RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SOCS7 (Homo sapiens)

Ensembl gene IDs: ENSG00000274211, ENSG00000274229

Ensembl transcript IDs: ENST00000612932.6, ENST00000613678.5, ENST00000615473.2, ENST00000617360.1, ENST00000617765.1, ENST00000631449.1, ENST00000631692.1, ENST00000632687.1, ENST00000665913.1

Found 1060 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTCTGCCTCCCTCACATGGCCTGAGCTGACCATAGTGAGGCCCTaGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGCTTTGGGCTC +
Preference number: 1 (lower is better)
Translates to: GSASLTWPELTIVRP*QWAGALLTPLGFGL
Trigger: GAGCCCAAAGCCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTCAGGCCATGTGAGGGAGGCAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 90 bp CACTCCACAGAGAAAGGACTAGGCTGCGGCCAGGGCTGGGACCAGTaGACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAG +
Preference number: 1 (lower is better)
Translates to: HSTEKGLGCGQGWDQ*TDTDTVQHDTPQEE
Trigger: CTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTCCCAGCCCTGGCCGCAGCCTAGTCCTTTCTCTGTGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 90 bp AGTCCAGCTGCAACCAAACATGCATGTCTTCCCGCCGTGGCTGGCTaGTTTCTGTCTGCCCCTCCAGGCCTCTTGGTGTTGCAGAGGAGG +
Preference number: 1 (lower is better)
Translates to: SPAATKHACLPAVAG*FLSAPPGLLVLQRR
Trigger: CCTCCTCTGCAACACCAAGAGGCCTGGAGGGGCAGACAGAAAGCAGCCAGCCACGGCGGGAAGACATGCATGTTTGGTTGCAGCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp AGGCCCACAGCACAGACTCTAACTCTGCCTTTGGCACCAGCTGAATaGCCGTCCCCTGTTCCCTCCTCCCACCCCTTCTTTGGACCTGCT +
Preference number: 1 (lower is better)
Translates to: RPTAQTLTLPLAPAE*PSPVPSSHPFFGPA
Trigger: AGCAGGTCCAAAGAAGGGGTGGGAGGAGGGAACAGGGGACGGCCATTCAGCTGGTGCCAAAGGCAGAGTTAGAGTCTGTGCTGTGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp CAGGTCACAAACTCAGCATGCAGGGCTGGCTTCCCGGGAGGTAGATaGGAGTGGGACGGGATAGCAGGTGTGGAGAGGACAGGAAGGGAA +
Preference number: 1 (lower is better)
Translates to: QVTNSACRAGFPGGR*EWDGIAGVERTGRE
Trigger: TTCCCTTCCTGTCCTCTCCACACCTGCTATCCCGTCCCACTCCCATCTACCTCCCGGGAAGCCAGCCCTGCATGCTGAGTTTGTGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp TCGCAGTCCAGCTGCAACCAAACATGCATGTCTTCCCGCCGTGGCTaGCTGCTTTCTGTCTGCCCCTCCAGGCCTCTTGGTGTTGCAGAG +
Preference number: 1 (lower is better)
Translates to: SQSSCNQTCMSSRRG*LLSVCPSRPLGVAE
Trigger: CTCTGCAACACCAAGAGGCCTGGAGGGGCAGACAGAAAGCAGCCAGCCACGGCGGGAAGACATGCATGTTTGGTTGCAGCTGGACTGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp ACGATCGCAGTCCAGCTGCAACCAAACATGCATGTCTTCCCGCCGTaGCTGGCTGCTTTCTGTCTGCCCCTCCAGGCCTCTTGGTGTTGC +
Preference number: 1 (lower is better)
Translates to: TIAVQLQPNMHVFPP*LAAFCLPLQASWCC
Trigger: GCAACACCAAGAGGCCTGGAGGGGCAGACAGAAAGCAGCCAGCCACGGCGGGAAGACATGCATGTTTGGTTGCAGCTGGACTGCGATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 90 bp GCCTCCCCCTCATCTTCCCCTAACTGCTCTGTGCAAGGCCACCCATaGAGGCACCAAACACCCACACCTGACGAAGACTGTCTCCTCTTG +
Preference number: 1 (lower is better)
Translates to: ASPSSSPNCSVQGHP*RHQTPTPDEDCLLL
Trigger: CAAGAGGAGACAGTCTTCGTCAGGTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAGATGAGGGGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp TTTGCAGCCCACTCCACAGAGAAAGGACTAGGCTGCGGCCAGGGCTaGGACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCC +
Preference number: 1 (lower is better)
Translates to: FAAHSTEKGLGCGQG*DQCTDTDTVQHDTP
Trigger: GGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTCCCAGCCCTGGCCGCAGCCTAGTCCTTTCTCTGTGGAGTGGGCTGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp GCACCAGTGTGGGCATTCCAACAGCCAGCTACCCAAAGTGGCACCTaGACCCTACCTGTCCCTTGGACAGGTTCTGGGCCTAAGAGTGAG +
Preference number: 1 (lower is better)
Translates to: APVWAFQQPATQSGT*TLPVPWTGSGPKSE
Trigger: CTCACTCTTAGGCCCAGAACCTGTCCAAGGGACAGGTAGGGTCCAGGTGCCACTTTGGGTAGCTGGCTGTTGGAATGCCCACACTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 90 bp TTGCGCTGCTGTTTTGCAGCCCACTCCACAGAGAAAGGACTAGGCTaGGGCCAGGGCTGGGACCAGTGCACTGACACAGACACAGTTCAA +
Preference number: 1 (lower is better)
Translates to: LRCCFAAHSTEKGLG*GQGWDQCTDTDTVQ
Trigger: TTGAACTGTGTCTGTGTCAGTGCACTGGTCCCAGCCCTGGCCGCAGCCTAGTCCTTTCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 90 bp AGGCACCAAACACCCACACCTGACGAAGACTGTCTCCTCTTGCGCTaGTGTTTTGCAGCCCACTCCACAGAGAAAGGACTAGGCTGCGGC +
Preference number: 1 (lower is better)
Translates to: RHQTPTPDEDCLLLR*CFAAHSTEKGLGCG
Trigger: GCCGCAGCCTAGTCCTTTCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAAGAGGAGACAGTCTTCGTCAGGTGTGGGTGTTTGGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 90 bp TATCTCCAGGAGGAACTACGATCGCAGTCCAGCTGCAACCAAACATaGATGTCTTCCCGCCGTGGCTGGCTGCTTTCTGTCTGCCCCTCC +
Preference number: 1 (lower is better)
Translates to: YLQEELRSQSSCNQT*MSSRRGWLLSVCPS
Trigger: GGAGGGGCAGACAGAAAGCAGCCAGCCACGGCGGGAAGACATGCATGTTTGGTTGCAGCTGGACTGCGATCGTAGTTCCTCCTGGAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp CACGCAGAGTACGGTCATGTGCTTCTTCCAAGCCCCAGGGCTGCGTaGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTC +
Preference number: 1 (lower is better)
Translates to: HAEYGHVLLPSPRAA*GTKVSAQRIPTFLF
Trigger: GAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCCCTGGGGCTTGGAAGAAGCACATGACCGTACTCTGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp TCCTTTGGCCACACCTTTCTCCTCAGGGAGGTGGCGCCACCTCCATaGCTCAGGTTCCAAGATGTAACATTCACTTGGCCTAGGCACAGG +
Preference number: 1 (lower is better)
Translates to: SFGHTFLLREVAPPP*LRFQDVTFTWPRHR
Trigger: CCTGTGCCTAGGCCAAGTGAATGTTACATCTTGGAACCTGAGCCATGGAGGTGGCGCCACCTCCCTGAGGAGAAAGGTGTGGCCAAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp AACCAAAAACGTACAGCAGTGGCTATGCCACAGGCAGCACCAGTGTaGGCATTCCAACAGCCAGCTACCCAAAGTGGCACCTGGACCCTA +
Preference number: 1 (lower is better)
Translates to: NQKRTAVAMPQAAPV*AFQQPATQSGTWTL
Trigger: TAGGGTCCAGGTGCCACTTTGGGTAGCTGGCTGTTGGAATGCCCACACTGGTGCTGCCTGTGGCATAGCCACTGCTGTACGTTTTTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 90 bp CTGGTCACTCCACGTGGGACTAAGGAAGAAGGCAATGCTCCCAGATaGGGCAGTCCTATAAATTACCAGGACACTGGGGCCCCACCCAAA +
Preference number: 1 (lower is better)
Translates to: LVTPRGTKEEGNAPR*GSPINYQDTGAPPK
Trigger: TTTGGGTGGGGCCCCAGTGTCCTGGTAATTTATAGGACTGCCTCATCTGGGAGCATTGCCTTCTTCCTTAGTCCCACGTGGAGTGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 90 bp ACCTGGAAACATGCTCCATTAAATTCAGCAGCCCATGACTGGCTCTaGACCGCCCAGGTGATGGGAAACACGATTGCCATGACAGCTGGC +
Preference number: 1 (lower is better)
Translates to: TWKHAPLNSAAHDWL*TAQVMGNTIAMTAG
Trigger: GCCAGCTGTCATGGCAATCGTGTTTCCCATCACCTGGGCGGTTCAGAGCCAGTCATGGGCTGCTGAATTTAATGGAGCATGTTTCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 90 bp TTTGCCCAATATTCTTTTCGAGACCACCCACCCTCCTTTCTCTCCTaGTCCTACAACAGCTGCCCATGGCAACAAGAGGCAGATTCCCCC +
Preference number: 1 (lower is better)
Translates to: FAQYSFRDHPPSFLS*SYNSCPWQQEADSP
Trigger: GGGGGAATCTGCCTCTTGTTGCCATGGGCAGCTGTTGTAGGAGCAGGAGAGAAAGGAGGGTGGGTGGTCTCGAAAAGAATATTGGGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp GGACAGGCAGCTCTCAAATCGGCATCTGGCAGACTTTCCAGTGAGTaGAGACCAGCAGGATCTGATCCGGAAATGTCTGGGTTGCTAGAA +
Preference number: 1 (lower is better)
Translates to: GQAALKSASGRLSSE*RPAGSDPEMSGLLE
Trigger: TTCTAGCAACCCAGACATTTCCGGATCAGATCCTGCTGGTCTCCACTCACTGGAAAGTCTGCCAGATGCCGATTTGAGAGCTGCCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 90 bp ACCTCCCATCCCAGAAGTGGGATGGCAGTGATAAACCTAAAAACGTaGGATGCGATGCTCTCCTCTGACCTAAGGAAATCCCGTGAGGGC +
Preference number: 1 (lower is better)
Translates to: TSHPRSGMAVINLKT*DAMLSSDLRKSREG
Trigger: GCCCTCACGGGATTTCCTTAGGTCAGAGGAGAGCATCGCATCTCACGTTTTTAGGTTTATCACTGCCATCCCACTTCTGGGATGGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 90 bp AACGGTTCCAGGTCACCTCTAAACCCTCTAGAAATGAAATGGGAATaGAGCAGGTCACAAACTCAGCATGCAGGGCTGGCTTCCCGGGAG +
Preference number: 1 (lower is better)
Translates to: NGSRSPLNPLEMKWE*SRSQTQHAGLASRE
Trigger: CTCCCGGGAAGCCAGCCCTGCATGCTGAGTTTGTGACCTGCTTCATTCCCATTTCATTTCTAGAGGGTTTAGAGGTGACCTGGAACCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp GACAAATCAGAGGTGGGCTGTGTTTATGGTGCACAGCTCATCTTGTaGGCCACCCTTCCACAGTCAGGTAATGGTGCAAGTTTCCTCCCT +
Preference number: 1 (lower is better)
Translates to: DKSEVGCVYGAQLIL*ATLPQSGNGASFLP
Trigger: AGGGAGGAAACTTGCACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAACACAGCCCACCTCTGATTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 90 bp GCCATGAAGAACCTGGAAACATGCTCCATTAAATTCAGCAGCCCATaGCTGGCTCTGAACCGCCCAGGTGATGGGAAACACGATTGCCAT +
Preference number: 1 (lower is better)
Translates to: AMKNLETCSIKFSSP*LALNRPGDGKHDCH
Trigger: ATGGCAATCGTGTTTCCCATCACCTGGGCGGTTCAGAGCCAGTCATGGGCTGCTGAATTTAATGGAGCATGTTTCCAGGTTCTTCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 90 bp GCAGAAACCATTAAAGACCATTGGAGTTTTTCTCCCCGCTCCTCCTaGAAGCAGGGACAGGCAGCTCTCAAATCGGCATCTGGCAGACTT +
Preference number: 1 (lower is better)
Translates to: AETIKDHWSFSPRSS*KQGQAALKSASGRL
Trigger: AAGTCTGCCAGATGCCGATTTGAGAGCTGCCTGTCCCTGCTTTCAGGAGGAGCGGGGAGAAAAACTCCAATGGTCTTTAATGGTTTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 90 bp ATCAAGGCCTCCAATCATTTTGTGCTGAGTGTGAAGGCTCCAATGTaGAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTG +
Preference number: 1 (lower is better)
Translates to: IKASNHFVLSVKAPM*KQGLPQGRADLTFV
Trigger: CACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCACATTGGAGCCTTCACACTCAGCACAAAATGATTGGAGGCCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 90 bp TGGAGACCAGCAGGATCTGATCCGGAAATGTCTGGGTTGCTAGAATaGACACAAGAAAATACAGAAGCCCTTGCTACCTCCCATCCCAGA +
Preference number: 1 (lower is better)
Translates to: WRPAGSDPEMSGLLE*TQENTEALATSHPR
Trigger: TCTGGGATGGGAGGTAGCAAGGGCTTCTGTATTTTCTTGTGTTCATTCTAGCAACCCAGACATTTCCGGATCAGATCCTGCTGGTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 90 bp ACTTCTGCAAATGAGGACACACACACACACACACATGCATGCATATaGACACACACAGACTCAGACCTCCTTCCAGCAGCCATAGAGCTT +
Preference number: 1 (lower is better)
Translates to: TSANEDTHTHTHACI*THTDSDLLPAAIEL
Trigger: AAGCTCTATGGCTGCTGGAAGGAGGTCTGAGTCTGTGTGTGTGCATATGCATGCATGTGTGTGTGTGTGTGTGTCCTCATTTGCAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 90 bp AGCAAGACTTCTGCAAATGAGGACACACACACACACACACATGCATaGATATGCACACACACAGACTCAGACCTCCTTCCAGCAGCCATA +
Preference number: 1 (lower is better)
Translates to: SKTSANEDTHTHTHA*ICTHTDSDLLPAAI
Trigger: TATGGCTGCTGGAAGGAGGTCTGAGTCTGTGTGTGTGCATATGCATGCATGTGTGTGTGTGTGTGTGTCCTCATTTGCAGAAGTCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 90 bp CCAAACCATCAGGAAGCCACAAACCTGACATTAGTATCTGTCTTGTaGCACGAGGCAACTATAAGCATGGGGAACCCAGAAAGAGAGTCC +
Preference number: 1 (lower is better)
Translates to: PNHQEATNLTLVSVL*HEATISMGNPERES
Trigger: GGACTCTCTTTCTGGGTTCCCCATGCTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCCTGATGGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 90 bp TTGCTTTTGCTCATGTGTTTTTCATCTCACTGTCTGTCCTGCCATTaGCTACAACCCAAAGCCTCAGAGGCACAGAACTTTCCCAGACCA +
Preference number: 1 (lower is better)
Translates to: LLLLMCFSSHCLSCH*LQPKASEAQNFPRP
Trigger: TGGTCTGGGAAAGTTCTGTGCCTCTGAGGCTTTGGGTTGTAGTCAATGGCAGGACAGACAGTGAGATGAAAAACACATGAGCAAAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 90 bp CTCAACAGATTCCAACTTCAGGCTCTATATTGGGGTGGCACTTCCTaGAAGATGGCGAGTTATATTACTTGTACTCTCACGAGGCAACAC +
Preference number: 1 (lower is better)
Translates to: LNRFQLQALYWGGTS*KMASYITCTLTRQH
Trigger: GTGTTGCCTCGTGAGAGTACAAGTAATATAACTCGCCATCTTGCAGGAAGTGCCACCCCAATATAGAGCCTGAAGTTGGAATCTGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp TGTTACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATaGGTTGAGAGCAGAGGAAGAACGGGGTTAACTTCAGGTCATGGA +
Preference number: 1 (lower is better)
Translates to: CYHDQSDMYSYLKGQ*VESRGRTGLTSGHG
Trigger: TCCATGACCTGAAGTTAACCCCGTTCTTCCTCTGCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp AACACAAGAAAATACAGAAGCCCTTGCTACCTCCCATCCCAGAAGTaGGATGGCAGTGATAAACCTAAAAACGTGAGATGCGATGCTCTC +
Preference number: 1 (lower is better)
Translates to: NTRKYRSPCYLPSQK*DGSDKPKNVRCDAL
Trigger: GAGAGCATCGCATCTCACGTTTTTAGGTTTATCACTGCCATCCCACTTCTGGGATGGGAGGTAGCAAGGGCTTCTGTATTTTCTTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp GATTCCAACTTCAGGCTCTATATTGGGGTGGCACTTCCTGCAAGATaGCGAGTTATATTACTTGTACTCTCACGAGGCAACACTCACATG +
Preference number: 1 (lower is better)
Translates to: DSNFRLYIGVALPAR*RVILLVLSRGNTHM
Trigger: CATGTGAGTGTTGCCTCGTGAGAGTACAAGTAATATAACTCGCCATCTTGCAGGAAGTGCCACCCCAATATAGAGCCTGAAGTTGGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp CAGCCACCCAAGGATCTCAACAGATTCCAACTTCAGGCTCTATATTaGGGTGGCACTTCCTGCAAGATGGCGAGTTATATTACTTGTACT +
Preference number: 1 (lower is better)
Translates to: QPPKDLNRFQLQALY*GGTSCKMASYITCT
Trigger: AGTACAAGTAATATAACTCGCCATCTTGCAGGAAGTGCCACCCCAATATAGAGCCTGAAGTTGGAATCTGTTGAGATCCTTGGGTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp ACCCAAGGATCTCAACAGATTCCAACTTCAGGCTCTATATTGGGGTaGCACTTCCTGCAAGATGGCGAGTTATATTACTTGTACTCTCAC +
Preference number: 1 (lower is better)
Translates to: TQGSQQIPTSGSILG*HFLQDGELYYLYSH
Trigger: GTGAGAGTACAAGTAATATAACTCGCCATCTTGCAGGAAGTGCCACCCCAATATAGAGCCTGAAGTTGGAATCTGTTGAGATCCTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 90 bp AATGTCTGGGTTGCTAGAATGAACACAAGAAAATACAGAAGCCCTTaGTACCTCCCATCCCAGAAGTGGGATGGCAGTGATAAACCTAAA +
Preference number: 1 (lower is better)
Translates to: NVWVARMNTRKYRSP*YLPSQKWDGSDKPK
Trigger: TTTAGGTTTATCACTGCCATCCCACTTCTGGGATGGGAGGTAGCAAGGGCTTCTGTATTTTCTTGTGTTCATTCTAGCAACCCAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 90 bp AACCATGTTGCTCTAACAGGGCTGTGCACTGTTCAGTACATGCCATaGAGATTTCTGCTTCCTTGCTTTTGCTCATGTGTTTTTCATCTC +
Preference number: 1 (lower is better)
Translates to: NHVALTGLCTVQYMP*RFLLPCFCSCVFHL
Trigger: GAGATGAAAAACACATGAGCAAAAGCAAGGAAGCAGAAATCTGCATGGCATGTACTGAACAGTGCACAGCCCTGTTAGAGCAACATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 90 bp TCACAAGCTGACAGGCACATGGAAGTAACACTCACTCCTAAGTCATaGGTACAGTTTGCCATGAAGAACCTGGAAACATGCTCCATTAAA +
Preference number: 1 (lower is better)
Translates to: SQADRHMEVTLTPKS*VQFAMKNLETCSIK
Trigger: TTTAATGGAGCATGTTTCCAGGTTCTTCATGGCAAACTGTACTCATGACTTAGGAGTGAGTGTTACTTCCATGTGCCTGTCAGCTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 90 bp CTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACTaGCTTCAAGGTGAGTTTTCCATACCAAGTAATATAAATATCAAA +
Preference number: 1 (lower is better)
Translates to: LTLRTTFNPTGTNPN*LQGEFSIPSNINIK
Trigger: TTTGATATTTATATTACTTGGTATGGAAAACTCACCTTGAAGGCAGTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 90 bp CAGGACCTGCAGCAGCTACTAACGTCCCTTTACGAGAGTCAAACATaGCTATTAATACAGTATATACAGACACCCCATTCTGGAACTAAT +
Preference number: 1 (lower is better)
Translates to: QDLQQLLTSLYESQT*LLIQYIQTPHSGTN
Trigger: ATTAGTTCCAGAATGGGGTGTCTGTATATACTGTATTAATAGGCATGTTTGACTCTCGTAAAGGGACGTTAGTAGCTGCTGCAGGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 90 bp ACTGAGGCCACTGATATCACCCACCCACAACTTAGGAATCAACAGTaGGTCCCTAGATGTAAGCCTTTTCCAATTTGTGACTTGAAAATA +
Preference number: 1 (lower is better)
Translates to: TEATDITHPQLRNQQ*VPRCKPFPICDLKI
Trigger: TATTTTCAAGTCACAAATTGGAAAAGGCTTACATCTAGGGACCCACTGTTGATTCCTAAGTTGTGGGTGGGTGATATCAGTGGCCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 90 bp CTACATGTATGCAATAGCACAAATTCAGTGGAAGAACAGCTGTGTTaGCGATTAGAGATAAAAATCACTTATCCATTCCCTCCTTTCCCA +
Preference number: 1 (lower is better)
Translates to: LHVCNSTNSVEEQLC*RLEIKITYPFPPFP
Trigger: TGGGAAAGGAGGGAATGGATAAGTGATTTTTATCTCTAATCGTCAACACAGCTGTTCTTCCACTGAATTTGTGCTATTGCATACATGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CAA 90 bp CAGGTGACCAGGCAAAGGTCAGCACCAATGGTCCCAAAGAGCCGGTaGCCACCCACTTACCTAGTGCCCACACCAAAACCCCCGCCCGCC +
Preference number: 2 (lower is better)
Translates to: QVTRQRSAPMVPKSR*PPTYLVPTPKPPPA
Trigger: GGCGGGCGGGGGTTTTGGTGTGGGCACTAGGTAAGTGGGTGGCAACCGGCTCTTTGGGACCATTGGTGCTGACCTTTGCCTGGTCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGCCTCCAGTCCTAAGATaGCCAGGGGTGGGTGTGAGG +
Preference number: 2 (lower is better)
Translates to: ADHSEALAMGRSLADSFGPPVLR*PGVGVR
Trigger: CCTCACACCCACCCCTGGGCATCTTAGGACTGGAGG...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGAGCCCCAGGGCTGCGTaGGGAACCAAAGTCTCTGCA +
Preference number: 2 (lower is better)
Translates to: ADHSEALAMGRSLADSFGSPRAA*GTKVSA
Trigger: TGCAGAGACTTTGGTTCCCCACGCAGCCCTGGGGCT...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAGGGGTGGGTGTGAGGTaGAGCCCCACGCAGAGTACG +
Preference number: 2 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRGVGVR*SPTQST
Trigger: CGTACTCTGCGTGGGGCTCCACCTCACACCCACCCC...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGACCCCTCCAGGCCTCTTaGTGTTGCAGAGGAGGGGGT +
Preference number: 2 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRPLQAS*CCRGGG
Trigger: ACCCCCTCCTCTGCAACACCAAGAGGCCTGGAGGGG...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGAAATTCAGCAGCCCATaGCTGGCTCTGAACCGCCCA +
Preference number: 2 (lower is better)
Translates to: ADHSEALAMGRSLADSFGKFSSP*LALNRP
Trigger: TGGGCGGTTCAGAGCCAGTCATGGGCTGCTGAATTT...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGATCCAAGCCCCAGGGCTaGGTGGGGAACCAAAGTCTC +
Preference number: 2 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRSKPQG*VGNQSL
Trigger: GAGACTTTGGTTCCCCACGCAGCCCTGGGGCTTGGA...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGACCTAAGGAAATCCCGTaGGGGCTGCGTTCTGAGAGC +
Preference number: 2 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRPKEIP*GLRSES
Trigger: GCTCTCAGAACGCAGCCCTCACGGGATTTCCTTAGG...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGCACGCAAAGGAGTCATaGAGACCCAACAGCTCCACT +
Preference number: 2 (lower is better)
Translates to: ADHSEALAMGRSLADSFGHAKES*RPNSST
Trigger: AGTGGAGCTGTTGGGTCTTCATGACTCCTTTGCGTG...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGGCAGGAGCCTTGCTaGCTCCTTTGGGCTTTGGGC +
Preference number: 2 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKGQEPC*LLWALG
Trigger: GCCCAAAGCCCAAAGGAGTCAGCAAGGCTCCTGCCC...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACCAGAGTACGGTCATGTaGTTCTTCCAAGCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: LPLTALCKATHAGTKHPHQSTVM*FFQAPG
Trigger: CCCTGGGGCTTGGAAGAAGCACATGACCGTACTCTG...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACTCTGCCTCCCTCACATaGCCTGAGCTGACCATAGTG +
Preference number: 2 (lower is better)
Translates to: LPLTALCKATHAGTKHPHSASLT*PELTIV
Trigger: CACTATGGTCAGCTCAGGCCATGTGAGGGAGGCAGA...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CAA 90 bp CCATGCAGGCACCAAACACCCACACCTGACGAAGACTGTCTCCTCTaGCGCTGCTGTTTTGCAGCCCACTCCACAGAGAAAGGACTAGGC +
Preference number: 2 (lower is better)
Translates to: PCRHQTPTPDEDCLL*RCCFAAHSTEKGLG
Trigger: GCCTAGTCCTTTCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAAGAGGAGACAGTCTTCGTCAGGTGTGGGTGTTTGGTGCCTGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGGCCCATGACTGGCTCTaGACCGCCCAGGTGATGGGA +
Preference number: 2 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVAHDWL*TAQVMG
Trigger: TCCCATCACCTGGGCGGTTCAGAGCCAGTCATGGGC...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGTTCCCCCTCACAAGCTaGCAGGCACATGGAAGTAAC +
Preference number: 2 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLFPLTS*QAHGSN
Trigger: GTTACTTCCATGTGCCTGTCAGCTTGTGAGGGGGAA...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACGAGACCAGCAGGATCTaGTCCGGAAATGTCTGGGTT +
Preference number: 2 (lower is better)
Translates to: LPLTALCKATHAGTKHPHETSRI*SGNVWV
Trigger: AACCCAGACATTTCCGGATCAGATCCTGCTGGTCTC...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCTAGGCACAGGCAGGTaGCCAGGCAAAGGTCAGCAC +
Preference number: 2 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPILGTGR*PGKGQH
Trigger: GTGCTGACCTTTGCCTGGTCACCTGCCTGTGCCTAG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCCTCCAGTCCTAAGATaGCCAGGGGTGGGTGTGAGG +
Preference number: 2 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIPPVLR*PGVGVR
Trigger: CCTCACACCCACCCCTGGGCATCTTAGGACTGGAGG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAGCCCGCCTACTCCTGTaGTACCAACATAGCACACGA +
Preference number: 2 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRARLLL*YQHSTR
Trigger: TCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAGGGGTGGGTGTGAGGTaGAGCCCCACGCAGAGTACG +
Preference number: 2 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTGVGVR*SPTQST
Trigger: CGTACTCTGCGTGGGGCTCCACCTCACACCCACCCC...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCTTGGCACCAGCTGAATaGCCGTCCCCTGTTCCCTCC +
Preference number: 2 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPILAPAE*PSPVPS
Trigger: GGAGGGAACAGGGGACGGCCATTCAGCTGGTGCCAA...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGCTCCCATCCCAGAAGTaGGATGGCAGTGATAAACCT +
Preference number: 2 (lower is better)
Translates to: ADHSEALAMGRSLADSFGLPSQK*DGSDKP
Trigger: AGGTTTATCACTGCCATCCCACTTCTGGGATGGGAG...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGTACAAGGAGGAAGACTaGTCACTCCACGTGGGACTA +
Preference number: 2 (lower is better)
Translates to: ADHSEALAMGRSLADSFGYKEED*SLHVGL
Trigger: TAGTCCCACGTGGAGTGACCAGTCTTCCTCCTTGTA...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGTGAGGCCCTGGCAATaGGCAGGAGCCTTGCTGACT +
Preference number: 2 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKVRPWQ*AGALLT
Trigger: AGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCAC...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGGGCTGCGGCCAGGGCTaGGACCAGTGCACTGACACA +
Preference number: 2 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKGCGQG*DQCTDT
Trigger: TGTGTCAGTGCACTGGTCCCAGCCCTGGCCGCAGCC...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAGCCTTTGGCACCAGCTaGATGGCCGTCCCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTAFGTS*MAVPCS
Trigger: GGAACAGGGGACGGCCATTCAGCTGGTGCCAAAGGC...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGGAAACACGATTGCCATaGCAGCTGGCAGAAGCAATA +
Preference number: 2 (lower is better)
Translates to: ADHSEALAMGRSLADSFGETRLP*QLAEAI
Trigger: TATTGCTTCTGCCAGCTGTCATGGCAATCGTGTTTC...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTTCTCCCCGCTCCTCCTaGAAGCAGGGACAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFSPRSS*KQGQAA
Trigger: AGCTGCCTGTCCCTGCTTTCAGGAGGAGCGGGGAGA...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGGGCAGGAGCCTTGCTaGCTCCTTTGGGCTTTGGGC +
Preference number: 2 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNGQEPC*LLWALG
Trigger: GCCCAAAGCCCAAAGGAGTCAGCAAGGCTCCTGCCC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGTCCAAGCCCCAGGGCTaGGTGGGGAACCAAAGTCTC +
Preference number: 2 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVSKPQG*VGNQSL
Trigger: GAGACTTTGGTTCCCCACGCAGCCCTGGGGCTTGGA...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACGATGGGAAACACGATTaGCATGACAGCTGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: LPLTALCKATHAGTKHPHDGKHD*HDSWQK
Trigger: CTTCTGCCAGCTGTCATGGCAATCGTGTTTCCCATC...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGAAATACAGAAGCCCTTaGTACCTCCCATCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: ADHSEALAMGRSLADSFGKYRSP*YLPSQK
Trigger: CTTCTGGGATGGGAGGTAGCAAGGGCTTCTGTATTT...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGACTTGCGCTGCTGTTTTaGAGCCCACTCCACAGAGAA +
Preference number: 2 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRLALLF*SPLHRE
Trigger: TTCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAAG...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACTACAAGGAGGAAGACTaGTCACTCCACGTGGGACTA +
Preference number: 2 (lower is better)
Translates to: LPLTALCKATHAGTKHPHYKEED*SLHVGL
Trigger: TAGTCCCACGTGGAGTGACCAGTCTTCCTCCTTGTA...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACGGTGGGCTGTGTTTATaGTGCACAGCTCATCTTGTG +
Preference number: 2 (lower is better)
Translates to: LPLTALCKATHAGTKHPHGGLCL*CTAHLV
Trigger: CACAAGATGAGCTGTGCACCATAAACACAGCCCACC...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTAGCTCTGCACAGCACTaGCGAAGGAGGGACGGGCCT +
Preference number: 2 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFSSAQH*RRRDGP
Trigger: AGGCCCGTCCCTCCTTCGCCAGTGCTGTGCAGAGCT...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAAAATTCAGCAGCCCATaGCTGGCTCTGAACCGCCCA +
Preference number: 2 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKKFSSP*LALNRP
Trigger: TGGGCGGTTCAGAGCCAGTCATGGGCTGCTGAATTT...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGTGAGGGCTGCGTTCTaGGAGCTTCCTCTAGGAAGA +
Preference number: 2 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKVRAAF*ELPLGR
Trigger: TCTTCCTAGAGGAAGCTCTCAGAACGCAGCCCTCAC...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGATGTCTGTCCTGCCATTaGCTACAACCCAAAGCCTCA +
Preference number: 2 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRCLSCH*LQPKAS
Trigger: TGAGGCTTTGGGTTGTAGTCAATGGCAGGACAGACA...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTGAACTCCCGACCTCATaGTCCACCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFELPTS*STHLSL
Trigger: GAGGCTGAGGTGGGTGGATCATGAGGTCGGGAGTTC...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGGAACCAAAGTCTCTaGACAGAGAATCCCAACCTT +
Preference number: 2 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLGNQSL*TENPNL
Trigger: AAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCC...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATTCCAAGCCCCAGGGCTaGGTGGGGAACCAAAGTCTC +
Preference number: 2 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNSKPQG*VGNQSL
Trigger: GAGACTTTGGTTCCCCACGCAGCCCTGGGGCTTGGA...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCAGAGTACGGTCATGTaGTTCTTCCAAGCCCCAGGG +
Preference number: 2 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIQSTVM*FFQAPG
