RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SOGA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000214338

Ensembl transcript IDs: ENST00000465909.2, ENST00000467753.1, ENST00000525778.5

Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CGGACTCTAGCTCCCGAGGCGGCTCCTCGGGCGGTCCGGGCCTCCTaGCGCCCAAAGCGGCCAGGGTCGCGGCGGGGGCCGCTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: RTLAPEAAPRAVRAS*RPKRPGSRRGPLQH
Trigger: GTGCTGAAGCGGCCCCCGCCGCGACCCTGGCCGCTTTGGGCGGCAGGAGGCCCGGACCGCCCGAGGAGCCGCCTCGGGAGCTAGAGTCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CCA 90 bp GCTGCCCTCTGCGCTCTGCTGGGGGCCCTCCGCCGCCGCCGCCATTaGGGAGGCGGAGGCGACGGCCAGGGTCTCGCAAACGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: AALCALLGALRRRRH*GGGGDGQGLANGRG
Trigger: CCCCCTGCCGTTTGCGAGACCCTGGCCGTCGCCTCCGCCTCCCCAATGGCGGCGGCGGCGGAGGGCCCCCAGCAGAGCGCAGAGGGCAGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 90 bp CTGCTCTTGGAGCTGCTGCGGGTGCGGCTGCGACGAAGGGGGCGCTaGCGCCTGCATGCCCCCGCCGCTCGCGCTGCCCTCTGCGCTCTG +
Preference number: 5 (lower is better)
Translates to: LLLELLRVRLRRRGR*RLHAPAARAALCAL
Trigger: CAGAGCGCAGAGGGCAGCGCGAGCGGCGGGGGCATGCAGGCGGCAGCGCCCCCTTCGTCGCAGCCGCACCCGCAGCAGCTCCAAGAGCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 90 bp GGGGAGCTGCGGCTACTGCTGCCGCCGCCGTTCTTAGCGTGCATCTaGGCCGCGGCCGCCGCCGCTGCCGCCCGCTCCTTCTTGAGATGG +
Preference number: 5 (lower is better)
Translates to: GELRLLLPPPFLACI*AAAAAAAARSFLRW
Trigger: CCATCTCAAGAAGGAGCGGGCGGCAGCGGCGGCGGCCGCGGCTCAGATGCACGCTAAGAACGGCGGCGGCAGCAGTAGCCGCAGCTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 90 bp TCTTGGGCCAGGGCCCGGGCGCCGGGTAGAAGGAGCGAGTGGGCGTaGGGCAGCGGATGTTGCGCACCTCCTCCGAGTCGCTCTCGCCGC +
Preference number: 5 (lower is better)
Translates to: SWARARAPGRRSEWA*GSGCCAPPPSRSRR
Trigger: GCGGCGAGAGCGACTCGGAGGAGGTGCGCAACATCCGCTGCCTCACGCCCACTCGCTCCTTCTACCCGGCGCCCGGGCCCTGGCCCAAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 90 bp CTGCTTTCTGCTGCTGCCCTCCGGGTGCAGACGAGCCTCAGTGGCTaGAGCGGCGGGAGAAGCTGCTGCTGTGGCAGGGGCAGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: LLSAAALRVQTSLSG*SGGRSCCCGRGSAP
Trigger: GGGGGCGCTGCCCCTGCCACAGCAGCAGCTTCTCCCGCCGCTGCAGCCACTGAGGCTCGTCTGCACCCGGAGGGCAGCAGCAGAAAGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 90 bp TCTCGGCCCCACCTCCGCCTCCTCGGATGCTGGCGGGCGGCCCCGTaGGGCTCCCGGTCTTGTTACCCTGCTGTTGCTGCTGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: SRPHLRLLGCWRAAP*GSRSCYPAVAAAAA
Trigger: AGCTGCAGCAGCAGCAACAGCAGGGTAACAAGACCGGGAGCCGCACGGGGCCGCCCGCCAGCATCCGAGGAGGCGGAGGTGGGGCCGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 90 bp ATGGTCTTGCCCAGGCGCTCGGCCTCCGAGCGGATGTCCTTCATCTaGTGCCGATCGGAGAAGCTCTTGGGCCAGGGCCCGGGCGCCGGG +
Preference number: 5 (lower is better)
Translates to: MVLPRRSASERMSFI*CRSEKLLGQGPGAG
Trigger: CCCGGCGCCCGGGCCCTGGCCCAAGAGCTTCTCCGATCGGCAGCAGATGAAGGACATCCGCTCGGAGGCCGAGCGCCTGGGCAAGACCAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CCA 90 bp GCTGCTGCTTTCTGCTGCTGCCCTCCGGGTGCAGACGAGCCTCAGTaGCTGCAGCGGCGGGAGAAGCTGCTGCTGTGGCAGGGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: AAAFCCCPPGADEPQ*LQRREKLLLWQGQR
Trigger: GCGCTGCCCCTGCCACAGCAGCAGCTTCTCCCGCCGCTGCAGCCACTGAGGCTCGTCTGCACCCGGAGGGCAGCAGCAGAAAGCAGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 90 bp GCAGCTCGTGCTCCCGGATGCGGCTGCCGTCGTCCTCCTCGTCCATaGGTCCGAACAGGTCCCCGTTGGCCACGTAGATGCGCGCCTCGG +
Preference number: 5 (lower is better)
Translates to: AARAPGCGCRRPPRP*VRTGPRWPRRCAPR
Trigger: CCGAGGCGCGCATCTACGTGGCCAACGGGGACCTGTTCGGACTCATGGACGAGGAGGACGACGGCAGCCGCATCCGGGAGCACGAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 90 bp CTCCGGGTGCAGACGAGCCTCAGTGGCTGCAGCGGCGGGAGAAGCTaGTGCTGTGGCAGGGGCAGCGCCCCCGATTGGTGGCTGACTCAT +
Preference number: 5 (lower is better)
Translates to: LRVQTSLSGCSGGRS*CCGRGSAPDWWLTH
Trigger: ATGAGTCAGCCACCAATCGGGGGCGCTGCCCCTGCCACAGCAGCAGCTTCTCCCGCCGCTGCAGCCACTGAGGCTCGTCTGCACCCGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CCA 90 bp GCCGCCTTCAGCTCCTCCTGCAGGGCCTCGGTCTTGGCGTTGTCGTaGTGCCGCGCGCTGTCGTGGCCGCCGGACTTGTACTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: AAFSSSCRASVLALS*CRALSWPPDLYLYL
Trigger: CAAGTACAAGTACAAGTCCGGCGGCCACGACAGCGCGCGGCACCACGACAACGCCAAGACCGAGGCCCTGCAGGAGGAGCTGAAGGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 90 bp GGCCGCGATTGTCTGTCGCAGCGAACTGTCCCTCGGTCTAGCGGGTaGCTGAGCTCGCTGCTGCTTTCTGCTGCTGCCCTCCGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: GRDCLSQRTVPRSSG*LSSLLLSAAALRVQ
