RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SON (Homo sapiens)

Ensembl gene IDs: ENSG00000159140

Ensembl transcript IDs: ENST00000300278.8, ENST00000356577.10, ENST00000381679.8, ENST00000381692.6, ENST00000429093.6, ENST00000436227.5, ENST00000455528.5, ENST00000467616.5, ENST00000475072.1, ENST00000478183.5, ENST00000492229.1

Found 577 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTGTCTGTGTCTTTGCGTATATGCAGTATACTCGTGGCGATCAGTaGACGCGTCGTGAATGGAAACGAAACTGTAGGCGAGCTTCTGCG +
Preference number: 1 (lower is better)
Translates to: IVCVFAYMQYTRGDQ*TRREWKRNCRRASA
Trigger: CGCAGAAGCTCGCCTACAGTTTCGTTTCCATTCACGACGCGTTCACTGATCGCCACGAGTATACTGCATATACGCAAAGACACAGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR TCA 90 bp CATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAAATGTTaGTGCGAAAGAAGTTCCTTTCAGGCAATGGCCAGCTATTCTTAT +
Preference number: 1 (lower is better)
Translates to: HYRQWLVPNSQNPKC*CERSSFQAMASYSY
Trigger: ATAAGAATAGCTGGCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR CCA 90 bp GCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATaGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGAT +
Preference number: 1 (lower is better)
Translates to: AKTRNVDAKEVPFRQ*PAILINFQAPVAKD
Trigger: ATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR TCA 90 bp GCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATTTCTaGAGATTGTCTGTGTCTTTGCGTATATGCAGTATACTCGTGGCG +
Preference number: 1 (lower is better)
Translates to: AILINFQAPVAKDHF*RLSVSLRICSILVA
Trigger: CGCCACGAGTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR TCA 90 bp ACACAAGAGTATATTAAGCTTGTAACCAAGGGGAACAGAATATATTaGCAGTGGCAGGCTGGCATAAGGCTAGCCAATAACAAGTTCCAA +
Preference number: 1 (lower is better)
Translates to: TQEYIKLVTKGNRIY*QWQAGIRLANNKFQ
Trigger: TTGGAACTTGTTATTGGCTAGCCTTATGCCAGCCTGCCACTGTCAATATATTCTGTTCCCCTTGGTTACAAGCTTAATATACTCTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR TCA 90 bp CTTAGGAAAATAAGGCATGATGGAGAGGGTGCAATTGATGAGGTCTaGTACATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAAC +
Preference number: 1 (lower is better)
Translates to: LRKIRHDGEGAIDEV*YIKQSQFLPEMQRN
Trigger: GTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTATGTATCAGACCTCATCAATTGCACCCTCTCCATCATGCCTTATTTTCCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR CCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTaGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATAT +
Preference number: 1 (lower is better)
Translates to: LSGNGQLFLLISKLR*QKIISEDCLCLCVY
Trigger: ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR CCA 90 bp AAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTaGCTTTATAAAAAGGTCAAGAGTAAATTTGGGTACACCTGTCTC +
Preference number: 1 (lower is better)
Translates to: KVNSFLRCKGTDSIT*LYKKVKSKFGYTCL
Trigger: GAGACAGGTGTACCCAAATTTACTCTTGACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR-3UTR GCA 90 bp CACTGCTATGCTGCCAGTACTCATCTTCGTAGCACGAGGCGTCCATTCTCTCCCGGCCTCCCAACCACTTaGTGTAACCAGCAGCTGACA +
Preference number: 2 (lower is better)
Translates to: HCYAASTHLRSTRRPFSPGLPTT*CNQQLT
Trigger: TGTCAGCTGCTGGTTACAGCAAGTGGTTGGGAGGCC...GGGAGAGAATGGACGCCTCGTGCTACGAAGATGAGTACTGGCAGCATAGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429093.6
3UTR-3UTR CCA 90 bp CAATCCATTAGACCACGCGGCCTCCCAGTTTCAGCACTGCTATGCTGCCAGTACAGGCTTCCAGTCCCATaGCAAGATCACCACATGCAG +
Preference number: 2 (lower is better)
Translates to: QSIRPRGLPVSALLCCQYRLPVP*QDHHMQ
Trigger: CTGCATGTGGTGATCTTGCCATGGGACTGGAAGCCT...GTACTGGCAGCATAGCAGTGCTGAAACTGGGAGGCCGCGTGGTCTAATGGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429093.6
3UTR-3UTR TCA 90 bp TTCCAGTCCCATGGCAAGATCACCACATGCAGAGCTAATACTAGGGCCTCCCAAGCTGTAACCAGCAGCTaGCAACCAAAAGGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: FQSHGKITTCRANTRASQAVTSS*QPKGPG
Trigger: CCCAGGACCTTTTGGTTGTCAGCTGCTGGTTACAGC...TTGGGAGGCCCTAGTATTAGCTCTGCATGTGGTGATCTTGCCATGGGACTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429093.6
3UTR-3UTR CCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCTATGCAGTATACTCGTaGCGATCAGTGAACGCGTCG +
Preference number: 2 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSYAVYS*RSVNAS
Trigger: CGACGCGTTCACTGATCGCCACGAGTATACTGCATA...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR CAA 90 bp TGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTaGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACCCGAT +
Preference number: 2 (lower is better)
Translates to: CSHQPTMTFSNPVLV*NLRICPLRSIPPPD
Trigger: ATCGGGTGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
3UTR-3UTR TCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGACTCGTGGCGATCAGTaGACGCGTCGTGAATGGAAA +
Preference number: 2 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKTRGDQ*TRREWK
Trigger: TTTCCATTCACGACGCGTTCACTGATCGCCACGAGT...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR-3UTR GCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATCGAGCTTCTGCGTGTTaGTCACTCAACACCTCCTCC +
Preference number: 2 (lower is better)
Translates to: RQWPAILINFQAPVAKDHRASAC*SLNTSS
Trigger: GGAGGAGGTGTTGAGTGAGCAACACGCAGAAGCTCG...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR-3UTR CCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTGGCCATTATCGCCAATaGCTGGTACCAAACAGCCAA +
Preference number: 2 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLAGHYRQ*LVPNSQ
Trigger: TTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCC...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR-3UTR GCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGGTGTCTTTGCGTATATaGAGTATACTCGTGGCGATC +
Preference number: 2 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKVSLRI*SILVAI
Trigger: GATCGCCACGAGTATACTGCATATACGCAAAGACAC...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR CAA 90 bp GCTGCCAGTACTCATCTTCGTAGCACGAGGCGTCCATTCTCTCCCTaGATTTTAGGTCTTACATATCTGTTTTGTCATGAAATTAGTGGT +
Preference number: 2 (lower is better)
Translates to: AASTHLRSTRRPFSP*ILGLTYLFCHEISG
Trigger: ACCACTAATTTCATGACAAAACAGATATGTAAGACCTAAAATCAAGGGAGAGAATGGACGCCTCGTGCTACGAAGATGAGTACTGGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429093.6
3UTR-3UTR TCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTCAAAACCCGAAATGTTaGTGCGAAAGAAGTTCCTTT +
Preference number: 2 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLAQNPKC*CERSSF
Trigger: AAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTG...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR-3UTR CCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCATTTCCAAGCTCCGGTaGCAAAAGATCATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGISKLR*QKIISE
Trigger: TTCAGAAATGATCTTTTGCCACCGGAGCTTGGAAAT...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR-3UTR CCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTACAGTGTGGTATTTCTaGATCCTAGCAGCAATATTT +
Preference number: 2 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLATVWYF*ILAAIF
Trigger: AAATATTGCTGCTAGGATCCAGAAATACCACACTGT...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR CAA 90 bp GAACAGACTCCATTACCTGGCTTTATAAAAAGGTCAAGAGTAAATTaGGGTACACCTGTCTCTATACAAGCAGTAGATTTAATGACATCT +
Preference number: 2 (lower is better)
Translates to: EQTPLPGFIKRSRVN*GTPVSIQAVDLMTS
Trigger: AGATGTCATTAAATCTACTGCTTGTATAGAGACAGGTGTACCCAAATTTACTCTTGACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR GCA 72 bp CCCTCAGGCTTCCAGTCCCATGGCAAGATCACCACATaGAGAGCTAATACTAGGGCCTCCCAACCACTTGCT +
Preference number: 3 (lower is better)
Translates to: PSGFQSHGKITT*RANTRASQPLA
Trigger: AGCAAGTGGTTGGGAGGCCCTAGTATTAGCTCTGCATGTGGTGATCTTGCCATGGGACTGGAAGCCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429093.6
3UTR GCA 72 bp AATCCATTAGACCACGCGGCCTCCCAGTTTCAGCACTaGTATGCTGCCAGTACTCATCTTCGTAGCACGAGG +
Preference number: 3 (lower is better)
Translates to: NPLDHAASQFQH*YAASTHLRSTR
Trigger: CCTCGTGCTACGAAGATGAGTACTGGCAGCATAGCAGTGCTGAAACTGGGAGGCCGCGTGGTCTAATGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429093.6
3UTR TCA 72 bp GTCTTTGCGTATATGCAGTATACTCGTGGCGATCAGTaGACGCGTCGTGAATGGAAACGAAACTGTAGGCGA +
Preference number: 3 (lower is better)
Translates to: VFAYMQYTRGDQ*TRREWKRNCRR
Trigger: TCGCCTACAGTTTCGTTTCCATTCACGACGCGTTCACTGATCGCCACGAGTATACTGCATATACGCAAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR TCA 72 bp AGGAGAAGTCATCCTAGTCAGGTGGTGGTAAAAAGGTaGGAAGAAACTTGGGACAAGAAGGCTGAAGATGGG +
Preference number: 3 (lower is better)
Translates to: RRSHPSQVVVKR*EETWDKKAEDG
Trigger: CCCATCTTCAGCCTTCTTGTCCCAAGTTTCTTCTCACCTTTTTACCACCACCTGACTAGGATGACTTCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR-3UTR CAA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACGCGAGCTTCTGCGTGTaGCTCACTCAACACCTCCTC +
Preference number: 3 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYASFCV*LTQHLL
Trigger: GAGGAGGTGTTGAGTGAGCAACACGCAGAAGCTCGC...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR GCA 72 bp TTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTaGCCTCTCCGATCAATCCCTCCACCCGATAAATTT +
Preference number: 3 (lower is better)
Translates to: FSNPVLVLNLRI*PLRSIPPPDKF
Trigger: AAATTTATCGGGTGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
3UTR TCA 72 bp TATATTAAGCTTGTAACCAAGGGGAACAGAATATATTaGCAGTGGCAGGCTGGCATAAGGCTAGCCAATAAC +
Preference number: 3 (lower is better)
Translates to: YIKLVTKGNRIY*QWQAGIRLANN
Trigger: GTTATTGGCTAGCCTTATGCCAGCCTGCCACTGTCAATATATTCTGTTCCCCTTGGTTACAAGCTTAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR TCA 72 bp ATAAGGCATGATGGAGAGGGTGCAATTGATGAGGTCTaGTACATAAAGCAAAGTCAATTCCTTCCTGAGATG +
Preference number: 3 (lower is better)
Translates to: IRHDGEGAIDEV*YIKQSQFLPEM
Trigger: CATCTCAGGAAGGAATTGACTTTGCTTTATGTATCAGACCTCATCAATTGCACCCTCTCCATCATGCCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
3UTR-3UTR CAA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGAGGTCAAGAGTAAATTaGGGTACACCTGTCTCTATA +
Preference number: 3 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLRSRVN*GTPVSI
Trigger: TATAGAGACAGGTGTACCCAAATTTACTCTTGACCT...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCTCCAGTGCCCCAGCTaGCATGAGCGGCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSLQCPS*HERPRQ
Trigger: TTGCCTGGGCCGCTCATGGCAGCTGGGGCACTGGAG...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAACATGGAGGTCGCAGGTaGCCCCGGCAACTCCATCGC +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPEHGGRR*PRQLHR
Trigger: GCGATGGAGTTGCCGGGGCCACCTGCGACCTCCATG...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAAGGTAGAAAGGGGCCCTaGCAACTCTGGCACCGGGGT +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPEGRKGP*QLWHRG
Trigger: ACCCCGGTGCCAGAGTTGCCAGGGCCCCTTTCTACC...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCCAGCCCTGGCAACTCTaGCACCCCAGTCACCGAAGG +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSQPWQL*HPSHRR
Trigger: CCTTCGGTGACTGGGGTGCCAGAGTTGCCAGGGCTG...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAACTCCAGCACCATCGTTaGCTCAGGCTGCCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPELQHHR*LRLPQQ
Trigger: TTGCTGGGGCAGCCTGAGGCAACGATGGTGCTGGAG...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCCCTGCAACTCCGGCATaGAGGTCGCAGGTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: TYNDLFQSSSCVEPEDLPPATPA*RSQVAP
Trigger: CGGGGCCACCTGCGACCTCCATGCCGGAGTTGCAGG...GGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCCGCTGTCGTTGCCACTaGCTGTCCTGGCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSRCRCH*LSWQLQ
Trigger: CTGGAGTTGCCAGGACAGCCAGTGGCAACGACAGCG...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCTGCCCAGGCAACTCTaGCGCCCCAGGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QPTMTFSNPVLVLNLRICLPRQL*RPRLPW
Trigger: CCAGGGCAGCCTGGGGCGCCAGAGTTGCCTGGGCAG...GCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACCCTGGCAACTCCTGTaGCATCACAGGTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPPWQLL*HHRWLW
Trigger: CCAGAGCCACCTGTGATGGCACAGGAGTTGCCAGGG...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCGTCATCCCCACAGGCTaGTCCAACTCTGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSVIPTG*SNSVVV
Trigger: GACGACGACAGAGTTGGAGCAGCCTGTGGGGATGAC...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAACCCCAGCAACCCTGTTaGCGTTGTCACCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPEPQQPC*RCHLRM
Trigger: CATCCTGAGGTGACAACGGCAACAGGGTTGCTGGGG...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGCCTGCAACTCCGGCATaGAGGTCGCAGGTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKPATPA*RSQVAP
Trigger: CGGGGCCACCTGCGACCTCCATGCCGGAGTTGCAGG...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCTGCTGGACCCTCTGGTaGTTCCTCAGGAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSCWTLW*FLRRQW
Trigger: CCATTGCCTCCTGAGGAACCACCAGAGGGTCCAGCA...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCTCAGTGGGCAATGCTaGACCCTCTGGTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSLSGQC*TLWWFL
Trigger: GAGGAACCACCAGAGGGTCCAGCATTGCCCACTGAG...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCCCGACTCCGACGACTTaGGGTTCGACTTCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSPTPTT*GSTSSS
Trigger: AGAGCTCGAAGTCGAACCCCAAGTCGTCGGAGTCGG...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTCGGCAACTCCATCGCTaGGGCCACCGACGACTCCTG +
Preference number: 4 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLARQLHR*GHRRLL
Trigger: CAGGAGTCGTCGGTGGCCTCAGCGATGGAGTTGCCG...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCCGACACGGTCATCGTTaGCAGCTCCGATGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSRHGHR*QLRCCH
Trigger: GTGACAACATCGGAGCTGTCAACGATGACCGTGTCG...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAACGACACGGTCATCGTTaGCAGCTCCGATGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPERHGHR*QLRCCH
Trigger: GTGACAACATCGGAGCTGTCAACGATGACCGTGTCG...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCTGGCAACTCTACTGCTaGTGTCACCAAAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSWQLYC*CHQRQP
Trigger: GGGCTGCCTTTGGTGACAGCAGCAGTAGAGTTGCCA...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp ACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCACAGTTGCCACAGGCTaGCCAGGCAACTCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: TYNDLFQSSSCVEPEDLPTVATG*PGNSGA
Trigger: GGCGCCAGAGTTGCCTGGGCAGCCTGTGGCAACTGT...GGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACTGCTCAGTGGGCAATaGTGGACCCTCTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPLLSGQ*WTLWWF
Trigger: GAACCACCAGAGGGTCCAGCATTGCCCACTGAGCAG...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCTTCCTGCGACAACTGTaGCACTGGTGTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSFLRQL*HWCHRG
Trigger: CCCTCTGTGACACCAGTGCCACAGTTGTCGCAGGAA...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAATTCCTGCGACAACTGTaGCACTGGTGTCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPEFLRQL*HWCHRG
Trigger: CCCTCTGTGACACCAGTGCCACAGTTGTCGCAGGAA...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp GTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACCCGATAAATTTCTCCAACCCCATGGATaGTGCTGGAAGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: VLNLRICPLRSIPPPDKFLQPHG*CWKPWQ
Trigger: TTGCCAGGGCTTCCAGCACCATCCATGGGGTTGGAG...AAATTTATCGGGTGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCTACCGCAGGCTGCTCTaGCAACTCTACTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSYRRLL*QLYCCC
Trigger: ACAGCAGCAGTAGAGTTGCCAGAGCAGCCTGCGGTA...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCATGCTGGACCCTCTGGTaGTTCCTCAGGAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPCWTLW*FLRRQW
Trigger: CCATTGCCTCCTGAGGAACCACCAGAGGGTCCAGCA...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp ACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCACTCTGGGGCAGCCATaGCTGGCGGCTCCAGAATGC +
Preference number: 4 (lower is better)
Translates to: TYNDLFQSSSCVEPEDLPTLGQP*LAAPEC
Trigger: GCATTCTGGAGCCGCCAGCCATGGCTGCCCCAGAGT...GGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCGGGGCTCTACCAACATaGTCTTTGATGGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSGALPT*SLMALE
Trigger: CTCCAGAGCCATCAAAGATCATGTTGGTAGAGCCCC...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAATTGGGACAAGAAGGCTaGAGATGGGGCCGAAAACAG +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPELGQEG*RWGRKQ
Trigger: CTGTTTTCGGCCCCATCTTCAGCCTTCTTGTCCCAA...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCGGTACGTCTACAGGCTaGTCTGGCAATCTTAGCGCT +
Preference number: 4 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSGTSTG*SGNLSA
Trigger: AGCGCTAAGATTGCCAGAGCAGCCTGTAGACGTACC...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCAGCTCCGGCAACTCCTaGGGTCTTGTCATGGATGAA +
Preference number: 4 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSSSGNS*GLVMDE
Trigger: TTCATCCATGACAAGACCGCAGGAGTTGCCGGAGCT...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTCACCGAAGGCTaGCCCGGCAACTCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNPVTEG*PGNSSA
Trigger: AGCGCTGGAGTTGCCGGGGCAGCCTTCGGTGACTGG...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp TACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGCCCCGAGAACTCCAGTaGCCCAGCTGCCATGAGCGG +
Preference number: 4 (lower is better)
Translates to: YPRCSHQPTMTFSNPVLVPRELQ*PSCHER
Trigger: CCGCTCATGGCAGCTGGGGCACTGGAGTTCTCGGGG...CACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATCCCCGAGAACTCCAGTaGCCCAGCTGCCATGAGCGG +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHPRELQ*PSCHER
Trigger: CCGCTCATGGCAGCTGGGGCACTGGAGTTCTCGGGG...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCACAGTTGCCACAGGCTaGCCAGGCAACTCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGTVATG*PGNSGA
Trigger: GGCGCCAGAGTTGCCTGGGCAGCCTGTGGCAACTGT...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp ATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCCTCCAGCGCCACAGTTaGCACAGGCTGCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: MGYVPKMLTSTYNDLFQSLQRHS*HRLPRQ
Trigger: TTGCCTGGGCAGCCTGTGGCAACTGTGGCGCTGGAG...GGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGCTCCAGCGCCACAGTTaGCACAGGCTGCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKLQRHS*HRLPRQ
Trigger: TTGCCTGGGCAGCCTGTGGCAACTGTGGCGCTGGAG...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp ACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCCTGGCGGCTCCAGAATaGTCTCTGCCAGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: TYNDLFQSSSCVEPEDLPLAAPE*SLPALE
Trigger: CTCCAGTGCTGGCAGAGAGCATTCTGGAGCCGCCAG...GGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACTACCTTCCCACAAGTaGAGGGAGGGCCCAATGTTG +
Preference number: 4 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPLPSHK*REGPML
Trigger: CAACATTGGGCCCTCCCTGCACTTGTGGGAAGGTAG...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp TATGCTGCCAGTACTCATCTTCGTAGCACGAGGCGTCCATTCTCTCCCTTGATTGGCCTCCCAACCACTTaGTGTAACCAGCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: YAASTHLRSTRRPFSPLIGLPTT*CNQQLT
Trigger: TGTCAGCTGCTGGTTACAGCAAGTGGTTGGGAGGCC...AATCAAGGGAGAGAATGGACGCCTCGTGCTACGAAGATGAGTACTGGCAGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429093.6
CDS-3UTR GCA 90 bp TCCAGTCCCATGGCAAGATCACCACATGCAGAGCTAATACTAGGGCCTCCCAACGGCAAGATCACCACATaGAGAGCTAATACTAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSPMARSPHAELILGPPNGKITT*RANTRA
