RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SOD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000112096

Ensembl transcript IDs: ENST00000337404.8, ENST00000367054.6, ENST00000367055.8, ENST00000401980.3, ENST00000444946.6, ENST00000452684.2, ENST00000535561.5, ENST00000537657.5, ENST00000538183.7, ENST00000540491.1, ENST00000541573.5, ENST00000545162.5, ENST00000546087.5, ENST00000546260.5

Found 576 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGTGGGTGCAGCCCACTGAGCATGAGCTGAAGCAGGGCAAGGCATaGCCTCACCCGGGAAGGCAAGGGGTCAGGGAATTCCCTTTCCTA +
Preference number: 1 (lower is better)
Translates to: RWVQPTEHELKQGKA*PHPGRQGVREFPFL
Trigger: TAGGAAAGGGAATTCCCTGACCCCTTGCCTTCCCGGGTGAGGCCATGCCTTGCCCTGCTTCAGCTCATGCTCAGTGGGCTGCACCCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 90 bp CTATCAGGAGGTGACCCTGACACTCAGAGACACCTGCGGACCCGATaGTGTCTGGCCACCAGTGGACAGGCGCTCTCAGCCCTCCTGCAA +
Preference number: 1 (lower is better)
Translates to: LSGGDPDTQRHLRTR*CLATSGQALSALLQ
Trigger: TTGCAGGAGGGCTGAGAGCGCCTGTCCACTGGTGGCCAGACATCATCGGGTCCGCAGGTGTCTCTGAGTGTCAGGGTCACCTCCTGATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR GCA 90 bp CACTCCCACTTCTATCAGGAGGTGACCCTGACACTCAGAGACACCTaGGGACCCGATGATGTCTGGCCACCAGTGGACAGGCGCTCTCAG +
Preference number: 1 (lower is better)
Translates to: HSHFYQEVTLTLRDT*GPDDVWPPVDRRSQ
Trigger: CTGAGAGCGCCTGTCCACTGGTGGCCAGACATCATCGGGTCCGCAGGTGTCTCTGAGTGTCAGGGTCACCTCCTGATAGAAGTGGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR CCA 90 bp CAGGTTCATCTCACTGGGGCTTGTTGGACAGTGGGTGTAGGACGGTaGGTGCAGCCCACTGAGCATGAGCTGAAGCAGGGCAAGGCATGG +
Preference number: 1 (lower is better)
Translates to: QVHLTGACWTVGVGR*VQPTEHELKQGKAW
Trigger: CCATGCCTTGCCCTGCTTCAGCTCATGCTCAGTGGGCTGCACCCACCGTCCTACACCCACTGTCCAACAAGCCCCAGTGAGATGAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 90 bp AGTCAAGTGGGCTCAGTGAAGTTTCACCTGCAGGGTAGCTGGGGATaGAGGGAGTCTCCAAGTCCTAGGCTGGAGTCCCGACCCCGTTTG +
Preference number: 1 (lower is better)
Translates to: SQVGSVKFHLQGSWG*RESPSPRLESRPRL
Trigger: CAAACGGGGTCGGGACTCCAGCCTAGGACTTGGAGACTCCCTGCATCCCCAGCTACCCTGCAGGTGAAACTTCACTGAGCCCACTTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR CCA 90 bp ACCTGCAGGGTAGCTGGGGATGCAGGGAGTCTCCAAGTCCTAGGCTaGAGTCCCGACCCCGTTTGCTCTCAGGAAGATGACAAGGACCAT +
Preference number: 1 (lower is better)
Translates to: TCRVAGDAGSLQVLG*SPDPVCSQEDDKDH
Trigger: ATGGTCCTTGTCATCTTCCTGAGAGCAAACGGGGTCGGGACTCCAGCCTAGGACTTGGAGACTCCCTGCATCCCCAGCTACCCTGCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR CCA 90 bp GCAGCTCAAGGAGGCCTGCCTGCCTGCCTCTGTAGACTCCACCTCTaGGGGCATGGCATAGCCGAACAAAAGGCAGCAGAAATCTCTGCA +
Preference number: 1 (lower is better)
Translates to: AAQGGLPACLCRLHL*GHGIAEQKAAEISA
Trigger: TGCAGAGATTTCTGCTGCCTTTTGTTCGGCTATGCCATGCCCCCAGAGGTGGAGTCTACAGAGGCAGGCAGGCAGGCCTCCTTGAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 90 bp CTGCACTTCCAACTGAGGTACCAGGTTCATCTCACTGGGGCTTGTTaGACAGTGGGTGTAGGACGGTGGGTGCAGCCCACTGAGCATGAG +
Preference number: 1 (lower is better)
Translates to: LHFQLRYQVHLTGAC*TVGVGRWVQPTEHE
Trigger: CTCATGCTCAGTGGGCTGCACCCACCGTCCTACACCCACTGTCCAACAAGCCCCAGTGAGATGAACCTGGTACCTCAGTTGGAAGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 90 bp CCAAGTCCTAGGCTGGAGTCCCGACCCCGTTTGCTCTCAGGAAGATaGCAAGGACCATGGTTCCTAGCACGGAGTAGTGTCCTCCTGTCT +
Preference number: 1 (lower is better)
Translates to: PSPRLESRPRLLSGR*QGPWFLARSSVLLS
Trigger: AGACAGGAGGACACTACTCCGTGCTAGGAACCATGGTCCTTGTCATCTTCCTGAGAGCAAACGGGGTCGGGACTCCAGCCTAGGACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR TCA 90 bp GGGGTCCAGATGAGCTTCTGGGTAGCTGATGACGTGGAGAGAGCATaGAAGCTCCATACCCCTTCCCACATGCCTTGCCCTGTGCATCTC +
Preference number: 1 (lower is better)
Translates to: GVQMSFWVADDVERA*KLHTPSHMPCPVHL
Trigger: GAGATGCACAGGGCAAGGCATGTGGGAAGGGGTATGGAGCTTTCATGCTCTCTCCACGTCATCAGCTACCCAGAAGCTCATCTGGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 90 bp CAGCTCCAGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACAGGTaGTTTCTGCACTTCCAACTGAGGTACCAGGTTCATCTCACTGGG +
Preference number: 1 (lower is better)
Translates to: QLQSTAPSVSDAEDR*FLHFQLRYQVHLTG
Trigger: CCCAGTGAGATGAACCTGGTACCTCAGTTGGAAGTGCAGAAATCACCTGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 90 bp GGACAGGCGCTCTCAGCCCTCCTGCAAACGGCTGGCACACCTACCTaGGAGACCAAACATTTCCCCAAAGCACATTATACAACAAGAACA +
Preference number: 1 (lower is better)
Translates to: GQALSALLQTAGTPT*ETKHFPKAHYTTRT
Trigger: TGTTCTTGTTGTATAATGTGCTTTGGGGAAATGTTTGGTCTCTCAGGTAGGTGTGCCAGCCGTTTGCAGGAGGGCTGAGAGCGCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR TCA 90 bp CAGGGACTAAACTCTGACCTCCATTCTTTGCTCTCAGTTTCTTCCTaGGGGGCCTGGCCAGACCTTAATGTTCCTTTCTGCGGACCCCAA +
Preference number: 1 (lower is better)
Translates to: QGLNSDLHSLLSVSS*GAWPDLNVPFCGPQ
Trigger: TTGGGGTCCGCAGAAAGGAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGAGGTCAGAGTTTAGTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR TCA 90 bp GGAGCACAAATTATAGTGGGCAGAGAGGCAAACTTGGAATCACCGTaGCGCTGGGCATCGAGACTACTGGGTGCAACAATGGGACACACT +
Preference number: 1 (lower is better)
Translates to: GAQIIVGREANLESP*RWASRLLGATMGHT
Trigger: AGTGTGTCCCATTGTTGCACCCAGTAGTCTCGATGCCCAGCGTCACGGTGATTCCAAGTTTGCCTCTCTGCCCACTATAATTTGTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 90 bp GCGTGGACGTCCAGCAAACTCCAACAGACCTGCAGCTGGCGGTCCTaGCTGTTAGAAGGAAAACTAACAAACAGAAAGGACATCCACACC +
Preference number: 1 (lower is better)
Translates to: AWTSSKLQQTCSWRS*LLEGKLTNRKDIHT
Trigger: GGTGTGGATGTCCTTTCTGTTTGTTAGTTTTCCTTCTAACAGTCAGGACCGCCAGCTGCAGGTCTGTTGGAGTTTGCTGGACGTCCACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 90 bp CCTCTGGGGGCATGGCATAGCCGAACAAAAGGCAGCAGAAATCTCTaGAGACTTCAATGTCCCTGTCTGACAGCTTTGAAGAGACCAGTG +
Preference number: 1 (lower is better)
Translates to: PLGAWHSRTKGSRNL*RLQCPCLTALKRPV
Trigger: CACTGGTCTCTTCAAAGCTGTCAGACAGGGACATTGAAGTCTGCAGAGATTTCTGCTGCCTTTTGTTCGGCTATGCCATGCCCCCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 90 bp CAGGCCCTACAATTCACCAGTGCTGGCAATATGTGTAACGGAATGTaGCTCACAACAGTAAGGCAAGCTCCTTCGCAGGACCCCAAGTTC +
Preference number: 1 (lower is better)
Translates to: QALQFTSAGNMCNGM*LTTVRQAPSQDPKF
Trigger: GAACTTGGGGTCCTGCGAAGGAGCTTGCCTTACTGTTGTGAGCCACATTCCGTTACACATATTGCCAGCACTGGTGAATTGTAGGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR GCA 90 bp CTGATGACGTGGAGAGAGCATGAAAGCTCCATACCCCTTCCCACATaGCTTGCCCTGTGCATCTCTTCCATCTGGCTGTTCATCTGTATT +
Preference number: 1 (lower is better)
Translates to: LMTWREHESSIPLPT*LALCISSIWLFICI
Trigger: AATACAGATGAACAGCCAGATGGAAGAGATGCACAGGGCAAGGCATGTGGGAAGGGGTATGGAGCTTTCATGCTCTCTCCACGTCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 90 bp CTAAAAATCAGAGCGCCTCTCCCCCTCCAAAGGAACATAGCTCCTTaGCAGCAACAGAACAAAGCTGGACGGAGAATGACTTTGACGAGT +
Preference number: 1 (lower is better)
Translates to: LKIRAPLPLQRNIAP*QQQNKAGRRMTLTS
Trigger: ACTCGTCAAAGTCATTCTCCGTCCAGCTTTGTTCTGTTGCTGGCAAGGAGCTATGTTCCTTTGGAGGGGGAGAGGCGCTCTGATTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 90 bp CCCCCTCCAAAGGAACATAGCTCCTTGCCAGCAACAGAACAAAGCTaGACGGAGAATGACTTTGACGAGTTGAGAGAAGAAGGCTTCAGA +
Preference number: 1 (lower is better)
Translates to: PPPKEHSSLPATEQS*TENDFDELREEGFR
Trigger: TCTGAAGCCTTCTTCTCTCAACTCGTCAAAGTCATTCTCCGTCCAGCTTTGTTCTGTTGCTGGCAAGGAGCTATGTTCCTTTGGAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 90 bp CACCTGTGGGATCTGACTCCAATTCCAGGTAGACAGTGTCAGAATTaGATTATAGGACATCCAGCTGGTGTCCACTGGACAACCTGGTGT +
Preference number: 1 (lower is better)
Translates to: HLWDLTPIPGRQCQN*IIGHPAGVHWTTWC
Trigger: ACACCAGGTTGTCCAGTGGACACCAGCTGGATGTCCTATAATTCAATTCTGACACTGTCTACCTGGAATTGGAGTCAGATCCCACAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 90 bp AGACACAGACTGGCACACTGGATAAAGAGTCAAGACCCATCAGGGTaGTGTATTCAGGAAACCCATCTCACGTACAGAGACACACACACA +
Preference number: 1 (lower is better)
Translates to: RHRLAHWIKSQDPSG*CIQETHLTYRDTHT
Trigger: TGTGTGTGTGTCTCTGTACGTGAGATGGGTTTCCTGAATACAGCACCCTGATGGGTCTTGACTCTTTATCCAGTGTGCCAGTCTGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 90 bp TGGGCATCGAGACTACTGGGTGCAACAATGGGACACACTGAAAGATaGCTAGCATGTCATAGGAACTTGAAAGCATTCGTGCTCCTTCCT +
Preference number: 1 (lower is better)
Translates to: WASRLLGATMGHTER*LACHRNLKAFVLLP
Trigger: AGGAAGGAGCACGAATGCTTTCAAGTTCCTATGACATGCTAGTCATCTTTCAGTGTGTCCCATTGTTGCACCCAGTAGTCTCGATGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 90 bp GGTTCCTGGTGTCAGATGTTGCCTTACAGGAAGTACTTTCACAACTaGGGTATTCCCCAGTCTCTCCCCATTACATGTTTCCCAAATTTG +
Preference number: 1 (lower is better)
Translates to: GSWCQMLPYRKYFHN*GIPQSLPITCFPNL
Trigger: CAAATTTGGGAAACATGTAATGGGGAGAGACTGGGGAATACCCCAGTTGTGAAAGTACTTCCTGTAAGGCAACATCTGACACCAGGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR CCA 90 bp TGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGGTGGTaGGACTGTAAACTAGTTCAACCATTGTGGAAGACAGTGTGGCGA +
Preference number: 1 (lower is better)
Translates to: CWRGCGEIGTLLHWW*DCKLVQPLWKTVWR
Trigger: TCGCCACACTGTCTTCCACAATGGTTGAACTAGTTTACAGTCCCACCACCAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 90 bp TGGTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGACAGTGTaGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCA +
Preference number: 1 (lower is better)
Translates to: WWWDCKLVQPLWKTV*RFLRDLELEIPFDP
Trigger: TGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCACAATGGTTGAACTAGTTTACAGTCCCACCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 90 bp AACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTaGTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGACAGTG +
Preference number: 1 (lower is better)
Translates to: NRCWRGCGEIGTLLH*WWDCKLVQPLWKTV
Trigger: CACTGTCTTCCACAATGGTTGAACTAGTTTACAGTCCCACCACCAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 90 bp CTTTACAAACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTaGCTTACAAGAGCTCCTGAAGGAAGCACTAAACATGGAATGGAA +
Preference number: 1 (lower is better)
Translates to: LYKQANAERFCHHQA*LTRAPEGSTKHGME
Trigger: TTCCATTCCATGTTTAGTGCTTCCTTCAGGAGCTCTTGTAAGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTTTGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 90 bp ACTGAATCCAGCAGCATATCAAAAAGCTTATCCACCATGATCAAGTaGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACATACACAAAT +
Preference number: 1 (lower is better)
Translates to: TESSSISKSLSTMIK*ASSLGCKAGSTYTN
Trigger: ATTTGTGTATGTTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATATGCTGCTGGATTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 90 bp ACACTTTTACACTGGTGGTGGGACTGTAAACTAGTTCAACCATTGTaGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATA +
Preference number: 1 (lower is better)
Translates to: TLLHWWWDCKLVQPL*KTVWRFLRDLELEI
Trigger: TATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCACAATGGTTGAACTAGTTTACAGTCCCACCACCAGTGTAAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 90 bp ACAACTAATAAGGTACAAATAAAAGGCGTTCTGTCGGAATTATCATaGACTGTGGTGGAAAGAACACTAAGGCAGGAAGTGGGTTCCAGA +
Preference number: 1 (lower is better)
Translates to: TTNKVQIKGVLSELS*TVVERTLRQEVGSR
Trigger: TCTGGAACCCACTTCCTGCCTTAGTGTTCTTTCCACCACAGTGCATGATAATTCCGACAGAACGCCTTTTATTTGTACCTTATTAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 90 bp CTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTaGTTCAACATACACAAATCAATAAAAGTAATCCAGCATATAAAC +
Preference number: 1 (lower is better)
Translates to: LIHHDQVGFIPGMQG*FNIHKSIKVIQHIN
Trigger: GTTTATATGCTGGATTACTTTTATTGATTTGTGTATGTTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 90 bp AATGGTGGCAGCTGTAAGCACTACCAGCAAGTATACCCTACTGGTTaGAGAACTTTGTTTAAAGGATATAAGTTGTGTGCCTTCTGTAAA +
Preference number: 1 (lower is better)
Translates to: NGGSCKHYQQVYPTG*RTLFKGYKLCAFCK
Trigger: TTTACAGAAGGCACACAACTTATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTTACAGCTGCCACCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 90 bp ACTAAACATGGAATGGAACAACCAGTATCAGCCACTGCAAAAACATaGCAAATTGTAAAGACCATTGAGGCTAGGAAGAAACTGCATCAA +
Preference number: 1 (lower is better)
Translates to: TKHGMEQPVSATAKT*QIVKTIEARKKLHQ
Trigger: TTGATGCAGTTTCTTCCTAGCCTCAATGGTCTTTACAATTTGGCATGTTTTTGCAGTGGCTGATACTGGTTGTTCCATTCCATGTTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 90 bp TGCAAAAACTATACAGGAACATTTGACCTAACAAAAACCACTGGGTaGCATCTACCAGAAGTATCACTGCAGAGGATTACTCGACAAAAA +
Preference number: 1 (lower is better)
Translates to: CKNYTGTFDLTKTTG*HLPEVSLQRITRQK
Trigger: TTTTTGTCGAGTAATCCTCTGCAGTGATACTTCTGGTAGATGTCACCCAGTGGTTTTTGTTAGGTCAAATGTTCCTGTATAGTTTTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR TCA 90 bp ATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGAGTaGACTCCCATTCACAACTGCCTCAAAGAGAATAAAATACCTAGG +
Preference number: 1 (lower is better)
Translates to: ILIHQQQTNREPNHE*TPIHNCLKENKIPR
Trigger: CCTAGGTATTTTATTCTCTTTGAGGCAGTTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 90 bp TTCTTTGAAACCAACGAGAACAAAGACACAACATACCAGAATCTCTaGGACACATTTAAAGCAGTGTGTAGAGGGAAATTTACAGCACTA +
Preference number: 1 (lower is better)
Translates to: FFETNENKDTTYQNL*DTFKAVCRGKFTAL
Trigger: TAGTGCTGTAAATTTCCCTCTACACACTGCTTTAAATGTGTCCCAGAGATTCTGGTATGTTGTGTCTTTGTTCTCGTTGGTTTCAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 90 bp GCTCATCATCATGGGCCATCAGAGAAATGCAAATCAAAACCACAATaGGATACCATCTCACACCAGTTAGAATGTCAATCATTAAAAAGT +
Preference number: 1 (lower is better)
Translates to: AHHHGPSEKCKSKPQ*DTISHQLECQSLKS
Trigger: ACTTTTTAATGATTGACATTCTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGGCCCATGATGATGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 90 bp GTCTTTACAGGTGAGGTTTCTTGTAGGCAGCATACAGTCGAGTCATaGTGGTGGTTTTTAATCCATTCAGTCAATCTATATCTTTTAAGT +
Preference number: 1 (lower is better)
Translates to: VFTGEVSCRQHTVES*WWFLIHSVNLYLLS
Trigger: ACTTAAAAGATATAGATTGACTGAATGGATTAAAAACCACCATCATGACTCGACTGTATGCTGCCTACAAGAAACCTCACCTGTAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 90 bp GCTGTCAAACCTCTCTGTGGATATGCTGTGTTAACTTCTGAGCCTTaGGGATACCCATATTTACAATATGATAAATACATTAAGTCACAT +
Preference number: 1 (lower is better)
Translates to: AVKPLCGYAVLTSEP*GYPYLQYDKYIKSH
Trigger: ATGTGACTTAATGTATTTATCATATTGTAAATATGGGTATCCCCAAGGCTCAGAAGTTAACACAGCATATCCACAGAGAGGTTTGACAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 90 bp TTAAACAGTATACAGCTCTATTTGCAAAAACTATACAGGAACATTTaGCCTAACAAAAACCACTGGGTGACATCTACCAGAAGTATCACT +
Preference number: 1 (lower is better)
Translates to: LNSIQLYLQKLYRNI*PNKNHWVTSTRSIT
Trigger: AGTGATACTTCTGGTAGATGTCACCCAGTGGTTTTTGTTAGGTCAAATGTTCCTGTATAGTTTTTGCAAATAGAGCTGTATACTGTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR CCA 90 bp TGCAGGGAGTCTCCAAGTCCTAGGCTGGAGTCCCGACCCCGTTTGCTCTCAGGAGGACCCGATGATGTCTaGCCACCAGTGGACAGGCGC +
Preference number: 2 (lower is better)
Translates to: CRESPSPRLESRPRLLSGGPDDV*PPVDRR
Trigger: GCGCCTGTCCACTGGTGGCCAGACATCATCGGGTCC...TCCTGAGAGCAAACGGGGTCGGGACTCCAGCCTAGGACTTGGAGACTCCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR-3UTR CCA 90 bp CCGGGAAGGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCTGTGACCAAGATTGGAGGGTTTaGACTCCCAGCCTCAACCCC +
Preference number: 2 (lower is better)
Translates to: PGRQGVREFPFLAKGSCDQDWRV*TPSLNP
Trigger: GGGGTTGAGGCTGGGAGTCCAAACCCTCCAATCTTG...GTCACAGCTTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGCCTTCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 90 bp GGGTCACGGGAACCCCACTTTATAGCCAGTCAGAAGTATAGGGACTaGCGATTGGTATCTGGAGTGGGGGCAGTCTTGTGGGCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: GSREPHFIASQKYRD*RLVSGVGAVLWAEP
Trigger: GGGCTCAGCCCACAAGACTGCCCCCACTCCAGATACCAATCGCAAGTCCCTATACTTCTGACTGGCTATAAAGTGGGGTTCCCGTGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR TCA 90 bp GTCCTAGGCTGGAGTCCCGACCCCGTTTGCTCTCAGGAAGATGACAAGGACCATGCTGGCACACCTACCTaGGAGACCAAACATTTCCCC +
Preference number: 2 (lower is better)
Translates to: VLGWSPDPVCSQEDDKDHAGTPT*ETKHFP
Trigger: GGGGAAATGTTTGGTCTCTCAGGTAGGTGTGCCAGC...ATGGTCCTTGTCATCTTCCTGAGAGCAAACGGGGTCGGGACTCCAGCCTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR-3UTR TCA 90 bp CCGGGAAGGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCTGTGACGGTTTGCCAATGAAATaGTTGGTGGCTGGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: PGRQGVREFPFLAKGSCDGLPMK*LVAGSL
Trigger: GAGGCTCCCAGCCACCAATCATTTCATTGGCAAACC...GTCACAGCTTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGCCTTCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR TCA 90 bp CCGGGAAGGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCTGTGACTGCTGTGTTAACTTCTaGGCCTTGGGGATACCCATA +
Preference number: 2 (lower is better)
Translates to: PGRQGVREFPFLAKGSCDCCVNF*ALGIPI
Trigger: TATGGGTATCCCCAAGGCTCAGAAGTTAACACAGCA...GTCACAGCTTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGCCTTCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR TCA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCAAGCCAACCCCAACCTaGGCCTTGGACACCAACAGA +
Preference number: 2 (lower is better)
Translates to: LETSLTRAPELLFRNPDPKPTPT*ALDTNR
Trigger: TCTGTTGGTGTCCAAGGCTCAGGTTGGGGTTGGCTT...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000546260.5
3UTR-3UTR GCA 90 bp TGGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCTCCGGTCGCGCCACTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: WKTVWRFLRDLELEIPFDLRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGCGCGACCGGAG...GTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CCA 90 bp CCGGGAAGGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCTGTGACAACCACTCAGCTACATaGAAACTGAACAACCTGCTC +
Preference number: 2 (lower is better)
Translates to: PGRQGVREFPFLAKGSCDNHSAT*KLNNLL
Trigger: GAGCAGGTTGTTCAGTTTCCATGTAGCTGAGTGGTT...GTCACAGCTTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGCCTTCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCCCCCAACCTGAGCCTTaGACACCAACAGATGCAGCC +
Preference number: 2 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFPQPEP*TPTDAA
Trigger: GGCTGCATCTGTTGGTGTCCAAGGCTCAGGTTGGGG...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546260.5
3UTR CAA 90 bp TGTCTGACAGCTTTGAAGAGACCAGTGGTTCTCCCAGCACAGAGTTaGAGATCTGAGAACGGAGAGACTGCCTCCTCAAGTGAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: CLTALKRPVVLPAQS*RSENGETASSSESL
Trigger: CAGGGACTCACTTGAGGAGGCAGTCTCTCCGTTCTCAGATCTCAAACTCTGTGCTGGGAGAACCACTGGTCTCTTCAAAGCTGTCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR GCA 90 bp TGTTATTTCCTAAATCACGGGGCCTTTTCCCGTAATTCAAGGTTCGTCTGTCTCCGCTCTCAGCCCTCCTaGAAACGGCTGGCACACCTA +
Preference number: 2 (lower is better)
Translates to: CYFLNHGAFSRNSRFVCLRSQPS*KRLAHL
Trigger: TAGGTGTGCCAGCCGTTTGCAGGAGGGCTGAGAGCG...GAGACAGACGAACCTTGAATTACGGGAAAAGGCCCCGTGATTTAGGAAATAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR CAA 90 bp TCTAAAAATCAGAGCGCCTCTCCCCCTCCAAAGGAACATAGCTCCTaGCCAGCAACAGAACAAAGCTGGACGGAGAATGACTTTGACGAG +
Preference number: 2 (lower is better)
Translates to: SKNQSASPPPKEHSS*PATEQSWTENDFDE
Trigger: CTCGTCAAAGTCATTCTCCGTCCAGCTTTGTTCTGTTGCTGGCAAGGAGCTATGTTCCTTTGGAGGGGGAGAGGCGCTCTGATTTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 90 bp GGCAGCAGAAATCTCTGCAGACTTCAATGTCCCTGTCTGACAGCTTaGAAGAGACCAGTGGTTCTCCCAGCACAGAGTTTGAGATCTGAG +
Preference number: 2 (lower is better)
Translates to: GSRNLCRLQCPCLTA*KRPVVLPAQSLRSE
Trigger: CTCAGATCTCAAACTCTGTGCTGGGAGAACCACTGGTCTCTTCAAAGCTGTCAGACAGGGACATTGAAGTCTGCAGAGATTTCTGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR TCA 90 bp ATTTGTTATTTCCTAAATCACGGGGCCTTTTCCCGTAATTCAAGGTTCGTCTGTCACCTGCGGACCCGATaGTGTCTGGCCACCAGTGGA +
Preference number: 2 (lower is better)
Translates to: ICYFLNHGAFSRNSRFVCHLRTR*CLATSG
Trigger: TCCACTGGTGGCCAGACATCATCGGGTCCGCAGGTG...ACAGACGAACCTTGAATTACGGGAAAAGGCCCCGTGATTTAGGAAATAACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR-3UTR TCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCATTGGGTCTCAAGCATaGGCTGCCCAATTCTCCTTG +
Preference number: 2 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFIGSQA*AAQFSL
Trigger: CAAGGAGAATTGGGCAGCTCATGCTTGAGACCCAAT...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR CCA 90 bp CCGGGAAGGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCTGTGACCCATCAATGATAGATTaGTTTAAGAAGATGTGGCAC +
Preference number: 2 (lower is better)
Translates to: PGRQGVREFPFLAKGSCDPSMID*FKKMWH
Trigger: GTGCCACATCTTCTTAAACCAATCTATCATTGATGG...GTCACAGCTTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGCCTTCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CCA 90 bp CCGGGAAGGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCTGTGACAAACACCAAAAGCAATaGCAACAGAAGCCAAAATTG +
Preference number: 2 (lower is better)
Translates to: PGRQGVREFPFLAKGSCDKHQKQ*QQKPKL
Trigger: CAATTTTGGCTTCTGTTGCCATTGCTTTTGGTGTTT...GTCACAGCTTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGCCTTCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CCA 90 bp CCGGGAAGGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCTGTGACCAATATCAGACTGAATaGGCAAAAACTGGAAGCATT +
Preference number: 2 (lower is better)
Translates to: PGRQGVREFPFLAKGSCDQYQTE*AKTGSI
Trigger: AATGCTTCCAGTTTTTGCCCATTCAGTCTGATATTG...GTCACAGCTTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGCCTTCCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 90 bp ACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTaGGAAGTTCTGGCCAGGGCCATCAGGCAGGAGAAAGAAATAAAG +
Preference number: 2 (lower is better)
Translates to: TRQGCPLSPLLFNIV*EVLARAIRQEKEIK