Trigger: CTGCACCCGGAGGGCAGCAGCAGAAAGCAGCAGCGAGCTCAGTCACCCGCTAGACCGAGGGACAGTTCGCTGCGACAGACAATCGCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 90 bp CGGATGCTGGCGGGCGGCCCCGTGCGGCTCCCGGTCTTGTTACCCTaGTGTTGCTGCTGCTGCAGCTGCTGCTGCCGAACAGAATTGAGT +
Preference number: 5 (lower is better)
Translates to: RMLAGGPVRLPVLLP*CCCCCSCCCRTELS
Trigger: ACTCAATTCTGTTCGGCAGCAGCAGCTGCAGCAGCAGCAACAGCAGGGTAACAAGACCGGGAGCCGCACGGGGCCGCCCGCCAGCATCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 90 bp TCCACCAGCTGCAGGTGCTGCCGCAGCTCCGACAGGGATTCGCTCTaGTCCCTCATGAGCGGGTTGGCCGAGCCGTTGAAGTCATCGCCC +
Preference number: 5 (lower is better)
Translates to: STSCRCCRSSDRDSL*SLMSGLAEPLKSSP
Trigger: GGGCGATGACTTCAACGGCTCGGCCAACCCGCTCATGAGGGAGCAGAGCGAATCCCTGTCGGAGCTGCGGCAGCACCTGCAGCTGGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 90 bp GGCCCCGTGCGGCTCCCGGTCTTGTTACCCTGCTGTTGCTGCTGCTaGAGCTGCTGCTGCCGAACAGAATTGAGTTTAGTGCCGGCCCCC +
Preference number: 5 (lower is better)
Translates to: GPVRLPVLLPCCCCC*SCCCRTELSLVPAP
Trigger: GGGGGCCGGCACTAAACTCAATTCTGTTCGGCAGCAGCAGCTGCAGCAGCAGCAACAGCAGGGTAACAAGACCGGGAGCCGCACGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 90 bp GCCTTCAGCTCCTCCTGCAGGGCCTCGGTCTTGGCGTTGTCGTGGTaGCGCGCGCTGTCGTGGCCGCCGGACTTGTACTTGTACTTGTTG +
Preference number: 5 (lower is better)
Translates to: AFSSSCRASVLALSW*RALSWPPDLYLYLL
Trigger: CAACAAGTACAAGTACAAGTCCGGCGGCCACGACAGCGCGCGGCACCACGACAACGCCAAGACCGAGGCCCTGCAGGAGGAGCTGAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 90 bp GCGATTGTCTGTCGCAGCGAACTGTCCCTCGGTCTAGCGGGTGACTaGGCTCGCTGCTGCTTTCTGCTGCTGCCCTCCGGGTGCAGACGA +
Preference number: 5 (lower is better)
Translates to: AIVCRSELSLGLAGD*ARCCFLLLPSGCRR
Trigger: TCGTCTGCACCCGGAGGGCAGCAGCAGAAAGCAGCAGCGAGCTCAGTCACCCGCTAGACCGAGGGACAGTTCGCTGCGACAGACAATCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 90 bp CTGGCGGGCGGCCCCGTGCGGCTCCCGGTCTTGTTACCCTGCTGTTaGTGCTGCTGCAGCTGCTGCTGCCGAACAGAATTGAGTTTAGTG +
Preference number: 5 (lower is better)
Translates to: LAGGPVRLPVLLPCC*CCCSCCCRTELSLV
Trigger: CACTAAACTCAATTCTGTTCGGCAGCAGCAGCTGCAGCAGCAGCAACAGCAGGGTAACAAGACCGGGAGCCGCACGGGGCCGCCCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CCA 90 bp CAGCTGCTGCTGCCGAACAGAATTGAGTTTAGTGCCGGCCCCCACTaGGGACCGGGTGGCCGCGATTGTCTGTCGCAGCGAACTGTCCCT +
Preference number: 5 (lower is better)
Translates to: QLLLPNRIEFSAGPH*GPGGRDCLSQRTVP
Trigger: AGGGACAGTTCGCTGCGACAGACAATCGCGGCCACCCGGTCCCCAGTGGGGGCCGGCACTAAACTCAATTCTGTTCGGCAGCAGCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 90 bp CTCCCGGTCTTGTTACCCTGCTGTTGCTGCTGCTGCAGCTGCTGCTaGCGAACAGAATTGAGTTTAGTGCCGGCCCCCACTGGGGACCGG +
Preference number: 5 (lower is better)
Translates to: LPVLLPCCCCCCSCC*RTELSLVPAPTGDR
Trigger: CCGGTCCCCAGTGGGGGCCGGCACTAAACTCAATTCTGTTCGGCAGCAGCAGCTGCAGCAGCAGCAACAGCAGGGTAACAAGACCGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CCA 90 bp GGCGGGAGAAGCTGCTGCTGTGGCAGGGGCAGCGCCCCCGATTGGTaGCTGACTCATGGCTATGAACCTACCAGATGCGATTTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: GGRSCCCGRGSAPDW*LTHGYEPTRCDLEE
Trigger: CTCTTCCAAATCGCATCTGGTAGGTTCATAGCCATGAGTCAGCCACCAATCGGGGGCGCTGCCCCTGCCACAGCAGCAGCTTCTCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CCA 90 bp AGCGGCGGGAGAAGCTGCTGCTGTGGCAGGGGCAGCGCCCCCGATTaGTGGCTGACTCATGGCTATGAACCTACCAGATGCGATTTGGAA +
Preference number: 5 (lower is better)
Translates to: SGGRSCCCGRGSAPD*WLTHGYEPTRCDLE
Trigger: TTCCAAATCGCATCTGGTAGGTTCATAGCCATGAGTCAGCCACCAATCGGGGGCGCTGCCCCTGCCACAGCAGCAGCTTCTCCCGCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 90 bp GGAGAAGCTGCTGCTGTGGCAGGGGCAGCGCCCCCGATTGGTGGCTaGCTCATGGCTATGAACCTACCAGATGCGATTTGGAAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: GEAAAVAGAAPPIGG*LMAMNLPDAIWKSP
Trigger: TGGGCTCTTCCAAATCGCATCTGGTAGGTTCATAGCCATGAGTCAGCCACCAATCGGGGGCGCTGCCCCTGCCACAGCAGCAGCTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 90 bp AGCTGGGCCAGACGCTCCCCAGGAAGTGCAGAGATGTTCATGAGCTaGCCTCACCGAACTGGGCAGGAGAGAAGGCGGGATTGCAAGGGA +
Preference number: 5 (lower is better)
Translates to: SWARRSPGSAEMFMS*PHRTGQERRRDCKG
Trigger: TCCCTTGCAATCCCGCCTTCTCTCCTGCCCAGTTCGGTGAGGTCAGCTCATGAACATCTCTGCACTTCCTGGGGAGCGTCTGGCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525778.5