Trigger: GGCCCTAGTATTAGCTCTGCATGTGGTGATCTTGCC...GTTGGGAGGCCCTAGTATTAGCTCTGCATGTGGTGATCTTGCCATGGGACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429093.6
CDS-3UTR GCA 90 bp CAATCCATTAGACCACGCGGCCTCCCAGTTTCAGCACTGCTATGCTGCCAGTACGTTTCAGCACTGCTATaGTGCCAGTACTCATCTTCG +
Preference number: 4 (lower is better)
Translates to: QSIRPRGLPVSALLCCQYVSALL*CQYSSS
Trigger: CGAAGATGAGTACTGGCAGCATAGCAGTGCTGAAAC...GTACTGGCAGCATAGCAGTGCTGAAACTGGGAGGCCGCGTGGTCTAATGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429093.6
CDS-3UTR CCA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCATACCGCAGGCTGCTCTaGCAACTCTACTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPYRRLL*QLYCCC
Trigger: ACAGCAGCAGTAGAGTTGCCAGAGCAGCCTGCGGTA...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGCAGCCCTGGCAACTCTaGCACCCCAGTCACCGAAGG +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKQPWQL*HPSHRR
Trigger: CCTTCGGTGACTGGGGTGCCAGAGTTGCCAGGGCTG...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AAACCATCATTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACTGGGGCAGCCATGGCTaGCGGCTCCAGAATGCTCTC +
Preference number: 4 (lower is better)
Translates to: KPSLRAMGYVPKMLTSTYWGSHG*RLQNAL
Trigger: GAGAGCATTCTGGAGCCGCCAGCCATGGCTGCCCCA...GTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAATGATGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTACTCTGGGGCAGCCATaGCTGGCGGCTCCAGAATGC +
Preference number: 4 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLATLGQP*LAAPEC
Trigger: GCATTCTGGAGCCGCCAGCCATGGCTGCCCCAGAGT...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGTCTTCTCCGGCGGCTTaGGGTGCGGCTCCGACGGCT +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLSSPAA*GAAPTA
Trigger: AGCCGTCGGAGCCGCACCCCAAGCCGCCGGAGAAGA...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCAGGGGCTCTACCAACATaGTCTTTGATGGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPGALPT*SLMALE
Trigger: CTCCAGAGCCATCAAAGATCATGTTGGTAGAGCCCC...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp GTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACCCGATAAATTTTCCGAAATCTCACTTTaGCTCACAGGAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VLNLRICPLRSIPPPDKFSEISL*LTGGSG
Trigger: GCCTGAGCCTCCTGTGAGTCAAAGTGAGATTTCGGA...AAATTTATCGGGTGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACACAGTTGGTTCAGCTaGCATGGCGGGAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPHSWFS*HGGSFR
Trigger: TCTGAAACTCCCGCCATGTCAGCTGAACCAACTGTG...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCCTCAGATGGGCCAAATaGTCTTGTAGGAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSLRWAK*SCRKLQ
Trigger: CTGGAGCTTCCTACAAGAGCATTTGGCCCATCTGAG...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAATGTAGTAGGCACTGGTaGTGCTGCAAAGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPECSRHW*CCKGIQ
Trigger: CTGGATTCCTTTGCAGCAGCACCAGTGCCTACTACA...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCAAGCTCCGGCAACTCCTaGGGTCTTGTCATGGATGAA +
Preference number: 4 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPSSGNS*GLVMDE
Trigger: TTCATCCATGACAAGACCGCAGGAGTTGCCGGAGCT...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCGCCACCGACGACTCCTaGAGCTCCAACGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVATDDS*SSNAVV
Trigger: GACCACAGCGTTGGAGCTGCAGGAGTCGTCGGTGGC...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGCCCTGGCAACTCCTGTaGCATCACAGGTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKPWQLL*HHRWLW
Trigger: CCAGAGCCACCTGTGATGGCACAGGAGTTGCCAGGG...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCTTCGGTCAACTCCATTaGTACTGTTACCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSFGQLH*YCYRRL
Trigger: CAGCCTGCGGTAACAGTAGCAATGGAGTTGACCGAA...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCATCGTTGCCTCAGGCTaGCCCAGCAACCCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGIVASG*PSNPVA
Trigger: GGCAACAGGGTTGCTGGGGCAGCCTGAGGCAACGAT...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGCCAGTCACCGAAGGCTaGCCCGGCAACTCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLPVTEG*PGNSSA
Trigger: AGCGCTGGAGTTGCCGGGGCAGCCTTCGGTGACTGG...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp ACCCAGAGAAACAGTAAGAAACCATCATTAAGGGCAATGGGCTATGTACCCAAGCTCCAGTGCCCTAGTTaGCGAAGGCAGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: TQRNSKKPSLRAMGYVPKLQCPS*RRQPWQ
Trigger: TTGCCAGGGCTGCCTTCGGCAACTAGGGCACTGGAG...CTTGGGTACATAGCCCATTGCCCTTAATGATGGTTTCTTACTGTTTCTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCCTCCAGTGCCCTAGTTaGCGAAGGCAGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGLQCPS*RRQPWQ
Trigger: TTGCCAGGGCTGCCTTCGGCAACTAGGGCACTGGAG...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp ACCCAGAGAAACAGTAAGAAACCATCATTAAGGGCAATGGGCTATGTACCCAAGCCCCGACAACTCCAGTaGCCTAGTTGCCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TQRNSKKPSLRAMGYVPKPRQLQ*PSCRRQ
Trigger: CTGCCTTCGGCAACTAGGGCACTGGAGTTGTCGGGG...CTTGGGTACATAGCCCATTGCCCTTAATGATGGTTTCTTACTGTTTCTCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp TACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGCTCCAGTGCTCCAGCTaGCCCAGACTGCCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: YPRCSHQPTMTFSNPVLVLQCSS*PRLPRE
Trigger: TTCTCGGGGCAGTCTGGGGCAGCTGGAGCACTGGAG...CACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATCTCCAGTGCTCCAGCTaGCCCAGACTGCCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHLQCSS*PRLPRE
Trigger: TTCTCGGGGCAGTCTGGGGCAGCTGGAGCACTGGAG...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCCCTATATGGCCTGGGTaGTATTCTATAGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSPIWPG*YSIGPG
Trigger: CCCAGGTCCTATAGAATAGCACCCAGGCCATATAGG...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCCTGGCGGCTCCAGAATaGTCTCTGCCAGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGLAAPE*SLPALE
Trigger: CTCCAGTGCTGGCAGAGAGCATTCTGGAGCCGCCAG...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCGATGTTGGTCGCCATaGCGTCCGCTCCGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QPTMTFSNPVLVLNLRICRCWSP*RPLRSL
Trigger: GAGAGAACGGAGCGGACGCCATGGCGACCAACATCG...GCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCCCTGCGGTCTTGTCATaGATGAATCTGCAATCTCCG +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSPAVLS*MNLQSP
Trigger: CGGAGATTGCAGATTCATCCATGACAAGACCGCAGG...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGGGTAGAAAGGGGCCCTaGCAACTCTGGCACCGGGGT +
Preference number: 4 (lower is better)
Translates to: SHQPTMTFSNPVLVLNLRGRKGP*QLWHRG
Trigger: ACCCCGGTGCCAGAGTTGCCAGGGCCCCTTTCTACC...CCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AAACCATCATTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACCGACAACTGTGGCACTaGTGTCACAGAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KPSLRAMGYVPKMLTSTYRQLWH*CHRGPW
Trigger: CCAGGGCCCTCTGTGACACCAGTGCCACAGTTGTCG...GTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAATGATGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTCGCTGTCGTTGCCACTaGCTGTCCTGGCAACTCCAG +
Preference number: 4 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLARCRCH*LSWQLQ
Trigger: CTGGAGTTGCCAGGACAGCCAGTGGCAACGACAGCG...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACCTGCCCAGGCAACTCTaGCGCCCCAGGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYLPRQL*RPRLPW
Trigger: CCAGGGCAGCCTGGGGCGCCAGAGTTGCCTGGGCAG...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCAGATCGATCAGCCATTaGGGACATCATGGAGCGTTC +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSRSISH*GHHGAF
Trigger: GAACGCTCCATGATGTCCCCAATGGCTGATCGATCT...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATTGGGGCAGCCATGGCTaGCGGCTCCAGAATGCTCTC +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHWGSHG*RLQNAL
Trigger: GAGAGCATTCTGGAGCCGCCAGCCATGGCTGCCCCA...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAATCTTCTCCGGCGGCTTaGGGTGCGGCTCCGACGGCT +
Preference number: 4 (lower is better)
Translates to: KMLTSTYNDLFQSSSCVESSPAA*GAAPTA
Trigger: AGCCGTCGGAGCCGCACCCCAAGCCGCCGGAGAAGA...TTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp GCCAGTACTCATCTTCGTAGCACGAGGCGTCCATTCTCTCCCTTGATTTTAGGTAGGCTTCCAGTCCCATaGCAAGATCACCACATGCAG +
Preference number: 4 (lower is better)
Translates to: ASTHLRSTRRPFSPLILGRLPVP*QDHHMQ
Trigger: CTGCATGTGGTGATCTTGCCATGGGACTGGAAGCCT...ACCTAAAATCAAGGGAGAGAATGGACGCCTCGTGCTACGAAGATGAGTACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429093.6
CDS-3UTR TCA 90 bp AAACCATCATTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACCAGGACAGCCATAGCTaGAGACTCTGGGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: KPSLRAMGYVPKMLTSTYQDSHS*RLWGSH
Trigger: ATGGCTGCCCCAGAGTCTTCAGCTATGGCTGTCCTG...GTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAATGATGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCCAGGACAGCCATAGCTaGAGACTCTGGGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGQDSHS*RLWGSH
Trigger: ATGGCTGCCCCAGAGTCTTCAGCTATGGCTGTCCTG...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCGGGAACAGAATATATTaGCAGTGGCAGGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSGNRIY*QWQAGI
Trigger: TATGCCAGCCTGCCACTGTCAATATATTCTGTTCCC...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCAGGCACTGGTGCTGCTaGAAAGGAATCCAGAATCTT +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSRHWCC*KGIQNL
Trigger: AAGATTCTGGATTCCTTTGCAGCAGCACCAGTGCCT...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCCCATTGTTGTTGATGTaGTTGGCTCAGGGTACACCT +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSPLLLM*LAQGTP
Trigger: AGGTGTACCCTGAGCCAAGCACATCAACAACAATGG...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGGTCATCCCCACAGGCTaGTCCAACTCTGTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKVIPTG*SNSVVV
Trigger: GACGACGACAGAGTTGGAGCAGCCTGTGGGGATGAC...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGCTCCAGCACCATCGTTaGCTCAGGCTGCCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: YPRCSHQPTMTFSNPVLVLQHHR*LRLPQQ
Trigger: TTGCTGGGGCAGCCTGAGGCAACGATGGTGCTGGAG...CACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCCTCCAGCGCTGTCGTTaGCACTGGCTGTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVLQRCR*HWLSWQ
Trigger: TTGCCAGGACAGCCAGTGGCAACGACAGCGCTGGAG...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATCCCCGACAACTCCAGTaGCCTAGTTGCCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHPRQLQ*PSCRRQ
Trigger: CTGCCTTCGGCAACTAGGGCACTGGAGTTGTCGGGG...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CTTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCACTCCAGTGCCCCAGCTaGCATGAGCGGCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LAVFMCTIFSSTLFNQAALQCPS*HERPRQ
Trigger: TTGCCTGGGCCGCTCATGGCAGCTGGGGCACTGGAG...TGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGCTGCTCAGTGGGCAATaGTGGACCCTCTGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKLLSGQ*WTLWWF
Trigger: GAACCACCAGAGGGTCCAGCATTGCCCACTGAGCAG...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCATTGAACCTGAGGATCTaGCCTCTCCGATCAATCCCT +
Preference number: 4 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPLNLRI*PLRSIP
Trigger: AGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAA...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATCGATGTTGGTCGCCATaGCGTCCGCTCCGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHRCWSP*RPLRSL
Trigger: GAGAGAACGGAGCGGACGCCATGGCGACCAACATCG...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp GTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACCCGATAAATTTATCTGCAATCTCCGATaGTACGTCTACAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VLNLRICPLRSIPPPDKFICNLR*YVYRLL
Trigger: GAGCAGCCTGTAGACGTACCATCGGAGATTGCAGAT...AAATTTATCGGGTGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATCGACAACTGTGGCACTaGTGTCACAGAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHRQLWH*CHRGPW
Trigger: CCAGGGCCCTCTGTGACACCAGTGCCACAGTTGTCG...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ACCCAGAGAAACAGTAAGAAACCATCATTAAGGGCAATGGGCTATGTACCCAAGTGGTACCTCCTGTGGTaGCTCCAACCCCATGGATGG +
Preference number: 4 (lower is better)
Translates to: TQRNSKKPSLRAMGYVPKWYLLW*LQPHGW
Trigger: CCATCCATGGGGTTGGAGCCACCACAGGAGGTACCA...CTTGGGTACATAGCCCATTGCCCTTAATGATGGTTTCTTACTGTTTCTCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCACCAAAGGCAGCCCTaGCAACTCCTGTGCCATCAC +
Preference number: 4 (lower is better)
Translates to: QPTMTFSNPVLVLNLRICHQRQP*QLLCHH
Trigger: GTGATGGCACAGGAGTTGCCAGGGCTGCCTTTGGTG...GCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp ACCCAGAGAAACAGTAAGAAACCATCATTAAGGGCAATGGGCTATGTACCCAAGTGGTGGTGTCATTGGTaGCTCCTCAGGTGGCAACGG +
Preference number: 4 (lower is better)
Translates to: TQRNSKKPSLRAMGYVPKWWCHW*LLRWQR
Trigger: CCGTTGCCACCTGAGGAGCCACCAATGACACCACCA...CTTGGGTACATAGCCCATTGCCCTTAATGATGGTTTCTTACTGTTTCTCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp ACCCAGAGAAACAGTAAGAAACCATCATTAAGGGCAATGGGCTATGTACCCAAGCTCAGTGGGCAATGCTaGACCCTCTGGTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TQRNSKKPSLRAMGYVPKLSGQC*TLWWFL
Trigger: GAGGAACCACCAGAGGGTCCAGCATTGCCCACTGAG...CTTGGGTACATAGCCCATTGCCCTTAATGATGGTTTCTTACTGTTTCTCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCTTGGTTCAGCTGACATaGCGGGAGTTTCAGATACCA +
Preference number: 4 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSLVQLT*REFQIP
Trigger: TGGTATCTGAAACTCCCGCCATGTCAGCTGAACCAA...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp TTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATCGGCAACTCCATCGCTaGGGCCACCGACGACTCCTG +
Preference number: 4 (lower is better)
Translates to: LLFSCALYLAAHYLIRRHRQLHR*GHRRLL
Trigger: CAGGAGTCGTCGGTGGCCTCAGCGATGGAGTTGCCG...ATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGGTTGTCACCACAGACTaGACAGAGATCTCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKVVTTD*TEISSA
Trigger: GGCGCTGGAGATCTCTGTTCAGTCTGTGGTGACAAC...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAAGGGATCAGGAGATTTTaGACCCAACATAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPEGIRRF*TQHSRI
Trigger: GATTCTGCTATGTTGGGTTCAAAATCTCCTGATCCC...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp ACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCCCTGTAGGGTCTAGGTaGCATCCTATAGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: TYNDLFQSSSCVEPEDLPPVGSR*HPIGIR
Trigger: CCTGATCCCTATAGGATGTCACCTAGACCCTACAGG...GGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp CTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATTTTAACCCGGCCCTCTaGGGGCAAATTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LFQSSSCVEPEDLPSPINFNPAL*GQIAAE
Trigger: TTCAGCAGCAATTTGCCCTCAGAGGGCCGGGTTAAA...ATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACGAGTTACTGTCAAATaGGAAGCTGCGGGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPRVTVK*EAAGCF
Trigger: GAAACAACCCGCAGCTTCTCATTTGACAGTAACTCG...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp TTTGTCATGAAATTAGTGGTTCTCAAATTGAGCCTGTGGATCACCAGAGGCCACGCTGTAACCAGCAGCTaGCAACCAAAAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FVMKLVVLKLSLWITRGHAVTSS*QPKGPG
Trigger: CCCAGGACCTTTTGGTTGTCAGCTGCTGGTTACAGC...GTGGCCTCTGGTGATCCACAGGCTCAATTTGAGAACCACTAATTTCATGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429093.6
CDS-3UTR GCA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCAATGGCTCTGGAGATGTaGTCTCCACAGATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPMALEM*SPQISA
Trigger: TGCTGAAATCTGTGGAGAGCACATCTCCAGAGCCAT...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CTTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCAGCCACCGACGACTCCTaGAGCTCCAACGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LAVFMCTIFSSTLFNQAAATDDS*SSNAVV
Trigger: GACCACAGCGTTGGAGCTGCAGGAGTCGTCGGTGGC...TGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGCAACCCCATGGATGGTaGTGGAAGCCCTGGCAATTC +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKQPHGW*WKPWQF
Trigger: GAATTGCCAGGGCTTCCAGCACCATCCATGGGGTTG...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGCCTGTTGCCAGAGGCTaGCCCAAAAGCTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SHQPTMTFSNPVLVLNLRPVARG*PKSSSA
Trigger: AGCACTGGAGCTTTTGGGGCAGCCTCTGGCAACAGG...CCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGGCACCTCCAGGGACTaGGACACGGTCATCGTTGAC +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYGTSRD*DTVIVD
Trigger: GTCAACGATGACCGTGTCGCAGTCCCTGGAGGTGCC...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTGCTGCTTCTCCTCCTaGGTCTTGAACGTGACCGTG +
Preference number: 4 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLACCFSS*VLNVTV
Trigger: CACGGTCACGTTCAAGACGCAGGAGGAGAAGCAGCA...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCCGAGCTTCTGCGTGTTaGTCACTCAACACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGRASAC*SLNTSS
Trigger: GGAGGAGGTGTTGAGTGAGCAACACGCAGAAGCTCG...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCCGCATCTACTTTTTCTaGAGCCCTCTTTCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSRIYFF*SPLSSL
Trigger: CAGACTTGAAAGAGGGCTCCAGAAAAAGTAGATGCG...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCGCATCTACTTTTTCTaGAGCCCTCTTTCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSRIYFF*SPLSSL
Trigger: CAGACTTGAAAGAGGGCTCCAGAAAAAGTAGATGCG...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp TTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATCATGGAGGTCGCAGGTaGCCCCGGCAACTCCATCGC +
Preference number: 4 (lower is better)
Translates to: LLFSCALYLAAHYLIRRHHGGRR*PRQLHR
Trigger: GCGATGGAGTTGCCGGGGCCACCTGCGACCTCCATG...ATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGCCCCATGGATGGTGCTaGAAGCCCTGGCAATTCCTG +
Preference number: 4 (lower is better)
Translates to: YPRCSHQPTMTFSNPVLVPHGWC*KPWQFL
Trigger: CAGGAATTGCCAGGGCTTCCAGCACCATCCATGGGG...CACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATCTCCAACCCCATGGATaGTGCTGGAAGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHLQPHG*CWKPWQ
Trigger: TTGCCAGGGCTTCCAGCACCATCCATGGGGTTGGAG...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAACTAACCTATATGGCCTaGGTGCTATTCTATAGGACC +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPELTYMA*VLFYRT
Trigger: GGTCCTATAGAATAGCACCCAGGCCATATAGGTTAG...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCATTCAGGAGGCAAAGGTaGCACCATATATGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPFRRQR*HHICLC
Trigger: ACAGAGGCATATATGGTGCCACCTTTGCCTCCTGAA...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGCTCAGGTGGCAACGGTaGCATTGTTGGGGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SHQPTMTFSNPVLVLNLRLRWQR*HCWGLF
Trigger: GAAGAGCCCCCAACAATGCCACCGTTGCCACCTGAG...CCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTGGTGGCTCCTCAGGTaGCAACGGTGGCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: YPRCSHQPTMTFSNPVLVWWLLR*QRWHCW
Trigger: CCAACAATGCCACCGTTGCCACCTGAGGAGCCACCA...CACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCTGGTGGTGTCATTGGTaGCTCCTCAGGTGGCAACGG +
Preference number: 4 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVWWCHW*LLRWQR
Trigger: CCGTTGCCACCTGAGGAGCCACCAATGACACCACCA...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ACCCAGAGAAACAGTAAGAAACCATCATTAAGGGCAATGGGCTATGTACCCAAGCTCAGGAGGCAATGGTaGTGTCATTGGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TQRNSKKPSLRAMGYVPKLRRQW*CHWWLL
Trigger: GAGGAGCCACCAATGACACCACCATTGCCTCCTGAG...CTTGGGTACATAGCCCATTGCCCTTAATGATGGTTTCTTACTGTTTCTCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGCTCTGGTGGTGGTTCTaGAACAGTCACAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKLWWWF*NSHSSL