Trigger: CTTTATTTCTTTCTCCTGCCTGATGGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR TCA 90 bp TGGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACGGTGGGTGGATGACTTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: WKTVWRFLRDLELEIPFDGGWMT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAGTCATCCACCCACC...GTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR GCA 90 bp ACTTCAAACACAATCAGGCTGAAATACTGCATTTTTCCACTAGATGCCTCCAGTCACACCACAACGGTGTaGCTCCTCCTCTCCCACCTG +
Preference number: 2 (lower is better)
Translates to: TSNTIRLKYCIFPLDASSHTTTV*LLLSHL
Trigger: CAGGTGGGAGAGGAGGAGGCACACCGTTGTGGTGTG...ACTGGAGGCATCTAGTGGAAAAATGCAGTATTTCAGCCTGATTGTGTTTGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR-3UTR CCA 90 bp TCTCTCCCCATTACATGTTTCCCAAATTTGTTATTTCCTAAATCACGGGGCCTTATGTCTGGCCACCAGTaGACAGGCGCTCTCAGCCCT +
Preference number: 2 (lower is better)
Translates to: SLPITCFPNLLFPKSRGLMSGHQ*TGALSP
Trigger: AGGGCTGAGAGCGCCTGTCCACTGGTGGCCAGACAT...AAGGCCCCGTGATTTAGGAAATAACAAATTTGGGAAACATGTAATGGGGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR-3UTR CCA 90 bp CTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCCATCAGGCACCAATTCTCCTTGCTTaGCGCCCTGCAAATAAACAT +
Preference number: 2 (lower is better)
Translates to: LTTPIQHSVGSSGQGHQAPILLA*RPANKH
Trigger: ATGTTTATTTGCAGGGCGCCAAGCAAGGAGAATTGG...TGCCTGATGGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR TCA 90 bp ATTTGTTATTTCCTAAATCACGGGGCCTTTTCCCGTAATTCAAGGTTCGTCTGTTCCTCCTCTCCCACCTaGAGTCAAGTGGGCTCAGTG +
Preference number: 2 (lower is better)
Translates to: ICYFLNHGAFSRNSRFVCSSSPT*SQVGSV
Trigger: CACTGAGCCCACTTGACTTCAGGTGGGAGAGGAGGA...ACAGACGAACCTTGAATTACGGGAAAAGGCCCCGTGATTTAGGAAATAACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR-3UTR TCA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCACAAAAACCACTGGGTaGCATCTACCAGAAGTATCA +
Preference number: 2 (lower is better)
Translates to: LETSLTRAPELLFRNPDPTKTTG*HLPEVS
Trigger: TGATACTTCTGGTAGATGTCACCCAGTGGTTTTTGT...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR GCA 90 bp CCCCTAAGGGAAATCAAGAAAAGTATCAAGTCTAAAGATCCTGAACTGTTCCACCAGGGTAGCTGGGGATaGAGGGAGTCTCCAAGTCCT +
Preference number: 2 (lower is better)
Translates to: PLREIKKSIKSKDPELFHQGSWG*RESPSP
Trigger: AGGACTTGGAGACTCCCTGCATCCCCAGCTACCCTG...GTGGAACAGTTCAGGATCTTTAGACTTGATACTTTTCTTGATTTCCCTTAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR-3UTR GCA 90 bp CTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCCATCAGGCATTTGCTGTTGAAGTTTaGCTTTACTGTGCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: LTTPIQHSVGSSGQGHQAFAVEV*LYCAGE
Trigger: CTCACCTGCACAGTAAAGGCAAACTTCAACAGCAAA...TGCCTGATGGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCGCTTGTAGGTCATCATaGAGATTGGGTCTCAAGCAT +
Preference number: 2 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFACRSS*RLGLKH
Trigger: ATGCTTGAGACCCAATCTCCATGATGACCTACAAGC...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR CAA 90 bp GGAACACTTTTACACTGGTGGTGGGACTGTAAACTAGTTCAACCATaGTGGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAA +
Preference number: 2 (lower is better)
Translates to: GTLLHWWWDCKLVQP*WKTVWRFLRDLELE
Trigger: TTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCACAATGGTTGAACTAGTTTACAGTCCCACCACCAGTGTAAAAGTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR TCA 90 bp ACAATCAGGCTGAAATACTGCATTTTTCCACTAGATGCCTCCAGTCAACAAGATGTCAAGTGGGCTCAGTaGAGTTTCACCTGCAGGGTA +
Preference number: 2 (lower is better)
Translates to: TIRLKYCIFPLDASSQQDVKWAQ*SFTCRV
Trigger: TACCCTGCAGGTGAAACTTCACTGAGCCCACTTGAC...ATCTTGTTGACTGGAGGCATCTAGTGGAAAAATGCAGTATTTCAGCCTGATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR-3UTR TCA 90 bp GAACTTCCCCAATCTAGCAAGGGAGGACAACATTCAAATTCAGGAAATACAGAGCCAGGGACTAAACTCTaGCCTCCATTCTTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: ELPQSSKGGQHSNSGNTEPGTKL*PPFFAL
Trigger: GAGAGCAAAGAATGGAGGTCAGAGTTTAGTCCCTGG...CTCTGTATTTCCTGAATTTGAATGTTGTCCTCCCTTGCTAGATTGGGGAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR TCA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCAATAAAGGAGAATCTTaGGTTTCCTTCACCGAAAAC +
Preference number: 2 (lower is better)
Translates to: LETSLTRAPELLFRNPDPNKGES*VSFTEN
Trigger: GTTTTCGGTGAAGGAAACTCAAGATTCTCCTTTATT...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR GCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCTACCAGAAGTATCACTaGAGAGGATTACTCGACAAA +
Preference number: 2 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFYQKYH*RGLLDK
Trigger: TTTGTCGAGTAATCCTCTGCAGTGATACTTCTGGTA...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR TCA 90 bp CTTGCCCGTCTATTTAAACAGTCACGACCTTCCTTAGAGAGGCAAGCAGTAATCTTGCAGTTTTGCTGTTaGAGTTTGCCTTTACTGTGC +
Preference number: 2 (lower is better)
Translates to: LARLFKQSRPSLERQAVILQFCC*SLPLLC
Trigger: GCACAGTAAAGGCAAACTTCAACAGCAAAACTGCAA...GATTACTGCTTGCCTCTCTAAGGAAGGTCGTGACTGTTTAAATAGACGGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR TCA 90 bp AAGCACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTTGTTTAAAGGATATTCCACCTGTGGGATCTaGCTCCAATTCCAGGTAGAC +
Preference number: 2 (lower is better)
Translates to: KHYQQVYPTGWRTLFKGYSTCGI*LQFQVD
Trigger: GTCTACCTGGAATTGGAGTCAGATCCCACAGGTGGA...ATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR GCA 90 bp CTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCCATCAGGCAACTCCCATTCACAACTaGCTCAAAGAGAATAAAATA +
Preference number: 2 (lower is better)
Translates to: LTTPIQHSVGSSGQGHQATPIHN*LKENKI
Trigger: TATTTTATTCTCTTTGAGGCAGTTGTGAATGGGAGT...TGCCTGATGGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CCA 90 bp TATTTCCTAAATCACGGGGCCTTTTCCCGTAATTCAAGGTTCGTCTGTCTCAAGAAGTCCACATACCCCTaGTTTTATCAACCGAGCTCT +
Preference number: 2 (lower is better)
Translates to: YFLNHGAFSRNSRFVCLKKSTYP*FYQPSS
Trigger: AGAGCTCGGTTGATAAAACCAGGGGTATGTGGACTT...CTTGAGACAGACGAACCTTGAATTACGGGAAAAGGCCCCGTGATTTAGGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR-3UTR CCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCAGTGATTTACAATTTTaGTATACAGCCATACCACCC +
Preference number: 2 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFSDLQF*YTAIPP
Trigger: GGGTGGTATGGCTGTATACCAAAATTGTAAATCACT...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR CCA 90 bp TGGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACTACTGGGTGCAACAATaGGACACACTGAAAGATGAC +
Preference number: 2 (lower is better)
Translates to: WKTVWRFLRDLELEIPFDYWVQQ*DTLKDD
Trigger: GTCATCTTTCAGTGTGTCCCATTGTTGCACCCAGTA...GTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CCA 90 bp TGTAGAGGGAAATTTACAGCACTAAGTGCCCACAAGAGAAAGCAGGAAAGATCTTGGTGCTGGGAAAACTaGCTAGCCACATGTAGAAAG +
Preference number: 2 (lower is better)
Translates to: CRGKFTALSAHKRKQERSWCWEN*LATCRK
Trigger: CTTTCTACATGTGGCTAGCCAGTTTTCCCAGCACCA...AGATCTTTCCTGCTTTCTCTTGTGGGCACTTAGTGCTGTAAATTTCCCTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CCA 90 bp CTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCCATCAGGCAAACATTCCATGCTCATaGATAGGAAGAATCAATATC +
Preference number: 2 (lower is better)
Translates to: LTTPIQHSVGSSGQGHQANIPCS*IGRINI
Trigger: GATATTGATTCTTCCTATCCATGAGCATGGAATGTT...TGCCTGATGGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR TCA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATGCACCCGATCTCGACTaGTTTACAATTTTGCCTTTA +
Preference number: 2 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNAPDLD*FTILPL
Trigger: TAAAGGCAAAATTGTAAATCAGTCGAGATCGGGTGC...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR TCA 90 bp GAGAAGGAAACCAGCAAGCTGATAAGCAAGAAGGTCATAACAGTTTCAAACAATCTTAACACGTGCCCCTaGGCTACTTTTCAGAAACCC +
Preference number: 2 (lower is better)
Translates to: EKETSKLISKKVITVSNNLNTCP*ATFQKP
Trigger: GGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAG...ATTGTTTGAAACTGTTATGACCTTCTTGCTTATCAGCTTGCTGGTTTCCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR TCA 90 bp GAACTTCCCCAATCTAGCAAGGGAGGACAACATTCAAATTCAGGAAATACAGAGCCACATGTAGAAAGCTaGAACTGGATCCCTTCCTTA +
Preference number: 2 (lower is better)
Translates to: ELPQSSKGGQHSNSGNTEPHVES*NWIPSL
Trigger: TAAGGAAGGGATCCAGTTTCAGCTTTCTACATGTGG...CTCTGTATTTCCTGAATTTGAATGTTGTCCTCCCTTGCTAGATTGGGGAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR TCA 90 bp AAGCACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTTGTTTAAAGGATATGGTACCCCTCTGAGATaGAGCTTCCAGAGGAATGAT +
Preference number: 2 (lower is better)
Translates to: KHYQQVYPTGWRTLFKGYGTPLR*SFQRND
Trigger: ATCATTCCTCTGGAAGCTTCATCTCAGAGGGGTACC...ATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR GCA 90 bp GAGAAGGAAACCAGCAAGCTGATAAGCAAGAAGGTCATAACAGTTTCAAACAATGTCTCAAGCATGAGCTaGCCAATTCTCCTTGCTTGG +
Preference number: 2 (lower is better)
Translates to: EKETSKLISKKVITVSNNVSSMS*PILLAW
Trigger: CCAAGCAAGGAGAATTGGGCAGCTCATGCTTGAGAC...ATTGTTTGAAACTGTTATGACCTTCTTGCTTATCAGCTTGCTGGTTTCCTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR CCA 90 bp CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAGTCCACTGGACAACCTaGTGTAAAAGTATTGAGTGG +
Preference number: 2 (lower is better)
Translates to: LELEIPFDPAIPLLGIYPVHWTT*CKSIEW
Trigger: CCACTCAATACTTTTACACCAGGTTGTCCAGTGGAC...TGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CCA 90 bp CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGAACCTCATGTCCTaGGACTTCATGGAGCACAAA +
Preference number: 2 (lower is better)
Translates to: LELEIPFDPAIPLLGIYPKNLMS*DFMEHK
Trigger: TTTGTGCTCCATGAAGTCCCAGGACATGAGGTTCTT...TGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CCA 90 bp AAGCACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTTGTTTAAAGGATATCGGCACCTGGAAAATTaGGTCACTCCCACCCTAATA +
Preference number: 2 (lower is better)
Translates to: KHYQQVYPTGWRTLFKGYRHLEN*VTPTLI
Trigger: TATTAGGGTGGGAGTGACCCAATTTTCCAGGTGCCG...ATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR TCA 90 bp AAGCACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTTGTTTAAAGGATATGTCCCAGAAGCATCTTaGCAACAGAAGCACTCTCAT +
Preference number: 2 (lower is better)
Translates to: KHYQQVYPTGWRTLFKGYVPEAS*QQKHSH
Trigger: ATGAGAGTGCTTCTGTTGTCAAGATGCTTCTGGGAC...ATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR TCA 90 bp TGTAGAGGGAAATTTACAGCACTAAGTGCCCACAAGAGAAAGCAGGAAAGATCTAACAATGGGACACACTaGAAGATGACTAGCATGTCA +
Preference number: 2 (lower is better)
Translates to: CRGKFTALSAHKRKQERSNNGTH*KMTSMS
Trigger: TGACATGCTAGTCATCTTTCAGTGTGTCCCATTGTT...AGATCTTTCCTGCTTTCTCTTGTGGGCACTTAGTGCTGTAAATTTCCCTCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR TCA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATAACCAAAGTCACGTTTaGTGGCTTCCAGCAACTCCC +
Preference number: 2 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDNQSHV*WLPATP
Trigger: GGGAGTTGCTGGAAGCCATCAAACGTGACTTTGGTT...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546260.5
3UTR-3UTR GCA 90 bp TGTTATTTCCTAAATCACGGGGCCTTTTCCCGTAATTCAAGGTTCGTCTGTCTCATCAGGCTGAAATACTaGATTTTTCCACTAGATGCC +
Preference number: 2 (lower is better)
Translates to: CYFLNHGAFSRNSRFVCLIRLKY*IFPLDA
Trigger: GGCATCTAGTGGAAAAATGCAGTATTTCAGCCTGAT...GAGACAGACGAACCTTGAATTACGGGAAAAGGCCCCGTGATTTAGGAAATAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR-3UTR GCA 90 bp GAACTTCCCCAATCTAGCAAGGGAGGACAACATTCAAATTCAGGAAATACAGAGCCTCCTTTCTCCTACTaGAAAAACCACCTTTTTGCA +
Preference number: 2 (lower is better)
Translates to: ELPQSSKGGQHSNSGNTEPPFSY*KNHLFA
Trigger: TGCAAAAAGGTGGTTTTTGCAGTAGGAGAAAGGAGG...CTCTGTATTTCCTGAATTTGAATGTTGTCCTCCCTTGCTAGATTGGGGAAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR GCA 90 bp CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCATATTGTCTCAATCCTTaGTTGGTCTCTTGGCTCCTA +
Preference number: 2 (lower is better)
Translates to: LELEIPFDPAIPLLGIYPYCLNP*LVSWLL
Trigger: TAGGAGCCAAGAGACCAAGCAAGGATTGAGACAATA...TGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR GCA 90 bp TGTAGAGGGAAATTTACAGCACTAAGTGCCCACAAGAGAAAGCAGGAAAGATCTCTTAATGTTCCTTTCTaGGGACCCCAAGTTTTTAGA +
Preference number: 2 (lower is better)
Translates to: CRGKFTALSAHKRKQERSLNVPF*GPQVFR
Trigger: TCTAAAAACTTGGGGTCCGCAGAAAGGAACATTAAG...AGATCTTTCCTGCTTTCTCTTGTGGGCACTTAGTGCTGTAAATTTCCCTCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR GCA 90 bp GAACTTCCCCAATCTAGCAAGGGAGGACAACATTCAAATTCAGGAAATACAGAGCTAGAAGAAAACCTATaGAGTACCATTCAGGACACA +
Preference number: 2 (lower is better)
Translates to: ELPQSSKGGQHSNSGNTELEENL*STIQDT
Trigger: TGTGTCCTGAATGGTACTGCATAGGTTTTCTTCTAG...CTCTGTATTTCCTGAATTTGAATGTTGTCCTCCCTTGCTAGATTGGGGAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CCA 90 bp ACTTCAAACACAATCAGGCTGAAATACTGCATTTTTCCACTAGATGCCTCCAGTATGTGTAACGGAATGTaGCTCACAACAGTAAGGCAA +
Preference number: 2 (lower is better)
Translates to: TSNTIRLKYCIFPLDASSMCNGM*LTTVRQ
Trigger: TTGCCTTACTGTTGTGAGCCACATTCCGTTACACAT...ACTGGAGGCATCTAGTGGAAAAATGCAGTATTTCAGCCTGATTGTGTTTGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR-3UTR CCA 90 bp CTGCAGAGGATTACTCGACAAAAAGTGCAATTTTCTATAGAAAGCCGAGTGTTTGCTTGTAGGTCATCATaGAGATTGGGTCTCAAGCAT +
Preference number: 2 (lower is better)
Translates to: LQRITRQKVQFSIESRVFACRSS*RLGLKH
Trigger: ATGCTTGAGACCCAATCTCCATGATGACCTACAAGC...AAACACTCGGCTTTCTATAGAAAATTGCACTTTTTGTCGAGTAATCCTCTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR CCA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAACAGACCCCCACCAAATaGATTCACACAGACGTCAGA +
Preference number: 2 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSEQTPTK*IHTDVR
Trigger: TCTGACGTCTGTGTGAATCCATTTGGTGGGGGTCTG...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR CCA 90 bp TGGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACTGGTTTAAGAAGATGTaGCACATATACACCATGGAA +
Preference number: 2 (lower is better)
Translates to: WKTVWRFLRDLELEIPFDWFKKM*HIYTME
Trigger: TTCCATGGTGTATATGTGCCACATCTTCTTAAACCA...GTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR GCA 90 bp ATTTGTTATTTCCTAAATCACGGGGCCTTTTCCCGTAATTCAAGGTTCGTCTGTCATTTTTCCACTAGATaGCTCCAGTCAACAAGATGT +
Preference number: 2 (lower is better)
Translates to: ICYFLNHGAFSRNSRFVCHFSTR*LQSTRC
Trigger: ACATCTTGTTGACTGGAGGCATCTAGTGGAAAAATG...ACAGACGAACCTTGAATTACGGGAAAAGGCCCCGTGATTTAGGAAATAACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR-3UTR CCA 90 bp CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAGCCGAGTGTTTCCCTTaGGAAAGTGTTAATATTTTA +
Preference number: 2 (lower is better)
Translates to: LELEIPFDPAIPLLGIYPAECFP*ESVNIL
Trigger: TAAAATATTAACACTTTCCCAAGGGAAACACTCGGC...TGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CCA 90 bp GAACTTCCCCAATCTAGCAAGGGAGGACAACATTCAAATTCAGGAAATACAGAGCTCCTGAATGACTACTaGGTACATAACAAAATGAAG +
Preference number: 2 (lower is better)
Translates to: ELPQSSKGGQHSNSGNTELLNDY*VHNKMK
Trigger: CTTCATTTTGTTATGTACCCAGTAGTCATTCAGGAG...CTCTGTATTTCCTGAATTTGAATGTTGTCCTCCCTTGCTAGATTGGGGAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR TCA 90 bp CTGCAGAGGATTACTCGACAAAAAGTGCAATTTTCTATAGAAAGCCGAGTGTTTCTATACAGGAACATTTaGCCTAACAAAAACCACTGG +
Preference number: 2 (lower is better)
Translates to: LQRITRQKVQFSIESRVFLYRNI*PNKNHW
Trigger: CCAGTGGTTTTTGTTAGGTCAAATGTTCCTGTATAG...AAACACTCGGCTTTCTATAGAAAATTGCACTTTTTGTCGAGTAATCCTCTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR GCA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAACTGACCTCCATTCTTTaGTCTCAGTTTCTTCCTGAG +
Preference number: 2 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSELTSIL*SQFLPE
Trigger: CTCAGGAAGAAACTGAGAGCAAAGAATGGAGGTCAG...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR CCA 90 bp AAGCACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTTGTTTAAAGGATATTGTCAAACCTCTCTGTaGATATGCTGTGTTAACTTC +
Preference number: 2 (lower is better)
Translates to: KHYQQVYPTGWRTLFKGYCQTSL*ICCVNF
Trigger: GAAGTTAACACAGCATATCCACAGAGAGGTTTGACA...ATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CCA 90 bp AAGCACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTTGTTTAAAGGATATAGTGATTTACAATTTTaGTATACAGCCATACCACCC +
Preference number: 2 (lower is better)
Translates to: KHYQQVYPTGWRTLFKGYSDLQF*YTAIPP
Trigger: GGGTGGTATGGCTGTATACCAAAATTGTAAATCACT...ATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 90 bp CATAAAGAGCTTAACATACTCAGCATAACGATCGTGGTTTACTTTTaGCAAGCCATGTATCTTTCAGTTACATTCTCCCAGTTGATTACA +
Preference number: 2 (lower is better)
Translates to: HKELNILSITIVVYF*QAMYLSVTFSQLIT
Trigger: TGTAATCAACTGGGAGAATGTAACTGAAAGATACATGGCTTGCAAAAAGTAAACCACGATCGTTATGCTGAGTATGTTAAGCTCTTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546260.5
3UTR-3UTR TCA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAACTATACAGGAACATTTaGCCTAACAAAAACCACTGG +
Preference number: 2 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSELYRNI*PNKNHW
Trigger: CCAGTGGTTTTTGTTAGGTCAAATGTTCCTGTATAG...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR GCA 90 bp GAGAAGGAAACCAGCAAGCTGATAAGCAAGAAGGTCATAACAGTTTCAAACAATTTTGCCTTTAACTTCTaGTTTCCTGAAATTTACCAC +
Preference number: 2 (lower is better)
Translates to: EKETSKLISKKVITVSNNFAFNF*FPEIYH
Trigger: GTGGTAAATTTCAGGAAAGCAGAAGTTAAAGGCAAA...ATTGTTTGAAACTGTTATGACCTTCTTGCTTATCAGCTTGCTGGTTTCCTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR CCA 90 bp AAGCACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTTGTTTAAAGGATATGATGATGAAACAACATaGCAAATGTATGATGCTAAG +
Preference number: 2 (lower is better)
Translates to: KHYQQVYPTGWRTLFKGYDDETT*QMYDAK
Trigger: CTTAGCATCATACATTTGCCATGTTGTTTCATCATC...ATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CCA 90 bp AAGCACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTTGTTTAAAGGATATACAGCAAAAACACTTTaGTTTTGTCGTATATCCCTA +
Preference number: 2 (lower is better)
Translates to: KHYQQVYPTGWRTLFKGYTAKTL*FCRISL
Trigger: TAGGGATATACGACAAAACCAAAGTGTTTTTGCTGT...ATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 72 bp CGAACTAGGTGGAGCCCACTGCAGCTCAAGGAGGCCTaGCTGCCTGCCTCTGTAGACTCCACCTCTGGGGGC +
Preference number: 3 (lower is better)
Translates to: RTRWSPLQLKEA*LPASVDSTSGG
Trigger: GCCCCCAGAGGTGGAGTCTACAGAGGCAGGCAGGCAGGCCTCCTTGAGCTGCAGTGGGCTCCACCTAGTTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp GGTGACCCTGACACTCAGAGACACCTGCGGACCCGATaGTGTCTGGCCACCAGTGGACAGGCGCTCTCAGCC +
Preference number: 3 (lower is better)
Translates to: GDPDTQRHLRTR*CLATSGQALSA
Trigger: GGCTGAGAGCGCCTGTCCACTGGTGGCCAGACATCATCGGGTCCGCAGGTGTCTCTGAGTGTCAGGGTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR CCA 72 bp CTGACACTCAGAGACACCTGCGGACCCGATGATGTCTaGCCACCAGTGGACAGGCGCTCTCAGCCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: LTLRDTCGPDDV*PPVDRRSQPSC
Trigger: GCAGGAGGGCTGAGAGCGCCTGTCCACTGGTGGCCAGACATCATCGGGTCCGCAGGTGTCTCTGAGTGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR CCA 72 bp CAGCCCACTGAGCATGAGCTGAAGCAGGGCAAGGCATaGCCTCACCCGGGAAGGCAAGGGGTCAGGGAATTC +
Preference number: 3 (lower is better)
Translates to: QPTEHELKQGKA*PHPGRQGVREF
Trigger: GAATTCCCTGACCCCTTGCCTTCCCGGGTGAGGCCATGCCTTGCCCTGCTTCAGCTCATGCTCAGTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp CTCACTGGGGCTTGTTGGACAGTGGGTGTAGGACGGTaGGTGCAGCCCACTGAGCATGAGCTGAAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: LTGACWTVGVGR*VQPTEHELKQG
Trigger: GCCCTGCTTCAGCTCATGCTCAGTGGGCTGCACCCACCGTCCTACACCCACTGTCCAACAAGCCCCAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp GGAGGCCTGCCTGCCTGCCTCTGTAGACTCCACCTCTaGGGGCATGGCATAGCCGAACAAAAGGCAGCAGAA +
Preference number: 3 (lower is better)
Translates to: GGLPACLCRLHL*GHGIAEQKAAE
Trigger: TTCTGCTGCCTTTTGTTCGGCTATGCCATGCCCCCAGAGGTGGAGTCTACAGAGGCAGGCAGGCAGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 72 bp GGCTCAGTGAAGTTTCACCTGCAGGGTAGCTGGGGATaGAGGGAGTCTCCAAGTCCTAGGCTGGAGTCCCGA +
Preference number: 3 (lower is better)
Translates to: GSVKFHLQGSWG*RESPSPRLESR
Trigger: TCGGGACTCCAGCCTAGGACTTGGAGACTCCCTGCATCCCCAGCTACCCTGCAGGTGAAACTTCACTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR CCA 72 bp GTAGCTGGGGATGCAGGGAGTCTCCAAGTCCTAGGCTaGAGTCCCGACCCCGTTTGCTCTCAGGAAGATGAC +
Preference number: 3 (lower is better)
Translates to: VAGDAGSLQVLG*SPDPVCSQEDD
Trigger: GTCATCTTCCTGAGAGCAAACGGGGTCGGGACTCCAGCCTAGGACTTGGAGACTCCCTGCATCCCCAGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR TCA 72 bp CGCACACCACAACGGTGTGCCTCCTCCTCTCCCACCTaGAGTCAAGTGGGCTCAGTGAAGTTTCACCTGCAG +
Preference number: 3 (lower is better)
Translates to: RTPQRCASSSPT*SQVGSVKFHLQ
Trigger: CTGCAGGTGAAACTTCACTGAGCCCACTTGACTTCAGGTGGGAGAGGAGGAGGCACACCGTTGTGGTGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR TCA 72 bp GCGATTGGTATCTGGAGTGGGGGCAGTCTTGTGGGCTaGGCCCTCCACCTGTGGGATCTGACTCCAATTCCA +
Preference number: 3 (lower is better)
Translates to: AIGIWSGGSLVG*ALHLWDLTPIP
Trigger: TGGAATTGGAGTCAGATCCCACAGGTGGAGGGCTCAGCCCACAAGACTGCCCCCACTCCAGATACCAATCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp GGGCAGACTGACACCCCACATGGCCGGGTACCCCTCTaGGATGAAGCTTCCAGAGGAATGATCAGGCAGCAA +
Preference number: 3 (lower is better)
Translates to: GQTDTPHGRVPL*DEASRGMIRQQ
Trigger: TTGCTGCCTGATCATTCCTCTGGAAGCTTCATCTCAGAGGGGTACCCGGCCATGTGGGGTGTCAGTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 72 bp TTCTATCAGGAGGTGACCCTGACACTCAGAGACACCTaGGGACCCGATGATGTCTGGCCACCAGTGGACAGG +
Preference number: 3 (lower is better)
Translates to: FYQEVTLTLRDT*GPDDVWPPVDR
Trigger: CCTGTCCACTGGTGGCCAGACATCATCGGGTCCGCAGGTGTCTCTGAGTGTCAGGGTCACCTCCTGATAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR CCA 72 bp CAAGTGGGCTCAGTGAAGTTTCACCTGCAGGGTAGCTaGGGATGCAGGGAGTCTCCAAGTCCTAGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: QVGSVKFHLQGS*GCRESPSPRLE