CDS GCA 90 bp GCTAACACGCGAGGTACCAAGCTGGGCCAGACGCTCCCCAGGAAGTaGAGAGATGTTCATGAGCTGACCTCACCGAACTGGGCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: ANTRGTKLGQTLPRK*RDVHELTSPNWAGE
Trigger: CTCTCCTGCCCAGTTCGGTGAGGTCAGCTCATGAACATCTCTGCACTTCCTGGGGAGCGTCTGGCCCAGCTTGGTACCTCGCGTGTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525778.5
CDS GCA 90 bp GAGCCACGCCCGAGATGGAAGATTGGCAGCAGCGCTCAAACTCCTTaGTCTATTCTCTTATCCCGTACTTGGCAGAGGATCCCAAAACCG +
Preference number: 5 (lower is better)
Translates to: EPRPRWKIGSSAQTP*SILLSRTWQRIPKP
Trigger: CGGTTTTGGGATCCTCTGCCAAGTACGGGATAAGAGAATAGAGCAAGGAGTTTGAGCGCTGCTGCCAATCTTCCATCTCGGGCGTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525778.5
CDS TCA 90 bp CAGTTTTTGTTGGCTCTCTCCAACTCGTGGCGCATTTCCTGCAGTTaGCAGGCATCCTCCTCGAAGAAAGTGTCCCTCATCTCGTCCATC +
Preference number: 5 (lower is better)
Translates to: QFLLALSNSWRISCS*QASSSKKVSLISSI
Trigger: GATGGACGAGATGAGGGACACTTTCTTCGAGGAGGATGCCTGTCAACTGCAGGAAATGCGCCACGAGTTGGAGAGAGCCAACAAAAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 90 bp AGCGCCCCCGATTGGTGGCTGACTCATGGCTATGAACCTACCAGATaGGATTTGGAAGAGCCCATTACTAGATCATCCTCTTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: SAPDWWLTHGYEPTR*DLEEPITRSSSSLF
Trigger: GAAGAGGGAAGAGGATGATCTAGTAATGGGCTCTTCCAAATCGCATCTGGTAGGTTCATAGCCATGAGTCAGCCACCAATCGGGGGCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465909.2
ENST00000467753.1
ENST00000525778.5
CDS GCA 90 bp TTGTGCCTTTCTGCGCCGAGGAAAGTTCAACTTCATATTATTGTATaGGACTTTCCGGCTGAGCATGACTTTGGGCTCGCTCGCCGCAGT +
Preference number: 5 (lower is better)
Translates to: LCLSAPRKVQLHIIV*DFPAEHDFGLARRS
Trigger: ACTGCGGCGAGCGAGCCCAAAGTCATGCTCAGCCGGAAAGTCGCATACAATAATATGAAGTTGAACTTTCCTCGGCGCAGAAAGGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465909.2
ENST00000467753.1
ENST00000525778.5
CDS CCA 90 bp CCCATTTCCTCCTATATAGCAATTCTGAGACAGAACCCAGAAGGCTaGTGCATCTTCCCTCATGGTGGTAAGATCAATTTCCAGTATGTG +
Preference number: 5 (lower is better)
Translates to: PISSYIAILRQNPEG*CIFPHGGKINFQYV
Trigger: CACATACTGGAAATTGATCTTACCACCATGAGGGAAGATGCACCAGCCTTCTGGGTTCTGTCTCAGAATTGCTATATAGGAGGAAATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467753.1
CDS GCA 90 bp CCTTCTGATATTCCGGGGATCTCAGGGTTTATTATTGTGCCTTTCTaGGCCGAGGAAAGTTCAACTTCATATTATTGTATGCGACTTTCC +
Preference number: 5 (lower is better)
Translates to: PSDIPGISGFIIVPF*AEESSTSYYCMRLS
Trigger: GGAAAGTCGCATACAATAATATGAAGTTGAACTTTCCTCGGCGCAGAAAGGCACAATAATAAACCCTGAGATCCCCGGAATATCAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465909.2
ENST00000467753.1
ENST00000525778.5
CDS GCA 90 bp AGCACTTTCCTTCTGATATTCCGGGGATCTCAGGGTTTATTATTGTaGCTTTCTGCGCCGAGGAAAGTTCAACTTCATATTATTGTATGC +
Preference number: 5 (lower is better)
Translates to: STFLLIFRGSQGLLL*LSAPRKVQLHIIVC
Trigger: GCATACAATAATATGAAGTTGAACTTTCCTCGGCGCAGAAAGGCACAATAATAAACCCTGAGATCCCCGGAATATCAGAAGGAAAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465909.2
ENST00000467753.1
ENST00000525778.5
CDS TCA 90 bp TTTCCAGTTCATTCTGTAAAGCTTGCTTTGCAATTTCAACTTCTATaGGCTGTTGCCTCAGTTTCTCATTTTCATCTTCTGTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: FPVHSVKLALQFQLL*AVASVSHFHLLLLF
Trigger: GAACAACAACAGAAGATGAAAATGAGAAACTGAGGCAACAGCTCATAGAAGTTGAAATTGCAAAGCAAGCTTTACAGAATGAACTGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp GAGCTGCTGCGGGTGCGGCTGCGACGAAGGGGGCGCTaGCGCCTGCATGCCCCCGCCGCTCGCGCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: ELLRVRLRRRGR*RLHAPAARAAL
Trigger: GAGGGCAGCGCGAGCGGCGGGGGCATGCAGGCGGCAGCGCCCCCTTCGTCGCAGCCGCACCCGCAGCAGCTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp GCGTCGCCTTCTCGGCCCCACCTCCGCCTCCTCGGATaGTGGCGGGCGGCCCCGTGCGGCTCCCGGTCTTGT +
Preference number: 6 (lower is better)
Translates to: ASPSRPHLRLLG*WRAAPCGSRSC
Trigger: ACAAGACCGGGAGCCGCACGGGGCCGCCCGCCAGCATCCGAGGAGGCGGAGGTGGGGCCGAGAAGGCGACGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp TGCCCGCGTCGCTCTCGGCGTCGCTGTCGCGGGGGCTaGCGCGGATGCCCAGGTGCGAGGCCAGGTCGTAGC +
Preference number: 6 (lower is better)
Translates to: CPRRSRRRCRGG*RGCPGARPGRS
Trigger: GCTACGACCTGGCCTCGCACCTGGGCATCCGCGGCAGCCCCCGCGACAGCGACGCCGAGAGCGACGCGGGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 72 bp CGGCTACTGCTGCCGCCGCCGTTCTTAGCGTGCATCTaGGCCGCGGCCGCCGCCGCTGCCGCCCGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: RLLLPPPFLACI*AAAAAAAARSF