Trigger: GAGGCTGCTGTGACTGTTCCAGAACCACCACCAGAG...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCATACAACTGGCTCAGATaGCTTCAACACCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPYNWLR*LQHQCC
Trigger: ACAACACTGGTGTTGAAGTCATCTGAGCCAGTTGTA...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAAAAAATCCATTGTTGTTaGTGTGCTTGGCTCAGGGTA +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPEKIHCC*CAWLRV
Trigger: TACCCTGAGCCAAGCACATCAACAACAATGGATTTT...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCCCTGTAGGGTCTAGGTaGCATCCTATAGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGPVGSR*HPIGIR
Trigger: CCTGATCCCTATAGGATGTCACCTAGACCCTACAGG...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCATCAGCAGTATAAGATaGCATCATAGATCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSISSIR*HHRSVS
Trigger: GCTGACCGATCTATGATGTCATCTTATACTGCTGAT...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AAACCATCATTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAGAAGGTTGAAGGACTaGCACCGCTGGTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: KPSLRAMGYVPKMLTSTYRRLKD*HRWFQN
Trigger: GTTCTGGAACCAGCGGTGTCAGTCCTTCAACCTTCT...GTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAATGATGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp GTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACCCGATAAATTTTCAGTTGGTATTACTTaGGTCTGCTCTGAGACTGTG +
Preference number: 4 (lower is better)
Translates to: VLNLRICPLRSIPPPDKFSVGIT*VCSETV
Trigger: CACAGTCTCAGAGCAGACTCAAGTAATACCAACTGA...AAATTTATCGGGTGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACTGGTACGCTTGCGTaGTTTGTGTTCAGAAGATTT +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSTGTLA*FVFRRF
Trigger: AAATCTTCTGAACACAAATCACGCAAGCGTACCAGT...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAAACTGGTACGCTTGCGTaGTTTGTGTTCAGAAGATTT +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPETGTLA*FVFRRF
Trigger: AAATCTTCTGAACACAAATCACGCAAGCGTACCAGT...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCCTTGGTTCCACAAAGTaGATTGCATCGAGTTACTGT +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSLGSTK*IASSYC
Trigger: ACAGTAACTCGATGCAATTCACTTTGTGGAACCAAG...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAAAAAGACCTAAAAATCTaGTCGATGTTGGTCGCCATG +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPEKDLKI*SMLVAM
Trigger: CATGGCGACCAACATCGAGCAGATTTTTAGGTCTTT...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCACAGACTGCTCTGACTaGTCTGAGATTACTGATGTA +
Preference number: 4 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSTDCSD*SEITDV
Trigger: TACATCAGTAATCTCAGAGCAGTCAGAGCAGTCTGT...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp ATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCGGTACGTCTACAGGCTaGTCTGGCAATCTTAGCGCT +
Preference number: 4 (lower is better)
Translates to: MGYVPKMLTSTYNDLFQSGTSTG*SGNLSA
Trigger: AGCGCTAAGATTGCCAGAGCAGCCTGTAGACGTACC...GGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp GCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTAGCCCTGGCAATTCCTaGGACAACTGTGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: AMYPRCSHQPTMTFSNPVSPGNS*DNCGTG
Trigger: ACCAGTGCCACAGTTGTCGCAGGAATTGCCAGGGCT...AACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AAACCATCATTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACCTCTGGCAACTCTACTaGTGCTGTCACCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KPSLRAMGYVPKMLTSTYLWQLY*CCHQRQ
Trigger: CTGCCTTTGGTGACAGCAGCAGTAGAGTTGCCAGAG...GTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAATGATGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACTCCAGCGCTGTCGTTaGCACTGGCTGTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KMLTSTYNDLFQSSSCVELQRCR*HWLSWQ
Trigger: TTGCCAGGACAGCCAGTGGCAACGACAGCGCTGGAG...TTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCCTTACTAGTTCCTGTTaGATCAGGTTCCAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSLTSSC*IRFQSK
Trigger: TTTGCTCTGGAACCTGATGCAACAGGAACTAGTAAG...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCATTCACTGGTACGCTTaGGTGATTTGTGTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSIHWYA*VICVQK
Trigger: CTTCTGAACACAAATCACGCAAGCGTACCAGTGAAT...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp TGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATTTTAATGGGGTTCGTCTAACCCGGCCCTaGCGTTTAACCCGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: CALYLAAHYLIRRHFNGVRLTRP*RLTRPS
Trigger: AGAGGGCCGGGTTAAACGGCAGGGCCGGGTTAGACG...AACCCCATTAAAATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCAAATCTGCTCGATGTTaGTCGCCATGGCGTCCGCTC +
Preference number: 4 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVKSARC*SPWRPL
Trigger: GAGCGGACGCCATGGCGACCAACATCGAGCAGATTT...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp GTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACCCGATAAATTTTTCATTGGTCTCAGATaGGCCAAATGCTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: VLNLRICPLRSIPPPDKFFIGLR*AKCSCR
Trigger: CCTACAAGAGCATTTGGCCCATCTGAGACCAATGAA...AAATTTATCGGGTGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAACCAGAATCTTTGTCATaGATGGTTCTGGCATTACTG +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPEPESLS*MVLALL
Trigger: CAGTAATGCCAGAACCATCCATGACAAAGATTCTGG...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATTGGTGCTGGAAGCCCTaGCAATTCCTGCGACAACTG +
Preference number: 4 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNWCWKP*QFLRQL
Trigger: CAGTTGTCGCAGGAATTGCCAGGGCTTCCAGCACCA...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGCCCCATGGATGGTGCTaGAAGCCCTGGCAATTCCTG +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLPHGWC*KPWQFL
Trigger: CAGGAATTGCCAGGGCTTCCAGCACCATCCATGGGG...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGTGGTACCTCCTGTGGTaGCTCCAACCCCATGGATGG +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLWYLLW*LQPHGW
Trigger: CCATCCATGGGGTTGGAGCCACCACAGGAGGTACCA...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATCACCAAAGGCAGCCCTaGCAACTCCTGTGCCATCAC +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYHQRQP*QLLCHH
Trigger: GTGATGGCACAGGAGTTGCCAGGGCTGCCTTTGGTG...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGTGGTGGCTCCTCAGGTaGCAACGGTGGCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLWWLLR*QRWHCW
Trigger: CCAACAATGCCACCGTTGCCACCTGAGGAGCCACCA...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATATGCTGACTGCTCAGTaGGCAATGCTGGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHMLTAQ*AMLDPL
Trigger: CAGAGGGTCCAGCATTGCCCACTGAGCAGTCAGCAT...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp GCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTCTGGTGGTGGTTCTaGAACAGTCACAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AMYPRCSHQPTMTFSNPVLWWWF*NSHSSL
Trigger: GAGGCTGCTGTGACTGTTCCAGAACCACCACCAGAG...AACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCAGTCACTGGTCTCTCTaGAACAACTTCATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSSHWSL*NNFMFF
Trigger: GAAGAACATGAAGTTGTTCCAGAGAGACCAGTGACT...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGGCTCTCTGCCAGCACTaGAGTAGTTACTGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKALCQH*SSYCWN
Trigger: GTTCCAGCAGTAACTACTCCAGTGCTGGCAGAGAGC...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATCCGACTCCGACGACTTaGGGTTCGACTTCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYPTPTT*GSTSSS
Trigger: AGAGCTCGAAGTCGAACCCCAAGTCGTCGGAGTCGG...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTGAGAGAGCACTGTACTaGGCACTGTCTGGGGAATAC +
Preference number: 4 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLAERALY*ALSGEY
Trigger: GTATTCCCCAGACAGTGCCCAGTACAGTGCTCTCTC...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AAACCATCATTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACCTCCAGCGCCACAGCTaGAGGTTCAGAATCAAACTT +
Preference number: 4 (lower is better)
Translates to: KPSLRAMGYVPKMLTSTYLQRHS*RFRIKL
Trigger: AAGTTTGATTCTGAACCTTCAGCTGTGGCGCTGGAG...GTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAATGATGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp GTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACCCGATAAATTTAGCACAGACTTCATCTaGTACTCCACTGACATTGTT +
Preference number: 4 (lower is better)
Translates to: VLNLRICPLRSIPPPDKFSTDFI*YSTDIV
Trigger: AACAATGTCAGTGGAGTATCAGATGAAGTCTGTGCT...AAATTTATCGGGTGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp GTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACCCGATAAATTTAAAATCCATTGTTGTTaGTGTGCTTGGCTCAGGGTA +
Preference number: 4 (lower is better)
Translates to: VLNLRICPLRSIPPPDKFKIHCC*CAWLRV
Trigger: TACCCTGAGCCAAGCACATCAACAACAATGGATTTT...AAATTTATCGGGTGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTCGGTCTTGTCATGGATaGATCTGCAATCTCCGATGG +
Preference number: 4 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLARSCHG*ICNLRW
Trigger: CCATCGGAGATTGCAGATTCATCCATGACAAGACCG...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATTCCGAAATCTCACTTTaGCTCACAGGAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHSEISL*LTGGSG
Trigger: GCCTGAGCCTCCTGTGAGTCAAAGTGAGATTTCGGA...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCAGTAGGCACTGCTaGAGGCTCCGAAATCTCACT +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKISRHC*RLRNLT
Trigger: AGTGAGATTTCGGAGCCTTCAGCAGTGCCTACTGAT...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AAACCATCATTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACTGTGACAGCAGGCTCTaGAACTGTCACAGTCGATTC +
Preference number: 4 (lower is better)
Translates to: KPSLRAMGYVPKMLTSTYCDSRL*NCHSRF
Trigger: GAATCGACTGTGACAGTTTCAGAGCCTGCTGTCACA...GTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAATGATGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCTGTGACAGCAGGCTCTaGAACTGTCACAGTCGATTC +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGCDSRL*NCHSRF
Trigger: GAATCGACTGTGACAGTTTCAGAGCCTGCTGTCACA...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGTGTCAGACGTTTGGGTaGTCTGCCTCGTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKCQTFG*SASFRR
Trigger: TCTTCTGAACGAGGCAGATCACCCAAACGTCTGACA...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCACTCGTGGCGATCAGTaGACGCGTCGTGAATGGAAA +
Preference number: 4 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVTRGDQ*TRREWK
Trigger: TTTCCATTCACGACGCGTTCACTGATCGCCACGAGT...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTGTAGTAGGCACTGGTaGTGCTGCAAAGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: LRAMGYVPKMLTSTYNDLCSRHW*CCKGIQ
Trigger: CTGGATTCCTTTGCAGCAGCACCAGTGCCTACTACA...AAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATAGCCCTGGCAATTCCTaGGACAACTGTGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYSPGNS*DNCGTG
Trigger: ACCAGTGCCACAGTTGTCGCAGGAATTGCCAGGGCT...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGTGGCAACTCTACTGCTaGTGTCACCAAAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLWQLYC*CHQRQP
Trigger: GGGCTGCCTTTGGTGACAGCAGCAGTAGAGTTGCCA...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATATCGTTGCCTCAGGCTaGCCCAGCAACCCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: LLFSCALYLAAHYLIRRHIVASG*PSNPVA
Trigger: GGCAACAGGGTTGCTGGGGCAGCCTGAGGCAACGAT...ATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp TTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATGGCACCTCCAGGGACTaGGACACGGTCATCGTTGAC +
Preference number: 4 (lower is better)
Translates to: LLFSCALYLAAHYLIRRHGTSRD*DTVIVD
Trigger: GTCAACGATGACCGTGTCGCAGTCCCTGGAGGTGCC...ATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGTCTATAGGACCTGGGTaGTATCCTGTAGGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKSIGPG*YPVGSR
Trigger: CCTAGACCCTACAGGATAGCACCCAGGTCCTATAGA...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTCCTATATGGCCTGGGTaGTATTCTATAGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLAPIWPG*YSIGPG
Trigger: CCCAGGTCCTATAGAATAGCACCCAGGCCATATAGG...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp ATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCGCTGTTAATGCTGACTaGTCAGTGGGCAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: MGYVPKMLTSTYNDLFQSAVNAD*SVGNAG
Trigger: TCCAGCATTGCCCACTGAGCAGTCAGCATTAACAGC...GGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp ACCCAGAGAAACAGTAAGAAACCATCATTAAGGGCAATGGGCTATGTACCCAAGACAGGAGGCTCAGGCTaGGATACAGACTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: TQRNSKKPSLRAMGYVPKTGGSG*DTDSSD
Trigger: ATCTGAAGAGTCTGTATCGCAGCCTGAGCCTCCTGT...CTTGGGTACATAGCCCATTGCCCTTAATGATGGTTTCTTACTGTTTCTCTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAAAACTTCATGTTCTTCTaGTACTACTGCAGACTCTAC +
Preference number: 4 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPENFMFF*YYCRLY
Trigger: GTAGAGTCTGCAGTAGTAGCAGAAGAACATGAAGTT...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp ATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCCTCCAGAATGCTCTCTaGCAGCACTGGAGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: MGYVPKMLTSTYNDLFQSLQNAL*QHWSSY
Trigger: GTAACTACTCCAGTGCTGGCAGAGAGCATTCTGGAG...GGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATGTTTCACCATTCAGCTaGCCTTCATTCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LFQSSSCVEPEDLPSPINVSPFS*PSFLPL
Trigger: CAGTGGAAGGAATGAAGGCCAGCTGAATGGTGAAAC...ATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGGCTGCATCACCCGCCTaGTTTCCTTCAATGGGTGTA +
Preference number: 4 (lower is better)
Translates to: SHQPTMTFSNPVLVLNLRAASPA*FPSMGV
Trigger: TACACCCATTGAAGGAAACCAGGCGGGTGATGCAGC...CCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTCTGCAGGGGATTCATTaGTCTCAGATGGGCCAAATG +
Preference number: 4 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLALQGIH*SQMGQM
Trigger: CATTTGGCCCATCTGAGACCAATGAATCCCCTGCAG...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGTGGTGCTGGAAGCCCTaGCAATTCCTGCGACAACTG +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLWCWKP*QFLRQL
Trigger: CAGTTGTCGCAGGAATTGCCAGGGCTTCCAGCACCA...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACTGTGCCATCACAGGTaGCTCTGGTACCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: KMLTSTYNDLFQSSSCVELCHHR*LWYLLW
Trigger: CCACAGGAGGTACCAGAGCCACCTGTGATGGCACAG...TTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATCAACGGTGGCATTGTTaGGGGCTCTTCAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYQRWHC*GLFRRQ
Trigger: TTGCCTCCTGAAGAGCCCCCAACAATGCCACCGTTG...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGCTCAGGAGGCAATGGTaGTGTCATTGGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLLRRQW*CHWWLL
Trigger: GAGGAGCCACCAATGACACCACCATTGCCTCCTGAG...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCATGGAGTAGTTACTGCTaGAACCAACAAGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPWSSYC*NQQGCR
Trigger: TCTACATCCTTGTTGGTTCCAGCAGTAACTACTCCA...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATGCTCTCTGCCAGCACTaGAGTAGTTACTGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNALCQH*SSYCWN
Trigger: GTTCCAGCAGTAACTACTCCAGTGCTGGCAGAGAGC...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp GTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACCCGATAAATTTAGATTCCAGTATCATTaGTGTGGACTCTATAGCCAC +
Preference number: 4 (lower is better)
Translates to: VLNLRICPLRSIPPPDKFRFQYH*CGLYSH
Trigger: GTGGCTATAGAGTCCACACCAATGATACTGGAATCT...AAATTTATCGGGTGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATTACTTACAACCGGGCTaGCAGCAGATCTGTCACGTC +
Preference number: 4 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNYLQPG*QQICHV
Trigger: GACGTGACAGATCTGCTGCCAGCCCGGTTGTAAGTA...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCTACTTACAACCGGGCTaGCAGCAGATCTGTCACGTC +
Preference number: 4 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVYLQPG*QQICHV
Trigger: GACGTGACAGATCTGCTGCCAGCCCGGTTGTAAGTA...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCCTCCAGCGCCACAGCTaGAGGTTCAGAATCAAACTT +
Preference number: 4 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVLQRHS*RFRIKL
Trigger: AAGTTTGATTCTGAACCTTCAGCTGTGGCGCTGGAG...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp CTTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCAGTTGTCACCACAGACTaGACAGAGATCTCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LAVFMCTIFSSTLFNQAAVVTTD*TEISSA
Trigger: GGCGCTGGAGATCTCTGTTCAGTCTGTGGTGACAAC...TGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp GCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTATCAGTAGGCACTGCTaGAGGCTCCGAAATCTCACT +
Preference number: 4 (lower is better)
Translates to: AMYPRCSHQPTMTFSNPVISRHC*RLRNLT
Trigger: AGTGAGATTTCGGAGCCTTCAGCAGTGCCTACTGAT...AACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGAGAAGGTTGAAGGACTaGCACCGCTGGTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLRRLKD*HRWFQN
Trigger: GTTCTGGAACCAGCGGTGTCAGTCCTTCAACCTTCT...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCAAATTAAAGGCTATCTaGCAAACAACCCAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSKLKAI*QTTQRN
Trigger: GTTTCTCTGGGTTGTTTGTCAGATAGCCTTTAATTT...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACAACCCCATGGATGGTaGTGGAAGCCCTGGCAATTC +
Preference number: 4 (lower is better)
Translates to: KMLTSTYNDLFQSSSCVEQPHGW*WKPWQF
Trigger: GAATTGCCAGGGCTTCCAGCACCATCCATGGGGTTG...TTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATCTCTGGCAACTCTACTaGTGCTGTCACCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYLWQLY*CCHQRQ
Trigger: CTGCCTTTGGTGACAGCAGCAGTAGAGTTGCCAGAG...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATTTTAATGGGGTTCCCCAGCAACCCTGTTaGCGTTGTCACCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: CALYLAAHYLIRRHFNGVPQQPC*RCHLRM
Trigger: CATCCTGAGGTGACAACGGCAACAGGGTTGCTGGGG...AACCCCATTAAAATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACCCTGTTGCCAGAGGCTaGCCCAAAAGCTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYPVARG*PKSSSA
Trigger: AGCACTGGAGCTTTTGGGGCAGCCTCTGGCAACAGG...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATACAGGAGGCTCAGGCTaGGATACAGACTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHTGGSG*DTDSSD
Trigger: ATCTGAAGAGTCTGTATCGCAGCCTGAGCCTCCTGT...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCTAGACTTGGATCTGTaGTTTGGAGATCTTTTGCGC +
Preference number: 4 (lower is better)
Translates to: LFQSSSCVEPEDLPSPINLDLDL*FGDLLR
Trigger: GCGCAAAAGATCTCCAAAGCACAGATCCAAGTCTAG...ATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCGTTTCACCATTCAGCTaGCCTTCATTCCTTCCACTG +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGVSPFS*PSFLPL
Trigger: CAGTGGAAGGAATGAAGGCCAGCTGAATGGTGAAAC...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTGCATCACCCGCCTaGTTTCCTTCAATGGGTGTA +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLAASPA*FPSMGV
Trigger: TACACCCATTGAAGGAAACCAGGCGGGTGATGCAGC...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATCCTGCGGTCTTGTCATaGATGAATCTGCAATCTCCG +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHPAVLS*MNLQSP
Trigger: CGGAGATTGCAGATTCATCCATGACAAGACCGCAGG...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACCTGTGCCATCACAGGTaGCTCTGGTACCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYLCHHR*LWYLLW
Trigger: CCACAGGAGGTACCAGAGCCACCTGTGATGGCACAG...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCTATTCTATAGGACCTaGGTGCTATCCTGTAGGGTC +
Preference number: 4 (lower is better)
Translates to: QPTMTFSNPVLVLNLRICLFYRT*VLSCRV