Trigger: CCCTGGGGCTTGGAAGAAGCACATGACCGTACTCTG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAACCCTCCTTTCTCTCCTaGTCCTACAACAGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKPSFLS*SYNSCP
Trigger: TGGGCAGCTGTTGTAGGAGCAGGAGAGAAAGGAGGG...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCTGTCTCCTCTTGCGCTaGTGTTTTGCAGCCCACTCC +
Preference number: 2 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPICLLLR*CFAAHS
Trigger: GGAGTGGGCTGCAAAACAGCAGCGCAAGAGGAGACA...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGATCTACCACAGGGACGTaGAGACTTGACCTTTGTGAC +
Preference number: 2 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRSTTGT*RLDLCD
Trigger: GTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGA...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGACAACCCCCATTTCACTaGTCCCAAGACTTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRQPPFH*SQDFAL
Trigger: GAGAGCAAAGTCTTGGGAGCAGTGAAATGGGGGTTG...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGTTGGTTCTTCAAAGCTaGAGCTTGGCAACCAAATGC +
Preference number: 2 (lower is better)
Translates to: ADHSEALAMGRSLADSFGLVLQS*SLATKC
Trigger: GCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAA...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCCTCCCACCCCTTCTTTaGACCTGCTCACCCTTCGCA +
Preference number: 2 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSLPPLL*TCSPFA
Trigger: TGCGAAGGGTGAGCAGGTCCAAAGAAGGGGTGGGAG...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATTTGGCACCAGCTGAATaGCCGTCCCCTGTTCCCTCC +
Preference number: 2 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNLAPAE*PSPVPS
Trigger: GGAGGGAACAGGGGACGGCCATTCAGCTGGTGCCAA...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACGGAAGAGCACAACTGTaGGAGCTGTATTTCTCACCT +
Preference number: 2 (lower is better)
Translates to: LPLTALCKATHAGTKHPHGRAQL*ELYFSP
Trigger: AGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCC...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCTCAGGTCTGCCTGGTaGCTGGGAAGCTTCCATCTA +
Preference number: 2 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPILRSAW*LGSFHL
Trigger: TAGATGGAAGCTTCCCAGCCACCAGGCAGACCTGAG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCGTGGCGCCACCTCCATaGCTCAGGTTCCAAGATGTA +
Preference number: 2 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIVAPPP*LRFQDV
Trigger: TACATCTTGGAACCTGAGCCATGGAGGTGGCGCCAC...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACATTCTCCTCAGGGAGGTaGCGCCACCTCCATGGCTCA +
Preference number: 2 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTFSSGR*RHLHGS
Trigger: TGAGCCATGGAGGTGGCGCCACCTCCCTGAGGAGAA...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CAA 90 bp GACTCAGACCTCCTTCCAGCAGCCATAGAGCTTTATCCCAGTGTCTaGTCCACTAACTTTAGGGCTCCAAAGCTAAGGGAGCGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: DSDLLPAAIELYPSV*STNFRAPKLRERGS
Trigger: GCTGCCTCGCTCCCTTAGCTTTGGAGCCCTAAAGTTAGTGGACAAGACACTGGGATAAAGCTCTATGGCTGCTGGAAGGAGGTCTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCGCCTTTGGCACCAGCTaGATGGCCGTCCCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESAFGTS*MAVPCS
Trigger: GGAACAGGGGACGGCCATTCAGCTGGTGCCAAAGGC...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACGCCTTTGGCACCAGCTaGATGGCCGTCCCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINAFGTS*MAVPCS
Trigger: GGAACAGGGGACGGCCATTCAGCTGGTGCCAAAGGC...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGCTAGTACAGCTTCCATaGGAGGTGTTTCTGAACTCA +
Preference number: 2 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLLVQLP*EVFLNS
Trigger: TGAGTTCAGAAACACCTCTCATGGAAGCTGTACTAG...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACACAAGGGGCAATGGGTTaGGAGCAGAGGAAGAACGGG +
Preference number: 2 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTQGAMG*EQRKNG
Trigger: CCCGTTCTTCCTCTGCTCTCAACCCATTGCCCCTTG...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGATAAACCTAAAAACGTaGGATGCGATGCTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: ADHSEALAMGRSLADSFGINLKT*DAMLSS
Trigger: AGAGGAGAGCATCGCATCTCACGTTTTTAGGTTTAT...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCGCTCCATTTACTCTCTaGCCAGGCTGTATCCCAGAG +
Preference number: 2 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIAPFTL*PGCIPE
Trigger: CTCTGGGATACAGCCTGGTCAGAGAGTAAATGGAGC...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGGTCATGAGTACAGTTTaGCATGAAGAACCTGGAAAC +
Preference number: 2 (lower is better)
Translates to: ADHSEALAMGRSLADSFGVMSTV*HEEPGN
Trigger: GTTTCCAGGTTCTTCATGGCAAACTGTACTCATGAC...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATCTCCCACCCCTTCTTTaGACCTGCTCACCCTTCGCA +
Preference number: 2 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNLPPLL*TCSPFA
Trigger: TGCGAAGGGTGAGCAGGTCCAAAGAAGGGGTGGGAG...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGACTAGTACAGCTTCCATaGGAGGTGTTTCTGAACTCA +
Preference number: 2 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRLVQLP*EVFLNS
Trigger: TGAGTTCAGAAACACCTCTCATGGAAGCTGTACTAG...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGGCCCATGACTGGCTCTaGACCGCCCAGGTGATGGGA +
Preference number: 2 (lower is better)
Translates to: GSHKPDISICLVTRGNYKAHDWL*TAQVMG
Trigger: TCCCATCACCTGGGCGGTTCAGAGCCAGTCATGGGC...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAGAGTACAGTTTGCCATaGAGAACCTGGAAACATGCT +
Preference number: 2 (lower is better)
Translates to: GSSGRNSERGSVVCDDPREYSLP*RTWKHA
Trigger: AGCATGTTTCCAGGTTCTTCATGGCAAACTGTACTC...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGTGTCTGTCCTGCCATTaGCTACAACCCAAAGCCTCA +
Preference number: 2 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKCLSCH*LQPKAS
Trigger: TGAGGCTTTGGGTTGTAGTCAATGGCAGGACAGACA...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCGAACTCCCAGTCCTTTaGAAACCTCAAGCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSELPVL*KPQAPP
Trigger: AGGAGGGGCTTGAGGTTTGCAAAGGACTGGGAGTTC...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGTGCTCCTACAACAGCTaGCCATGGCAACAAGAGGCA +
Preference number: 2 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVCSYNS*PWQQEA
Trigger: TGCCTCTTGTTGCCATGGGCAGCTGTTGTAGGAGCA...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGCTGCTTCCTTGCTTTTaGTCATGTGTTTTTCATCTC +
Preference number: 2 (lower is better)
Translates to: ADHSEALAMGRSLADSFGLLPCF*SCVFHL
Trigger: GAGATGAAAAACACATGAGCAAAAGCAAGGAAGCAG...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCTTGGTTCTTCAAAGCTaGAGCTTGGCAACCAAATGC +
Preference number: 2 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPLVLQS*SLATKC
Trigger: GCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAA...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
3UTR-3UTR CCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGTACAAGGAGGAAGACTaGTCACTCCACGTGGGACTA +
Preference number: 2 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKYKEED*SLHVGL
Trigger: TAGTCCCACGTGGAGTGACCAGTCTTCCTCCTTGTA...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAGCACAGCTCATCTTGTaGGCCACCCTTCCACAGTCA +
Preference number: 2 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTAQLIL*ATLPQS
Trigger: TGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGC...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGTGGGCTGTGTTTATaGTGCACAGCTCATCTTGTG +
Preference number: 2 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKGGLCL*CTAHLV
Trigger: CACAAGATGAGCTGTGCACCATAAACACAGCCCACC...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAATGACAAATCAGAGGTaGGCTGTGTTTATGGTGCAC +
Preference number: 2 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRMTNQR*AVFMVH
Trigger: GTGCACCATAAACACAGCCCACCTCTGATTTGTCAT...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGACTTTCCCAGACCATCTaGTCTACCCTGATCTTATCT +
Preference number: 2 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRLSQTI*STLILS
Trigger: AGATAAGATCAGGGTAGACCAGATGGTCTGGGAAAG...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCAGCAGTAGTTGTCACTaGCTCACAGCAGCTCACTCT +
Preference number: 2 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPISSSCH*LTAAHS
Trigger: AGAGTGAGCTGCTGTGAGCCAGTGACAACTACTGCT...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CAA 90 bp CATGACAAATCAGAGGTGGGCTGTGTTTATGGTGCACAGCTCATCTaGTGGGCCACCCTTCCACAGTCAGGTAATGGTGCAAGTTTCCTC +
Preference number: 2 (lower is better)
Translates to: HDKSEVGCVYGAQLI*WATLPQSGNGASFL
Trigger: GAGGAAACTTGCACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAACACAGCCCACCTCTGATTTGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATTTCCCCCTCACAAGCTaGCAGGCACATGGAAGTAAC +
Preference number: 2 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNFPLTS*QAHGSN
Trigger: GTTACTTCCATGTGCCTGTCAGCTTGTGAGGGGGAA...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACCCTAAGGAAATCCCGTaGGGGCTGCGTTCTGAGAGC +
Preference number: 2 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINPKEIP*GLRSES
Trigger: GCTCTCAGAACGCAGCCCTCACGGGATTTCCTTAGG...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTGAGACCAGCAGGATCTaGTCCGGAAATGTCTGGGTT +
Preference number: 2 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFETSRI*SGNVWV
Trigger: AACCCAGACATTTCCGGATCAGATCCTGCTGGTCTC...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGAAATCCCGTGAGGGCTaGGTTCTGAGAGCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKKSREG*VLRASS
Trigger: AGAGGAAGCTCTCAGAACGCAGCCCTCACGGGATTT...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGCTTGCGCTGCTGTTTTaGAGCCCACTCCACAGAGAA +
Preference number: 2 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKLALLF*SPLHRE
Trigger: TTCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAAG...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACATCATCTTCCCCTAACTaGTCTGTGCAAGGCCACCCA +
Preference number: 2 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTSSSPN*SVQGHP
Trigger: TGGGTGGCCTTGCACAGAGCAGTTAGGGGAAGATGA...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAAGGTGCTGCCACACCTaGTCCTCTGCTCCATTTACT +
Preference number: 2 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTRCCHT*SSAPFT
Trigger: AGTAAATGGAGCAGAGGAGCAGGTGTGGCAGCACCT...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612932.6
ENST00000665913.1
3UTR-3UTR GCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCATTTAAATGAGCTCTaGACAGCACTGGCGAAGGAG +
Preference number: 2 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIHLNEL*TALAKE
Trigger: CTCCTTCGCCAGTGCTGTGCAGAGCTCATTTAAATG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCTTCAAAGCTGGAGCTTaGCAACCAAATGCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIFKAGA*QPNALG
Trigger: ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAA...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCTATCTCAAGGGGCAATaGGTTGAGAGCAGAGGAAGA +
Preference number: 2 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIYLKGQ*VESRGR
Trigger: TCTTCCTCTGCTCTCAACCCATTGCCCCTTGAGATA...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCAGAAAGAGAGTCCCATaGAACACACGCAAAGGAGTC +
Preference number: 2 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIRKRVP*NTRKGV
Trigger: GACTCCTTTGCGTGTGTTCCATGGGACTCTCTTTCT...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGTCTAGAAAACCGCACTaGAAAGGATTCTTTAACCAT +
Preference number: 2 (lower is better)
Translates to: ADHSEALAMGRSLADSFGSRKPH*KGFFNH
Trigger: ATGGTTAAAGAATCCTTTCCAGTGCGGTTTTCTAGA...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACACCATAGTGAGGCCCTaGCAATGGGCAGGAGCCTTG +
Preference number: 2 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINTIVRP*QWAGAL
Trigger: CAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGT...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGGAAACACGATTGCCATaGCAGCTGGCAGAAGCAATA +
Preference number: 2 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVETRLP*QLAEAI
Trigger: TATTGCTTCTGCCAGCTGTCATGGCAATCGTGTTTC...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGGGCAATGCTCCCAGATaGGGCAGTCCTATAAATTAC +
Preference number: 2 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVGNAPR*GSPINY
Trigger: GTAATTTATAGGACTGCCTCATCTGGGAGCATTGCC...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAGGTTTGTTTTGTACCTaGATGTATGAGTTCTCCAGA +
Preference number: 2 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRGLFCT*MYEFSR
Trigger: TCTGGAGAACTCATACATTCAGGTACAAAACAAACC...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTGGCACAAACCCCAACTaGCTTCAAGGTGAGTTTTCC +
Preference number: 2 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFGTNPN*LQGEFS
Trigger: GGAAAACTCACCTTGAAGGCAGTTGGGGTTTGTGCC...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACCCCTCCTTTCTCTCCTaGTCCTACAACAGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINPSFLS*SYNSCP
Trigger: TGGGCAGCTGTTGTAGGAGCAGGAGAGAAAGGAGGG...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGCACTGTTCAGTACATaGCATGCAGATTTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKALFST*HADFCF
Trigger: GAAGCAGAAATCTGCATGGCATGTACTGAACAGTGC...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGGCTCTAACAGGGCTGTaGACTGTTCAGTACATGCCA +
Preference number: 2 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKALTGL*TVQYMP
Trigger: TGGCATGTACTGAACAGTGCACAGCCCTGTTAGAGC...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACCAGGGCTGGGACCAGTaGACTGACACAGACACAGTT +
Preference number: 2 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINQGWDQ*TDTDTV
Trigger: AACTGTGTCTGTGTCAGTGCACTGGTCCCAGCCCTG...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGGGAAGAGCACAACTGTaGGAGCTGTATTTCTCACCT +
Preference number: 2 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVGRAQL*ELYFSP
Trigger: AGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCC...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGATGACAAATCAGAGGTaGGCTGTGTTTATGGTGCAC +
Preference number: 2 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKMTNQR*AVFMVH
Trigger: GTGCACCATAAACACAGCCCACCTCTGATTTGTCAT...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTCTTCAGGCTCTATATTaGGGTGGCACTTCCTGCAAG +
Preference number: 2 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFLQALY*GGTSCK
Trigger: CTTGCAGGAAGTGCCACCCCAATATAGAGCCTGAAG...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGCTTTCCCAGACCATCTaGTCTACCCTGATCTTATCT +
Preference number: 2 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKLSQTI*STLILS
Trigger: AGATAAGATCAGGGTAGACCAGATGGTCTGGGAAAG...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGTCTAGAAAACCGCACTaGAAAGGATTCTTTAACCAT +
Preference number: 2 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLSRKPH*KGFFNH
Trigger: ATGGTTAAAGAATCCTTTCCAGTGCGGTTTTCTAGA...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTTGCAGGAGTTTCCTTTaGCCACACCTTTCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFCRSFL*PHLSPQ
Trigger: CTGAGGAGAAAGGTGTGGCCAAAGGAAACTCCTGCA...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGAAACACGATTGCCATaGCAGCTGGCAGAAGCAATA +
Preference number: 2 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNETRLP*QLAEAI
Trigger: TATTGCTTCTGCCAGCTGTCATGGCAATCGTGTTTC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCGAGTACAGTTTGCCATaGAGAACCTGGAAACATGCT +
Preference number: 2 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSEYSLP*RTWKHA
Trigger: AGCATGTTTCCAGGTTCTTCATGGCAAACTGTACTC...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAATAAACCTAAAAACGTaGGATGCGATGCTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKINLKT*DAMLSS
Trigger: AGAGGAGAGCATCGCATCTCACGTTTTTAGGTTTAT...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTACTCACAATGTCATATaGATTGGCCATGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFTHNVI*IGHGQL
Trigger: CAGCTGGCCATGGCCAATTCATATGACATTGTGAGT...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGGCAATGCTCCCAGATaGGGCAGTCCTATAAATTAC +
Preference number: 2 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNGNAPR*GSPINY
Trigger: GTAATTTATAGGACTGCCTCATCTGGGAGCATTGCC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGCCCCTTCTTTGGACCTaGTCACCCTTCGCACCACTT +
Preference number: 2 (lower is better)
Translates to: GSHKPDISICLVTRGNYKPLLWT*SPFAPL
Trigger: AAGTGGTGCGAAGGGTGAGCAGGTCCAAAGAAGGGG...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAAAATACAGAAGCCCTTaGTACCTCCCATCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTKYRSP*YLPSQK
Trigger: CTTCTGGGATGGGAGGTAGCAAGGGCTTCTGTATTT...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACTCATCTTCCCCTAACTaGTCTGTGCAAGGCCACCCA +
Preference number: 2 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINSSSPN*SVQGHP
Trigger: TGGGTGGCCTTGCACAGAGCAGTTAGGGGAAGATGA...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CAA 90 bp CTTGCTTTTGCTCATGTGTTTTTCATCTCACTGTCTGTCCTGCCATaGACTACAACCCAAAGCCTCAGAGGCACAGAACTTTCCCAGACC +
Preference number: 2 (lower is better)
Translates to: LAFAHVFFISLSVLP*TTTQSLRGTELSQT
Trigger: GGTCTGGGAAAGTTCTGTGCCTCTGAGGCTTTGGGTTGTAGTCAATGGCAGGACAGACAGTGAGATGAAAAACACATGAGCAAAAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATCATGAGAGGTGTTTCTaGACTCAGGTTCCTAAACCT +
Preference number: 2 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNHERCF*TQVPKP
Trigger: AGGTTTAGGAACCTGAGTTCAGAAACACCTCTCATG...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACACATGAGAGGTGTTTCTaGACTCAGGTTCCTAAACCT +
Preference number: 2 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTHERCF*TQVPKP
Trigger: AGGTTTAGGAACCTGAGTTCAGAAACACCTCTCATG...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGAGTACAGTTTGCCATaGAGAACCTGGAAACATGCT +
Preference number: 2 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNEYSLP*RTWKHA
Trigger: AGCATGTTTCCAGGTTCTTCATGGCAAACTGTACTC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGTTAGTATCTGTCTTGTaGCACGAGGCAACTATAAGC +
Preference number: 2 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVLVSVL*HEATIS
Trigger: GCTTATAGTTGCCTCGTGTCACAAGACAGATACTAA...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGAGGAATACATTTAAATaGGCTCTGCACAGCACTGGC +
Preference number: 2 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKRNTFK*ALHSTG
Trigger: GCCAGTGCTGTGCAGAGCTCATTTAAATGTATTCCT...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCGGCACAAACCCCAACTaGCTTCAAGGTGAGTTTTCC +
Preference number: 2 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESGTNPN*LQGEFS
Trigger: GGAAAACTCACCTTGAAGGCAGTTGGGGTTTGTGCC...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGAAGAACCTGGAAACATaGTCCATTAAATTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKKNLET*SIKFSS
Trigger: GCTGCTGAATTTAATGGAGCATGTTTCCAGGTTCTT...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTTCTGCTTGATGTaGAGCAGTCACCTAAAAGCT +
Preference number: 2 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIIFCLM*SSHLKA
Trigger: AGCTTTTAGGTGACTGCTGCACATCAAGCAGAAAAT...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGTTCAGTACATGCCATaGAGATTTCTGCTTCCTTGC +
Preference number: 2 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNVQYMP*RFLLPC
Trigger: GCAAGGAAGCAGAAATCTGCATGGCATGTACTGAAC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGCACTTCCTGCAAGATaGCGAGTTATATTACTTGTA +
Preference number: 2 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKALPAR*RVILLV
Trigger: TACAAGTAATATAACTCGCCATCTTGCAGGAAGTGC...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTCTTAGGAATCAACAGTaGGTCCCTAGATGTAAGCCT +
Preference number: 2 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFLRNQQ*VPRCKP
Trigger: AGGCTTACATCTAGGGACCCACTGTTGATTCCTAAG...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCGGGAACCAAAGTCTCTaGACAGAGAATCCCAACCTT +
Preference number: 2 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESGNQSL*TENPNL
Trigger: AAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCC...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTGTCATGAGTACAGTTTaGCATGAAGAACCTGGAAAC +
Preference number: 2 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFVMSTV*HEEPGN
Trigger: GTTTCCAGGTTCTTCATGGCAAACTGTACTCATGAC...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCTTCAAAGCTGGAGCTTaGCAACCAAATGCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESFKAGA*QPNALG
Trigger: ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAA...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACAGAAAGAGAGTCCCATaGAACACACGCAAAGGAGTC +
Preference number: 2 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINRKRVP*NTRKGV
Trigger: GACTCCTTTGCGTGTGTTCCATGGGACTCTCTTTCT...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACCTCACTCCTAAGTCATaGGTACAGTTTGCCATGAAG +
Preference number: 2 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINLTPKS*VQFAMK
Trigger: CTTCATGGCAAACTGTACTCATGACTTAGGAGTGAG...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGCACTTCCTGCAAGATaGCGAGTTATATTACTTGTA +
Preference number: 2 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNALPAR*RVILLV
Trigger: TACAAGTAATATAACTCGCCATCTTGCAGGAAGTGC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR TCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACTTGTACCTGAATGTATaGGTTCTCCAGAAGAAACCC +
Preference number: 2 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINLYLNV*VLQKKP
Trigger: GGGTTTCTTCTGGAGAACTCATACATTCAGGTACAA...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR GCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTAGATGGCTACATGTATaGAATAGCACAAATTCAGTG +
Preference number: 2 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFRWLHV*NSTNSV
Trigger: CACTGAATTTGTGCTATTGCATACATGTAGCCATCT...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGCCAGCTAAGGCCAATTaGCTAGGTTTTGCCCAATAT +
Preference number: 2 (lower is better)
Translates to: GSHKPDISICLVTRGNYKPAKAN*LGFAQY
Trigger: ATATTGGGCAAAACCTAGCCAATTGGCCTTAGCTGG...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 72 bp GCATGCAGGGCTGGCTTCCCGGGAGGTAGATGGGAGTaGGACGGGATAGCAGGTGTGGAGAGGACAGGAAGG +
Preference number: 3 (lower is better)
Translates to: ACRAGFPGGRWE*DGIAGVERTGR
Trigger: CCTTCCTGTCCTCTCCACACCTGCTATCCCGTCCCACTCCCATCTACCTCCCGGGAAGCCAGCCCTGCATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGCCTCCCACCCCTTCTTaGGACCTGCTCACCCTTCGC +
Preference number: 3 (lower is better)
Translates to: ADHSEALAMGRSLADSFGPPTPS*DLLTLR
Trigger: GCGAAGGGTGAGCAGGTCCAAAGAAGGGGTGGGAGG...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp CCCATGCCTCCCCCTCATCTTCCCCTAACTGCTCTGTaGAAGGCCACCCATGCAGGCACCAAACACCCACAC +
Preference number: 3 (lower is better)
Translates to: PMPPPHLPLTAL*KATHAGTKHPH
Trigger: GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAGATGAGGGGGAGGCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 72 bp AAGGGGAAGGAGCAGGAGCCATGCAGGAGTTTCCTTTaGCCACACCTTTCTCCTCAGGGAGGTGGCGCCACC +
Preference number: 3 (lower is better)
Translates to: KGKEQEPCRSFL*PHLSPQGGGAT
Trigger: GGTGGCGCCACCTCCCTGAGGAGAAAGGTGTGGCCAAAGGAAACTCCTGCATGGCTCCTGCTCCTTCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 72 bp AACTCAGCATGCAGGGCTGGCTTCCCGGGAGGTAGATaGGAGTGGGACGGGATAGCAGGTGTGGAGAGGACA +
Preference number: 3 (lower is better)
Translates to: NSACRAGFPGGR*EWDGIAGVERT
Trigger: TGTCCTCTCCACACCTGCTATCCCGTCCCACTCCCATCTACCTCCCGGGAAGCCAGCCCTGCATGCTGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGTGCACAGCTCATCTaGTGGGCCACCCTTCCACAG +
Preference number: 3 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLGAQLI*WATLPQ
Trigger: CTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACC...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACGCCTTGCTGACTCCTTaGGGCTTTGGGCTCCACCTC +
Preference number: 3 (lower is better)
Translates to: LPLTALCKATHAGTKHPHALLTP*GFGLHL
Trigger: GAGGTGGAGCCCAAAGCCCAAAGGAGTCAGCAAGGC...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp GAGAAAGGACTAGGCTGCGGCCAGGGCTGGGACCAGTaGACTGACACAGACACAGTTCAACACGACACTCCC +
Preference number: 3 (lower is better)
Translates to: EKGLGCGQGWDQ*TDTDTVQHDTP
Trigger: GGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTCCCAGCCCTGGCCGCAGCCTAGTCCTTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp TGTTTTGCAGCCCACTCCACAGAGAAAGGACTAGGCTaGGGCCAGGGCTGGGACCAGTGCACTGACACAGAC +
Preference number: 3 (lower is better)
Translates to: CFAAHSTEKGLG*GQGWDQCTDTD
Trigger: GTCTGTGTCAGTGCACTGGTCCCAGCCCTGGCCGCAGCCTAGTCCTTTCTCTGTGGAGTGGGCTGCAAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 72 bp TGGGCATTCCAACAGCCAGCTACCCAAAGTGGCACCTaGACCCTACCTGTCCCTTGGACAGGTTCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: WAFQQPATQSGT*TLPVPWTGSGP
Trigger: AGGCCCAGAACCTGTCCAAGGGACAGGTAGGGTCCAGGTGCCACTTTGGGTAGCTGGCTGTTGGAATGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGAACTCCCAGTCCTTaGCAAACCTCAAGCCCCTCC +
Preference number: 3 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLGTPSP*QTSSPS
Trigger: GGAGGGGCTTGAGGTTTGCAAAGGACTGGGAGTTCC...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCACTTCAAAGCTGGAGCTaGGCAACCAAATGCCCTTGG +
Preference number: 3 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPLQSWS*ATKCPW
Trigger: CCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAG...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGCTTCAAAGCTGGAGCTaGGCAACCAAATGCCCTTGG +
Preference number: 3 (lower is better)
Translates to: ADHSEALAMGRSLADSFGLQSWS*ATKCPW
Trigger: CCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAG...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCCTCCCACCCCTTCTTaGGACCTGCTCACCCTTCGC +
Preference number: 3 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIPPTPS*DLLTLR
Trigger: GCGAAGGGTGAGCAGGTCCAAAGAAGGGGTGGGAGG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACGAAGACTGTCTCCTCTaGCGCTGCTGTTTTGCAGCC +