Trigger: GAAGGAGCGGGCGGCAGCGGCGGCGGCCGCGGCTCAGATGCACGCTAAGAACGGCGGCGGCAGCAGTAGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp CGGTGCGGAGGCCGCGAGTCGTCGTCGCTCTCCTTCTaGCCCGCGTCGCTCTCGGCGTCGCTGTCGCGGGGG +
Preference number: 6 (lower is better)
Translates to: RCGGRESSSLSF*PASLSASLSRG
Trigger: CCCCCGCGACAGCGACGCCGAGAGCGACGCGGGCAAGAAGGAGAGCGACGACGACTCGCGGCCTCCGCACCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp CCGAGTCGCTCTCGCCGCCGATGGGCCCTTCGCGCTTaGGGTGCGGAGGCCGCGAGTCGTCGTCGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: PSRSRRRWALRA*GAEAASRRRSP
Trigger: AGGAGAGCGACGACGACTCGCGGCCTCCGCACCGCAAGCGCGAAGGGCCCATCGGCGGCGAGAGCGACTCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CCA 72 bp TCGCCTTCTCGGCCCCACCTCCGCCTCCTCGGATGCTaGCGGGCGGCCCCGTGCGGCTCCCGGTCTTGTTAC +
Preference number: 6 (lower is better)
Translates to: SPSRPHLRLLGC*RAAPCGSRSCY
Trigger: GTAACAAGACCGGGAGCCGCACGGGGCCGCCCGCCAGCATCCGAGGAGGCGGAGGTGGGGCCGAGAAGGCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp TCCGAGTCGCTCTCGCCGCCGATGGGCCCTTCGCGCTaGCGGTGCGGAGGCCGCGAGTCGTCGTCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SESLSPPMGPSR*RCGGRESSSLS
Trigger: GGAGAGCGACGACGACTCGCGGCCTCCGCACCGCAAGCGCGAAGGGCCCATCGGCGGCGAGAGCGACTCGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 72 bp AGGGCCCGGGCGCCGGGTAGAAGGAGCGAGTGGGCGTaGGGCAGCGGATGTTGCGCACCTCCTCCGAGTCGC +
Preference number: 6 (lower is better)
Translates to: RARAPGRRSEWA*GSGCCAPPPSR
Trigger: GCGACTCGGAGGAGGTGCGCAACATCCGCTGCCTCACGCCCACTCGCTCCTTCTACCCGGCGCCCGGGCCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp GCCTTCAGCTCCTCCTGCAGGGCCTCGGTCTTGGCGTaGTCGTGGTGCCGCGCGCTGTCGTGGCCGCCGGAC +
Preference number: 6 (lower is better)
Translates to: AFSSSCRASVLA*SWCRALSWPPD
Trigger: GTCCGGCGGCCACGACAGCGCGCGGCACCACGACAACGCCAAGACCGAGGCCCTGCAGGAGGAGCTGAAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp CAGACGAGCCTCAGTGGCTGCAGCGGCGGGAGAAGCTaGTGCTGTGGCAGGGGCAGCGCCCCCGATTGGTGG +
Preference number: 6 (lower is better)
Translates to: QTSLSGCSGGRS*CCGRGSAPDWW
Trigger: CCACCAATCGGGGGCGCTGCCCCTGCCACAGCAGCAGCTTCTCCCGCCGCTGCAGCCACTGAGGCTCGTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp CACCTCCGCCTCCTCGGATGCTGGCGGGCGGCCCCGTaGGGCTCCCGGTCTTGTTACCCTGCTGTTGCTGCT +
Preference number: 6 (lower is better)
Translates to: HLRLLGCWRAAP*GSRSCYPAVAA
Trigger: AGCAGCAACAGCAGGGTAACAAGACCGGGAGCCGCACGGGGCCGCCCGCCAGCATCCGAGGAGGCGGAGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp TCGCTCTCGCCGCCGATGGGCCCTTCGCGCTTGCGGTaGGGAGGCCGCGAGTCGTCGTCGCTCTCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: SLSPPMGPSRLR*GGRESSSLSFL
Trigger: CAAGAAGGAGAGCGACGACGACTCGCGGCCTCCGCACCGCAAGCGCGAAGGGCCCATCGGCGGCGAGAGCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp CGGATGCTGGCGGGCGGCCCCGTGCGGCTCCCGGTCTaGTTACCCTGCTGTTGCTGCTGCTGCAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RMLAGGPVRLPV*LPCCCCCCSCC
Trigger: GCAGCAGCTGCAGCAGCAGCAACAGCAGGGTAACAAGACCGGGAGCCGCACGGGGCCGCCCGCCAGCATCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 90 bp CCGCCTCCTCGGATGCTGGCGGGCGGCCCCGTGCGGCTCCCGGTCTaGTTACCCTGCTGTTGCTGCTGCTGCAGCTGCTGCTGCCGAACA +
Preference number: 6 (lower is better)
Translates to: PPPRMLAGGPVRLPV*LPCCCCCCSCCCRT
Trigger: TGTTCGGCAGCAGCAGCTGCAGCAGCAGCAACAGCAGGGTAACAAGACCGGGAGCCGCACGGGGCCGCCCGCCAGCATCCGAGGAGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp GCGGGCGGCCCCGTGCGGCTCCCGGTCTTGTTACCCTaGTGTTGCTGCTGCTGCAGCTGCTGCTGCCGAACA +
Preference number: 6 (lower is better)
Translates to: AGGPVRLPVLLP*CCCCCSCCCRT
Trigger: TGTTCGGCAGCAGCAGCTGCAGCAGCAGCAACAGCAGGGTAACAAGACCGGGAGCCGCACGGGGCCGCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp AGGCGCTCGGCCTCCGAGCGGATGTCCTTCATCTGCTaGCGATCGGAGAAGCTCTTGGGCCAGGGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: RRSASERMSFIC*RSEKLLGQGPG
Trigger: GCCCGGGCCCTGGCCCAAGAGCTTCTCCGATCGGCAGCAGATGAAGGACATCCGCTCGGAGGCCGAGCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp CCCAGGCGCTCGGCCTCCGAGCGGATGTCCTTCATCTaGTGCCGATCGGAGAAGCTCTTGGGCCAGGGCCCG +
Preference number: 6 (lower is better)
Translates to: PRRSASERMSFI*CRSEKLLGQGP
Trigger: CGGGCCCTGGCCCAAGAGCTTCTCCGATCGGCAGCAGATGAAGGACATCCGCTCGGAGGCCGAGCGCCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CCA 72 bp AGCTCCTCCTGCAGGGCCTCGGTCTTGGCGTTGTCGTaGTGCCGCGCGCTGTCGTGGCCGCCGGACTTGTAC +
Preference number: 6 (lower is better)
