCTGACAAGTCCCAGGATTCCAG...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306402.10
CDS-3UTR CAA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCATGTCTAGGGACAGTCTaGGTAGCTCAGACTGACCTC +
Preference number: 5 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDACLGTV*VAQTDL
Trigger: GAGGTCAGTCTGAGCTACCAAGACTGTCCCTAGACA...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAATCTTCGCTGCTGGGCTaGAGGTTGCTGAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: LEIYKCVRLASYANVALQSSLLG*RLLRND
Trigger: ATCATTTCTCAGCAACCTCAAGCCCAGCAGCGAAGA...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649911.1
CDS-3UTR CAA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATGTAAAGGGTCGGCAGTaGCTTTGTCTTGCCCATTGC +
Preference number: 5 (lower is better)
Translates to: YIKMCCKACRQLVALAINVKGRQ*LCLAHC
Trigger: GCAATGGGCAAGACAAAGCAACTGCCGACCCTTTAC...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAAGCACAATAGTAGGATaGACAATCGTTGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTSTIVG*TIVVEG
Trigger: TCCCTCCACAACGATTGTCAATCCTACTATTGTGCT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
CDS-3UTR CAA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAACTGTTCTCGATTGTGTaGCAAGAGCACAATAGTAGG +
Preference number: 5 (lower is better)
Translates to: PLGLRPCSVILKNKCLWELFSIV*QEHNSR
Trigger: CCTACTATTGTGCTCTTGCAACACAATCGAGAACAG...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCGCTACTGAGTCGTTTTaGCTGTTCTCGATTGTGTTG +
Preference number: 5 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLATESF*LFSIVL
Trigger: CAACACAATCGAGAACAGCAAAAACGACTCAGTAGC...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAGCTACTGAGTCGTTTTaGCTGTTCTCGATTGTGTTG +
Preference number: 5 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEATESF*LFSIVL
Trigger: CAACACAATCGAGAACAGCAAAAACGACTCAGTAGC...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp GGAGATGGCAATATGACAATGCTTTCTAGGATCCCTCCAGGGAAAATTCATCTCAATATCAGCCTCTTCTaGCTCGCGTTTAAGTCGTCT +
Preference number: 5 (lower is better)
Translates to: GDGNMTMLSRIPPGKIHLNISLF*LAFKSS
Trigger: AGACGACTTAAACGCGAGCAAGAAGAGGCTGATATT...GAGATGAATTTTCCCTGGAGGGATCCTAGAAAGCATTGTCATATTGCCATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACGCTTTAAAGTCAAATTaGGCTCTGGCAGGTCTCATC +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNALKSN*ALAGLI
Trigger: GATGAGACCTGCCAGAGCCAAATTTGACTTTAAAGC...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CAA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCATGCTTTCCTCTCATATaGTCCACTCTCTTCGCGCCA +
Preference number: 5 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDACFPLI*STLFAP
Trigger: TGGCGCGAAGAGAGTGGACAATATGAGAGGAAAGCA...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371227.8
ENST00000371246.6
CDS-3UTR CAA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATACTGCTTTGTCCTTCTaGAAGTACCAACAAACCATC +
Preference number: 5 (lower is better)
Translates to: TTLVTTVCVILELLQGVDTALSF*KYQQTI
Trigger: GATGGTTTGTTGGTACTTCAAGAAGGACAAAGCAGT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GCAGGGAATGGGTCATTTCTGTATTTGTCTCACTCAGGATCTAAGAGAGGCCGAAAGTACCAAACTGCTTaGTCCTTCTTGAAGTACCAA +
Preference number: 5 (lower is better)
Translates to: AGNGSFLYLSHSGSKRGRKYQTA*SFLKYQ
Trigger: TTGGTACTTCAAGAAGGACAAAGCAGTTTGGTACTT...TCGGCCTCTCTTAGATCCTGAGTGAGACAAATACAGAAATGACCCATTCCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp ACAACCCTGGTTACTACCGTTTGTGTGATCCTTGAACTCCTACAGGGAGTAGATATATATCAAAATGTGTaGCAAGGCATGCCGCCAGTT +
Preference number: 5 (lower is better)
Translates to: TTLVTTVCVILELLQGVDIYQNV*QGMPPV
Trigger: AACTGGCGGCATGCCTTGCAACACATTTTGATATAT...ATCTACTCCCTGTAGGAGTTCAAGGATCACACAAACGGTAGTAACCAGGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAAGCCTGGGTTTGAATTaGGATGGAAGGATTTCCGAA +
Preference number: 5 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTSLGLN*DGRISE
Trigger: TTCGGAAATCCTTCCATCCAAATTCAAACCCAGGCT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 90 bp CTCTATGTCAAGCTCCATAACAGGAACTTTTACACTCGATCCTACTaGACCCGAAGCCCTGTGAGTAGATTCACGTATTCCCATATTACA +
Preference number: 5 (lower is better)
Translates to: LYVKLHNRNFYTRSY*TRSPVSRFTYSHIT
Trigger: TGTAATATGGGAATACGTGAATCTACTCACAGGGCTTCGGGTTCAGTAGGATCGAGTGTAAAAGTTCCTGTTATGGAGCTTGACATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465489.1
CDS CCA 90 bp AAAGTTAAACTTAGCAATAGCTTCTCCATATTCCAAAACCTGCACTaGTGTCAACTTTTTGGGCTGTGCCTTCTCAGCAGGAGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: KVKLSNSFSIFQNLH*CQLFGLCLLSRRKK
Trigger: CTTCTTCCTCCTGCTGAGAAGGCACAGCCCAAAAAGTTGACACCAGTGCAGGTTTTGGAATATGGAGAAGCTATTGCTAAGTTTAACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
CDS-3UTR CAA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATTCTGGCAGTGCCTTCTaGCCCTCTGTCAGTATTAAC +
Preference number: 5 (lower is better)
Translates to: YIKMCCKACRQLVALAINSGSAF*PSVSIN
Trigger: GTTAATACTGACAGAGGGCAAGAAGGCACTGCCAGA...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCAGCACAATAGTAGGATaGACAATCGTTGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSSTIVG*TIVVEG
Trigger: TCCCTCCACAACGATTGTCAATCCTACTATTGTGCT...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAGCTACTGAGTCGTTTTaGCTGTTCTCGATTGTGTTG +
Preference number: 5 (lower is better)
Translates to: LEIYKCVRLASYANVALQATESF*LFSIVL
Trigger: CAACACAATCGAGAACAGCAAAAACGACTCAGTAGC...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp GTGTTCTATGAGAATAGGCCTCCCAATTCTAAACTGTCCCAGAAAAACACAAGCGCTTTAAAGTCAAATTaGGCTCTGGCAGGTCTCATC +
Preference number: 5 (lower is better)
Translates to: VFYENRPPNSKLSQKNTSALKSN*ALAGLI