Trigger: GACCCTACAGGATAGCACCCAGGTCCTATAGAATAG...GCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATAGATCGATCAGCCATTaGGGACATCATGGAGCGTTC +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHRSISH*GHHGAF
Trigger: GAACGCTCCATGATGTCCCCAATGGCTGATCGATCT...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CTTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCACAACGGTGGCATTGTTaGGGGCTCTTCAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LAVFMCTIFSSTLFNQAAQRWHC*GLFRRQ
Trigger: TTGCCTCCTGAAGAGCCCCCAACAATGCCACCGTTG...TGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACCTCAGGTGGCAACGGTaGCATTGTTGGGGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYLRWQR*HCWGLF
Trigger: GAAGAGCCCCCAACAATGCCACCGTTGCCACCTGAG...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAAATGCTGACTGCTCAGTaGGCAATGCTGGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: KMLTSTYNDLFQSSSCVEMLTAQ*AMLDPL
Trigger: CAGAGGGTCCAGCATTGCCCACTGAGCAGTCAGCAT...TTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp ACCCAGAGAAACAGTAAGAAACCATCATTAAGGGCAATGGGCTATGTACCCAAGAATGGTAACATAGTCTaGCTCAGCCACAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: TQRNSKKPSLRAMGYVPKNGNIV*LSHNRR
Trigger: CCTCCTGTTGTGGCTGAGCCAGACTATGTTACCATT...CTTGGGTACATAGCCCATTGCCCTTAATGATGGTTTCTTACTGTTTCTCTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTAATCTGTCAGACGTTTaGGTGATCTGCCTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: LRAMGYVPKMLTSTYNDLNLSDV*VICLVQ
Trigger: CTGAACGAGGCAGATCACCCAAACGTCTGACAGATT...AAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTAATCTGTCAGACGTTTaGGTGATCTGCCTCGTTCAG +
Preference number: 4 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLANLSDV*VICLVQ
Trigger: CTGAACGAGGCAGATCACCCAAACGTCTGACAGATT...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATGGCCATTATCGCCAATaGCTGGTACCAAACAGCCAA +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHGHYRQ*LVPNSQ
Trigger: TTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCC...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp TTTTGTCATGAAATTAGTGGTTCTCAAATTGAGCCTGTGGATCACCAGAGGCCAACAACCAAAAGGTCCTaGGGCTACAGGTCACAAGAG +
Preference number: 4 (lower is better)
Translates to: FCHEISGSQIEPVDHQRPTTKRS*GYRSQE
Trigger: CTCTTGTGACCTGTAGCCCCAGGACCTTTTGGTTGT...TGGCCTCTGGTGATCCACAGGCTCAATTTGAGAACCACTAATTTCATGACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429093.6
CDS-3UTR TCA 90 bp CAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCTGGAAAGCTCCTGTTaGATTTCCCGGAATTTACTG +
Preference number: 4 (lower is better)
Translates to: QPTMTFSNPVLVLNLRICLESSC*ISRNLL
Trigger: CAGTAAATTCCGGGAAATTCAACAGGAGCTTTCCAG...GCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCTACAACTGGCTCAGATaGCTTCAACACCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGYNWLR*LQHQCC
Trigger: ACAACACTGGTGTTGAAGTCATCTGAGCCAGTTGTA...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp TTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTACCAACATGATCTTTaGTGGCTCTGGAGATGTGCT +
Preference number: 4 (lower is better)
Translates to: LRAMGYVPKMLTSTYNDLYQHDL*WLWRCA
Trigger: AGCACATCTCCAGAGCCATCAAAGATCATGTTGGTA...AAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATAGAGCGTTCGTAAGATaGCATCATGGAACGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHRAFVR*HHGTFC
Trigger: GCAGAACGTTCCATGATGTCATCTTACGAACGCTCT...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp TACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGACAATCATAGAAGGTTaGAGGACTGACACCGCTGGT +
Preference number: 4 (lower is better)
Translates to: YPRCSHQPTMTFSNPVLVTIIEG*RTDTAG
Trigger: ACCAGCGGTGTCAGTCCTTCAACCTTCTATGATTGT...CACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATACAATCATAGAAGGTTaGAGGACTGACACCGCTGGT +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHTIIEG*RTDTAG
Trigger: ACCAGCGGTGTCAGTCCTTCAACCTTCTATGATTGT...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTCAGTTGGTATTACTTaGGTCTGCTCTGAGACTGTG +
Preference number: 4 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLASVGIT*VCSETV
Trigger: CACAGTCTCAGAGCAGACTCAAGTAATACCAACTGA...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AAACCATCATTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACATGTGGTTCTTCACCTaGATGCAATGCAATCTCCTG +
Preference number: 4 (lower is better)
Translates to: KPSLRAMGYVPKMLTSTYMWFFT*MQCNLL
Trigger: CAGGAGATTGCATTGCATTCAGGTGAAGAACCACAT...GTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAATGATGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp ACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCATTGGCAGAAAATCCTaGATCAGGCAGTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: TYNDLFQSSSCVEPEDLPIGRKS*IRQCLF
Trigger: AAAGAGACACTGCCTGATTCAGGATTTTCTGCCAAT...GGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGGTGGTGGTAAAAAGGTaGGAAGAAACTTGGGACAAG +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKVVVKR*EETWDK
Trigger: CTTGTCCCAAGTTTCTTCTCACCTTTTTACCACCAC...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATTACTGCCACAGACTaGTCTGACTGCTCTGAGATT +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKITATD*SDCSEI
Trigger: AATCTCAGAGCAGTCAGAGCAGTCTGTGGCAGTAAT...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATCCATTGTTGTTGATGTaGTTGGCTCAGGGTACACCT +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHPLLLM*LAQGTP
Trigger: AGGTGTACCCTGAGCCAAGCACATCAACAACAATGG...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTAGTAGGCAGCTCCTGTaGTACCGTATTATAGGATTC +
Preference number: 4 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLASRQLL*YRIIGF
Trigger: GAATCCTATAATACGGTAGCACAGGAGCTGCCTACT...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTGTTAATGCTGACTaGTCAGTGGGCAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLAVNAD*SVGNAG
Trigger: TCCAGCATTGCCCACTGAGCAGTCAGCATTAACAGC...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp ACCCAGAGAAACAGTAAGAAACCATCATTAAGGGCAATGGGCTATGTACCCAAGCACTGGAGTAGTTACTaGTGGAACCAACAAGGATGT +
Preference number: 4 (lower is better)
Translates to: TQRNSKKPSLRAMGYVPKHWSSY*WNQQGC
Trigger: ACATCCTTGTTGGTTCCAGCAGTAACTACTCCAGTG...CTTGGGTACATAGCCCATTGCCCTTAATGATGGTTTCTTACTGTTTCTCTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATTGCAATGCAATCTCCTaGATGCCAATCTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHCNAIS*MPISGA
Trigger: TGCTCCAGAGATTGGCATGCAGGAGATTGCATTGCA...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATTTTAATGGGGTTTGCTGCTTCTCCTCCTaGGTCTTGAACGTGACCGTG +
Preference number: 4 (lower is better)
Translates to: CALYLAAHYLIRRHFNGVCCFSS*VLNVTV
Trigger: CACGGTCACGTTCAAGACGCAGGAGGAGAAGCAGCA...AACCCCATTAAAATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp TACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGACTTTGATCTTGATCTaGTGCTTCTCCTCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: YPRCSHQPTMTFSNPVLVTLILI*CFSSCV
Trigger: GACGCAGGAGGAGAAGCAGCAGATCAAGATCAAAGT...CACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATACTTTGATCTTGATCTaGTGCTTCTCCTCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHTLILI*CFSSCV
Trigger: GACGCAGGAGGAGAAGCAGCAGATCAAGATCAAAGT...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TTTTGTCATGAAATTAGTGGTTCTCAAATTGAGCCTGTGGATCACCAGAGGCCATCCCAGTTTCAGCACTaGTATGCTGCCAGTACTCAT +
Preference number: 4 (lower is better)
Translates to: FCHEISGSQIEPVDHQRPSQFQH*YAASTH
Trigger: ATGAGTACTGGCAGCATAGCAGTGCTGAAACTGGGA...TGGCCTCTGGTGATCCACAGGCTCAATTTGAGAACCACTAATTTCATGACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429093.6
CDS-3UTR CCA 90 bp TTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATAAATCTGCTCGATGTTaGTCGCCATGGCGTCCGCTC +
Preference number: 4 (lower is better)
Translates to: LLFSCALYLAAHYLIRRHKSARC*SPWRPL
Trigger: GAGCGGACGCCATGGCGACCAACATCGAGCAGATTT...ATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATTTCAGGAGGCAAAGGTaGCACCATATATGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHFRRQR*HHICLC
Trigger: ACAGAGGCATATATGGTGCCACCTTTGCCTCCTGAA...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATAGATTCTGGCTCTGGTaGTGGTTCTGGAACAGTCAC +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYRFWLW*WFWNSH
Trigger: GTGACTGTTCCAGAACCACCACCAGAGCCAGAATCT...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATAATGGTAACATAGTCTaGCTCAGCCACAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHNGNIV*LSHNRR
Trigger: CCTCCTGTTGTGGCTGAGCCAGACTATGTTACCATT...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCAGAGCTGCTAATGTCTaGTCACTCTCTTTTACAGGT +
Preference number: 4 (lower is better)
Translates to: TYNDLFQSSSCVEPEDLPRAANV*SLSFTG
Trigger: ACCTGTAAAAGAGAGTGACCAGACATTAGCAGCTCT...GGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTATGAGATTTCGTCTTTaGCTCAGATTCTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLAMRFRL*LRFFWL
Trigger: CAGCCAGAAGAATCTGAGTCAAAGACGAAATCTCAT...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCAGCACAGACTTCATCTaGTACTCCACTGACATTGTT +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGSTDFI*YSTDIV
Trigger: AACAATGTCAGTGGAGTATCAGATGAAGTCTGTGCT...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATTACCAACATGATCTTTaGTGGCTCTGGAGATGTGCT +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHYQHDL*WLWRCA
Trigger: AGCACATCTCCAGAGCCATCAAAGATCATGTTGGTA...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AAACCATCATTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACCGCTTCAATTGCAGATaGCTCTGGAAAATCCATTGT +
Preference number: 4 (lower is better)
Translates to: KPSLRAMGYVPKMLTSTYRFNCR*LWKIHC
Trigger: ACAATGGATTTTCCAGAGTCATCTGCAATTGAAGCG...GTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAATGATGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGCGCTTCAATTGCAGATaGCTCTGGAAAATCCATTGT +
Preference number: 4 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKRFNCR*LWKIHC
Trigger: ACAATGGATTTTCCAGAGTCATCTGCAATTGAAGCG...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACGGTCTTGTCATGGATaGATCTGCAATCTCCGATGG +
Preference number: 4 (lower is better)
Translates to: KMLTSTYNDLFQSSSCVERSCHG*ICNLRW
Trigger: CCATCGGAGATTGCAGATTCATCCATGACAAGACCG...TTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp CAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCATCAGCAGTATAAGATaGCATCATAGATCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QPTMTFSNPVLVLNLRICISSIR*HHRSVS
Trigger: GCTGACCGATCTATGATGTCATCTTATACTGCTGAT...GCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACCACAGTTGGTTCAGCTaGCATGGCGGGAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYHSWFS*HGGSFR
Trigger: TCTGAAACTCCCGCCATGTCAGCTGAACCAACTGTG...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCAAGTCAATTCCTTCCTaGGATGCAAAGGAACAGACT +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGKSIPS*DAKEQT
Trigger: AGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTT...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTAAAGACCTAAAAATCTaGTCGATGTTGGTCGCCATG +
Preference number: 4 (lower is better)
Translates to: LRAMGYVPKMLTSTYNDLKDLKI*SMLVAM
Trigger: CATGGCGACCAACATCGAGCAGATTTTTAGGTCTTT...AAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATATGGCTCTGGAGATGTaGTCTCCACAGATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYMALEM*SPQISA
Trigger: TGCTGAAATCTGTGGAGAGCACATCTCCAGAGCCAT...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAATTCGGTCAACTCCATTaGTACTGTTACCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KMLTSTYNDLFQSSSCVEFGQLH*YCYRRL
Trigger: CAGCCTGCGGTAACAGTAGCAATGGAGTTGACCGAA...TTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATAGTAGGCAGCTCCTGTaGTACCGTATTATAGGATTC +
Preference number: 4 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNSRQLL*YRIIGF
Trigger: GAATCCTATAATACGGTAGCACAGGAGCTGCCTACT...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CTTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATCTATAGGACCTGGGTaGTATCCTGTAGGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: LAVFMCTIFSSTLFNQAASIGPG*YPVGSR
Trigger: CCTAGACCCTACAGGATAGCACCCAGGTCCTATAGA...TGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTCATCATGGAACGTTCTaGAGCATAGGACATCATCAT +
Preference number: 4 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLAHHGTF*SIGHHH
Trigger: ATGATGATGTCCTATGCTGCAGAACGTTCCATGATG...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCAGGTGGCACCATATATaGCTCTGTATATGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGRWHHI*LCICVS
Trigger: ACTGACACATATACAGAGGCATATATGGTGCCACCT...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCGGTTCTTCACCTGAATaGAATGCAATCTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVGSSPE*NAISCM
Trigger: CATGCAGGAGATTGCATTGCATTCAGGTGAAGAACC...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATCTAGACTTGGATCTGTaGTTTGGAGATCTTTTGCGC +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHLDLDL*FGDLLR
Trigger: GCGCAAAAGATCTCCAAAGCACAGATCCAAGTCTAG...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATTGTCAAATGAGAAGCTaGGGGTTGTTTCATCTGTCG +
Preference number: 4 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNCQMRS*GLFHLS
Trigger: CGACAGATGAAACAACCCGCAGCTTCTCATTTGACA...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CTTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCACTGCAGGGGATTCATTaGTCTCAGATGGGCCAAATG +
Preference number: 4 (lower is better)
Translates to: LAVFMCTIFSSTLFNQAALQGIH*SQMGQM
Trigger: CATTTGGCCCATCTGAGACCAATGAATCCCCTGCAG...TGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGTGTCATGGATGGTTCTaGCATTACTGCCACAGACTG +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLCHGWF*HYCHRL
Trigger: CAGTCTGTGGCAGTAATGCCAGAACCATCCATGACA...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCCCAGAATCTTTGTCATaGATGGTTCTGGCATTACTG +
Preference number: 4 (lower is better)
Translates to: MGYVPKMLTSTYNDLFQSPESLS*MVLALL
Trigger: CAGTAATGCCAGAACCATCCATGACAAAGATTCTGG...GGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGCTAACCTATATGGCCTaGGTGCTATTCTATAGGACC +
Preference number: 4 (lower is better)
Translates to: YPRCSHQPTMTFSNPVLVLTYMA*VLFYRT
Trigger: GGTCCTATAGAATAGCACCCAGGCCATATAGGTTAG...CACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTAGTCACTGGTCTCTCTaGAACAACTTCATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LRAMGYVPKMLTSTYNDLSHWSL*NNFMFF
Trigger: GAAGAACATGAAGTTGTTCCAGAGAGACCAGTGACT...AAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AAACCATCATTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACTACCATACAAGTCACTaGTCTCTCTGGAACAACTTC +
Preference number: 4 (lower is better)
Translates to: KPSLRAMGYVPKMLTSTYYHTSH*SLWNNF
Trigger: GAAGTTGTTCCAGAGAGACCAGTGACTTGTATGGTA...GTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAATGATGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGCAGCGCAGAAACAACTaGCACAGGAATGGTAACATA +
Preference number: 4 (lower is better)
Translates to: SHQPTMTFSNPVLVLNLRQRRNN*HRNGNI
Trigger: TATGTTACCATTCCTGTGCCAGTTGTTTCTGCGCTG...CCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCAGATTCCAGTATCATTaGTGTGGACTCTATAGCCAC +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGRFQYH*CGLYSH
Trigger: GTGGCTATAGAGTCCACACCAATGATACTGGAATCT...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATCTGCATGCCAATCTCTaGAGCAAGATTTTGATCACC +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHLHANL*SKILIT
Trigger: GGTGATCAAAATCTTGCTCCAGAGATTGGCATGCAG...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGCTGGAAAGCTCCTGTTaGATTTCCCGGAATTTACTG +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLLESSC*ISRNLL
Trigger: CAGTAAATTCCGGGAAATTCAACAGGAGCTTTCCAG...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp TCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATGAGATTTCGTCTTTaGCTCAGATTCTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SHQPTMTFSNPVLVLNLRMRFRL*LRFFWL
Trigger: CAGCCAGAAGAATCTGAGTCAAAGACGAAATCTCAT...CCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp TTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTATGTTCCCATCATCATaGGATTTCGTCTTTGACTCA +
Preference number: 4 (lower is better)
Translates to: LRAMGYVPKMLTSTYNDLMFPSS*DFVFDS
Trigger: TGAGTCAAAGACGAAATCTCATGATGATGGGAACAT...AAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp CTTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCAAGAGCGTTCGTAAGATaGCATCATGGAACGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LAVFMCTIFSSTLFNQAARAFVR*HHGTFC
Trigger: GCAGAACGTTCCATGATGTCATCTTACGAACGCTCT...TGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AAACCATCATTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAGCCATAGACATCATTaGACGATCAGCAGTATAAGA +
Preference number: 4 (lower is better)
Translates to: KPSLRAMGYVPKMLTSTYSHRHH*TISSIR
Trigger: TCTTATACTGCTGATCGTTCAATGATGTCTATGGCT...GTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAATGATGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp CAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCTCTGGAGCAAGATTTTaGTCACCAGAGGATAGATTA +
Preference number: 4 (lower is better)
Translates to: QPTMTFSNPVLVLNLRICSGARF*SPEDRL
Trigger: TAATCTATCCTCTGGTGATCAAAATCTTGCTCCAGA...GCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATATGTGGTTCTTCACCTaGATGCAATGCAATCTCCTG +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYMWFFT*MQCNLL
Trigger: CAGGAGATTGCATTGCATTCAGGTGAAGAACCACAT...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATAGACTTGGACTTAGATaGTCTCTTTCTTGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHRLGLR*SLSCPR
Trigger: TCTAGGGCAAGAAAGAGATCATCTAAGTCCAAGTCT...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp TGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATTTTAATGGGGTTTGTCAGACGTTTGGGTaGTCTGCCTCGTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: CALYLAAHYLIRRHFNGVCQTFG*SASFRR
Trigger: TCTTCTGAACGAGGCAGATCACCCAAACGTCTGACA...AACCCCATTAAAATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATACAGACTGCTCTGACTaGTCTGAGATTACTGATGTA +
Preference number: 4 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNTDCSD*SEITDV
Trigger: TACATCAGTAATCTCAGAGCAGTCAGAGCAGTCTGT...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAAAGTAGGCACTGGTGCTaGTGCAAAGGAATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: KMLTSTYNDLFQSSSCVESRHWC*CKGIQN
Trigger: ATTCTGGATTCCTTTGCAGCAGCACCAGTGCCTACT...TTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATAGGTGGCACCATATATaGCTCTGTATATGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNRWHHI*LCICVS
Trigger: ACTGACACATATACAGAGGCATATATGGTGCCACCT...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACCTCCAGAATGCTCTCTaGCAGCACTGGAGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYLQNAL*QHWSSY
Trigger: GTAACTACTCCAGTGCTGGCAGAGAGCATTCTGGAG...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAATGCAATGCAATCTCCTaGATGCCAATCTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: KMLTSTYNDLFQSSSCVECNAIS*MPISGA
Trigger: TGCTCCAGAGATTGGCATGCAGGAGATTGCATTGCA...TTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATATTCACTGGTACGCTTaGGTGATTTGTGTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHIHWYA*VICVQK
Trigger: CTTCTGAACACAAATCACGCAAGCGTACCAGTGAAT...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATGCTATGTACCCAAGATaGTCACATCAACCTACAATG +
Preference number: 4 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNAMYPR*SHQPTM
Trigger: CATTGTAGGTTGATGTGAGCATCTTGGGTACATAGC...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGTGTCTTTGCGTATATaGAGTATACTCGTGGCGATC +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLVSLRI*SILVAI