Trigger: CTCCAGCCTAGGACTTGGAGACTCCCTGCATCCCCAGCTACCCTGCAGGTGAAACTTCACTGAGCCCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR TCA 72 bp AGGCTGGAGTCCCGACCCCGTTTGCTCTCAGGAAGATaGCAAGGACCATGGTTCCTAGCACGGAGTAGTGTC +
Preference number: 3 (lower is better)
Translates to: RLESRPRLLSGR*QGPWFLARSSV
Trigger: GACACTACTCCGTGCTAGGAACCATGGTCCTTGTCATCTTCCTGAGAGCAAACGGGGTCGGGACTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR CCA 72 bp GTCAGAAGTATAGGGACTTGCGATTGGTATCTGGAGTaGGGGCAGTCTTGTGGGCTGAGCCCTCCACCTGTG +
Preference number: 3 (lower is better)
Translates to: VRSIGTCDWYLE*GQSCGLSPPPV
Trigger: CACAGGTGGAGGGCTCAGCCCACAAGACTGCCCCCACTCCAGATACCAATCGCAAGTCCCTATACTTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp CCGAATAGGAACAGCTCCAGTCTACAGCTCCCAGCGTaGGCGACGCAGAAGACAGGTGATTTCTGCACTTCC +
Preference number: 3 (lower is better)
Translates to: PNRNSSSLQLPA*ATQKTGDFCTS
Trigger: GGAAGTGCAGAAATCACCTGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACTGGAGCTGTTCCTATTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CAA 90 bp CTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCCATCAGGCAGGAGGTTGCAGTGAGTaGAGACTGTGCCACCGCACT +
Preference number: 3 (lower is better)
Translates to: LTTPIQHSVGSSGQGHQAGGCSE*RLCHRT
Trigger: AGTGCGGTGGCACAGTCTCAACTCACTGCAACCTCC...TGCCTGATGGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp ATGAGCTTCTGGGTAGCTGATGACGTGGAGAGAGCATaGAAGCTCCATACCCCTTCCCACATGCCTTGCCCT +
Preference number: 3 (lower is better)
Translates to: MSFWVADDVERA*KLHTPSHMPCP
Trigger: AGGGCAAGGCATGTGGGAAGGGGTATGGAGCTTTCATGCTCTCTCCACGTCATCAGCTACCCAGAAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 72 bp TGGAGAGAGCATGAAAGCTCCATACCCCTTCCCACATaGCTTGCCCTGTGCATCTCTTCCATCTGGCTGTTC +
Preference number: 3 (lower is better)
Translates to: WREHESSIPLPT*LALCISSIWLF
Trigger: GAACAGCCAGATGGAAGAGATGCACAGGGCAAGGCATGTGGGAAGGGGTATGGAGCTTTCATGCTCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 72 bp AGAGCGCCTCTCCCCCTCCAAAGGAACATAGCTCCTTaGCAGCAACAGAACAAAGCTGGACGGAGAATGACT +
Preference number: 3 (lower is better)
Translates to: RAPLPLQRNIAP*QQQNKAGRRMT
Trigger: AGTCATTCTCCGTCCAGCTTTGTTCTGTTGCTGGCAAGGAGCTATGTTCCTTTGGAGGGGGAGAGGCGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp GCAGTCTTGTGGGCTGAGCCCTCCACCTGTGGGATCTaGCTCCAATTCCAGGTAGACAGTGTCAGAATTGAA +
Preference number: 3 (lower is better)
Translates to: AVLWAEPSTCGI*LQFQVDSVRIE
Trigger: TTCAATTCTGACACTGTCTACCTGGAATTGGAGTCAGATCCCACAGGTGGAGGGCTCAGCCCACAAGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp GCGACGCAGAAGACAGGTGATTTCTGCACTTCCAACTaGGGTACCAGGTTCATCTCACTGGGGCTTGTTGGA +
Preference number: 3 (lower is better)
Translates to: ATQKTGDFCTSN*GTRFISLGLVG
Trigger: TCCAACAAGCCCCAGTGAGATGAACCTGGTACCTCAGTTGGAAGTGCAGAAATCACCTGTCTTCTGCGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp TCTACAGCTCCCAGCGTGAGCGACGCAGAAGACAGGTaGTTTCTGCACTTCCAACTGAGGTACCAGGTTCAT +
Preference number: 3 (lower is better)
Translates to: STAPSVSDAEDR*FLHFQLRYQVH
Trigger: ATGAACCTGGTACCTCAGTTGGAAGTGCAGAAATCACCTGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CAA 90 bp CCGGGAAGGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCTGTGACCATACACACACCGCTTaGGTACTCTTGTCTCTAATA +
Preference number: 3 (lower is better)
Translates to: PGRQGVREFPFLAKGSCDHTHTA*VLLSLI
Trigger: TATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATG...GTCACAGCTTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGCCTTCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp CCCCCAACCTCCAGAAAGGGGAGAGAGGCTGAAGGTTaGGTTAATCGCCAATTGCCAATGGTAATGCTGACA +
Preference number: 3 (lower is better)
Translates to: PPTSRKGREAEG*VNRQLPMVMLT
Trigger: TGTCAGCATTACCATTGGCAATTGGCGATTAACTCAACCTTCAGCCTCTCTCCCCTTTCTGGAGGTTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp ATTATAGTGGGCAGAGAGGCAAACTTGGAATCACCGTaGCGCTGGGCATCGAGACTACTGGGTGCAACAATG +
Preference number: 3 (lower is better)
Translates to: IIVGREANLESP*RWASRLLGATM
Trigger: CATTGTTGCACCCAGTAGTCTCGATGCCCAGCGTCACGGTGATTCCAAGTTTGCCTCTCTGCCCACTATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp TGGGTCTCAAGCATGAGCTGCCCAATTCTCCTTGCTTaGCGCCCTGCAAATAAACATCCTCCTTTCTCCTAC +
Preference number: 3 (lower is better)
Translates to: WVSSMSCPILLA*RPANKHPPFSY
Trigger: GTAGGAGAAAGGAGGATGTTTATTTGCAGGGCGCCAAGCAAGGAGAATTGGGCAGCTCATGCTTGAGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR-3UTR CAA 90 bp CTTGCCCGTCTATTTAAACAGTCACGACCTTCCTTAGAGAGGCAAGCAGTAATCTCCAGCAACTCCCCTTaGGGTTCTCCACCACCGTTA +
Preference number: 3 (lower is better)
Translates to: LARLFKQSRPSLERQAVISSNSP*GSPPPL
Trigger: TAACGGTGGTGGAGAACCCAAAGGGGAGTTGCTGGA...GATTACTGCTTGCCTCTCTAAGGAAGGTCGTGACTGTTTAAATAGACGGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546260.5
3UTR TCA 72 bp AACTCTGACCTCCATTCTTTGCTCTCAGTTTCTTCCTaGGGGGCCTGGCCAGACCTTAATGTTCCTTTCTGC +
Preference number: 3 (lower is better)
Translates to: NSDLHSLLSVSS*GAWPDLNVPFC
Trigger: GCAGAAAGGAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGAGGTCAGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR TCA 72 bp GCCGGGTACCCCTCTGAGATGAAGCTTCCAGAGGAATaGTCAGGCAGCAACATTTGCTGTTCAGCAATATTC +
Preference number: 3 (lower is better)
Translates to: AGYPSEMKLPEE*SGSNICCSAIF
Trigger: GAATATTGCTGAACAGCAAATGTTGCTGCCTGATCATTCCTCTGGAAGCTTCATCTCAGAGGGGTACCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 72 bp GTAGGTCATCATGGAGATTGGGTCTCAAGCATGAGCTaGCCAATTCTCCTTGCTTGGCGCCCTGCAAATAAA +
Preference number: 3 (lower is better)
Translates to: VGHHGDWVSSMS*PILLAWRPANK
Trigger: TTTATTTGCAGGGCGCCAAGCAAGGAGAATTGGGCAGCTCATGCTTGAGACCCAATCTCCATGATGACCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR GCA 72 bp CTGGCACACTGGATAAAGAGTCAAGACCCATCAGGGTaGTGTATTCAGGAAACCCATCTCACGTACAGAGAC +
Preference number: 3 (lower is better)
Translates to: LAHWIKSQDPSG*CIQETHLTYRD
Trigger: GTCTCTGTACGTGAGATGGGTTTCCTGAATACAGCACCCTGATGGGTCTTGACTCTTTATCCAGTGTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp CAATTCACCAGTGCTGGCAATATGTGTAACGGAATGTaGCTCACAACAGTAAGGCAAGCTCCTTCGCAGGAC +
Preference number: 3 (lower is better)
Translates to: QFTSAGNMCNGM*LTTVRQAPSQD
Trigger: GTCCTGCGAAGGAGCTTGCCTTACTGTTGTGAGCCACATTCCGTTACACATATTGCCAGCACTGGTGAATTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR GCA 72 bp CCAGGTCTTCCAGTACCTAATTCAATGTTCTTTCCATaGCCACACAAAGGCAAGCAGCAGAAGGAGGAGCAA +
Preference number: 3 (lower is better)
Translates to: PGLPVPNSMFFP*PHKGKQQKEEQ
Trigger: TTGCTCCTCCTTCTGCTGCTTGCCTTTGTGTGGGCATGGAAAGAACATTGAATTAGGTACTGGAAGACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 72 bp GCATGGCATAGCCGAACAAAAGGCAGCAGAAATCTCTaGAGACTTCAATGTCCCTGTCTGACAGCTTTGAAG +
Preference number: 3 (lower is better)
Translates to: AWHSRTKGSRNL*RLQCPCLTALK
Trigger: CTTCAAAGCTGTCAGACAGGGACATTGAAGTCTGCAGAGATTTCTGCTGCCTTTTGTTCGGCTATGCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp CACTGGTGGTGGGACTGTAAACTAGTTCAACCATTGTaGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAA +
Preference number: 3 (lower is better)
Translates to: HWWWDCKLVQPL*KTVWRFLRDLE
Trigger: TTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCACAATGGTTGAACTAGTTTACAGTCCCACCACCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp AGTGGAATAAGGCCTGTTGTTCCTTGCAGTGGATCCTaGTTTGGACAAGCAGCAATTTGTAAGTGTCCCCGT +
Preference number: 3 (lower is better)
Translates to: SGIRPVVPCSGS*FGQAAICKCPR
Trigger: ACGGGGACACTTACAAATTGCTGCTTGTCCAAATCAGGATCCACTGCAAGGAACAACAGGCCTTATTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546260.5
3UTR GCA 72 bp CAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTaGCTTACAAGAGCTCCTGAAGGAAGCACTAAACAT +
Preference number: 3 (lower is better)
Translates to: QANAERFCHHQA*LTRAPEGSTKH
Trigger: ATGTTTAGTGCTTCCTTCAGGAGCTCTTGTAAGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp AGCAGCATATCAAAAAGCTTATCCACCATGATCAAGTaGGCTTCATCCCTGGGATGCAAGGCTGGTTCAACA +
Preference number: 3 (lower is better)
Translates to: SSISKSLSTMIK*ASSLGCKAGST
Trigger: TGTTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATATGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CAA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCCACCTTTTTGCAGTTTaGCTGTTGAAGTTTGCCTTT +
Preference number: 3 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFHLFAV*LLKFAF
Trigger: AAAGGCAAACTTCAACAGCAAAACTGCAAAAAGGTG...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR TCA 72 bp GATCTGACTCCAATTCCAGGTAGACAGTGTCAGAATTaGATTATAGGACATCCAGCTGGTGTCCACTGGACA +
Preference number: 3 (lower is better)
Translates to: DLTPIPGRQCQN*IIGHPAGVHWT
Trigger: TGTCCAGTGGACACCAGCTGGATGTCCTATAATTCAATTCTGACACTGTCTACCTGGAATTGGAGTCAGATC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp TCCTTAAATGACCTGATGGAGCTGAAAACCATGGCATaGGAACTACGTGACGAATGCACAAGCTTCAGTAGC +
Preference number: 3 (lower is better)
Translates to: SLNDLMELKTMA*ELRDECTSFSS
Trigger: GCTACTGAAGCTTGTGCATTCGTCACGTAGTTCTCATGCCATGGTTTTCAGCTCCATCAGGTCATTTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp CCACTGCCTTTAAATACTCTAGCTTGTAGGTCATCATaGAGATTGGGTCTCAAGCATGAGCTGCCCAATTCT +
Preference number: 3 (lower is better)
Translates to: PLPLNTLACRSS*RLGLKHELPNS
Trigger: AGAATTGGGCAGCTCATGCTTGAGACCCAATCTCCATGATGACCTACAAGCTAGAGTATTTAAAGGCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR TCA 72 bp AGACTACTGGGTGCAACAATGGGACACACTGAAAGATaGCTAGCATGTCATAGGAACTTGAAAGCATTCGTG +
Preference number: 3 (lower is better)
Translates to: RLLGATMGHTER*LACHRNLKAFV
Trigger: CACGAATGCTTTCAAGTTCCTATGACATGCTAGTCATCTTTCAGTGTGTCCCATTGTTGCACCCAGTAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp TTGTTTAATATTTGGATATGGGCCCAGACGCACAAATaGACAAGAACCTCATGTCCTGGGACTTCATGGAGC +
Preference number: 3 (lower is better)
Translates to: LFNIWIWAQTHK*TRTSCPGTSWS
Trigger: GCTCCATGAAGTCCCAGGACATGAGGTTCTTGTTCATTTGTGCGTCTGGGCCCATATCCAAATATTAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp CAGAACAAAGCTGGACGGAGAATGACTTTGACGAGTTaGGAGAAGAAGGCTTCAGATGATCAAACTTCTCCA +
Preference number: 3 (lower is better)
Translates to: QNKAGRRMTLTS*EKKASDDQTSP
Trigger: TGGAGAAGTTTGATCATCTGAAGCCTTCTTCTCTCAACTCGTCAAAGTCATTCTCCGTCCAGCTTTGTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp ATTATAGGACATCCAGCTGGTGTCCACTGGACAACCTaGTGTAAAAGTATTGAGTGGTATGTGACAACAGCA +
Preference number: 3 (lower is better)
Translates to: IIGHPAGVHWTT*CKSIEWYVTTA
Trigger: TGCTGTTGTCACATACCACTCAATACTTTTACACCAGGTTGTCCAGTGGACACCAGCTGGATGTCCTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp TGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTaGTGGTGGGACTGTAAACTAGTTCAACCATTGTGG +
Preference number: 3 (lower is better)
Translates to: WRGCGEIGTLLH*WWDCKLVQPLW
Trigger: CCACAATGGTTGAACTAGTTTACAGTCCCACCACCAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CAA 90 bp CTTGCCCGTCTATTTAAACAGTCACGACCTTCCTTAGAGAGGCAAGCAGTAATCGCAGATCTGCAAACCTaGTTAGTTCAATACAAACCA +
Preference number: 3 (lower is better)
Translates to: LARLFKQSRPSLERQAVIADLQT*LVQYKP
Trigger: TGGTTTGTATTGAACTAACAAGGTTTGCAGATCTGC...GATTACTGCTTGCCTCTCTAAGGAAGGTCGTGACTGTTTAAATAGACGGGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR TCA 72 bp AACACTAATCATGCTGAGGTTTTTGAAGCACAGCTATaGCTAGGGCAGGCACTGCTGATTCAGTCACAAAAA +
Preference number: 3 (lower is better)
Translates to: NTNHAEVFEAQL*LGQALLIQSQK
Trigger: TTTTTGTGACTGAATCAGCAGTGCCTGCCCTAGTCATAGCTGTGCTTCAAAAACCTCAGCATGATTAGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR GCA 72 bp AAGGTACAAATAAAAGGCGTTCTGTCGGAATTATCATaGACTGTGGTGGAAAGAACACTAAGGCAGGAAGTG +
Preference number: 3 (lower is better)
Translates to: KVQIKGVLSELS*TVVERTLRQEV
Trigger: CACTTCCTGCCTTAGTGTTCTTTCCACCACAGTGCATGATAATTCCGACAGAACGCCTTTTATTTGTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp GACTGTAAACTAGTTCAACCATTGTGGAAGACAGTGTaGCGATTCCTCAGGGATCTAGAACTAGAAATACCA +
Preference number: 3 (lower is better)
Translates to: DCKLVQPLWKTV*RFLRDLELEIP
Trigger: TGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCACAATGGTTGAACTAGTTTACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp GGATGTGGAGAAATAGGAACACTTTTACACTGGTGGTaGGACTGTAAACTAGTTCAACCATTGTGGAAGACA +
Preference number: 3 (lower is better)
Translates to: GCGEIGTLLHWW*DCKLVQPLWKT
Trigger: TGTCTTCCACAATGGTTGAACTAGTTTACAGTCCCACCACCAGTGTAAAAGTGTTCCTATTTCTCCACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp AGAGGATGTGGAGAAATAGGAACACTTTTACACTGGTaGTGGGACTGTAAACTAGTTCAACCATTGTGGAAG +
Preference number: 3 (lower is better)
Translates to: RGCGEIGTLLHW*WDCKLVQPLWK
Trigger: CTTCCACAATGGTTGAACTAGTTTACAGTCCCACCACCAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp CACCAACAACAGACAAACAGAGAGCCAAATCATGAGTaGACTCCCATTCACAACTGCCTCAAAGAGAATAAA +
Preference number: 3 (lower is better)
Translates to: HQQQTNREPNHE*TPIHNCLKENK
Trigger: TTTATTCTCTTTGAGGCAGTTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp TATACACCAACAACAGACAAACAGAGAGCCAAATCATaGGTGAACTCCCATTCACAACTGCCTCAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: YTPTTDKQRAKS*VNSHSQLPQRE
Trigger: TTCTCTTTGAGGCAGTTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR GCA 72 bp AAAATACTGAAGAGAAAGGTTCCTGGTGTCAGATGTTaGCTTACAGGAAGTACTTTCACAACTGGGGTATTC +
Preference number: 3 (lower is better)
Translates to: KILKRKVPGVRC*LTGSTFTTGVF
Trigger: GAATACCCCAGTTGTGAAAGTACTTCCTGTAAGGCAACATCTGACACCAGGAACCTTTCTCTTCAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR CCA 72 bp GATCTCTCAGCAGAAACTCTACAAGCCAGAAGAGAGTaGGGGTCAATATTCAACGTTCTTGAAGAAAAGAAT +
Preference number: 3 (lower is better)
Translates to: DLSAETLQARRE*GSIFNVLEEKN
Trigger: ATTCTTTTCTTCAAGAACGTTGAATATTGACCCCCACTCTCTTCTGGCTTGTAGAGTTTCTGCTGAGAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp AGCTGTAAGCACTACCAGCAAGTATACCCTACTGGTTaGAGAACTTTGTTTAAAGGATATAAGTTGTGTGCC +
Preference number: 3 (lower is better)
Translates to: SCKHYQQVYPTG*RTLFKGYKLCA
Trigger: GGCACACAACTTATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTTACAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CAA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATATCGTGGTTTACTTTTaGCAAGCCATGTATCTTTCA +
Preference number: 3 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNIVVYF*QAMYLS
Trigger: TGAAAGATACATGGCTTGCAAAAAGTAAACCACGAT...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546260.5
3UTR-3UTR CAA 90 bp GAACTTCCCCAATCTAGCAAGGGAGGACAACATTCAAATTCAGGAAATACAGAGGGCAATAATCTGTGGTaGGTTAATGTTCTAAGATGT +
Preference number: 3 (lower is better)
Translates to: ELPQSSKGGQHSNSGNTEGNNLW*VNVLRC
Trigger: ACATCTTAGAACATTAACCAACCACAGATTATTGCC...CTCTGTATTTCCTGAATTTGAATGTTGTCCTCCCTTGCTAGATTGGGGAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp TATACAGGAACATTTGACCTAACAAAAACCACTGGGTaGCATCTACCAGAAGTATCACTGCAGAGGATTACT +
Preference number: 3 (lower is better)
Translates to: YTGTFDLTKTTG*HLPEVSLQRIT
Trigger: AGTAATCCTCTGCAGTGATACTTCTGGTAGATGTCACCCAGTGGTTTTTGTTAGGTCAAATGTTCCTGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR TCA 72 bp AATGACTTTGACGAGTTGAGAGAAGAAGGCTTCAGATaGTCAAACTTCTCCAAGCTAAAAGAGGAAGTTCGA +
Preference number: 3 (lower is better)
Translates to: NDFDELREEGFR*SNFSKLKEEVR
Trigger: TCGAACTTCCTCTTTTAGCTTGGAGAAGTTTGATCATCTGAAGCCTTCTTCTCTCAACTCGTCAAAGTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp GGTGAGGTTTCTTGTAGGCAGCATACAGTCGAGTCATaGTGGTGGTTTTTAATCCATTCAGTCAATCTATAT +
Preference number: 3 (lower is better)
Translates to: GEVSCRQHTVES*WWFLIHSVNLY
Trigger: ATATAGATTGACTGAATGGATTAAAAACCACCATCATGACTCGACTGTATGCTGCCTACAAGAAACCTCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp ACCAACGAGAACAAAGACACAACATACCAGAATCTCTaGGACACATTTAAAGCAGTGTGTAGAGGGAAATTT +
Preference number: 3 (lower is better)
Translates to: TNENKDTTYQNL*DTFKAVCRGKF
Trigger: AAATTTCCCTCTACACACTGCTTTAAATGTGTCCCAGAGATTCTGGTATGTTGTGTCTTTGTTCTCGTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CCA 72 bp ATTTGTATGCAATATCTTTCTCCATACCTTCACTTTTaGCCTGTCTTTACAGGTGAGGTTTCTTGTAGGCAG +
Preference number: 3 (lower is better)
Translates to: ICMQYLSPYLHF*PVFTGEVSCRQ
Trigger: CTGCCTACAAGAAACCTCACCTGTAAAGACAGGCCAAAAGTGAAGGTATGGAGAAAGATATTGCATACAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR-3UTR CAA 90 bp TCTCTCCCCATTACATGTTTCCCAAATTTGTTATTTCCTAAATCACGGGGCCTTTATCGATTATCTTCCTaGTGCAAACCACTAACGAAT +
Preference number: 3 (lower is better)
Translates to: SLPITCFPNLLFPKSRGLYRLSS*CKPLTN
Trigger: ATTCGTTAGTGGTTTGCACAAGGAAGATAATCGATA...AAGGCCCCGTGATTTAGGAAATAACAAATTTGGGAAACATGTAATGGGGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR CCA 72 bp AAATATATATATTGTCTCAATCCTTGCTTGGTCTCTTaGCTCCTAAACCCCTTGAAGTATCTTTGGTTTGCC +
Preference number: 3 (lower is better)
Translates to: KYIYCLNPCLVS*LLNPLKYLWFA
Trigger: GGCAAACCAAAGATACTTCAAGGGGTTTAGGAGCCAAGAGACCAAGCAAGGATTGAGACAATATATATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp ATACAGCTCTATTTGCAAAAACTATACAGGAACATTTaGCCTAACAAAAACCACTGGGTGACATCTACCAGA +
Preference number: 3 (lower is better)
Translates to: IQLYLQKLYRNI*PNKNHWVTSTR
Trigger: TCTGGTAGATGTCACCCAGTGGTTTTTGTTAGGTCAAATGTTCCTGTATAGTTTTTGCAAATAGAGCTGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR CCA 72 bp GAGGACACAAACAAATGGAAGAACATTCCATGCTCATaGATAGGAAGAATCAATATCGTGAAAATGGCTATA +
Preference number: 3 (lower is better)
Translates to: EDTNKWKNIPCS*IGRINIVKMAI
Trigger: TATAGCCATTTTCACGATATTGATTCTTCCTATCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR TCA 72 bp GCAGATCTGCAAACCTTGTTAGTTCAATACAAACCATaGTCTAGCAGACAACTTATATTCAAAAGCTCATCT +
Preference number: 3 (lower is better)
Translates to: ADLQTLLVQYKP*SSRQLIFKSSS
Trigger: AGATGAGCTTTTGAATATAAGTTGTCTGCTAGATCATGGTTTGTATTGAACTAACAAGGTTTGCAGATCTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR GCA 72 bp AATTCAACAAGAAGAGCTAACTATCTTAAATATATATaGACCCAATACAGGAGCACCCAGATTCATAAACCA +
Preference number: 3 (lower is better)
Translates to: NSTRRANYLKYI*TQYRSTQIHKP
Trigger: TGGTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTTAAGATAGTTAGCTCTTCTTGTTGAATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp GTCCTAGGCTGGAGTCCCGACCCCGTTTGCTCTCAGGAAGATGACAAGGACCATGCCTCTGCCGGGGACTaGCTCCCGCCGCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VLGWSPDPVCSQEDDKDHASAGD*LPPLSL
Trigger: CAGGCTGAGCGGCGGGAGGCAGTCCCCGGCAGAGGC...ATGGTCCTTGTCATCTTCCTGAGAGCAAACGGGGTCGGGACTCCAGCCTAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR GCA 90 bp TGCAGGGAGTCTCCAAGTCCTAGGCTGGAGTCCCGACCCCGTTTGCTCTCAGGAAGGTCGGGGAGGCTGTaGTTCTGCCTGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: CRESPSPRLESRPRLLSGRSGRL*FCLEPR
Trigger: TCTGGGCTCCAGGCAGAAGCACAGCCTCCCCGACCT...TCCTGAGAGCAAACGGGGTCGGGACTCCAGCCTAGGACTTGGAGACTCCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR GCA 90 bp CAGGAGGTGACCCTGACACTCAGAGACACCTGCGGACCCGATGATGTCTGGCCACGCTCTCAGCCCTCCTaGAAACGGCTGGCACACCTA +
Preference number: 4 (lower is better)
Translates to: QEVTLTLRDTCGPDDVWPRSQPS*KRLAHL
Trigger: TAGGTGTGCCAGCCGTTTGCAGGAGGGCTGAGAGCG...TGGCCAGACATCATCGGGTCCGCAGGTGTCTCTGAGTGTCAGGGTCACCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR TCA 90 bp TGCAGGGAGTCTCCAAGTCCTAGGCTGGAGTCCCGACCCCGTTTGCTCTCAGGATCCTCCTCTCCCACCTaGAGTCAAGTGGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: CRESPSPRLESRPRLLSGSSSPT*SQVGSV
Trigger: CACTGAGCCCACTTGACTTCAGGTGGGAGAGGAGGA...TCCTGAGAGCAAACGGGGTCGGGACTCCAGCCTAGGACTTGGAGACTCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR GCA 90 bp CCGGGAAGGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCTGTGACAAAACCGGAGCCAGCTaGCTGCTGGTGCCGCACACT +
Preference number: 4 (lower is better)
Translates to: PGRQGVREFPFLAKGSCDKTGAS*LLVPHT
Trigger: AGTGTGCGGCACCAGCAGGCAGCTGGCTCCGGTTTT...GTCACAGCTTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGCCTTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCTGGGGCCTGGCTCCCTaGGGTCGCCTCTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFWGLAP*GRLCRG
Trigger: TCCCCGGCAGAGGCGACCCCAGGGAGCCAGGCCCCA...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546260.5
CDS-3UTR CCA 90 bp AACGGAATGTGGCTCACAACAGTAAGGCAAGCTCCTTCGCAGGACCCCAAGTTCAGAGGCCCGTCCGTATaGGGCCTGGCTCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: NGMWLTTVRQAPSQDPKFRGPSV*GLAPWG
Trigger: ACCCCAGGGAGCCAGGCCCCATACGGACGGGCCTCT...GAACTTGGGGTCCTGCGAAGGAGCTTGCCTTACTGTTGTGAGCCACATTCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR CAA 72 bp CCAACTGAGGTACCAGGTTCATCTCACTGGGGCTTGTaGGACAGTGGGTGTAGGACGGTGGGTGCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: PTEVPGSSHWGL*DSGCRTVGAAH
Trigger: GTGGGCTGCACCCACCGTCCTACACCCACTGTCCAACAAGCCCCAGTGAGATGAACCTGGTACCTCAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp GTAAGACACCACTCCCACTTCTATCAGGAGGTGACCCTGACACTCAGAGACACCCACCTGCGGACCCGATaGTGTCTGGCCACCAGTGGA +
Preference number: 4 (lower is better)
Translates to: VRHHSHFYQEVTLTLRDTHLRTR*CLATSG
Trigger: TCCACTGGTGGCCAGACATCATCGGGTCCGCAGGTG...GGTGTCTCTGAGTGTCAGGGTCACCTCCTGATAGAAGTGGGAGTGGTGTCTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR TCA 90 bp CAGGAGGTGACCCTGACACTCAGAGACACCTGCGGACCCGATGATGTCTGGCCAGTCAAGTGGGCTCAGTaGAGTTTCACCTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: QEVTLTLRDTCGPDDVWPVKWAQ*SFTCRV
Trigger: TACCCTGCAGGTGAAACTTCACTGAGCCCACTTGAC...TGGCCAGACATCATCGGGTCCGCAGGTGTCTCTGAGTGTCAGGGTCACCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp AGGTTCCTGGTGTCAGATGTTGCCTTACAGGAAGTACTTTCACAACTGGGGTATTGGGGCCTGGCTCCCTaGGGTCGCCTCTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: RFLVSDVALQEVLSQLGYWGLAP*GRLCRG