Trigger: GATGAGACCTGCCAGAGCCAAATTTGACTTTAAAGC...GCTTGTGTTTTTCTGGGACAGTTTAGAATTGGGAGGCCTATTCTCATAGAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAGCTTTAAAGTCAAATTaGGCTCTGGCAGGTCTCATC +
Preference number: 5 (lower is better)
Translates to: LEIYKCVRLASYANVALQALKSN*ALAGLI
Trigger: GATGAGACCTGCCAGAGCCAAATTTGACTTTAAAGC...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACTGCTTTGTCCTTCTaGAAGTACCAACAAACCATC +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNTALSF*KYQQTI
Trigger: GATGGTTTGTTGGTACTTCAAGAAGGACAAAGCAGT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CAA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATCTCCTATTTGTGAGCTaGGATGTGTATCTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: YIKMCCKACRQLVALAINLLFVS*DVYLWG
Trigger: CCCCCACAGATACACATCCAAGCTCACAAATAGGAG...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAATGCTGCCGTGCAAATaGCACGTGCATATGCATTTT +
Preference number: 5 (lower is better)
Translates to: LEIYKCVRLASYANVALQMLPCK*HVHMHF
Trigger: AAAATGCATATGCACGTGCAATTTGCACGGCAGCAT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS TCA 90 bp TTGGAATCATTTAAAGAACCAGAAACACAAAGGTTCTCACAGCTTTaGGCCTTCTCTGAGGGCAAGAGGATACTCTTCTGTTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: LESFKEPETQRFSQL*AFSEGKRILFCSCK
Trigger: TTTGCAGGAACAGAAGAGTATCCTCTTGCCCTCAGAGAAGGCTCAAAGCTGTGAGAACCTTTGTGTTTCTGGTTCTTTAAATGATTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS-3UTR CAA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAAGCACAATAGTAGGATaGACAATCGTTGTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDASTIVG*TIVVEG
Trigger: TCCCTCCACAACGATTGTCAATCCTACTATTGTGCT...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
CDS-3UTR CAA 90 bp CTGGAGATATACAAATGCGTGAGGCTGGCATCATATGCAAATGTGGCTTTACAAACTGCTTTGTCCTTCTaGAAGTACCAACAAACCATC +
Preference number: 5 (lower is better)
Translates to: LEIYKCVRLASYANVALQTALSF*KYQQTI
Trigger: GATGGTTTGTTGGTACTTCAAGAAGGACAAAGCAGT...TTGTAAAGCCACATTTGCATATGATGCCAGCCTCACGCATTTGTATATCTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAAAGTACCAAACTGCTTaGTCCTTCTTGAAGTACCAA +
Preference number: 5 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTKYQTA*SFLKYQ
Trigger: TTGGTACTTCAAGAAGGACAAAGCAGTTTGGTACTT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACAAGTACCAAACTGCTTaGTCCTTCTTGAAGTACCAA +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNKYQTA*SFLKYQ
Trigger: TTGGTACTTCAAGAAGGACAAAGCAGTTTGGTACTT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS-3UTR CAA 90 bp GTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACACAATAAACATCCTTGAATaGGACAGAGTTGTGACCAAG +
Preference number: 5 (lower is better)
Translates to: VRPCLIHSNLRQAWVLNTINILE*DRVVTK
Trigger: CTTGGTCACAACTCTGTCCAATTCAAGGATGTTTAT...TGTGTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp CTAGTTCGGCCCTGTCTAATACACAGTAACCTTAGACAGGCTTGGGTTTTAAACATAAACATCCTTGAATaGGACAGAGTTGTGACCAAG +
Preference number: 5 (lower is better)
Translates to: LVRPCLIHSNLRQAWVLNINILE*DRVVTK
Trigger: CTTGGTCACAACTCTGTCCAATTCAAGGATGTTTAT...GTTTAAAACCCAAGCCTGTCTAAGGTTACTGTGTATTAGACAGGGCCGAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS TCA 90 bp ATAACAGGAACTTTTACACTCGATCCTACTGAACCCGAAGCCCTGTaGGTAGATTCACGTATTCCCATATTACAACTCGCAATGAAGTTA +
Preference number: 5 (lower is better)
Translates to: ITGTFTLDPTEPEAL*VDSRIPILQLAMKL
Trigger: TAACTTCATTGCGAGTTGTAATATGGGAATACGTGAATCTACTCACAGGGCTTCGGGTTCAGTAGGATCGAGTGTAAAAGTTCCTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465489.1
CDS-3UTR CAA 90 bp CCCTTGGGATTAAGGCCCTGCTCTGTCATACTTAAAAACAAATGTCTGTGGGAAGTGTCTCTGTTCAGTTaGTGGATCTGTTTAAACATA +
Preference number: 5 (lower is better)
Translates to: PLGLRPCSVILKNKCLWEVSLFS*WICLNI
Trigger: TATGTTTAAACAGATCCACAAACTGAACAGAGACAC...TTCCCACAGACATTTGTTTTTAAGTATGACAGAGCAGGGCCTTAATCCCAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371246.6
CDS-3UTR CAA 90 bp AATTGGAAATCTCTGTTTCTTGTTTCGTCATACATAGGAAGGCGACGTGATGCAATATATCAAAATGTGTaGCAAGGCATGCCGCCAGTT +
Preference number: 5 (lower is better)
Translates to: NWKSLFLVSSYIGRRRDAIYQNV*QGMPPV
Trigger: AACTGGCGGCATGCCTTGCAACACATTTTGATATAT...TGCATCACGTCGCCTTCCTATGTATGACGAAACAAGAAACAGAGATTTCCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS TCA 90 bp GAGAAACAGTGCTGCAGTAATGAACAGATTTTTCGGCAATGTTTATaGTCTCATTGCAAACCGCTTCCACATAGCTCTTTTCAGATTCTG +
Preference number: 5 (lower is better)
Translates to: EKQCCSNEQIFRQCL*SHCKPLPHSSFQIL
Trigger: CAGAATCTGAAAAGAGCTATGTGGAAGCGGTTTGCAATGAGATCATAAACATTGCCGAAAAATCTGTTCATTACTGCAGCACTGTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647619.1
CDS-3UTR CAA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATTTGCTTCAATTCTTTTaGCTCAGCACACTAGTTCGG +
Preference number: 5 (lower is better)
Translates to: YIKMCCKACRQLVALAINLLQFF*LSTLVR
Trigger: CCGAACTAGTGTGCTGAGCAAAAAGAATTGAAGCAA...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATATATATCAAAATGTGTaGCAAGGCATGCCGCCAGTT +
Preference number: 5 (lower is better)
Translates to: YIKMCCKACRQLVALAINIYQNV*QGMPPV
Trigger: AACTGGCGGCATGCCTTGCAACACATTTTGATATAT...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS-3UTR CAA 90 bp TATATCAAAATGTGTTGCAAGGCATGCCGCCAGTTAGTTGCACTTGCTATTAATAAGTACCAAACTGCTTaGTCCTTCTTGAAGTACCAA +
Preference number: 5 (lower is better)
Translates to: YIKMCCKACRQLVALAINKYQTA*SFLKYQ
Trigger: TTGGTACTTCAAGAAGGACAAAGCAGTTTGGTACTT...ATTAATAGCAAGTGCAACTAACTGGCGGCATGCCTTGCAACACATTTTGATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371249.6
ENST00000649911.1
CDS TCA 90 bp TCTATCTCAAGGGGAAAGAATGTAATCCAACTGCACAATGCATTCTaGTTAAAGAACATGGGCACGGTGAGACAAAATAACTTTAATATG +
Preference number: 5 (lower is better)
Translates to: SISRGKNVIQLHNAF*LKNMGTVRQNNFNM