Trigger: GATCGCCACGAGTATACTGCATATACGCAAAGACAC...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCAAATATATATGTTACTaGCAAAACCCGAACCGCAGG +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGKYICY*QNPNRR
Trigger: CCTGCGGTTCGGGTTTTGGCAGTAACATATATATTT...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCAATTCCTTCCTGAGATaGAAAGGAACAGACTCCATT +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGNSFLR*KGTDSI
Trigger: AATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATT...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGTTCATTGGTCTCAGATaGGCCAAATGCTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLFIGLR*AKCSCR
Trigger: CCTACAAGAGCATTTGGCCCATCTGAGACCAATGAA...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CTTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATGTCATGGATGGTTCTaGCATTACTGCCACAGACTG +
Preference number: 4 (lower is better)
Translates to: LAVFMCTIFSSTLFNQAACHGWF*HYCHRL
Trigger: CAGTCTGTGGCAGTAATGCCAGAACCATCCATGACA...TGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATAATCTTTGTCATGGATaGTTCTGGCATTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNNLCHG*FWHYCH
Trigger: GTGGCAGTAATGCCAGAACCATCCATGACAAAGATT...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACATCTGCAATCTCCGATaGTACGTCTACAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYICNLR*YVYRLL
Trigger: GAGCAGCCTGTAGACGTACCATCGGAGATTGCAGAT...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp TTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATAGATTCTGGCTCTGGTaGTGGTTCTGGAACAGTCAC +
Preference number: 4 (lower is better)
Translates to: LLFSCALYLAAHYLIRRHRFWLW*WFWNSH
Trigger: GTGACTGTTCCAGAACCACCACCAGAGCCAGAATCT...ATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp CTTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATTGGTTCAGCTGACATaGCGGGAGTTTCAGATACCA +
Preference number: 4 (lower is better)
Translates to: LAVFMCTIFSSTLFNQAALVQLT*REFQIP
Trigger: TGGTATCTGAAACTCCCGCCATGTCAGCTGAACCAA...TGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCTGGAGTAGTTACTGCTaGAACCAACAAGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVWSSYC*NQQGCR
Trigger: TCTACATCCTTGTTGGTTCCAGCAGTAACTACTCCA...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGCAGCGCAGAAACAACTaGCACAGGAATGGTAACATA +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLQRRNN*HRNGNI
Trigger: TATGTTACCATTCCTGTGCCAGTTGTTTCTGCGCTG...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp TACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTATAGCCACCTCAGTTaGTATTACTTGAGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: YPRCSHQPTMTFSNPVLVYSHLS*YYLSLL
Trigger: GAGCAGACTCAAGTAATACCAACTGAGGTGGCTATA...CACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACTATGCAGTATACTCGTaGCGATCAGTGAACGCGTCG +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYYAVYS*RSVNAS
Trigger: CGACGCGTTCACTGATCGCCACGAGTATACTGCATA...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGATTATCGCCAATGGCTaGTACCAAACAGCCAAAACC +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLIIANG*YQTAKT
Trigger: GGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAAT...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp CTTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCAGGGATCAGGAGATTTTaGACCCAACATAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: LAVFMCTIFSSTLFNQAAGIRRF*TQHSRI
Trigger: GATTCTGCTATGTTGGGTTCAAAATCTCCTGATCCC...TGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGATTGGCAGAAAATCCTaGATCAGGCAGTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLIGRKS*IRQCLF
Trigger: AAAGAGACACTGCCTGATTCAGGATTTTCTGCCAAT...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp ACCCAGAGAAACAGTAAGAAACCATCATTAAGGGCAATGGGCTATGTACCCAAGGCTATTTCAAGTAATTaGGCCTTATCCAAATCTGTC +
Preference number: 4 (lower is better)
Translates to: TQRNSKKPSLRAMGYVPKAISSN*ALSKSV
Trigger: GACAGATTTGGATAAGGCTCAATTACTTGAAATAGC...CTTGGGTACATAGCCCATTGCCCTTAATGATGGTTTCTTACTGTTTCTCTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCGCTATTTCAAGTAATTaGGCCTTATCCAAATCTGTC +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGAISSN*ALSKSV
Trigger: GACAGATTTGGATAAGGCTCAATTACTTGAAATAGC...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTGCAATTGATGAGGTCTaGTACATAAAGCAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLAAIDEV*YIKQSQ
Trigger: TTGACTTTGCTTTATGTATCAGACCTCATCAATTGC...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACAGGCACTGGTGCTGCTaGAAAGGAATCCAGAATCTT +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYRHWCC*KGIQNL
Trigger: AAGATTCTGGATTCCTTTGCAGCAGCACCAGTGCCT...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACAGTAGGCACTGGTGCTaGTGCAAAGGAATCCAGAAT +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYSRHWC*CKGIQN
Trigger: ATTCTGGATTCCTTTGCAGCAGCACCAGTGCCTACT...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp GCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTAACTTCATGTTCTTCTaGTACTACTGCAGACTCTAC +
Preference number: 4 (lower is better)
Translates to: AMYPRCSHQPTMTFSNPVNFMFF*YYCRLY
Trigger: GTAGAGTCTGCAGTAGTAGCAGAAGAACATGAAGTT...AACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATCTTACTAGTTCCTGTTaGATCAGGTTCCAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYLTSSC*IRFQSK
Trigger: TTTGCTCTGGAACCTGATGCAACAGGAACTAGTAAG...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp GCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTGCTTTGGAGATCTTTTaGGCTTCTCTTTTGATACAG +
Preference number: 4 (lower is better)
Translates to: AMYPRCSHQPTMTFSNPVALEIF*ASLLIQ
Trigger: CTGTATCAAAAGAGAAGCGCAAAAGATCTCCAAAGC...AACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp CAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCTGGAGTTGGTTTTGCTaGAGCAATATTCAGATTGAA +
Preference number: 4 (lower is better)
Translates to: QPTMTFSNPVLVLNLRICWSWFC*SNIQIE
Trigger: TTCAATCTGAATATTGCTGCAGCAAAACCAACTCCA...GCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp GCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTCATTCCTTCCACTaGAAAGCTCCTGTTGAATTT +
Preference number: 4 (lower is better)
Translates to: AMYPRCSHQPTMTFSNPVLHSFH*KAPVEF
Trigger: AAATTCAACAGGAGCTTTCCAGTGGAAGGAATGAAG...AACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGCCTGGTTTCCTTCAATaGGTGTATTTGTTTCACCAT +
Preference number: 4 (lower is better)
Translates to: SHQPTMTFSNPVLVLNLRPGFLQ*VYLFHH
Trigger: ATGGTGAAACAAATACACCCATTGAAGGAAACCAGG...CCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATAATCTTTGTCATGGATaGTTCTGGCATTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYNLCHG*FWHYCH
Trigger: GTGGCAGTAATGCCAGAACCATCCATGACAAAGATT...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp TCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGTTAGAAGCTAATATATaGGATTCTGGGGCCATCAAG +
Preference number: 4 (lower is better)
Translates to: SHQPTMTFSNPVLVLNLRLEANI*DSGAIK
Trigger: CTTGATGGCCCCAGAATCCCATATATTAGCTTCTAA...CCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATTTAGAAGCTAATATATaGGATTCTGGGGCCATCAAG +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHLEANI*DSGAIK
Trigger: CTTGATGGCCCCAGAATCCCATATATTAGCTTCTAA...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCTTGGATGCTAATATATaGGTCTCCATGGTGTTAGAA +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGLDANI*VSMVLE
Trigger: TTCTAACACCATGGAGACCCATATATTAGCATCCAA...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATAACATAGCAGAATCTTaGGTACTAGACGCTAACATC +
Preference number: 4 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNNIAES*VLDANI
Trigger: GATGTTAGCGTCTAGTACCCAAGATTCTGCTATGTT...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACCTATTCTATAGGACCTaGGTGCTATCCTGTAGGGTC +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYLFYRT*VLSCRV
Trigger: GACCCTACAGGATAGCACCCAGGTCCTATAGAATAG...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATTATAGCCACCTCAGTTaGTATTACTTGAGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYYSHLS*YYLSLL
Trigger: GAGCAGACTCAAGTAATACCAACTGAGGTGGCTATA...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGAGAGCTGCTAATGTCTaGTCACTCTCTTTTACAGGT +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLRAANV*SLSFTG
Trigger: ACCTGTAAAAGAGAGTGACCAGACATTAGCAGCTCT...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATTGTGTTCAGAAGATTTaGAACGCTTACTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNCVQKI*NAYFEI
Trigger: GATCTCGAAGTAAGCGTTCCAAATCTTCTGAACACA...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATAGCCATAGACATCATTaGACGATCAGCAGTATAAGA +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYSHRHH*TISSIR
Trigger: TCTTATACTGCTGATCGTTCAATGATGTCTATGGCT...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGTCTGGAGCAAGATTTTaGTCACCAGAGGATAGATTA +
Preference number: 4 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLSGARF*SPEDRL
Trigger: TAATCTATCCTCTGGTGATCAAAATCTTGCTCCAGA...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAAAGACTTGGACTTAGATaGTCTCTTTCTTGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: KMLTSTYNDLFQSSSCVERLGLR*SLSCPR
Trigger: TCTAGGGCAAGAAAGAGATCATCTAAGTCCAAGTCT...TTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp CTTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCACACATCAACCTACAATaGCCTTTTCCAATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LAVFMCTIFSSTLFNQAAHINLQ*PFPIQF
Trigger: GAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTG...TGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATCAAAACCCGAAATGTTaGTGCGAAAGAAGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYQNPKC*CERSSF
Trigger: AAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTG...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCTCAAGGAATATTCCTTaGAGAGTTCTAAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVSRNIP*RVLSQI
Trigger: AATCTGGCTTAGAACTCTTCAAGGAATATTCCTTGA...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp ATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCACTTCCTCTATCTTCTaGACTATTTCTTCATTTGGT +
Preference number: 4 (lower is better)
Translates to: MGYVPKMLTSTYNDLFQSTSSIF*TISSFG
Trigger: ACCAAATGAAGAAATAGTGCAGAAGATAGAGGAAGT...GGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCACTTCCTCTATCTTCTaGACTATTTCTTCATTTGGT +
Preference number: 4 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGTSSIF*TISSFG
Trigger: ACCAAATGAAGAAATAGTGCAGAAGATAGAGGAAGT...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATTTTAATGGGGTTATTACTGCCACAGACTaGTCTGACTGCTCTGAGATT +
Preference number: 4 (lower is better)
Translates to: CALYLAAHYLIRRHFNGVITATD*SDCSEI
Trigger: AATCTCAGAGCAGTCAGAGCAGTCTGTGGCAGTAAT...AACCCCATTAAAATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACCACTGGAGTAGTTACTaGTGGAACCAACAAGGATGT +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYHWSSY*WNQQGC
Trigger: ACATCCTTGTTGGTTCCAGCAGTAACTACTCCAGTG...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATGGTTCTTCACCTGAATaGAATGCAATCTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: LLFSCALYLAAHYLIRRHGSSPE*NAISCM
Trigger: CATGCAGGAGATTGCATTGCATTCAGGTGAAGAACC...ATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGGATGCTAATATATaGGTCTCCATGGTGTTAGAA +
Preference number: 4 (lower is better)
Translates to: YPRCSHQPTMTFSNPVLVLDANI*VSMVLE
Trigger: TTCTAACACCATGGAGACCCATATATTAGCATCCAA...CACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATAACATAGCAGAATCTTaGGTACTAGACGCTAACATC +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYNIAES*VLDANI
Trigger: GATGTTAGCGTCTAGTACCCAAGATTCTGCTATGTT...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp TTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATCTGCATGCCAATCTCTaGAGCAAGATTTTGATCACC +
Preference number: 4 (lower is better)
Translates to: LLFSCALYLAAHYLIRRHLHANL*SKILIT
Trigger: GGTGATCAAAATCTTGCTCCAGAGATTGGCATGCAG...ATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATTGTGTTCAGAAGATTTaGAACGCTTACTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYCVQKI*NAYFEI
Trigger: GATCTCGAAGTAAGCGTTCCAAATCTTCTGAACACA...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATACAACTATAGCCCCGTaGAAATTTCAACGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNTTIAP*KFQRLN
Trigger: ATTCAAACGTTGAAATTTCCACGGGGCTATAGTTGT...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATGTTCCTTTCAGGCAATaGCCAGCTATTCTTATTAAT +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHVPFRQ*PAILIN
Trigger: ATTAATAAGAATAGCTGGCCATTGCCTGAAAGGAAC...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCACAGACTCCATTACCTaGCTTTATAAAAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVTDSIT*LYKKVK
Trigger: CTTGACCTTTTTATAAAGCCAGGTAATGGAGTCTGT...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATAGAAACAGATGGTTCTaGAACAATCATAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYRNRWF*NNHRRL
Trigger: CAACCTTCTATGATTGTTTCAGAACCATCTGTTTCT...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR TCA 90 bp AAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAAGGAAATTTCAACGTTTaGATTCCACTTCTCCGACTT +
Preference number: 4 (lower is better)
Translates to: KMLTSTYNDLFQSSSCVEGNFNV*IPLLRL
Trigger: AAGTCGGAGAAGTGGAATTCAAACGTTGAAATTTCC...TTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp TTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATCATCATGGAACGTTCTaGAGCATAGGACATCATCAT +
Preference number: 4 (lower is better)
Translates to: LLFSCALYLAAHYLIRRHHHGTF*SIGHHH
Trigger: ATGATGATGTCCTATGCTGCAGAACGTTCCATGATG...ATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR GCA 90 bp GCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTTTCCACAAAGTGAATTaGATCGAGTTACTGTCAAAT +
Preference number: 4 (lower is better)
Translates to: AMYPRCSHQPTMTFSNPVFHKVN*IELLSN
Trigger: ATTTGACAGTAACTCGATGCAATTCACTTTGTGGAA...AACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACTACCATACAAGTCACTaGTCTCTCTGGAACAACTTC +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYYHTSH*SLWNNF
Trigger: GAAGTTGTTCCAGAGAGACCAGTGACTTGTATGGTA...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATACAGTGTGGTATTTCTaGATCCTAGCAGCAATATTT +
Preference number: 4 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYTVWYF*ILAAIF
Trigger: AAATATTGCTGCTAGGATCCAGAAATACCACACTGT...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATATATATGAAACAGTGTaGTATTTCTGGATCCTAGCA +
Preference number: 4 (lower is better)
Translates to: RQWPAILINFQAPVAKDHIYETV*YFWILA
Trigger: TGCTAGGATCCAGAAATACCACACTGTTTCATATAT...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACGCTTTGGAGATCTTTTaGGCTTCTCTTTTGATACAG +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYALEIF*ASLLIQ
Trigger: CTGTATCAAAAGAGAAGCGCAAAAGATCTCCAAAGC...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR GCA 90 bp TGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATTTTAATGGGGTTTTCTCTGCAATTCGATaGTTTTCACTTTGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: CALYLAAHYLIRRHFNGVFSAIR*FSLCGL
Trigger: CAAGCCACAAAGTGAAAAGCATCGAATTGCAGAGAA...AACCCCATTAAAATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CCA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACCCTGGTTTCCTTCAATaGGTGTATTTGTTTCACCAT +
Preference number: 4 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYPGFLQ*VYLFHH
Trigger: ATGGTGAAACAAATACACCCATTGAAGGAAACCAGG...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CCA 90 bp TTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATTTTCACTTTGTGGCTTaGTTCCACAAAGTGAATTGC +
Preference number: 4 (lower is better)
Translates to: LLFSCALYLAAHYLIRRHFHFVA*FHKVNC
Trigger: GCAATTCACTTTGTGGAACCAAGCCACAAAGTGAAA...ATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR TCA 90 bp TGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATTTTAATGGGGTTAGAAACAGATGGTTCTaGAACAATCATAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: CALYLAAHYLIRRHFNGVRNRWF*NNHRRL
Trigger: CAACCTTCTATGATTGTTTCAGAACCATCTGTTTCT...AACCCCATTAAAATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
3UTR CAA 72 bp CCATTACCTGGCTTTATAAAAAGGTCAAGAGTAAATTaGGGTACACCTGTCTCTATACAAGCAGTAGATTTA +
Preference number: 4 (lower is better)
Translates to: PLPGFIKRSRVN*GTPVSIQAVDL
Trigger: TAAATCTACTGCTTGTATAGAGACAGGTGTACCCAAATTTACTCTTGACCTTTTTATAAAGCCAGGTAATGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS GCA 90 bp GCAGGTGGCCCCGGCAACTCCATCGCTGAGGCCACCGACGACTCCTaGAGCTCCAACGCTGTGGTCTTAGGCAGCTCCGGCAACTCCTGC +
Preference number: 5 (lower is better)
Translates to: AGGPGNSIAEATDDS*SSNAVVLGSSGNSC
Trigger: GCAGGAGTTGCCGGAGCTGCCTAAGACCACAGCGTTGGAGCTGCAGGAGTCGTCGGTGGCCTCAGCGATGGAGTTGCCGGGGCCACCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS TCA 90 bp CAACTCCGGCATGGAGGTCGCAGGTGGCCCCGGCAACTCCATCGCTaGGGCCACCGACGACTCCTGCAGCTCCAACGCTGTGGTCTTAGG +
Preference number: 5 (lower is better)
Translates to: QLRHGGRRWPRQLHR*GHRRLLQLQRCGLR
Trigger: CCTAAGACCACAGCGTTGGAGCTGCAGGAGTCGTCGGTGGCCTCAGCGATGGAGTTGCCGGGGCCACCTGCGACCTCCATGCCGGAGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 90 bp TGGCAATTCCTGCGACAACTGTGGCACTGGTGTCACAGAGGGCCCTaGCAACTCAGGCACTGCTGTCGCAGGGGGCCCTGGCAACTCAGG +
Preference number: 5 (lower is better)
Translates to: WQFLRQLWHWCHRGP*QLRHCCRRGPWQLR
Trigger: CCTGAGTTGCCAGGGCCCCCTGCGACAGCAGTGCCTGAGTTGCCAGGGCCCTCTGTGACACCAGTGCCACAGTTGTCGCAGGAATTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 90 bp GCCTCAGGCTGCCCCAGCAACCCTGTTGCCGTTGTCACCTCAGGATaGCCAGGATGTTCCACCGTTGTCATCCCCACAGGCTGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: ASGCPSNPVAVVTSG*PGCSTVVIPTGCSN
Trigger: GTTGGAGCAGCCTGTGGGGATGACAACGGTGGAACATCCTGGGCATCCTGAGGTGACAACGGCAACAGGGTTGCTGGGGCAGCCTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 90 bp GGTGGCTCCAACCCCATGGATGGTGCTGGAAGCCCTGGCAATTCCTaGGACAACTGTGGCACTGGTGTCACAGAGGGCCCTGGCAACTCA +
Preference number: 5 (lower is better)
Translates to: GGSNPMDGAGSPGNS*DNCGTGVTEGPGNS
Trigger: TGAGTTGCCAGGGCCCTCTGTGACACCAGTGCCACAGTTGTCGCAGGAATTGCCAGGGCTTCCAGCACCATCCATGGGGTTGGAGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 90 bp CCCCATGGATGGTGCTGGAAGCCCTGGCAATTCCTGCGACAACTGTaGCACTGGTGTCACAGAGGGCCCTGGCAACTCAGGCACTGCTGT +
Preference number: 5 (lower is better)
Translates to: PHGWCWKPWQFLRQL*HWCHRGPWQLRHCC
Trigger: ACAGCAGTGCCTGAGTTGCCAGGGCCCTCTGTGACACCAGTGCCACAGTTGTCGCAGGAATTGCCAGGGCTTCCAGCACCATCCATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 90 bp TACCTCCTGTGGTGGCTCCAACCCCATGGATGGTGCTGGAAGCCCTaGCAATTCCTGCGACAACTGTGGCACTGGTGTCACAGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: YLLWWLQPHGWCWKP*QFLRQLWHWCHRGP
Trigger: GGGCCCTCTGTGACACCAGTGCCACAGTTGTCGCAGGAATTGCCAGGGCTTCCAGCACCATCCATGGGGTTGGAGCCACCACAGGAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 90 bp CCCTGGCAACTCCTGTGCCATCACAGGTGGCTCTGGTACCTCCTGTaGTGGCTCCAACCCCATGGATGGTGCTGGAAGCCCTGGCAATTC +
Preference number: 5 (lower is better)
Translates to: PWQLLCHHRWLWYLL*WLQPHGWCWKPWQF
Trigger: GAATTGCCAGGGCTTCCAGCACCATCCATGGGGTTGGAGCCACCACAGGAGGTACCAGAGCCACCTGTGATGGCACAGGAGTTGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 90 bp CACCAAAGGCAGCCCTGGCAACTCCTGTGCCATCACAGGTGGCTCTaGTACCTCCTGTGGTGGCTCCAACCCCATGGATGGTGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: HQRQPWQLLCHHRWL*YLLWWLQPHGWCWK
Trigger: CTTCCAGCACCATCCATGGGGTTGGAGCCACCACAGGAGGTACCAGAGCCACCTGTGATGGCACAGGAGTTGCCAGGGCTGCCTTTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 90 bp TGCTGTCACCAAAGGCAGCCCTGGCAACTCCTGTGCCATCACAGGTaGCTCTGGTACCTCCTGTGGTGGCTCCAACCCCATGGATGGTGC +