Preference number: 3 (lower is better)
Translates to: LPLTALCKATHAGTKHPHEDCLL*RCCFAA
Trigger: GGCTGCAAAACAGCAGCGCAAGAGGAGACAGTCTTC...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp CACCCACCCTCCTTTCTCTCCTGCTCCTACAACAGCTaGCCATGGCAACAAGAGGCAGATTCCCCCTTCCTC +
Preference number: 3 (lower is better)
Translates to: HPPSFLSCSYNS*PWQQEADSPFL
Trigger: GAGGAAGGGGGAATCTGCCTCTTGTTGCCATGGGCAGCTGTTGTAGGAGCAGGAGAGAAAGGAGGGTGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 72 bp ACCAGTGTGGGCATTCCAACAGCCAGCTACCCAAAGTaGCACCTGGACCCTACCTGTCCCTTGGACAGGTTC +
Preference number: 3 (lower is better)
Translates to: TSVGIPTASYPK*HLDPTCPLDRF
Trigger: GAACCTGTCCAAGGGACAGGTAGGGTCCAGGTGCCACTTTGGGTAGCTGGCTGTTGGAATGCCCACACTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGCTTCAAAGCTGGAGCTaGGCAACCAAATGCCCTTGG +
Preference number: 3 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLLQSWS*ATKCPW
Trigger: CCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAG...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAACTCTAACTCTGCCTTaGGCACCAGCTGAATGGCCG +
Preference number: 3 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRTLTLP*APAEWP
Trigger: CGGCCATTCAGCTGGTGCCAAAGGCAGAGTTAGAGT...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAGAAGACTGTCTCCTCTaGCGCTGCTGTTTTGCAGCC +
Preference number: 3 (lower is better)
Translates to: GSSGRNSERGSVVCDDPREDCLL*RCCFAA
Trigger: GGCTGCAAAACAGCAGCGCAAGAGGAGACAGTCTTC...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp AGAGTACGGTCATGTGCTTCTTCCAAGCCCCAGGGCTaGGTGGGGAACCAAAGTCTCTGCACAGAGAATCCC +
Preference number: 3 (lower is better)
Translates to: RVRSCASSKPQG*VGNQSLCTENP
Trigger: GGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCCCTGGGGCTTGGAAGAAGCACATGACCGTACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp GAGGAACTACGATCGCAGTCCAGCTGCAACCAAACATaGATGTCTTCCCGCCGTGGCTGGCTGCTTTCTGTC +
Preference number: 3 (lower is better)
Translates to: EELRSQSSCNQT*MSSRRGWLLSV
Trigger: GACAGAAAGCAGCCAGCCACGGCGGGAAGACATGCATGTTTGGTTGCAGCTGGACTGCGATCGTAGTTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp CTCTATCTCCAGGAGGAACTACGATCGCAGTCCAGCTaGAACCAAACATGCATGTCTTCCCGCCGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: LYLQEELRSQSS*NQTCMSSRRGW
Trigger: CCAGCCACGGCGGGAAGACATGCATGTTTGGTTGCAGCTGGACTGCGATCGTAGTTCCTCCTGGAGATAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 72 bp CACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGTaGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGT +
Preference number: 3 (lower is better)
Translates to: HSSTRHSPGGER*VVRLGHTSSVG
Trigger: ACCAACTGAGGAGGTGTGACCCAACCTCACCACCCACCTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCCTTCAAAGCTGGAGCTaGGCAACCAAATGCCCTTGG +
Preference number: 3 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPLQSWS*ATKCPW
Trigger: CCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAG...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
3UTR-3UTR CAA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCGGAACTCCCAGTCCTTaGCAAACCTCAAGCCCCTCC +
Preference number: 3 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIGTPSP*QTSSPS
Trigger: GGAGGGGCTTGAGGTTTGCAAAGGACTGGGAGTTCC...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCGTCCCAAAGAGCCGGTaGCCACCCACTTACCTAGTG +
Preference number: 3 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIVPKSR*PPTYLV
Trigger: CACTAGGTAAGTGGGTGGCAACCGGCTCTTTGGGAC...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 72 bp CACACCTTTCTCCTCAGGGAGGTGGCGCCACCTCCATaGCTCAGGTTCCAAGATGTAACATTCACTTGGCCT +
Preference number: 3 (lower is better)
Translates to: HTFLLREVAPPP*LRFQDVTFTWP
Trigger: AGGCCAAGTGAATGTTACATCTTGGAACCTGAGCCATGGAGGTGGCGCCACCTCCCTGAGGAGAAAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTGGCAACCAAATGCCCTaGGTGGTGACCAGCAGGGAG +
Preference number: 3 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFGNQMP*VVTSRE
Trigger: CTCCCTGCTGGTCACCACCAAGGGCATTTGGTTGCC...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCACTCTAACTCTGCCTTaGGCACCAGCTGAATGGCCG +
Preference number: 3 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPITLTLP*APAEWP
Trigger: CGGCCATTCAGCTGGTGCCAAAGGCAGAGTTAGAGT...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAGCCTTGCTGACTCCTTaGGGCTTTGGGCTCCACCTC +
Preference number: 3 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTALLTP*GFGLHL
Trigger: GAGGTGGAGCCCAAAGCCCAAAGGAGTCAGCAAGGC...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAATGCAGGAGTTTCCTTaGGCCACACCTTTCTCCTCA +
Preference number: 3 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRMQEFP*ATPFSS
Trigger: TGAGGAGAAAGGTGTGGCCAAAGGAAACTCCTGCAT...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp ACCAAACACCCACACCTGACGAAGACTGTCTCCTCTTaGGCTGCTGTTTTGCAGCCCACTCCACAGAGAAAG +
Preference number: 3 (lower is better)
Translates to: TKHPHLTKTVSS*AAVLQPTPQRK
Trigger: CTTTCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAAGAGGAGACAGTCTTCGTCAGGTGTGGGTGTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp AGTGCCCACACCAAAACCCCCGCCCGCCTACTCCTGTaGTACCAACATAGCACACGAATTTCAAGTAACAGC +
Preference number: 3 (lower is better)
Translates to: SAHTKTPARLLL*YQHSTRISSNS
Trigger: GCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGCGGGGGTTTTGGTGTGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 72 bp GAGGTGGGCTGTGTTTATGGTGCACAGCTCATCTTGTaGGCCACCCTTCCACAGTCAGGTAATGGTGCAAGT +
Preference number: 3 (lower is better)
Translates to: EVGCVYGAQLIL*ATLPQSGNGAS
Trigger: ACTTGCACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAACACAGCCCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAAAAATACAGAAGCCCTaGCTACCTCCCATCCCAGAA +
Preference number: 3 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRKIQKP*LPPIPE
Trigger: TTCTGGGATGGGAGGTAGCAAGGGCTTCTGTATTTT...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAACAATGTCATATGAATaGGCCATGGCCAGCTGCAGA +
Preference number: 3 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRTMSYE*AMASCR
Trigger: TCTGCAGCTGGCCATGGCCAATTCATATGACATTGT...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGAGGTGGGTGGTGAGGTaGGGTCACACCTCCTCAGTT +
Preference number: 3 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKRWVVR*GHTSSV
Trigger: AACTGAGGAGGTGTGACCCAACCTCACCACCCACCT...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 72 bp CATGCTCCATTAAATTCAGCAGCCCATGACTGGCTCTaGACCGCCCAGGTGATGGGAAACACGATTGCCATG +
Preference number: 3 (lower is better)
Translates to: HAPLNSAAHDWL*TAQVMGNTIAM
Trigger: CATGGCAATCGTGTTTCCCATCACCTGGGCGGTTCAGAGCCAGTCATGGGCTGCTGAATTTAATGGAGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp TATTCTTTTCGAGACCACCCACCCTCCTTTCTCTCCTaGTCCTACAACAGCTGCCCATGGCAACAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: YSFRDHPPSFLS*SYNSCPWQQEA
Trigger: TGCCTCTTGTTGCCATGGGCAGCTGTTGTAGGAGCAGGAGAGAAAGGAGGGTGGGTGGTCTCGAAAAGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp ATGCTCTCCTCTGACCTAAGGAAATCCCGTGAGGGCTaGGTTCTGAGAGCTTCCTCTAGGAAGAGCACAACT +
Preference number: 3 (lower is better)
Translates to: MLSSDLRKSREG*VLRASSRKSTT
Trigger: AGTTGTGCTCTTCCTAGAGGAAGCTCTCAGAACGCAGCCCTCACGGGATTTCCTTAGGTCAGAGGAGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAGTCACACCTCCTCAGTaGGTTTGTTTTGTACCTGAA +
Preference number: 3 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRVTPPQ*VCFVPE
Trigger: TTCAGGTACAAAACAAACCAACTGAGGAGGTGTGAC...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGTCTTGCGCTGCTGTTTaGCAGCCCACTCCACAGAGA +
Preference number: 3 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKSCAAV*QPTPQR
Trigger: TCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAAGA...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGACTTTATCCCAGTGTCTaGTCCACTAACTTTAGGGCT +
Preference number: 3 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRLYPSV*STNFRA
Trigger: AGCCCTAAAGTTAGTGGACAAGACACTGGGATAAAG...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACACTGTCTGTCCTGCCATaGACTACAACCCAAAGCCTC +
Preference number: 3 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTLSVLP*TTTQSL
Trigger: GAGGCTTTGGGTTGTAGTCAATGGCAGGACAGACAG...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGTTGGCCAAGCTGGTCTaGAACTCCCGACCTCATGAT +
Preference number: 3 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKLAKLV*NSRPHD
Trigger: ATCATGAGGTCGGGAGTTCAAGACCAGCTTGGCCAA...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 72 bp AACCTGGAAACATGCTCCATTAAATTCAGCAGCCCATaGCTGGCTCTGAACCGCCCAGGTGATGGGAAACAC +
Preference number: 3 (lower is better)
Translates to: NLETCSIKFSSP*LALNRPGDGKH
Trigger: GTGTTTCCCATCACCTGGGCGGTTCAGAGCCAGTCATGGGCTGCTGAATTTAATGGAGCATGTTTCCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp AATGAGGACACACACACACACACACATGCATGCATATaGACACACACAGACTCAGACCTCCTTCCAGCAGCC +
Preference number: 3 (lower is better)
Translates to: NEDTHTHTHACI*THTDSDLLPAA
Trigger: GGCTGCTGGAAGGAGGTCTGAGTCTGTGTGTGTGCATATGCATGCATGTGTGTGTGTGTGTGTGTCCTCATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp CCAGCGCCTGTCTCTATGATCCAACCCCCATTTCACTaGTCCCAAGACTTTGCTCTCCATTTTATCAAGGCC +
Preference number: 3 (lower is better)
Translates to: PAPVSMIQPPFH*SQDFALHFIKA
Trigger: GGCCTTGATAAAATGGAGAGCAAAGTCTTGGGAGCAGTGAAATGGGGGTTGGATCATAGAGACAGGCGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGATCTGCTTCCTTGCTTTaGCTCATGTGTTTTTCATCT +
Preference number: 3 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRSASLL*LMCFSS
Trigger: AGATGAAAAACACATGAGCAAAAGCAAGGAAGCAGA...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACTCTTGCGCTGCTGTTTaGCAGCCCACTCCACAGAGA +
Preference number: 3 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINSCAAV*QPTPQR
Trigger: TCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAAGA...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 72 bp ATTAAAGACCATTGGAGTTTTTCTCCCCGCTCCTCCTaGAAGCAGGGACAGGCAGCTCTCAAATCGGCATCT +
Preference number: 3 (lower is better)
Translates to: IKDHWSFSPRSS*KQGQAALKSAS
Trigger: AGATGCCGATTTGAGAGCTGCCTGTCCCTGCTTTCAGGAGGAGCGGGGAGAAAAACTCCAATGGTCTTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 72 bp TCCAATCATTTTGTGCTGAGTGTGAAGGCTCCAATGTaGAAGCAGGGTCTACCACAGGGACGTGCAGACTTG +
Preference number: 3 (lower is better)
Translates to: SNHFVLSVKAPM*KQGLPQGRADL
Trigger: CAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCACATTGGAGCCTTCACACTCAGCACAAAATGATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGAAAATACAGAAGCCCTaGCTACCTCCCATCCCAGAA +
Preference number: 3 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKKIQKP*LPPIPE
Trigger: TTCTGGGATGGGAGGTAGCAAGGGCTTCTGTATTTT...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACTTGGCCAAGCTGGTCTaGAACTCCCGACCTCATGAT +
Preference number: 3 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINLAKLV*NSRPHD
Trigger: ATCATGAGGTCGGGAGTTCAAGACCAGCTTGGCCAA...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 72 bp CCCAGAAGTGGGATGGCAGTGATAAACCTAAAAACGTaGGATGCGATGCTCTCCTCTGACCTAAGGAAATCC +
Preference number: 3 (lower is better)
Translates to: PRSGMAVINLKT*DAMLSSDLRKS
Trigger: GGATTTCCTTAGGTCAGAGGAGAGCATCGCATCTCACGTTTTTAGGTTTATCACTGCCATCCCACTTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 72 bp CTGGTGGCTGGGAAGCTTCCATCTAGAAAACCGCACTaGAAAGGATTCTTTAACCATGTTGCTCTAACAGGG +
Preference number: 3 (lower is better)
Translates to: LVAGKLPSRKPH*KGFFNHVALTG
Trigger: CCCTGTTAGAGCAACATGGTTAAAGAATCCTTTCCAGTGCGGTTTTCTAGATGGAAGCTTCCCAGCCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 72 bp TCGAGTTTCTTAAAAACAACCAAAAACGTACAGCAGTaGCTATGCCACAGGCAGCACCAGTGTGGGCATTCC +
Preference number: 3 (lower is better)
Translates to: SSFLKTTKNVQQ*LCHRQHQCGHS
Trigger: GGAATGCCCACACTGGTGCTGCCTGTGGCATAGCCACTGCTGTACGTTTTTGGTTGTTTTTAAGAAACTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGGCGAGTTATATTACTaGTACTCTCACGAGGCAACA +
Preference number: 3 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNGELYY*YSHEAT
Trigger: TGTTGCCTCGTGAGAGTACAAGTAATATAACTCGCC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACATCCTTGATTTTCTGCTaGATGTGCAGCAGTCACCTA +
Preference number: 3 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTSLIFC*MCSSHL
Trigger: TAGGTGACTGCTGCACATCAAGCAGAAAATCAAGGA...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGTCCTTGATTTTCTGCTaGATGTGCAGCAGTCACCTA +
Preference number: 3 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKSLIFC*MCSSHL
Trigger: TAGGTGACTGCTGCACATCAAGCAGAAAATCAAGGA...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACAAAATACAGAAGCCCTaGCTACCTCCCATCCCAGAA +
Preference number: 3 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINKIQKP*LPPIPE
Trigger: TTCTGGGATGGGAGGTAGCAAGGGCTTCTGTATTTT...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 72 bp GCAGGATCTGATCCGGAAATGTCTGGGTTGCTAGAATaGACACAAGAAAATACAGAAGCCCTTGCTACCTCC +
Preference number: 3 (lower is better)
Translates to: AGSDPEMSGLLE*TQENTEALATS
Trigger: GGAGGTAGCAAGGGCTTCTGTATTTTCTTGTGTTCATTCTAGCAACCCAGACATTTCCGGATCAGATCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 72 bp CAGGAAGCCACAAACCTGACATTAGTATCTGTCTTGTaGCACGAGGCAACTATAAGCATGGGGAACCCAGAA +
Preference number: 3 (lower is better)
Translates to: QEATNLTLVSVL*HEATISMGNPE
Trigger: TTCTGGGTTCCCCATGCTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 72 bp ACTACCATGGAAGCCAAGGAAAGAAGAGGTACCACATaGCAAATCAGAGGTGGGCTGTGTTTATGGTGCACA +
Preference number: 3 (lower is better)
Translates to: TTMEAKERRGTT*QIRGGLCLWCT
Trigger: TGTGCACCATAAACACAGCCCACCTCTGATTTGTCATGTGGTACCTCTTCTTTCCTTGGCTTCCATGGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 72 bp ATGCAGGAGTCACTACTTCTCCCAGCTAAGGCCAATTaGCTAGGTTTTGCCCAATATTCTTTTCGAGACCAC +
Preference number: 3 (lower is better)
Translates to: MQESLLLPAKAN*LGFAQYSFRDH
Trigger: GTGGTCTCGAAAAGAATATTGGGCAAAACCTAGCCAATTGGCCTTAGCTGGGAGAAGTAGTGACTCCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 72 bp TTCAGGCTCTATATTGGGGTGGCACTTCCTGCAAGATaGCGAGTTATATTACTTGTACTCTCACGAGGCAAC +
Preference number: 3 (lower is better)
Translates to: FRLYIGVALPAR*RVILLVLSRGN
Trigger: GTTGCCTCGTGAGAGTACAAGTAATATAACTCGCCATCTTGCAGGAAGTGCCACCCCAATATAGAGCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACGGCGAGTTATATTACTaGTACTCTCACGAGGCAACA +
Preference number: 3 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINGELYY*YSHEAT
Trigger: TGTTGCCTCGTGAGAGTACAAGTAATATAACTCGCC...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR-3UTR CAA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATTCTGCTTCCTTGCTTTaGCTCATGTGTTTTTCATCT +
Preference number: 3 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNSASLL*LMCFSS
Trigger: AGATGAAAAACACATGAGCAAAAGCAAGGAAGCAGA...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR TCA 72 bp CTCATGTGTTTTTCATCTCACTGTCTGTCCTGCCATTaGCTACAACCCAAAGCCTCAGAGGCACAGAACTTT +
Preference number: 3 (lower is better)
Translates to: LMCFSSHCLSCH*LQPKASEAQNF
Trigger: AAAGTTCTGTGCCTCTGAGGCTTTGGGTTGTAGTCAATGGCAGGACAGACAGTGAGATGAAAAACACATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp TTCCAACTTCAGGCTCTATATTGGGGTGGCACTTCCTaGAAGATGGCGAGTTATATTACTTGTACTCTCACG +
Preference number: 3 (lower is better)
Translates to: FQLQALYWGGTS*KMASYITCTLT
Trigger: CGTGAGAGTACAAGTAATATAACTCGCCATCTTGCAGGAAGTGCCACCCCAATATAGAGCCTGAAGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 72 bp AAGGATCTCAACAGATTCCAACTTCAGGCTCTATATTaGGGTGGCACTTCCTGCAAGATGGCGAGTTATATT +
Preference number: 3 (lower is better)
Translates to: KDLNRFQLQALY*GGTSCKMASYI
Trigger: AATATAACTCGCCATCTTGCAGGAAGTGCCACCCCAATATAGAGCCTGAAGTTGGAATCTGTTGAGATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CCA 72 bp ACTGATATCACCCACCCACAACTTAGGAATCAACAGTaGGTCCCTAGATGTAAGCCTTTTCCAATTTGTGAC +
Preference number: 3 (lower is better)
Translates to: TDITHPQLRNQQ*VPRCKPFPICD
Trigger: GTCACAAATTGGAAAAGGCTTACATCTAGGGACCCACTGTTGATTCCTAAGTTGTGGGTGGGTGATATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR GCA 72 bp CAGCAGCTACTAACGTCCCTTTACGAGAGTCAAACATaGCTATTAATACAGTATATACAGACACCCCATTCT +
Preference number: 3 (lower is better)
Translates to: QQLLTSLYESQT*LLIQYIQTPHS
Trigger: AGAATGGGGTGTCTGTATATACTGTATTAATAGGCATGTTTGACTCTCGTAAAGGGACGTTAGTAGCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACCGGAACACCATCAGCTaGGGCGGCCGGGAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHRNTIS*GGREPR
Trigger: GCGGGGCTCCCGGCCGCCGCAGCTGATGGTGTTCCG...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612932.6
ENST00000665913.1
CDS-3UTR GCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACGGGGGCGGGGGAGGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHGGGGG*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAACCTCCCCCGCCCCC...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCAGAAGGACCCGCGAGTaGCCGGAGGGGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPRRTRE*PEGPGR
Trigger: CCTCCCGGGCCCCTCCGGCCACTCGCGGGTCCTTCT...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAAGAAGGACCCGCGAGTaGCCGGAGGGGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRRRTRE*PEGPGR
Trigger: CCTCCCGGGCCCCTCCGGCCACTCGCGGGTCCTTCT...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCTGCGGAGGGGGCGGCTaGGGAGGACACGGACACGGG +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPICGGGG*GGHGHG
Trigger: CCCGTGTCCGTGTCCTCCTCAGCCGCCCCCTCCGCA...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAGCCCATGACTGGCTCTaGACCGCCCAGGTGATGGGA +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPAHDWL*TAQVMG
Trigger: TCCCATCACCTGGGCGGTTCAGAGCCAGTCATGGGC...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAATCAGGGCCTGGGGGCTaGAGCAGAAGCCGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKSGPGG*SRSRPP
Trigger: GGGCGGCCGGCTTCTGCTGCAGCCCCCAGGCCCTGA...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGCCCGCCGTGGCTGGCTaGTTTCTGTCTGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLPAVAG*FLSAPP
Trigger: TGGAGGGGCAGACAGAAAGCAGCCAGCCACGGCGGG...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGGAGTTGGAGGGTGTaGAGAGGTCAGGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLGSWRV*RGQAPL
Trigger: CAGCGGGGCCTGACCTCTCCACACCCTCCAACTCCC...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCACCGGGGAAATGCATCTaGGGCATGGGGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPPGKCI*GMGWRR
Trigger: CCTCCTCCACCCCATGCCCCAGATGCATTTCCCCGG...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACGGGGTGGGTGTGAGGTaGAGCCCCACGCAGAGTACG +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHGVGVR*SPTQST
Trigger: CGTACTCTGCGTGGGGCTCCACCTCACACCCACCCC...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGAGCCAGGCCACGCTTTaGCTTGGAGGAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ADHSEALAMGRSLADSFGSQATL*LGGGQR
Trigger: CCTCTGCCCTCCTCCAAGCCAAAGCGTGGCCTGGCT...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCTGCGGAGGGGGCGGCTaGGGAGGACACGGACACGGG +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSCGGGG*GGHGHG
Trigger: CCCGTGTCCGTGTCCTCCTCAGCCGCCCCCTCCGCA...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCGCGACCCGGGCTGCTaGGCTCCTCTTCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIRDPGC*APLPSS
Trigger: GCTGCTCGGAAGAGGAGCTCAGCAGCCCGGGTCGCG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCTCCAGGGCACAGCGGTaGCGGGGACACAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPSRAQR*RGHSSS
Trigger: GGAACTGCTGTGTCCCCGGCACCGCTGTGCCCTGGA...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACCCCAGAGCCGCCAACTaGGCCTCTAGTCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNPRAAN*ASSPAA
Trigger: GGCGGCTGGACTAGAGGCGCAGTTGGCGGCTCTGGG...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGTCAGGGCCTGGGGGCTaGAGCAGAAGCCGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVSGPGG*SRSRPP
Trigger: GGGCGGCCGGCTTCTGCTGCAGCCCCCAGGCCCTGA...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGGGGGCGGGGGAGGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKGGGGG*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAACCTCCCCCGCCCCC...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCCCCGCCGTGGCTGGCTaGTTTCTGTCTGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPPAVAG*FLSAPP
Trigger: TGGAGGGGCAGACAGAAAGCAGCCAGCCACGGCGGG...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGCCGGCGGCAGGGCCTTaGGGTCCAGGGCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVPAAGP*GPGHSG
Trigger: ACCGCTGTGCCCTGGACCCCAAGGCCCTGCCGCCGG...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCGGGAGTTGGAGGGTGTaGAGAGGTCAGGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPGSWRV*RGQAPL
Trigger: CAGCGGGGCCTGACCTCTCCACACCCTCCAACTCCC...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAACACTGGAGGTGCTGTaGGGGTTGGCTGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPTLEVL*GLAVQG
Trigger: TCCCTGCACAGCCAACCCCCACAGCACCTCCAGTGT...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCATTGGCACCAGCTGAATaGCCGTCCCCTGTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPLAPAE*PSPVPS
Trigger: GGAGGGAACAGGGGACGGCCATTCAGCTGGTGCCAA...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAGTGAGGCCCTGGCAATaGGCAGGAGCCTTGCTGACT +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPVRPWQ*AGALLT
Trigger: AGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCAC...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCGGCTGCGGCCAGGGCTaGGACCAGTGCACTGACACA +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPGCGQG*DQCTDT
Trigger: TGTGTCAGTGCACTGGTCCCAGCCCTGGCCGCAGCC...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAGGCTGCGGCCAGGGCTaGGACCAGTGCACTGACACA +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRGCGQG*DQCTDT
Trigger: TGTGTCAGTGCACTGGTCCCAGCCCTGGCCGCAGCC...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGAGCCAGGCCACGCTTTaGCTTGGAGGAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLSQATL*LGGGQR
Trigger: CCTCTGCCCTCCTCCAAGCCAAAGCGTGGCCTGGCT...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CAA 72 bp GAAGGGGAAGGAGCAGGAGCCATGCAGGAGTTTCCTTaGGCCACACCTTTCTCCTCAGGGAGGTGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: EGEGAGAMQEFP*ATPFSSGRWRH
Trigger: GTGGCGCCACCTCCCTGAGGAGAAAGGTGTGGCCAAAGGAAACTCCTGCATGGCTCCTGCTCCTTCCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACTGTCAGGCTCGCAGCTaGAGCAGCCAGCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHCQARS*SSQLSR
Trigger: TCTGGAGAGCTGGCTGCTTCAGCTGCGAGCCTGACA...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGATCTCCCCGCTCCTCCTaGAAGCAGGGACAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRSPRSS*KQGQAA
Trigger: AGCTGCCTGTCCCTGCTTTCAGGAGGAGCGGGGAGA...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGCTCCCTCACATGGCCTaGGCTGACCATAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLLPHMA*ADHSEA
Trigger: GGCCTCACTATGGTCAGCTCAGGCCATGTGAGGGAG...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCAGAGGGACCAAGTCCTaGAGCGGGAAGGGCACCGGA +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPRGTKS*SGKGTG
Trigger: TCCGGTGCCCTTCCCGCTGCAGGACTTGGTCCCTCT...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACTGCTGCTGCTGCTGCTaGTGCTCCCCTCTACTCAGG +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHCCCCC*CSPLLR
Trigger: CCTGAGTAGAGGGGAGCAGCAGCAGCAGCAGCAGCA...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAGTGCAGGGATTCAGCTaGTCGGATGGGAGCAATCCG +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPVQGFS*SDGSNP
Trigger: CGGATTGCTCCCATCCGAGCAGCTGAATCCCTGCAC...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACCCTCCAGTCCTAAGATaGCCAGGGGTGGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHPPVLR*PGVGVR
Trigger: CCTCACACCCACCCCTGGGCATCTTAGGACTGGAGG...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGCCCCTAACTGCTCTGTaGAAGGCCACCCATGCAGGC +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLPLTAL*KATHAG
Trigger: GCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGG...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACCCCCTAACTGCTCTGTaGAAGGCCACCCATGCAGGC +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHPLTAL*KATHAG
Trigger: GCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGG...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCATGGCTGCTTTCTGTCTaGCCCTCCAGGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPWLLSV*PSRPLG
Trigger: ACCAAGAGGCCTGGAGGGGCAGACAGAAAGCAGCCA...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGCTGGACAGGAGTTGGTaGCAGTCCTGGAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: ADHSEALAMGRSLADSFGLDRSW*QSWNPG
Trigger: TCCAGGGTTCCAGGACTGCCACCAACTCCTGTCCAG...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGTTCTCCTCAGGGAGGTaGCGCCACCTCCATGGCTCA +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLFSSGR*RHLHGS
Trigger: TGAGCCATGGAGGTGGCGCCACCTCCCTGAGGAGAA...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGTTCCCGGGAGGTAGATaGGAGTGGGACGGGATAGCA +
Preference number: 4 (lower is better)
Translates to: ADHSEALAMGRSLADSFGFPGGR*EWDGIA
Trigger: TGCTATCCCGTCCCACTCCCATCTACCTCCCGGGAA...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCTCTTCCCGCCGTGGCTaGCTGCTTTCTGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPSSRRG*LLSVCP
Trigger: GGGGCAGACAGAAAGCAGCCAGCCACGGCGGGAAGA...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGCATGTCTTCCCGCCGTaGCTGGCTGCTTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ADHSEALAMGRSLADSFGHVFPP*LAAFCL
Trigger: CAGACAGAAAGCAGCCAGCCACGGCGGGAAGACATG...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAGTGGGTGATACCCTGTaGTCGGAAACTGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPVGDTL*SETEAQ