Translates to: SSSCRASVLALS*CRALSWPPDLY
Trigger: GTACAAGTCCGGCGGCCACGACAGCGCGCGGCACCACGACAACGCCAAGACCGAGGCCCTGCAGGAGGAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp TCCTCCTGCAGGGCCTCGGTCTTGGCGTTGTCGTGGTaGCGCGCGCTGTCGTGGCCGCCGGACTTGTACTTG +
Preference number: 6 (lower is better)
Translates to: SSCRASVLALSW*RALSWPPDLYL
Trigger: CAAGTACAAGTCCGGCGGCCACGACAGCGCGCGGCACCACGACAACGCCAAGACCGAGGCCCTGCAGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp GAAATGGGCTCCTCGGCGCCGCGGTCGTCCGCAGACTaGGGCACCTCGAGGCGGTCGATGAAGGTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: EMGSSAPRSSAD*GTSRRSMKVCS
Trigger: GCTGCAGACCTTCATCGACCGCCTCGAGGTGCCCAAGTCTGCGGACGACCGCGGCGCCGAGGAGCCCATTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 72 bp GCTCCCGGATGCGGCTGCCGTCGTCCTCCTCGTCCATaGGTCCGAACAGGTCCCCGTTGGCCACGTAGATGC +
Preference number: 6 (lower is better)
Translates to: APGCGCRRPPRP*VRTGPRWPRRC
Trigger: GCATCTACGTGGCCAACGGGGACCTGTTCGGACTCATGGACGAGGAGGACGACGGCAGCCGCATCCGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CCA 72 bp GGATGTCCTTCATCTGCTGCCGATCGGAGAAGCTCTTaGGCCAGGGCCCGGGCGCCGGGTAGAAGGAGCGAG +
Preference number: 6 (lower is better)
Translates to: GCPSSAADRRSS*ARARAPGRRSE
Trigger: CTCGCTCCTTCTACCCGGCGCCCGGGCCCTGGCCCAAGAGCTTCTCCGATCGGCAGCAGATGAAGGACATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp ATGGTGCTCGTGTCGGCGATGAGCCGGTCGATGGTCTaGCCCAGGCGCTCGGCCTCCGAGCGGATGTCCTTC +
Preference number: 6 (lower is better)
Translates to: MVLVSAMSRSMV*PRRSASERMSF
Trigger: GAAGGACATCCGCTCGGAGGCCGAGCGCCTGGGCAAGACCATCGACCGGCTCATCGCCGACACGAGCACCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 90 bp TGGAACATGGAAATGGGCTCCTCGGCGCCGCGGTCGTCCGCAGACTaGGGCACCTCGAGGCGGTCGATGAAGGTCTGCAGCTCCTTGCGG +
Preference number: 6 (lower is better)
Translates to: WNMEMGSSAPRSSAD*GTSRRSMKVCSSLR
Trigger: CCGCAAGGAGCTGCAGACCTTCATCGACCGCCTCGAGGTGCCCAAGTCTGCGGACGACCGCGGCGCCGAGGAGCCCATTTCCATGTTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465909.2
CDS GCA 72 bp TGCAGGTGCTGCCGCAGCTCCGACAGGGATTCGCTCTaGTCCCTCATGAGCGGGTTGGCCGAGCCGTTGAAG +
Preference number: 6 (lower is better)
Translates to: CRCCRSSDRDSL*SLMSGLAEPLK
Trigger: CTTCAACGGCTCGGCCAACCCGCTCATGAGGGAGCAGAGCGAATCCCTGTCGGAGCTGCGGCAGCACCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp AGCAGCTCCGTCTCGTCTTCCACCAGCTGCAGGTGCTaGCGCAGCTCCGACAGGGATTCGCTCTGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: SSSVSSSTSCRC*RSSDRDSLCSL
Trigger: GAGGGAGCAGAGCGAATCCCTGTCGGAGCTGCGGCAGCACCTGCAGCTGGTGGAAGACGAGACGGAGCTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 90 bp TGGTGCCGCGCGCTGTCGTGGCCGCCGGACTTGTACTTGTACTTGTaGAGCTCCGCCGTGATGCGCTTGTTCTGCTCCTCCAGGTCGGCC +
Preference number: 6 (lower is better)
Translates to: WCRALSWPPDLYLYL*SSAVMRLFCSSRSA
Trigger: GGCCGACCTGGAGGAGCAGAACAAGCGCATCACGGCGGAGCTCAACAAGTACAAGTACAAGTCCGGCGGCCACGACAGCGCGCGGCACCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 90 bp TCGGTGATGATGGTGCTCGTGTCGGCGATGAGCCGGTCGATGGTCTaGCCCAGGCGCTCGGCCTCCGAGCGGATGTCCTTCATCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SVMMVLVSAMSRSMV*PRRSASERMSFICC
Trigger: GCAGCAGATGAAGGACATCCGCTCGGAGGCCGAGCGCCTGGGCAAGACCATCGACCGGCTCATCGCCGACACGAGCACCATCATCACCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp GGCCCCGTGCGGCTCCCGGTCTTGTTACCCTGCTGTTaGTGCTGCTGCAGCTGCTGCTGCCGAACAGAATTG +
Preference number: 6 (lower is better)
Translates to: GPVRLPVLLPCC*CCCSCCCRTEL
Trigger: CAATTCTGTTCGGCAGCAGCAGCTGCAGCAGCAGCAACAGCAGGGTAACAAGACCGGGAGCCGCACGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CCA 72 bp CTGCCGAACAGAATTGAGTTTAGTGCCGGCCCCCACTaGGGACCGGGTGGCCGCGATTGTCTGTCGCAGCGA +
Preference number: 6 (lower is better)
Translates to: LPNRIEFSAGPH*GPGGRDCLSQR
Trigger: TCGCTGCGACAGACAATCGCGGCCACCCGGTCCCCAGTGGGGGCCGGCACTAAACTCAATTCTGTTCGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp CGGCCCCGTGCGGCTCCCGGTCTTGTTACCCTGCTGTaGCTGCTGCTGCAGCTGCTGCTGCCGAACAGAATT +
Preference number: 6 (lower is better)
Translates to: RPRAAPGLVTLL*LLLQLLLPNRI
Trigger: AATTCTGTTCGGCAGCAGCAGCTGCAGCAGCAGCAACAGCAGGGTAACAAGACCGGGAGCCGCACGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp TCGCTCTGCTCCCTCATGAGCGGGTTGGCCGAGCCGTaGAAGTCATCGCCCCTAAGGTCGTCCAGTTCCGCC +
Preference number: 6 (lower is better)
Translates to: SLCSLMSGLAEP*KSSPLRSSSSA