Preference number: 5 (lower is better)
Translates to: CCHQRQPWQLLCHHR*LWYLLWWLQPHGWC
Trigger: GCACCATCCATGGGGTTGGAGCCACCACAGGAGGTACCAGAGCCACCTGTGATGGCACAGGAGTTGCCAGGGCTGCCTTTGGTGACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 90 bp AGGTGGCTCTGGTACCTCCTGTGGTGGCTCCAACCCCATGGATGGTaGTGGAAGCCCTGGCAATTCCTGCGACAACTGTGGCACTGGTGT +
Preference number: 5 (lower is better)
Translates to: RWLWYLLWWLQPHGW*WKPWQFLRQLWHWC
Trigger: ACACCAGTGCCACAGTTGTCGCAGGAATTGCCAGGGCTTCCAGCACCATCCATGGGGTTGGAGCCACCACAGGAGGTACCAGAGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 90 bp TGGCTCTGGTACCTCCTGTGGTGGCTCCAACCCCATGGATGGTGCTaGAAGCCCTGGCAATTCCTGCGACAACTGTGGCACTGGTGTCAC +
Preference number: 5 (lower is better)
Translates to: WLWYLLWWLQPHGWC*KPWQFLRQLWHWCH
Trigger: GTGACACCAGTGCCACAGTTGTCGCAGGAATTGCCAGGGCTTCCAGCACCATCCATGGGGTTGGAGCCACCACAGGAGGTACCAGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 90 bp TGGCAACTCCTGTGCCATCACAGGTGGCTCTGGTACCTCCTGTGGTaGCTCCAACCCCATGGATGGTGCTGGAAGCCCTGGCAATTCCTG +
Preference number: 5 (lower is better)
Translates to: WQLLCHHRWLWYLLW*LQPHGWCWKPWQFL
Trigger: CAGGAATTGCCAGGGCTTCCAGCACCATCCATGGGGTTGGAGCCACCACAGGAGGTACCAGAGCCACCTGTGATGGCACAGGAGTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 90 bp TGGACCCTCTGGTGGTTCCTCAGGAGGCAATGGTGGTGTCATTGGTaGCTCCTCAGGTGGCAACGGTGGCATTGTTGGGGGCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: WTLWWFLRRQWWCHW*LLRWQRWHCWGLFR
Trigger: CCTGAAGAGCCCCCAACAATGCCACCGTTGCCACCTGAGGAGCCACCAATGACACCACCATTGCCTCCTGAGGAACCACCAGAGGGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CCA 90 bp TGCTGGACCCTCTGGTGGTTCCTCAGGAGGCAATGGTGGTGTCATTaGTGGCTCCTCAGGTGGCAACGGTGGCATTGTTGGGGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: CWTLWWFLRRQWWCH*WLLRWQRWHCWGLF
Trigger: GAAGAGCCCCCAACAATGCCACCGTTGCCACCTGAGGAGCCACCAATGACACCACCATTGCCTCCTGAGGAACCACCAGAGGGTCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS TCA 90 bp CGCTGTCGTCGAGGGCACCTCCAGGGACTGCGACACGGTCATCGTTaGCAGCTCCGATGTTGTCACCACAGACTGAACAGAGATCTCCAG +
Preference number: 5 (lower is better)
Translates to: RCRRGHLQGLRHGHR*QLRCCHHRLNRDLQ
Trigger: CTGGAGATCTCTGTTCAGTCTGTGGTGACAACATCGGAGCTGTCAACGATGACCGTGTCGCAGTCCCTGGAGGTGCCCTCGACGACAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 90 bp AGTGGGCAATGCTGGACCCTCTGGTGGTTCCTCAGGAGGCAATGGTaGTGTCATTGGTGGCTCCTCAGGTGGCAACGGTGGCATTGTTGG +
Preference number: 5 (lower is better)
Translates to: SGQCWTLWWFLRRQW*CHWWLLRWQRWHCW
Trigger: CCAACAATGCCACCGTTGCCACCTGAGGAGCCACCAATGACACCACCATTGCCTCCTGAGGAACCACCAGAGGGTCCAGCATTGCCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CCA 90 bp CTCAGTGGGCAATGCTGGACCCTCTGGTGGTTCCTCAGGAGGCAATaGTGGTGTCATTGGTGGCTCCTCAGGTGGCAACGGTGGCATTGT +
Preference number: 5 (lower is better)
Translates to: LSGQCWTLWWFLRRQ*WCHWWLLRWQRWHC
Trigger: ACAATGCCACCGTTGCCACCTGAGGAGCCACCAATGACACCACCATTGCCTCCTGAGGAACCACCAGAGGGTCCAGCATTGCCCACTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CCA 90 bp AGGCTCCAGCGCAGAAACAACTGGCACAGGAATGGTAACATAGTCTaGCTCAGCCACAACAGGAGGCTCCGGGACAGTCACAACCGAAGG +
Preference number: 5 (lower is better)
Translates to: RLQRRNNWHRNGNIV*LSHNRRLRDSHNRR
Trigger: CCTTCGGTTGTGACTGTCCCGGAGCCTCCTGTTGTGGCTGAGCCAGACTATGTTACCATTCCTGTGCCAGTTGTTTCTGCGCTGGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS GCA 90 bp TCCTGCAGCTCCAACGCTGTGGTCTTAGGCAGCTCCGGCAACTCCTaGGGTCTTGTCATGGATGAATCTGCAATCTCCGATGGTACGTCT +
Preference number: 5 (lower is better)
Translates to: SCSSNAVVLGSSGNS*GLVMDESAISDGTS
Trigger: AGACGTACCATCGGAGATTGCAGATTCATCCATGACAAGACCGCAGGAGTTGCCGGAGCTGCCTAAGACCACAGCGTTGGAGCTGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 90 bp ACCTCAGGATGCCCAGGATGTTCCACCGTTGTCATCCCCACAGGCTaGTCCAACTCTGTCGTCGTCACAGGTTGTTCGGTCAACTCCATT +
Preference number: 5 (lower is better)
Translates to: TSGCPGCSTVVIPTG*SNSVVVTGCSVNSI
Trigger: AATGGAGTTGACCGAACAACCTGTGACGACGACAGAGTTGGAGCAGCCTGTGGGGATGACAACGGTGGAACATCCTGGGCATCCTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS-3UTR CAA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCGCCCCAGCAACCCTGTaGCCGTTGTCACCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSAPATL*PLSPQD
Trigger: ATCCTGAGGTGACAACGGCAACAGGGTTGCTGGGGC...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS TCA 90 bp TGTGGTCTTAGGCAGCTCCGGCAACTCCTGCGGTCTTGTCATGGATaGATCTGCAATCTCCGATGGTACGTCTACAGGCTGCTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: CGLRQLRQLLRSCHG*ICNLRWYVYRLLWQ
Trigger: TTGCCAGAGCAGCCTGTAGACGTACCATCGGAGATTGCAGATTCATCCATGACAAGACCGCAGGAGTTGCCGGAGCTGCCTAAGACCACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 90 bp CTGCTCCAACTCTGTCGTCGTCACAGGTTGTTCGGTCAACTCCATTaGTACTGTTACCGCAGGCTGCTCTGGCAACTCTACTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: LLQLCRRHRLFGQLH*YCYRRLLWQLYCCC
Trigger: ACAGCAGCAGTAGAGTTGCCAGAGCAGCCTGCGGTAACAGTAGCAATGGAGTTGACCGAACAACCTGTGACGACGACAGAGTTGGAGCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 90 bp GATGGCACCTCTGTAGGCCAAGTATTTTCAGCTGTTAATGCTGACTaGTCAGTGGGCAATGCTGGACCCTCTGGTGGTTCCTCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: DGTSVGQVFSAVNAD*SVGNAGPSGGSSGG
Trigger: GCCTCCTGAGGAACCACCAGAGGGTCCAGCATTGCCCACTGAGCAGTCAGCATTAACAGCTGAAAATACTTGGCCTACAGAGGTGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS TCA 90 bp AGAGCTAATACTAGGGCCTCCCAACCACTTGCTGTAACCAGCAGCTaGCAACCAAAAGGTCCTGGGGCTACAGGTCACAAGAGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: RANTRASQPLAVTSS*QPKGPGATGHKRSE
Trigger: CTCACTCCTCTTGTGACCTGTAGCCCCAGGACCTTTTGGTTGTCAGCTGCTGGTTACAGCAAGTGGTTGGGAGGCCCTAGTATTAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429093.6
CDS-3UTR CAA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCGTTCGGTCAACTCCATaGCTACTGTTACCGCAGGCT +
Preference number: 5 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSVRSTP*LLLPQA
Trigger: AGCCTGCGGTAACAGTAGCAATGGAGTTGACCGAAC...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCGTTCGGTCAACTCCATaGCTACTGTTACCGCAGGCT +
Preference number: 5 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSVRSTP*LLLPQA
Trigger: AGCCTGCGGTAACAGTAGCAATGGAGTTGACCGAAC...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp ATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCACTCCAGCACCATCGTaGCCTCAGGCTGCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: MGYVPKMLTSTYNDLFQSTPAPS*PQAAPA
Trigger: TGCTGGGGCAGCCTGAGGCAACGATGGTGCTGGAGT...GGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTACTCCAGCACCATCGTaGCCTCAGGCTGCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLATPAPS*PQAAPA
Trigger: TGCTGGGGCAGCCTGAGGCAACGATGGTGCTGGAGT...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp ACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCGTGGCAACGGTGGCATaGTTGGGGGCTCTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: TYNDLFQSSSCVEPEDLPVATVA*LGALQE
Trigger: CTCCTGAAGAGCCCCCAACAATGCCACCGTTGCCAC...GGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS CCA 90 bp TCTTCATTTGGTAGACTCCTGGCAGAGGCAGCTGCATCACCCGCCTaGTTTCCTTCAATGGGTGTATTTGTTTCACCATTCAGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: SSFGRLLAEAAASPA*FPSMGVFVSPFSWP
Trigger: AGGCCAGCTGAATGGTGAAACAAATACACCCATTGAAGGAAACCAGGCGGGTGATGCAGCTGCCTCTGCCAGGAGTCTACCAAATGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000381692.6
ENST00000455528.5
ENST00000475072.1
ENST00000492229.1
CDS CCA 90 bp AGGTGGCAACGGTGGCATTGTTGGGGGCTCTTCAGGAGGCAAAGGTaGCACCATATATGCCTCTGTATATGTGTCAGTGTAAGAATCGGT +
Preference number: 5 (lower is better)
Translates to: RWQRWHCWGLFRRQR*HHICLCICVSVRIG
Trigger: ACCGATTCTTACACTGACACATATACAGAGGCATATATGGTGCCACCTTTGCCTCCTGAAGAGCCCCCAACAATGCCACCGTTGCCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS-3UTR CAA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCTTGTTGTTGATGTGCTaGGCTCAGGGTACACCTCAG +
Preference number: 5 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSLLLMC*AQGTPQ
Trigger: CTGAGGTGTACCCTGAGCCAAGCACATCAACAACAA...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGGCCCCAGCAACCCTGTaGCCGTTGTCACCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKAPATL*PLSPQD
Trigger: ATCCTGAGGTGACAACGGCAACAGGGTTGCTGGGGC...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS TCA 90 bp TGTGGCTTGGTTCCACAAAGTGAATTGCATCGAGTTACTGTCAAATaGGAAGCTGCGGGTTGTTTCATCTGTCGTCTAACCCGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: CGLVPQSELHRVTVK*EAAGCFICRLTRPC
Trigger: GCAGGGCCGGGTTAGACGACAGATGAAACAACCCGCAGCTTCTCATTTGACAGTAACTCGATGCAATTCACTTTGTGGAACCAAGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATGCAACGGTGGCATTGTaGGGGGCTCTTCAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNATVAL*GALQEA
Trigger: TGCCTCCTGAAGAGCCCCCAACAATGCCACCGTTGC...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCGCAACGGTGGCATTGTaGGGGGCTCTTCAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVATVAL*GALQEA
Trigger: TGCCTCCTGAAGAGCCCCCAACAATGCCACCGTTGC...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp AGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGATCATTCCGACTCCGACGACTaGGGGTTCGACTTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: RQWPAILINFQAPVAKDHSDSDD*GFDFEL
Trigger: GAGCTCGAAGTCGAACCCCAAGTCGTCGGAGTCGGA...ATGATCTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS TCA 90 bp GATTCCTGGACAGAAACAGATGGTTCTGAAACAATCATAGAAGGTTaGAGGACTGACACCGCTGGTTCCAGAACAGGCACAGAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: DSWTETDGSETIIEG*RTDTAGSRTGTEGS
Trigger: GGAGCCTTCTGTGCCTGTTCTGGAACCAGCGGTGTCAGTCCTTCAACCTTCTATGATTGTTTCAGAACCATCTGTTTCTGTCCAGGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS-3UTR CAA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGAAAATCTGCTCGATGTaGGTCGCCATGGCGTCCGCT +
Preference number: 5 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKKICSM*VAMASA
Trigger: AGCGGACGCCATGGCGACCAACATCGAGCAGATTTT...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp CAGGAAGAACTGATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCTTCAATGGGTGTATTaGTTTCACCATTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: QEELIMAGHYRQWLVPNSLQWVY*FHHSAG
Trigger: GCCAGCTGAATGGTGAAACAAATACACCCATTGAAG...GCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATCAGTTCTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCAGCACTATTTCTTCATTaGGTAGACTCCTGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPALFLH*VDSWQR
Trigger: CCTCTGCCAGGAGTCTACCAAATGAAGAAATAGTGC...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp ATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCGCGACACGGTCATCGTaGACAGCTCCGATGTTGTCA +
Preference number: 5 (lower is better)
Translates to: MGYVPKMLTSTYNDLFQSATRSS*TAPMLS
Trigger: TGACAACATCGGAGCTGTCAACGATGACCGTGTCGC...GGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGGCGACACGGTCATCGTaGACAGCTCCGATGTTGTCA +
Preference number: 5 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKATRSS*TAPMLS
Trigger: TGACAACATCGGAGCTGTCAACGATGACCGTGTCGC...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCTTCTCCTCCTGCGTCTaGAACGTGACCGTGAACGTG +
Preference number: 5 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGFSSCV*NVTVNV
Trigger: CACGTTCACGGTCACGTTCAAGACGCAGGAGGAGAA...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAAACTTGGATCTGTGCTTaGGAGATCTTTTGCGCTTCT +
Preference number: 5 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPETWICA*EIFCAS
Trigger: AGAAGCGCAAAAGATCTCCAAAGCACAGATCCAAGT...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp GTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACCCGATAAATTTATGAGAAGCTGCGGGTaGTTTCATCTGTCGTCTAAC +
Preference number: 5 (lower is better)
Translates to: VLNLRICPLRSIPPPDKFMRSCG*FHLSSN
Trigger: GTTAGACGACAGATGAAACAACCCGCAGCTTCTCAT...AAATTTATCGGGTGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS GCA 90 bp ACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTaGCCTCTCCGATCAATCCCTCCACCCGATAAATTTGCTACCACC +
Preference number: 5 (lower is better)
Translates to: TMTFSNPVLVLNLRI*PLRSIPPPDKFATT
Trigger: GGTGGTAGCAAATTTATCGGGTGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS CCA 90 bp AAGAAGACTCTGAAGCTCTTTCTGGCATACTACTTACAACCGGGCTaGCAGCAGATCTGTCACGTCCAACATCACTTGCAAGTAAAGGTC +
Preference number: 5 (lower is better)
Translates to: KKTLKLFLAYYLQPG*QQICHVQHHLQVKV
Trigger: GACCTTTACTTGCAAGTGATGTTGGACGTGACAGATCTGCTGCCAGCCCGGTTGTAAGTAGTATGCCAGAAAGAGCTTCAGAGTCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS-3UTR CAA 90 bp GCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTAAAATCTGCTCGATGTaGGTCGCCATGGCGTCCGCT +
Preference number: 5 (lower is better)
Translates to: AMYPRCSHQPTMTFSNPVKICSM*VAMASA
Trigger: AGCGGACGCCATGGCGACCAACATCGAGCAGATTTT...AACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp ACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCAAGGCTCTAACACTTTaGCTACTGGGGGCTCTACCA +
Preference number: 5 (lower is better)
Translates to: TYNDLFQSSSCVEPEDLPKALTL*LLGALP
Trigger: TGGTAGAGCCCCCAGTAGCAAAAGTGTTAGAGCCTT...GGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp AATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACTGGAAAATCCATTGTaGTTGATGTGCTTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: NPVLVLNLRICPLRSIPPLENPL*LMCLAQ
Trigger: CTGAGCCAAGCACATCAACAACAATGGATTTTCCAG...TGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAAACTCTGGAAAATCCATaGTTGTTGATGTGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPETLENP*LLMCLA
Trigger: AGCCAAGCACATCAACAACAATGGATTTTCCAGAGT...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGCAGGATGTTCCACCGTaGTCATCCCCACAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLQDVPP*SSPQAA
Trigger: AGCAGCCTGTGGGGATGACAACGGTGGAACATCCTG...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp CTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATTTGACAGCTCCGATGTaGTCACCACAGACTGAACAG +
Preference number: 5 (lower is better)
Translates to: LFQSSSCVEPEDLPSPINLTAPM*SPQTEQ
Trigger: CTGTTCAGTCTGTGGTGACAACATCGGAGCTGTCAA...ATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp ACCCAGAGAAACAGTAAGAAACCATCATTAAGGGCAATGGGCTATGTACCCAAGCTCCGAAATCTCACTTaGACTCACAGGAGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: TQRNSKKPSLRAMGYVPKLRNLT*THRRLR
Trigger: CCTGAGCCTCCTGTGAGTCAAAGTGAGATTTCGGAG...CTTGGGTACATAGCCCATTGCCCTTAATGATGGTTTCTTACTGTTTCTCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp TCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGTTCTCCTCCTGCGTCTaGAACGTGACCGTGAACGTG +
Preference number: 5 (lower is better)
Translates to: SHQPTMTFSNPVLVLNLRFSSCV*NVTVNV
Trigger: CACGTTCACGGTCACGTTCAAGACGCAGGAGGAGAA...CCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp CTTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATCCGACTCCGACGACTaGGGGTTCGACTTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: LAVFMCTIFSSTLFNQAASDSDD*GFDFEL
Trigger: GAGCTCGAAGTCGAACCCCAAGTCGTCGGAGTCGGA...TGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp CAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCCTCCACCCGATAAATTaGCTACCACCAAAATCTAGA +
Preference number: 5 (lower is better)
Translates to: QSSSCVEPEDLPSPINPSLHPIN*LPPKSR
Trigger: TCTAGATTTTGGTGGTAGCAAATTTATCGGGTGGAG...GGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS TCA 90 bp GGCTCTGGAGATGTGCTCTCCACAGATTTCAGCACAGACTTCATCTaGTACTCCACTGACATTGTTACAACTGGCTCAGATGACTTCAAC +
Preference number: 5 (lower is better)
Translates to: GSGDVLSTDFSTDFI*YSTDIVTTGSDDFN
Trigger: GTTGAAGTCATCTGAGCCAGTTGTAACAATGTCAGTGGAGTATCAGATGAAGTCTGTGCTGAAATCTGTGGAGAGCACATCTCCAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS TCA 90 bp TTTCTGAAGGCTCTAACACTTTTGCTACTGGGGGCTCTACCAACATaGTCTTTGATGGCTCTGGAGATGTGCTCTCCACAGATTTCAGCA +
Preference number: 5 (lower is better)
Translates to: FLKALTLLLLGALPT*SLMALEMCSPQISA
Trigger: TGCTGAAATCTGTGGAGAGCACATCTCCAGAGCCATCAAAGATCATGTTGGTAGAGCCCCCAGTAGCAAAAGTGTTAGAGCCTTCAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS TCA 90 bp AGTATCATTGGTGTGGACTCTATAGCCACCTCAGTTGGTATTACTTaGGTCTGCTCTGAGACTGTGACAGCAGGCTCTGAAACTGTCACA +
Preference number: 5 (lower is better)
Translates to: SIIGVDSIATSVGIT*VCSETVTAGSETVT
Trigger: TGTGACAGTTTCAGAGCCTGCTGTCACAGTCTCAGAGCAGACTCAAGTAATACCAACTGAGGTGGCTATAGAGTCCACACCAATGATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS GCA 90 bp CTTGTCATGGATGAATCTGCAATCTCCGATGGTACGTCTACAGGCTaGTCTGGCAATCTTAGCGCTTCAATTGCAGATGACTCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: LVMDESAISDGTSTG*SGNLSASIADDSGK
Trigger: TTTTCCAGAGTCATCTGCAATTGAAGCGCTAAGATTGCCAGAGCAGCCTGTAGACGTACCATCGGAGATTGCAGATTCATCCATGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS-3UTR CAA 90 bp ACCCAGAGAAACAGTAAGAAACCATCATTAAGGGCAATGGGCTATGTACCCAAGTTGTTGTTGATGTGCTaGGCTCAGGGTACACCTCAG +
Preference number: 5 (lower is better)
Translates to: TQRNSKKPSLRAMGYVPKLLLMC*AQGTPQ
Trigger: CTGAGGTGTACCCTGAGCCAAGCACATCAACAACAA...CTTGGGTACATAGCCCATTGCCCTTAATGATGGTTTCTTACTGTTTCTCTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACGTGGCAACGGTGGCATaGTTGGGGGCTCTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYVATVA*LGALQE
Trigger: CTCCTGAAGAGCCCCCAACAATGCCACCGTTGCCAC...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCCTCCGAAATCTCACTTaGACTCACAGGAGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVLRNLT*THRRLR
Trigger: CCTGAGCCTCCTGTGAGTCAAAGTGAGATTTCGGAG...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp CAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCTGATGCTAACACAGTaGGTTCAGCTGACATGGCGG +
Preference number: 5 (lower is better)
Translates to: QWAMYPRCSHQPTMTFSNLMLTQ*VQLTWR
Trigger: CCGCCATGTCAGCTGAACCAACTGTGTTAGCATCAG...ATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAATTGTGTTCAGAAGATTaGGAACGCTTACTTCGAGAT +
Preference number: 5 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPELCSED*ERLLRD
Trigger: ATCTCGAAGTAAGCGTTCCAAATCTTCTGAACACAA...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp CTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATAATCCAGTTCTTGTGTaGAACCTGAGGATCTGCCCT +
Preference number: 5 (lower is better)
Translates to: LFQSSSCVEPEDLPSPINNPVLV*NLRICP
Trigger: AGGGCAGATCCTCAGGTTCAACACAAGAACTGGATT...ATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp GATAATGGCCGGCCATTATCGCCAATGGCTGGTACCAAACAGCCAAAACCCGAAAGATTGTCTGTGTCTTaGCGTATATGCAGTATACTC +
Preference number: 5 (lower is better)
Translates to: DNGRPLSPMAGTKQPKPERLSVS*RICSIL
Trigger: GAGTATACTGCATATACGCAAAGACACAGACAATCT...TTCGGGTTTTGGCTGTTTGGTACCAGCCATTGGCGATAATGGCCGGCCATTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCGGGGAACAGAATATATaGACAGTGGCAGGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGGEQNI*TVAGWH
Trigger: ATGCCAGCCTGCCACTGTCAATATATTCTGTTCCCC...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS GCA 90 bp CGTAGTTCTGTATCTAAGACCCCAGAAAGTACTTCCTCTATCTTCTaGACTATTTCTTCATTTGGTAGACTCCTGGCAGAGGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: RSSVSKTPESTSSIF*TISSFGRLLAEAAA
Trigger: TGCAGCTGCCTCTGCCAGGAGTCTACCAAATGAAGAAATAGTGCAGAAGATAGAGGAAGTACTTTCTGGGGTCTTAGATACAGAACTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000381692.6
ENST00000455528.5
ENST00000475072.1
ENST00000492229.1
CDS-3UTR CAA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCAAGGCTCTAACACTTTaGCTACTGGGGGCTCTACCA +
Preference number: 5 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVKALTL*LLGALP