Trigger: CTGAGCCTCAGTTTCCGATCACAGGGTATCACCCAC...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACGCCTTTGGCACCAGCTaGATGGCCGTCCCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNAFGTS*MAVPCS
Trigger: GGAACAGGGGACGGCCATTCAGCTGGTGCCAAAGGC...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGTCTGAACCGCCCAGGTaGTGGGAAACACGATTGCCA +
Preference number: 4 (lower is better)
Translates to: ADHSEALAMGRSLADSFGSEPPR*WETRLP
Trigger: TGGCAATCGTGTTTCCCATCACCTGGGCGGTTCAGA...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGCCTAAGGAAATCCCGTaGGGGCTGCGTTCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLPKEIP*GLRSES
Trigger: GCTCTCAGAACGCAGCCCTCACGGGATTTCCTTAGG...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACGGGCAGGAGCCTTGCTaGCTCCTTTGGGCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNGQEPC*LLWALG
Trigger: GCCCAAAGCCCAAAGGAGTCAGCAAGGCTCCTGCCC...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACGAGAAAGGTGGGTGGTaGGGTTGGGTCACACCTCCT +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHEKGGW*GWVTPP
Trigger: AGGAGGTGTGACCCAACCTCACCACCCACCTTTCTC...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGACCCCGAGCCCAGAATaGCACCCCTCTTCATCGAGT +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLTPSPE*HPSSSS
Trigger: ACTCGATGAAGAGGGGTGTCATTCTGGGCTCGGGGT...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCCCCAGAGCCGCCAACTaGGCCTCTAGTCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSPRAAN*ASSPAA
Trigger: GGCGGCTGGACTAGAGGCGCAGTTGGCGGCTCTGGG...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCTCCAGAAGGCCTCTTaGCGGTCCCATCCCCACCGC +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPILQKAS*RSHPHR
Trigger: GCGGTGGGGATGGGACCGGCAAGAGGCCTTCTGGAG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACAGGGGACACTGGAGGTaGTGTGGGGGTTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNRGHWR*CGGWLC
Trigger: GCACAGCCAACCCCCACAGCACCTCCAGTGTCCCCT...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCACAGGGCTGGGACCAGTaGACTGACACAGACACAGTT +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPQGWDQ*TDTDTV
Trigger: AACTGTGTCTGTGTCAGTGCACTGGTCCCAGCCCTG...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGTGGCTGCTTTCTGTCTaGCCCTCCAGGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLWLLSV*PSRPLG
Trigger: ACCAAGAGGCCTGGAGGGGCAGACAGAAAGCAGCCA...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCAGGAGGAGGGGGAGTTaGAGGGTGTGGAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPRRRGS*RVWRGQ
Trigger: CTGACCTCTCCACACCCTCCAACTCCCCCTCCTCCT...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCACACTGGAGGTGCTGTaGGGGTTGGCTGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPTLEVL*GLAVQG
Trigger: TCCCTGCACAGCCAACCCCCACAGCACCTCCAGTGT...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCGGGGTGGGTGTGAGGTaGAGCCCCACGCAGAGTACG +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIGVGVR*SPTQST
Trigger: CGTACTCTGCGTGGGGCTCCACCTCACACCCACCCC...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACTTCCCGGGAGGTAGATaGGAGTGGGACGGGATAGCA +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHFPGGR*EWDGIA
Trigger: TGCTATCCCGTCCCACTCCCATCTACCTCCCGGGAA...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCTGCGGAGGGGGCGGCTaGGGAGGACACGGACACGGG +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESCGGGG*GGHGHG
Trigger: CCCGTGTCCGTGTCCTCCTCAGCCGCCCCCTCCGCA...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTTGCGGAGGGGGCGGCTaGGGAGGACACGGACACGGG +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGCGGGG*GGHGHG
Trigger: CCCGTGTCCGTGTCCTCCTCAGCCGCCCCCTCCGCA...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGTGGGTGATACCCTGTaGTCGGAAACTGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLVGDTL*SETEAQ
Trigger: CTGAGCCTCAGTTTCCGATCACAGGGTATCACCCAC...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGACAAGGGGCAATGGGTTaGGAGCAGAGGAAGAACGGG +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRQGAMG*EQRKNG
Trigger: CCCGTTCTTCCTCTGCTCTCAACCCATTGCCCCTTG...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGAAATTCAGCAGCCCATaGCTGGCTCTGAACCGCCCA +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLKFSSP*LALNRP
Trigger: TGGGCGGTTCAGAGCCAGTCATGGGCTGCTGAATTT...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGCCAAACACCCACACCTaGCGAAGACTGTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ADHSEALAMGRSLADSFGPNTHT*RRLSPL
Trigger: AAGAGGAGACAGTCTTCGTCAGGTGTGGGTGTTTGG...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACACCCTGGGGTGAGGGCTaGCACGGCTGGATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTPWGEG*HGWIPG
Trigger: CCCTGGAATCCAGCCGTGTCAGCCCTCACCCCAGGG...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAGAAACAGGAAGAAACTaGGCGACACCTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPETGRN*ATPARK
Trigger: CTTCCTGGCAGGTGTCGCTCAGTTTCTTCCTGTTTC...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGCCCAGAGCCGCCAACTaGGCCTCTAGTCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKPRAAN*ASSPAA
Trigger: GGCGGCTGGACTAGAGGCGCAGTTGGCGGCTCTGGG...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACTGTGGGGGTTGGCTGTaGAGGGATTCAGCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNCGGWL*RDSAAR
Trigger: CCGAGCAGCTGAATCCCTGCACAGCCAACCCCCACA...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGAGGGGACACTGGAGGTaGTGTGGGGGTTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKRGHWR*CGGWLC
Trigger: GCACAGCCAACCCCCACAGCACCTCCAGTGTCCCCT...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACTCCAAGCCCCAGGGCTaGGTGGGGAACCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNSKPQG*VGNQSL
Trigger: GAGACTTTGGTTCCCCACGCAGCCCTGGGGCTTGGA...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACCCTCCAGTCCTAAGATaGCCAGGGGTGGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNPPVLR*PGVGVR
Trigger: CCTCACACCCACCCCTGGGCATCTTAGGACTGGAGG...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAGAACTCCCAGTCCTTTaGAAACCTCAAGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPELPVL*KPQAPP
Trigger: AGGAGGGGCTTGAGGTTTGCAAAGGACTGGGAGTTC...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGTGTCTCCTCTTGCGCTaGTGTTTTGCAGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLCLLLR*CFAAHS
Trigger: GGAGTGGGCTGCAAAACAGCAGCGCAAGAGGAGACA...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACTGTCTCCTCTTGCGCTaGTGTTTTGCAGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHCLLLR*CFAAHS
Trigger: GGAGTGGGCTGCAAAACAGCAGCGCAAGAGGAGACA...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACCCCCTAACTGCTCTGTaGAAGGCCACCCATGCAGGC +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNPLTAL*KATHAG
Trigger: GCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGG...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGCCCGCCTACTCCTGTaGTACCAACATAGCACACGA +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLARLLL*YQHSTR
Trigger: TCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAAAGGAGCAGGAGCCATaGAGGAGTTTCCTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPKEQEP*RSFLWP
Trigger: TGGCCAAAGGAAACTCCTGCATGGCTCCTGCTCCTT...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGACAGTGGAAAACAAATaGCAGGTCTCCGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ADHSEALAMGRSLADSFGTVENK*QVSAQW
Trigger: CCACTGGGCGGAGACCTGGCATTTGTTTTCCACTGT...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGCGGAGCTCGGCCTCCTaGATCGGGGAGAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKRSSAS*IGEREG
Trigger: TCCCTCCCTCTCCCCGATGCAGGAGGCCGAGCTCCG...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612932.6
CDS-3UTR CCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTCCGGCGGCAGGGCCTTaGGGTCCAGGGCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGPAAGP*GPGHSG
Trigger: ACCGCTGTGCCCTGGACCCCAAGGCCCTGCCGCCGG...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCCGGCGGCAGGGCCTTaGGGTCCAGGGCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGPAAGP*GPGHSG
Trigger: ACCGCTGTGCCCTGGACCCCAAGGCCCTGCCGCCGG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTAGAAGGACCCGCGAGTaGCCGGAGGGGCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGRRTRE*PEGPGR
Trigger: CCTCCCGGGCCCCTCCGGCCACTCGCGGGTCCTTCT...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCAGGTGCTGTGGGGGTTaGCTGTGCAGGGATTCAGCT +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPRCCGG*LCRDSA
Trigger: AGCTGAATCCCTGCACAGCCAACCCCCACAGCACCT...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGACAGCTGGACAGGAGTTaGTGGCAGTCCTGGAACCCT +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRQLDRS*WQSWNP
Trigger: AGGGTTCCAGGACTGCCACCAACTCCTGTCCAGCTG...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCCAGCTGGACAGGAGTTaGTGGCAGTCCTGGAACCCT +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPQLDRS*WQSWNP
Trigger: AGGGTTCCAGGACTGCCACCAACTCCTGTCCAGCTG...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGCACAGCTCATCTTGTaGGCCACCCTTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLAQLIL*ATLPQS
Trigger: TGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGC...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAACCATAGTGAGGCCCTaGCAATGGGCAGGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRTIVRP*QWAGAL
Trigger: CAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGT...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGAAAGGTCAGCACCAATaGTCCCAAAGAGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: ADHSEALAMGRSLADSFGKGQHQ*SQRAGC
Trigger: GCAACCGGCTCTTTGGGACCATTGGTGCTGACCTTT...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACTTCTCCTCAGGGAGGTaGCGCCACCTCCATGGCTCA +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNFSSGR*RHLHGS
Trigger: TGAGCCATGGAGGTGGCGCCACCTCCCTGAGGAGAA...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCGGAGGTAGATGGGAGTaGGACGGGATAGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPGGRWE*DGIAGV
Trigger: CACACCTGCTATCCCGTCCCACTCCCATCTACCTCC...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACCTGAGCGGGGCAGTGTaGTATGTGATGATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHLSGAV*YVMIPE
Trigger: CTCTGGGATCATCACATACCACACTGCCCCGCTCAG...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGACCCTACCTGTCCCTTaGACAGGTTCTGGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLTLPVP*TGSGPK
Trigger: CTTAGGCCCAGAACCTGTCCAAGGGACAGGTAGGGT...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCACCCAAAGTGGCACCTaGACCCTACCTGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPTQSGT*TLPVPW
Trigger: CCAAGGGACAGGTAGGGTCCAGGTGCCACTTTGGGT...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAATGTCAGGCTCGCAGCTaGAGCAGCCAGCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKCQARS*SSQLSR
Trigger: TCTGGAGAGCTGGCTGCTTCAGCTGCGAGCCTGACA...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACGGGAGATCTGGGATGTaGTCTATCCTGACGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHGRSGM*SILTSC
Trigger: ACAGCTCGTCAGGATAGATCACATCCCAGATCTCCC...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCGTGAGGGCTGCGTTCTaGGAGCTTCCTCTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPVRAAF*ELPLGR
Trigger: TCTTCCTAGAGGAAGCTCTCAGAACGCAGCCCTCAC...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAACTCCCTCACATGGCCTaGGCTGACCATAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKLPHMA*ADHSEA
Trigger: GGCCTCACTATGGTCAGCTCAGGCCATGTGAGGGAG...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGCTGGGACCAGTGCACTaGCACAGACACAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLLGPVH*HRHSST
Trigger: TGTTGAACTGTGTCTGTGTCAGTGCACTGGTCCCAG...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGAACTCCCGACCTCATaGTCCACCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKELPTS*STHLSL
Trigger: GAGGCTGAGGTGGGTGGATCATGAGGTCGGGAGTTC...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGTGAAGGCTCCAATGTaGAAGCAGGGTCTACCACAG +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLVKAPM*KQGLPQ
Trigger: CTGTGGTAGACCCTGCTTTCACATTGGAGCCTTCAC...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGTCCAGGGCACAGCGGTaGCGGGGACACAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKSRAQR*RGHSSS
Trigger: GGAACTGCTGTGTCCCCGGCACCGCTGTGCCCTGGA...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACATCCAGGGCACAGCGGTaGCGGGGACACAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTSRAQR*RGHSSS
Trigger: GGAACTGCTGTGTCCCCGGCACCGCTGTGCCCTGGA...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGGGGCGGGGGAGGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGGGGGG*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAACCTCCCCCGCCCCC...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGCTCCAGAAGGCCTCTTaGCGGTCCCATCCCCACCGC +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKLQKAS*RSHPHR
Trigger: GCGGTGGGGATGGGACCGGCAAGAGGCCTTCTGGAG...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGACAGAGTACGGTCATGTaGTTCTTCCAAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRQSTVM*FFQAPG
Trigger: CCCTGGGGCTTGGAAGAAGCACATGACCGTACTCTG...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCCCCTCCTTTCTCTCCTaGTCCTACAACAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPPSFLS*SYNSCP
Trigger: TGGGCAGCTGTTGTAGGAGCAGGAGAGAAAGGAGGG...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGACAGGGCTGGGACCAGTaGACTGACACAGACACAGTT +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRQGWDQ*TDTDTV
Trigger: AACTGTGTCTGTGTCAGTGCACTGGTCCCAGCCCTG...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACAAGACTGTCTCCTCTTaGGCTGCTGTTTTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHKTVSS*AAVLQP
Trigger: GGGCTGCAAAACAGCAGCGCAAGAGGAGACAGTCTT...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGTCATCTTCCCCTAACTaGTCTGTGCAAGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLSSSPN*SVQGHP
Trigger: TGGGTGGCCTTGCACAGAGCAGTTAGGGGAAGATGA...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCCTCGCCCCAGTTTCTaGAGGGAGCAGAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIPRPSF*REQRAS
Trigger: TGAAGCCCTCTGCTCCCTGCAGAAACTGGGGCGAGG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCAGCTGCAACCAAACATaGATGTCTTCCCGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPSCNQT*MSSRRG
Trigger: GCCACGGCGGGAAGACATGCATGTTTGGTTGCAGCT...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGCCGGCGGCAGGGCCTTaGGGTCCAGGGCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKPAAGP*GPGHSG
Trigger: ACCGCTGTGCCCTGGACCCCAAGGCCCTGCCGCCGG...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACCGTCGCTCGTTTCCGTaGGGTCCTCCCCGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDRRSFP*GPPRPA
Trigger: CGCAGGCCGGGGAGGACCCCACGGAAACGAGCGACG...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTGGGAGTTGGAGGGTGTaGAGAGGTCAGGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFGSWRV*RGQAPL
Trigger: CAGCGGGGCCTGACCTCTCCACACCCTCCAACTCCC...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGACACTGGAGGTGCTGTaGGGGTTGGCTGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKTLEVL*GLAVQG
Trigger: TCCCTGCACAGCCAACCCCCACAGCACCTCCAGTGT...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCCCAACTCTCGAAGGCTaGCTGCAAAGCTGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPPTLEG*LQSCSS
Trigger: ACTCGAGCAGCTTTGCAGCCAGCCTTCGAGAGTTGG...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACCTGGACAGGAGTTGGTaGCAGTCCTGGAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNLDRSW*QSWNPG
Trigger: TCCAGGGTTCCAGGACTGCCACCAACTCCTGTCCAG...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCACAGAGGTTTAGGCAGTaGGAGATCTGGGATGTGATC +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPQRFRQ*EIWDVI
Trigger: GATCACATCCCAGATCTCCCACTGCCTAAACCTCTG...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAGCACAGCTCATCTTGTaGGCCACCCTTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRAQLIL*ATLPQS
Trigger: TGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGC...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAGGTGGGCTGTGTTTATaGTGCACAGCTCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPGGLCL*CTAHLV
Trigger: CACAAGATGAGCTGTGCACCATAAACACAGCCCACC...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGATCTGCCTCCCTCACATaGCCTGAGCTGACCATAGTG +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRSASLT*PELTIV
Trigger: CACTATGGTCAGCTCAGGCCATGTGAGGGAGGCAGA...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTGGCTGCGGCCAGGGCTaGGACCAGTGCACTGACACA +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFGCGQG*DQCTDT
Trigger: TGTGTCAGTGCACTGGTCCCAGCCCTGGCCGCAGCC...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGAGCTCTGCACAGCACTaGCGAAGGAGGGACGGGCCT +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVSSAQH*RRRDGP
Trigger: AGGCCCGTCCCTCCTTCGCCAGTGCTGTGCAGAGCT...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACAAAGGTCAGCACCAATaGTCCCAAAGAGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHKGQHQ*SQRAGC
Trigger: GCAACCGGCTCTTTGGGACCATTGGTGCTGACCTTT...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCGTGGCGCCACCTCCATaGCTCAGGTTCCAAGATGTA +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPVAPPP*LRFQDV
Trigger: TACATCTTGGAACCTGAGCCATGGAGGTGGCGCCAC...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAAGGGAGCACCAGAGATaGAGGAGTGAGAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRREHQR*RSESRL
Trigger: AAGCCTGCTCTCACTCCTCCATCTCTGGTGCTCCCT...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCAGGGAGCACCAGAGATaGAGGAGTGAGAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPREHQR*RSESRL
Trigger: AAGCCTGCTCTCACTCCTCCATCTCTGGTGCTCCCT...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGAGCCAGGCCACGCTTTaGCTTGGAGGAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVSQATL*LGGGQR
Trigger: CCTCTGCCCTCCTCCAAGCCAAAGCGTGGCCTGGCT...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CAA 72 bp AGGCAAAGGTCAGCACCAATGGTCCCAAAGAGCCGGTaGCCACCCACTTACCTAGTGCCCACACCAAAACCC +
Preference number: 4 (lower is better)
Translates to: RQRSAPMVPKSR*PPTYLVPTPKP
Trigger: GGGTTTTGGTGTGGGCACTAGGTAAGTGGGTGGCAACCGGCTCTTTGGGACCATTGGTGCTGACCTTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCTATCATCTAGGAGGCTaGGGCTTCTTCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPYHLGG*GFFSEE
Trigger: CTCCTCCGAGAAGAAGCCTCAGCCTCCTAGATGATA...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCCCTGTGATCGGAAACTaGGGCTCAGGATGTAACGAG +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPPVIGN*GSGCNE
Trigger: CTCGTTACATCCTGAGCCTCAGTTTCCGATCACAGG...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCGATGACACCACAGGCTaGAGGTTCCTCTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPDDTTG*RFLCSA
Trigger: AGCACTACAGAGGAACCTTCAGCCTGTGGTGTCATC...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAGCTTCTGTTTGGAAATaGGCTGCGCTTCCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPASVWK*AALPLE
Trigger: CTCTAAAGGAAGCGCAGCTCATTTCCAAACAGAAGC...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACAAATTCAGCAGCCCATaGCTGGCTCTGAACCGCCCA +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNKFSSP*LALNRP
Trigger: TGGGCGGTTCAGAGCCAGTCATGGGCTGCTGAATTT...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGTCTCCCCGCTCCTCCTaGAAGCAGGGACAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKSPRSS*KQGQAA
Trigger: AGCTGCCTGTCCCTGCTTTCAGGAGGAGCGGGGAGA...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAACTCACAATGTCATATaGATTGGCCATGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPTHNVI*IGHGQL
Trigger: CAGCTGGCCATGGCCAATTCATATGACATTGTGAGT...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGGGCAATGCTCCCAGATaGGGCAGTCCTATAAATTAC +
Preference number: 4 (lower is better)
Translates to: ADHSEALAMGRSLADSFGGNAPR*GSPINY
Trigger: GTAATTTATAGGACTGCCTCATCTGGGAGCATTGCC...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACCCCTGGGGTGAGGGCTaGCACGGCTGGATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDPWGEG*HGWIPG
Trigger: CCCTGGAATCCAGCCGTGTCAGCCCTCACCCCAGGG...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACCCCAGAGCCGCCAACTaGGCCTCTAGTCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDPRAAN*ASSPAA
Trigger: GGCGGCTGGACTAGAGGCGCAGTTGGCGGCTCTGGG...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGAGAGGGACCAAGTCCTaGAGCGGGAAGGGCACCGGA +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKRGTKS*SGKGTG
Trigger: TCCGGTGCCCTTCCCGCTGCAGGACTTGGTCCCTCT...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCCGCCGGAGCCACCGTTaGAGCTCTTGGTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSRRSHR*SSWCER
Trigger: TCTTTCGCACCAAGAGCTGCAACGGTGGCTCCGGCG...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCTCTCGAAGGCTGGCTaGAAAGCTGCTCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPILSKAG*KAARVR
Trigger: CCTGACTCGAGCAGCTTTGCAGCCAGCCTTCGAGAG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAGAGGGTTCCACCTCTTaGTTCTGTTTGGAAATGAGC +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPEGSTS*FCLEMS
Trigger: GCTCATTTCCAAACAGAAGCAAGAGGTGGAACCCTC...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGTGGGGTGGCACTTCCTaGAAGATGGCGAGTTATATT +
Preference number: 4 (lower is better)
Translates to: ADHSEALAMGRSLADSFGWGGTS*KMASYI
Trigger: AATATAACTCGCCATCTTGCAGGAAGTGCCACCCCA...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCCTTGCGCTGCTGTTTTaGAGCCCACTCCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPLALLF*SPLHRE
Trigger: TTCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAAG...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGATCATCTTCCCCTAACTaGTCTGTGCAAGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRSSSPN*SVQGHP
Trigger: TGGGTGGCCTTGCACAGAGCAGTTAGGGGAAGATGA...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACTCTACCACAGGGACGTaGAGACTTGACCTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHSTTGT*RLDLCD
Trigger: GTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGA...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGCAACCCCCATTTCACTaGTCCCAAGACTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLQPPFH*SQDFAL
Trigger: GAGAGCAAAGTCTTGGGAGCAGTGAAATGGGGGTTG...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACCGCTACTTTCCTAACTaGAGTACCCGAGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNRYFPN*STRVPS
Trigger: GCTGGGGACTCGGGTACTGCAGTTAGGAAAGTAGCG...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCAGGCCTCTTGGTGTTaGAGAGGAGGGGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIQASWC*RGGGRR
Trigger: TCTCCTACCCCCTCCTCTGCAACACCAAGAGGCCTG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACAGCTGCAACCAAACATaGATGTCTTCCCGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNSCNQT*MSSRRG
Trigger: GCCACGGCGGGAAGACATGCATGTTTGGTTGCAGCT...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCGAGTTCTTGTCAACTTaGGTTTCCTCCCCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPEFLST*VSSPRP
Trigger: TGGACGCGGGGAGGAAACCCAAGTTGACAAGAACTC...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCATTCAGCTGCTCGGATaGGAGCAATCCGGGGAAATG +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPIQLLG*EQSGEM
Trigger: CATTTCCCCGGATTGCTCCCATCCGAGCAGCTGAAT...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACCAGAGGTTTAGGCAGTaGGAGATCTGGGATGTGATC +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHQRFRQ*EIWDVI
Trigger: GATCACATCCCAGATCTCCCACTGCCTAAACCTCTG...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGTGGGCTGTGTTTATaGTGCACAGCTCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLGGLCL*CTAHLV
Trigger: CACAAGATGAGCTGTGCACCATAAACACAGCCCACC...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCCAGGAGGAGAAAGGTaGGTGGTGAGGTTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIPGGER*VVRLGH
Trigger: GTGACCCAACCTCACCACCCACCTTTCTCCTCCTGG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACAGCAGTAGTTGTCACTaGCTCACAGCAGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHSSSCH*LTAAHS
Trigger: AGAGTGAGCTGCTGTGAGCCAGTGACAACTACTGCT...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGATGTAACATTCACTTaGCCTAGGCACAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLDVTFT*PRHRQV
Trigger: CACCTGCCTGTGCCTAGGCCAAGTGAATGTTACATC...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCGGAGGTAGATGGGAGTaGGACGGGATAGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIGGRWE*DGIAGV
Trigger: CACACCTGCTATCCCGTCCCACTCCCATCTACCTCC...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTCCCCTCCAGGCCTCTTaGTGTTGCAGAGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFPLQAS*CCRGGG
Trigger: ACCCCCTCCTCTGCAACACCAAGAGGCCTGGAGGGG...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAACTGCTCCACCTGAGCTaGTTAGGGAGCTCAGGACGA +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKLLHLS*LGSSGR
Trigger: TCGTCCTGAGCTCCCTAACCAGCTCAGGTGGAGCAG...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGACCCAAAGTGGCACCTaGACCCTACCTGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKTQSGT*TLPVPW
Trigger: CCAAGGGACAGGTAGGGTCCAGGTGCCACTTTGGGT...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGGAGGTCAGGCCCCGCTaGGAAATGTCCACATCCACA +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVEVRPR*EMSTST
Trigger: TGTGGATGTGGACATTTCTCAGCGGGGCCTGACCTC...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCGAGGTCAGGCCCCGCTaGGAAATGTCCACATCCACA +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSEVRPR*EMSTST
Trigger: TGTGGATGTGGACATTTCTCAGCGGGGCCTGACCTC...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCTCCTCAAACTTGGGATaGCACCACAGGCTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPSSNLG*HHRLKV