Trigger: TCCCCGGCAGAGGCGACCCCAGGGAGCCAGGCCCCA...ATACCCCAGTTGTGAAAGTACTTCCTGTAAGGCAACATCTGACACCAGGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452684.2
3UTR CAA 72 bp CTTCCAACTGAGGTACCAGGTTCATCTCACTGGGGCTaGTTGGACAGTGGGTGTAGGACGGTGGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPTEVPGSSHWG*LDSGCRTVGAA
Trigger: GGCTGCACCCACCGTCCTACACCCACTGTCCAACAAGCCCCAGTGAGATGAACCTGGTACCTCAGTTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp GTCCTAGGCTGGAGTCCCGACCCCGTTTGCTCTCAGGAAGATGACAAGGACCATACACTCAGAGACACCTaGGGACCCGATGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: VLGWSPDPVCSQEDDKDHTLRDT*GPDDVW
Trigger: CCAGACATCATCGGGTCCGCAGGTGTCTCTGAGTGT...ATGGTCCTTGTCATCTTCCTGAGAGCAAACGGGGTCGGGACTCCAGCCTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR TCA 90 bp GTCCTAGGCTGGAGTCCCGACCCCGTTTGCTCTCAGGAAGATGACAAGGACCATGGTACTTCTCCTCGGTaGCGTTCAGGTTGTTCACGT +
Preference number: 4 (lower is better)
Translates to: VLGWSPDPVCSQEDDKDHGTSPR*RSGCSR
Trigger: ACGTGAACAACCTGAACGTCACCGAGGAGAAGTACC...ATGGTCCTTGTCATCTTCCTGAGAGCAAACGGGGTCGGGACTCCAGCCTAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR GCA 90 bp TGCAGGGAGTCTCCAAGTCCTAGGCTGGAGTCCCGACCCCGTTTGCTCTCAGGAAAAGAGAGACTATCGTaGCTGGAAAACTCGGAACCG +
Preference number: 4 (lower is better)
Translates to: CRESPSPRLESRPRLLSGKERLS*LENSEP
Trigger: CGGTTCCGAGTTTTCCAGGCACGATAGTCTCTCTTT...TCCTGAGAGCAAACGGGGTCGGGACTCCAGCCTAGGACTTGGAGACTCCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp GTAAGACACCACTCCCACTTCTATCAGGAGGTGACCCTGACACTCAGAGACACCCCTCCTGCAAACGGCTaGCACACCTACCTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: VRHHSHFYQEVTLTLRDTPPANG*HTYLRD
Trigger: GTCTCTCAGGTAGGTGTGCCAGCCGTTTGCAGGAGG...GGTGTCTCTGAGTGTCAGGGTCACCTCCTGATAGAAGTGGGAGTGGTGTCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCGTGGGGGCAGTCTTGTaGGCTGAGCCCTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFVGAVL*AEPSTC
Trigger: ACAGGTGGAGGGCTCAGCCCACAAGACTGCCCCCAC...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp AACGGAATGTGGCTCACAACAGTAAGGCAAGCTCCTTCGCAGGACCCCAAGTTCGCTGGCACACCTACCTaGGAGACCAAACATTTCCCC +
Preference number: 4 (lower is better)
Translates to: NGMWLTTVRQAPSQDPKFAGTPT*ETKHFP
Trigger: GGGGAAATGTTTGGTCTCTCAGGTAGGTGTGCCAGC...GAACTTGGGGTCCTGCGAAGGAGCTTGCCTTACTGTTGTGAGCCACATTCCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR TCA 90 bp CTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCCATCAGGCAGAGGTTGCAGTGAGTTaGGACTGTGCCACCGCACTC +
Preference number: 4 (lower is better)
Translates to: LTTPIQHSVGSSGQGHQAEVAVS*DCATAL
Trigger: GAGTGCGGTGGCACAGTCTCAACTCACTGCAACCTC...TGCCTGATGGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp TATTTCCTAAATCACGGGGCCTTTTCCCGTAATTCAAGGTTCGTCTGTCTCAAGCGTCCGTATGGGGCCTaGCTCCCTGGGGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: YFLNHGAFSRNSRFVCLKRPYGA*LPGVAS
Trigger: AGAGGCGACCCCAGGGAGCCAGGCCCCATACGGACG...CTTGAGACAGACGAACCTTGAATTACGGGAAAAGGCCCCGTGATTTAGGAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp GTCCTAGGCTGGAGTCCCGACCCCGTTTGCTCTCAGGAAGATGACAAGGACCATAGAGACTATCGTGCCTaGAAAACTCGGAACCGGTAC +
Preference number: 4 (lower is better)
Translates to: VLGWSPDPVCSQEDDKDHRDYRA*KTRNRY
Trigger: GTACCGGTTCCGAGTTTTCCAGGCACGATAGTCTCT...ATGGTCCTTGTCATCTTCCTGAGAGCAAACGGGGTCGGGACTCCAGCCTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR TCA 90 bp GTCCTAGGCTGGAGTCCCGACCCCGTTTGCTCTCAGGAAGATGACAAGGACCATTTGCTCTCAGGAAGATaGCAAGGACCATGGTTCCTA +
Preference number: 4 (lower is better)
Translates to: VLGWSPDPVCSQEDDKDHLLSGR*QGPWFL
Trigger: TAGGAACCATGGTCCTTGTCATCTTCCTGAGAGCAA...ATGGTCCTTGTCATCTTCCTGAGAGCAAACGGGGTCGGGACTCCAGCCTAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCGATTGGTATCTGGAGTaGGGGCAGTCTTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LETSLTRAPELLFRNPDPDWYLE*GQSCGL
Trigger: CAGCCCACAAGACTGCCCCCACTCCAGATACCAATC...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCCTCACTGGGGCTTGTTaGACAGTGGGTGTAGGACGG +
Preference number: 4 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFLTGAC*TVGVGR
Trigger: CCGTCCTACACCCACTGTCCAACAAGCCCCAGTGAG...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 72 bp GAGAGCATGAAAGCTCCATACCCCTTCCCACATGCCTaGCCCTGTGCATCTCTTCCATCTGGCTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: ESMKAPYPFPHA*PCASLPSGCSS
Trigger: AGATGAACAGCCAGATGGAAGAGATGCACAGGGCAAGGCATGTGGGAAGGGGTATGGAGCTTTCATGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp CTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCCATCAGGCATGGCCACGCTGGTCTTaGACTCCTTCAAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LTTPIQHSVGSSGQGHQAWPRWS*TPSSVL
Trigger: CAGAACACTTGAAGGAGTTCAAGACCAGCGTGGCCA...TGCCTGATGGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCTGGGAGGCTGAGGCATaGGAATCGCTTGAACTCAGG +
Preference number: 4 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFWEAEA*ESLELR
Trigger: CCTGAGTTCAAGCGATTCTCATGCCTCAGCCTCCCA...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACGCCTCTGCCGGGGACTaGCTCCCGCCGCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYASAGD*LPPLSL
Trigger: CAGGCTGAGCGGCGGGAGGCAGTCCCCGGCAGAGGC...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546260.5
CDS-3UTR GCA 90 bp CAGGAGGTGACCCTGACACTCAGAGACACCTGCGGACCCGATGATGTCTGGCCACATTTTTCCACTAGATaGCTCCAGTCAACAAGATGT +
Preference number: 4 (lower is better)
Translates to: QEVTLTLRDTCGPDDVWPHFSTR*LQSTRC
Trigger: ACATCTTGTTGACTGGAGGCATCTAGTGGAAAAATG...TGGCCAGACATCATCGGGTCCGCAGGTGTCTCTGAGTGTCAGGGTCACCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR GCA 90 bp AGGCGCTCTCAGCCCTCCTGCAAACGGCTGGCACACCTACCTGAGAGACCAAACATCAGGCTGAAATACTaGATTTTTCCACTAGATGCC +
Preference number: 4 (lower is better)
Translates to: RRSQPSCKRLAHLPERPNIRLKY*IFPLDA
Trigger: GGCATCTAGTGGAAAAATGCAGTATTTCAGCCTGAT...GTTTGGTCTCTCAGGTAGGTGTGCCAGCCGTTTGCAGGAGGGCTGAGAGCGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR GCA 90 bp GTCCTAGGCTGGAGTCCCGACCCCGTTTGCTCTCAGGAAGATGACAAGGACCATCCTGGTGTCAGATGTTaGCTTACAGGAAGTACTTTC +
Preference number: 4 (lower is better)
Translates to: VLGWSPDPVCSQEDDKDHPGVRC*LTGSTF
Trigger: GAAAGTACTTCCTGTAAGGCAACATCTGACACCAGG...ATGGTCCTTGTCATCTTCCTGAGAGCAAACGGGGTCGGGACTCCAGCCTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp CTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCCATCAGGCAAGACCAAGGCAAGATTaGAGGGTTTGGACTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LTTPIQHSVGSSGQGHQARPRQD*RVWTPS
Trigger: GCTGGGAGTCCAAACCCTCCAATCTTGCCTTGGTCT...TGCCTGATGGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCGGTACCCCTCTGAGATaGAGCTTCCAGAGGAATGAT +
Preference number: 4 (lower is better)
Translates to: LETSLTRAPELLFRNPDPGTPLR*SFQRND
Trigger: ATCATTCCTCTGGAAGCTTCATCTCAGAGGGGTACC...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATCCACTGAGCATGAGCTaGAGCAGGGCAAGGCATGGC +
Preference number: 4 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNPLSMS*SRARHG
Trigger: GCCATGCCTTGCCCTGCTTCAGCTCATGCTCAGTGG...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACACCACAGCCACGAGTaGCGCTCCTGCGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: NIKKCYNRAAYCILQYSIHHSHE*RSCAAR
Trigger: GCGGGCGGCGCAGGAGCGGCACTCGTGGCTGTGGTG...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337404.8
CDS-3UTR GCA 90 bp AAAACGAGTGACACAGTAGAGCTTTCTTTTCAGGCCCTACAATTCACCAGTGCTCACACCACAACGGTGTaGCTCCTCCTCTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: KTSDTVELSFQALQFTSAHTTTV*LLLSHL
Trigger: CAGGTGGGAGAGGAGGAGGCACACCGTTGTGGTGTG...AGCACTGGTGAATTGTAGGGCCTGAAAAGAAAGCTCTACTGTGTCACTCGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp AGGTTCCTGGTGTCAGATGTTGCCTTACAGGAAGTACTTTCACAACTGGGGTATTTGGCCAACGCCTCCTaGTACTTCTCCTCGGTGACG +
Preference number: 4 (lower is better)
Translates to: RFLVSDVALQEVLSQLGYLANAS*YFSSVT
Trigger: CGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAA...ATACCCCAGTTGTGAAAGTACTTCCTGTAAGGCAACATCTGACACCAGGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp AGGTTCCTGGTGTCAGATGTTGCCTTACAGGAAGTACTTTCACAACTGGGGTATCCTGGAACCTACCCTTaGCCAACGCCTCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: RFLVSDVALQEVLSQLGYPGTYP*PTPPGT
Trigger: AGTACCAGGAGGCGTTGGCCAAGGGTAGGTTCCAGG...ATACCCCAGTTGTGAAAGTACTTCCTGTAAGGCAACATCTGACACCAGGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp TGTTATTTCCTAAATCACGGGGCCTTTTCCCGTAATTCAAGGTTCGTCTGTCTCCTCCAAGTCCTAGGCTaGAGTCCCGACCCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: CYFLNHGAFSRNSRFVCLLQVLG*SPDPVC
Trigger: GCAAACGGGGTCGGGACTCCAGCCTAGGACTTGGAG...GAGACAGACGAACCTTGAATTACGGGAAAAGGCCCCGTGATTTAGGAAATAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp AAAACGAGTGACACAGTAGAGCTTTCTTTTCAGGCCCTACAATTCACCAGTGCTCACCTGCAGGGTAGCTaGGGATGCAGGGAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KTSDTVELSFQALQFTSAHLQGS*GCRESP
Trigger: TGGAGACTCCCTGCATCCCCAGCTACCCTGCAGGTG...AGCACTGGTGAATTGTAGGGCCTGAAAAGAAAGCTCTACTGTGTCACTCGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp CCGGGAAGGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCTGTGACTGCATCTCTTCCATCTaGCTGTTCATCTGTATTCTT +
Preference number: 4 (lower is better)
Translates to: PGRQGVREFPFLAKGSCDCISSI*LFICIL
Trigger: AAGAATACAGATGAACAGCCAGATGGAAGAGATGCA...GTCACAGCTTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGCCTTCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 72 bp GAACCCCACTTTATAGCCAGTCAGAAGTATAGGGACTaGCGATTGGTATCTGGAGTGGGGGCAGTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: EPHFIASQKYRD*RLVSGVGAVLW
Trigger: CCACAAGACTGCCCCCACTCCAGATACCAATCGCAAGTCCCTATACTTCTGACTGGCTATAAAGTGGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 72 bp GCTTTGAAGAGACCAGTGGTTCTCCCAGCACAGAGTTaGAGATCTGAGAACGGAGAGACTGCCTCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: ALKRPVVLPAQS*RSENGETASSS
Trigger: ACTTGAGGAGGCAGTCTCTCCGTTCTCAGATCTCAAACTCTGTGCTGGGAGAACCACTGGTCTCTTCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 72 bp AGGCCAAAGCAGGAGGACTGCTTTGAGACCCAGAGTTaGAGACTAGCCAGGCAACATAGCATAACCCCATCT +
Preference number: 4 (lower is better)
Translates to: RPKQEDCFETQS*RLARQHSITPS
Trigger: AGATGGGGTTATGCTATGTTGCCTGGCTAGTCTCAAACTCTGGGTCTCAAAGCAGTCCTCCTGCTTTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp CTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCCATCAGGCAGAGCCAAATCATGAGTaGACTCCCATTCACAACTGC +
Preference number: 4 (lower is better)
Translates to: LTTPIQHSVGSSGQGHQAEPNHE*TPIHNC
Trigger: GCAGTTGTGAATGGGAGTTCACTCATGATTTGGCTC...TGCCTGATGGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp GAACTTCCCCAATCTAGCAAGGGAGGACAACATTCAAATTCAGGAAATACAGAGGACTGCCTCCTCAAGTaGGTCCCTGACCCCCGAGTA +
Preference number: 4 (lower is better)
Translates to: ELPQSSKGGQHSNSGNTEDCLLK*VPDPRV
Trigger: TACTCGGGGGTCAGGGACTCACTTGAGGAGGCAGTC...CTCTGTATTTCCTGAATTTGAATGTTGTCCTCCCTTGCTAGATTGGGGAAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp TGTTATTTCCTAAATCACGGGGCCTTTTCCCGTAATTCAAGGTTCGTCTGTCTCTGGTGCTTGCTGTGGTaGAGCTGCATGATCTGCGCG +
Preference number: 4 (lower is better)
Translates to: CYFLNHGAFSRNSRFVCLWCLLW*SCMICA
Trigger: CGCGCAGATCATGCAGCTGCACCACAGCAAGCACCA...GAGACAGACGAACCTTGAATTACGGGAAAAGGCCCCGTGATTTAGGAAATAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR GCA 90 bp AAGCACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTTGTTTAAAGGATATCTCCGGTCGCGCCACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: KHYQQVYPTGWRTLFKGYLRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGCGCGACCGGAG...ATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp TGGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACTTGGCCAACGCCTCCTaGTACTTCTCCTCGGTGACG +
Preference number: 4 (lower is better)
Translates to: WKTVWRFLRDLELEIPFDLANAS*YFSSVT
Trigger: CGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAA...GTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp ACTTCAAACACAATCAGGCTGAAATACTGCATTTTTCCACTAGATGCCTCCAGTTCCCGCCGCTCAGCCTaGAACCTACCCTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: TSNTIRLKYCIFPLDASSSRRSA*NLPLAN
Trigger: GTTGGCCAAGGGTAGGTTCCAGGCTGAGCGGCGGGA...ACTGGAGGCATCTAGTGGAAAAATGCAGTATTTCAGCCTGATTGTGTTTGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCAGAGGCCCGTCCGTATaGGGCCTGGCTCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CSTLYHYKNSHKELNILSRGPSV*GLAPWG
Trigger: ACCCCAGGGAGCCAGGCCCCATACGGACGGGCCTCT...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546260.5
CDS-3UTR CCA 90 bp ATTTGTTATTTCCTAAATCACGGGGCCTTTTCCCGTAATTCAAGGTTCGTCTGTGGACCCGATGATGTCTaGCCACCAGTGGACAGGCGC +
Preference number: 4 (lower is better)
Translates to: ICYFLNHGAFSRNSRFVCGPDDV*PPVDRR
Trigger: GCGCCTGTCCACTGGTGGCCAGACATCATCGGGTCC...ACAGACGAACCTTGAATTACGGGAAAAGGCCCCGTGATTTAGGAAATAACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR TCA 90 bp TGGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACAAGCCAACCCCAACCTaGGCCTTGGACACCAACAGA +
Preference number: 4 (lower is better)
Translates to: WKTVWRFLRDLELEIPFDKPTPT*ALDTNR
Trigger: TCTGTTGGTGTCCAAGGCTCAGGTTGGGGTTGGCTT...GTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCCCTTGCAGTGGATCCTaGTTTGGACAAGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFPCSGS*FGQAAI
Trigger: AATTGCTGCTTGTCCAAATCAGGATCCACTGCAAGG...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCTATGACCACCACCATTaGACTTCAGTGCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFYDHHH*TSVQAE
Trigger: TTCAGCCTGCACTGAAGTTCAATGGTGGTGGTCATA...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCGGACACACTGAAAGATaGCTAGCATGTCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: LETSLTRAPELLFRNPDPGHTER*LACHRN
Trigger: GTTCCTATGACATGCTAGTCATCTTTCAGTGTGTCC...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCCTGAAAACCATGGCATaGGAACTACGTGACGAATGC +
Preference number: 4 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFLKTMA*ELRDEC
Trigger: GCATTCGTCACGTAGTTCTCATGCCATGGTTTTCAG...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp ACTTCAAACACAATCAGGCTGAAATACTGCATTTTTCCACTAGATGCCTCCAGTAAAACCGGAGCCAGCTaGCTGCTGGTGCCGCACACT +
Preference number: 4 (lower is better)
Translates to: TSNTIRLKYCIFPLDASSKTGAS*LLVPHT
Trigger: AGTGTGCGGCACCAGCAGGCAGCTGGCTCCGGTTTT...ACTGGAGGCATCTAGTGGAAAAATGCAGTATTTCAGCCTGATTGTGTTTGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR GCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACAGGTCGGGGAGGCTGTaGTTCTGCCTGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHRSGRL*FCLEPR
Trigger: TCTGGGCTCCAGGCAGAAGCACAGCCTCCCCGACCT...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp AAGCACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTTGTTTAAAGGATATAGGTCGGGGAGGCTGTaGTTCTGCCTGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: KHYQQVYPTGWRTLFKGYRSGRL*FCLEPR
Trigger: TCTGGGCTCCAGGCAGAAGCACAGCCTCCCCGACCT...ATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp AGGTTCCTGGTGTCAGATGTTGCCTTACAGGAAGTACTTTCACAACTGGGGTATTTGCTGTGGTGCAGCTaGATGATCTGCGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: RFLVSDVALQEVLSQLGYLLWCS*MICALM
Trigger: CATCAACGCGCAGATCATGCAGCTGCACCACAGCAA...ATACCCCAGTTGTGAAAGTACTTCCTGTAAGGCAACATCTGACACCAGGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR GCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTACTCCGGTCGCGCCACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLLRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTGGCGCGACCGGAG...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCACCCCAACCTGAGCCTTaGACACCAACAGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: LELEIPFDPAIPLLGIYPPQPEP*TPTDAA
Trigger: GGCTGCATCTGTTGGTGTCCAAGGCTCAGGTTGGGG...TGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACGTCCGTATGGGGCCTaGCTCCCTGGGGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: NIKKCYNRAAYCILQYSIRPYGA*LPGVAS
Trigger: AGAGGCGACCCCAGGGAGCCAGGCCCCATACGGACG...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546260.5
CDS-3UTR CCA 90 bp GAGAAGGAAACCAGCAAGCTGATAAGCAAGAAGGTCATAACAGTTTCAAACAATGCAGGGACCCCTCTTTaGGGTGTGCCAGGGGGATTC +
Preference number: 4 (lower is better)
Translates to: EKETSKLISKKVITVSNNAGTPL*GVPGGF
Trigger: GAATCCCCCTGGCACACCCCAAAGAGGGGTCCCTGC...ATTGTTTGAAACTGTTATGACCTTCTTGCTTATCAGCTTGCTGGTTTCCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp CCGGGAAGGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCTGTGACACAGCAAAAACACTTTaGTTTTGTCGTATATCCCTA +
Preference number: 4 (lower is better)
Translates to: PGRQGVREFPFLAKGSCDTAKTL*FCRISL
Trigger: TAGGGATATACGACAAAACCAAAGTGTTTTTGCTGT...GTCACAGCTTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGCCTTCCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCGTCCACTGGACAACCTaGTGTAAAAGTATTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LETSLTRAPELLFRNPDPVHWTT*CKSIEW
Trigger: CCACTCAATACTTTTACACCAGGTTGTCCAGTGGAC...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCCAAGCCAGAAGAGAGTaGGGGTCAATATTCAACGTT +
Preference number: 4 (lower is better)
Translates to: LETSLTRAPELLFRNPDPQARRE*GSIFNV
Trigger: AACGTTGAATATTGACCCCCACTCTCTTCTGGCTTG...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 72 bp AATCTCTGCAGACTTCAATGTCCCTGTCTGACAGCTTaGAAGAGACCAGTGGTTCTCCCAGCACAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: NLCRLQCPCLTA*KRPVVLPAQSL
Trigger: CAAACTCTGTGCTGGGAGAACCACTGGTCTCTTCAAAGCTGTCAGACAGGGACATTGAAGTCTGCAGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATGGTACTTCTCCTCGGTaGCGTTCAGGTTGTTCACGT +
Preference number: 4 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNGTSPR*RSGCSR
Trigger: ACGTGAACAACCTGAACGTCACCGAGGAGAAGTACC...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAGGTGGGTGGATGACTTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LELEIPFDPAIPLLGIYPGGWMT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAGTCATCCACCCACC...TGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAACTCCTGGGCCTGTaGTCCTCCTGCCTTAGCTTC +
Preference number: 4 (lower is better)
Translates to: LELEIPFDPAIPLLGIYPKLLGL*SSCLSF
Trigger: GAAGCTAAGGCAGGAGGATCACAGGCCCAGGAGTTT...TGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCCATGTCATAGGAACTTaGAAGCATTCGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFHVIGT*KHSCSF
Trigger: GAAGGAGCACGAATGCTTTCAAGTTCCTATGACATG...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp GAGAAGGAAACCAGCAAGCTGATAAGCAAGAAGGTCATAACAGTTTCAAACAATGGCCGGGTACCCCTCTaGGATGAAGCTTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: EKETSKLISKKVITVSNNGRVPL*DEASRG
Trigger: TCCTCTGGAAGCTTCATCTCAGAGGGGTACCCGGCC...ATTGTTTGAAACTGTTATGACCTTCTTGCTTATCAGCTTGCTGGTTTCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACAAAACCGGAGCCAGCTaGCTGCTGGTGCCGCACACT +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHKTGAS*LLVPHT
Trigger: AGTGTGCGGCACCAGCAGGCAGCTGGCTCCGGTTTT...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCAGGTCGGGGAGGCTGTaGTTCTGCCTGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: CSTLYHYKNSHKELNILSRSGRL*FCLEPR
Trigger: TCTGGGCTCCAGGCAGAAGCACAGCCTCCCCGACCT...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATAGGTCGGGGAGGCTGTaGTTCTGCCTGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDRSGRL*FCLEPR
Trigger: TCTGGGCTCCAGGCAGAAGCACAGCCTCCCCGACCT...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp TCTCTCCCCATTACATGTTTCCCAAATTTGTTATTTCCTAAATCACGGGGCCTTCAGGGTAGCTGGGGATaGAGGGAGTCTCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SLPITCFPNLLFPKSRGLQGSWG*RESPSP
Trigger: AGGACTTGGAGACTCCCTGCATCCCCAGCTACCCTG...AAGGCCCCGTGATTTAGGAAATAACAAATTTGGGAAACATGTAATGGGGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR GCA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATGGAGGCCTGCCTGCCTaGCTCTGTAGACTCCACCTC +
Preference number: 4 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDGGLPA*LCRLHL
Trigger: GAGGTGGAGTCTACAGAGGCAGGCAGGCAGGCCTCC...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp TGTAGAGGGAAATTTACAGCACTAAGTGCCCACAAGAGAAAGCAGGAAAGATCTCTCAAGAGATCCTCCTaGGTTGGCCTCCCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: CRGKFTALSAHKRKQERSLKRSS*VGLPKH
Trigger: GTGCTTTGGGAGGCCAACGCAGGAGGATCTCTTGAG...AGATCTTTCCTGCTTTCTCTTGTGGGCACTTAGTGCTGTAAATTTCCCTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCCTGTCGGAATTATCATaGACTGTGGTGGAAAGAACA +
Preference number: 4 (lower is better)
Translates to: LETSLTRAPELLFRNPDPLSELS*TVVERT
Trigger: TGTTCTTTCCACCACAGTGCATGATAATTCCGACAG...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATGCAGGGACCCCTCTTTaGGGTGTGCCAGGGGGATTC +
Preference number: 4 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDAGTPL*GVPGGF
Trigger: GAATCCCCCTGGCACACCCCAAAGAGGGGTCCCTGC...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCACAAGATTGGAGGGTTTaGACTCCCAGCCTCAACCCC +
Preference number: 4 (lower is better)
Translates to: LELEIPFDPAIPLLGIYPQDWRV*TPSLNP
Trigger: GGGGTTGAGGCTGGGAGTCCAAACCCTCCAATCTTG...TGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp CTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCCATCAGGCAAAGTCCAGGACAAGATaGATTCACAGCCGAATTCTA +
Preference number: 4 (lower is better)
Translates to: LTTPIQHSVGSSGQGHQAKSRTR*IHSRIL
Trigger: TAGAATTCGGCTGTGAATCCATCTTGTCCTGGACTT...TGCCTGATGGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACAAGCAGGGCAAGGCATaGCCTCACCCGGGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHKQGKA*PHPGRQ