Trigger: TGGTAGAGCCCCCAGTAGCAAAAGTGTTAGAGCCTT...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATTGTCGTCGTCACAGGTaGTTCGGTCAACTCCATTGC +
Preference number: 5 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYCRRHR*FGQLHC
Trigger: GCAATGGAGTTGACCGAACAACCTGTGACGACGACA...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp TGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATTTTAATGGGGTTCAGGATGTTCCACCGTaGTCATCCCCACAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: CALYLAAHYLIRRHFNGVQDVPP*SSPQAA
Trigger: AGCAGCCTGTGGGGATGACAACGGTGGAACATCCTG...AACCCCATTAAAATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCTTGACAGCTCCGATGTaGTCACCACAGACTGAACAG +
Preference number: 5 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVLTAPM*SPQTEQ
Trigger: CTGTTCAGTCTGTGGTGACAACATCGGAGCTGTCAA...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGCTGATGCTAACACAGTaGGTTCAGCTGACATGGCGG +
Preference number: 5 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLLMLTQ*VQLTWR
Trigger: CCGCCATGTCAGCTGAACCAACTGTGTTAGCATCAG...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp GTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATCCCTCCACCCGATAAATTTTTTTGCGCTTCTCTTTaGATACAGATCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: VLNLRICPLRSIPPPDKFFCASL*IQIFFL
Trigger: GAGGAAGAAGATCTGTATCAAAAGAGAAGCGCAAAA...AAATTTATCGGGTGGAGGGATTGATCGGAGAGGGCAGATCCTCAGGTTCAACAC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp AAACCATCATTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACAAATCTGTCAGACGTTaGGGTGATCTGCCTCGTTCA +
Preference number: 5 (lower is better)
Translates to: KPSLRAMGYVPKMLTSTYKSVRR*GDLPRS
Trigger: TGAACGAGGCAGATCACCCAAACGTCTGACAGATTT...GTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAATGATGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS GCA 90 bp TTTGTCATGGATGGTTCTGGCATTACTGCCACAGACTGCTCTGACTaGTCTGAGATTACTGATGTAGATACAACTGACAGTTCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: FVMDGSGITATDCSD*SEITDVDTTDSSAV
Trigger: AACTGCAGAACTGTCAGTTGTATCTACATCAGTAATCTCAGAGCAGTCAGAGCAGTCTGTGGCAGTAATGCCAGAACCATCCATGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 90 bp TCCAGAATCTTTGTCATGGATGGTTCTGGCATTACTGCCACAGACTaGTCTGACTGCTCTGAGATTACTGATGTAGATACAACTGACAGT +
Preference number: 5 (lower is better)
Translates to: SRIFVMDGSGITATD*SDCSEITDVDTTDS
Trigger: ACTGTCAGTTGTATCTACATCAGTAATCTCAGAGCAGTCAGAGCAGTCTGTGGCAGTAATGCCAGAACCATCCATGACAAAGATTCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS-3UTR CAA 90 bp ACCCAGAGAAACAGTAAGAAACCATCATTAAGGGCAATGGGCTATGTACCCAAGCTTCAATGGGTGTATTaGTTTCACCATTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: TQRNSKKPSLRAMGYVPKLQWVY*FHHSAG
Trigger: GCCAGCTGAATGGTGAAACAAATACACCCATTGAAG...CTTGGGTACATAGCCCATTGCCCTTAATGATGGTTTCTTACTGTTTCTCTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGACTGCAGGGGATTCATaGGTCTCAGATGGGCCAAAT +
Preference number: 5 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLTAGDS*VSDGPN
Trigger: ATTTGGCCCATCTGAGACCAATGAATCCCCTGCAGT...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCGCTCTGATACCTCCATaGATACTACAGGAGGTTCTA +
Preference number: 5 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGALIPP*ILQEVL
Trigger: TAGAACCTCCTGTAGTATCAATGGAGGTATCAGAGC...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCAGGAATCCAGAATCTTaGTCATGGATGGTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGRNPES*SWMVLA
Trigger: TGCCAGAACCATCCATGACAAAGATTCTGGATTCCT...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp AAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTGAAAATCCATTGTTGTaGATGTGCTTGGCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: KQSQFLPEMQRNRLHYLAENPLL*MCLAQG
Trigger: ACCCTGAGCCAAGCACATCAACAACAATGGATTTTC...AGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCCTGGAAAATCCATTGTaGTTGATGTGCTTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGLENPL*LMCLAQ
Trigger: CTGAGCCAAGCACATCAACAACAATGGATTTTCCAG...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCAACTCCTGCGGTCTaGTCATGGATGAATCTGCAA +
Preference number: 5 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLATPAV*SWMNLQ
Trigger: TTGCAGATTCATCCATGACAAGACCGCAGGAGTTGC...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp ACCCAGAGAAACAGTAAGAAACCATCATTAAGGGCAATGGGCTATGTACCCAAGCACGTCCAACATCACTaGCAAGTAAAGGTCCTTCAA +
Preference number: 5 (lower is better)
Translates to: TQRNSKKPSLRAMGYVPKHVQHH*QVKVLQ
Trigger: TTGAAGGACCTTTACTTGCAAGTGATGTTGGACGTG...CTTGGGTACATAGCCCATTGCCCTTAATGATGGTTTCTTACTGTTTCTCTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp CTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGATCTGCCCTCTCCGATCAATGTACGCTTGCGTGATTaGTGTTCAGAAGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: LFQSSSCVEPEDLPSPINVRLRD*CSEDLE
Trigger: TTCCAAATCTTCTGAACACAAATCACGCAAGCGTAC...ATTGATCGGAGAGGGCAGATCCTCAGGTTCAACACAAGAACTGGATTGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCGATTCACTGGTACGCTaGCGTGATTTGTGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGDSLVR*RDLCSE
Trigger: TTCTGAACACAAATCACGCAAGCGTACCAGTGAATC...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp ATGGGCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCACTTGGATCTGTGCTTaGGAGATCTTTTGCGCTTCT +
Preference number: 5 (lower is better)
Translates to: MGYVPKMLTSTYNDLFQSTWICA*EIFCAS
Trigger: AGAAGCGCAAAAGATCTCCAAAGCACAGATCCAAGT...GGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS TCA 90 bp CTCTGCAATTCGATGCTTTTCACTTTGTGGCTTGGTTCCACAAAGTaGATTGCATCGAGTTACTGTCAAATGAGAAGCTGCGGGTTGTTT +
Preference number: 5 (lower is better)
Translates to: LCNSMLFTLWLGSTK*IASSYCQMRSCGLF
Trigger: AAACAACCCGCAGCTTCTCATTTGACAGTAACTCGATGCAATTCACTTTGTGGAACCAAGCCACAAAGTGAAAAGCATCGAATTGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS TCA 90 bp CAGCTACAAGGATTTGGCCCTGAAACAAGTTTCCATACAGAGGGGTaGAAGTTCACAGGTTATTCTGTGAACAGTCATCTCTCTTGTATC +
Preference number: 5 (lower is better)
Translates to: QLQGFGPETSFHTEG*KFTGYSVNSHLSCI
Trigger: GATACAAGAGAGATGACTGTTCACAGAATAACCTGTGAACTTTCACCCCTCTGTATGGAAACTTGTTTCAGGGCCAAATCCTTGTAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478183.5
CDS CCA 90 bp TCTCCTCCACTACTTTCTTTAGGGCTGAGCAGAGCTGCTAATGTCTaGTCACTCTCTTTTACAGGTAATGGTTCTTCTGTATCCTTACTA +
Preference number: 5 (lower is better)
Translates to: SPPLLSLGLSRAANV*SLSFTGNGSSVSLL
Trigger: TAGTAAGGATACAGAAGAACCATTACCTGTAAAAGAGAGTGACCAGACATTAGCAGCTCTGCTCAGCCCTAAAGAAAGTAGTGGAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS-3UTR CAA 90 bp AAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAAACTGCAGGGGATTCATaGGTCTCAGATGGGCCAAAT +
Preference number: 5 (lower is better)
Translates to: KMLTSTYNDLFQSSSCVETAGDS*VSDGPN
Trigger: ATTTGGCCCATCTGAGACCAATGAATCCCCTGCAGT...TTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp TCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGGCTCTGATACCTCCATaGATACTACAGGAGGTTCTA +
Preference number: 5 (lower is better)
Translates to: SHQPTMTFSNPVLVLNLRALIPP*ILQEVL
Trigger: TAGAACCTCCTGTAGTATCAATGGAGGTATCAGAGC...CCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp GCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTAGGAATCCAGAATCTTaGTCATGGATGGTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: AMYPRCSHQPTMTFSNPVRNPES*SWMVLA
Trigger: TGCCAGAACCATCCATGACAAAGATTCTGGATTCCT...AACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp AAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAAGCAACTCCTGCGGTCTaGTCATGGATGAATCTGCAA +
Preference number: 5 (lower is better)
Translates to: KMLTSTYNDLFQSSSCVEATPAV*SWMNLQ
Trigger: TTGCAGATTCATCCATGACAAGACCGCAGGAGTTGC...TTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp TGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATTTTAATGGGGTTTGTCGTCGTCACAGGTaGTTCGGTCAACTCCATTGC +
Preference number: 5 (lower is better)
Translates to: CALYLAAHYLIRRHFNGVCRRHR*FGQLHC
Trigger: GCAATGGAGTTGACCGAACAACCTGTGACGACGACA...AACCCCATTAAAATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp CTTTCAGGCAATGGCCAGCTATTCTTATTAATTTCCAAGCTCCGGTGGCAAAAGGTACGCTTGCGTGATTaGTGTTCAGAAGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: LSGNGQLFLLISKLRWQKVRLRD*CSEDLE
Trigger: TTCCAAATCTTCTGAACACAAATCACGCAAGCGTAC...CTTTTGCCACCGGAGCTTGGAAATTAATAAGAATAGCTGGCCATTGCCTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCTTTCTTTCCCTAGACTaGGATCTGTGCTTTGGAGAT +
Preference number: 5 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGFLSLD*DLCFGD
Trigger: ATCTCCAAAGCACAGATCCAAGTCTAGGGAAAGAAA...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp TTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATAGGGAGGGCCCAATGTaGGGTAGGGATGTGATAACA +
Preference number: 5 (lower is better)
Translates to: LLFSCALYLAAHYLIRRHREGPM*GRDVIT
Trigger: TGTTATCACATCCCTACCCAACATTGGGCCCTCCCT...ATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS GCA 90 bp CAATTCGATGCTTTTCACTTTGTGGCTTGGTTCCACAAAGTGAATTaGATCGAGTTACTGTCAAATGAGAAGCTGCGGGTTGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: QFDAFHFVAWFHKVN*IELLSNEKLRVVSS
Trigger: AGATGAAACAACCCGCAGCTTCTCATTTGACAGTAACTCGATGCAATTCACTTTGTGGAACCAAGCCACAAAGTGAAAAGCATCGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp GCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTACTCTGGAAAATCCATaGTTGTTGATGTGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: AMYPRCSHQPTMTFSNPVTLENP*LLMCLA
Trigger: AGCCAAGCACATCAACAACAATGGATTTTCCAGAGT...AACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp GCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTAAATAGTTGTACCTaGGACTACCTTCCCACAAGT +
Preference number: 5 (lower is better)
Translates to: AMYPRCSHQPTMTFSNPVLNSCT*DYLPTS
Trigger: ACTTGTGGGAAGGTAGTCCAAGGTACAACTATTTAG...AACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp AAACCATCATTAAGGGCAATGGGCTATGTACCCAAGATGCTCACATCAACCTACTGGAAATTTCAACGTTaGAATTCCACTTCTCCGACT +
Preference number: 5 (lower is better)
Translates to: KPSLRAMGYVPKMLTSTYWKFQR*NSTSPT
Trigger: AGTCGGAGAAGTGGAATTCAAACGTTGAAATTTCCA...GTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTTAATGATGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCCCAAAACCCGAAATGTaGATGCGAAAGAAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVPKPEM*MRKKFL
Trigger: AAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGG...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp AAACAGCCAAAACCCGAAATGTTGATGCGAAAGAAGTTCCTTTCAGGCAATGGCAGGTCAAGAGTAAATTaGGGTACACCTGTCTCTATA +
Preference number: 5 (lower is better)
Translates to: KQPKPEMLMRKKFLSGNGRSRVN*GTPVSI
Trigger: TATAGAGACAGGTGTACCCAAATTTACTCTTGACCT...GCCATTGCCTGAAAGGAACTTCTTTCGCATCAACATTTCGGGTTTTGGCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp GCTATGTACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTATCAGTAGGATCTGTTaGTACAGATACGCATCTACT +
Preference number: 5 (lower is better)
Translates to: AMYPRCSHQPTMTFSNPVISRIC*YRYAST
Trigger: AGTAGATGCGTATCTGTACAAACAGATCCTACTGAT...AACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp TCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTGAACCTGAGGTTGTGTTCAGAAGATTaGGAACGCTTACTTCGAGAT +
Preference number: 5 (lower is better)
Translates to: SHQPTMTFSNPVLVLNLRLCSED*ERLLRD
Trigger: ATCTCGAAGTAAGCGTTCCAAATCTTCTGAACACAA...CCTCAGGTTCAACACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp TCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGGCTTTATAAAAAGGTCTTTTGCGCTTCTCTTTaGATACAGATCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SFLRCKGTDSITWLYKKVFCASL*IQIFFL
Trigger: GAGGAAGAAGATCTGTATCAAAAGAGAAGCGCAAAA...GACCTTTTTATAAAGCCAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACAAATCTGTCAGACGTTaGGGTGATCTGCCTCGTTCA +
Preference number: 5 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYKSVRR*GDLPRS
Trigger: TGAACGAGGCAGATCACCCAAACGTCTGACAGATTT...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp TACCCAAGATGCTCACATCAACCTACAATGACCTTTTCCAATCCAGTTCTTGTGTTTTCACTTTGTGGCTaGGTTCCACAAAGTGAATTG +
Preference number: 5 (lower is better)
Translates to: YPRCSHQPTMTFSNPVLVFSLCG*VPQSEL
Trigger: CAATTCACTTTGTGGAACCAAGCCACAAAGTGAAAA...CACAAGAACTGGATTGGAAAAGGTCATTGTAGGTTGATGTGAGCATCTTGGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp CTTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATCGATGCTTTTCACTTaGTGGCTTGGTTCCACAAAG +
Preference number: 5 (lower is better)
Translates to: LAVFMCTIFSSTLFNQAASMLFT*WLGSTK
Trigger: CTTTGTGGAACCAAGCCACAAAGTGAAAAGCATCGA...TGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp ATAAAGCAAAGTCAATTCCTTCCTGAGATGCAAAGGAACAGACTCCATTACCTGCACTCCTCAGTCAGTTaGGCTTCTAAAACTCAGTTA +
Preference number: 5 (lower is better)
Translates to: IKQSQFLPEMQRNRLHYLHSSVS*ASKTQL
Trigger: TAACTGAGTTTTAGAAGCCAAACTGACTGAGGAGTG...CAGGTAATGGAGTCTGTTCCTTTGCATCTCAGGAAGGAATTGACTTTGCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS TCA 90 bp GAATGCAATGCAATCTCCTGCATGCCAATCTCTGGAGCAAGATTTTaGTCACCAGAGGATAGATTAATTCCTTTCATAACATGTGATGAC +
Preference number: 5 (lower is better)
Translates to: ECNAISCMPISGARF*SPEDRLIPFITCDD
Trigger: GTCATCACATGTTATGAAAGGAATTAATCTATCCTCTGGTGATCAAAATCTTGCTCCAGAGATTGGCATGCAGGAGATTGCATTGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS TCA 90 bp AAACAAGTTTCCATACAGAGGGGTGAAAGTTCACAGGTTATTCTGTaGACAGTCATCTCTCTTGTATCCAACCCACTGAACCATAATTTC +
Preference number: 5 (lower is better)
Translates to: KQVSIQRGESSQVIL*TVISLVSNPLNHNF
Trigger: GAAATTATGGTTCAGTGGGTTGGATACAAGAGAGATGACTGTTCACAGAATAACCTGTGAACTTTCACCCCTCTGTATGGAAACTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478183.5
CDS-3UTR CAA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATATCAGTAGGATCTGTTaGTACAGATACGCATCTACT +
Preference number: 5 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYISRIC*YRYAST
Trigger: AGTAGATGCGTATCTGTACAAACAGATCCTACTGAT...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp CTTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCACATGAGATTTCGTCTTaGACTCAGATTCTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: LAVFMCTIFSSTLFNQAAHEISS*TQILLA
Trigger: AGCCAGAAGAATCTGAGTCAAAGACGAAATCTCATG...TGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp TTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATGAAAATCCATTGTTGTaGATGTGCTTGGCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: LLFSCALYLAAHYLIRRHENPLL*MCLAQG
Trigger: ACCCTGAGCCAAGCACATCAACAACAATGGATTTTC...ATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACCACGTCCAACATCACTaGCAAGTAAAGGTCCTTCAA +
Preference number: 5 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYHVQHH*QVKVLQ
Trigger: TTGAAGGACCTTTACTTGCAAGTGATGTTGGACGTG...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp TTGCTGTTTTCATGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATGATTCACTGGTACGCTaGCGTGATTTGTGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: LLFSCALYLAAHYLIRRHDSLVR*RDLCSE
Trigger: TTCTGAACACAAATCACGCAAGCGTACCAGTGAATC...ATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACATGAAAACAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp TGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATGCAGTATACCATGAGATTTCGTCTTaGACTCAGATTCTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: WQKIISEDCLCLCVYAVYHEISS*TQILLA
Trigger: AGCCAGAAGAATCTGAGTCAAAGACGAAATCTCATG...GTATACTGCATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp TGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATTTTAATGGGGTTTTTCTTTCCCTAGACTaGGATCTGTGCTTTGGAGAT +
Preference number: 5 (lower is better)
Translates to: CALYLAAHYLIRRHFNGVFLSLD*DLCFGD
Trigger: ATCTCCAAAGCACAGATCCAAGTCTAGGGAAAGAAA...AACCCCATTAAAATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS-3UTR CAA 90 bp AAGCTCCGGTGGCAAAAGATCATTTCTGAAGATTGTCTGTGTCTTTGCGTATATATCAAGGAATATTCCTaGAAGAGTTCTAAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: KLRWQKIISEDCLCLCVYIKEYS*KSSKPD
Trigger: ATCTGGCTTAGAACTCTTCAAGGAATATTCCTTGAT...ATATACGCAAAGACACAGACAATCTTCAGAAATGATCTTTTGCCACCGGAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381679.8
CDS-3UTR CAA 90 bp TGTGCACTATATTTAGCAGCACATTATTTAATCAGGCGGCATTTTAATGGGGTTGTTCCACAAAGTGAATaGCATCGAGTTACTGTCAAA +
Preference number: 5 (lower is better)
Translates to: CALYLAAHYLIRRHFNGVVPQSE*HRVTVK
Trigger: TTTGACAGTAACTCGATGCAATTCACTTTGTGGAAC...AACCCCATTAAAATGCCGCCTGATTAAATAATGTGCTGCTAAATATAGTGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS TCA 72 bp CATGGAGGTCGCAGGTGGCCCCGGCAACTCCATCGCTaGGGCCACCGACGACTCCTGCAGCTCCAACGCTGT +
Preference number: 6 (lower is better)
Translates to: HGGRRWPRQLHR*GHRRLLQLQRC
Trigger: ACAGCGTTGGAGCTGCAGGAGTCGTCGGTGGCCTCAGCGATGGAGTTGCCGGGGCCACCTGCGACCTCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 72 bp CCCGGCAACTCCATCGCTGAGGCCACCGACGACTCCTaGAGCTCCAACGCTGTGGTCTTAGGCAGCTCCGGC +
Preference number: 6 (lower is better)
Translates to: PGNSIAEATDDS*SSNAVVLGSSG
Trigger: GCCGGAGCTGCCTAAGACCACAGCGTTGGAGCTGCAGGAGTCGTCGGTGGCCTCAGCGATGGAGTTGCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 72 bp CAGCCCTGGCAACTCCTGTGCCATCACAGGTGGCTCTaGTACCTCCTGTGGTGGCTCCAACCCCATGGATGG +
Preference number: 6 (lower is better)
Translates to: QPWQLLCHHRWL*YLLWWLQPHGW
Trigger: CCATCCATGGGGTTGGAGCCACCACAGGAGGTACCAGAGCCACCTGTGATGGCACAGGAGTTGCCAGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 72 bp TGCTGCTGTCACCAAAGGCAGCCCTGGCAACTCCTGTaGCATCACAGGTGGCTCTGGTACCTCCTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: CCCHQRQPWQLL*HHRWLWYLLWW
Trigger: CCACCACAGGAGGTACCAGAGCCACCTGTGATGGCACAGGAGTTGCCAGGGCTGCCTTTGGTGACAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 72 bp CACCATCGTTGCCTCAGGCTGCCCCAGCAACCCTGTTaGCGTTGTCACCTCAGGATGCCCAGGATGTTCCAC +
Preference number: 6 (lower is better)
Translates to: HHRCLRLPQQPC*RCHLRMPRMFH
Trigger: GTGGAACATCCTGGGCATCCTGAGGTGACAACGGCAACAGGGTTGCTGGGGCAGCCTGAGGCAACGATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 72 bp GATTCCAGCGCTGTCGTCGAGGGCACCTCCAGGGACTaGGACACGGTCATCGTTGACAGCTCCGATGTTGTC +
Preference number: 6 (lower is better)
Translates to: DSSAVVEGTSRD*DTVIVDSSDVV
Trigger: GACAACATCGGAGCTGTCAACGATGACCGTGTCGCAGTCCCTGGAGGTGCCCTCGACGACAGCGCTGGAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 72 bp CAAAGGCAGCCCTGGCAACTCCTGTGCCATCACAGGTaGCTCTGGTACCTCCTGTGGTGGCTCCAACCCCAT +
Preference number: 6 (lower is better)
Translates to: QRQPWQLLCHHR*LWYLLWWLQPH
Trigger: ATGGGGTTGGAGCCACCACAGGAGGTACCAGAGCCACCTGTGATGGCACAGGAGTTGCCAGGGCTGCCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 72 bp TGGTACCTCCTGTGGTGGCTCCAACCCCATGGATGGTaGTGGAAGCCCTGGCAATTCCTGCGACAACTGTGG +
Preference number: 6 (lower is better)
Translates to: WYLLWWLQPHGW*WKPWQFLRQLW
Trigger: CCACAGTTGTCGCAGGAATTGCCAGGGCTTCCAGCACCATCCATGGGGTTGGAGCCACCACAGGAGGTACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 72 bp GCTGCGGGTTGTTTCATCTGTCGTCTAACCCGGCCCTaGCGTTTAACCCGGCCCTCTGAGGGCAAATTGCTG +
Preference number: 6 (lower is better)
Translates to: AAGCFICRLTRP*RLTRPSEGKLL
Trigger: CAGCAATTTGCCCTCAGAGGGCCGGGTTAAACGGCAGGGCCGGGTTAGACGACAGATGAAACAACCCGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS CCA 72 bp TGGTGGCTCCAACCCCATGGATGGTGCTGGAAGCCCTaGCAATTCCTGCGACAACTGTGGCACTGGTGTCAC +
Preference number: 6 (lower is better)
Translates to: WWLQPHGWCWKP*QFLRQLWHWCH
Trigger: GTGACACCAGTGCCACAGTTGTCGCAGGAATTGCCAGGGCTTCCAGCACCATCCATGGGGTTGGAGCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 72 bp TACCTCCTGTGGTGGCTCCAACCCCATGGATGGTGCTaGAAGCCCTGGCAATTCCTGCGACAACTGTGGCAC +