Trigger: AACCTTCAGCCTGTGGTGTCATCCCAAGTTTGAGGA...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGCTAGTACAGCTTCCATaGGAGGTGTTTCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: ADHSEALAMGRSLADSFGLVQLP*EVFLNS
Trigger: TGAGTTCAGAAACACCTCTCATGGAAGCTGTACTAG...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGCTCACTCCTAAGTCATaGGTACAGTTTGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: ADHSEALAMGRSLADSFGLTPKS*VQFAMK
Trigger: CTTCATGGCAAACTGTACTCATGACTTAGGAGTGAG...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGACTCACAATGTCATATaGATTGGCCATGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLTHNVI*IGHGQL
Trigger: CAGCTGGCCATGGCCAATTCATATGACATTGTGAGT...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAAGAAGAGGTACCACATaGCAAATCAGAGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRRRGTT*QIRGGL
Trigger: CAGCCCACCTCTGATTTGTCATGTGGTACCTCTTCT...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACCTGGGACCAGTGCACTaGCACAGACACAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNLGPVH*HRHSST
Trigger: TGTTGAACTGTGTCTGTGTCAGTGCACTGGTCCCAG...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTCTAGGCACAGGCAGGTaGCCAGGCAAAGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFLGTGR*PGKGQH
Trigger: GTGCTGACCTTTGCCTGGTCACCTGCCTGTGCCTAG...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTCGCCGGAGCCACCGTTaGAGCTCTTGGTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFRRSHR*SSWCER
Trigger: TCTTTCGCACCAAGAGCTGCAACGGTGGCTCCGGCG...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCTCCAGAAGGCCTCTTaGCGGTCCCATCCCCACCGC +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGLQKAS*RSHPHR
Trigger: GCGGTGGGGATGGGACCGGCAAGAGGCCTTCTGGAG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACCTCCAGAAGGCCTCTTaGCGGTCCCATCCCCACCGC +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDLQKAS*RSHPHR
Trigger: GCGGTGGGGATGGGACCGGCAAGAGGCCTTCTGGAG...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGGTAGGGGGAAAGACTaGAAGGAAGACCCCATCGGA +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKGRGKD*KEDPIG
Trigger: TCCGATGGGGTCTTCCTTGCAGTCTTTCCCCCTACC...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTTCCAAGCCCCAGGGCTaGGTGGGGAACCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFSKPQG*VGNQSL
Trigger: GAGACTTTGGTTCCCCACGCAGCCCTGGGGCTTGGA...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGCCTCCAGTCCTAAGATaGCCAGGGGTGGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKPPVLR*PGVGVR
Trigger: CCTCACACCCACCCCTGGGCATCTTAGGACTGGAGG...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCCCCTTCTTTGGACCTaGTCACCCTTCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIPLLWT*SPFAPL
Trigger: AAGTGGTGCGAAGGGTGAGCAGGTCCAAAGAAGGGG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAACCCCTTCTTTGGACCTaGTCACCCTTCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKPLLWT*SPFAPL
Trigger: AAGTGGTGCGAAGGGTGAGCAGGTCCAAAGAAGGGG...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACAAATCCCGTGAGGGCTaGGTTCTGAGAGCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNKSREG*VLRASS
Trigger: AGAGGAAGCTCTCAGAACGCAGCCCTCACGGGATTT...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGCAATCTCGGCTCAGTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNAISAQ*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCACTGAGCCGAGATTGC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCTGTTACAGGGGTGTCTaGAGCTATCTCCACACCATC +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPCYRGV*SYLHTI
Trigger: GATGGTGTGGAGATAGCTGCAGACACCCCTGTAACA...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCGTCACAAACTCAGCATaGAGGGCTGGCTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSVTNSA*RAGFPG
Trigger: TCCCGGGAAGCCAGCCCTGCATGCTGAGTTTGTGAC...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGCAGGCCTCTTGGTGTTaGAGAGGAGGGGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVQASWC*RGGGRR
Trigger: TCTCCTACCCCCTCCTCTGCAACACCAAGAGGCCTG...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCGCGGCCGACCCACGTTaGGGAACACCATCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESAADPR*GTPSAA
Trigger: CGCAGCTGATGGTGTTCCGCAACGTGGGTCGGCCGC...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612932.6
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACGCGGCCGACCCACGTTaGGGAACACCATCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINAADPR*GTPSAA
Trigger: CGCAGCTGATGGTGTTCCGCAACGTGGGTCGGCCGC...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612932.6
ENST00000665913.1
CDS-3UTR CCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACGAGTTCTTGTCAACTTaGGTTTCCTCCCCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNEFLST*VSSPRP
Trigger: TGGACGCGGGGAGGAAACCCAAGTTGACAAGAACTC...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCGGGAGTTGGAGGGTGTaGAGAGGTCAGGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESGSWRV*RGQAPL
Trigger: CAGCGGGGCCTGACCTCTCCACACCCTCCAACTCCC...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCCAACTCTCGAAGGCTaGCTGCAAAGCTGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIPTLEG*LQSCSS
Trigger: ACTCGAGCAGCTTTGCAGCCAGCCTTCGAGAGTTGG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGAGCCCCTCGCTACGTaGAGGGTTCCACCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNEPLAT*RVPPLA
Trigger: AGCAAGAGGTGGAACCCTCCACGTAGCGAGGGGCTC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTAGCCCCAGGGCTGCGTaGGGAACCAAAGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFSPRAA*GTKVSA
Trigger: TGCAGAGACTTTGGTTCCCCACGCAGCCCTGGGGCT...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCCTCCCATCCCAGAAGTaGGATGGCAGTGATAAACCT +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPLPSQK*DGSDKP
Trigger: AGGTTTATCACTGCCATCCCACTTCTGGGATGGGAG...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAACTCAGGTCTGCCTGGTaGCTGGGAAGCTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKLRSAW*LGSFHL
Trigger: TAGATGGAAGCTTCCCAGCCACCAGGCAGACCTGAG...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCCCAGGAGGAGAAAGGTaGGTGGTGAGGTTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSPGGER*VVRLGH
Trigger: GTGACCCAACCTCACCACCCACCTTTCTCCTCCTGG...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCTGAGCGGGGCAGTGTaGTATGTGATGATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPILSGAV*YVMIPE
Trigger: CTCTGGGATCATCACATACCACACTGCCCCGCTCAG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGCAGGCAGCACCAGTGTaGGCATTCCAACAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVQAAPV*AFQQPA
Trigger: AGCTGGCTGTTGGAATGCCCACACTGGTGCTGCCTG...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CAA 72 bp TCAGAGGTGGGCTGTGTTTATGGTGCACAGCTCATCTaGTGGGCCACCCTTCCACAGTCAGGTAATGGTGCA +
Preference number: 4 (lower is better)
Translates to: SEVGCVYGAQLI*WATLPQSGNGA
Trigger: TGCACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAACACAGCCCACCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CAA 72 bp CACCAAACACCCACACCTGACGAAGACTGTCTCCTCTaGCGCTGCTGTTTTGCAGCCCACTCCACAGAGAAA +
Preference number: 4 (lower is better)
Translates to: HQTPTPDEDCLL*RCCFAAHSTEK
Trigger: TTTCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAAGAGGAGACAGTCTTCGTCAGGTGTGGGTGTTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGATGACACCACAGGCTaGAGGTTCCTCTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKDDTTG*RFLCSA
Trigger: AGCACTACAGAGGAACCTTCAGCCTGTGGTGTCATC...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCGATGACACCACAGGCTaGAGGTTCCTCTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIDDTTG*RFLCSA
Trigger: AGCACTACAGAGGAACCTTCAGCCTGTGGTGTCATC...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCGGATGTGATCTATCCTaGCGAGCTGTCGTATCCGGA +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIGCDLS*RAVVSG
Trigger: TCCGGATACGACAGCTCGTCAGGATAGATCACATCC...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGCCCATGACTGGCTCTaGACCGCCCAGGTGATGGGA +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGAHDWL*TAQVMG
Trigger: TCCCATCACCTGGGCGGTTCAGAGCCAGTCATGGGC...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGAGTACAGTTTGCCATaGAGAACCTGGAAACATGCT +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLEYSLP*RTWKHA
Trigger: AGCATGTTTCCAGGTTCTTCATGGCAAACTGTACTC...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACGAGTACAGTTTGCCATaGAGAACCTGGAAACATGCT +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHEYSLP*RTWKHA
Trigger: AGCATGTTTCCAGGTTCTTCATGGCAAACTGTACTC...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCTCTCCCCGCTCCTCCTaGAAGCAGGGACAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESSPRSS*KQGQAA
Trigger: AGCTGCCTGTCCCTGCTTTCAGGAGGAGCGGGGAGA...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAACACGCAAAGGAGTCATaGAGACCCAACAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKHAKES*RPNSST
Trigger: AGTGGAGCTGTTGGGTCTTCATGACTCCTTTGCGTG...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGGAGAAAGGTGGGTGGTaGGGTTGGGTCACACCTCCT +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKEKGGW*GWVTPP
Trigger: AGGAGGTGTGACCCAACCTCACCACCCACCTTTCTC...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGAGCTCCTCCCTTACATaGCAGGGGGTGTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKSSSLT*QGVCHS
Trigger: AGAATGACACACCCCCTGTCATGTAAGGGAGGAGCT...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGCAGCGCCTGTCTCTATaGTCCAACCCCCATTTCACT +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKQRLSL*SNPHFT
Trigger: AGTGAAATGGGGGTTGGATCATAGAGACAGGCGCTG...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGTCCAGGGCACAGCGGTaGCGGGGACACAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKSRAQR*RGHSSS
Trigger: GGAACTGCTGTGTCCCCGGCACCGCTGTGCCCTGGA...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATTCAGGGCCTGGGGGCTaGAGCAGAAGCCGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNSGPGG*SRSRPP
Trigger: GGGCGGCCGGCTTCTGCTGCAGCCCCCAGGCCCTGA...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGATCAGGGCCTGGGGGCTaGAGCAGAAGCCGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGSGPGG*SRSRPP
Trigger: GGGCGGCCGGCTTCTGCTGCAGCCCCCAGGCCCTGA...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTGTGCAGGGATTCAGCTaGTCGGATGGGAGCAATCCG +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFVQGFS*SDGSNP
Trigger: CGGATTGCTCCCATCCGAGCAGCTGAATCCCTGCAC...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACAGGGGACACTGGAGGTaGTGTGGGGGTTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDRGHWR*CGGWLC
Trigger: GCACAGCCAACCCCCACAGCACCTCCAGTGTCCCCT...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCCGGAATCTGCAAAGGTaGTGGAGGGATTTGACATTG +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPRNLQR*WRDLTL
Trigger: CAATGTCAAATCCCTCCAGCACCTTTGCAGATTCCG...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCGAGGGTTCCACCTCTTaGTTCTGTTTGGAAATGAGC +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPEGSTS*FCLEMS
Trigger: GCTCATTTCCAAACAGAAGCAAGAGGTGGAACCCTC...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCGGGAACCAAAGTCTCTaGACAGAGAATCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPGNQSL*TENPNL
Trigger: AAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCC...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGTGCTCCTACAACAGCTaGCCATGGCAACAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKCSYNS*PWQQEA
Trigger: TGCCTCTTGTTGCCATGGGCAGCTGTTGTAGGAGCA...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCAAATACAGAAGCCCTTaGTACCTCCCATCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPKYRSP*YLPSQK
Trigger: CTTCTGGGATGGGAGGTAGCAAGGGCTTCTGTATTT...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAAAATACAGAAGCCCTTaGTACCTCCCATCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRKYRSP*YLPSQK
Trigger: CTTCTGGGATGGGAGGTAGCAAGGGCTTCTGTATTT...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACGTTCAGTACATGCCATaGAGATTTCTGCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHVQYMP*RFLLPC
Trigger: GCAAGGAAGCAGAAATCTGCATGGCATGTACTGAAC...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGCACTGTTCAGTACATaGCATGCAGATTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLALFST*HADFCF
Trigger: GAAGCAGAAATCTGCATGGCATGTACTGAACAGTGC...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGAGAAAGGACTAGGCTaGGGCCAGGGCTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGEKGLG*GQGWDQ
Trigger: CTGGTCCCAGCCCTGGCCGCAGCCTAGTCCTTTCTC...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTGTGCAAGGCCACCCATaGAGGCACCAAACACCCACA +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFVQGHP*RHQTPT
Trigger: TGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCAC...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGGCCCGCCTACTCCTGTaGTACCAACATAGCACACGA +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVARLLL*YQHSTR
Trigger: TCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGCTGCTCCCAAGACTTTaGTCTCCATTTTATCAAGGC +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLLLPRL*SPFYQG
Trigger: GCCTTGATAAAATGGAGAGCAAAGTCTTGGGAGCAG...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGCGCTACTTTCCTAACTaGAGTACCCGAGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVRYFPN*STRVPS
Trigger: GCTGGGGACTCGGGTACTGCAGTTAGGAAAGTAGCG...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTGTCACAAACTCAGCATaGAGGGCTGGCTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFVTNSA*RAGFPG
Trigger: TCCCGGGAAGCCAGCCCTGCATGCTGAGTTTGTGAC...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGTGGCTGCTTTCTGTCTaGCCCTCCAGGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKWLLSV*PSRPLG
Trigger: ACCAAGAGGCCTGGAGGGGCAGACAGAAAGCAGCCA...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGCCCGCCGTGGCTGGCTaGTTTCTGTCTGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKPAVAG*FLSAPP
Trigger: TGGAGGGGCAGACAGAAAGCAGCCAGCCACGGCGGG...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTCGGAACACCATCAGCTaGGGCGGCCGGGAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGARNTIS*GGREPR
Trigger: GCGGGGCTCCCGGCCGCCGCAGCTGATGGTGTTCCG...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612932.6
ENST00000665913.1
CDS-3UTR CCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCCGGGGAAATGCATCTaGGGCATGGGGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGPGKCI*GMGWRR
Trigger: CCTCCTCCACCCCATGCCCCAGATGCATTTCCCCGG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGCCAACTCTCGAAGGCTaGCTGCAAAGCTGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVPTLEG*LQSCSS
Trigger: ACTCGAGCAGCTTTGCAGCCAGCCTTCGAGAGTTGG...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCTGCTCCATTCTAGTGTaGTGGGTGATACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPCSILV*WVIPCD
Trigger: ATCACAGGGTATCACCCACCACACTAGAATGGAGCA...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGATGCTCCATTCTAGTGTaGTGGGTGATACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRCSILV*WVIPCD
Trigger: ATCACAGGGTATCACCCACCACACTAGAATGGAGCA...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCTTCAAAGCTGGAGCTTaGCAACCAAATGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPFKAGA*QPNALG
Trigger: ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAA...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGTTGGTTCTTCAAAGCTaGAGCTTGGCAACCAAATGC +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLLVLQS*SLATKC
Trigger: GCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAA...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGGGGGTGGGTGTGAGGTaGAGCCCCACGCAGAGTACG +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKGVGVR*SPTQST
Trigger: CGTACTCTGCGTGGGGCTCCACCTCACACCCACCCC...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCTATCTCAAGGGGCAATaGGTTGAGAGCAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPYLKGQ*VESRGR
Trigger: TCTTCCTCTGCTCTCAACCCATTGCCCCTTGAGATA...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACCTCCCATCCCAGAAGTaGGATGGCAGTGATAAACCT +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNLPSQK*DGSDKP
Trigger: AGGTTTATCACTGCCATCCCACTTCTGGGATGGGAG...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACTACAAGGAGGAAGACTaGTCACTCCACGTGGGACTA +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNYKEED*SLHVGL
Trigger: TAGTCCCACGTGGAGTGACCAGTCTTCCTCCTTGTA...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACCTTCAGGCTCTATATTaGGGTGGCACTTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNLQALY*GGTSCK
Trigger: CTTGCAGGAAGTGCCACCCCAATATAGAGCCTGAAG...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGACTCCTTTGGGCTTTaGGCTCCACCTCACCATCAT +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKDSFGL*APPHHH
Trigger: ATGATGGTGAGGTGGAGCCCAAAGCCCAAAGGAGTC...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGACTCCTTTGGGCTTTaGGCTCCACCTCACCATCAT +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKDSFGL*APPHHH
Trigger: ATGATGGTGAGGTGGAGCCCAAAGCCCAAAGGAGTC...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGACCATAGTGAGGCCCTaGCAATGGGCAGGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKTIVRP*QWAGAL
Trigger: CAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGT...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGTCTGCCTCCCTCACATaGCCTGAGCTGACCATAGTG +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVSASLT*PELTIV
Trigger: CACTATGGTCAGCTCAGGCCATGTGAGGGAGGCAGA...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGGTGGCGCCACCTCCATaGCTCAGGTTCCAAGATGTA +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVVAPPP*LRFQDV
Trigger: TACATCTTGGAACCTGAGCCATGGAGGTGGCGCCAC...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACTGCAGGAGTTTCCTTTaGCCACACCTTTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNCRSFL*PHLSPQ
Trigger: CTGAGGAGAAAGGTGTGGCCAAAGGAAACTCCTGCA...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGGGAGGTAGATGGGAGTaGGACGGGATAGCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKGGRWE*DGIAGV
Trigger: CACACCTGCTATCCCGTCCCACTCCCATCTACCTCC...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTTCTTCCCGCCGTGGCTaGCTGCTTTCTGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGSSRRG*LLSVCP
Trigger: GGGGCAGACAGAAAGCAGCCAGCCACGGCGGGAAGA...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATCATGTCTTCCCGCCGTaGCTGGCTGCTTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNHVFPP*LAAFCL
Trigger: CAGACAGAAAGCAGCCAGCCACGGCGGGAAGACATG...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGCATGTCTTCCCGCCGTaGCTGGCTGCTTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKHVFPP*LAAFCL
Trigger: CAGACAGAAAGCAGCCAGCCACGGCGGGAAGACATG...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTCTGCTCCACCTGAGCTaGTTAGGGAGCTCAGGACGA +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFLLHLS*LGSSGR
Trigger: TCGTCCTGAGCTCCCTAACCAGCTCAGGTGGAGCAG...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAACCCAAAGTGGCACCTaGACCCTACCTGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTTQSGT*TLPVPW
Trigger: CCAAGGGACAGGTAGGGTCCAGGTGCCACTTTGGGT...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAGCCAGCTACCCAAAGTaGCACCTGGACCCTACCTGT +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTASYPK*HLDPTC
Trigger: ACAGGTAGGGTCCAGGTGCCACTTTGGGTAGCTGGC...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACTGTCAGGCTCGCAGCTaGAGCAGCCAGCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDCQARS*SSQLSR
Trigger: TCTGGAGAGCTGGCTGCTTCAGCTGCGAGCCTGACA...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCGGAGAAAAGGCACTTTaGGTTCTTGTCAACTTGGGT +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPGEKAL*VLVNLG
Trigger: ACCCAAGTTGACAAGAACTCAAAGTGCCTTTTCTCC...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCTATCATCTAGGAGGCTaGGGCTTCTTCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSYHLGG*GFFSEE
Trigger: CTCCTCCGAGAAGAAGCCTCAGCCTCCTAGATGATA...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGTCCTCAAACTTGGGATaGCACCACAGGCTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKSSNLG*HHRLKV
Trigger: AACCTTCAGCCTGTGGTGTCATCCCAAGTTTGAGGA...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAAACTCTACAACAGATTaGCAGCGGTCCTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRNSTTD*QRSSNL
Trigger: CAAGTTTGAGGACCGCTGTCAATCTGTTGTAGAGTT...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATTCTGAACCGCCCAGGTaGTGGGAAACACGATTGCCA +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNSEPPR*WETRLP
Trigger: TGGCAATCGTGTTTCCCATCACCTGGGCGGTTCAGA...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGTCTGAACCGCCCAGGTaGTGGGAAACACGATTGCCA +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKSEPPR*WETRLP
Trigger: TGGCAATCGTGTTTCCCATCACCTGGGCGGTTCAGA...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGCACGCAAAGGAGTCATaGAGACCCAACAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVHAKES*RPNSST
Trigger: AGTGGAGCTGTTGGGTCTTCATGACTCCTTTGCGTG...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACGGCAATGCTCCCAGATaGGGCAGTCCTATAAATTAC +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNGNAPR*GSPINY
Trigger: GTAATTTATAGGACTGCCTCATCTGGGAGCATTGCC...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCCTCCCTCACATGGCCTaGGCTGACCATAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESLPHMA*ADHSEA
Trigger: GGCCTCACTATGGTCAGCTCAGGCCATGTGAGGGAG...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGGCTCCATTTACTCTCTaGCCAGGCTGTATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVAPFTL*PGCIPE
Trigger: CTCTGGGATACAGCCTGGTCAGAGAGTAAATGGAGC...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCTAGGCACAGGCAGGTaGCCAGGCAAAGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGLGTGR*PGKGQH
Trigger: GTGCTGACCTTTGCCTGGTCACCTGCCTGTGCCTAG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCCTAGGCACAGGCAGGTaGCCAGGCAAAGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESLGTGR*PGKGQH
Trigger: GTGCTGACCTTTGCCTGGTCACCTGCCTGTGCCTAG...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCGAAACAGGAAGAAACTaGGCGACACCTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSETGRN*ATPARK
Trigger: CTTCCTGGCAGGTGTCGCTCAGTTTCTTCCTGTTTC...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTTCAGGGCCTGGGGGCTaGAGCAGAAGCCGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKASGPGG*SRSRPP
Trigger: GGGCGGCCGGCTTCTGCTGCAGCCCCCAGGCCCTGA...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTTGCTGCTGCTGCTGCTaGTGCTCCCCTCTACTCAGG +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGCCCCC*CSPLLR
Trigger: CCTGAGTAGAGGGGAGCAGCAGCAGCAGCAGCAGCA...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACTGCTGCTGCTGCTGCTaGTGCTCCCCTCTACTCAGG +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINCCCCC*CSPLLR
Trigger: CCTGAGTAGAGGGGAGCAGCAGCAGCAGCAGCAGCA...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGGGGGCGGGGGAGGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGGGGGG*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAACCTCCCCCGCCCCC...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGGGGGCGGGGGAGGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNGGGGG*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAACCTCCCCCGCCCCC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCGCCGGAGCCACCGTTaGAGCTCTTGGTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGRRSHR*SSWCER
Trigger: TCTTTCGCACCAAGAGCTGCAACGGTGGCTCCGGCG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGGTAGGGGGAAAGACTaGAAGGAAGACCCCATCGGA +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNGRGKD*KEDPIG
Trigger: TCCGATGGGGTCTTCCTTGCAGTCTTTCCCCCTACC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACTGTGGGGGTTGGCTGTaGAGGGATTCAGCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINCGGWL*RDSAAR
Trigger: CCGAGCAGCTGAATCCCTGCACAGCCAACCCCCACA...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTTGTGGGGGTTGGCTGTaGAGGGATTCAGCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGCGGWL*RDSAAR
Trigger: CCGAGCAGCTGAATCCCTGCACAGCCAACCCCCACA...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTTGTGGGGGTTGGCTGTaGAGGGATTCAGCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGCGGWL*RDSAAR
Trigger: CCGAGCAGCTGAATCCCTGCACAGCCAACCCCCACA...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACTGTGGGGGTTGGCTGTaGAGGGATTCAGCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDCGGWL*RDSAAR
Trigger: CCGAGCAGCTGAATCCCTGCACAGCCAACCCCCACA...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCATTTCAGCTTCATCTCTaGATCTTCCCAATTCATTGG +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPFQLHL*IFPIHW
Trigger: CCAATGAATTGGGAAGATGCAGAGATGAAGCTGAAA...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGTCGTATCCGGAATCTaGAAAGGTGCTGGAGGGATT +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKVVSGI*KGAGGI
Trigger: AATCCCTCCAGCACCTTTGCAGATTCCGGATACGAC...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACGAGGGTTCCACCTCTTaGTTCTGTTTGGAAATGAGC +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNEGSTS*FCLEMS
Trigger: GCTCATTTCCAAACAGAAGCAAGAGGTGGAACCCTC...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGGCACAAACCCCAACTaGCTTCAAGGTGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKGTNPN*LQGEFS
Trigger: GGAAAACTCACCTTGAAGGCAGTTGGGGTTTGTGCC...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACTGGGGTGGCACTTCCTaGAAGATGGCGAGTTATATT +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNWGGTS*KMASYI
Trigger: AATATAACTCGCCATCTTGCAGGAAGTGCCACCCCA...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAATTTTCTGCTTGATGTaGAGCAGTCACCTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPIFCLM*SSHLKA
Trigger: AGCTTTTAGGTGACTGCTGCACATCAAGCAGAAAAT...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAGCCCGCCTACTCCTGTaGTACCAACATAGCACACGA +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTARLLL*YQHSTR