Trigger: TTGCCTTCCCGGGTGAGGCCATGCCTTGCCCTGCTT...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATAACCAAAGTCACGTTTaGTGGCTTCCAGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNNQSHV*WLPATP
Trigger: GGGAGTTGCTGGAAGCCATCAAACGTGACTTTGGTT...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATCCAGGGACTAAACTCTaGCCTCCATTCTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNPGTKL*PPFFAL
Trigger: GAGAGCAAAGAATGGAGGTCAGAGTTTAGTCCCTGG...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp TGTAGAGGGAAATTTACAGCACTAAGTGCCCACAAGAGAAAGCAGGAAAGATCTGGTTTGCCAATGAAATaGTTGGTGGCTGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: CRGKFTALSAHKRKQERSGLPMK*LVAGSL
Trigger: GAGGCTCCCAGCCACCAATCATTTCATTGGCAAACC...AGATCTTTCCTGCTTTCTCTTGTGGGCACTTAGTGCTGTAAATTTCCCTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCAGGCATCACGCTACCTaGTTTCAAACTATACTACAA +
Preference number: 4 (lower is better)
Translates to: LETSLTRAPELLFRNPDPRHHAT*FQTILQ
Trigger: TTGTAGTATAGTTTGAAATCAGGTAGCGTGATGCCT...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TGTAGAGGGAAATTTACAGCACTAAGTGCCCACAAGAGAAAGCAGGAAAGATCTAAGCCAGCATCATCCTaGTACCAAAGCCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: CRGKFTALSAHKRKQERSKPASS*YQSLAE
Trigger: CTCTGCCAGGCTTTGGTATCAGGATGATGCTGGCTT...AGATCTTTCCTGCTTTCTCTTGTGGGCACTTAGTGCTGTAAATTTCCCTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATAAAACCGGAGCCAGCTaGCTGCTGGTGCCGCACACT +
Preference number: 4 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDKTGAS*LLVPHT
Trigger: AGTGTGCGGCACCAGCAGGCAGCTGGCTCCGGTTTT...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCAGCTCAAGGAGGCCTaGCTGCCTGCCTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYQLKEA*LPASVD
Trigger: GTCTACAGAGGCAGGCAGGCAGGCCTCCTTGAGCTG...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp TCTCTCCCCATTACATGTTTCCCAAATTTGTTATTTCCTAAATCACGGGGCCTTGGCTGTGCTTCTGCCTaGAGCCCAGATACCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SLPITCFPNLLFPKSRGLGCASA*SPDTPK
Trigger: TTTTGGGGTATCTGGGCTCCAGGCAGAAGCACAGCC...AAGGCCCCGTGATTTAGGAAATAACAAATTTGGGAAACATGTAATGGGGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCCAGCAACTCCCCCTTaGCCAACGCCTCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYPATPP*PTPPGT
Trigger: AGTACCAGGAGGCGTTGGCCAAGGGGGAGTTGCTGG...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337404.8
CDS-3UTR CCA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATATCCCGCCGCTCAGCCTaGAACCTACCCTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: NIKKCYNRAAYCILQYSISRRSA*NLPLAN
Trigger: GTTGGCCAAGGGTAGGTTCCAGGCTGAGCGGCGGGA...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546260.5
CDS-3UTR CCA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCGTGGGTGTAGGACGGTaGGTGCAGCCCACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: CSTLYHYKNSHKELNILSVGVGR*VQPTEH
Trigger: ATGCTCAGTGGGCTGCACCCACCGTCCTACACCCAC...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp GAACTTCCCCAATCTAGCAAGGGAGGACAACATTCAAATTCAGGAAATACAGAGGGTTGGGTTCCAAGATaGCCGAATAGGAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: ELPQSSKGGQHSNSGNTEGWVPR*PNRNSS
Trigger: GGAGCTGTTCCTATTCGGCCATCTTGGAACCCAACC...CTCTGTATTTCCTGAATTTGAATGTTGTCCTCCCTTGCTAGATTGGGGAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 72 bp TTACACTGGTGGTGGGACTGTAAACTAGTTCAACCATaGTGGAAGACAGTGTGGCGATTCCTCAGGGATCTA +
Preference number: 4 (lower is better)
Translates to: LHWWWDCKLVQP*WKTVWRFLRDL
Trigger: TAGATCCCTGAGGAATCGCCACACTGTCTTCCACAATGGTTGAACTAGTTTACAGTCCCACCACCAGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 72 bp GATGAAGCTTCCAGAGGAATGATCAGGCAGCAACATTaGCTGTTCAGCAATATTCGCTGTTCTACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: DEASRGMIRQQH*LFSNIRCSTAS
Trigger: GGAGGCTGTAGAACAGCGAATATTGCTGAACAGCAAATGTTGCTGCCTGATCATTCCTCTGGAAGCTTCATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACAAGCCAACCCCAACCTaGGCCTTGGACACCAACAGA +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHKPTPT*ALDTNR
Trigger: TCTGTTGGTGTCCAAGGCTCAGGTTGGGGTTGGCTT...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp CCCCTAAGGGAAATCAAGAAAAGTATCAAGTCTAAAGATCCTGAACTGTTCCACGGACCCCAAGTTCCCTaGGATGACAGAAGTGTGTTC +
Preference number: 4 (lower is better)
Translates to: PLREIKKSIKSKDPELFHGPQVP*DDRSVF
Trigger: GAACACACTTCTGTCATCTCAGGGAACTTGGGGTCC...GTGGAACAGTTCAGGATCTTTAGACTTGATACTTTTCTTGATTTCCCTTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR TCA 90 bp AAAACGAGTGACACAGTAGAGCTTTCTTTTCAGGCCCTACAATTCACCAGTGCTGGGCTATTTTCCTTGTaGACTTTGACCCCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: KTSDTVELSFQALQFTSAGLFSL*TLTPKG
Trigger: TCCCTTAGGGGTCAAAGTTCACAAGGAAAATAGCCC...AGCACTGGTGAATTGTAGGGCCTGAAAAGAAAGCTCTACTGTGTCACTCGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR TCA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCAGGTGGAGGTTGCAGTaGGTTGAGACTGTGCCACCG +
Preference number: 4 (lower is better)
Translates to: CSTLYHYKNSHKELNILSRWRLQ*VETVPP
Trigger: CGGTGGCACAGTCTCAACTCACTGCAACCTCCACCT...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATAAGCTTCCAGAGGAATaGTCAGGCAGCAACATTTGC +
Preference number: 4 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNKLPEE*SGSNIC
Trigger: GCAAATGTTGCTGCCTGATCATTCCTCTGGAAGCTT...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACTGGTGCTTGCTGTGGTaGAGCTGCATGATCTGCGCG +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYWCLLW*SCMICA
Trigger: CGCGCAGATCATGCAGCTGCACCACAGCAAGCACCA...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATTGGTGCTTGCTGTGGTaGAGCTGCATGATCTGCGCG +
Preference number: 4 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDWCLLW*SCMICA
Trigger: CGCGCAGATCATGCAGCTGCACCACAGCAAGCACCA...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp CCCCTAAGGGAAATCAAGAAAAGTATCAAGTCTAAAGATCCTGAACTGTTCCACAGTCCCGACCCCGTTTaGTCTCAGGAAGATGACAAG +
Preference number: 4 (lower is better)
Translates to: PLREIKKSIKSKDPELFHSPDPV*SQEDDK
Trigger: CTTGTCATCTTCCTGAGAGCAAACGGGGTCGGGACT...GTGGAACAGTTCAGGATCTTTAGACTTGATACTTTTCTTGATTTCCCTTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR GCA 90 bp CTTGCCCGTCTATTTAAACAGTCACGACCTTCCTTAGAGAGGCAAGCAGTAATCCTGACCTCCATTCTTTaGTCTCAGTTTCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LARLFKQSRPSLERQAVILTSIL*SQFLPE
Trigger: CTCAGGAAGAAACTGAGAGCAAAGAATGGAGGTCAG...GATTACTGCTTGCCTCTCTAAGGAAGGTCGTGACTGTTTAAATAGACGGGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCTTTGCTTCCTTGTTTTaGTCCAACACTAATCATGCT +
Preference number: 4 (lower is better)
Translates to: LETSLTRAPELLFRNPDPFASLF*SNTNHA
Trigger: AGCATGATTAGTGTTGGAGCAAAACAAGGAAGCAAA...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCCTAGAAGAAAACCTATaGAGTACCATTCAGGACACA +
Preference number: 4 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFLEENL*STIQDT
Trigger: TGTGTCCTGAATGGTACTGCATAGGTTTTCTTCTAG...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCACCAGTATCAGCCACTaGAAAAACATGCCAAATTGT +
Preference number: 4 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFTSISH*KNMPNC
Trigger: ACAATTTGGCATGTTTTTGCAGTGGCTGATACTGGT...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTAGCGTGGTGCTTGCTGTaGTGCAGCTGCATGATCTGC +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLAWCLL*CSCMIC
Trigger: GCAGATCATGCAGCTGCACCACAGCAAGCACCACGC...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACGCGTGGTGCTTGCTGTaGTGCAGCTGCATGATCTGC +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYAWCLL*CSCMIC
Trigger: GCAGATCATGCAGCTGCACCACAGCAAGCACCACGC...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTATTGGCCAACGCCTCCTaGTACTTCTCCTCGGTGACG +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLLANAS*YFSSVT
Trigger: CGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAA...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATTGGCCAACGCCTCCTaGTACTTCTCCTCGGTGACG +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSALANAS*YFSSVT
Trigger: CGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAA...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCACCCCAACCTGAGCCTTaGACACCAACAGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSAPQPEP*TPTDAA
Trigger: GGCTGCATCTGTTGGTGTCCAAGGCTCAGGTTGGGG...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp CTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCCATCAGGCAGCCGAGTGTTTCCCTTaGGAAAGTGTTAATATTTTA +
Preference number: 4 (lower is better)
Translates to: LTTPIQHSVGSSGQGHQAAECFP*ESVNIL
Trigger: TAAAATATTAACACTTTCCCAAGGGAAACACTCGGC...TGCCTGATGGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp TGTAGAGGGAAATTTACAGCACTAAGTGCCCACAAGAGAAAGCAGGAAAGATCTCCAGCTGGTGTCCACTaGACAACCTGGTGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: CRGKFTALSAHKRKQERSPAGVH*TTWCKS
Trigger: ACTTTTACACCAGGTTGTCCAGTGGACACCAGCTGG...AGATCTTTCCTGCTTTCTCTTGTGGGCACTTAGTGCTGTAAATTTCCCTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp TGTAGAGGGAAATTTACAGCACTAAGTGCCCACAAGAGAAAGCAGGAAAGATCTCCTTGCTTGGTCTCTTaGCTCCTAAACCCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: CRGKFTALSAHKRKQERSPCLVS*LLNPLK
Trigger: CTTCAAGGGGTTTAGGAGCCAAGAGACCAAGCAAGG...AGATCTTTCCTGCTTTCTCTTGTGGGCACTTAGTGCTGTAAATTTCCCTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp AAGCACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTTGTTTAAAGGATATGAAGCTCGAACTAGGTaGAGCCCACTGCAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: KHYQQVYPTGWRTLFKGYEARTR*SPLQLK
Trigger: CTTGAGCTGCAGTGGGCTCCACCTAGTTCGAGCTTC...ATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp GAGAAGGAAACCAGCAAGCTGATAAGCAAGAAGGTCATAACAGTTTCAAACAATCCAGGTTCATCTCACTaGGGCTTGTTGGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: EKETSKLISKKVITVSNNPGSSH*GLLDSG
Trigger: CCCACTGTCCAACAAGCCCCAGTGAGATGAACCTGG...ATTGTTTGAAACTGTTATGACCTTCTTGCTTATCAGCTTGCTGGTTTCCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACGGTACTTCTCCTCGGTaGCGTTCAGGTTGTTCACGT +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHGTSPR*RSGCSR
Trigger: ACGTGAACAACCTGAACGTCACCGAGGAGAAGTACC...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCAAAGCCAACCCCAACCTaGGCCTTGGACACCAACAGA +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSAKPTPT*ALDTNR
Trigger: TCTGTTGGTGTCCAAGGCTCAGGTTGGGGTTGGCTT...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACGTCCCCGTTCCTTATTaGAACCAAGCCAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHVPVPY*NQANPN
Trigger: GTTGGGGTTGGCTTGGTTTCAATAAGGAACGGGGAC...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp GAGAAGGAAACCAGCAAGCTGATAAGCAAGAAGGTCATAACAGTTTCAAACAATTGGCCACGCTGGTCTTaGACTCCTTCAAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: EKETSKLISKKVITVSNNWPRWS*TPSSVL
Trigger: CAGAACACTTGAAGGAGTTCAAGACCAGCGTGGCCA...ATTGTTTGAAACTGTTATGACCTTCTTGCTTATCAGCTTGCTGGTTTCCTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTAGACGTGGAGAGAGCATaGAAGCTCCATACCCCTTCC +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLDVERA*KLHTPS
Trigger: GGAAGGGGTATGGAGCTTTCATGCTCTCTCCACGTC...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TGGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCATCAGACTAACAGCTaGTCTCTCAGCAGAAACTCT +
Preference number: 4 (lower is better)
Translates to: WKTVWRFLRDLELEIPFDHQTNS*SLSRNS
Trigger: AGAGTTTCTGCTGAGAGATCAGCTGTTAGTCTGATG...GTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCCACTCTGAGCCCCAGTaGAGAATGGTGGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: CSTLYHYKNSHKELNILSHSEPQ*RMVAAV
Trigger: TACAGCTGCCACCATTCTTCACTGGGGCTCAGAGTG...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp CTGCAGAGGATTACTCGACAAAAAGTGCAATTTTCTATAGAAAGCCGAGTGTTTTTGCTGTGGTGCAGCTaGATGATCTGCGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: LQRITRQKVQFSIESRVFLLWCS*MICALM
Trigger: CATCAACGCGCAGATCATGCAGCTGCACCACAGCAA...AAACACTCGGCTTTCTATAGAAAATTGCACTTTTTGTCGAGTAATCCTCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATATGGTGCTTGCTGTGGTaGAGCTGCATGATCTGCGCG +
Preference number: 4 (lower is better)
Translates to: NIKKCYNRAAYCILQYSIWCLLW*SCMICA
Trigger: CGCGCAGATCATGCAGCTGCACCACAGCAAGCACCA...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCTTTGCTTCCTTGTTTTaGTCCAACACTAATCATGCT +
Preference number: 4 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFFASLF*SNTNHA
Trigger: AGCATGATTAGTGTTGGAGCAAAACAAGGAAGCAAA...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATCCAATATCCCACAGGTaGTCTGGTAAAATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNPISHR*SGKISK
Trigger: CTTGGAGATTTTACCAGAGCACCTGTGGGATATTGG...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATGGCTGTGCTTCTGCCTaGAGCCCAGATACCCCAAAA +
Preference number: 4 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDGCASA*SPDTPK
Trigger: TTTTGGGGTATCTGGGCTCCAGGCAGAAGCACAGCC...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCGGCTGTGCTTCTGCCTaGAGCCCAGATACCCCAAAA +
Preference number: 4 (lower is better)
Translates to: CSTLYHYKNSHKELNILSGCASA*SPDTPK
Trigger: TTTTGGGGTATCTGGGCTCCAGGCAGAAGCACAGCC...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp ACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATAACGTTGGCCAACGCCTCCTaGTACTTCTCCTCGGTGACG +
Preference number: 4 (lower is better)
Translates to: TLYHYKNSHKELNILSITLANAS*YFSSVT
Trigger: CGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAA...CGTTATGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCCCAACCTGAGCCTTaGACACCAACAGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: NIKKCYNRAAYCILQYSIPQPEP*TPTDAA
Trigger: GGCTGCATCTGTTGGTGTCCAAGGCTCAGGTTGGGG...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCTGGAACCTACCCTTaGCCAACGCCTCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: NIKKCYNRAAYCILQYSIPGTYP*PTPPGT
Trigger: AGTACCAGGAGGCGTTGGCCAAGGGTAGGTTCCAGG...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546260.5
CDS-3UTR CCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACGGGCATCGAGACTACTaGGTGCAACAATGGGACACA +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHGHRDY*VQQWDT
Trigger: TGTGTCCCATTGTTGCACCCAGTAGTCTCGATGCCC...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATTGTCCTGGGACTTCATaGAGCACAAATTATAGTGGG +
Preference number: 4 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNCPGTS*STNYSG
Trigger: CCCACTATAATTTGTGCTCCATGAAGTCCCAGGACA...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 72 bp CCTTTCTCCTACTGCAAAAACCACCTTTTTGCAGTTTaGCTGTTGAAGTTTGCCTTTACTGTGCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PFSYCKNHLFAV*LLKFAFTVQVS
Trigger: GCTCACCTGCACAGTAAAGGCAAACTTCAACAGCAAAACTGCAAAAAGGTGGTTTTTGCAGTAGGAGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATGGTACTTCTCCTCGGTaGCGTTCAGGTTGTTCACGT +
Preference number: 4 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDGTSPR*RSGCSR
Trigger: ACGTGAACAACCTGAACGTCACCGAGGAGAAGTACC...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACGGTACTTCTCCTCGGTaGCGTTCAGGTTGTTCACGT +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYGTSPR*RSGCSR
Trigger: ACGTGAACAACCTGAACGTCACCGAGGAGAAGTACC...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCAGTCCCCGTTCCTTATTaGAACCAAGCCAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSAVPVPY*NQANPN
Trigger: GTTGGGGTTGGCTTGGTTTCAATAAGGAACGGGGAC...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp AGGTTCCTGGTGTCAGATGTTGCCTTACAGGAAGTACTTTCACAACTGGGGTATCAAACACAATCAGGCTaGAATACTGCATTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: RFLVSDVALQEVLSQLGYQTQSG*NTAFFH
Trigger: GTGGAAAAATGCAGTATTTCAGCCTGATTGTGTTTG...ATACCCCAGTTGTGAAAGTACTTCCTGTAAGGCAACATCTGACACCAGGAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR TCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACCCAGGGACTAAACTCTaGCCTCCATTCTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHPGTKL*PPFFAL
Trigger: GAGAGCAAAGAATGGAGGTCAGAGTTTAGTCCCTGG...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp CTGCAGAGGATTACTCGACAAAAAGTGCAATTTTCTATAGAAAGCCGAGTGTTTCTTAACACGTGCCCCTaGGCTACTTTTCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: LQRITRQKVQFSIESRVFLNTCP*ATFQKP
Trigger: GGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAG...AAACACTCGGCTTTCTATAGAAAATTGCACTTTTTGTCGAGTAATCCTCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTATTTGAAGCACAGCTATaGCTAGGGCAGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLFEAQL*LGQALL
Trigger: CAGCAGTGCCTGCCCTAGTCATAGCTGTGCTTCAAA...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACTTTGAAGCACAGCTATaGCTAGGGCAGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYFEAQL*LGQALL
Trigger: CAGCAGTGCCTGCCCTAGTCATAGCTGTGCTTCAAA...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTATCCACCTGTGGGATCTaGCTCCAATTCCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLSTCGI*LQFQVD
Trigger: GTCTACCTGGAATTGGAGTCAGATCCCACAGGTGGA...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp ACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATAACGTTGAGGTCAGGAGTTTaGGACCAGCCTGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: TLYHYKNSHKELNILSITLRSGV*DQPGQQ
Trigger: CTGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAA...CGTTATGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCGTAGACTCCAACTCATaGCCTCAAGGGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: CSTLYHYKNSHKELNILSVDSNS*PQGILP
Trigger: TGGGAGGATCCCTTGAGGTCATGAGTTGGAGTCTAC...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACTTGCTGTGGTGCAGCTaGATGATCTGCGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYLLWCS*MICALM
Trigger: CATCAACGCGCAGATCATGCAGCTGCACCACAGCAA...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATTTGCTGTGGTGCAGCTaGATGATCTGCGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDLLWCS*MICALM
Trigger: CATCAACGCGCAGATCATGCAGCTGCACCACAGCAA...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCTTGCTGTGGTGCAGCTaGATGATCTGCGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: CSTLYHYKNSHKELNILSLLWCS*MICALM
Trigger: CATCAACGCGCAGATCATGCAGCTGCACCACAGCAA...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCTTTGCCTTTAACTTCTaGTTTCCTGAAATTTACCAC +
Preference number: 4 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFFAFNF*FPEIYH
Trigger: GTGGTAAATTTCAGGAAAGCAGAAGTTAAAGGCAAA...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATACATGCCTTGCCCTGTaGATCTCTTCCATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDTCLAL*ISSIWL
Trigger: CAGCCAGATGGAAGAGATGCACAGGGCAAGGCATGT...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTAATACCCCTTCCCACATaGCTTGCCCTGTGCATCTCT +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLIPLPT*LALCIS
Trigger: AGAGATGCACAGGGCAAGGCATGTGGGAAGGGGTAT...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTCACCCAGACTGGAGTaGAGTGTAGACTCACACTGT +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHSPRLE*SVDSHC
Trigger: ACAGTGTGAGTCTACACTGCACTCCAGTCTGGGTGA...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATAGCAGAGAGGCAAACTTaGAATCACCGTGACGCTGGG +
Preference number: 4 (lower is better)
Translates to: NIKKCYNRAAYCILQYSIAERQT*NHRDAG
Trigger: CCCAGCGTCACGGTGATTCCAAGTTTGCCTCTCTGC...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 72 bp CTCAATCCTTGCTTGGTCTCTTGGCTCCTAAACCCCTaGAAGTATCTTTGGTTTGCCAATGAAATGATTGGT +
Preference number: 4 (lower is better)
Translates to: LNPCLVSWLLNP*KYLWFANEMIG
Trigger: ACCAATCATTTCATTGGCAAACCAAAGATACTTCAAGGGGTTTAGGAGCCAAGAGACCAAGCAAGGATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACAACCAAAGTCACGTTTaGTGGCTTCCAGCAACTCCC +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYNQSHV*WLPATP
Trigger: GGGAGTTGCTGGAAGCCATCAAACGTGACTTTGGTT...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAAGTCCCCGTTCCTTATTaGAACCAAGCCAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSEVPVPY*NQANPN
Trigger: GTTGGGGTTGGCTTGGTTTCAATAAGGAACGGGGAC...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATCTATACAGGAACATTTaGCCTAACAAAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNLYRNI*PNKNHW
Trigger: CCAGTGGTTTTTGTTAGGTCAAATGTTCCTGTATAG...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp ACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATAACGAACTTGGAATCACCGTaGCGCTGGGCATCGAGACTA +
Preference number: 4 (lower is better)
Translates to: TLYHYKNSHKELNILSITNLESP*RWASRL
Trigger: TAGTCTCGATGCCCAGCGTCACGGTGATTCCAAGTT...CGTTATGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCGCCCAGACGCACAAATaGACAAGAACCTCATGTCCT +
Preference number: 4 (lower is better)
Translates to: CSTLYHYKNSHKELNILSAQTHK*TRTSCP
Trigger: AGGACATGAGGTTCTTGTTCATTTGTGCGTCTGGGC...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp CTGCAGAGGATTACTCGACAAAAAGTGCAATTTTCTATAGAAAGCCGAGTGTTTTGCTGTGTTAACTTCTaGGCCTTGGGGATACCCATA +
Preference number: 4 (lower is better)
Translates to: LQRITRQKVQFSIESRVFCCVNF*ALGIPI
Trigger: TATGGGTATCCCCAAGGCTCAGAAGTTAACACAGCA...AAACACTCGGCTTTCTATAGAAAATTGCACTTTTTGTCGAGTAATCCTCTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TGTAGAGGGAAATTTACAGCACTAAGTGCCCACAAGAGAAAGCAGGAAAGATCTGAAGAAGGCTTCAGATaGTCAAACTTCTCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: CRGKFTALSAHKRKQERSEEGFR*SNFSKL
Trigger: TAGCTTGGAGAAGTTTGATCATCTGAAGCCTTCTTC...AGATCTTTCCTGCTTTCTCTTGTGGGCACTTAGTGCTGTAAATTTCCCTCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp TGTAGAGGGAAATTTACAGCACTAAGTGCCCACAAGAGAAAGCAGGAAAGATCTTTTGCTGTTGAAGTTTaGCTTTACTGTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: CRGKFTALSAHKRKQERSFAVEV*LYCAGE