Trigger: CATATTAAAGTTATTTTGTCTCACCGTGCCCATGTTCTTTAATCAGAATGCATTGTGCAGTTGGATTACATTCTTTCCCCTTGAGATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472854.5
CDS TCA 90 bp AATTTCCTCTCAGTGCGGCAAGTTCAGGATAATACCATGAGCTGGTaGGTACATAACTCACTATATTTAGTTCTTCTTTCGTGTTTATTA +
Preference number: 5 (lower is better)
Translates to: NFLSVRQVQDNTMSW*VHNSLYLVLLSCLL
Trigger: TAATAAACACGAAAGAAGAACTAAATATAGTGAGTTATGTACTCACCAGCTCATGGTATTATCCTGAACTTGCCGCACTGAGAGGAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492542.1
CDS GCA 72 bp GAGCCGGTGCTCGGGTGCCCGCAGCCTCCAAGGGAGTaGCTTCGGCAGGGTCACGTGCAACACGAGAGGAGT +
Preference number: 6 (lower is better)
Translates to: EPVLGCPQPPRE*LRQGHVQHERS
Trigger: ACTCCTCTCGTGTTGCACGTGACCCTGCCGAAGGCACTCCCTTGGAGGCTGCGGGCACCCGAGCACCGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474353.6
ENST00000486141.3
CDS CAA 90 bp CTGGGCAGAAAGCTTTCACGAACTCTTCCAAAGGATGCCAACTCCTaGCTGGTCGCCGGGCGGGCGGGCTGCGCGCGTCCGCCCCACTCG +
Preference number: 6 (lower is better)
Translates to: LGRKLSRTLPKDANS*LVAGRAGCARPPHS
Trigger: CGAGTGGGGCGGACGCGCGCAGCCCGCCCGCCCGGCGACCAGCAAGGAGTTGGCATCCTTTGGAAGAGTTCGTGAAAGCTTTCTGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
CDS TCA 72 bp CTGGGACCCCCACAGTCAGTGAGATCCACTCAGAGGTaGCAGCGTGCATCTCGGGGGACAGGGCTCGGCGGG +
Preference number: 6 (lower is better)
Translates to: LGPPQSVRSTQR*QRASRGTGLGG
Trigger: CCCGCCGAGCCCTGTCCCCCGAGATGCACGCTGTCACCTCTGAGTGGATCTCACTGACTGTGGGGGTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS TCA 72 bp GTCCTCCAGGGCCGTGGGTCTCTCCTGAGAGGGCTCTaGGCTGCGGCTAAGCCTGGCCATGGTGTGTCGGGA +
Preference number: 6 (lower is better)
Translates to: VLQGRGSLLRGL*AAAKPGHGVSG
Trigger: TCCCGACACACCATGGCCAGGCTTAGCCGCAGCTCAGAGCCCTCTCAGGAGAGACCCACGGCCCTGGAGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371228.2
ENST00000607232.5
CDS GCA 72 bp TGGCTCCCACCTCTCCGAGCAGCTTTCCTCCCCGCCTaGTCGCCACCTCTATGCCGCTCTGTCTGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: WLPPLRAAFLPA*SPPLCRSVCSA
Trigger: GGCTGAGCAGACAGAGCGGCATAGAGGTGGCGAGCAGGCGGGGAGGAAAGCTGCTCGGAGAGGTGGGAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277982.9
ENST00000361941.7
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000649575.1
CDS GCA 72 bp CAAGTAGGGACTCGGCCGAGCGGGCTGAGGTCAGGCTaGCCCGGGACAGCACAGGTGTGGGAGACTTGCTCA +
Preference number: 6 (lower is better)
Translates to: QVGTRPSGLRSG*PGTAQVWETCS
Trigger: TGAGCAAGTCTCCCACACCTGTGCTGTCCCGGGGCAGCCTGACCTCAGCCCGCTCGGCCGAGTCCCTACTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CAA 90 bp GAGTCGGGAAGGTCAGAGGTGAGGCGGCAGAGGCAGTCGCTGGGATaGTGGGGACGCAGCCAAGAGGCCCCAGAGGTGTTGGAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: ESGRSEVRRQRQSLG*WGRSQEAPEVLEVW
Trigger: CCAGACCTCCAACACCTCTGGGGCCTCTTGGCTGCGTCCCCACAATCCCAGCGACTGCCTCTGCCGCCTCACCTCTGACCTTCCCGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277982.9
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
CDS GCA 72 bp GAGGAGGCAAGGGTGGGGTCAGGGCCAGAGAACGCCTaGCTGGGACCCCCACAGTCAGTGAGATCCACTCAG +
Preference number: 6 (lower is better)
Translates to: EEARVGSGPENA*LGPPQSVRSTQ
Trigger: CTGAGTGGATCTCACTGACTGTGGGGGTCCCAGGCAGGCGTTCTCTGGCCCTGACCCCACCCTTGCCTCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS GCA 72 bp TCAGGCTGCCCCGGGACAGCACAGGTGTGGGAGACTTaGTCAGCCTTCCGGACAGGTCCAGGGATGGCATGG +
Preference number: 6 (lower is better)
Translates to: SGCPGTAQVWET*SAFRTGPGMAW
Trigger: CCATGCCATCCCTGGACCTGTCCGGAAGGCTGAGCAAGTCTCCCACACCTGTGCTGTCCCGGGGCAGCCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 72 bp ACCAGCGGAGGTGGTGGTGAGAAGGATGGTGGCGTCTaGCTAATGGGGGCAAAGGAGCCAGAGGCGCGGGCT +
Preference number: 6 (lower is better)
Translates to: TSGGGGEKDGGV*LMGAKEPEARA
Trigger: AGCCCGCGCCTCTGGCTCCTTTGCCCCCATTAGCCAGACGCCACCATCCTTCTCACCACCACCTCCGCTGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000277982.9
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
CDS CCA 72 bp CTAATGGGGGCAAAGGAGCCAGAGGCGCGGGCTGGCTaGCTGTGGTGGGGCCACCTCTGGGACTTGTCAGAA +
Preference number: 6 (lower is better)
Translates to: LMGAKEPEARAG*LWWGHLWDLSE
Trigger: TTCTGACAAGTCCCAGAGGTGGCCCCACCACAGCCAGCCAGCCCGCGCCTCTGGCTCCTTTGCCCCCATTAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371245.7
CDS CAA 72 bp AGGTCAGAGGTGAGGCGGCAGAGGCAGTCGCTGGGATaGTGGGGACGCAGCCAAGAGGCCCCAGAGGTGTTG +
Preference number: 6 (lower is better)
Translates to: RSEVRRQRQSLG*WGRSQEAPEVL
Trigger: CAACACCTCTGGGGCCTCTTGGCTGCGTCCCCACAATCCCAGCGACTGCCTCTGCCGCCTCACCTCTGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277982.9
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
CDS CAA 72 bp AAGCTTTCACGAACTCTTCCAAAGGATGCCAACTCCTaGCTGGTCGCCGGGCGGGCGGGCTGCGCGCGTCCG +
Preference number: 6 (lower is better)
Translates to: KLSRTLPKDANS*LVAGRAGCARP
Trigger: CGGACGCGCGCAGCCCGCCCGCCCGGCGACCAGCAAGGAGTTGGCATCCTTTGGAAGAGTTCGTGAAAGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
CDS CAA 72 bp GTCAGGCTGCCCCGGGACAGCACAGGTGTGGGAGACTaGCTCAGCCTTCCGGACAGGTCCAGGGATGGCATG +
Preference number: 6 (lower is better)
Translates to: VRLPRDSTGVGD*LSLPDRSRDGM
Trigger: CATGCCATCCCTGGACCTGTCCGGAAGGCTGAGCAAGTCTCCCACACCTGTGCTGTCCCGGGGCAGCCTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS GCA 72 bp CTCCCCGCCTGCTCGCCACCTCTATGCCGCTCTGTCTaGTCAGCCTCACTTCCTGGAAAAGCGCTACCCAGG +
Preference number: 6 (lower is better)
Translates to: LPACSPPLCRSV*SASLPGKALPR
Trigger: CCTGGGTAGCGCTTTTCCAGGAAGTGAGGCTGAGCAGACAGAGCGGCATAGAGGTGGCGAGCAGGCGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277982.9
ENST00000361941.7
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000649575.1
CDS CCA 72 bp ACCTCTATGCCGCTCTGTCTGCTCAGCCTCACTTCCTaGAAAAGCGCTACCCAGGGGCTTGCCGGGCCGGCT +