Trigger: TCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCAAGGAGCAGGAGCCATaGAGGAGTTTCCTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSKEQEP*RSFLWP
Trigger: TGGCCAAAGGAAACTCCTGCATGGCTCCTGCTCCTT...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCACAGTGGAAAACAAATaGCAGGTCTCCGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSTVENK*QVSAQW
Trigger: CCACTGGGCGGAGACCTGGCATTTGTTTTCCACTGT...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGACTGCTCCCAAGACTTTaGTCTCCATTTTATCAAGGC +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRLLPRL*SPFYQG
Trigger: GCCTTGATAAAATGGAGAGCAAAGTCTTGGGAGCAG...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAACAACCCCCATTTCACTaGTCCCAAGACTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKQPPFH*SQDFAL
Trigger: GAGAGCAAAGTCTTGGGAGCAGTGAAATGGGGGTTG...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTAGGAGGAGGGGGAGTTaGAGGGTGTGGAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGRRRGS*RVWRGQ
Trigger: CTGACCTCTCCACACCCTCCAACTCCCCCTCCTCCT...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTAGGAGGAGGGGGAGTTaGAGGGTGTGGAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGRRRGS*RVWRGQ
Trigger: CTGACCTCTCCACACCCTCCAACTCCCCCTCCTCCT...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGATTCAGCTGCTCGGATaGGAGCAATCCGGGGAAATG +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVIQLLG*EQSGEM
Trigger: CATTTCCCCGGATTGCTCCCATCCGAGCAGCTGAAT...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCACACTGGAGGTGCTGTaGGGGTTGGCTGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESTLEVL*GLAVQG
Trigger: TCCCTGCACAGCCAACCCCCACAGCACCTCCAGTGT...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCATCTTCCCAATTCATTaGCCCCCAATACCAACCACA +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPIFPIH*PPIPTT
Trigger: TGTGGTTGGTATTGGGGGCCAATGAATTGGGAAGAT...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACGAGCCCCTCGCTACGTaGAGGGTTCCACCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINEPLAT*RVPPLA
Trigger: AGCAAGAGGTGGAACCCTCCACGTAGCGAGGGGCTC...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGAGCCCCTCGCTACGTaGAGGGTTCCACCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGEPLAT*RVPPLA
Trigger: AGCAAGAGGTGGAACCCTCCACGTAGCGAGGGGCTC...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACAGCCCCAGGGCTGCGTaGGGAACCAAAGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDSPRAA*GTKVSA
Trigger: TGCAGAGACTTTGGTTCCCCACGCAGCCCTGGGGCT...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTTTGGCACCAGCTGAATaGCCGTCCCCTGTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGLAPAE*PSPVPS
Trigger: GGAGGGAACAGGGGACGGCCATTCAGCTGGTGCCAA...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCTTGGCACCAGCTGAATaGCCGTCCCCTGTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESLAPAE*PSPVPS
Trigger: GGAGGGAACAGGGGACGGCCATTCAGCTGGTGCCAA...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACGGAAGAGCACAACTGTaGGAGCTGTATTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNGRAQL*ELYFSP
Trigger: AGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCC...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTGCACAGCTCATCTTGTaGGCCACCCTTCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFAQLIL*ATLPQS
Trigger: TGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGC...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATCTCAGGTCTGCCTGGTaGCTGGGAAGCTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNLRSAW*LGSFHL
Trigger: TAGATGGAAGCTTCCCAGCCACCAGGCAGACCTGAG...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGTGAGGCCCTGGCAATaGGCAGGAGCCTTGCTGACT +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGVRPWQ*AGALLT
Trigger: AGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCAC...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAAGCAGTAGTTGTCACTaGCTCACAGCAGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKSSSCH*LTAAHS
Trigger: AGAGTGAGCTGCTGTGAGCCAGTGACAACTACTGCT...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAATGCAGGAGTTTCCTTTaGCCACACCTTTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKCRSFL*PHLSPQ
Trigger: CTGAGGAGAAAGGTGTGGCCAAAGGAAACTCCTGCA...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCTTTCTGGTGAAAAATTaGCAACCACCCCGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIFLVKN*QPPRAQ
Trigger: CTGGGCTCGGGGTGGTTGCCAATTTTTCACCAGAAA...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACCTCCCCAAAAAGACATaGGTAGGTACAGCAATCATA +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHLPKKT*VGTAII
Trigger: TATGATTGCTGTACCTACCCATGTCTTTTTGGGGAG...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTGGATGTGATCTATCCTaGCGAGCTGTCGTATCCGGA +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFGCDLS*RAVVSG
Trigger: TCCGGATACGACAGCTCGTCAGGATAGATCACATCC...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTGGGAGATCTGGGATGTaGTCTATCCTGACGAGCTGT +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFGRSGM*SILTSC
Trigger: ACAGCTCGTCAGGATAGATCACATCCCAGATCTCCC...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGCTTCTGTTTGGAAATaGGCTGCGCTTCCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKASVWK*AALPLE
Trigger: CTCTAAAGGAAGCGCAGCTCATTTCCAAACAGAAGC...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGAAACACGATTGCCATaGCAGCTGGCAGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKETRLP*QLAEAI
Trigger: TATTGCTTCTGCCAGCTGTCATGGCAATCGTGTTTC...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCCTAAGGAAATCCCGTaGGGGCTGCGTTCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGPKEIP*GLRSES
Trigger: GCTCTCAGAACGCAGCCCTCACGGGATTTCCTTAGG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGAGACCAGCAGGATCTaGTCCGGAAATGTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNETSRI*SGNVWV
Trigger: AACCCAGACATTTCCGGATCAGATCCTGCTGGTCTC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCTTGTACCTGAATGTATaGGTTCTCCAGAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPLYLNV*VLQKKP
Trigger: GGGTTTCTTCTGGAGAACTCATACATTCAGGTACAA...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGAGCTCCTCCCTTACATaGCAGGGGGTGTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKSSSLT*QGVCHS
Trigger: AGAATGACACACCCCCTGTCATGTAAGGGAGGAGCT...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTAGCTCCTCCCTTACATaGCAGGGGGTGTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFSSSLT*QGVCHS
Trigger: AGAATGACACACCCCCTGTCATGTAAGGGAGGAGCT...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAGTGAAGGCTCCAATGTaGAAGCAGGGTCTACCACAG +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTVKAPM*KQGLPQ
Trigger: CTGTGGTAGACCCTGCTTTCACATTGGAGCCTTCAC...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACCTCAGGACGAAACTCTaGGCGGGGCAGTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINLRTKL*AGQCGM
Trigger: CATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAG...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACACCCCGAGCCCAGAATaGCACCCCTCTTCATCGAGT +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDTPSPE*HPSSSS
Trigger: ACTCGATGAAGAGGGGTGTCATTCTGGGCTCGGGGT...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTCCCAGAGCCGCCAACTaGGCCTCTAGTCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAPRAAN*ASSPAA
Trigger: GGCGGCTGGACTAGAGGCGCAGTTGGCGGCTCTGGG...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGTGCAGGGATTCAGCTaGTCGGATGGGAGCAATCCG +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGVQGFS*SDGSNP
Trigger: CGGATTGCTCCCATCCGAGCAGCTGAATCCCTGCAC...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTCTCTCGAAGGCTGGCTaGAAAGCTGCTCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGLSKAG*KAARVR
Trigger: CCTGACTCGAGCAGCTTTGCAGCCAGCCTTCGAGAG...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACCTCTCGAAGGCTGGCTaGAAAGCTGCTCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINLSKAG*KAARVR
Trigger: CCTGACTCGAGCAGCTTTGCAGCCAGCCTTCGAGAG...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGGGAACCAAAGTCTCTaGACAGAGAATCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKGNQSL*TENPNL
Trigger: AAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCC...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAGAACTCCCAGTCCTTTaGAAACCTCAAGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTELPVL*KPQAPP
Trigger: AGGAGGGGCTTGAGGTTTGCAAAGGACTGGGAGTTC...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGTGCTCCTACAACAGCTaGCCATGGCAACAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKCSYNS*PWQQEA
Trigger: TGCCTCTTGTTGCCATGGGCAGCTGTTGTAGGAGCA...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCAAATACAGAAGCCCTTaGTACCTCCCATCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIKYRSP*YLPSQK
Trigger: CTTCTGGGATGGGAGGTAGCAAGGGCTTCTGTATTT...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACCTGCTTCCTTGCTTTTaGTCATGTGTTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHLLPCF*SCVFHL
Trigger: GAGATGAAAAACACATGAGCAAAAGCAAGGAAGCAG...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCGCTCTAACAGGGCTGTaGACTGTTCAGTACATGCCA +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSALTGL*TVQYMP
Trigger: TGGCATGTACTGAACAGTGCACAGCCCTGTTAGAGC...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATCTTGCGCTGCTGTTTTaGAGCCCACTCCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNLALLF*SPLHRE
Trigger: TTCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAAG...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAAAGACTGTCTCCTCTTaGGCTGCTGTTTTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTKTVSS*AAVLQP
Trigger: GGGCTGCAAAACAGCAGCGCAAGAGGAGACAGTCTT...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACGTGCAAGGCCACCCATaGAGGCACCAAACACCCACA +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDVQGHP*RHQTPT
Trigger: TGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCAC...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGGCAATCTCGGCTCAGTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKAISAQ*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCACTGAGCCGAGATTGC...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGTGTTACAGGGGTGTCTaGAGCTATCTCCACACCATC +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVCYRGV*SYLHTI
Trigger: GATGGTGTGGAGATAGCTGCAGACACCCCTGTAACA...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATACAGTGGAAAACAAATaGCAGGTCTCCGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNTVENK*QVSAQW
Trigger: CCACTGGGCGGAGACCTGGCATTTGTTTTCCACTGT...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGTCTACCACAGGGACGTaGAGACTTGACCTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVSTTGT*RLDLCD
Trigger: GTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGA...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACCTGCTCCCAAGACTTTaGTCTCCATTTTATCAAGGC +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNLLPRL*SPFYQG
Trigger: GCCTTGATAAAATGGAGAGCAAAGTCTTGGGAGCAG...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATAGGTGCTGCCACACCTaGTCCTCTGCTCCATTTACT +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNRCCHT*SSAPFT
Trigger: AGTAAATGGAGCAGAGGAGCAGGTGTGGCAGCACCT...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612932.6
ENST00000665913.1
CDS-3UTR GCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTAGGTGCTGCCACACCTaGTCCTCTGCTCCATTTACT +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFRCCHT*SSAPFT
Trigger: AGTAAATGGAGCAGAGGAGCAGGTGTGGCAGCACCT...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612932.6
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGAGTTCTTGTCAACTTaGGTTTCCTCCCCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNEFLST*VSSPRP
Trigger: TGGACGCGGGGAGGAAACCCAAGTTGACAAGAACTC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGAGGAGGAGGGGGAGTTaGAGGGTGTGGAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKRRRGS*RVWRGQ
Trigger: CTGACCTCTCCACACCCTCCAACTCCCCCTCCTCCT...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTAGGTGCTGTGGGGGTTaGCTGTGCAGGGATTCAGCT +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGRCCGG*LCRDSA
Trigger: AGCTGAATCCCTGCACAGCCAACCCCCACAGCACCT...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTAGGTGCTGTGGGGGTTaGCTGTGCAGGGATTCAGCT +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGRCCGG*LCRDSA
Trigger: AGCTGAATCCCTGCACAGCCAACCCCCACAGCACCT...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAATGCTCCATTCTAGTGTaGTGGGTGATACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKCSILV*WVIPCD
Trigger: ATCACAGGGTATCACCCACCACACTAGAATGGAGCA...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACCAGCTGGACAGGAGTTaGTGGCAGTCCTGGAACCCT +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDQLDRS*WQSWNP
Trigger: AGGGTTCCAGGACTGCCACCAACTCCTGTCCAGCTG...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGAGCCCCAGGGCTGCGTaGGGAACCAAAGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKSPRAA*GTKVSA
Trigger: TGCAGAGACTTTGGTTCCCCACGCAGCCCTGGGGCT...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACCTCCCACCCCTTCTTTaGACCTGCTCACCCTTCGCA +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINLPPLL*TCSPFA
Trigger: TGCGAAGGGTGAGCAGGTCCAAAGAAGGGGTGGGAG...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCGCACTCAGGTCTGCCTaGTGGCTGGGAAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESALRSA*WLGSFH
Trigger: ATGGAAGCTTCCCAGCCACCAGGCAGACCTGAGTGC...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACGCACTCAGGTCTGCCTaGTGGCTGGGAAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDALRSA*WLGSFH
Trigger: ATGGAAGCTTCCCAGCCACCAGGCAGACCTGAGTGC...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGATAGCACAAATTCAGTaGAAGAACAGCTGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLIAQIQ*KNSCVD
Trigger: GTCAACACAGCTGTTCTTCCACTGAATTTGTGCTAT...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTTTCCCGGGAGGTAGATaGGAGTGGGACGGGATAGCA +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGFPGGR*EWDGIA
Trigger: TGCTATCCCGTCCCACTCCCATCTACCTCCCGGGAA...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCAGGCAGCACCAGTGTaGGCATTCCAACAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGQAAPV*AFQQPA
Trigger: AGCTGGCTGTTGGAATGCCCACACTGGTGCTGCCTG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACACTGGGAATTGTACATaGGGTTTCCAAACAGGACCT +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNTGNCT*GFQTGP
Trigger: AGGTCCTGTTTGGAAACCCCATGTACAATTCCCAGT...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCCTCCCCAAAAAGACATaGGTAGGTACAGCAATCATA +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPLPKKT*VGTAII
Trigger: TATGATTGCTGTACCTACCCATGTCTTTTTGGGGAG...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGTGGGTGATACCCTGTaGTCGGAAACTGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGVGDTL*SETEAQ
Trigger: CTGAGCCTCAGTTTCCGATCACAGGGTATCACCCAC...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGTGGGTGATACCCTGTaGTCGGAAACTGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGVGDTL*SETEAQ
Trigger: CTGAGCCTCAGTTTCCGATCACAGGGTATCACCCAC...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACATCCTCAAACTTGGGATaGCACCACAGGCTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTSSNLG*HHRLKV
Trigger: AACCTTCAGCCTGTGGTGTCATCCCAAGTTTGAGGA...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGGCTTCTGTTTGGAAATaGGCTGCGCTTCCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVASVWK*AALPLE
Trigger: CTCTAAAGGAAGCGCAGCTCATTTCCAAACAGAAGC...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCATGAGAGGTGTTTCTaGACTCAGGTTCCTAAACCT +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIHERCF*TQVPKP
Trigger: AGGTTTAGGAACCTGAGTTCAGAAACACCTCTCATG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGCTAGTACAGCTTCCATaGGAGGTGTTTCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKLVQLP*EVFLNS
Trigger: TGAGTTCAGAAACACCTCTCATGGAAGCTGTACTAG...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGTGTCTGTCCTGCCATTaGCTACAACCCAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKCLSCH*LQPKAS
Trigger: TGAGGCTTTGGGTTGTAGTCAATGGCAGGACAGACA...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGAGGAATACATTTAAATaGGCTCTGCACAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKRNTFK*ALHSTG
Trigger: GCCAGTGCTGTGCAGAGCTCATTTAAATGTATTCCT...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACGAAGAACAGCTGTGTTaGCGATTAGAGATAAAAATC +
Preference number: 4 (lower is better)
Translates to: LPLTALCKATHAGTKHPHEEQLC*RLEIKI
Trigger: GATTTTTATCTCTAATCGTCAACACAGCTGTTCTTC...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGCTCAGGACGAAACTCTaGGCGGGGCAGTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKLRTKL*AGQCGM
Trigger: CATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAG...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACATGCATCTAGGAGGCTaGGGCTTCTTCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDMHLGG*GFFSEE
Trigger: CTCCTCCGAGAAGAAGCCTCAGCCTCCTAGATGCAT...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613678.5
ENST00000631692.1
CDS-3UTR TCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTATGCATCTAGGAGGCTaGGGCTTCTTCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGMHLGG*GFFSEE
Trigger: CTCCTCCGAGAAGAAGCCTCAGCCTCCTAGATGCAT...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613678.5
ENST00000631692.1
CDS-3UTR GCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGATCCAGGGCACAGCGGTaGCGGGGACACAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGSRAQR*RGHSSS
Trigger: GGAACTGCTGTGTCCCCGGCACCGCTGTGCCCTGGA...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGACTCCAGAAGGCCTCTTaGCGGTCCCATCCCCACCGC +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGLQKAS*RSHPHR
Trigger: GCGGTGGGGATGGGACCGGCAAGAGGCCTTCTGGAG...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCTGTTTGGAAATGAGCTaGGCTTCCTTTAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPICLEMS*ASFRDR
Trigger: CCTGTCTCTAAAGGAAGCGCAGCTCATTTCCAAACA...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACCAGAGTACGGTCATGTaGTTCTTCCAAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINQSTVM*FFQAPG
Trigger: CCCTGGGGCTTGGAAGAAGCACATGACCGTACTCTG...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCCCCTTCTTTGGACCTaGTCACCCTTCGCACCACTT +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGPLLWT*SPFAPL
Trigger: AAGTGGTGCGAAGGGTGAGCAGGTCCAAAGAAGGGG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGATGGGAAACACGATTaGCATGACAGCTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNDGKHD*HDSWQK
Trigger: CTTCTGCCAGCTGTCATGGCAATCGTGTTTCCCATC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGTTCAGTACATGCCATaGAGATTTCTGCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKVQYMP*RFLLPC
Trigger: GCAAGGAAGCAGAAATCTGCATGGCATGTACTGAAC...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGCTCTAACAGGGCTGTaGACTGTTCAGTACATGCCA +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNALTGL*TVQYMP
Trigger: TGGCATGTACTGAACAGTGCACAGCCCTGTTAGAGC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACACAACCCCCATTTCACTaGTCCCAAGACTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTQPPFH*SQDFAL
Trigger: GAGAGCAAAGTCTTGGGAGCAGTGAAATGGGGGTTG...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCGCTACTTTCCTAACTaGAGTACCCGAGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGRYFPN*STRVPS
Trigger: GCTGGGGACTCGGGTACTGCAGTTAGGAAAGTAGCG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGAAACTGAGCGACACCTaGCAGGAAGGTCAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKKLSDT*QEGQEA
Trigger: TGCTTCTTGACCTTCCTGGCAGGTGTCGCTCAGTTT...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAAAACTGAGCGACACCTaGCAGGAAGGTCAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTKLSDT*QEGQEA
Trigger: TGCTTCTTGACCTTCCTGGCAGGTGTCGCTCAGTTT...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTGCGGCCGACCCACGTTaGGGAACACCATCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAAADPR*GTPSAA
Trigger: CGCAGCTGATGGTGTTCCGCAACGTGGGTCGGCCGC...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCGGCCGACCCACGTTaGGGAACACCATCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGAADPR*GTPSAA
Trigger: CGCAGCTGATGGTGTTCCGCAACGTGGGTCGGCCGC...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACCCAACTCTCGAAGGCTaGCTGCAAAGCTGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDPTLEG*LQSCSS
Trigger: ACTCGAGCAGCTTTGCAGCCAGCCTTCGAGAGTTGG...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACCCAACTCTCGAAGGCTaGCTGCAAAGCTGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINPTLEG*LQSCSS
Trigger: ACTCGAGCAGCTTTGCAGCCAGCCTTCGAGAGTTGG...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGCAGCTGGACAGGAGTTaGTGGCAGTCCTGGAACCCT +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKQLDRS*WQSWNP
Trigger: AGGGTTCCAGGACTGCCACCAACTCCTGTCCAGCTG...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCCAGCTAAGGCCAATTaGCTAGGTTTTGCCCAATAT +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIPAKAN*LGFAQY
Trigger: ATATTGGGCAAAACCTAGCCAATTGGCCTTAGCTGG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCCTTTCCCAGACCATCTaGTCTACCCTGATCTTATCT +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPILSQTI*STLILS
Trigger: AGATAAGATCAGGGTAGACCAGATGGTCTGGGAAAG...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCCTCAGGTCTGCCTGGTaGCTGGGAAGCTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESLRSAW*LGSFHL
Trigger: TAGATGGAAGCTTCCCAGCCACCAGGCAGACCTGAG...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCTCTGCCTCCCTCACATaGCCTGAGCTGACCATAGTG +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESSASLT*PELTIV
Trigger: CACTATGGTCAGCTCAGGCCATGTGAGGGAGGCAGA...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGCTGCTCCACCTGAGCTaGTTAGGGAGCTCAGGACGA +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKLLHLS*LGSSGR
Trigger: TCGTCCTGAGCTCCCTAACCAGCTCAGGTGGAGCAG...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACACCCTACCTGTCCCTTaGACAGGTTCTGGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDTLPVP*TGSGPK
Trigger: CTTAGGCCCAGAACCTGTCCAAGGGACAGGTAGGGT...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGGCCAGCTACCCAAAGTaGCACCTGGACCCTACCTGT +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKASYPK*HLDPTC
Trigger: ACAGGTAGGGTCCAGGTGCCACTTTGGGTAGCTGGC...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGCAGGCAGCACCAGTGTaGGCATTCCAACAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKQAAPV*AFQQPA
Trigger: AGCTGGCTGTTGGAATGCCCACACTGGTGCTGCCTG...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTAAAAACGTACAGCAGTaGCTATGCCACAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFKNVQQ*LCHRQH
Trigger: GTGCTGCCTGTGGCATAGCCACTGCTGTACGTTTTT...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATTTTCTGGTGAAAAATTaGCAACCACCCCGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNFLVKN*QPPRAQ
Trigger: CTGGGCTCGGGGTGGTTGCCAATTTTTCACCAGAAA...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCCTGTGATCGGAAACTaGGGCTCAGGATGTAACGAG +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGPVIGN*GSGCNE
Trigger: CTCGTTACATCCTGAGCCTCAGTTTCCGATCACAGG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACCCTGTGATCGGAAACTaGGGCTCAGGATGTAACGAG +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDPVIGN*GSGCNE
Trigger: CTCGTTACATCCTGAGCCTCAGTTTCCGATCACAGG...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCGATGACACCACAGGCTaGAGGTTCCTCTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESDDTTG*RFLCSA
Trigger: AGCACTACAGAGGAACCTTCAGCCTGTGGTGTCATC...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGGATGTGATCTATCCTaGCGAGCTGTCGTATCCGGA +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGGCDLS*RAVVSG
Trigger: TCCGGATACGACAGCTCGTCAGGATAGATCACATCC...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGGAGATCTGGGATGTaGTCTATCCTGACGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGGRSGM*SILTSC
Trigger: ACAGCTCGTCAGGATAGATCACATCCCAGATCTCCC...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTGCCTTTGGCACCAGCTaGATGGCCGTCCCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAAFGTS*MAVPCS
Trigger: GGAACAGGGGACGGCCATTCAGCTGGTGCCAAAGGC...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCCCATGACTGGCTCTaGACCGCCCAGGTGATGGGA +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGAHDWL*TAQVMG
Trigger: TCCCATCACCTGGGCGGTTCAGAGCCAGTCATGGGC...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCTTCCCCCTCACAAGCTaGCAGGCACATGGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESFPLTS*QAHGSN
Trigger: GTTACTTCCATGTGCCTGTCAGCTTGTGAGGGGGAA...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACGAGACCAGCAGGATCTaGTCCGGAAATGTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDETSRI*SGNVWV
Trigger: AACCCAGACATTTCCGGATCAGATCCTGCTGGTCTC...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTGGGCAGGAGCCTTGCTaGCTCCTTTGGGCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAGQEPC*LLWALG
Trigger: GCCCAAAGCCCAAAGGAGTCAGCAAGGCTCCTGCCC...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACCCAAACACCCACACCTaGCGAAGACTGTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINPNTHT*RRLSPL
Trigger: AAGAGGAGACAGTCTTCGTCAGGTGTGGGTGTTTGG...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTCCAAACACCCACACCTaGCGAAGACTGTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGPNTHT*RRLSPL
Trigger: AAGAGGAGACAGTCTTCGTCAGGTGTGGGTGTTTGG...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACGCTCCATTTACTCTCTaGCCAGGCTGTATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDAPFTL*PGCIPE