Trigger: CTCACCTGCACAGTAAAGGCAAACTTCAACAGCAAA...AGATCTTTCCTGCTTTCTCTTGTGGGCACTTAGTGCTGTAAATTTCCCTCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCGTCTCAAGCATGAGCTaGCCAATTCTCCTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: CSTLYHYKNSHKELNILSVSSMS*PILLAW
Trigger: CCAAGCAAGGAGAATTGGGCAGCTCATGCTTGAGAC...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACACCCTAGACAGGTCATaGCAACTTCACATCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHTLDRS*QLHIPF
Trigger: GAAAGGGATGTGAAGTTGGCATGACCTGTCTAGGGT...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATGATTATCTCAACAGATaGAGAAAAGGCCTTGGACAA +
Preference number: 4 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNDYLNR*RKGLGQ
Trigger: TTGTCCAAGGCCTTTTCTGCATCTGTTGAGATAATC...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACATCAATCCCCAGCAGTaGAATAAGGCCTTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHINPQQ*NKAFGF
Trigger: GAACCCAAAGGCCTTATTCCACTGCTGGGGATTGAT...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444946.6
CDS-3UTR CCA 90 bp TCTCTCCCCATTACATGTTTCCCAAATTTGTTATTTCCTAAATCACGGGGCCTTAAGTCCACATACCCCTaGTTTTATCAACCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLPITCFPNLLFPKSRGLKSTYP*FYQPSS
Trigger: AGAGCTCGGTTGATAAAACCAGGGGTATGTGGACTT...AAGGCCCCGTGATTTAGGAAATAACAAATTTGGGAAACATGTAATGGGGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp ACTTCAAACACAATCAGGCTGAAATACTGCATTTTTCCACTAGATGCCTCCAGTGAAGAGAAAGGTTCCTaGTGTCAGATGTTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: TSNTIRLKYCIFPLDASSEEKGS*CQMLPY
Trigger: GTAAGGCAACATCTGACACCAGGAACCTTTCTCTTC...ACTGGAGGCATCTAGTGGAAAAATGCAGTATTTCAGCCTGATTGTGTTTGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTACAGACCCCCACCAAATaGATTCACACAGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLQTPTK*IHTDVR
Trigger: TCTGACGTCTGTGTGAATCCATTTGGTGGGGGTCTG...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATTGTCAAACCTCTCTGTaGATATGCTGTGTTAACTTC +
Preference number: 4 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNCQTSL*ICCVNF
Trigger: GAAGTTAACACAGCATATCCACAGAGAGGTTTGACA...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAATGCAGAAAAGGCCTTaGACAAAATTCAACAGCCCT +
Preference number: 4 (lower is better)
Translates to: LELEIPFDPAIPLLGIYPMQKRP*TKFNSP
Trigger: AGGGCTGTTGAATTTTGTCCAAGGCCTTTTCTGCAT...TGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp TGGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACTCCTCAATAAAATACTaGCAAACTGAATCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WKTVWRFLRDLELEIPFDSSIKY*QTESSS
Trigger: GCTGCTGGATTCAGTTTGCCAGTATTTTATTGAGGA...GTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp CTTGCCCGTCTATTTAAACAGTCACGACCTTCCTTAGAGAGGCAAGCAGTAATCCTCCTGAATGACTACTaGGTACATAACAAAATGAAG +
Preference number: 4 (lower is better)
Translates to: LARLFKQSRPSLERQAVILLNDY*VHNKMK
Trigger: CTTCATTTTGTTATGTACCCAGTAGTCATTCAGGAG...GATTACTGCTTGCCTCTCTAAGGAAGGTCGTGACTGTTTAAATAGACGGGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACGGCTGTAACATCTCCTaGAAAACTCGGAACCGGTAC +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYGCNIS*KTRNRY
Trigger: GTACCGGTTCCGAGTTTTCCAGGAGATGTTACAGCC...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546260.5
3UTR CAA 72 bp TCAACGAGACAGAAAGTTAACAAGGATATCCAGGAATaGAATTCAGCTCTGCACCAAGCAGACCTAATAGAC +
Preference number: 4 (lower is better)
Translates to: STRQKVNKDIQE*NSALHQADLID
Trigger: GTCTATTAGGTCTGCTTGGTGCAGAGCTGAATTCAATTCCTGGATATCCTTGTTAACTTTCTGTCTCGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTACCTTGCAGTGGATCCTaGTTTGGACAAGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLPCSGS*FGQAAI
Trigger: AATTGCTGCTTGTCCAAATCAGGATCCACTGCAAGG...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCACCTTGCAGTGGATCCTaGTTTGGACAAGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSAPCSGS*FGQAAI
Trigger: AATTGCTGCTTGTCCAAATCAGGATCCACTGCAAGG...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATATGACCACCACCATTaGACTTCAGTGCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSAYDHHH*TSVQAE
Trigger: TTCAGCCTGCACTGAAGTTCAATGGTGGTGGTCATA...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTATATGACCACCACCATTaGACTTCAGTGCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLYDHHH*TSVQAE
Trigger: TTCAGCCTGCACTGAAGTTCAATGGTGGTGGTCATA...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATAATTGGGTCTCAAGCATaGGCTGCCCAATTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: NIKKCYNRAAYCILQYSIIGSQA*AAQFSL
Trigger: CAAGGAGAATTGGGCAGCTCATGCTTGAGACCCAAT...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATAATAAAGGAGAATCTTaGGTTTCCTTCACCGAAAAC +
Preference number: 4 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNNKGES*VSFTEN
Trigger: GTTTTCGGTGAAGGAAACTCAAGATTCTCCTTTATT...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATATGTTATTACAGATATaGCTGGAGATACAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNMLLQI*LEIQVL
Trigger: CAAGACCTGTATCTCCAGTCATATCTGTAATAACAT...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp GAACTTCCCCAATCTAGCAAGGGAGGACAACATTCAAATTCAGGAAATACAGAGAGACAGTGTCAGAATTaGATTATAGGACATCCAGCT +
Preference number: 4 (lower is better)
Translates to: ELPQSSKGGQHSNSGNTERQCQN*IIGHPA
Trigger: AGCTGGATGTCCTATAATTCAATTCTGACACTGTCT...CTCTGTATTTCCTGAATTTGAATGTTGTCCTCCCTTGCTAGATTGGGGAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TGGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACAAAATACTGGCAAACTaGATCCAGCAGCATATCAAA +
Preference number: 4 (lower is better)
Translates to: WKTVWRFLRDLELEIPFDKILAN*IQQHIK
Trigger: TTTGATATGCTGCTGGATTCAGTTTGCCAGTATTTT...GTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAAACAGAGTTTGAGATCTaGGAACGGAGAGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSETEFEI*ERRDCL
Trigger: GAGGCAGTCTCTCCGTTCTCAGATCTCAAACTCTGT...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATAGACGCAGAAGACAGGTaGTTTCTGCACTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: NIKKCYNRAAYCILQYSIDAEDR*FLHFQL
Trigger: CAGTTGGAAGTGCAGAAATCACCTGTCTTCTGCGTC...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAAGTCTCAAGCATGAGCTaGCCAATTCTCCTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSEVSSMS*PILLAW
Trigger: CCAAGCAAGGAGAATTGGGCAGCTCATGCTTGAGAC...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTACACCAAAACCCCATCTaGACATCACCATCACCAAAG +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLHQNPI*TSPSPK
Trigger: CTTTGGTGATGGTGATGTGCAGATGGGGTTTTGGTG...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp ATTTGTTATTTCCTAAATCACGGGGCCTTTTCCCGTAATTCAAGGTTCGTCTGTATGTGTAACGGAATGTaGCTCACAACAGTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: ICYFLNHGAFSRNSRFVCMCNGM*LTTVRQ
Trigger: TTGCCTTACTGTTGTGAGCCACATTCCGTTACACAT...ACAGACGAACCTTGAATTACGGGAAAAGGCCCCGTGATTTAGGAAATAACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CCA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATTATTACAGATATGACTaGAGATACAGGTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNYYRYD*RYRSWS
Trigger: AGACCAAGACCTGTATCTCCAGTCATATCTGTAATA...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp ACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATAACGTATAGGACATCCAGCTaGTGTCCACTGGACAACCTG +
Preference number: 4 (lower is better)
Translates to: TLYHYKNSHKELNILSITYRTSS*CPLDNL
Trigger: CAGGTTGTCCAGTGGACACCAGCTGGATGTCCTATA...CGTTATGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp CTTGCCCGTCTATTTAAACAGTCACGACCTTCCTTAGAGAGGCAAGCAGTAATCCCCTTGAAGTATCTTTaGTTTGCCAATGAAATGATT +
Preference number: 4 (lower is better)
Translates to: LARLFKQSRPSLERQAVIPLKYL*FANEMI
Trigger: AATCATTTCATTGGCAAACCAAAGATACTTCAAGGG...GATTACTGCTTGCCTCTCTAAGGAAGGTCGTGACTGTTTAAATAGACGGGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp CTGCAGAGGATTACTCGACAAAAAGTGCAATTTTCTATAGAAAGCCGAGTGTTTTACTGGGTGCAACAATaGGACACACTGAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: LQRITRQKVQFSIESRVFYWVQQ*DTLKDD
Trigger: GTCATCTTTCAGTGTGTCCCATTGTTGCACCCAGTA...AAACACTCGGCTTTCTATAGAAAATTGCACTTTTTGTCGAGTAATCCTCTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp TGGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCATCAATGATAGATTaGTTTAAGAAGATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: WKTVWRFLRDLELEIPFDPSMID*FKKMWH
Trigger: GTGCCACATCTTCTTAAACCAATCTATCATTGATGG...GTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATGGTGCTGGGAAAACTaGCTAGCCACATGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSAWCWEN*LATCRK
Trigger: CTTTCTACATGTGGCTAGCCAGTTTTCCCAGCACCA...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAACGGCACCTGGAAAATTaGGTCACTCCCACCCTAATA +
Preference number: 4 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSERHLEN*VTPTLI
Trigger: TATTAGGGTGGGAGTGACCCAATTTTCCAGGTGCCG...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp TGGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCTGGGTCATCCAGTGTaGGGTACATATATATTTATA +
Preference number: 4 (lower is better)
Translates to: WKTVWRFLRDLELEIPFDLGHPV*GTYIFI
Trigger: TATAAATATATATGTACCCCACACTGGATGACCCAG...GTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp AAGCACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTTGTTTAAAGGATATTTGCAGTTTTGCTGTTaGAGTTTGCCTTTACTGTGC +
Preference number: 4 (lower is better)
Translates to: KHYQQVYPTGWRTLFKGYLQFCC*SLPLLC
Trigger: GCACAGTAAAGGCAAACTTCAACAGCAAAACTGCAA...ATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp CTGCAGAGGATTACTCGACAAAAAGTGCAATTTTCTATAGAAAGCCGAGTGTTTGCACCCGATCTCGACTaGTTTACAATTTTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: LQRITRQKVQFSIESRVFAPDLD*FTILPL
Trigger: TAAAGGCAAAATTGTAAATCAGTCGAGATCGGGTGC...AAACACTCGGCTTTCTATAGAAAATTGCACTTTTTGTCGAGTAATCCTCTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTATCTTTGGTTTGCCAATaGAATGATTGGTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLSLVCQ*NDWWLG
Trigger: TCCCAGCCACCAATCATTTCATTGGCAAACCAAAGA...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp ACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATAACGGTCCCAGAAGCATCTTaGCAACAGAAGCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: TLYHYKNSHKELNILSITVPEAS*QQKHSH
Trigger: ATGAGAGTGCTTCTGTTGTCAAGATGCTTCTGGGAC...CGTTATGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACATGGGAATTGAACAATaGGAACACTTGGACACAGGA +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHMGIEQ*EHLDTG
Trigger: TCCTGTGTCCAAGTGTTCTCATTGTTCAATTCCCAT...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCCCACATGTAGAAAGCTaGAACTGGATCCCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: CSTLYHYKNSHKELNILSPHVES*NWIPSL
Trigger: TAAGGAAGGGATCCAGTTTCAGCTTTCTACATGTGG...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACCCTCCTTTCTCCTACTaGAAAAACCACCTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHPPFSY*KNHLFA
Trigger: TGCAAAAAGGTGGTTTTTGCAGTAGGAGAAAGGAGG...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATCTGACCTCCATTCTTTaGTCTCAGTTTCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDLTSIL*SQFLPE
Trigger: CTCAGGAAGAAACTGAGAGCAAAGAATGGAGGTCAG...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTATCAATGTTCTTTCCATaGCCACACAAAGGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLSMFFP*PHKGKQ
Trigger: CTGCTTGCCTTTGTGTGGGCATGGAAAGAACATTGA...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACAGGAACATAGCTCCTTaGCAGCAACAGAACAAAGCT +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYRNIAP*QQQNKA
Trigger: AGCTTTGTTCTGTTGCTGGCAAGGAGCTATGTTCCT...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATAGGCAGCAGAAATCTCTaGAGACTTCAATGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: NIKKCYNRAAYCILQYSIGSRNL*RLQCPC
Trigger: ACAGGGACATTGAAGTCTGCAGAGATTTCTGCTGCC...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCAGCTTGTAGGTCATCATaGAGATTGGGTCTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSAACRSS*RLGLKH
Trigger: ATGCTTGAGACCCAATCTCCATGATGACCTACAAGC...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTAAACCACTCAGCTACATaGAAACTGAACAACCTGCTC +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLNHSAT*KLNNLL
Trigger: GAGCAGGTTGTTCAGTTTCCATGTAGCTGAGTGGTT...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTAGCAACAGAACAAAGCTaGACGGAGAATGACTTTGAC +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLATEQS*TENDFD
Trigger: GTCAAAGTCATTCTCCGTCCAGCTTTGTTCTGTTGC...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp GAACTTCCCCAATCTAGCAAGGGAGGACAACATTCAAATTCAGGAAATACAGAGGTATACCCTACTGGTTaGAGAACTTTGTTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: ELPQSSKGGQHSNSGNTEVYPTG*RTLFKG
Trigger: TCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATAC...CTCTGTATTTCCTGAATTTGAATGTTGTCCTCCCTTGCTAGATTGGGGAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACACAAAAACCACTGGGTaGCATCTACCAGAAGTATCA +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYTKTTG*HLPEVS
Trigger: TGATACTTCTGGTAGATGTCACCCAGTGGTTTTTGT...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTATTGCAGTTTTGCTGTTaGAGTTTGCCTTTACTGTGC +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLLQFCC*SLPLLC
Trigger: GCACAGTAAAGGCAAACTTCAACAGCAAAACTGCAA...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACGCACCCGATCTCGACTaGTTTACAATTTTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYAPDLD*FTILPL
Trigger: TAAAGGCAAAATTGTAAATCAGTCGAGATCGGGTGC...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTAAACAATGGGACACACTaGAAGATGACTAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLNNGTH*KMTSMS
Trigger: TGACATGCTAGTCATCTTTCAGTGTGTCCCATTGTT...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCAGAGAAGTCCTTAAATaGCCTGATGGAGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: CSTLYHYKNSHKELNILSREVLK*PDGAEN
Trigger: GTTTTCAGCTCCATCAGGTCATTTAAGGACTTCTCT...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCACTCAGCCTTGATAGGTaGAGACTTACTTGTGTCATT +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSALSLDR*RLTCVI
Trigger: AATGACACAAGTAAGTCTTCACCTATCAAGGCTGAG...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCCTCCTTTCTCCTACTaGAAAAACCACCTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYPPFSY*KNHLFA
Trigger: TGCAAAAAGGTGGTTTTTGCAGTAGGAGAAAGGAGG...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp GAACTTCCCCAATCTAGCAAGGGAGGACAACATTCAAATTCAGGAAATACAGAGTTTGCCTTTAACTTCTaGTTTCCTGAAATTTACCAC +
Preference number: 4 (lower is better)
Translates to: ELPQSSKGGQHSNSGNTEFAFNF*FPEIYH
Trigger: GTGGTAAATTTCAGGAAAGCAGAAGTTAAAGGCAAA...CTCTGTATTTCCTGAATTTGAATGTTGTCCTCCCTTGCTAGATTGGGGAAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACCTTAATGTTCCTTTCTaGGGACCCCAAGTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHLNVPF*GPQVFR
Trigger: TCTAAAAACTTGGGGTCCGCAGAAAGGAACATTAAG...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATATTGTCTCAATCCTTaGTTGGTCTCTTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSAYCLNP*LVSWLL
Trigger: TAGGAGCCAAGAGACCAAGCAAGGATTGAGACAATA...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACATTTACAGCACTAAGTaGCCACAAGAGAAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYIYSTK*PQEKAG
Trigger: TCCTGCTTTCTCTTGTGGGCACTTAGTGCTGTAAAT...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTATCAGGCAGCAACATTTaGTGTTCAGCAATATTCGCT +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLSGSNI*CSAIFA
Trigger: AGCGAATATTGCTGAACAGCAAATGTTGCTGCCTGA...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp ACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATAACGCCAATTCTCCTTGCTTaGCGCCCTGCAAATAAACAT +
Preference number: 4 (lower is better)
Translates to: TLYHYKNSHKELNILSITPILLA*RPANKH
Trigger: ATGTTTATTTGCAGGGCGCCAAGCAAGGAGAATTGG...CGTTATGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAAGCTTGTAGGTCATCATaGAGATTGGGTCTCAAGCAT +
Preference number: 4 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSEACRSS*RLGLKH
Trigger: ATGCTTGAGACCCAATCTCCATGATGACCTACAAGC...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATAAAGAACCTCATGTCCTaGGACTTCATGGAGCACAAA +
Preference number: 4 (lower is better)
Translates to: NIKKCYNRAAYCILQYSIKNLMS*DFMEHK
Trigger: TTTGTGCTCCATGAAGTCCCAGGACATGAGGTTCTT...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp CTGCAGAGGATTACTCGACAAAAAGTGCAATTTTCTATAGAAAGCCGAGTGTTTAAATGCTCATCATCATaGGCCATCAGAGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: LQRITRQKVQFSIESRVFKCSSS*AIREMQ
Trigger: TTGCATTTCTCTGATGGCCCATGATGATGAGCATTT...AAACACTCGGCTTTCTATAGAAAATTGCACTTTTTGTCGAGTAATCCTCTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAGCCAAAATTGACAAATaGGATCTCATTAAACTCAAG +
Preference number: 4 (lower is better)
Translates to: LELEIPFDPAIPLLGIYPAKIDK*DLIKLK
Trigger: CTTGAGTTTAATGAGATCCCATTTGTCAATTTTGGC...TGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCAGCACTAAACATGGAATaGAACAACCAGTATCAGCCA +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSAALNME*NNQYQP
Trigger: TGGCTGATACTGGTTGTTCCATTCCATGTTTAGTGC...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTAAGAATGGAACCAAGCTaGAAAACACTCTGCAGGATA +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLRMEPS*KTLCRI
Trigger: TATCCTGCAGAGTGTTTTCCAGCTTGGTTCCATTCT...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 72 bp GAAATATATATATTGTCTCAATCCTTGCTTGGTCTCTaGGCTCCTAAACCCCTTGAAGTATCTTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: EIYILSQSLLGL*APKPLEVSLVC
Trigger: GCAAACCAAAGATACTTCAAGGGGTTTAGGAGCCAAGAGACCAAGCAAGGATTGAGACAATATATATATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
3UTR CAA 72 bp CACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTaGTTTAAAGGATATAAGTTGTGTGCCTTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: HYQQVYPTGWRT*FKGYKLCAFCK
Trigger: TTTACAGAAGGCACACAACTTATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp ACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATAACGACAAAAACCACTGGGTaGCATCTACCAGAAGTATCA +
Preference number: 4 (lower is better)
Translates to: TLYHYKNSHKELNILSITTKTTG*HLPEVS
Trigger: TGATACTTCTGGTAGATGTCACCCAGTGGTTTTTGT...CGTTATGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCACTATACAGGAACATTTaGCCTAACAAAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSALYRNI*PNKNHW
Trigger: CCAGTGGTTTTTGTTAGGTCAAATGTTCCTGTATAG...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR TCA 90 bp GAGAAGGAAACCAGCAAGCTGATAAGCAAGAAGGTCATAACAGTTTCAAACAATAATAAAGGAGAATCTTaGGTTTCCTTCACCGAAAAC +
Preference number: 4 (lower is better)
Translates to: EKETSKLISKKVITVSNNNKGES*VSFTEN
Trigger: GTTTTCGGTGAAGGAAACTCAAGATTCTCCTTTATT...ATTGTTTGAAACTGTTATGACCTTCTTGCTTATCAGCTTGCTGGTTTCCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp ACAATCAGGCTGAAATACTGCATTTTTCCACTAGATGCCTCCAGTCAACAAGATCGATTATCTTCCTTGTaGAAACCACTAACGAATAAA +
Preference number: 4 (lower is better)
Translates to: TIRLKYCIFPLDASSQQDRLSSL*KPLTNK
Trigger: TTTATTCGTTAGTGGTTTGCACAAGGAAGATAATCG...ATCTTGTTGACTGGAGGCATCTAGTGGAAAAATGCAGTATTTCAGCCTGATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR GCA 90 bp ATTTGTTATTTCCTAAATCACGGGGCCTTTTCCCGTAATTCAAGGTTCGTCTGTAGTAAAAGAAAGCTCTaGAGGTACTCAATCACTTAT +
Preference number: 4 (lower is better)
Translates to: ICYFLNHGAFSRNSRFVCSKRKL*RYSITY
Trigger: ATAAGTGATTGAGTACCTGCAGAGCTTTCTTTTACT...ACAGACGAACCTTGAATTACGGGAAAAGGCCCCGTGATTTAGGAAATAACAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR GCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATACCAGAAGTATCACTaGAGAGGATTACTCGACAAA +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSAYQKYH*RGLLDK
Trigger: TTTGTCGAGTAATCCTCTGCAGTGATACTTCTGGTA...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCTACCAGAAGTATCACTaGAGAGGATTACTCGACAAA +
Preference number: 4 (lower is better)
Translates to: CSTLYHYKNSHKELNILSYQKYH*RGLLDK
Trigger: TTTGTCGAGTAATCCTCTGCAGTGATACTTCTGGTA...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp ACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATAACGTTTGCTGTTGAAGTTTaGCTTTACTGTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: TLYHYKNSHKELNILSITFAVEV*LYCAGE
Trigger: CTCACCTGCACAGTAAAGGCAAACTTCAACAGCAAA...CGTTATGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR GCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCACTTAATGTTCCTTTCTaGGGACCCCAAGTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSALNVPF*GPQVFR
Trigger: TCTAAAAACTTGGGGTCCGCAGAAAGGAACATTAAG...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp CTGCAGAGGATTACTCGACAAAAAGTGCAATTTTCTATAGAAAGCCGAGTGTTTAAACACCAAAAGCAATaGCAACAGAAGCCAAAATTG +
Preference number: 4 (lower is better)
Translates to: LQRITRQKVQFSIESRVFKHQKQ*QQKPKL
Trigger: CAATTTTGGCTTCTGTTGCCATTGCTTTTGGTGTTT...AAACACTCGGCTTTCTATAGAAAATTGCACTTTTTGTCGAGTAATCCTCTGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp GAGAAGGAAACCAGCAAGCTGATAAGCAAGAAGGTCATAACAGTTTCAAACAATAGCTTCCAAGAAATATaGGACTATGTGAAAAGACCA +
Preference number: 4 (lower is better)
Translates to: EKETSKLISKKVITVSNNSFQEI*DYVKRP
Trigger: TGGTCTTTTCACATAGTCCCATATTTCTTGGAAGCT...ATTGTTTGAAACTGTTATGACCTTCTTGCTTATCAGCTTGCTGGTTTCCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCAGTATTGAGTGGTATGTaGCAACAGCAAAAACACTTT +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSAVLSGM*QQQKHF
Trigger: AAAGTGTTTTTGCTGTTGTCACATACCACTCAATAC...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATAGAAGAATCAATATCGTaGAAATGGCTATACTGCCCA +
Preference number: 4 (lower is better)
Translates to: NIKKCYNRAAYCILQYSIEESIS*KWLYCP
Trigger: TGGGCAGTATAGCCATTTTCACGATATTGATTCTTC...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR TCA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACATACAGTCGAGTCATaGTGGTGGTTTTTAATCCAT +