Preference number: 6 (lower is better)
Translates to: TSMPLCLLSLTS*KSATQGLAGPA
Trigger: AGCCGGCCCGGCAAGCCCCTGGGTAGCGCTTTTCCAGGAAGTGAGGCTGAGCAGACAGAGCGGCATAGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277982.9
ENST00000361941.7
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000649575.1
CDS GCA 72 bp AGCTGCTCAAAAGCGGTGATGCGGGAAGAGACGGTGTaGTTGGGGATGTGTTCCGAGCCCTCCTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: SCSKAVMREETV*LGMCSEPSWLG
Trigger: CCCCAGCCAGGAGGGCTCGGAACACATCCCCAAGCACACCGTCTCTTCCCGCATCACCGCTTTTGAGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS GCA 72 bp GCATCCAGGCGCCACTCAGGCTGTCTAGAGGTCTGCTaGTGCTCATGCTTCCGGATGGTGGTGAAGCGGGTG +
Preference number: 6 (lower is better)
Translates to: ASRRHSGCLEVC*CSCFRMVVKRV
Trigger: CACCCGCTTCACCACCATCCGGAAGCATGAGCAGCAGCAGACCTCTAGACAGCCTGAGTGGCGCCTGGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 72 bp TTGCCGGGTTTCCTGAGGGCTCGCAGGGCTACTGCTTaGGGTTTCCCTGTAGGAAGACGAGGCCCGGAGAGT +
Preference number: 6 (lower is better)
Translates to: LPGFLRARRATA*GFPVGRRGPES
Trigger: ACTCTCCGGGCCTCGTCTTCCTACAGGGAAACCCCAAGCAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
ENST00000492542.1
ENST00000607232.5
CDS CAA 90 bp CCCCACTGGAGTTCATCCCATCCATCTCCTTGGGATGGAGCTTGGTaGACTCAAGTAGGGACTCGGCCGAGCGGGCTGAGGTCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: PHWSSSHPSPWDGAW*TQVGTRPSGLRSGC
Trigger: GCAGCCTGACCTCAGCCCGCTCGGCCGAGTCCCTACTTGAGTCAACCAAGCTCCATCCCAAGGAGATGGATGGGATGAACTCCAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 72 bp GTAGAGGACTGGAATCGGTACTCGAAACAGCTCCCGTaGGGTCAGGCTCCGAGACTCTGCGGAGGTCCTCCG +
Preference number: 6 (lower is better)
Translates to: VEDWNRYSKQLP*GQAPRLCGGPP
Trigger: CGGAGGACCTCCGCAGAGTCTCGGAGCCTGACCTCACGGGAGCTGTTTCGAGTACCGATTCCAGTCCTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000277982.9
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
CDS TCA 72 bp CCGGACAGGTCCAGGGATGGCATGGAACGGGACCGCTaGATCAGCTGCTCAAAAGCGGTGATGCGGGAAGAG +
Preference number: 6 (lower is better)
Translates to: PDRSRDGMERDR*ISCSKAVMREE
Trigger: CTCTTCCCGCATCACCGCTTTTGAGCAGCTGATTCAGCGGTCCCGTTCCATGCCATCCCTGGACCTGTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 72 bp GCCTCCTGCCGCTGGTGCTGTACTCCTGGAGGCTCATaGTACTGCTCGACTTGCTGTCATAATCCCGTCGGG +
Preference number: 6 (lower is better)
Translates to: ASCRWCCTPGGS*YCSTCCHNPVG
Trigger: CCCGACGGGATTATGACAGCAAGTCGAGCAGTACCATGAGCCTCCAGGAGTACAGCACCAGCGGCAGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 72 bp TCCAGACCTGGTTTGCTTTCGTGTTGCCGGGTTTCCTaGGGGCTCGCAGGGCTACTGCTTGGGGTTTCCCTG +
Preference number: 6 (lower is better)
Translates to: SRPGLLSCCRVS*GLAGLLLGVSL
Trigger: CAGGGAAACCCCAAGCAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACACGAAAGCAAACCAGGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000607232.5
CDS TCA 72 bp CTTGCCGGGCCGGCTCTCCTCAGGGGTGTTGAGATCTaGGAGTCTCTGTTCAGTACTCAGGCACCTGACCAC +
Preference number: 6 (lower is better)
Translates to: LAGPALLRGVEI*ESLFSTQAPDH
Trigger: GTGGTCAGGTGCCTGAGTACTGAACAGAGACTCTCAGATCTCAACACCCCTGAGGAGAGCCGGCCCGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277982.9
ENST00000361941.7
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000649575.1
CDS TCA 72 bp CCTAGCACAGGTGGTCTCACATCTGGGAACGAAGCCTaGGTCCCCAGGGAAGGACTCTCGCCACGGTTAACG +
Preference number: 6 (lower is better)
Translates to: PSTGGLTSGNEA*VPREGLSPRLT
Trigger: CGTTAACCGTGGCGAGAGTCCTTCCCTGGGGACTCAGGCTTCGTTCCCAGATGTGAGACCACCTGTGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474353.6
ENST00000486141.3
CDS GCA 72 bp TGCCGCTGGTGCTGTACTCCTGGAGGCTCATGGTACTaGTCGACTTGCTGTCATAATCCCGTCGGGAGCGCA +
Preference number: 6 (lower is better)
Translates to: CRWCCTPGGSWY*STCCHNPVGSA
Trigger: TGCGCTCCCGACGGGATTATGACAGCAAGTCGAGCAGTACCATGAGCCTCCAGGAGTACAGCACCAGCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS GCA 72 bp CCTTTCTTGAGAGAGGACAGGGCCTCCTGCCGCTGGTaGTGTACTCCTGGAGGCTCATGGTACTGCTCGACT +
Preference number: 6 (lower is better)
Translates to: PFLREDRASCRW*CTPGGSWYCST
Trigger: AGTCGAGCAGTACCATGAGCCTCCAGGAGTACAGCACCAGCGGCAGGAGGCCCTGTCCTCTCTCAAGAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS GCA 72 bp TCCAGGCGCCACTCAGGCTGTCTAGAGGTCTGCTGCTaGTCATGCTTCCGGATGGTGGTGAAGCGGGTGTAT +
Preference number: 6 (lower is better)
Translates to: SRRHSGCLEVCC*SCFRMVVKRVY
Trigger: ATACACCCGCTTCACCACCATCCGGAAGCATGAGCAGCAGCAGACCTCTAGACAGCCTGAGTGGCGCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 72 bp GAGCTCCCCAGCGGCAGCTGCAAGAAGCTATCTTGGTaGATGCCTGAAGATGGCGTGTGGACACCACCGTCT +
Preference number: 6 (lower is better)
Translates to: ELPSGSCKKLSW*MPEDGVWTPPS
Trigger: AGACGGTGGTGTCCACACGCCATCTTCAGGCATCCACCAAGATAGCTTCTTGCAGCTGCCGCTGGGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS CCA 72 bp TCAGAGCTCCCCAGCGGCAGCTGCAAGAAGCTATCTTaGTGGATGCCTGAAGATGGCGTGTGGACACCACCG +
Preference number: 6 (lower is better)
Translates to: SELPSGSCKKLS*WMPEDGVWTPP
Trigger: CGGTGGTGTCCACACGCCATCTTCAGGCATCCACCAAGATAGCTTCTTGCAGCTGCCGCTGGGGAGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS CCA 72 bp ACTTGCTCAGCCTTCCGGACAGGTCCAGGGATGGCATaGAACGGGACCGCTGAATCAGCTGCTCAAAAGCGG +
Preference number: 6 (lower is better)
Translates to: TCSAFRTGPGMA*NGTAESAAQKR
Trigger: CCGCTTTTGAGCAGCTGATTCAGCGGTCCCGTTCCATGCCATCCCTGGACCTGTCCGGAAGGCTGAGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 72 bp GGGAGACTTGCTCAGCCTTCCGGACAGGTCCAGGGATaGCATGGAACGGGACCGCTGAATCAGCTGCTCAAA +
Preference number: 6 (lower is better)
Translates to: GRLAQPSGQVQG*HGTGPLNQLLK