Preference number: 6 (lower is better)
Translates to: YLLWWLQPHGWC*KPWQFLRQLWH
Trigger: GTGCCACAGTTGTCGCAGGAATTGCCAGGGCTTCCAGCACCATCCATGGGGTTGGAGCCACCACAGGAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 72 bp TGGTGGTGTCATTGGTGGCTCCTCAGGTGGCAACGGTaGCATTGTTGGGGGCTCTTCAGGAGGCAAAGGTGG +
Preference number: 6 (lower is better)
Translates to: WWCHWWLLRWQR*HCWGLFRRQRW
Trigger: CCACCTTTGCCTCCTGAAGAGCCCCCAACAATGCCACCGTTGCCACCTGAGGAGCCACCAATGACACCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CCA 72 bp TGGTGGTTCCTCAGGAGGCAATGGTGGTGTCATTGGTaGCTCCTCAGGTGGCAACGGTGGCATTGTTGGGGG +
Preference number: 6 (lower is better)
Translates to: WWFLRRQWWCHW*LLRWQRWHCWG
Trigger: CCCCCAACAATGCCACCGTTGCCACCTGAGGAGCCACCAATGACACCACCATTGCCTCCTGAGGAACCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CAA 72 bp CCGTTGTCACCTCAGGATGCCCAGGATGTTCCACCGTaGTCATCCCCACAGGCTGCTCCAACTCTGTCGTCG +
Preference number: 6 (lower is better)
Translates to: PLSPQDAQDVPP*SSPQAAPTLSS
Trigger: CGACGACAGAGTTGGAGCAGCCTGTGGGGATGACAACGGTGGAACATCCTGGGCATCCTGAGGTGACAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CAA 90 bp GCGCTGTCGTCGAGGGCACCTCCAGGGACTGCGACACGGTCATCGTaGACAGCTCCGATGTTGTCACCACAGACTGAACAGAGATCTCCA +
Preference number: 6 (lower is better)
Translates to: ALSSRAPPGTATRSS*TAPMLSPQTEQRSP
Trigger: TGGAGATCTCTGTTCAGTCTGTGGTGACAACATCGGAGCTGTCAACGATGACCGTGTCGCAGTCCCTGGAGGTGCCCTCGACGACAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CAA 90 bp ACCCTGTTGCCGTTGTCACCTCAGGATGCCCAGGATGTTCCACCGTaGTCATCCCCACAGGCTGCTCCAACTCTGTCGTCGTCACAGGTT +
Preference number: 6 (lower is better)
Translates to: TLLPLSPQDAQDVPP*SSPQAAPTLSSSQV
Trigger: AACCTGTGACGACGACAGAGTTGGAGCAGCCTGTGGGGATGACAACGGTGGAACATCCTGGGCATCCTGAGGTGACAACGGCAACAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CAA 90 bp GCACCTCCAGGGACTGCGACACGGTCATCGTTGACAGCTCCGATGTaGTCACCACAGACTGAACAGAGATCTCCAGCGCCACAGTTGCCA +
Preference number: 6 (lower is better)
Translates to: APPGTATRSSLTAPM*SPQTEQRSPAPQLP
Trigger: TGGCAACTGTGGCGCTGGAGATCTCTGTTCAGTCTGTGGTGACAACATCGGAGCTGTCAACGATGACCGTGTCGCAGTCCCTGGAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS TCA 72 bp CGAGGGCACCTCCAGGGACTGCGACACGGTCATCGTTaGCAGCTCCGATGTTGTCACCACAGACTGAACAGA +
Preference number: 6 (lower is better)
Translates to: RGHLQGLRHGHR*QLRCCHHRLNR
Trigger: TCTGTTCAGTCTGTGGTGACAACATCGGAGCTGTCAACGATGACCGTGTCGCAGTCCCTGGAGGTGCCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 72 bp TGGGGCAGCCATGGCTGGCGGCTCCAGAATGCTCTCTaGCAGCACTGGAGTAGTTACTGCTGGAACCAACAA +
Preference number: 6 (lower is better)
Translates to: WGSHGWRLQNAL*QHWSSYCWNQQ
Trigger: TTGTTGGTTCCAGCAGTAACTACTCCAGTGCTGGCAGAGAGCATTCTGGAGCCGCCAGCCATGGCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CCA 72 bp CTCTGGTGGTTCCTCAGGAGGCAATGGTGGTGTCATTaGTGGCTCCTCAGGTGGCAACGGTGGCATTGTTGG +
Preference number: 6 (lower is better)
Translates to: LWWFLRRQWWCH*WLLRWQRWHCW
Trigger: CCAACAATGCCACCGTTGCCACCTGAGGAGCCACCAATGACACCACCATTGCCTCCTGAGGAACCACCAGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CAA 72 bp TCGAGGGCACCTCCAGGGACTGCGACACGGTCATCGTaGACAGCTCCGATGTTGTCACCACAGACTGAACAG +
Preference number: 6 (lower is better)
Translates to: SRAPPGTATRSS*TAPMLSPQTEQ
Trigger: CTGTTCAGTCTGTGGTGACAACATCGGAGCTGTCAACGATGACCGTGTCGCAGTCCCTGGAGGTGCCCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CAA 90 bp CGTTGTCATCCCCACAGGCTGCTCCAACTCTGTCGTCGTCACAGGTaGTTCGGTCAACTCCATTGCTACTGTTACCGCAGGCTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: RCHPHRLLQLCRRHR*FGQLHCYCYRRLLW
Trigger: CCAGAGCAGCCTGCGGTAACAGTAGCAATGGAGTTGACCGAACAACCTGTGACGACGACAGAGTTGGAGCAGCCTGTGGGGATGACAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CCA 72 bp GGTCAACTCCATTGCTACTGTTACCGCAGGCTGCTCTaGCAACTCTACTGCTGCTGTCACCAAAGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: GQLHCYCYRRLL*QLYCCCHQRQP
Trigger: GGGCTGCCTTTGGTGACAGCAGCAGTAGAGTTGCCAGAGCAGCCTGCGGTAACAGTAGCAATGGAGTTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CAA 72 bp CCCCACAGGCTGCTCCAACTCTGTCGTCGTCACAGGTaGTTCGGTCAACTCCATTGCTACTGTTACCGCAGG +
Preference number: 6 (lower is better)
Translates to: PHRLLQLCRRHR*FGQLHCYCYRR
Trigger: CCTGCGGTAACAGTAGCAATGGAGTTGACCGAACAACCTGTGACGACGACAGAGTTGGAGCAGCCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CAA 90 bp GCTGCTCCAACTCTGTCGTCGTCACAGGTTGTTCGGTCAACTCCATaGCTACTGTTACCGCAGGCTGCTCTGGCAACTCTACTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: AAPTLSSSQVVRSTP*LLLPQAALATLLLL
Trigger: CAGCAGCAGTAGAGTTGCCAGAGCAGCCTGCGGTAACAGTAGCAATGGAGTTGACCGAACAACCTGTGACGACGACAGAGTTGGAGCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS TCA 72 bp AGGCAGCTCCGGCAACTCCTGCGGTCTTGTCATGGATaGATCTGCAATCTCCGATGGTACGTCTACAGGCTG +
Preference number: 6 (lower is better)
Translates to: RQLRQLLRSCHG*ICNLRWYVYRL
Trigger: CAGCCTGTAGACGTACCATCGGAGATTGCAGATTCATCCATGACAAGACCGCAGGAGTTGCCGGAGCTGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS TCA 72 bp GTCATCGTTGACAGCTCCGATGTTGTCACCACAGACTaGACAGAGATCTCCAGCGCCACAGTTGCCACAGGC +
Preference number: 6 (lower is better)
Translates to: VIVDSSDVVTTD*TEISSATVATG
Trigger: GCCTGTGGCAACTGTGGCGCTGGAGATCTCTGTTCAGTCTGTGGTGACAACATCGGAGCTGTCAACGATGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS TCA 72 bp ACTAGGGCCTCCCAACCACTTGCTGTAACCAGCAGCTaGCAACCAAAAGGTCCTGGGGCTACAGGTCACAAG +
Preference number: 6 (lower is better)
Translates to: TRASQPLAVTSS*QPKGPGATGHK
Trigger: CTTGTGACCTGTAGCCCCAGGACCTTTTGGTTGTCAGCTGCTGGTTACAGCAAGTGGTTGGGAGGCCCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429093.6
CDS CCA 72 bp CGCAGAAACAACTGGCACAGGAATGGTAACATAGTCTaGCTCAGCCACAACAGGAGGCTCCGGGACAGTCAC +
Preference number: 6 (lower is better)
Translates to: RRNNWHRNGNIV*LSHNRRLRDSH
Trigger: GTGACTGTCCCGGAGCCTCCTGTTGTGGCTGAGCCAGACTATGTTACCATTCCTGTGCCAGTTGTTTCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS GCA 72 bp TCCAACGCTGTGGTCTTAGGCAGCTCCGGCAACTCCTaGGGTCTTGTCATGGATGAATCTGCAATCTCCGAT +
Preference number: 6 (lower is better)
Translates to: SNAVVLGSSGNS*GLVMDESAISD
Trigger: ATCGGAGATTGCAGATTCATCCATGACAAGACCGCAGGAGTTGCCGGAGCTGCCTAAGACCACAGCGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CAA 90 bp TCCCGGAATTTACTGACCACGAAAGACCTAAAAATCTGCTCGATGTaGGTCGCCATGGCGTCCGCTCCGTTCTCTCAACTCCTCCTCGCT +
Preference number: 6 (lower is better)
Translates to: SRNLLTTKDLKICSM*VAMASAPFSQLLLA
Trigger: AGCGAGGAGGAGTTGAGAGAACGGAGCGGACGCCATGGCGACCAACATCGAGCAGATTTTTAGGTCTTTCGTGGTCAGTAAATTCCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356577.10
ENST00000381692.6
ENST00000475072.1
CDS GCA 72 bp TCCCGGAATTTACTGACCACGAAAGACCTAAAAATCTaGTCGATGTTGGTCGCCATGGCGTCCGCTCCGTTC +
Preference number: 6 (lower is better)
Translates to: SRNLLTTKDLKI*SMLVAMASAPF
Trigger: GAACGGAGCGGACGCCATGGCGACCAACATCGAGCAGATTTTTAGGTCTTTCGTGGTCAGTAAATTCCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000381692.6
ENST00000455528.5
ENST00000475072.1
ENST00000492229.1
CDS CAA 90 bp CAGAGGCAGCTGCATCACCCGCCTGGTTTCCTTCAATGGGTGTATTaGTTTCACCATTCAGCTGGCCTTCATTCCTTCCACTGGAAAGCT +
Preference number: 6 (lower is better)
Translates to: QRQLHHPPGFLQWVY*FHHSAGLHSFHWKA
Trigger: AGCTTTCCAGTGGAAGGAATGAAGGCCAGCTGAATGGTGAAACAAATACACCCATTGAAGGAAACCAGGCGGGTGATGCAGCTGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000381692.6
ENST00000455528.5
ENST00000475072.1
ENST00000492229.1
CDS GCA 72 bp TCTGTAGGCCAAGTATTTTCAGCTGTTAATGCTGACTaGTCAGTGGGCAATGCTGGACCCTCTGGTGGTTCC +
Preference number: 6 (lower is better)
Translates to: SVGQVFSAVNAD*SVGNAGPSGGS
Trigger: GGAACCACCAGAGGGTCCAGCATTGCCCACTGAGCAGTCAGCATTAACAGCTGAAAATACTTGGCCTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CCA 72 bp CGGTGGCATTGTTGGGGGCTCTTCAGGAGGCAAAGGTaGCACCATATATGCCTCTGTATATGTGTCAGTGTA +
Preference number: 6 (lower is better)
Translates to: RWHCWGLFRRQR*HHICLCICVSV
Trigger: TACACTGACACATATACAGAGGCATATATGGTGCCACCTTTGCCTCCTGAAGAGCCCCCAACAATGCCACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CAA 72 bp TTACTGACCACGAAAGACCTAAAAATCTGCTCGATGTaGGTCGCCATGGCGTCCGCTCCGTTCTCTCAACTC +
Preference number: 6 (lower is better)
Translates to: LLTTKDLKICSM*VAMASAPFSQL
Trigger: GAGTTGAGAGAACGGAGCGGACGCCATGGCGACCAACATCGAGCAGATTTTTAGGTCTTTCGTGGTCAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000381692.6
ENST00000455528.5
ENST00000475072.1
CDS CAA 72 bp GGACTACCTTCCCACAAGTGCAGGGAGGGCCCAATGTaGGGTAGGGATGTGATAACACTGTTCTCTGCAATT +
Preference number: 6 (lower is better)
Translates to: GLPSHKCREGPM*GRDVITLFSAI
Trigger: AATTGCAGAGAACAGTGTTATCACATCCCTACCCAACATTGGGCCCTCCCTGCACTTGTGGGAAGGTAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS CAA 72 bp GCCTTGAAGCAAATCGGGAAGCTAAATAGTTGTACCTaGGACTACCTTCCCACAAGTGCAGGGAGGGCCCAA +
Preference number: 6 (lower is better)
Translates to: ALKQIGKLNSCT*DYLPTSAGRAQ
Trigger: TTGGGCCCTCCCTGCACTTGTGGGAAGGTAGTCCAAGGTACAACTATTTAGCTTCCCGATTTGCTTCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS TCA 72 bp GCTCTAACACTTTTGCTACTGGGGGCTCTACCAACATaGTCTTTGATGGCTCTGGAGATGTGCTCTCCACAG +
Preference number: 6 (lower is better)
Translates to: ALTLLLLGALPT*SLMALEMCSPQ
Trigger: CTGTGGAGAGCACATCTCCAGAGCCATCAAAGATCATGTTGGTAGAGCCCCCAGTAGCAAAAGTGTTAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS TCA 72 bp GGTGTGGACTCTATAGCCACCTCAGTTGGTATTACTTaGGTCTGCTCTGAGACTGTGACAGCAGGCTCTGAA +
Preference number: 6 (lower is better)
Translates to: GVDSIATSVGIT*VCSETVTAGSE
Trigger: TTCAGAGCCTGCTGTCACAGTCTCAGAGCAGACTCAAGTAATACCAACTGAGGTGGCTATAGAGTCCACACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CCA 72 bp GAGGCTCTGATGCTAACACAGTTGGTTCAGCTGACATaGCGGGAGTTTCAGATACCATACAAGTCACTGGTC +
Preference number: 6 (lower is better)
Translates to: EALMLTQLVQLT*REFQIPYKSLV
Trigger: GACCAGTGACTTGTATGGTATCTGAAACTCCCGCCATGTCAGCTGAACCAACTGTGTTAGCATCAGAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CCA 72 bp CTGAAGCTCTTTCTGGCATACTACTTACAACCGGGCTaGCAGCAGATCTGTCACGTCCAACATCACTTGCAA +
Preference number: 6 (lower is better)
Translates to: LKLFLAYYLQPG*QQICHVQHHLQ
Trigger: TTGCAAGTGATGTTGGACGTGACAGATCTGCTGCCAGCCCGGTTGTAAGTAGTATGCCAGAAAGAGCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CAA 72 bp ATTGCATCGAGTTACTGTCAAATGAGAAGCTGCGGGTaGTTTCATCTGTCGTCTAACCCGGCCCTGCCGTTT +
Preference number: 6 (lower is better)
Translates to: IASSYCQMRSCG*FHLSSNPALPF
Trigger: AAACGGCAGGGCCGGGTTAGACGACAGATGAAACAACCCGCAGCTTCTCATTTGACAGTAACTCGATGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS CAA 90 bp TTGTACCTTGGACTACCTTCCCACAAGTGCAGGGAGGGCCCAATGTaGGGTAGGGATGTGATAACACTGTTCTCTGCAATTCGATGCTTT +
Preference number: 6 (lower is better)
Translates to: LYLGLPSHKCREGPM*GRDVITLFSAIRCF
Trigger: AAAGCATCGAATTGCAGAGAACAGTGTTATCACATCCCTACCCAACATTGGGCCCTCCCTGCACTTGTGGGAAGGTAGTCCAAGGTACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS CAA 90 bp AGCTATAGAGCCTTGAAGCAAATCGGGAAGCTAAATAGTTGTACCTaGGACTACCTTCCCACAAGTGCAGGGAGGGCCCAATGTTGGGTA +
Preference number: 6 (lower is better)
Translates to: SYRALKQIGKLNSCT*DYLPTSAGRAQCWV
Trigger: TACCCAACATTGGGCCCTCCCTGCACTTGTGGGAAGGTAGTCCAAGGTACAACTATTTAGCTTCCCGATTTGCTTCAAGGCTCTATAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS TCA 72 bp CACTTTTGCTACTGGGGGCTCTACCAACATGATCTTTaGTGGCTCTGGAGATGTGCTCTCCACAGATTTCAG +
Preference number: 6 (lower is better)
Translates to: HFCYWGLYQHDL*WLWRCALHRFQ
Trigger: CTGAAATCTGTGGAGAGCACATCTCCAGAGCCATCAAAGATCATGTTGGTAGAGCCCCCAGTAGCAAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 72 bp GATGAATCTGCAATCTCCGATGGTACGTCTACAGGCTaGTCTGGCAATCTTAGCGCTTCAATTGCAGATGAC +
Preference number: 6 (lower is better)
Translates to: DESAISDGTSTG*SGNLSASIADD
Trigger: GTCATCTGCAATTGAAGCGCTAAGATTGCCAGAGCAGCCTGTAGACGTACCATCGGAGATTGCAGATTCATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS GCA 72 bp TTCAGGTGTTCCTCAGCATGTGGTTCTTCACCTGAATaGAATGCAATCTCCTGCATGCCAATCTCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: FRCSSACGSSPE*NAISCMPISGA
Trigger: TGCTCCAGAGATTGGCATGCAGGAGATTGCATTGCATTCAGGTGAAGAACCACATGCTGAGGAACACCTGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS GCA 72 bp CTTCAACACCAGTGTTGTAGTAGGCACTGGTGCTGCTaGAAAGGAATCCAGAATCTTTGTCATGGATGGTTC +
Preference number: 6 (lower is better)
Translates to: LQHQCCSRHWCC*KGIQNLCHGWF
Trigger: GAACCATCCATGACAAAGATTCTGGATTCCTTTGCAGCAGCACCAGTGCCTACTACAACACTGGTGTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS TCA 72 bp TCTTGCCCTAGAACGAGATTCACTGGTACGCTTGCGTaGTTTGTGTTCAGAAGATTTGGAACGCTTACTTCG +
Preference number: 6 (lower is better)
Translates to: SCPRTRFTGTLA*FVFRRFGTLTS
Trigger: CGAAGTAAGCGTTCCAAATCTTCTGAACACAAATCACGCAAGCGTACCAGTGAATCTCGTTCTAGGGCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS GCA 72 bp GATGGTTCTGGCATTACTGCCACAGACTGCTCTGACTaGTCTGAGATTACTGATGTAGATACAACTGACAGT +
Preference number: 6 (lower is better)
Translates to: DGSGITATDCSD*SEITDVDTTDS
Trigger: ACTGTCAGTTGTATCTACATCAGTAATCTCAGAGCAGTCAGAGCAGTCTGTGGCAGTAATGCCAGAACCATC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CAA 72 bp TTAGCGCTTCAATTGCAGATGACTCTGGAAAATCCATaGTTGTTGATGTGCTTGGCTCAGGGTACACCTCAG +
Preference number: 6 (lower is better)
Translates to: LALQLQMTLENP*LLMCLAQGTPQ
Trigger: CTGAGGTGTACCCTGAGCCAAGCACATCAACAACAATGGATTTTCCAGAGTCATCTGCAATTGAAGCGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS CAA 72 bp GCCCTAGAACGAGATTCACTGGTACGCTTGCGTGATTaGTGTTCAGAAGATTTGGAACGCTTACTTCGAGAT +
Preference number: 6 (lower is better)
Translates to: ALERDSLVRLRD*CSEDLERLLRD
Trigger: ATCTCGAAGTAAGCGTTCCAAATCTTCTGAACACAAATCACGCAAGCGTACCAGTGAATCTCGTTCTAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CAA 90 bp CCAGGGAACACGCATCTTCGTAGCACGAGGCGTCCATTCTCTCCCTaGATTTTAGGTCTTACATATCTGTTTTGTCATGAAATTAGTGGT +
Preference number: 6 (lower is better)
Translates to: PGNTHLRSTRRPFSP*ILGLTYLFCHEISG
Trigger: ACCACTAATTTCATGACAAAACAGATATGTAAGACCTAAAATCAAGGGAGAGAATGGACGCCTCGTGCTACGAAGATGCGTGTTCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467616.5
CDS TCA 72 bp GATGTGCTCTCCACAGATTTCAGCACAGACTTCATCTaGTACTCCACTGACATTGTTACAACTGGCTCAGAT +
Preference number: 6 (lower is better)
Translates to: DVLSTDFSTDFI*YSTDIVTTGSD
Trigger: ATCTGAGCCAGTTGTAACAATGTCAGTGGAGTATCAGATGAAGTCTGTGCTGAAATCTGTGGAGAGCACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5
CDS TCA 72 bp GTTCCACAAAGTGAATTGCATCGAGTTACTGTCAAATaGGAAGCTGCGGGTTGTTTCATCTGTCGTCTAACC +
Preference number: 6 (lower is better)
Translates to: VPQSELHRVTVK*EAAGCFICRLT
Trigger: GGTTAGACGACAGATGAAACAACCCGCAGCTTCTCATTTGACAGTAACTCGATGCAATTCACTTTGTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS TCA 72 bp GGATTTGGCCCTGAAACAAGTTTCCATACAGAGGGGTaGAAGTTCACAGGTTATTCTGTGAACAGTCATCTC +
Preference number: 6 (lower is better)
Translates to: GFGPETSFHTEG*KFTGYSVNSHL
Trigger: GAGATGACTGTTCACAGAATAACCTGTGAACTTTCACCCCTCTGTATGGAAACTTGTTTCAGGGCCAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478183.5
CDS GCA 72 bp GCTTTTCACTTTGTGGCTTGGTTCCACAAAGTGAATTaGATCGAGTTACTGTCAAATGAGAAGCTGCGGGTT +
Preference number: 6 (lower is better)
Translates to: AFHFVAWFHKVN*IELLSNEKLRV
Trigger: AACCCGCAGCTTCTCATTTGACAGTAACTCGATGCAATTCACTTTGTGGAACCAAGCCACAAAGTGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS CAA 72 bp CTCTTTCTTGCCCTAGAACGAGATTCACTGGTACGCTaGCGTGATTTGTGTTCAGAAGATTTGGAACGCTTA +
Preference number: 6 (lower is better)
Translates to: LFLALERDSLVR*RDLCSEDLERL
Trigger: TAAGCGTTCCAAATCTTCTGAACACAAATCACGCAAGCGTACCAGTGAATCTCGTTCTAGGGCAAGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS TCA 72 bp TGCTTCATTAATATCCTCAATATTGGCAGAAAATCCTaGATCAGGCAGTGTCTCTTTAGGAGGGGGAGGTAC +
Preference number: 6 (lower is better)
Translates to: CFINILNIGRKS*IRQCLFRRGRY
Trigger: GTACCTCCCCCTCCTAAAGAGACACTGCCTGATTCAGGATTTTCTGCCAATATTGAGGATATTAATGAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS GCA 72 bp GGTAGGGATGTGATAACACTGTTCTCTGCAATTCGATaGTTTTCACTTTGTGGCTTGGTTCCACAAAGTGAA +
Preference number: 6 (lower is better)
Translates to: GRDVITLFSAIR*FSLCGLVPQSE
Trigger: TTCACTTTGTGGAACCAAGCCACAAAGTGAAAAGCATCGAATTGCAGAGAACAGTGTTATCACATCCCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300278.8
CDS CCA 72 bp CTACTTTCTTTAGGGCTGAGCAGAGCTGCTAATGTCTaGTCACTCTCTTTTACAGGTAATGGTTCTTCTGTA +
Preference number: 6 (lower is better)
Translates to: LLSLGLSRAANV*SLSFTGNGSSV
Trigger: TACAGAAGAACCATTACCTGTAAAAGAGAGTGACCAGACATTAGCAGCTCTGCTCAGCCCTAAAGAAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CCA 72 bp CACTGGTACGCTTGCGTGATTTGTGTTCAGAAGATTTaGAACGCTTACTTCGAGATCTTAATGAAGAGTCTC +
Preference number: 6 (lower is better)
Translates to: HWYACVICVQKI*NAYFEILMKSL
Trigger: GAGACTCTTCATTAAGATCTCGAAGTAAGCGTTCCAAATCTTCTGAACACAAATCACGCAAGCGTACCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CAA 90 bp GGAAGTAACGGTCTCACTAAATCTGCTTCATTAATATCCTCAATATaGGCAGAAAATCCTGAATCAGGCAGTGTCTCTTTAGGAGGGGGA +
Preference number: 6 (lower is better)
Translates to: GSNGLTKSASLISSI*AENPESGSVSLGGG
Trigger: TCCCCCTCCTAAAGAGACACTGCCTGATTCAGGATTTTCTGCCAATATTGAGGATATTAATGAAGCAGATTTAGTGAGACCGTTACTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CAA 90 bp CTCTTTCTTGCCCTAGAACGAGATTCACTGGTACGCTTGCGTGATTaGTGTTCAGAAGATTTGGAACGCTTACTTCGAGATCTTAATGAA +
Preference number: 6 (lower is better)
Translates to: LFLALERDSLVRLRD*CSEDLERLLRDLNE
Trigger: TTCATTAAGATCTCGAAGTAAGCGTTCCAAATCTTCTGAACACAAATCACGCAAGCGTACCAGTGAATCTCGTTCTAGGGCAAGAAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CAA 90 bp TTAGATGATCTCTTTCTTGCCCTAGAACGAGATTCACTGGTACGCTaGCGTGATTTGTGTTCAGAAGATTTGGAACGCTTACTTCGAGAT +
Preference number: 6 (lower is better)
Translates to: LDDLFLALERDSLVR*RDLCSEDLERLLRD
Trigger: ATCTCGAAGTAAGCGTTCCAAATCTTCTGAACACAAATCACGCAAGCGTACCAGTGAATCTCGTTCTAGGGCAAGAAAGAGATCATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS CAA 90 bp GAACGAGATTCACTGGTACGCTTGCGTGATTTGTGTTCAGAAGATTaGGAACGCTTACTTCGAGATCTTAATGAAGAGTCTCTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: ERDSLVRLRDLCSED*ERLLRDLNEESLFF
Trigger: GAAGAAAAGAGACTCTTCATTAAGATCTCGAAGTAAGCGTTCCAAATCTTCTGAACACAAATCACGCAAGCGTACCAGTGAATCTCGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS TCA 72 bp GCAATCTCCTGCATGCCAATCTCTGGAGCAAGATTTTaGTCACCAGAGGATAGATTAATTCCTTTCATAACA +
Preference number: 6 (lower is better)
Translates to: AISCMPISGARF*SPEDRLIPFIT
Trigger: TGTTATGAAAGGAATTAATCTATCCTCTGGTGATCAAAATCTTGCTCCAGAGATTGGCATGCAGGAGATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS TCA 72 bp TTCTGTGAACAGTCATCTCTCTTGTATCCAACCCACTaGACCATAATTTCCATCAAAGCAGCAAACCACTTA +
Preference number: 6 (lower is better)
Translates to: FCEQSSLLYPTH*TIISIKAANHL
Trigger: TAAGTGGTTTGCTGCTTTGATGGAAATTATGGTTCAGTGGGTTGGATACAAGAGAGATGACTGTTCACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478183.5
CDS CAA 90 bp TTTCTTTTTCTTTCCCTAGACTTGGATCTGTGCTTTGGAGATCTTTaGCGCTTCTCTTTTGATACAGATCTTCTTCCTCTAGACTTTGAT +
Preference number: 6 (lower is better)
Translates to: FLFLSLDLDLCFGDL*RFSFDTDLLPLDFD
Trigger: ATCAAAGTCTAGAGGAAGAAGATCTGTATCAAAAGAGAAGCGCAAAAGATCTCCAAAGCACAGATCCAAGTCTAGGGAAAGAAAAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000436227.5
ENST00000455528.5
CDS TCA 72 bp AAGGAATCAGATTCTAAATCTATGTTCCCATCATCATaGGATTTCGTCTTTGACTCAGATTCTTCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: KESDSKSMFPSS*DFVFDSDSSGC
Trigger: ACAGCCAGAAGAATCTGAGTCAAAGACGAAATCTCATGATGATGGGAACATAGATTTAGAATCTGATTCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300278.8
ENST00000356577.10
ENST00000381679.8
ENST00000455528.5