Preference number: 4 (lower is better)
Translates to: NIKKCYNRAAYCILQYSIHTVES*WWFLIH
Trigger: ATGGATTAAAAACCACCATCATGACTCGACTGTATG...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp ACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATAACGAAACTCAAGAGCTTCTaGACAGCAAAAGAAACTACC +
Preference number: 4 (lower is better)
Translates to: TLYHYKNSHKELNILSITKLKSF*TAKETT
Trigger: GGTAGTTTCTTTTGCTGTGCAGAAGCTCTTGAGTTT...CGTTATGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp ACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATAACGACTATACTACAAGGCTaGAGTAACCAAAACAGCATG +
Preference number: 4 (lower is better)
Translates to: TLYHYKNSHKELNILSITTILQG*SNQNSM
Trigger: CATGCTGTTTTGGTTACTGCAGCCTTGTAGTATAGT...CGTTATGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp AAGCACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTTGTTTAAAGGATATACTCCCATTCACAACTaGCTCAAAGAGAATAAAATA +
Preference number: 4 (lower is better)
Translates to: KHYQQVYPTGWRTLFKGYTPIHN*LKENKI
Trigger: TATTTTATTCTCTTTGAGGCAGTTGTGAATGGGAGT...ATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR GCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATGGCTTCCATTTGTATaGAATATCTTTCTCCATACC +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSAWLPFV*NIFLHT
Trigger: GGTATGGAGAAAGATATTGCATACAAATGGAAGCCA...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCAGCCGAGTGTTTCCCTTaGGAAAGTGTTAATATTTTA +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSAAECFP*ESVNIL
Trigger: TAAAATATTAACACTTTCCCAAGGGAAACACTCGGC...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCAGTGATTTACAATTTTaGTATACAGCCATACCACCC +
Preference number: 4 (lower is better)
Translates to: CSTLYHYKNSHKELNILSSDLQF*YTAIPP
Trigger: GGGTGGTATGGCTGTATACCAAAATTGTAAATCACT...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACAGTGATTTACAATTTTaGTATACAGCCATACCACCC +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYSDLQF*YTAIPP
Trigger: GGGTGGTATGGCTGTATACCAAAATTGTAAATCACT...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACGATGATGAAACAACATaGCAAATGTATGATGCTAAG +
Preference number: 4 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHDDETT*QMYDAK
Trigger: CTTAGCATCATACATTTGCCATGTTGTTTCATCATC...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CCA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAAACATTGTTTAATATTTaGATATGGGCCCAGACGCAC +
Preference number: 4 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSETLFNI*IWAQTH
Trigger: GTGCGTCTGGGCCCATATCCAAATATTAAACAATGT...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTATTAACTTCTGAGCCTTaGGGATACCCATATTTACAA +
Preference number: 4 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLLTSEP*GYPYLQ
Trigger: TTGTAAATATGGGTATCCCCAAGGCTCAGAAGTTAA...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACATAAAATGCCAGAGTTaGCACCTTAAGATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYIKCQS*HLKILF
Trigger: AAAGAGGATCTTAAGGTGCCAACTCTGGCATTTTAT...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATGGTTTAAGAAGATGTaGCACATATACACCATGGAA +
Preference number: 4 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSAWFKKM*HIYTME
Trigger: TTCCATGGTGTATATGTGCCACATCTTCTTAAACCA...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp ACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCAATATCAGACTGAATaGGCAAAAACTGGAAGCATT +
Preference number: 4 (lower is better)
Translates to: TSRNATIEQLTVFCSTLYQYQTE*AKTGSI
Trigger: AATGCTTCCAGTTTTTGCCCATTCAGTCTGATATTG...GTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CCA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATGATGATGAAACAACATaGCAAATGTATGATGCTAAG +
Preference number: 4 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDDDETT*QMYDAK
Trigger: CTTAGCATCATACATTTGCCATGTTGTTTCATCATC...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR CAA 72 bp AATATTCCAATAGGAGATAAACCTATGTACACAGAGTaGCTCACCCCAGCATTATCTGTAGTAACAATTAGA +
Preference number: 4 (lower is better)
Translates to: NIPIGDKPMYTE*LTPALSVVTIR
Trigger: TCTAATTGTTACTACAGATAATGCTGGGGTGAGCAACTCTGTGTACATAGGTTTATCTCCTATTGGAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
3UTR CAA 72 bp TATATTTATTGTGGCACTGTTCACAATAGCAAAGACTaGGAACCAACCCAAATGTCCATCAATGATAGATTG +
Preference number: 4 (lower is better)
Translates to: YIYCGTVHNSKD*EPTQMSINDRL
Trigger: CAATCTATCATTGATGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAACAGTGCCACAATAAATATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS GCA 90 bp AGGGGCGGGGCTACCTCAGGTCCCGCCCGCGGCAGGCCTGTGGGCTaGGAGGAGGAGCTTTGCCTAGCTTGCAGGCAGCGCAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: RGGATSGPARGRPVG*EEELCLACRQRRAD
Trigger: GTCTGCCCTGCGCTGCCTGCAAGCTAGGCAAAGCTCCTCCTCGCAGCCCACAGGCCTGCCGCGGGCGGGACCTGAGGTAGCCCCGCCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CCA 90 bp AGTTCTCCTCCACGGAGAGGCCCGTCCGTATGGGGCCTGGCTCCCTaGGGTCGCCTCTGCCGGGGACTGCCTCCCGCCGCTCAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: SSPPRRGPSVWGLAP*GRLCRGLPPAAQPG
Trigger: TCCAGGCTGAGCGGCGGGAGGCAGTCCCCGGCAGAGGCGACCCCAGGGAGCCAGGCCCCATACGGACGGGCCTCTCCGTGGAGGAGAACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452684.2
ENST00000546260.5
CDS GCA 90 bp TCAGGTCCCGCCCGCGGCAGGCCTGTGGGCTGCGAGGAGGAGCTTTaGCTAGCTTGCAGGCAGCGCAGGGCAGACGGCGGCAGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: SGPARGRPVGCEEEL*LACRQRRADGGRRS
Trigger: GCTTCTCCTGCCGCCGTCTGCCCTGCGCTGCCTGCAAGCTAGGCAAAGCTCCTCCTCGCAGCCCACAGGCCTGCCGCGGGCGGGACCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CCA 90 bp TGGAGGAAGCCGGTCAGGCCAAGCCGCGAGGAGCCGCGGGATCCCTaGAACCCTGCGGCTCCCGCGTTCCCTGACCTGGTGCTACAGCCC +
Preference number: 5 (lower is better)
Translates to: WRKPVRPSREEPRDP*NPAAPAFPDLVLQP
Trigger: GGGCTGTAGCACCAGGTCAGGGAACGCGGGAGCCGCAGGGTTCCAGGGATCCCGCGGCTCCTCGCGGCTTGGCCTGACCGGCTTCCTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS TCA 90 bp CGAGGAGCCGCGGGATCCCTGGAACCCTGCGGCTCCCGCGTTCCCTaGCCTGGTGCTACAGCCCCACCCTCTCCTCTCCCGATGTGCGCA +
Preference number: 5 (lower is better)
Translates to: RGAAGSLEPCGSRVP*PGATAPPSPLPMCA
Trigger: TGCGCACATCGGGAGAGGAGAGGGTGGGGCTGTAGCACCAGGTCAGGGAACGCGGGAGCCGCAGGGTTCCAGGGATCCCGCGGCTCCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS GCA 90 bp CGCGGGATCCCTGGAACCCTGCGGCTCCCGCGTTCCCTGACCTGGTaGTACAGCCCCACCCTCTCCTCTCCCGATGTGCGCACTCCGTCC +
Preference number: 5 (lower is better)
Translates to: RGIPGTLRLPRSLTW*YSPTLSSPDVRTPS
Trigger: GGACGGAGTGCGCACATCGGGAGAGGAGAGGGTGGGGCTGTAGCACCAGGTCAGGGAACGCGGGAGCCGCAGGGTTCCAGGGATCCCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CCA 90 bp GATCCTGTGGTCATCGTCTCGGCGGCGCGGACCATCATAGGTGAGTaGCCGGCGGGAGCCGCGCAGAGTCCGAGGCGCCTGCTGCTTCGG +
Preference number: 5 (lower is better)
Translates to: DPVVIVSAARTIIGE*PAGAAQSPRRLLLR
Trigger: CCGAAGCAGCAGGCGCCTCGGACTCTGCGCGGCTCCCGCCGGCCACTCACCTATGATGGTCCGCGCCGCCGAGACGATGACCACAGGATC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS TCA 90 bp CTCAGATCCTGTGGTCATCGTCTCGGCGGCGCGGACCATCATAGGTaGGTGGCCGGCGGGAGCCGCGCAGAGTCCGAGGCGCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LRSCGHRLGGADHHR*VAGGSRAESEAPAA
Trigger: AGCAGCAGGCGCCTCGGACTCTGCGCGGCTCCCGCCGGCCACTCACCTATGATGGTCCGCGCCGCCGAGACGATGACCACAGGATCTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CCA 90 bp TCCCTGGGGTCGCCTCTGCCGGGGACTGCCTCCCGCCGCTCAGCCTaGAACCTACCCTTGGCCAACGCCTCCTGGTACTTCTCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: SLGSPLPGTASRRSA*NLPLANASWYFSSV
Trigger: CACCGAGGAGAAGTACCAGGAGGCGTTGGCCAAGGGTAGGTTCCAGGCTGAGCGGCGGGAGGCAGTCCCCGGCAGAGGCGACCCCAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452684.2
ENST00000546260.5
CDS CCA 90 bp CCCCACCCTCTCCTCTCCCGATGTGCGCACTCCGTCCCTCGTGCTTaGATTGGCTCCCGGGGTAGAGCCATCGCGTGGCCTGCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: PHPLLSRCAHSVPRA*IGSRGRAIAWPASP
Trigger: GGGAGAGGCAGGCCACGCGATGGCTCTACCCCGGGAGCCAATCCAAGCACGAGGGACGGAGTGCGCACATCGGGAGAGGAGAGGGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS TCA 90 bp ACCTCCCGAAGCCGCCGAGAGCAAAAGGACCCATCAGAGCTGTGCTaGGACCCGCCGCGGGCCGGGCTCGCACTCGAGATTCTCGCCCGT +
Preference number: 5 (lower is better)
Translates to: TSRSRREQKDPSELC*DPPRAGLALEILAR
Trigger: ACGGGCGAGAATCTCGAGTGCGAGCCCGGCCCGCGGCGGGTCTCAGCACAGCTCTGATGGGTCCTTTTGCTCTCGGCGGCTTCGGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS GCA 90 bp GCCCGCGGCAGGCCTGTGGGCTGCGAGGAGGAGCTTTGCCTAGCTTaGAGGCAGCGCAGGGCAGACGGCGGCAGGAGAAGCAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: ARGRPVGCEEELCLA*RQRRADGGRRSKMN
Trigger: ATTCATCTTGCTTCTCCTGCCGCCGTCTGCCCTGCGCTGCCTGCAAGCTAGGCAAAGCTCCTCCTCGCAGCCCACAGGCCTGCCGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CCA 90 bp TCGCACCGAGACGCTCCTAGCAAGCCCCTCACGCGAGCGAATGACTaGCGCCAGGAGAAACGCATAGGACCTCCCGAAGCCGCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: SHRDAPSKPLTRAND*RQEKRIGPPEAAES
Trigger: GCTCTCGGCGGCTTCGGGAGGTCCTATGCGTTTCTCCTGGCGCCAGTCATTCGCTCGCGTGAGGGGCTTGCTAGGAGCGTCTCGGTGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS TCA 90 bp AACATGCTGCTAGTGCTGGTGCTACCGCTGATGCCGCCGATCTGCTaGAGCCGCTGCCGAAGCCACCACAGCCACGAGTGCCGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: NMLLVLVLPLMPPIC*SRCRSHHSHECRSC
Trigger: GCAGGAGCGGCACTCGTGGCTGTGGTGGCTTCGGCAGCGGCTTCAGCAGATCGGCGGCATCAGCGGTAGCACCAGCACTAGCAGCATGTT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337404.8
CDS CCA 90 bp TCCGTCCCTCGTGCTTGGATTGGCTCCCGGGGTAGAGCCATCGCGTaGCCTGCCTCTCCCATTGGTTGGCGTAGGGAGGTGTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SVPRAWIGSRGRAIA*PASPIGWRREVFSS
Trigger: GGAGGAGAACACCTCCCTACGCCAACCAATGGGAGAGGCAGGCCACGCGATGGCTCTACCCCGGGAGCCAATCCAAGCACGAGGGACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS GCA 90 bp CAGATACCCCAAAACCGGAGCCAGCTGCCTGCTGGTGCCGCACACTaGCCGGCTCAACATGCTGCTAGTGCTGGTGCTACCGCTGATGCC +
Preference number: 5 (lower is better)
Translates to: QIPQNRSQLPAGAAH*PAQHAASAGATADA
Trigger: GGCATCAGCGGTAGCACCAGCACTAGCAGCATGTTGAGCCGGGCAGTGTGCGGCACCAGCAGGCAGCTGGCTCCGGTTTTGGGGTATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337404.8
ENST00000367054.6
ENST00000367055.8
ENST00000444946.6
ENST00000452684.2
ENST00000538183.7
ENST00000546260.5
CDS GCA 90 bp CTGTGCTTCTGCCTGGAGCCCAGATACCCCAAAACCGGAGCCAGCTaGCTGCTGGTGCCGCACACTGCCCGGCTCAACATGCTGCTAGTG +
Preference number: 5 (lower is better)
Translates to: LCFCLEPRYPKTGAS*LLVPHTARLNMLLV
Trigger: CACTAGCAGCATGTTGAGCCGGGCAGTGTGCGGCACCAGCAGGCAGCTGGCTCCGGTTTTGGGGTATCTGGGCTCCAGGCAGAAGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337404.8
ENST00000367054.6
ENST00000367055.8
ENST00000444946.6
ENST00000452684.2
ENST00000538183.7
ENST00000546260.5
CDS GCA 90 bp TTGCAGGCAGCGCAGGGCAGACGGCGGCAGGAGAAGCAAGATGAATaGAGGCTCAGATCCTGTGGTCATCGTCTCGGCGGCGCGGACCAT +
Preference number: 5 (lower is better)
Translates to: LQAAQGRRRQEKQDE*RLRSCGHRLGGADH
Trigger: ATGGTCCGCGCCGCCGAGACGATGACCACAGGATCTGAGCCTGCATTCATCTTGCTTCTCCTGCCGCCGTCTGCCCTGCGCTGCCTGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS TCA 90 bp CCAGCAACTCCCCCTTGGCCAACGCCTCCTGGTACTTCTCCTCGGTaGCGTTCAGGTTGTTCACGTAGGCCGCGTGGTGCTTGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: PATPPWPTPPGTSPR*RSGCSRRPRGACCG
Trigger: ACCACAGCAAGCACCACGCGGCCTACGTGAACAACCTGAACGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAAGGGGGAGTTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000367054.6
ENST00000401980.3
CDS TCA 90 bp CCTGGAACCTACCCTTGGCCAACGCCTCCTGGTACTTCTCCTCGGTaGCGTTCAGGTTGTTCACGTAGGCCGCGTGGTGCTTGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: PGTYPWPTPPGTSPR*RSGCSRRPRGACCG
Trigger: ACCACAGCAAGCACCACGCGGCCTACGTGAACAACCTGAACGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAAGGGTAGGTTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452684.2
ENST00000546260.5
CDS-3UTR CAA 90 bp GTAAGACACCACTCCCACTTCTATCAGGAGGTGACCCTGACACTCAGAGACACCGCCTGGAACCTACCCTaGGCCAACGCCTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: VRHHSHFYQEVTLTLRDTAWNLP*ANASWY
Trigger: GTACCAGGAGGCGTTGGCCAAGGGTAGGTTCCAGGC...GGTGTCTCTGAGTGTCAGGGTCACCTCCTGATAGAAGTGGGAGTGGTGTCTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS CCA 90 bp AGACGTCAAGTCGGGGAACTCCAACATTGGGGTGTCCAGAAACACTaGGGTTTCAGGCGCTCTGTAAATGCGTCCGAGGTCCGCGGTTCT +
Preference number: 5 (lower is better)
Translates to: RRQVGELQHWGVQKH*GFRRSVNASEVRGS
Trigger: AGAACCGCGGACCTCGGACGCATTTACAGAGCGCCTGAAACCCCAGTGTTTCTGGACACCCCAATGTTGGAGTTCCCCGACTTGACGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS-3UTR CAA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCGCTGCCCAATTCTCCTaGCTTGGCGCCCTGCAAATA +
Preference number: 5 (lower is better)
Translates to: LETSLTRAPELLFRNPDPAAQFS*LGALQI
Trigger: TATTTGCAGGGCGCCAAGCAAGGAGAATTGGGCAGC...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCTCTCACTGGGGCTTGTaGGACAGTGGGTGTAGGACG +
Preference number: 5 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFSHWGL*DSGCRT
Trigger: CGTCCTACACCCACTGTCCAACAAGCCCCAGTGAGA...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp CTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCCATCAGGCAGAACCAAAGTCACGTTaGATGGCTTCCAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: LTTPIQHSVGSSGQGHQAEPKSR*MASSNS
Trigger: GGAGTTGCTGGAAGCCATCAAACGTGACTTTGGTTC...TGCCTGATGGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCAGGCATGAGAATCGCTaGAACTCAGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFRHENR*NSGGGG
Trigger: ACCTCCACCTCCTGAGTTCAAGCGATTCTCATGCCT...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp CTTGCCCGTCTATTTAAACAGTCACGACCTTCCTTAGAGAGGCAAGCAGTAATCAGAGATCCTCCTGCGTaGGCCTCCCAAAGCACAGAG +
Preference number: 5 (lower is better)
Translates to: LARLFKQSRPSLERQAVIRDPPA*ASQSTE
Trigger: CTCTGTGCTTTGGGAGGCCAACGCAGGAGGATCTCT...GATTACTGCTTGCCTCTCTAAGGAAGGTCGTGACTGTTTAAATAGACGGGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATCCCTTCCCACATGCCTaGCCCTGTGCATCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNPFPHA*PCASLP
Trigger: TGGAAGAGATGCACAGGGCAAGGCATGTGGGAAGGG...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp CCGGGAAGGCAAGGGGTCAGGGAATTCCCTTTCCTAGCCAAGGGAAGCTGTGACGGCAATAATCTGTGGTaGGTTAATGTTCTAAGATGT +
Preference number: 5 (lower is better)
Translates to: PGRQGVREFPFLAKGSCDGNNLW*VNVLRC
Trigger: ACATCTTAGAACATTAACCAACCACAGATTATTGCC...GTCACAGCTTCCCTTGGCTAGGAAAGGGAATTCCCTGACCCCTTGCCTTCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp GCATGCATACACACACACACATACACACACCGCTTTGGTACTCTTGTCTCTAATTCCAGCAACTCCCCTTaGGGTTCTCCACCACCGTTA +
Preference number: 5 (lower is better)
Translates to: ACIHTHTYTHRFGTLVSNSSNSP*GSPPPL
Trigger: TAACGGTGGTGGAGAACCCAAAGGGGAGTTGCTGGA...ATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATGTGTGTGTGTGTATGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp CTGCAGAGGATTACTCGACAAAAAGTGCAATTTTCTATAGAAAGCCGAGTGTTTGCCTGGAACCTACCCTaGGCCAACGCCTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: LQRITRQKVQFSIESRVFAWNLP*ANASWY
Trigger: GTACCAGGAGGCGTTGGCCAAGGGTAGGTTCCAGGC...AAACACTCGGCTTTCTATAGAAAATTGCACTTTTTGTCGAGTAATCCTCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546260.5
CDS-3UTR CAA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCATCAGGCAGCAACATTaGCTGTTCAGCAATATTCGC +
Preference number: 5 (lower is better)
Translates to: LETSLTRAPELLFRNPDPIRQQH*LFSNIR
Trigger: GCGAATATTGCTGAACAGCAAATGTTGCTGCCTGAT...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCACACGCCCATGGAGCCTaGCTCATTGCTAGCACAGCA +
Preference number: 5 (lower is better)
Translates to: LELEIPFDPAIPLLGIYPHAHGA*LIASTA
Trigger: TGCTGTGCTAGCAATGAGCAAGGCTCCATGGGCGTG...TGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATATCCAGCAACTCCCCCTaGGCCAACGCCTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: NIKKCYNRAAYCILQYSISSNSP*ANASWY
Trigger: GTACCAGGAGGCGTTGGCCAAGGGGGAGTTGCTGGA...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337404.8
CDS-3UTR CAA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCTTTGCAGTTTTGCTGTaGAAGTTTGCCTTTACTGTG +
Preference number: 5 (lower is better)
Translates to: LETSLTRAPELLFRNPDPFAVLL*KFAFTV
Trigger: CACAGTAAAGGCAAACTTCAACAGCAAAACTGCAAA...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACGGAGGTTGCAGTGAGTaGAGACTGTGCCACCGCACT +
Preference number: 5 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHGGCSE*RLCHRT
Trigger: AGTGCGGTGGCACAGTCTCAACTCACTGCAACCTCC...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS TCA 90 bp TTCTTCAGGAAGATTCTCCAGGTCCGTCAACAGTTTTCCCCTTCATaGCTTTGTGACAAAGCTTTCTTGTTCCACTATCCAGGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: FFRKILQVRQQFSPS*LCDKAFLFHYPGVP
Trigger: GGGAACACCTGGATAGTGGAACAAGAAAGCTTTGTCACAAAGTCATGAAGGGGAAAACTGTTGACGGACCTGGAGAATCTTCCTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS-3UTR CAA 90 bp CTAGAGACATCCTTAACACGTGCCCCTGAGCTACTTTTCAGAAACCCAGACCCCATCGTGGTTTACTTTTaGCAAGCCATGTATCTTTCA +
Preference number: 5 (lower is better)
Translates to: LETSLTRAPELLFRNPDPIVVYF*QAMYLS
Trigger: TGAAAGATACATGGCTTGCAAAAAGTAAACCACGAT...GGGGTCTGGGTTTCTGAAAAGTAGCTCAGGGGCACGTGTTAAGGATGTCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTAGCTGTAACATCTCCCTaGGCCAACGCCTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLAVTSP*ANASWY
Trigger: GTACCAGGAGGCGTTGGCCAAGGGAGATGTTACAGC...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444946.6
ENST00000538183.7
CDS-3UTR CAA 90 bp GAACTTCCCCAATCTAGCAAGGGAGGACAACATTCAAATTCAGGAAATACAGAGAGGTCATCATGGAGATaGGGTCTCAAGCATGAGCTG +
Preference number: 5 (lower is better)
Translates to: ELPQSSKGGQHSNSGNTERSSWR*GLKHEL
Trigger: CAGCTCATGCTTGAGACCCAATCTCCATGATGACCT...CTCTGTATTTCCTGAATTTGAATGTTGTCCTCCCTTGCTAGATTGGGGAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp TCCATTCTTTGCTCTCAGTTTCTTCCTGAGGGGCCTGGCCAGACCTTAATGTTCACTCATAGATGGGAATaGAACAATGAGAACACTTGG +
Preference number: 5 (lower is better)
Translates to: SILCSQFLPEGPGQTLMFTHRWE*NNENTW
Trigger: CCAAGTGTTCTCATTGTTCAATTCCCATCTATGAGT...GAACATTAAGGTCTGGCCAGGCCCCTCAGGAAGAAACTGAGAGCAAAGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS TCA 90 bp GAAGATTCTCCAGGTCCGTCAACAGTTTTCCCCTTCATGACTTTGTaGCAAAGCTTTCTTGTTCCACTATCCAGGTGTTCCCAACAAGTT +
Preference number: 5 (lower is better)
Translates to: EDSPGPSTVFPFMTL*QSFLVPLSRCSQQV
Trigger: AACTTGTTGGGAACACCTGGATAGTGGAACAAGAAAGCTTTGTCACAAAGTCATGAAGGGGAAAACTGTTGACGGACCTGGAGAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS-3UTR CAA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAAGCTGTAACATCTCCCTaGGCCAACGCCTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSEAVTSP*ANASWY
Trigger: GTACCAGGAGGCGTTGGCCAAGGGAGATGTTACAGC...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTAGCTGCCCAATTCTCCTaGCTTGGCGCCCTGCAAATA +
Preference number: 5 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLAAQFS*LGALQI
Trigger: TATTTGCAGGGCGCCAAGCAAGGAGAATTGGGCAGC...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp GAGAAGGAAACCAGCAAGCTGATAAGCAAGAAGGTCATAACAGTTTCAAACAATAAGACCAAGGCAAGATaGGAGGGTTTGGACTCCCAG +
Preference number: 5 (lower is better)
Translates to: EKETSKLISKKVITVSNNKTKAR*EGLDSQ
Trigger: CTGGGAGTCCAAACCCTCCAATCTTGCCTTGGTCTT...ATTGTTTGAAACTGTTATGACCTTCTTGCTTATCAGCTTGCTGGTTTCCTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp TGTAGAGGGAAATTTACAGCACTAAGTGCCCACAAGAGAAAGCAGGAAAGATCTTGTCTCAATCCTTGCTaGGTCTCTTGGCTCCTAAAC +
Preference number: 5 (lower is better)
Translates to: CRGKFTALSAHKRKQERSCLNPC*VSWLLN
Trigger: GTTTAGGAGCCAAGAGACCAAGCAAGGATTGAGACA...AGATCTTTCCTGCTTTCTCTTGTGGGCACTTAGTGCTGTAAATTTCCCTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAATCCAGCAACTCCCCTTaGGGTTCTCCACCACCGTTA +
Preference number: 5 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSESSNSP*GSPPPL
Trigger: TAACGGTGGTGGAGAACCCAAAGGGGAGTTGCTGGA...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATATGGAGCCTTGCTCATaGCTAGCACAGCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDMEPCS*LAQQSE
Trigger: CTCAGACTGCTGTGCTAGCAATGAGCAAGGCTCCAT...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAATCATCTCACTGGGGCTaGTTGGACAGTGGGTGTAGG +
Preference number: 5 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSESSHWG*LDSGCR
Trigger: CCTACACCCACTGTCCAACAAGCCCCAGTGAGATGA...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATGAACCAAAGTCACGTTaGATGGCTTCCAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDEPKSR*MASSNS
Trigger: GGAGTTGCTGGAAGCCATCAAACGTGACTTTGGTTC...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp AAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACTAGAACCAAAGTCACGTTaGATGGCTTCCAGCAACTCC +
Preference number: 5 (lower is better)
Translates to: KKCYNRAAYCILQYSIPLEPKSR*MASSNS
Trigger: GGAGTTGCTGGAAGCCATCAAACGTGACTTTGGTTC...TAGTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATAAGGCCTGTTGTTCCTaGCAGTGGATCCTGATTTGG +
Preference number: 5 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDKACCS*QWILIW
Trigger: CCAAATCAGGATCCACTGCAAGGAACAACAGGCCTT...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp CTTGCCCGTCTATTTAAACAGTCACGACCTTCCTTAGAGAGGCAAGCAGTAATCATCGTGGTTTACTTTTaGCAAGCCATGTATCTTTCA +
Preference number: 5 (lower is better)
Translates to: LARLFKQSRPSLERQAVIIVVYF*QAMYLS
Trigger: TGAAAGATACATGGCTTGCAAAAAGTAAACCACGAT...GATTACTGCTTGCCTCTCTAAGGAAGGTCGTGACTGTTTAAATAGACGGGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCAGTGGAATAAGGCCTTaGGGTTCTCCACCACCGTTA +
Preference number: 5 (lower is better)