Trigger: TTTGAGCAGCTGATTCAGCGGTCCCGTTCCATGCCATCCCTGGACCTGTCCGGAAGGCTGAGCAAGTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CAA 72 bp AGAAGGCTCTGGCTCCAGACCTGGTTTGCTTTCGTGTaGCCGGGTTTCCTGAGGGCTCGCAGGGCTACTGCT +
Preference number: 6 (lower is better)
Translates to: RRLWLQTWFAFV*PGFLRARRATA
Trigger: AGCAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACACGAAAGCAAACCAGGTCTGGAGCCAGAGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000607232.5
CDS TCA 72 bp GGCTGTGGTGGGGCCACCTCTGCAGATGAGGGGGAATaGAATCATCTAGAGTCGGGAAGGTCAGAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: GCGGATSADEGE*NHLESGRSEVR
Trigger: CCTCACCTCTGACCTTCCCGACTCTAGATGATTTCATTCCCCCTCATCTGCAGAGGTGGCCCCACCACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277982.9
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
CDS TCA 72 bp CACTCATCTGGTTTGCTTTCGTGTTGCCGGGTTTCCTaGGGGCTCGCAGGGCTACTGCTTGGGGTTTCCCTG +
Preference number: 6 (lower is better)
Translates to: HSSGLLSCCRVS*GLAGLLLGVSL
Trigger: CAGGGAAACCCCAAGCAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACACGAAAGCAAACCAGATGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354106.7
ENST00000371241.5
ENST00000474353.6
ENST00000492542.1
CDS TCA 72 bp TGCTCGACTTGCTGTCATAATCCCGTCGGGAGCGCATaGGCAGGTTCTCAATGCTCCCTCCCACTTGGAGGG +
Preference number: 6 (lower is better)
Translates to: CSTCCHNPVGSA*AGSQCSLPLGG
Trigger: CCCTCCAAGTGGGAGGGAGCATTGAGAACCTGCTCATGCGCTCCCGACGGGATTATGACAGCAAGTCGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS GCA 72 bp TCCCCAGCGGCAGCTGCAAGAAGCTATCTTGGTGGATaGCTGAAGATGGCGTGTGGACACCACCGTCTCCAT +
Preference number: 6 (lower is better)
Translates to: SPAAAARSYLGG*LKMACGHHRLH
Trigger: ATGGAGACGGTGGTGTCCACACGCCATCTTCAGGCATCCACCAAGATAGCTTCTTGCAGCTGCCGCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS CCA 72 bp CAAGGCGAGGTGGTCAGTGTTATAGATAGAAGCCTCTaGCAGAGGAGGCAAGGGTGGGGTCAGGGCCAGAGA +
Preference number: 6 (lower is better)
Translates to: QGEVVSVIDRSL*QRRQGWGQGQR
Trigger: TCTCTGGCCCTGACCCCACCCTTGCCTCCTCTGCCAGAGGCTTCTATCTATAACACTGACCACCTCGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS CCA 72 bp TGGAGTTCATCCCATCCATCTCCTTGGGATGGAGCTTaGTTGACTCAAGTAGGGACTCGGCCGAGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: WSSSHPSPWDGA*LTQVGTRPSGL
Trigger: CAGCCCGCTCGGCCGAGTCCCTACTTGAGTCAACCAAGCTCCATCCCAAGGAGATGGATGGGATGAACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CAA 72 bp AGTTCATCCCATCCATCTCCTTGGGATGGAGCTTGGTaGACTCAAGTAGGGACTCGGCCGAGCGGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: SSSHPSPWDGAW*TQVGTRPSGLR
Trigger: CCTCAGCCCGCTCGGCCGAGTCCCTACTTGAGTCAACCAAGCTCCATCCCAAGGAGATGGATGGGATGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CAA 72 bp CTGGAGTTCATCCCATCCATCTCCTTGGGATGGAGCTaGGTTGACTCAAGTAGGGACTCGGCCGAGCGGGCT +
Preference number: 6 (lower is better)
Translates to: LEFIPSISLGWS*VDSSRDSAERA
Trigger: AGCCCGCTCGGCCGAGTCCCTACTTGAGTCAACCAAGCTCCATCCCAAGGAGATGGATGGGATGAACTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 72 bp TGGAACGGGACCGCTGAATCAGCTGCTCAAAAGCGGTaGTGCGGGAAGAGACGGTGTGCTTGGGGATGTGTT +
Preference number: 6 (lower is better)
Translates to: WNGTAESAAQKR*CGKRRCAWGCV
Trigger: AACACATCCCCAAGCACACCGTCTCTTCCCGCATCACCGCTTTTGAGCAGCTGATTCAGCGGTCCCGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 72 bp GGGTGTATGAGGCCGGGCAGGTGCCCTTGCACTTGTTaGGGCGATGTTTGGGGAAATCTCCATGAACACTGC +
Preference number: 6 (lower is better)
Translates to: GCMRPGRCPCTC*GDVWGNLHEHC
Trigger: GCAGTGTTCATGGAGATTTCCCCAAACATCGCCTCAACAAGTGCAAGGGCACCTGCCCGGCCTCATACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 72 bp TGCCTCTTGCTCTGGCTGCTAAAGGCATCACTAAGCTaGGAGATGACACTATCAGAGCTCCCCAGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: CLLLWLLKASLS*EMTLSELPSGS
Trigger: GCTGCCGCTGGGGAGCTCTGATAGTGTCATCTCCCAGCTTAGTGATGCCTTTAGCAGCCAGAGCAAGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS CCA 72 bp TCACCCCTGGACAATGCCAGGCTACTCTTTTCAAAGTaGGAGGCAAGATCCCGCACACTCGAGGAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: SPLDNARLLFSK*EARSRTLEEEE
Trigger: CTCCTCCTCCTCGAGTGTGCGGGATCTTGCCTCCCACTTTGAAAAGAGTAGCCTGGCATTGTCCAGGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CAA 72 bp AGGCCCCAGAGGTGTTGGAGGTCTGGCAGTGCCTTCTaGCCCTCTGTCAGTATTAACCAGGTAGAGAGGGAC +
Preference number: 6 (lower is better)
Translates to: RPQRCWRSGSAF*PSVSINQVERD
Trigger: GTCCCTCTCTACCTGGTTAATACTGACAGAGGGCAAGAAGGCACTGCCAGACCTCCAACACCTCTGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277982.9
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
ENST00000492542.1
CDS CAA 72 bp GGAAGAAAGCCTCCACTCATCTGGTTTGCTTTCGTGTaGCCGGGTTTCCTGAGGGCTCGCAGGGCTACTGCT +
Preference number: 6 (lower is better)
Translates to: GRKPPLIWFAFV*PGFLRARRATA
Trigger: AGCAGTAGCCCTGCGAGCCCTCAGGAAACCCGGCAACACGAAAGCAAACCAGATGAGTGGAGGCTTTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354106.7
ENST00000371241.5
ENST00000474353.6
ENST00000492542.1
CDS CAA 90 bp CATGAACACTGCCGCCACTGCCTTCTCTGCTGTCAGTGGAGATATTaGAACAGCGGTCCACGTCATCAGAGCAGGTGGAGAGAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: HEHCRHCLLCCQWRY*NSGPRHQSRWREAQ
Trigger: CTGAGCCTCTCTCCACCTGCTCTGATGACGTGGACCGCTGTTCAAATATCTCCACTGACAGCAGAGAAGGCAGTGGCGGCAGTGTTCATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 72 bp AAGAGCGGGCTGGGAGGGGTAGTGTGGCCGACCTCTTaGCTACCTTCTCACCATCAATGTAGCTCATCTCAC +
Preference number: 6 (lower is better)
Translates to: KSGLGGVVWPTS*LPSHHQCSSSH
Trigger: GTGAGATGAGCTACATTGATGGTGAGAAGGTAGTCAAGAGGTCGGCCACACTACCCCTCCCAGCCCGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000472854.5
ENST00000474353.6
ENST00000607232.5
ENST00000634504.1
CDS TCA 72 bp GCAGAGCTGGATGGTCGCTTGAGCCCACTCAGGCCCTaGAGAGGGATGTCACCACCTTCCAAGACACTTTTA +