Trigger: GGCGGAACTGGACGACCTTAGGGGCGATGACTTCAACGGCTCGGCCAACCCGCTCATGAGGGAGCAGAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp TTGTCGTGGTGCCGCGCGCTGTCGTGGCCGCCGGACTaGTACTTGTACTTGTTGAGCTCCGCCGTGATGCGC +
Preference number: 6 (lower is better)
Translates to: LSWCRALSWPPD*YLYLLSSAVMR
Trigger: GCGCATCACGGCGGAGCTCAACAAGTACAAGTACAAGTCCGGCGGCCACGACAGCGCGCGGCACCACGACAA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 90 bp GCTGGCGGGCGGCCCCGTGCGGCTCCCGGTCTTGTTACCCTGCTGTaGCTGCTGCTGCAGCTGCTGCTGCCGAACAGAATTGAGTTTAGT +
Preference number: 6 (lower is better)
Translates to: AGGRPRAAPGLVTLL*LLLQLLLPNRIEFS
Trigger: ACTAAACTCAATTCTGTTCGGCAGCAGCAGCTGCAGCAGCAGCAACAGCAGGGTAACAAGACCGGGAGCCGCACGGGGCCGCCCGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 90 bp TGCCGCAGCTCCGACAGGGATTCGCTCTGCTCCCTCATGAGCGGGTaGGCCGAGCCGTTGAAGTCATCGCCCCTAAGGTCGTCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: CRSSDRDSLCSLMSG*AEPLKSSPLRSSSS
Trigger: GGAACTGGACGACCTTAGGGGCGATGACTTCAACGGCTCGGCCAACCCGCTCATGAGGGAGCAGAGCGAATCCCTGTCGGAGCTGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 90 bp TCGTGGTGCCGCGCGCTGTCGTGGCCGCCGGACTTGTACTTGTACTaGTTGAGCTCCGCCGTGATGCGCTTGTTCTGCTCCTCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: SWCRALSWPPDLYLY*LSSAVMRLFCSSRS
Trigger: CGACCTGGAGGAGCAGAACAAGCGCATCACGGCGGAGCTCAACAAGTACAAGTACAAGTCCGGCGGCCACGACAGCGCGCGGCACCACGA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 90 bp GCGTTGTCGTGGTGCCGCGCGCTGTCGTGGCCGCCGGACTTGTACTaGTACTTGTTGAGCTCCGCCGTGATGCGCTTGTTCTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ALSWCRALSWPPDLY*YLLSSAVMRLFCSS
Trigger: GGAGGAGCAGAACAAGCGCATCACGGCGGAGCTCAACAAGTACAAGTACAAGTCCGGCGGCCACGACAGCGCGCGGCACCACGACAACGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 90 bp TTACCCTGCTGTTGCTGCTGCTGCAGCTGCTGCTGCCGAACAGAATaGAGTTTAGTGCCGGCCCCCACTGGGGACCGGGTGGCCGCGATT +
Preference number: 6 (lower is better)
Translates to: LPCCCCCCSCCCRTE*SLVPAPTGDRVAAI
Trigger: AATCGCGGCCACCCGGTCCCCAGTGGGGGCCGGCACTAAACTCAATTCTGTTCGGCAGCAGCAGCTGCAGCAGCAGCAACAGCAGGGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 90 bp GACAGGGATTCGCTCTGCTCCCTCATGAGCGGGTTGGCCGAGCCGTaGAAGTCATCGCCCCTAAGGTCGTCCAGTTCCGCCTTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: DRDSLCSLMSGLAEP*KSSPLRSSSSAFRP
Trigger: AGGCCTGAAGGCGGAACTGGACGACCTTAGGGGCGATGACTTCAACGGCTCGGCCAACCCGCTCATGAGGGAGCAGAGCGAATCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 90 bp GTCTTGGCGTTGTCGTGGTGCCGCGCGCTGTCGTGGCCGCCGGACTaGTACTTGTACTTGTTGAGCTCCGCCGTGATGCGCTTGTTCTGC +
Preference number: 6 (lower is better)
Translates to: VLALSWCRALSWPPD*YLYLLSSAVMRLFC
Trigger: GCAGAACAAGCGCATCACGGCGGAGCTCAACAAGTACAAGTACAAGTCCGGCGGCCACGACAGCGCGCGGCACCACGACAACGCCAAGAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 72 bp TGTCTGTCGCAGCGAACTGTCCCTCGGTCTAGCGGGTaGCTGAGCTCGCTGCTGCTTTCTGCTGCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: CLSQRTVPRSSG*LSSLLLSAAAL
Trigger: GAGGGCAGCAGCAGAAAGCAGCAGCGAGCTCAGTCACCCGCTAGACCGAGGGACAGTTCGCTGCGACAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 72 bp GGTCGTCCGCAGACTTGGGCACCTCGAGGCGGTCGATaGAGGTCTGCAGCTCCTTGCGGAAGGCCTTCATCT +
Preference number: 6 (lower is better)
Translates to: GRPQTWAPRGGR*RSAAPCGRPSS
Trigger: AGATGAAGGCCTTCCGCAAGGAGCTGCAGACCTTCATCGACCGCCTCGAGGTGCCCAAGTCTGCGGACGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp TGTTGCTGCTGCTGCAGCTGCTGCTGCCGAACAGAATaGAGTTTAGTGCCGGCCCCCACTGGGGACCGGGTG +
Preference number: 6 (lower is better)
Translates to: CCCCCSCCCRTE*SLVPAPTGDRV
Trigger: CACCCGGTCCCCAGTGGGGGCCGGCACTAAACTCAATTCTGTTCGGCAGCAGCAGCTGCAGCAGCAGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp TCCGACAGGGATTCGCTCTGCTCCCTCATGAGCGGGTaGGCCGAGCCGTTGAAGTCATCGCCCCTAAGGTCG +
Preference number: 6 (lower is better)
Translates to: SDRDSLCSLMSG*AEPLKSSPLRS
Trigger: CGACCTTAGGGGCGATGACTTCAACGGCTCGGCCAACCCGCTCATGAGGGAGCAGAGCGAATCCCTGTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp CGCGCGCTGTCGTGGCCGCCGGACTTGTACTTGTACTaGTTGAGCTCCGCCGTGATGCGCTTGTTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: RALSWPPDLYLY*LSSAVMRLFCS
Trigger: GGAGCAGAACAAGCGCATCACGGCGGAGCTCAACAAGTACAAGTACAAGTCCGGCGGCCACGACAGCGCGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp TGGTGCCGCGCGCTGTCGTGGCCGCCGGACTTGTACTaGTACTTGTTGAGCTCCGCCGTGATGCGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: WCRALSWPPDLY*YLLSSAVMRLF