Trigger: CTCTGGGATACAGCCTGGTCAGAGAGTAAATGGAGC...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCGCTCCATTTACTCTCTaGCCAGGCTGTATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESAPFTL*PGCIPE
Trigger: CTCTGGGATACAGCCTGGTCAGAGAGTAAATGGAGC...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCAGGGAAAGATCTAACTaGAGGAAAAAGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSRERSN*RKKLLL
Trigger: GAGGAGGAGCTTTTTCCTTCAGTTAGATCTTTCCCT...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAGAAGAACAGCTGTGTTaGCGATTAGAGATAAAAATC +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPREEQLC*RLEIKI
Trigger: GATTTTTATCTCTAATCGTCAACACAGCTGTTCTTC...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCAGCGCCTGTCTCTATaGTCCAACCCCCATTTCACT +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGQRLSL*SNPHFT
Trigger: AGTGAAATGGGGGTTGGATCATAGAGACAGGCGCTG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACGAAACAGGAAGAAACTaGGCGACACCTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINETGRN*ATPARK
Trigger: CTTCCTGGCAGGTGTCGCTCAGTTTCTTCCTGTTTC...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGAAATGAAATGGGAATaGAGCAGGTCACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKEMKWE*SRSQTQ
Trigger: CTGAGTTTGTGACCTGCTTCATTCCCATTTCATTTC...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATAGAGGGACCAAGTCCTaGAGCGGGAAGGGCACCGGA +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNRGTKS*SGKGTG
Trigger: TCCGGTGCCCTTCCCGCTGCAGGACTTGGTCCCTCT...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGGGTAGGGGGAAAGACTaGAAGGAAGACCCCATCGGA +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKGRGKD*KEDPIG
Trigger: TCCGATGGGGTCTTCCTTGCAGTCTTTCCCCCTACC...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACTTTCAGCTTCATCTCTaGATCTTCCCAATTCATTGG +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNFQLHL*IFPIHW
Trigger: CCAATGAATTGGGAAGATGCAGAGATGAAGCTGAAA...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGTTTCCATTCTTGGAGTaGATAATGGCTCTCTTAATA +
Preference number: 4 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLFPFLE*IMALLI
Trigger: TATTAAGAGAGCCATTATGCACTCCAAGAATGGAAA...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTCGGAATCTGCAAAGGTaGTGGAGGGATTTGACATTG +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFRNLQR*WRDLTL
Trigger: CAATGTCAAATCCCTCCAGCACCTTTGCAGATTCCG...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGGGAACCAAAGTCTCTaGACAGAGAATCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNGNQSL*TENPNL
Trigger: AAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGAACTCCCAGTCCTTTaGAAACCTCAAGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGELPVL*KPQAPP
Trigger: AGGAGGGGCTTGAGGTTTGCAAAGGACTGGGAGTTC...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACAAGAACCTGGAAACATaGTCCATTAAATTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNKNLET*SIKFSS
Trigger: GCTGCTGAATTTAATGGAGCATGTTTCCAGGTTCTT...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTTGGGGTGGCACTTCCTaGAAGATGGCGAGTTATATT +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFWGGTS*KMASYI
Trigger: AATATAACTCGCCATCTTGCAGGAAGTGCCACCCCA...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGGCACTGTTCAGTACATaGCATGCAGATTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVALFST*HADFCF
Trigger: GAAGCAGAAATCTGCATGGCATGTACTGAACAGTGC...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGAGAAAGGACTAGGCTaGGGCCAGGGCTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNEKGLG*GQGWDQ
Trigger: CTGGTCCCAGCCCTGGCCGCAGCCTAGTCCTTTCTC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACCTTGCGCTGCTGTTTTaGAGCCCACTCCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINLALLF*SPLHRE
Trigger: TTCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAAG...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACACATTTAAATGAGCTCTaGACAGCACTGGCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTHLNEL*TALAKE
Trigger: CTCCTTCGCCAGTGCTGTGCAGAGCTCATTTAAATG...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCAAGGAGCAGGAGCCATaGAGGAGTTTCCTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESKEQEP*RSFLWP
Trigger: TGGCCAAAGGAAACTCCTGCATGGCTCCTGCTCCTT...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCAGATGGCTACATGTATaGAATAGCACAAATTCAGTG +
Preference number: 4 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPRWLHV*NSTNSV
Trigger: CACTGAATTTGTGCTATTGCATACATGTAGCCATCT...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGAGTTCTTGTCAACTTaGGTTTCCTCCCCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGEFLST*VSSPRP
Trigger: TGGACGCGGGGAGGAAACCCAAGTTGACAAGAACTC...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACATTCAAAGCTGGAGCTTaGCAACCAAATGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTFKAGA*QPNALG
Trigger: ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAA...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGGGAAGAGCACAACTGTaGGAGCTGTATTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKGRAQL*ELYFSP
Trigger: AGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCC...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGCAATGTCATATGAATTaGCCATGGCCAGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVQCHMN*PWPAAE
Trigger: TTCTGCAGCTGGCCATGGCCAATTCATATGACATTG...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAAGAAAGAGAGTCCCATaGAACACACGCAAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTRKRVP*NTRKGV
Trigger: GACTCCTTTGCGTGTGTTCCATGGGACTCTCTTTCT...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGATCTAGAAAACCGCACTaGAAAGGATTCTTTAACCAT +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRSRKPH*KGFFNH
Trigger: ATGGTTAAAGAATCCTTTCCAGTGCGGTTTTCTAGA...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTAGCTCTGCACAGCACTaGCGAAGGAGGGACGGGCCT +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGASSAQH*RRRDGP
Trigger: AGGCCCGTCCCTCCTTCGCCAGTGCTGTGCAGAGCT...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCAAAGGTCAGCACCAATaGTCCCAAAGAGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESKGQHQ*SQRAGC
Trigger: GCAACCGGCTCTTTGGGACCATTGGTGCTGACCTTT...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACAGACAGGTCCTTTTCTaGCAGATTAGAGAATCAACA +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNRQVLF*QIREST
Trigger: TGTTGATTCTCTAATCTGCCAGAAAAGGACCTGTCT...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATCCCCTCCAGGCCTCTTaGTGTTGCAGAGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNPLQAS*CCRGGG
Trigger: ACCCCCTCCTCTGCAACACCAAGAGGCCTGGAGGGG...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTCCCCTCCAGGCCTCTTaGTGTTGCAGAGGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAPLQAS*CCRGGG
Trigger: ACCCCCTCCTCTGCAACACCAAGAGGCCTGGAGGGG...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGATGTCAGGCTCGCAGCTaGAGCAGCCAGCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGCQARS*SSQLSR
Trigger: TCTGGAGAGCTGGCTGCTTCAGCTGCGAGCCTGACA...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGGGAGAAAAGGCACTTTaGGTTCTTGTCAACTTGGGT +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKGEKAL*VLVNLG
Trigger: ACCCAAGTTGACAAGAACTCAAAGTGCCTTTTCTCC...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCTCCTCAAACTTGGGATaGCACCACAGGCTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESSSNLG*HHRLKV
Trigger: AACCTTCAGCCTGTGGTGTCATCCCAAGTTTGAGGA...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGGGGAGATCTGGGATGTaGTCTATCCTGACGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKGRSGM*SILTSC
Trigger: ACAGCTCGTCAGGATAGATCACATCCCAGATCTCCC...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACACTCACTCCTAAGTCATaGGTACAGTTTGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTLTPKS*VQFAMK
Trigger: CTTCATGGCAAACTGTACTCATGACTTAGGAGTGAG...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTAGAAGAGGTACCACATaGCAAATCAGAGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGRRGTT*QIRGGL
Trigger: CAGCCCACCTCTGATTTGTCATGTGGTACCTCTTCT...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTTGTCTGTCCTGCCATTaGCTACAACCCAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGCLSCH*LQPKAS
Trigger: TGAGGCTTTGGGTTGTAGTCAATGGCAGGACAGACA...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGAACTCCCGACCTCATaGTCCACCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGELPTS*STHLSL
Trigger: GAGGCTGAGGTGGGTGGATCATGAGGTCGGGAGTTC...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTGAACTCCCGACCTCATaGTCCACCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAELPTS*STHLSL
Trigger: GAGGCTGAGGTGGGTGGATCATGAGGTCGGGAGTTC...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACGCCTTTTCCAATTTGTaGCTTGAAAATACAACCAGA +
Preference number: 4 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNAFSNL*LENTTR
Trigger: TCTGGTTGTATTTTCAAGTCACAAATTGGAAAAGGC...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATAGGGAAAGATCTAACTaGAGGAAAAAGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNRERSN*RKKLLL
Trigger: GAGGAGGAGCTTTTTCCTTCAGTTAGATCTTTCCCT...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCGAAATGAAATGGGAATaGAGCAGGTCACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSEMKWE*SRSQTQ
Trigger: CTGAGTTTGTGACCTGCTTCATTCCCATTTCATTTC...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTAGAGGGACCAAGTCCTaGAGCGGGAAGGGCACCGGA +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKARGTKS*SGKGTG
Trigger: TCCGGTGCCCTTCCCGCTGCAGGACTTGGTCCCTCT...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATTGCTGCTGCTGCTGCTaGTGCTCCCCTCTACTCAGG +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNCCCCC*CSPLLR
Trigger: CCTGAGTAGAGGGGAGCAGCAGCAGCAGCAGCAGCA...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGACGCCGGAGCCACCGTTaGAGCTCTTGGTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGRRSHR*SSWCER
Trigger: TCTTTCGCACCAAGAGCTGCAACGGTGGCTCCGGCG...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTCGCCGGAGCCACCGTTaGAGCTCTTGGTGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGARRSHR*SSWCER
Trigger: TCTTTCGCACCAAGAGCTGCAACGGTGGCTCCGGCG...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTAGGGGACACTGGAGGTaGTGTGGGGGTTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKARGHWR*CGGWLC
Trigger: GCACAGCCAACCCCCACAGCACCTCCAGTGTCCCCT...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGATTTCCATTCTTGGAGTaGATAATGGCTCTCTTAATA +
Preference number: 4 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRFPFLE*IMALLI
Trigger: TATTAAGAGAGCCATTATGCACTCCAAGAATGGAAA...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGTCGTATCCGGAATCTaGAAAGGTGCTGGAGGGATT +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGVVSGI*KGAGGI
Trigger: AATCCCTCCAGCACCTTTGCAGATTCCGGATACGAC...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATTCCAAGCCCCAGGGCTaGGTGGGGAACCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNSKPQG*VGNQSL
Trigger: GAGACTTTGGTTCCCCACGCAGCCCTGGGGCTTGGA...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGATCCAAGCCCCAGGGCTaGGTGGGGAACCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGSKPQG*VGNQSL
Trigger: GAGACTTTGGTTCCCCACGCAGCCCTGGGGCTTGGA...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGGCACAAACCCCAACTaGCTTCAAGGTGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGGTNPN*LQGEFS
Trigger: GGAAAACTCACCTTGAAGGCAGTTGGGGTTTGTGCC...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGATGGGAAACACGATTaGCATGACAGCTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGDGKHD*HDSWQK
Trigger: CTTCTGCCAGCTGTCATGGCAATCGTGTTTCCCATC...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGGTCATGAGTACAGTTTaGCATGAAGAACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVVMSTV*HEEPGN
Trigger: GTTTCCAGGTTCTTCATGGCAAACTGTACTCATGAC...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGCTGCTTCCTTGCTTTTaGTCATGTGTTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKLLPCF*SCVFHL
Trigger: GAGATGAAAAACACATGAGCAAAAGCAAGGAAGCAG...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAGCACTGTTCAGTACATaGCATGCAGATTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTALFST*HADFCF
Trigger: GAAGCAGAAATCTGCATGGCATGTACTGAACAGTGC...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGAGAAAGGACTAGGCTaGGGCCAGGGCTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAEKGLG*GQGWDQ
Trigger: CTGGTCCCAGCCCTGGCCGCAGCCTAGTCCTTTCTC...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGTCATCTTCCCCTAACTaGTCTGTGCAAGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKSSSPN*SVQGHP
Trigger: TGGGTGGCCTTGCACAGAGCAGTTAGGGGAAGATGA...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTGCAATCTCGGCTCAGTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAAISAQ*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCACTGAGCCGAGATTGC...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTCCTCGCCCCAGTTTCTaGAGGGAGCAGAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAPRPSF*REQRAS
Trigger: TGAAGCCCTCTGCTCCCTGCAGAAACTGGGGCGAGG...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTTCTACCACAGGGACGTaGAGACTTGACCTTTGTGAC +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGSTTGT*RLDLCD
Trigger: GTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGA...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACAAACTGAGCGACACCTaGCAGGAAGGTCAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINKLSDT*QEGQEA
Trigger: TGCTTCTTGACCTTCCTGGCAGGTGTCGCTCAGTTT...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCGATCGCAGTCCAGCTaGAACCAAACATGCATGTCT +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGRSQSS*NQTCMS
Trigger: AGACATGCATGTTTGGTTGCAGCTGGACTGCGATCG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCCGATCGCAGTCCAGCTaGAACCAAACATGCATGTCT +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESRSQSS*NQTCMS
Trigger: AGACATGCATGTTTGGTTGCAGCTGGACTGCGATCG...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTCCGGGGAAATGCATCTaGGGCATGGGGTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAPGKCI*GMGWRR
Trigger: CCTCCTCCACCCCATGCCCCAGATGCATTTCCCCGG...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGATTCAGCTGCTCGGATaGGAGCAATCCGGGGAAATG +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKIQLLG*EQSGEM
Trigger: CATTTCCCCGGATTGCTCCCATCCGAGCAGCTGAAT...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATACACTGGAGGTGCTGTaGGGGTTGGCTGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNTLEVL*GLAVQG
Trigger: TCCCTGCACAGCCAACCCCCACAGCACCTCCAGTGT...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGATCTTCCCAATTCATTaGCCCCCAATACCAACCACA +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKIFPIH*PPIPTT
Trigger: TGTGGTTGGTATTGGGGGCCAATGAATTGGGAAGAT...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCGCAGTCCTGGAACCCTaGATCTTAAGAAATAGAGAA +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSAVLEP*ILRNRE
Trigger: TTCTCTATTTCTTAAGATCCAGGGTTCCAGGACTGC...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACAGGCAGTGGGAGATCTaGGATGTGATCTATCCTGAC +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINRQWEI*DVIYPD
Trigger: GTCAGGATAGATCACATCCCAGATCTCCCACTGCCT...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACAGGCAGTGGGAGATCTaGGATGTGATCTATCCTGAC +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDRQWEI*DVIYPD
Trigger: GTCAGGATAGATCACATCCCAGATCTCCCACTGCCT...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCAGGCAGTGGGAGATCTaGGATGTGATCTATCCTGAC +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESRQWEI*DVIYPD
Trigger: GTCAGGATAGATCACATCCCAGATCTCCCACTGCCT...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTAGGCAGTGGGAGATCTaGGATGTGATCTATCCTGAC +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGRQWEI*DVIYPD
Trigger: GTCAGGATAGATCACATCCCAGATCTCCCACTGCCT...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACCAGAGGTTTAGGCAGTaGGAGATCTGGGATGTGATC +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDQRFRQ*EIWDVI
Trigger: GATCACATCCCAGATCTCCCACTGCCTAAACCTCTG...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGAGCCCCTCGCTACGTaGAGGGTTCCACCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGEPLAT*RVPPLA
Trigger: AGCAAGAGGTGGAACCCTCCACGTAGCGAGGGGCTC...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGTTGGTTCTTCAAAGCTaGAGCTTGGCAACCAAATGC +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKLVLQS*SLATKC
Trigger: GCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAA...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATAGCCCCAGGGCTGCGTaGGGAACCAAAGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNSPRAA*GTKVSA
Trigger: TGCAGAGACTTTGGTTCCCCACGCAGCCCTGGGGCT...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACCTCCCATCCCAGAAGTaGGATGGCAGTGATAAACCT +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDLPSQK*DGSDKP
Trigger: AGGTTTATCACTGCCATCCCACTTCTGGGATGGGAG...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGCAATGTCATATGAATTaGCCATGGCCAGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKQCHMN*PWPAAE
Trigger: TTCTGCAGCTGGCCATGGCCAATTCATATGACATTG...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATATGACAAATCAGAGGTaGGCTGTGTTTATGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNMTNQR*AVFMVH
Trigger: GTGCACCATAAACACAGCCCACCTCTGATTTGTCAT...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGATGACAAATCAGAGGTaGGCTGTGTTTATGGTGCAC +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKMTNQR*AVFMVH
Trigger: GTGCACCATAAACACAGCCCACCTCTGATTTGTCAT...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCCTTCAGGCTCTATATTaGGGTGGCACTTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESLQALY*GGTSCK
Trigger: CTTGCAGGAAGTGCCACCCCAATATAGAGCCTGAAG...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGTGAGGCCCTGGCAATaGGCAGGAGCCTTGCTGACT +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGVRPWQ*AGALLT
Trigger: AGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCAC...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTAGCTCTGCACAGCACTaGCGAAGGAGGGACGGGCCT +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKASSAQH*RRRDGP
Trigger: AGGCCCGTCCCTCCTTCGCCAGTGCTGTGCAGAGCT...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACGATGTAACATTCACTTaGCCTAGGCACAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDDVTFT*PRHRQV
Trigger: CACCTGCCTGTGCCTAGGCCAAGTGAATGTTACATC...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGATTCTCCTCAGGGAGGTaGCGCCACCTCCATGGCTCA +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGFSSGR*RHLHGS
Trigger: TGAGCCATGGAGGTGGCGCCACCTCCCTGAGGAGAA...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCTGCAGGAGTTTCCTTTaGCCACACCTTTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESCRSFL*PHLSPQ
Trigger: CTGAGGAGAAAGGTGTGGCCAAAGGAAACTCCTGCA...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGATAGCACAAATTCAGTaGAAGAACAGCTGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKIAQIQ*KNSCVD
Trigger: GTCAACACAGCTGTTCTTCCACTGAATTTGTGCTAT...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAAGACAGGTCCTTTTCTaGCAGATTAGAGAATCAACA +
Preference number: 4 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKRQVLF*QIREST
Trigger: TGTTGATTCTCTAATCTGCCAGAAAAGGACCTGTCT...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACAAAAACGTACAGCAGTaGCTATGCCACAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDKNVQQ*LCHRQH
Trigger: GTGCTGCCTGTGGCATAGCCACTGCTGTACGTTTTT...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACTTTCTGGTGAAAAATTaGCAACCACCCCGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINFLVKN*QPPRAQ
Trigger: CTGGGCTCGGGGTGGTTGCCAATTTTTCACCAGAAA...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGACTGGGAATTGTACATaGGGTTTCCAAACAGGACCT +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKTGNCT*GFQTGP
Trigger: AGGTCCTGTTTGGAAACCCCATGTACAATTCCCAGT...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTGAGGTCAGGCCCCGCTaGGAAATGTCCACATCCACA +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAEVRPR*EMSTST
Trigger: TGTGGATGTGGACATTTCTCAGCGGGGCCTGACCTC...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGAGGTCAGGCCCCGCTaGGAAATGTCCACATCCACA +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGEVRPR*EMSTST
Trigger: TGTGGATGTGGACATTTCTCAGCGGGGCCTGACCTC...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGAGGTCAGGCCCCGCTaGGAAATGTCCACATCCACA +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNEVRPR*EMSTST
Trigger: TGTGGATGTGGACATTTCTCAGCGGGGCCTGACCTC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGCTTCTGTTTGGAAATaGGCTGCGCTTCCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGASVWK*AALPLE
Trigger: CTCTAAAGGAAGCGCAGCTCATTTCCAAACAGAAGC...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAATAAACCTAAAAACGTaGGATGCGATGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTINLKT*DAMLSS
Trigger: AGAGGAGAGCATCGCATCTCACGTTTTTAGGTTTAT...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACACTCACAATGTCATATaGATTGGCCATGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINTHNVI*IGHGQL
Trigger: CAGCTGGCCATGGCCAATTCATATGACATTGTGAGT...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGTTAGTATCTGTCTTGTaGCACGAGGCAACTATAAGC +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKLVSVL*HEATIS
Trigger: GCTTATAGTTGCCTCGTGTCACAAGACAGATACTAA...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACGGCAATGCTCCCAGATaGGGCAGTCCTATAAATTAC +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDGNAPR*GSPINY
Trigger: GTAATTTATAGGACTGCCTCATCTGGGAGCATTGCC...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGGGTTTGTTTTGTACCTaGATGTATGAGTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVGLFCT*MYEFSR
Trigger: TCTGGAGAACTCATACATTCAGGTACAAAACAAACC...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTGAGAAAGGTGGGTGGTaGGGTTGGGTCACACCTCCT +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAEKGGW*GWVTPP
Trigger: AGGAGGTGTGACCCAACCTCACCACCCACCTTTCTC...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCGCCTTTTCCAATTTGTaGCTTGAAAATACAACCAGA +
Preference number: 4 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIAFSNL*LENTTR
Trigger: TCTGGTTGTATTTTCAAGTCACAAATTGGAAAAGGC...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGAAATGAAATGGGAATaGAGCAGGTCACAAACTCAG +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNEMKWE*SRSQTQ
Trigger: CTGAGTTTGTGACCTGCTTCATTCCCATTTCATTTC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATACCCCGAGCCCAGAATaGCACCCCTCTTCATCGAGT +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNTPSPE*HPSSSS
Trigger: ACTCGATGAAGAGGGGTGTCATTCTGGGCTCGGGGT...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGTGCAGGGATTCAGCTaGTCGGATGGGAGCAATCCG +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNVQGFS*SDGSNP
Trigger: CGGATTGCTCCCATCCGAGCAGCTGAATCCCTGCAC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGACTCTCGAAGGCTGGCTaGAAAGCTGCTCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGLSKAG*KAARVR
Trigger: CCTGACTCGAGCAGCTTTGCAGCCAGCCTTCGAGAG...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCGGAATCTGCAAAGGTaGTGGAGGGATTTGACATTG +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGRNLQR*WRDLTL
Trigger: CAATGTCAAATCCCTCCAGCACCTTTGCAGATTCCG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACGAGGGTTCCACCTCTTaGTTCTGTTTGGAAATGAGC +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDEGSTS*FCLEMS
Trigger: GCTCATTTCCAAACAGAAGCAAGAGGTGGAACCCTC...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCAAGAACCTGGAAACATaGTCCATTAAATTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSKNLET*SIKFSS
Trigger: GCTGCTGAATTTAATGGAGCATGTTTCCAGGTTCTT...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCCTGCTTCCTTGCTTTTaGTCATGTGTTTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSLLPCF*SCVFHL
Trigger: GAGATGAAAAACACATGAGCAAAAGCAAGGAAGCAG...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCATTTAAATGAGCTCTaGACAGCACTGGCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGHLNEL*TALAKE
Trigger: CTCCTTCGCCAGTGCTGTGCAGAGCTCATTTAAATG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTCCTCGCCCCAGTTTCTaGAGGGAGCAGAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAPRPSF*REQRAS
Trigger: TGAAGCCCTCTGCTCCCTGCAGAAACTGGGGCGAGG...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGTCACAAACTCAGCATaGAGGGCTGGCTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNVTNSA*RAGFPG
Trigger: TCCCGGGAAGCCAGCCCTGCATGCTGAGTTTGTGAC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTCAGGCCTCTTGGTGTTaGAGAGGAGGGGGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAQASWC*RGGGRR
Trigger: TCTCCTACCCCCTCCTCTGCAACACCAAGAGGCCTG...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGCGATCGCAGTCCAGCTaGAACCAAACATGCATGTCT +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKRSQSS*NQTCMS
Trigger: AGACATGCATGTTTGGTTGCAGCTGGACTGCGATCG...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAAGGTGCTGTGGGGGTTaGCTGTGCAGGGATTCAGCT +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGRCCGG*LCRDSA
Trigger: AGCTGAATCCCTGCACAGCCAACCCCCACAGCACCT...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACTGCTCCATTCTAGTGTaGTGGGTGATACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDCSILV*WVIPCD
Trigger: ATCACAGGGTATCACCCACCACACTAGAATGGAGCA...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGCAGTCCTGGAACCCTaGATCTTAAGAAATAGAGAA +
Preference number: 4 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNAVLEP*ILRNRE
Trigger: TTCTCTATTTCTTAAGATCCAGGGTTCCAGGACTGC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTCTGGACAGGAGTTGGTaGCAGTCCTGGAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGALDRSW*QSWNPG