Preference number: 6 (lower is better)
Translates to: AELDGRLSPLRP*RGMSPPSKTLL
Trigger: TAAAAGTGTCTTGGAAGGTGGTGACATCCCTCTTCAGGGCCTGAGTGGGCTCAAGCGACCATCCAGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
ENST00000607232.5
ENST00000634504.1
CDS TCA 72 bp CAGCGGCAGCTGCAAGAAGCTATCTTGGTGGATGCCTaGAGATGGCGTGTGGACACCACCGTCTCCATTCAT +
Preference number: 6 (lower is better)
Translates to: QRQLQEAILVDA*RWRVDTTVSIH
Trigger: ATGAATGGAGACGGTGGTGTCCACACGCCATCTTCAGGCATCCACCAAGATAGCTTCTTGCAGCTGCCGCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS GCA 72 bp ATGGTGCGTCGGAATGACGCCTGTGTGGCGTCGAGCTaGAATATCAGCCTCTTCTTGCTCGCGTTTAAGTCG +
Preference number: 6 (lower is better)
Translates to: MVRRNDACVASS*NISLFLLAFKS
Trigger: CGACTTAAACGCGAGCAAGAAGAGGCTGATATTGCAGCTCGACGCCACACAGGCGTCATTCCGACGCACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000474353.6
ENST00000607232.5
ENST00000634504.1
CDS GCA 72 bp TGGGAGATGACACTATCAGAGCTCCCCAGCGGCAGCTaGAAGAAGCTATCTTGGTGGATGCCTGAAGATGGC +
Preference number: 6 (lower is better)
Translates to: WEMTLSELPSGS*KKLSWWMPEDG
Trigger: GCCATCTTCAGGCATCCACCAAGATAGCTTCTTGCAGCTGCCGCTGGGGAGCTCTGATAGTGTCATCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS GCA 72 bp GCCTTCTCTGAGGGCAAGAGGATACTCTTCTGTTCCTaGAAAAGAGCGCTGGGAGCAGAGAGCCTGGGTTTG +
Preference number: 6 (lower is better)
Translates to: AFSEGKRILFCS*KRALGAESLGL
Trigger: CAAACCCAGGCTCTCTGCTCCCAGCGCTCTTTTGCAGGAACAGAAGAGTATCCTCTTGCCCTCAGAGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 72 bp AGAGAGGGACAACTATTACCTCCGGCTGGGCTGCACTaGAGGAAGTGGCATCCTGGGACTTGTCAGAAGGAA +
Preference number: 6 (lower is better)
Translates to: REGQLLPPAGLH*RKWHPGTCQKE
Trigger: TTCCTTCTGACAAGTCCCAGGATGCCACTTCCTCCAGTGCAGCCCAGCCGGAGGTAATAGTTGTCCCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277982.9
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000492542.1
CDS CCA 72 bp GAACTCATGGTGGTGGCAGGACAAGTCGTCTGCAACTaGGGCTCTGAACTGCTCAGTGGTTTAAGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: ELMVVAGQVVCN*GSELLSGLRWW
Trigger: CCACCACCTTAAACCACTGAGCAGTTCAGAGCCCCAGTTGCAGACGACTTGTCCTGCCACCACCATGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
ENST00000607232.5
CDS CAA 72 bp TCCGAAATGCAGGCCTTCGCAGCTGACAGGGGCTTCTaGTGCTTACACACAGGGCCTAACGCATTGCTAGTG +
Preference number: 6 (lower is better)
Translates to: SEMQAFAADRGF*CLHTGPNALLV
Trigger: CACTAGCAATGCGTTAGGCCCTGTGTGTAAGCACAAGAAGCCCCTGTCAGCTGCGAAGGCCTGCATTTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CAA 90 bp GCAGCCAAGAGGCCCCAGAGGTGTTGGAGGTCTGGCAGTGCCTTCTaGCCCTCTGTCAGTATTAACCAGGTAGAGAGGGACAACTATTAC +
Preference number: 6 (lower is better)
Translates to: AAKRPQRCWRSGSAF*PSVSINQVERDNYY
Trigger: GTAATAGTTGTCCCTCTCTACCTGGTTAATACTGACAGAGGGCAAGAAGGCACTGCCAGACCTCCAACACCTCTGGGGCCTCTTGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277982.9
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
CDS TCA 72 bp TTGAGGAGGTCCCCAAAGCGCTCATTAGTGATAAACTaGTGGTGCGTCGGAATGACGCCTGTGTGGCGTCGA +
Preference number: 6 (lower is better)
Translates to: LRRSPKRSLVIN*WCVGMTPVWRR
Trigger: TCGACGCCACACAGGCGTCATTCCGACGCACCATCAGTTTATCACTAATGAGCGCTTTGGGGACCTCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000474353.6
ENST00000607232.5
ENST00000634504.1
CDS CCA 72 bp AACTGGGGCTCTGAACTGCTCAGTGGTTTAAGGTGGTaGGAAGATGCATTGGTCCAGGAGCTCTGGGCAGAA +
Preference number: 6 (lower is better)
Translates to: NWGSELLSGLRW*EDALVQELWAE
Trigger: TTCTGCCCAGAGCTCCTGGACCAATGCATCTTCCCACCACCTTAAACCACTGAGCAGTTCAGAGCCCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
ENST00000607232.5
CDS CCA 72 bp ACCTTTACGATCCACTTTAGTGGAAGCAGAGCTGGATaGTCGCTTGAGCCCACTCAGGCCCTGAAGAGGGAT +
Preference number: 6 (lower is better)
Translates to: TFTIHFSGSRAG*SLEPTQALKRD
Trigger: ATCCCTCTTCAGGGCCTGAGTGGGCTCAAGCGACCATCCAGCTCTGCTTCCACTAAAGTGGATCGTAAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CAA 90 bp TGTTCCTGCAAAAGAGCGCTGGGAGCAGAGAGCCTGGGTTTGAATTaGGATGGAAGGATTTCCGAAATGCAGGCCTTCGCAGCTGACAGG +
Preference number: 6 (lower is better)
Translates to: CSCKRALGAESLGLN*DGRISEMQAFAADR
Trigger: CCTGTCAGCTGCGAAGGCCTGCATTTCGGAAATCCTTCCATCCAAATTCAAACCCAGGCTCTCTGCTCCCAGCGCTCTTTTGCAGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS GCA 72 bp CCTGTGTGGCGTCGAGCTGCAATATCAGCCTCTTCTTaGTCGCGTTTAAGTCGTCTCTGGTCCGCTAAAAGT +
Preference number: 6 (lower is better)
Translates to: PVWRRAAISASS*SRLSRLWSAKS
Trigger: ACTTTTAGCGGACCAGAGACGACTTAAACGCGAGCAAGAAGAGGCTGATATTGCAGCTCGACGCCACACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000474353.6
ENST00000607232.5
ENST00000634504.1
CDS GCA 72 bp TTCCTCTCATATTGTCCACTCTCTTCGCGCCATGGCTaGCTCTTGCTCTGGCTGCTAAAGGCATCACTAAGC +
Preference number: 6 (lower is better)
Translates to: FLSYCPLSSRHG*LLLWLLKASLS
Trigger: GCTTAGTGATGCCTTTAGCAGCCAGAGCAAGAGGCAGCCATGGCGCGAAGAGAGTGGACAATATGAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS CCA 72 bp GTGAAGAGGGCTGGGCATTTCCATTGGCATCAGCACTaGAAGAAAGCCTCCACTCATCTGCTGAAGAAGGCT +
Preference number: 6 (lower is better)
Translates to: VKRAGHFHWHQH*KKASTHLLKKA
Trigger: AGCCTTCTTCAGCAGATGAGTGGAGGCTTTCTTCCAGTGCTGATGCCAATGGAAATGCCCAGCCCTCTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000607232.5
CDS CCA 72 bp CTTTGGAACCACCATCACATTCAGAACTCATGGTGGTaGCAGGACAAGTCGTCTGCAACTGGGGCTCTGAAC +
Preference number: 6 (lower is better)
Translates to: LWNHHHIQNSWW*QDKSSATGALN
Trigger: GTTCAGAGCCCCAGTTGCAGACGACTTGTCCTGCCACCACCATGAGTTCTGAATGTGATGGTGGTTCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
ENST00000492542.1
ENST00000607232.5
CDS CAA 90 bp GCTTTCCTCTCATATTGTCCACTCTCTTCGCGCCATGGCTGCCTCTaGCTCTGGCTGCTAAAGGCATCACTAAGCTGGGAGATGACACTA +