Trigger: GAACAAGCGCATCACGGCGGAGCTCAACAAGTACAAGTACAAGTCCGGCGGCCACGACAGCGCGCGGCACCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 72 bp GCTGCTGTGGCAGGGGCAGCGCCCCCGATTGGTGGCTaGCTCATGGCTATGAACCTACCAGATGCGATTTGG +
Preference number: 6 (lower is better)
Translates to: AAVAGAAPPIGG*LMAMNLPDAIW
Trigger: CCAAATCGCATCTGGTAGGTTCATAGCCATGAGTCAGCCACCAATCGGGGGCGCTGCCCCTGCCACAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CCA 72 bp AGCTGCTGCTGTGGCAGGGGCAGCGCCCCCGATTGGTaGCTGACTCATGGCTATGAACCTACCAGATGCGAT +
Preference number: 6 (lower is better)
Translates to: SCCCGRGSAPDW*LTHGYEPTRCD
Trigger: ATCGCATCTGGTAGGTTCATAGCCATGAGTCAGCCACCAATCGGGGGCGCTGCCCCTGCCACAGCAGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CCA 72 bp AGAAGCTGCTGCTGTGGCAGGGGCAGCGCCCCCGATTaGTGGCTGACTCATGGCTATGAACCTACCAGATGC +
Preference number: 6 (lower is better)
Translates to: RSCCCGRGSAPD*WLTHGYEPTRC
Trigger: GCATCTGGTAGGTTCATAGCCATGAGTCAGCCACCAATCGGGGGCGCTGCCCCTGCCACAGCAGCAGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CCA 72 bp GCAGCTCTCAGCAGGCTAACACGCGAGGTACCAAGCTaGGCCAGACGCTCCCCAGGAAGTGCAGAGATGTTC +
Preference number: 6 (lower is better)
Translates to: AALSRLTREVPS*ARRSPGSAEMF
Trigger: GAACATCTCTGCACTTCCTGGGGAGCGTCTGGCCCAGCTTGGTACCTCGCGTGTTAGCCTGCTGAGAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525778.5
CDS CAA 72 bp GCGCTGTCGTGGCCGCCGGACTTGTACTTGTACTTGTaGAGCTCCGCCGTGATGCGCTTGTTCTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ALSWPPDLYLYL*SSAVMRLFCSS
Trigger: GGAGGAGCAGAACAAGCGCATCACGGCGGAGCTCAACAAGTACAAGTACAAGTCCGGCGGCCACGACAGCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 72 bp GGGCAGCGCCCCCGATTGGTGGCTGACTCATGGCTATaGACCTACCAGATGCGATTTGGAAGAGCCCATTAC +
Preference number: 6 (lower is better)
Translates to: GQRPRLVADSWL*TYQMRFGRAHY
Trigger: GTAATGGGCTCTTCCAAATCGCATCTGGTAGGTTCATAGCCATGAGTCAGCCACCAATCGGGGGCGCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465909.2
ENST00000467753.1
ENST00000525778.5
CDS GCA 72 bp TTGTTACCCTGCTGTTGCTGCTGCTGCAGCTGCTGCTaGCGAACAGAATTGAGTTTAGTGCCGGCCCCCACT +
Preference number: 6 (lower is better)
Translates to: LLPCCCCCCSCC*RTELSLVPAPT
Trigger: AGTGGGGGCCGGCACTAAACTCAATTCTGTTCGGCAGCAGCAGCTGCAGCAGCAGCAACAGCAGGGTAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp CGGCTCCCGGTCTTGTTACCCTGCTGTTGCTGCTGCTaGAGCTGCTGCTGCCGAACAGAATTGAGTTTAGTG +
Preference number: 6 (lower is better)
Translates to: RLPVLLPCCCCC*SCCCRTELSLV
Trigger: CACTAAACTCAATTCTGTTCGGCAGCAGCAGCTGCAGCAGCAGCAACAGCAGGGTAACAAGACCGGGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS TCA 72 bp TTGGCTCTCTCCAACTCGTGGCGCATTTCCTGCAGTTaGCAGGCATCCTCCTCGAAGAAAGTGTCCCTCATC +
Preference number: 6 (lower is better)
Translates to: LALSNSWRISCS*QASSSKKVSLI
Trigger: GATGAGGGACACTTTCTTCGAGGAGGATGCCTGTCAACTGCAGGAAATGCGCCACGAGTTGGAGAGAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp GTTGGCTCTCTCCAACTCGTGGCGCATTTCCTGCAGTaGACAGGCATCCTCCTCGAAGAAAGTGTCCCTCAT +
Preference number: 6 (lower is better)
Translates to: VGSLQLVAHFLQ*TGILLEESVPH
Trigger: ATGAGGGACACTTTCTTCGAGGAGGATGCCTGTCAACTGCAGGAAATGCGCCACGAGTTGGAGAGAGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 90 bp AGAGCCACGCCCGAGATGGAAGATTGGCAGCAGCGCTCAAACTCCTaGCTCTATTCTCTTATCCCGTACTTGGCAGAGGATCCCAAAACC +
Preference number: 6 (lower is better)
Translates to: RATPEMEDWQQRSNS*LYSLIPYLAEDPKT
Trigger: GGTTTTGGGATCCTCTGCCAAGTACGGGATAAGAGAATAGAGCAAGGAGTTTGAGCGCTGCTGCCAATCTTCCATCTCGGGCGTGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525778.5
CDS CCA 72 bp GACAAAAAGGCCAGAGCCACGCCCGAGATGGAAGATTaGCAGCAGCGCTCAAACTCCTTGCTCTATTCTCTT +
Preference number: 6 (lower is better)
Translates to: DKKARATPEMED*QQRSNSLLYSL
Trigger: AAGAGAATAGAGCAAGGAGTTTGAGCGCTGCTGCCAATCTTCCATCTCGGGCGTGGCTCTGGCCTTTTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525778.5
CDS CAA 72 bp ATATTATTGTATGCGACTTTCCGGCTGAGCATGACTTaGGGCTCGCTCGCCGCAGTTCCACACCCACTCGAT +
Preference number: 6 (lower is better)
Translates to: ILLYATFRLSMT*GSLAAVPHPLD
Trigger: ATCGAGTGGGTGTGGAACTGCGGCGAGCGAGCCCAAAGTCATGCTCAGCCGGAAAGTCGCATACAATAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465909.2
ENST00000467753.1
ENST00000525778.5
CDS CAA 72 bp AGACAAAAAGGCCAGAGCCACGCCCGAGATGGAAGATaGGCAGCAGCGCTCAAACTCCTTGCTCTATTCTCT +
Preference number: 6 (lower is better)
Translates to: RQKGQSHARDGR*AAALKLLALFS