Translates to: CSTLYHYKNSHKELNILSSGIRP*GSPPPL
Trigger: TAACGGTGGTGGAGAACCCAAAGGCCTTATTCCACT...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444946.6
CDS-3UTR CAA 90 bp ATTTGTTATTTCCTAAATCACGGGGCCTTTTCCCGTAATTCAAGGTTCGTCTGTTCCTGGTGTCAGATGTaGCCTTACAGGAAGTACTTT +
Preference number: 5 (lower is better)
Translates to: ICYFLNHGAFSRNSRFVCSWCQM*PYRKYF
Trigger: AAAGTACTTCCTGTAAGGCAACATCTGACACCAGGA...ACAGACGAACCTTGAATTACGGGAAAAGGCCCCGTGATTTAGGAAATAACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CAA 90 bp TGGAAGACAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCTTCAGTCTTCAATATaGAAACTGCTAAGTTACCCC +
Preference number: 5 (lower is better)
Translates to: WKTVWRFLRDLELEIPFDLQSSI*KLLSYP
Trigger: GGGGTAACTTAGCAGTTTCAATATTGAAGACTGAAG...GTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGTCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp GAACTTCCCCAATCTAGCAAGGGAGGACAACATTCAAATTCAGGAAATACAGAGCATACACACACCGCTTaGGTACTCTTGTCTCTAATA +
Preference number: 5 (lower is better)
Translates to: ELPQSSKGGQHSNSGNTEHTHTA*VLLSLI
Trigger: TATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATG...CTCTGTATTTCCTGAATTTGAATGTTGTCCTCCCTTGCTAGATTGGGGAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCATCAAAAGGTTCCACCTaGCCCGTCTATTTAAACAGT +
Preference number: 5 (lower is better)
Translates to: LELEIPFDPAIPLLGIYPSKGST*PVYLNS
Trigger: ACTGTTTAAATAGACGGGCAAGGTGGAACCTTTTGA...TGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATATCCAGGAATaGAATTCAGCTCTGCACCAA +
Preference number: 5 (lower is better)
Translates to: LELEIPFDPAIPLLGIYPKDIQE*NSALHQ
Trigger: TTGGTGCAGAGCTGAATTCAATTCCTGGATATCCTT...TGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp CTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGACTTTGACGAGTaGAGAGAAGAAGGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: LELEIPFDPAIPLLGIYPNDFDE*REEGFR
Trigger: TCTGAAGCCTTCTTCTCTCAACTCGTCAAAGTCATT...TGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACAAGGAACATAGCTCCTaGCCAGCAACAGAACAAAGC +
Preference number: 5 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHKEHSS*PATEQS
Trigger: GCTTTGTTCTGTTGCTGGCAAGGAGCTATGTTCCTT...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAACTCCCAGCACAGAGTTaGAGATCTGAGAACGGAGAG +
Preference number: 5 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSELPAQS*RSENGE
Trigger: CTCTCCGTTCTCAGATCTCAAACTCTGTGCTGGGAG...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp AACATCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATAAATGCCAGACTTGGGTaGGGTTCCAAGATGGCCGAA +
Preference number: 5 (lower is better)
Translates to: NIKKCYNRAAYCILQYSINARLG*GSKMAE
Trigger: TTCGGCCATCTTGGAACCCAACCCAAGTCTGGCATT...TATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp CTTGCCCGTCTATTTAAACAGTCACGACCTTCCTTAGAGAGGCAAGCAGTAATCAGAATCACTTGTTTTTaGAGAGACAGGATCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LARLFKQSRPSLERQAVIRITCF*RDRISF
Trigger: GAAAGAGATCCTGTCTCTCAAAAAACAAGTGATTCT...GATTACTGCTTGCCTCTCTAAGGAAGGTCGTGACTGTTTAAATAGACGGGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp TGTTATTTCCTAAATCACGGGGCCTTTTCCCGTAATTCAAGGTTCGTCTGTCTCTATCGATTATCTTCCTaGTGCAAACCACTAACGAAT +
Preference number: 5 (lower is better)
Translates to: CYFLNHGAFSRNSRFVCLYRLSS*CKPLTN
Trigger: ATTCGTTAGTGGTTTGCACAAGGAAGATAATCGATA...GAGACAGACGAACCTTGAATTACGGGAAAAGGCCCCGTGATTTAGGAAATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452684.2
CDS-3UTR CAA 90 bp TGTAGAGGGAAATTTACAGCACTAAGTGCCCACAAGAGAAAGCAGGAAAGATCTCACCTTTTTGCAGTTTaGCTGTTGAAGTTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: CRGKFTALSAHKRKQERSHLFAV*LLKFAF
Trigger: AAAGGCAAACTTCAACAGCAAAACTGCAAAAAGGTG...AGATCTTTCCTGCTTTCTCTTGTGGGCACTTAGTGCTGTAAATTTCCCTCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAAAGGTCATCATGGAGATaGGGTCTCAAGCATGAGCTG +
Preference number: 5 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSERSSWR*GLKHEL
Trigger: CAGCTCATGCTTGAGACCCAATCTCCATGATGACCT...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp GAGAAGGAAACCAGCAAGCTGATAAGCAAGAAGGTCATAACAGTTTCAAACAATATATTGTCTCAATCCTaGCTTGGTCTCTTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: EKETSKLISKKVITVSNNILSQS*LGLLAP
Trigger: AGGAGCCAAGAGACCAAGCAAGGATTGAGACAATAT...ATTGTTTGAAACTGTTATGACCTTCTTGCTTATCAGCTTGCTGGTTTCCTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp TGCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCTGTCCCAGAAGCATCTaGACAACAGAAGCACTCTCA +
Preference number: 5 (lower is better)
Translates to: CSTLYHYKNSHKELNILSCPRSI*TTEALS
Trigger: TGAGAGTGCTTCTGTTGTCAAGATGCTTCTGGGACA...GCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp CTGCAGAGGATTACTCGACAAAAAGTGCAATTTTCTATAGAAAGCCGAGTGTTTGCATGTCATAGGAACTaGAAAGCATTCGTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: LQRITRQKVQFSIESRVFACHRN*KAFVLL
Trigger: AAGGAGCACGAATGCTTTCAAGTTCCTATGACATGC...AAACACTCGGCTTTCTATAGAAAATTGCACTTTTTGTCGAGTAATCCTCTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp AAGCACTACCAGCAAGTATACCCTACTGGTTGGAGAACTTTGTTTAAAGGATATTTTGCAGTTTTGCTGTaGAAGTTTGCCTTTACTGTG +
Preference number: 5 (lower is better)
Translates to: KHYQQVYPTGWRTLFKGYFAVLL*KFAFTV
Trigger: CACAGTAAAGGCAAACTTCAACAGCAAAACTGCAAA...ATATCCTTTAAACAAAGTTCTCCAACCAGTAGGGTATACTTGCTGGTAGTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp CTGCAGAGGATTACTCGACAAAAAGTGCAATTTTCTATAGAAAGCCGAGTGTTTCACCTTTTTGCAGTTTaGCTGTTGAAGTTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: LQRITRQKVQFSIESRVFHLFAV*LLKFAF
Trigger: AAAGGCAAACTTCAACAGCAAAACTGCAAAAAGGTG...AAACACTCGGCTTTCTATAGAAAATTGCACTTTTTGTCGAGTAATCCTCTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATCAAAAGGTTCCACCTaGCCCGTCTATTTAAACAGT +
Preference number: 5 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSASKGST*PVYLNS
Trigger: ACTGTTTAAATAGACGGGCAAGGTGGAACCTTTTGA...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp TCAAGAAATGCTACAATAGAGCAGCTTACTGTATTCTGCAGTACTCTATACCACGCAGATCTGCAAACCTaGTTAGTTCAATACAAACCA +
Preference number: 5 (lower is better)
Translates to: SRNATIEQLTVFCSTLYHADLQT*LVQYKP
Trigger: TGGTTTGTATTGAACTAACAAGGTTTGCAGATCTGC...GTGGTATAGAGTACTGCAGAATACAGTAAGCTGCTCTATTGTAGCATTTCTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATCTTCAGTCTTCAATATaGAAACTGCTAAGTTACCCC +
Preference number: 5 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDLQSSI*KLLSYP
Trigger: GGGGTAACTTAGCAGTTTCAATATTGAAGACTGAAG...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp CTGATTCAGTCACAAAAACCCTTCTTGGATGAACAATACTTGTTCTTTTCAGAACATACACACACCGCTTaGGTACTCTTGTCTCTAATA +
Preference number: 5 (lower is better)
Translates to: LIQSQKPFLDEQYLFFSEHTHTA*VLLSLI
Trigger: TATTAGAGACAAGAGTACCAAAGCGGTGTGTGTATG...TTCTGAAAAGAACAAGTATTGTTCATCCAAGAAGGGTTTTTGTGACTGAATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp ACTAGAAAGGCATCCCTACAAGTCCCCAAAGTATATGGATGGAATATTTTTGATATCGTGGTTTACTTTTaGCAAGCCATGTATCTTTCA +
Preference number: 5 (lower is better)
Translates to: TRKASLQVPKVYGWNIFDIVVYF*QAMYLS
Trigger: TGAAAGATACATGGCTTGCAAAAAGTAAACCACGAT...ATCAAAAATATTCCATCCATATACTTTGGGGACTTGTAGGGATGCCTTTCTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp ACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATAACGGCAGATCTGCAAACCTaGTTAGTTCAATACAAACCA +
Preference number: 5 (lower is better)
Translates to: TLYHYKNSHKELNILSITADLQT*LVQYKP
Trigger: TGGTTTGTATTGAACTAACAAGGTTTGCAGATCTGC...CGTTATGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538183.7
ENST00000546260.5
CDS-3UTR CAA 90 bp GCAGTACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCAAACAGCAAAAACACTTaGGTTTTGTCGTATATCCCT +
Preference number: 5 (lower is better)
Translates to: AVLYTTTKTVIKSLTYSANSKNT*VLSYIP
Trigger: AGGGATATACGACAAAACCAAAGTGTTTTTGCTGTT...TGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGTACTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538183.7
CDS-3UTR CAA 90 bp ACTCTATACCACTACAAAAACAGTCATAAAGAGCTTAACATACTCAGCATAACGATCGTGGTTTACTTTTaGCAAGCCATGTATCTTTCA +
Preference number: 5 (lower is better)
Translates to: TLYHYKNSHKELNILSITIVVYF*QAMYLS
Trigger: TGAAAGATACATGGCTTGCAAAAAGTAAACCACGAT...CGTTATGCTGAGTATGTTAAGCTCTTTATGACTGTTTTTGTAGTGGTATAGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337404.8
ENST00000444946.6
ENST00000538183.7
ENST00000546260.5
CDS CCA 72 bp CCACGGAGAGGCCCGTCCGTATGGGGCCTGGCTCCCTaGGGTCGCCTCTGCCGGGGACTGCCTCCCGCCGCT +
Preference number: 6 (lower is better)
Translates to: PRRGPSVWGLAP*GRLCRGLPPAA
Trigger: AGCGGCGGGAGGCAGTCCCCGGCAGAGGCGACCCCAGGGAGCCAGGCCCCATACGGACGGGCCTCTCCGTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452684.2
ENST00000540491.1
ENST00000546260.5
CDS GCA 72 bp GGCCGGCGGGAGCCGCGCAGAGTCCGAGGCGCCTGCTaGTTCGGCAGGAGCGCCGAGGGCCGGACTTGTGTA +
Preference number: 6 (lower is better)
Translates to: GRREPRRVRGAC*FGRSAEGRTCV
Trigger: TACACAAGTCCGGCCCTCGGCGCTCCTGCCGAAGCAGCAGGCGCCTCGGACTCTGCGCGGCTCCCGCCGGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS GCA 72 bp AGTGGCCGGCGGGAGCCGCGCAGAGTCCGAGGCGCCTaGTGCTTCGGCAGGAGCGCCGAGGGCCGGACTTGT +
Preference number: 6 (lower is better)
Translates to: SGRREPRRVRGA*CFGRSAEGRTC
Trigger: ACAAGTCCGGCCCTCGGCGCTCCTGCCGAAGCAGCAGGCGCCTCGGACTCTGCGCGGCTCCCGCCGGCCACT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CCA 72 bp CCGGTCAGGCCAAGCCGCGAGGAGCCGCGGGATCCCTaGAACCCTGCGGCTCCCGCGTTCCCTGACCTGGTG +
Preference number: 6 (lower is better)
Translates to: PVRPSREEPRDP*NPAAPAFPDLV
Trigger: CACCAGGTCAGGGAACGCGGGAGCCGCAGGGTTCCAGGGATCCCGCGGCTCCTCGCGGCTTGGCCTGACCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CCA 72 bp GTCATCGTCTCGGCGGCGCGGACCATCATAGGTGAGTaGCCGGCGGGAGCCGCGCAGAGTCCGAGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: VIVSAARTIIGE*PAGAAQSPRRL
Trigger: CAGGCGCCTCGGACTCTGCGCGGCTCCCGCCGGCCACTCACCTATGATGGTCCGCGCCGCCGAGACGATGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CAA 90 bp CTCAGGTCCCGCCCGCGGCAGGCCTGTGGGCTGCGAGGAGGAGCTTaGCCTAGCTTGCAGGCAGCGCAGGGCAGACGGCGGCAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: LRSRPRQACGLRGGA*PSLQAAQGRRRQEK
Trigger: CTTCTCCTGCCGCCGTCTGCCCTGCGCTGCCTGCAAGCTAGGCAAAGCTCCTCCTCGCAGCCCACAGGCCTGCCGCGGGCGGGACCTGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS GCA 72 bp CCTGGAACCCTGCGGCTCCCGCGTTCCCTGACCTGGTaGTACAGCCCCACCCTCTCCTCTCCCGATGTGCGC +
Preference number: 6 (lower is better)
Translates to: PGTLRLPRSLTW*YSPTLSSPDVR
Trigger: GCGCACATCGGGAGAGGAGAGGGTGGGGCTGTAGCACCAGGTCAGGGAACGCGGGAGCCGCAGGGTTCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS GCA 72 bp CAGGCGCTCTGTAAATGCGTCCGAGGTCCGCGGTTCTaGCCGCAAGCCCAGACCCCGGCCTCACTTCCGCCC +
Preference number: 6 (lower is better)
Translates to: QALCKCVRGPRF*PQAQTPASLPP
Trigger: GGGCGGAAGTGAGGCCGGGGTCTGGGCTTGCGGGCAGAACCGCGGACCTCGGACGCATTTACAGAGCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CCA 72 bp TGGCGTAGGGAGGTGTTCTCCTCCGGGGCCCCTGATTaGCCGGCTCCGGGAGGCGCCATCGGTAATGCCTGC +
Preference number: 6 (lower is better)
Translates to: WRREVFSSGAPD*PAPGGAIGNAC
Trigger: GCAGGCATTACCGATGGCGCCTCCCGGAGCCGGCCAATCAGGGGCCCCGGAGGAGAACACCTCCCTACGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CCA 72 bp GCCGAGGGCCGGACTTGTGTAGGAGAGGGGCGTATGTaGAGGAAGCCGGTCAGGCCAAGCCGCGAGGAGCCG +
Preference number: 6 (lower is better)
Translates to: AEGRTCVGEGRM*RKPVRPSREEP
Trigger: CGGCTCCTCGCGGCTTGGCCTGACCGGCTTCCTCCACATACGCCCCTCTCCTACACAAGTCCGGCCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CAA 72 bp GTAAACGCCCGCGGCTCGCCGCCCACGGCCTCTCTCTaGAGGTGGCACCTGGTCCTCCGACACGCGGAAGCA +
Preference number: 6 (lower is better)
Translates to: VNARGSPPTASL*RWHLVLRHAEA
Trigger: TGCTTCCGCGTGTCGGAGGACCAGGTGCCACCTCAAGAGAGAGGCCGTGGGCGGCGAGCCGCGGGCGTTTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535561.5
CDS CAA 90 bp AGTCCGAGGCGCCTGCTGCTTCGGCAGGAGCGCCGAGGGCCGGACTaGTGTAGGAGAGGGGCGTATGTGGAGGAAGCCGGTCAGGCCAAG +
Preference number: 6 (lower is better)
Translates to: SPRRLLLRQERRGPD*CRRGAYVEEAGQAK
Trigger: CTTGGCCTGACCGGCTTCCTCCACATACGCCCCTCTCCTACACAAGTCCGGCCCTCGGCGCTCCTGCCGAAGCAGCAGGCGCCTCGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CAA 90 bp CGCCCGCGGCAGGCCTGTGGGCTGCGAGGAGGAGCTTTGCCTAGCTaGCAGGCAGCGCAGGGCAGACGGCGGCAGGAGAAGCAAGATGAA +
Preference number: 6 (lower is better)
Translates to: RPRQACGLRGGALPS*QAAQGRRRQEKQDE
Trigger: TTCATCTTGCTTCTCCTGCCGCCGTCTGCCCTGCGCTGCCTGCAAGCTAGGCAAAGCTCCTCCTCGCAGCCCACAGGCCTGCCGCGGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS GCA 72 bp AGGCCTGTGGGCTGCGAGGAGGAGCTTTGCCTAGCTTaGAGGCAGCGCAGGGCAGACGGCGGCAGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: RPVGCEEELCLA*RQRRADGGRRS
Trigger: GCTTCTCCTGCCGCCGTCTGCCCTGCGCTGCCTGCAAGCTAGGCAAAGCTCCTCCTCGCAGCCCACAGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CAA 72 bp CGCCTGCTGCTTCGGCAGGAGCGCCGAGGGCCGGACTaGTGTAGGAGAGGGGCGTATGTGGAGGAAGCCGGT +
Preference number: 6 (lower is better)
Translates to: RLLLRQERRGPD*CRRGAYVEEAG
Trigger: ACCGGCTTCCTCCACATACGCCCCTCTCCTACACAAGTCCGGCCCTCGGCGCTCCTGCCGAAGCAGCAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS TCA 72 bp AGCCGCCGAGAGCAAAAGGACCCATCAGAGCTGTGCTaGGACCCGCCGCGGGCCGGGCTCGCACTCGAGATT +
Preference number: 6 (lower is better)
Translates to: SRREQKDPSELC*DPPRAGLALEI
Trigger: AATCTCGAGTGCGAGCCCGGCCCGCGGCGGGTCTCAGCACAGCTCTGATGGGTCCTTTTGCTCTCGGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CCA 72 bp CTCCTCTCCCGATGTGCGCACTCCGTCCCTCGTGCTTaGATTGGCTCCCGGGGTAGAGCCATCGCGTGGCCT +
Preference number: 6 (lower is better)
Translates to: LLSRCAHSVPRA*IGSRGRAIAWP
Trigger: AGGCCACGCGATGGCTCTACCCCGGGAGCCAATCCAAGCACGAGGGACGGAGTGCGCACATCGGGAGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CAA 72 bp GGGACTGCCTCCCGCCGCTCAGCCTGGAACCTACCCTaGGCCAACGCCTCCTGGTACTTCTCCTCGGTGACG +
Preference number: 6 (lower is better)
Translates to: GTASRRSAWNLP*ANASWYFSSVT
Trigger: CGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAAGGGTAGGTTCCAGGCTGAGCGGCGGGAGGCAGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452684.2
ENST00000546260.5
CDS CAA 90 bp CCTCTGCCGGGGACTGCCTCCCGCCGCTCAGCCTGGAACCTACCCTaGGCCAACGCCTCCTGGTACTTCTCCTCGGTGACGTTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: PLPGTASRRSAWNLP*ANASWYFSSVTFRL
Trigger: CAACCTGAACGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAAGGGTAGGTTCCAGGCTGAGCGGCGGGAGGCAGTCCCCGGCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452684.2
ENST00000546260.5
CDS CAA 90 bp ACCCTCTCCTCTCCCGATGTGCGCACTCCGTCCCTCGTGCTTGGATaGGCTCCCGGGGTAGAGCCATCGCGTGGCCTGCCTCTCCCATTG +
Preference number: 6 (lower is better)
Translates to: TLSSPDVRTPSLVLG*APGVEPSRGLPLPL
Trigger: CAATGGGAGAGGCAGGCCACGCGATGGCTCTACCCCGGGAGCCAATCCAAGCACGAGGGACGGAGTGCGCACATCGGGAGAGGAGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS TCA 72 bp CTAGTGCTGGTGCTACCGCTGATGCCGCCGATCTGCTaGAGCCGCTGCCGAAGCCACCACAGCCACGAGTGC +
Preference number: 6 (lower is better)
Translates to: LVLVLPLMPPIC*SRCRSHHSHEC
Trigger: GCACTCGTGGCTGTGGTGGCTTCGGCAGCGGCTTCAGCAGATCGGCGGCATCAGCGGTAGCACCAGCACTAG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337404.8
ENST00000452684.2
CDS GCA 72 bp TGCCTGGAGCCCAGATACCCCAAAACCGGAGCCAGCTaGCTGCTGGTGCCGCACACTGCCCGGCTCAACATG +
Preference number: 6 (lower is better)
Translates to: CLEPRYPKTGAS*LLVPHTARLNM
Trigger: CATGTTGAGCCGGGCAGTGTGCGGCACCAGCAGGCAGCTGGCTCCGGTTTTGGGGTATCTGGGCTCCAGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337404.8
ENST00000367054.6
ENST00000367055.8
ENST00000444946.6
ENST00000452684.2
ENST00000538183.7
ENST00000546260.5
CDS CCA 72 bp GGTAGAGCCATCGCGTGGCCTGCCTCTCCCATTGGTTaGCGTAGGGAGGTGTTCTCCTCCGGGGCCCCTGAT +
Preference number: 6 (lower is better)
Translates to: GRAIAWPASPIG*RREVFSSGAPD
Trigger: ATCAGGGGCCCCGGAGGAGAACACCTCCCTACGCCAACCAATGGGAGAGGCAGGCCACGCGATGGCTCTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CCA 72 bp CGTGCTTGGATTGGCTCCCGGGGTAGAGCCATCGCGTaGCCTGCCTCTCCCATTGGTTGGCGTAGGGAGGTG +
Preference number: 6 (lower is better)
Translates to: RAWIGSRGRAIA*PASPIGWRREV
Trigger: CACCTCCCTACGCCAACCAATGGGAGAGGCAGGCCACGCGATGGCTCTACCCCGGGAGCCAATCCAAGCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CAA 72 bp GACGCTCCCGGCGTCCTCACCCGTTCACAGCCAGAGTaGATCTTAGAAGGCAGGGGGCTCGCACCGAGACGC +
Preference number: 6 (lower is better)
Translates to: DAPGVLTRSQPE*ILEGRGLAPRR
Trigger: GCGTCTCGGTGCGAGCCCCCTGCCTTCTAAGATCAACTCTGGCTGTGAACGGGTGAGGACGCCGGGAGCGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS GCA 72 bp GCGCAGGGCAGACGGCGGCAGGAGAAGCAAGATGAATaGAGGCTCAGATCCTGTGGTCATCGTCTCGGCGGC +
Preference number: 6 (lower is better)
Translates to: AQGRRRQEKQDE*RLRSCGHRLGG
Trigger: GCCGCCGAGACGATGACCACAGGATCTGAGCCTGCATTCATCTTGCTTCTCCTGCCGCCGTCTGCCCTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS CCA 72 bp GACGCTCCTAGCAAGCCCCTCACGCGAGCGAATGACTaGCGCCAGGAGAAACGCATAGGACCTCCCGAAGCC +
Preference number: 6 (lower is better)
Translates to: DAPSKPLTRAND*RQEKRIGPPEA
Trigger: GGCTTCGGGAGGTCCTATGCGTTTCTCCTGGCGCCAGTCATTCGCTCGCGTGAGGGGCTTGCTAGGAGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS TCA 72 bp CCCCCTTGGCCAACGCCTCCTGGTACTTCTCCTCGGTaGCGTTCAGGTTGTTCACGTAGGCCGCGTGGTGCT +
Preference number: 6 (lower is better)
Translates to: PPWPTPPGTSPR*RSGCSRRPRGA
Trigger: AGCACCACGCGGCCTACGTGAACAACCTGAACGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000367054.6
ENST00000401980.3
CDS TCA 72 bp CTCCCTTGGCCAACGCCTCCTGGTACTTCTCCTCGGTaGCGTTCAGGTTGTTCACGTAGGCCGCGTGGTGCT +
Preference number: 6 (lower is better)
Translates to: LPWPTPPGTSPR*RSGCSRRPRGA
Trigger: AGCACCACGCGGCCTACGTGAACAACCTGAACGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367055.8
ENST00000444946.6
ENST00000535561.5
ENST00000537657.5
ENST00000538183.7
ENST00000545162.5
ENST00000546087.5
CDS GCA 72 bp TGTCCAGAAACACTGGGGTTTCAGGCGCTCTGTAAATaGGTCCGAGGTCCGCGGTTCTGCCCGCAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: CPETLGFQALCK*VRGPRFCPQAQ
Trigger: CTGGGCTTGCGGGCAGAACCGCGGACCTCGGACGCATTTACAGAGCGCCTGAAACCCCAGTGTTTCTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS TCA 72 bp TACCCTTGGCCAACGCCTCCTGGTACTTCTCCTCGGTaGCGTTCAGGTTGTTCACGTAGGCCGCGTGGTGCT +
Preference number: 6 (lower is better)
Translates to: YPWPTPPGTSPR*RSGCSRRPRGA
Trigger: AGCACCACGCGGCCTACGTGAACAACCTGAACGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAAGGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452684.2
ENST00000546260.5
CDS CCA 72 bp CGCTCAGCCTGGAACCTACCCTTGGCCAACGCCTCCTaGTACTTCTCCTCGGTGACGTTCAGGTTGTTCACG +
Preference number: 6 (lower is better)
Translates to: RSAWNLPLANAS*YFSSVTFRLFT
Trigger: CGTGAACAACCTGAACGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAAGGGTAGGTTCCAGGCTGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452684.2
ENST00000546260.5
CDS CCA 72 bp ATGGCTTCCAGCAACTCCCCCTTGGCCAACGCCTCCTaGTACTTCTCCTCGGTGACGTTCAGGTTGTTCACG +
Preference number: 6 (lower is better)
Translates to: MASSNSPLANAS*YFSSVTFRLFT
Trigger: CGTGAACAACCTGAACGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAAGGGGGAGTTGCTGGAAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000367054.6
ENST00000401980.3
CDS CCA 72 bp GTCGGGGAACTCCAACATTGGGGTGTCCAGAAACACTaGGGTTTCAGGCGCTCTGTAAATGCGTCCGAGGTC +
Preference number: 6 (lower is better)
Translates to: VGELQHWGVQKH*GFRRSVNASEV
Trigger: GACCTCGGACGCATTTACAGAGCGCCTGAAACCCCAGTGTTTCTGGACACCCCAATGTTGGAGTTCCCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS TCA 72 bp GGCAAGCTCCTTCGCAGGACCCCAAGTTCCCTGAGATaGCAGAAGTGTGTTCAAACCCATCGAGGCACTCCT +
Preference number: 6 (lower is better)
Translates to: GKLLRRTPSSLR*QKCVQTHRGTP
Trigger: AGGAGTGCCTCGATGGGTTTGAACACACTTCTGTCATCTCAGGGAACTTGGGGTCCTGCGAAGGAGCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452684.2
ENST00000540491.1
CDS TCA 72 bp TGGGCTGTAACATCTCCTGAAGTCAAGTGGGCTCAGTaGAGTTTCACCTGCAGGGTAGCTGGGGATGCAGGG +
Preference number: 6 (lower is better)
Translates to: WAVTSPEVKWAQ*SFTCRVAGDAG
Trigger: CCCTGCATCCCCAGCTACCCTGCAGGTGAAACTTCACTGAGCCCACTTGACTTCAGGAGATGTTACAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541573.5
CDS CCA 72 bp ATCTGGGCTGTAACATCTCCCTTGGCCAACGCCTCCTaGTACTTCTCCTCGGTGACGTTCAGGTTGTTCACG +
Preference number: 6 (lower is better)
Translates to: IWAVTSPLANAS*YFSSVTFRLFT
Trigger: CGTGAACAACCTGAACGTCACCGAGGAGAAGTACCAGGAGGCGTTGGCCAAGGGAGATGTTACAGCCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367055.8
ENST00000444946.6
ENST00000535561.5
ENST00000537657.5
ENST00000538183.7
ENST00000545162.5
ENST00000546087.5
CDS CAA 72 bp TTCTCCTTAAACTTGTCAAAGGAACCAAAGTCACGTTaGATGGCTTCCAGCAACTCCCCCTTGGCCAACGCC +
Preference number: 6 (lower is better)
Translates to: FSLNLSKEPKSR*MASSNSPLANA
Trigger: GGCGTTGGCCAAGGGGGAGTTGCTGGAAGCCATCAAACGTGACTTTGGTTCCTTTGACAAGTTTAAGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337404.8
ENST00000367054.6
ENST00000401980.3
CDS TCA 72 bp CCAGGTCCGTCAACAGTTTTCCCCTTCATGACTTTGTaGCAAAGCTTTCTTGTTCCACTATCCAGGTGTTCC +
Preference number: 6 (lower is better)
Translates to: PGPSTVFPFMTL*QSFLVPLSRCS
Trigger: GGAACACCTGGATAGTGGAACAAGAAAGCTTTGTCACAAAGTCATGAAGGGGAAAACTGTTGACGGACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546087.5
CDS TCA 72 bp GCTTGCCTGGAAACCCTAGAAAGCTCAGAAAAATTATaGACTTTGCCCAGTAAGAGGCTGGGAAGTCAGAAA +
Preference number: 6 (lower is better)
Translates to: ACLETLESSEKL*TLPSKRLGSQK
Trigger: TTTCTGACTTCCCAGCCTCTTACTGGGCAAAGTTCATAATTTTTCTGAGCTTTCTAGGGTTTCCAGGCAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546087.5