Preference number: 6 (lower is better)
Translates to: AFLSYCPLSSRHGCL*LWLLKASLSWEMTL
Trigger: TAGTGTCATCTCCCAGCTTAGTGATGCCTTTAGCAGCCAGAGCAAGAGGCAGCCATGGCGCGAAGAGAGTGGACAATATGAGAGGAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361941.7
ENST00000371227.8
ENST00000371247.7
ENST00000649575.1
CDS CAA 90 bp GGAAGGATTTCCGAAATGCAGGCCTTCGCAGCTGACAGGGGCTTCTaGTGCTTACACACAGGGCCTAACGCATTGCTAGTGTTAAACGTT +
Preference number: 6 (lower is better)
Translates to: GRISEMQAFAADRGF*CLHTGPNALLVLNV
Trigger: AACGTTTAACACTAGCAATGCGTTAGGCCCTGTGTGTAAGCACAAGAAGCCCCTGTCAGCTGCGAAGGCCTGCATTTCGGAAATCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 72 bp GAGTCTCTGTTCAGTACTCAGGCACCTGACCACGTCTaGAGGCTTCAAGCAGCTCTTCTTAGAGATCTTGGG +
Preference number: 6 (lower is better)
Translates to: ESLFSTQAPDHV*RLQAALLRDLG
Trigger: CCCAAGATCTCTAAGAAGAGCTGCTTGAAGCCTTCAGACGTGGTCAGGTGCCTGAGTACTGAACAGAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277982.9
ENST00000361941.7
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000649575.1
CDS CCA 72 bp TTTTCAATAGCCTTGCCAGGTGAGGTGGGTTTTTCCTaGGTTGGTGCTGAGTCCTGCTCTCCCACTCTTCTT +
Preference number: 6 (lower is better)
Translates to: FSIALPGEVGFS*VGAESCSPTLL
Trigger: AAGAAGAGTGGGAGAGCAGGACTCAGCACCAACCCAGGAAAAACCCACCTCACCTGGCAAGGCTATTGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000465489.1
ENST00000474353.6
ENST00000486141.3
ENST00000607232.5
CDS CCA 72 bp TCTCAGTGTTCCGGAGTGGGATGCCCACTTCATCCATaGAAACATCGCTTAAGTCCTGAGTGCTCTTCACCA +
Preference number: 6 (lower is better)
Translates to: SQCSGVGCPLHP*KHRLSPECSSP
Trigger: TGGTGAAGAGCACTCAGGACTTAAGCGATGTTTCCATGGATGAAGTGGGCATCCCACTCCGGAACACTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000465489.1
ENST00000474353.6
ENST00000607232.5
CDS CCA 72 bp AGGCAGGTCCATGTAATCCACAGGGTTTTTCACCAGTaGTCGCTTGATCACATCCACGTAGGTGATGGGGAA +
Preference number: 6 (lower is better)
Translates to: RQVHVIHRVFHQ*SLDHIHVGDGE
Trigger: TTCCCCATCACCTACGTGGATGTGATCAAGCGACCACTGGTGAAAAACCCTGTGGATTACATGGACCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000607232.5
ENST00000634504.1
ENST00000649911.1
CDS CCA 72 bp GTGAAGAGGGCTGGGCATTTCCATTGGCATCAGCACTaGAAGAAAGCCTCCACTCATCTGGTTTGCTTTCGT +
Preference number: 6 (lower is better)
Translates to: VKRAGHFHWHQH*KKASTHLVCFR
Trigger: ACGAAAGCAAACCAGATGAGTGGAGGCTTTCTTCCAGTGCTGATGCCAATGGAAATGCCCAGCCCTCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354106.7
ENST00000371241.5
ENST00000474353.6
ENST00000492542.1
CDS CCA 72 bp TCAGGTAGAGGGAATCCTTATAGGTATTGTGGATGGTaGGGGACTGCCATGCAAAGCGGTCCTTTTGAGGGA +
Preference number: 6 (lower is better)
Translates to: SGRGNPYRYCGW*GTAMQSGPFEG
Trigger: TCCCTCAAAAGGACCGCTTTGCATGGCAGTCCCCCACCATCCACAATACCTATAAGGATTCCCTCTACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474353.6
ENST00000486141.3
CDS CCA 72 bp CCATATTGCTACATGTTGGGGAAGCATAGACCCCACTaGAGTTCATCCCATCCATCTCCTTGGGATGGAGCT +
Preference number: 6 (lower is better)
Translates to: PYCYMLGKHRPH*SSSHPSPWDGA
Trigger: AGCTCCATCCCAAGGAGATGGATGGGATGAACTCCAGTGGGGTCTATGCTTCCCCAACATGTAGCAATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 72 bp GAAGCTCAAGGCATGGTGTGCCATATTGCTACATGTTaGGGAAGCATAGACCCCACTGGAGTTCATCCCATC +
Preference number: 6 (lower is better)
Translates to: EAQGMVCHIATC*GSIDPTGVHPI
Trigger: GATGGGATGAACTCCAGTGGGGTCTATGCTTCCCCAACATGTAGCAATATGGCACACCATGCCTTGAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 72 bp ATGCCCACTTCATCCATGGAAACATCGCTTAAGTCCTaGGTGCTCTTCACCACCCGCCTACTGTCATCCTTT +
Preference number: 6 (lower is better)
Translates to: MPTSSMETSLKS*VLFTTRLLSSF
Trigger: AAAGGATGACAGTAGGCGGGTGGTGAAGAGCACTCAGGACTTAAGCGATGTTTCCATGGATGAAGTGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000465489.1
ENST00000474353.6
ENST00000486141.3
ENST00000607232.5
CDS TCA 72 bp ATTCTCCAAGCTAGTGAGATCCCCAGGAGCCCCGTCTaGTTCCCTCTTCACTGCATGGAAGTTGGAAGAATA +
Preference number: 6 (lower is better)
Translates to: ILQASEIPRSPV*FPLHCMEVGRI
Trigger: TATTCTTCCAACTTCCATGCAGTGAAGAGGGAATCAGACGGGGCTCCTGGGGATCTCACTAGCTTGGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000277982.9
ENST00000306402.10
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371241.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
ENST00000607232.5
ENST00000634504.1
CDS TCA 72 bp CTTTTCAGATTCTGTGAGATCTGGTCCTGCTCTCAATaGATGATGAGAAAGCTGGCTCCCACCTCTCCGAGC +
Preference number: 6 (lower is better)
Translates to: LFRFCEIWSCSQ*MMRKLAPTSPS
Trigger: GCTCGGAGAGGTGGGAGCCAGCTTTCTCATCATTCATTGAGAGCAGGACCAGATCTCACAGAATCTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371227.8
CDS GCA 72 bp CCCGACTCATCTTTTCGTTGGTCAGAACGGAAGACTTaGCAGGCTGATATTCGTAAATGCTCTTGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: PDSSFRWSERKT*QADIRKCSWAL
Trigger: CAGAGCCCAAGAGCATTTACGAATATCAGCCTGGCAAGTCTTCCGTTCTGACCAACGAAAAGATGAGTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000277982.9
ENST00000354106.7
ENST00000361941.7
ENST00000371227.8
ENST00000371239.5
ENST00000371245.7
ENST00000371246.6
ENST00000371247.7
ENST00000607232.5
ENST00000634504.1
CDS GCA 72 bp GATGTTTGGGGAAATCTCCATGAACACTGCCGCCACTaGCTTCTCTGCTGTCAGTGGAGATATTTGAACAGC +
Preference number: 6 (lower is better)
Translates to: DVWGNLHEHCRH*LLCCQWRYLNS
Trigger: GCTGTTCAAATATCTCCACTGACAGCAGAGAAGGCAGTGGCGGCAGTGTTCATGGAGATTTCCCCAAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 72 bp TTAAGGTGGTGGGAAGATGCATTGGTCCAGGAGCTCTaGGCAGAAAGCTTTCACGAACTCTTCCAAAGGATG +
Preference number: 6 (lower is better)
Translates to: LRWWEDALVQEL*AESFHELFQRM