Trigger: AGAGAATAGAGCAAGGAGTTTGAGCGCTGCTGCCAATCTTCCATCTCGGGCGTGGCTCTGGCCTTTTTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525778.5
CDS CAA 90 bp CCCGATTGGTGGCTGACTCATGGCTATGAACCTACCAGATGCGATTaGGAAGAGCCCATTACTAGATCATCCTCTTCCCTCTTCACCGCC +
Preference number: 6 (lower is better)
Translates to: PDWWLTHGYEPTRCD*EEPITRSSSSLFTA
Trigger: GGCGGTGAAGAGGGAAGAGGATGATCTAGTAATGGGCTCTTCCAAATCGCATCTGGTAGGTTCATAGCCATGAGTCAGCCACCAATCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465909.2
ENST00000467753.1
ENST00000525778.5
CDS CAA 90 bp GCAGTTTTTGTTGGCTCTCTCCAACTCGTGGCGCATTTCCTGCAGTaGACAGGCATCCTCCTCGAAGAAAGTGTCCCTCATCTCGTCCAT +
Preference number: 6 (lower is better)
Translates to: AVFVGSLQLVAHFLQ*TGILLEESVPHLVH
Trigger: ATGGACGAGATGAGGGACACTTTCTTCGAGGAGGATGCCTGTCAACTGCAGGAAATGCGCCACGAGTTGGAGAGAGCCAACAAAAACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp CCCGAGATGGAAGATTGGCAGCAGCGCTCAAACTCCTaGCTCTATTCTCTTATCCCGTACTTGGCAGAGGAT +
Preference number: 6 (lower is better)
Translates to: PEMEDWQQRSNS*LYSLIPYLAED
Trigger: ATCCTCTGCCAAGTACGGGATAAGAGAATAGAGCAAGGAGTTTGAGCGCTGCTGCCAATCTTCCATCTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525778.5
CDS CAA 90 bp TTCAACTTCATATTATTGTATGCGACTTTCCGGCTGAGCATGACTTaGGGCTCGCTCGCCGCAGTTCCACACCCACTCGATTTCTCCAAA +
Preference number: 6 (lower is better)
Translates to: FNFILLYATFRLSMT*GSLAAVPHPLDFSK
Trigger: TTTGGAGAAATCGAGTGGGTGTGGAACTGCGGCGAGCGAGCCCAAAGTCATGCTCAGCCGGAAAGTCGCATACAATAATATGAAGTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465909.2
ENST00000467753.1
ENST00000525778.5
CDS GCA 72 bp TCTGCGCCGAGGAAAGTTCAACTTCATATTATTGTATaGGACTTTCCGGCTGAGCATGACTTTGGGCTCGCT +
Preference number: 6 (lower is better)
Translates to: SAPRKVQLHIIV*DFPAEHDFGLA
Trigger: AGCGAGCCCAAAGTCATGCTCAGCCGGAAAGTCGCATACAATAATATGAAGTTGAACTTTCCTCGGCGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465909.2
ENST00000467753.1
ENST00000525778.5
CDS CAA 72 bp GCCTTTCTGCGCCGAGGAAAGTTCAACTTCATATTATaGTATGCGACTTTCCGGCTGAGCATGACTTTGGGC +
Preference number: 6 (lower is better)
Translates to: AFLRRGKFNFIL*YATFRLSMTLG
Trigger: GCCCAAAGTCATGCTCAGCCGGAAAGTCGCATACAATAATATGAAGTTGAACTTTCCTCGGCGCAGAAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465909.2
ENST00000467753.1
ENST00000525778.5
CDS CAA 90 bp TATTATTGTGCCTTTCTGCGCCGAGGAAAGTTCAACTTCATATTATaGTATGCGACTTTCCGGCTGAGCATGACTTTGGGCTCGCTCGCC +
Preference number: 6 (lower is better)
Translates to: YYCAFLRRGKFNFIL*YATFRLSMTLGSLA
Trigger: GGCGAGCGAGCCCAAAGTCATGCTCAGCCGGAAAGTCGCATACAATAATATGAAGTTGAACTTTCCTCGGCGCAGAAAGGCACAATAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465909.2
ENST00000467753.1
ENST00000525778.5
CDS CAA 90 bp TTCCTAAGCCCATCATTCATCCCCAACCCTTTAGAAATCCAGAACTaGCTCACTTCTCAGCAGAGGCGAGGTTTCCAAGTAGCTGAACAA +
Preference number: 6 (lower is better)
Translates to: FLSPSFIPNPLEIQN*LTSQQRRGFQVAEQ
Trigger: TTGTTCAGCTACTTGGAAACCTCGCCTCTGCTGAGAAGTGAGCAAGTTCTGGATTTCTAAAGGGTTGGGGATGAATGATGGGCTTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS CAA 72 bp CCATCATTCATCCCCAACCCTTTAGAAATCCAGAACTaGCTCACTTCTCAGCAGAGGCGAGGTTTCCAAGTA +
Preference number: 6 (lower is better)
Translates to: PSFIPNPLEIQN*LTSQQRRGFQV
Trigger: TACTTGGAAACCTCGCCTCTGCTGAGAAGTGAGCAAGTTCTGGATTTCTAAAGGGTTGGGGATGAATGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5
CDS GCA 72 bp CTTCTGATATTCCGGGGATCTCAGGGTTTATTATTGTaGCTTTCTGCGCCGAGGAAAGTTCAACTTCATATT +
Preference number: 6 (lower is better)
Translates to: LLIFRGSQGLLL*LSAPRKVQLHI
Trigger: AATATGAAGTTGAACTTTCCTCGGCGCAGAAAGGCACAATAATAAACCCTGAGATCCCCGGAATATCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465909.2
ENST00000467753.1
ENST00000525778.5
CDS GCA 72 bp ATTCCGGGGATCTCAGGGTTTATTATTGTGCCTTTCTaGGCCGAGGAAAGTTCAACTTCATATTATTGTATG +
Preference number: 6 (lower is better)
Translates to: IPGISGFIIVPF*AEESSTSYYCM
Trigger: CATACAATAATATGAAGTTGAACTTTCCTCGGCGCAGAAAGGCACAATAATAAACCCTGAGATCCCCGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465909.2
ENST00000467753.1
ENST00000525778.5
CDS TCA 72 bp CATTCTGTAAAGCTTGCTTTGCAATTTCAACTTCTATaGGCTGTTGCCTCAGTTTCTCATTTTCATCTTCTG +
Preference number: 6 (lower is better)
Translates to: HSVKLALQFQLL*AVASVSHFHLL
Trigger: CAGAAGATGAAAATGAGAAACTGAGGCAACAGCTCATAGAAGTTGAAATTGCAAAGCAAGCTTTACAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465909.2
ENST00000525778.5