Trigger: CATCCTTTGGAAGAGTTCGTGAAAGCTTTCTGCCCAGAGCTCCTGGACCAATGCATCTTCCCACCACCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306402.10
ENST00000371227.8
ENST00000371246.6
ENST00000371247.7
ENST00000371249.6
ENST00000474353.6
ENST00000482068.1
ENST00000607232.5
CDS TCA 72 bp ACTTTGTGGGTTGTTGTTCCTGTCCAGGCTGTGGTCTaGGTATGGCACGGAGTTTCCATTATTAATGGCCCT +
Preference number: 6 (lower is better)
Translates to: TLWVVVPVQAVV*VWHGVSIINGP
Trigger: AGGGCCATTAATAATGGAAACTCCGTGCCATACTCAGACCACAGCCTGGACAGGAACAACAACCCACAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371228.2
ENST00000607232.5
CDS GCA 72 bp CTGAGCTCATCTTTTCGTTGGTCAGAACGGAAGACTTaGCAGGCTGATATTCGTAAATGCTCTTGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: LSSSFRWSERKT*QADIRKCSWAL
Trigger: CAGAGCCCAAGAGCATTTACGAATATCAGCCTGGCAAGTCTTCCGTTCTGACCAACGAAAAGATGAGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306402.10
ENST00000371241.5
ENST00000371249.6
ENST00000474353.6
CDS CAA 72 bp AGGGGCTTCTTGTGCTTACACACAGGGCCTAACGCATaGCTAGTGTTAAACGTTCGGCTATGGACTGAAGAT +
Preference number: 6 (lower is better)
Translates to: RGFLCLHTGPNA*LVLNVRLWTED
Trigger: ATCTTCAGTCCATAGCCGAACGTTTAACACTAGCAATGCGTTAGGCCCTGTGTGTAAGCACAAGAAGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS GCA 72 bp ATTTGGCTCTGGCAGGTCTCATCCAGATTTCCTTTTTaGAGTATCGTCTATATTGAGGAGGTCCCCAAAGCG +
Preference number: 6 (lower is better)
Translates to: IWLWQVSSRFPF*SIVYIEEVPKA
Trigger: CGCTTTGGGGACCTCCTCAATATAGACGATACTGCAAAAAGGAAATCTGGATGAGACCTGCCAGAGCCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474353.6
CDS TCA 72 bp AAGCTCCATAACAGGAACTTTTACACTCGATCCTACTaGACCCGAAGCCCTGTGAGTAGATTCACGTATTCC +
Preference number: 6 (lower is better)
Translates to: KLHNRNFYTRSY*TRSPVSRFTYS
Trigger: GGAATACGTGAATCTACTCACAGGGCTTCGGGTTCAGTAGGATCGAGTGTAAAAGTTCCTGTTATGGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465489.1
CDS TCA 72 bp AGAAACACAAAGGTTCTCACAGCTTTGAGCCTTCTCTaGGGGCAAGAGGATACTCTTCTGTTCCTGCAAAAG +
Preference number: 6 (lower is better)
Translates to: RNTKVLTALSLL*GQEDTLLFLQK
Trigger: CTTTTGCAGGAACAGAAGAGTATCCTCTTGCCCTCAGAGAAGGCTCAAAGCTGTGAGAACCTTTGTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS CCA 72 bp AGTTCACTTTGTGGGTTGTTGTTCCTGTCCAGGCTGTaGTCTGAGTATGGCACGGAGTTTCCATTATTAATG +
Preference number: 6 (lower is better)
Translates to: SSLCGLLFLSRL*SEYGTEFPLLM
Trigger: CATTAATAATGGAAACTCCGTGCCATACTCAGACCACAGCCTGGACAGGAACAACAACCCACAAAGTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371228.2
ENST00000607232.5
CDS TCA 72 bp ACTTTTACACTCGATCCTACTGAACCCGAAGCCCTGTaGGTAGATTCACGTATTCCCATATTACAACTCGCA +
Preference number: 6 (lower is better)
Translates to: TFTLDPTEPEAL*VDSRIPILQLA
Trigger: TGCGAGTTGTAATATGGGAATACGTGAATCTACTCACAGGGCTTCGGGTTCAGTAGGATCGAGTGTAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465489.1
CDS TCA 72 bp AACGTTCGGCTATGGACTGAAGATGAAGAAATCATGTaGGCATTCCCACCTTTACGATCCACTTTAGTGGAA +
Preference number: 6 (lower is better)
Translates to: NVRLWTEDEEIM*AFPPLRSTLVE
Trigger: TTCCACTAAAGTGGATCGTAAAGGTGGGAATGCTCACATGATTTCTTCATCTTCAGTCCATAGCCGAACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 72 bp TTTAAAGAACCAGAAACACAAAGGTTCTCACAGCTTTaGGCCTTCTCTGAGGGCAAGAGGATACTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: FKEPETQRFSQL*AFSEGKRILFC
Trigger: ACAGAAGAGTATCCTCTTGCCCTCAGAGAAGGCTCAAAGCTGTGAGAACCTTTGTGTTTCTGGTTCTTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607232.5
CDS TCA 72 bp TGCAAACCGCTTCCACATAGCTCTTTTCAGATTCTGTaGGATCTGGTCCTGCTCTCAATGAATGATGAGAAA +
Preference number: 6 (lower is better)
Translates to: CKPLPHSSFQIL*DLVLLSMNDEK
Trigger: TTTCTCATCATTCATTGAGAGCAGGACCAGATCTCACAGAATCTGAAAAGAGCTATGTGGAAGCGGTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647619.1
CDS GCA 72 bp GACATGACAGAGCAAGACTTTGTCTCTTCGGAAGTTTaGTGGATTTCAGGAAGTTCAGGGAATTTGTACGTA +
Preference number: 6 (lower is better)
Translates to: DMTEQDFVSSEV*WISGSSGNLYV
Trigger: TACGTACAAATTCCCTGAACTTCCTGAAATCCAGCAAACTTCCGAAGAGACAAAGTCTTGCTCTGTCATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277982.9
ENST00000371246.6
CDS GCA 72 bp TATCTCAAGGGGAAAGAATGTAATCCAACTGCACAATaGATTCTGATTAAAGAACATGGGCACGGTGAGACA +
Preference number: 6 (lower is better)
Translates to: YLKGKECNPTAQ*ILIKEHGHGET
Trigger: TGTCTCACCGTGCCCATGTTCTTTAATCAGAATGCATTGTGCAGTTGGATTACATTCTTTCCCCTTGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472854.5
CDS CAA 72 bp TCTCATCCAGATTTCCTTTTTGCAGTATCGTCTATATaGAGGAGGTCCCCAAAGCGCTCATTAGTGATAAAC +
Preference number: 6 (lower is better)
Translates to: SHPDFLFAVSSI*RRSPKRSLVIN
Trigger: GTTTATCACTAATGAGCGCTTTGGGGACCTCCTCAATATAGACGATACTGCAAAAAGGAAATCTGGATGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474353.6
CDS TCA 72 bp AGGGGAAAGAATGTAATCCAACTGCACAATGCATTCTaGTTAAAGAACATGGGCACGGTGAGACAAAATAAC +
Preference number: 6 (lower is better)
Translates to: RGKNVIQLHNAF*LKNMGTVRQNN
Trigger: GTTATTTTGTCTCACCGTGCCCATGTTCTTTAATCAGAATGCATTGTGCAGTTGGATTACATTCTTTCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472854.5
CDS TCA 72 bp TCAGTGCGGCAAGTTCAGGATAATACCATGAGCTGGTaGGTACATAACTCACTATATTTAGTTCTTCTTTCG +
Preference number: 6 (lower is better)
Translates to: SVRQVQDNTMSW*VHNSLYLVLLS
Trigger: CGAAAGAAGAACTAAATATAGTGAGTTATGTACTCACCAGCTCATGGTATTATCCTGAACTTGCCGCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492542.1
CDS GCA 72 bp ATACCTTGTGATGAAAGTCAAGGGGATGAGAAACAGTaGTGCAGTAATGAACAGATTTTTCGGCAATGTTTA +
Preference number: 6 (lower is better)
Translates to: IPCDESQGDEKQ*CSNEQIFRQCL
Trigger: TAAACATTGCCGAAAAATCTGTTCATTACTGCAGCACTGTTTCTCATCCCCTTGACTTTCATCACAAGGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000647619.1
ENST00000649575.1
ENST00000649911.1