Trigger: TCCAGGGTTCCAGGACTGCCACCAACTCCTGTCCAG...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACTTCAAAGCTGGAGCTTaGCAACCAAATGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDFKAGA*QPNALG
Trigger: ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAA...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATCTCCCACCCCTTCTTTaGACCTGCTCACCCTTCGCA +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNLPPLL*TCSPFA
Trigger: TGCGAAGGGTGAGCAGGTCCAAAGAAGGGGTGGGAG...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCGCACTTCCTGCAAGATaGCGAGTTATATTACTTGTA +
Preference number: 4 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSALPAR*RVILLV
Trigger: TACAAGTAATATAACTCGCCATCTTGCAGGAAGTGC...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCACTCAGGTCTGCCTaGTGGCTGGGAAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNALRSA*WLGSFH
Trigger: ATGGAAGCTTCCCAGCCACCAGGCAGACCTGAGTGC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGAAAAACGTACAGCAGTaGCTATGCCACAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKKNVQQ*LCHRQH
Trigger: GTGCTGCCTGTGGCATAGCCACTGCTGTACGTTTTT...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CAA 72 bp GCTCATGTGTTTTTCATCTCACTGTCTGTCCTGCCATaGACTACAACCCAAAGCCTCAGAGGCACAGAACTT +
Preference number: 4 (lower is better)
Translates to: AHVFFISLSVLP*TTTQSLRGTEL
Trigger: AAGTTCTGTGCCTCTGAGGCTTTGGGTTGTAGTCAATGGCAGGACAGACAGTGAGATGAAAAACACATGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGGAGAAAAGGCACTTTaGGTTCTTGTCAACTTGGGT +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGGEKAL*VLVNLG
Trigger: ACCCAAGTTGACAAGAACTCAAAGTGCCTTTTCTCC...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTAACTCTACAACAGATTaGCAGCGGTCCTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGNSTTD*QRSSNL
Trigger: CAAGTTTGAGGACCGCTGTCAATCTGTTGTAGAGTT...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACCATGAGAGGTGTTTCTaGACTCAGGTTCCTAAACCT +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINHERCF*TQVPKP
Trigger: AGGTTTAGGAACCTGAGTTCAGAAACACCTCTCATG...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACCTAGTACAGCTTCCATaGGAGGTGTTTCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDLVQLP*EVFLNS
Trigger: TGAGTTCAGAAACACCTCTCATGGAAGCTGTACTAG...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTCCTAAGGAAATCCCGTaGGGGCTGCGTTCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAPKEIP*GLRSES
Trigger: GCTCTCAGAACGCAGCCCTCACGGGATTTCCTTAGG...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCAGGAATACATTTAAATaGGCTCTGCACAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESRNTFK*ALHSTG
Trigger: GCCAGTGCTGTGCAGAGCTCATTTAAATGTATTCCT...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTAGGGAAAGATCTAACTaGAGGAAAAAGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGRERSN*RKKLLL
Trigger: GAGGAGGAGCTTTTTCCTTCAGTTAGATCTTTCCCT...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTCTCAGGACGAAACTCTaGGCGGGGCAGTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKALRTKL*AGQCGM
Trigger: CATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAG...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACATTTCAGCTTCATCTCTaGATCTTCCCAATTCATTGG +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTFQLHL*IFPIHW
Trigger: CCAATGAATTGGGAAGATGCAGAGATGAAGCTGAAA...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTTGTTTGGAAATGAGCTaGGCTTCCTTTAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGCLEMS*ASFRDR
Trigger: CCTGTCTCTAAAGGAAGCGCAGCTCATTTCCAAACA...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATCCCTCCTTTCTCTCCTaGTCCTACAACAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNPSFLS*SYNSCP
Trigger: TGGGCAGCTGTTGTAGGAGCAGGAGAGAAAGGAGGG...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTAAGAACCTGGAAACATaGTCCATTAAATTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFKNLET*SIKFSS
Trigger: GCTGCTGAATTTAATGGAGCATGTTTCCAGGTTCTT...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAATTTTCTGCTTGATGTaGAGCAGTCACCTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTIFCLM*SSHLKA
Trigger: AGCTTTTAGGTGACTGCTGCACATCAAGCAGAAAAT...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGTTCAGTACATGCCATaGAGATTTCTGCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGVQYMP*RFLLPC
Trigger: GCAAGGAAGCAGAAATCTGCATGGCATGTACTGAAC...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATAGCTGCAACCAAACATaGATGTCTTCCCGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNSCNQT*MSSRRG
Trigger: GCCACGGCGGGAAGACATGCATGTTTGGTTGCAGCT...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTATCTTCCCAATTCATTaGCCCCCAATACCAACCACA +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGIFPIH*PPIPTT
Trigger: TGTGGTTGGTATTGGGGGCCAATGAATTGGGAAGAT...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTCTGGACAGGAGTTGGTaGCAGTCCTGGAACCCTGGA +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKALDRSW*QSWNPG
Trigger: TCCAGGGTTCCAGGACTGCCACCAACTCCTGTCCAG...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTCAGCTGGACAGGAGTTaGTGGCAGTCCTGGAACCCT +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAQLDRS*WQSWNP
Trigger: AGGGTTCCAGGACTGCCACCAACTCCTGTCCAGCTG...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACTTGGTTCTTCAAAGCTaGAGCTTGGCAACCAAATGC +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDLVLQS*SLATKC
Trigger: GCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAA...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCCCAGCTAAGGCCAATTaGCTAGGTTTTGCCCAATAT +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESPAKAN*LGFAQY
Trigger: ATATTGGGCAAAACCTAGCCAATTGGCCTTAGCTGG...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGAGAAAGAGAGTCCCATaGAACACACGCAAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKRKRVP*NTRKGV
Trigger: GACTCCTTTGCGTGTGTTCCATGGGACTCTCTTTCT...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCTTTCCCAGACCATCTaGTCTACCCTGATCTTATCT +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGLSQTI*STLILS
Trigger: AGATAAGATCAGGGTAGACCAGATGGTCTGGGAAAG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTCCAGGAGGAGAAAGGTaGGTGGTGAGGTTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAPGGER*VVRLGH
Trigger: GTGACCCAACCTCACCACCCACCTTTCTCCTCCTGG...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAAGACAGGTCCTTTTCTaGCAGATTAGAGAATCAACA +
Preference number: 4 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTRQVLF*QIREST
Trigger: TGTTGATTCTCTAATCTGCCAGAAAAGGACCTGTCT...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGACTGAGCGGGGCAGTGTaGTATGTGATGATCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGLSGAV*YVMIPE
Trigger: CTCTGGGATCATCACATACCACACTGCCCCGCTCAG...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAAGGGAGCACCAGAGATaGAGGAGTGAGAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGREHQR*RSESRL
Trigger: AAGCCTGCTCTCACTCCTCCATCTCTGGTGCTCCCT...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
3UTR CAA 72 bp CAAGGATCTCAACAGATTCCAACTTCAGGCTCTATATaGGGGTGGCACTTCCTGCAAGATGGCGAGTTATAT +
Preference number: 4 (lower is better)
Translates to: QGSQQIPTSGSI*GWHFLQDGELY
Trigger: ATATAACTCGCCATCTTGCAGGAAGTGCCACCCCAATATAGAGCCTGAAGTTGGAATCTGTTGAGATCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTATCATCTAGGAGGCTaGGGCTTCTTCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAYHLGG*GFFSEE
Trigger: CTCCTCCGAGAAGAAGCCTCAGCCTCCTAGATGATA...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATCCTGTGATCGGAAACTaGGGCTCAGGATGTAACGAG +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNPVIGN*GSGCNE
Trigger: CTCGTTACATCCTGAGCCTCAGTTTCCGATCACAGG...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGACCTGTGATCGGAAACTaGGGCTCAGGATGTAACGAG +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGPVIGN*GSGCNE
Trigger: CTCGTTACATCCTGAGCCTCAGTTTCCGATCACAGG...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGATGACACCACAGGCTaGAGGTTCCTCTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGDDTTG*RFLCSA
Trigger: AGCACTACAGAGGAACCTTCAGCCTGTGGTGTCATC...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGAACTCTACAACAGATTaGCAGCGGTCCTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKNSTTD*QRSSNL
Trigger: CAAGTTTGAGGACCGCTGTCAATCTGTTGTAGAGTT...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGGATGTGATCTATCCTaGCGAGCTGTCGTATCCGGA +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNGCDLS*RAVVSG
Trigger: TCCGGATACGACAGCTCGTCAGGATAGATCACATCC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTGGGAGATCTGGGATGTaGTCTATCCTGACGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAGRSGM*SILTSC
Trigger: ACAGCTCGTCAGGATAGATCACATCCCAGATCTCCC...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGTGAGGGCTGCGTTCTaGGAGCTTCCTCTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAVRAAF*ELPLGR
Trigger: TCTTCCTAGAGGAAGCTCTCAGAACGCAGCCCTCAC...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACATAAACCTAAAAACGTaGGATGCGATGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDINLKT*DAMLSS
Trigger: AGAGGAGAGCATCGCATCTCACGTTTTTAGGTTTAT...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGACACGCAAAGGAGTCATaGAGACCCAACAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGHAKES*RPNSST
Trigger: AGTGGAGCTGTTGGGTCTTCATGACTCCTTTGCGTG...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACTTAGTATCTGTCTTGTaGCACGAGGCAACTATAAGC +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINLVSVL*HEATIS
Trigger: GCTTATAGTTGCCTCGTGTCACAAGACAGATACTAA...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTTTGTACCTGAATGTATaGGTTCTCCAGAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGLYLNV*VLQKKP
Trigger: GGGTTTCTTCTGGAGAACTCATACATTCAGGTACAA...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGACTGGGACCAGTGCACTaGCACAGACACAGTTCAACA +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGLGPVH*HRHSST
Trigger: TGTTGAACTGTGTCTGTGTCAGTGCACTGGTCCCAG...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGTGAAGGCTCCAATGTaGAAGCAGGGTCTACCACAG +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGVKAPM*KQGLPQ
Trigger: CTGTGGTAGACCCTGCTTTCACATTGGAGCCTTCAC...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATCAGCGCCTGTCTCTATaGTCCAACCCCCATTTCACT +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNQRLSL*SNPHFT
Trigger: AGTGAAATGGGGGTTGGATCATAGAGACAGGCGCTG...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGAGTTCTTGTCAACTTaGGTTTCCTCCCCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNEFLST*VSSPRP
Trigger: TGGACGCGGGGAGGAAACCCAAGTTGACAAGAACTC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATATTCAGCTGCTCGGATaGGAGCAATCCGGGGAAATG +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNIQLLG*EQSGEM
Trigger: CATTTCCCCGGATTGCTCCCATCCGAGCAGCTGAAT...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCGCAGTCCTGGAACCCTaGATCTTAAGAAATAGAGAA +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESAVLEP*ILRNRE
Trigger: TTCTCTATTTCTTAAGATCCAGGGTTCCAGGACTGC...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGCAATGTCATATGAATTaGCCATGGCCAGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKQCHMN*PWPAAE
Trigger: TTCTGCAGCTGGCCATGGCCAATTCATATGACATTG...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGTCTAGAAAACCGCACTaGAAAGGATTCTTTAACCAT +
Preference number: 4 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKSRKPH*KGFFNH
Trigger: ATGGTTAAAGAATCCTTTCCAGTGCGGTTTTCTAGA...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGACTCCTTTGGGCTTTaGGCTCCACCTCACCATCAT +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNDSFGL*APPHHH
Trigger: ATGATGGTGAGGTGGAGCCCAAAGCCCAAAGGAGTC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGATAAACCTAAAAACGTaGGATGCGATGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKINLKT*DAMLSS
Trigger: AGAGGAGAGCATCGCATCTCACGTTTTTAGGTTTAT...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGAGACCAGCAGGATCTaGTCCGGAAATGTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAETSRI*SGNVWV
Trigger: AACCCAGACATTTCCGGATCAGATCCTGCTGGTCTC...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGTTAGTATCTGTCTTGTaGCACGAGGCAACTATAAGC +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKLVSVL*HEATIS
Trigger: GCTTATAGTTGCCTCGTGTCACAAGACAGATACTAA...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTTTTCAGCTTCATCTCTaGATCTTCCCAATTCATTGG +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGFQLHL*IFPIHW
Trigger: CCAATGAATTGGGAAGATGCAGAGATGAAGCTGAAA...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTTTTCAGCTTCATCTCTaGATCTTCCCAATTCATTGG +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGFQLHL*IFPIHW
Trigger: CCAATGAATTGGGAAGATGCAGAGATGAAGCTGAAA...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGTCGTATCCGGAATCTaGAAAGGTGCTGGAGGGATT +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGVVSGI*KGAGGI
Trigger: AATCCCTCCAGCACCTTTGCAGATTCCGGATACGAC...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTGTCGTATCCGGAATCTaGAAAGGTGCTGGAGGGATT +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAVVSGI*KGAGGI
Trigger: AATCCCTCCAGCACCTTTGCAGATTCCGGATACGAC...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTGGCACAAACCCCAACTaGCTTCAAGGTGAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAGTNPN*LQGEFS
Trigger: GGAAAACTCACCTTGAAGGCAGTTGGGGTTTGTGCC...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTTGCTCCTACAACAGCTaGCCATGGCAACAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKACSYNS*PWQQEA
Trigger: TGCCTCTTGTTGCCATGGGCAGCTGTTGTAGGAGCA...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGTTACAGGGGTGTCTaGAGCTATCTCCACACCATC +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGACYRGV*SYLHTI
Trigger: GATGGTGTGGAGATAGCTGCAGACACCCCTGTAACA...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTAGGCAGTGGGAGATCTaGGATGTGATCTATCCTGAC +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGARQWEI*DVIYPD
Trigger: GTCAGGATAGATCACATCCCAGATCTCCCACTGCCT...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGGTGGGCTGTGTTTATaGTGCACAGCTCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNGGLCL*CTAHLV
Trigger: CACAAGATGAGCTGTGCACCATAAACACAGCCCACC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCGCACTTCCTGCAAGATaGCGAGTTATATTACTTGTA +
Preference number: 4 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESALPAR*RVILLV
Trigger: TACAAGTAATATAACTCGCCATCTTGCAGGAAGTGC...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTAGCAGTAGTTGTCACTaGCTCACAGCAGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGASSSCH*LTAAHS
Trigger: AGAGTGAGCTGCTGTGAGCCAGTGACAACTACTGCT...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGATGTAACATTCACTTaGCCTAGGCACAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNDVTFT*PRHRQV
Trigger: CACCTGCCTGTGCCTAGGCCAAGTGAATGTTACATC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTTCCTCAAACTTGGGATaGCACCACAGGCTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKASSNLG*HHRLKV
Trigger: AACCTTCAGCCTGTGGTGTCATCCCAAGTTTGAGGA...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCTTCTGTTTGGAAATaGGCTGCGCTTCCTTTAGAG +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNASVWK*AALPLE
Trigger: CTCTAAAGGAAGCGCAGCTCATTTCCAAACAGAAGC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTGAAACACGATTGCCATaGCAGCTGGCAGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAETRLP*QLAEAI
Trigger: TATTGCTTCTGCCAGCTGTCATGGCAATCGTGTTTC...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTAGAAGAGGTACCACATaGCAAATCAGAGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKARRGTT*QIRGGL
Trigger: CAGCCCACCTCTGATTTGTCATGTGGTACCTCTTCT...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGAAGAACAGCTGTGTTaGCGATTAGAGATAAAAATC +
Preference number: 4 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGEEQLC*RLEIKI
Trigger: GATTTTTATCTCTAATCGTCAACACAGCTGTTCTTC...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGAGGGTTCCACCTCTTaGTTCTGTTTGGAAATGAGC +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNEGSTS*FCLEMS
Trigger: GCTCATTTCCAAACAGAAGCAAGAGGTGGAACCCTC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGCTCTAACAGGGCTGTaGACTGTTCAGTACATGCCA +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAALTGL*TVQYMP
Trigger: TGGCATGTACTGAACAGTGCACAGCCCTGTTAGAGC...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGACATTTAAATGAGCTCTaGACAGCACTGGCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGHLNEL*TALAKE
Trigger: CTCCTTCGCCAGTGCTGTGCAGAGCTCATTTAAATG...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTAGATGGCTACATGTATaGAATAGCACAAATTCAGTG +
Preference number: 4 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGRWLHV*NSTNSV
Trigger: CACTGAATTTGTGCTATTGCATACATGTAGCCATCT...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACAGATGGCTACATGTATaGAATAGCACAAATTCAGTG +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDRWLHV*NSTNSV
Trigger: CACTGAATTTGTGCTATTGCATACATGTAGCCATCT...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTCAGAGGTTTAGGCAGTaGGAGATCTGGGATGTGATC +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAQRFRQ*EIWDVI
Trigger: GATCACATCCCAGATCTCCCACTGCCTAAACCTCTG...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTTCAAAGCTGGAGCTTaGCAACCAAATGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAFKAGA*QPNALG
Trigger: ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAA...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTATCTCAAGGGGCAATaGGTTGAGAGCAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAYLKGQ*VESRGR
Trigger: TCTTCCTCTGCTCTCAACCCATTGCCCCTTGAGATA...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGGAAGAGCACAACTGTaGGAGCTGTATTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGGRAQL*ELYFSP
Trigger: AGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCC...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATAGAAAGAGAGTCCCATaGAACACACGCAAAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNRKRVP*NTRKGV
Trigger: GACTCCTTTGCGTGTGTTCCATGGGACTCTCTTTCT...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTTACAAGGAGGAAGACTaGTCACTCCACGTGGGACTA +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAYKEED*SLHVGL
Trigger: TAGTCCCACGTGGAGTGACCAGTCTTCCTCCTTGTA...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGGAGAAAAGGCACTTTaGGTTCTTGTCAACTTGGGT +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNGEKAL*VLVNLG
Trigger: ACCCAAGTTGACAAGAACTCAAAGTGCCTTTTCTCC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAAACTCTACAACAGATTaGCAGCGGTCCTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGNSTTD*QRSSNL
Trigger: CAAGTTTGAGGACCGCTGTCAATCTGTTGTAGAGTT...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR TCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGAAACACGATTGCCATaGCAGCTGGCAGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAETRLP*QLAEAI
Trigger: TATTGCTTCTGCCAGCTGTCATGGCAATCGTGTTTC...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGAGTACAGTTTGCCATaGAGAACCTGGAAACATGCT +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGEYSLP*RTWKHA
Trigger: AGCATGTTTCCAGGTTCTTCATGGCAAACTGTACTC...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTCTCACTCCTAAGTCATaGGTACAGTTTGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGALTPKS*VQFAMK
Trigger: CTTCATGGCAAACTGTACTCATGACTTAGGAGTGAG...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAAGGAATACATTTAAATaGGCTCTGCACAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGRNTFK*ALHSTG
Trigger: GCCAGTGCTGTGCAGAGCTCATTTAAATGTATTCCT...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGGCCTTTTCCAATTTGTaGCTTGAAAATACAACCAGA +
Preference number: 4 (lower is better)
Translates to: GSHKPDISICLVTRGNYKAFSNL*LENTTR
Trigger: TCTGGTTGTATTTTCAAGTCACAAATTGGAAAAGGC...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACTTTCCATTCTTGGAGTaGATAATGGCTCTCTTAATA +
Preference number: 4 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINFPFLE*IMALLI
Trigger: TATTAAGAGAGCCATTATGCACTCCAAGAATGGAAA...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACTTTCCATTCTTGGAGTaGATAATGGCTCTCTTAATA +
Preference number: 4 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDFPFLE*IMALLI
Trigger: TATTAAGAGAGCCATTATGCACTCCAAGAATGGAAA...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTCGGAATCTGCAAAGGTaGTGGAGGGATTTGACATTG +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKARNLQR*WRDLTL
Trigger: CAATGTCAAATCCCTCCAGCACCTTTGCAGATTCCG...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATTGTTTGGAAATGAGCTaGGCTTCCTTTAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNCLEMS*ASFRDR
Trigger: CCTGTCTCTAAAGGAAGCGCAGCTCATTTCCAAACA...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR GCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGGAACCAAAGTCTCTaGACAGAGAATCCCAACCTT +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAGNQSL*TENPNL
Trigger: AAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCC...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATCCAGCTAAGGCCAATTaGCTAGGTTTTGCCCAATAT +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNPAKAN*LGFAQY
Trigger: ATATTGGGCAAAACCTAGCCAATTGGCCTTAGCTGG...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATCTTTCCCAGACCATCTaGTCTACCCTGATCTTATCT +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNLSQTI*STLILS
Trigger: AGATAAGATCAGGGTAGACCAGATGGTCTGGGAAAG...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATCTTAGGAATCAACAGTaGGTCCCTAGATGTAAGCCT +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNLRNQQ*VPRCKP
Trigger: AGGCTTACATCTAGGGACCCACTGTTGATTCCTAAG...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGACTTAGGAATCAACAGTaGGTCCCTAGATGTAAGCCT +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGLRNQQ*VPRCKP
Trigger: AGGCTTACATCTAGGGACCCACTGTTGATTCCTAAG...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTTGTTTGGAAATGAGCTaGGCTTCCTTTAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKACLEMS*ASFRDR
Trigger: CCTGTCTCTAAAGGAAGCGCAGCTCATTTCCAAACA...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTATCTTCCCAATTCATTaGCCCCCAATACCAACCACA +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAIFPIH*PPIPTT
Trigger: TGTGGTTGGTATTGGGGGCCAATGAATTGGGAAGAT...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTGCAGTCCTGGAACCCTaGATCTTAAGAAATAGAGAA +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAAVLEP*ILRNRE
Trigger: TTCTCTATTTCTTAAGATCCAGGGTTCCAGGACTGC...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCAGTCCTGGAACCCTaGATCTTAAGAAATAGAGAA +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNAVLEP*ILRNRE
Trigger: TTCTCTATTTCTTAAGATCCAGGGTTCCAGGACTGC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTACTGGGAATTGTACATaGGGTTTCCAAACAGGACCT +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKATGNCT*GFQTGP
Trigger: AGGTCCTGTTTGGAAACCCCATGTACAATTCCCAGT...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTTTGTACCTGAATGTATaGGTTCTCCAGAAGAAACCC +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKALYLNV*VLQKKP
Trigger: GGGTTTCTTCTGGAGAACTCATACATTCAGGTACAA...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR TCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTGGTTTGTTTTGTACCTaGATGTATGAGTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAGLFCT*MYEFSR
Trigger: TCTGGAGAACTCATACATTCAGGTACAAAACAAACC...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAATTTTCTGCTTGATGTaGAGCAGTCACCTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGIFCLM*SSHLKA
Trigger: AGCTTTTAGGTGACTGCTGCACATCAAGCAGAAAAT...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATATAGCACAAATTCAGTaGAAGAACAGCTGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNIAQIQ*KNSCVD
Trigger: GTCAACACAGCTGTTCTTCCACTGAATTTGTGCTAT...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTCTCCCCAAAAAGACATaGGTAGGTACAGCAATCATA +
Preference number: 4 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKALPKKT*VGTAII
Trigger: TATGATTGCTGTACCTACCCATGTCTTTTTGGGGAG...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CCA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTCTAGAAAACCGCACTaGAAAGGATTCTTTAACCAT +
Preference number: 4 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGASRKPH*KGFFNH
Trigger: ATGGTTAAAGAATCCTTTCCAGTGCGGTTTTCTAGA...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR GCA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATTTTCCATTCTTGGAGTaGATAATGGCTCTCTTAATA +
Preference number: 4 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNFPFLE*IMALLI
Trigger: TATTAAGAGAGCCATTATGCACTCCAAGAATGGAAA...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS CCA 90 bp CCGGGCCCCAGGTCCGCTCGAGCGCCAAGCCCGGCGGCAGGGCCTTaGGGTCCAGGGCACAGCGGTGCCGGGGACACAGCAGTTCCGAGG +
Preference number: 5 (lower is better)
Translates to: PGPRSARAPSPAAGP*GPGHSGAGDTAVPR
Trigger: CCTCGGAACTGCTGTGTCCCCGGCACCGCTGTGCCCTGGACCCCAAGGCCCTGCCGCCGGGCTTGGCGCTCGAGCGGACCTGGGGCCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS TCA 90 bp CAGCTCCCGGCCCGCAGAGCCTCCCATGTCTGTCAGGCTCGCAGCTaGAGCAGCCAGCTCTCCAGAAGGCCTCTTGCCGGTCCCATCCCC +
Preference number: 5 (lower is better)
Translates to: QLPARRASHVCQARS*SSQLSRRPLAGPIP
Trigger: GGGGATGGGACCGGCAAGAGGCCTTCTGGAGAGCTGGCTGCTTCAGCTGCGAGCCTGACAGACATGGGAGGCTCTGCGGGCCGGGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000631449.1
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGTCTCCAGAAGGCCTCTaGCCGGTCCCATCCCCACCG +
Preference number: 5 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLSPEGL*PVPSPP
Trigger: CGGTGGGGATGGGACCGGCAAGAGGCCTTCTGGAGA...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGGAGGTGCTGTGGGGGTaGGCTGTGCAGGGATTCAGC +
Preference number: 5 (lower is better)
Translates to: ADHSEALAMGRSLADSFGEVLWG*AVQGFS
Trigger: GCTGAATCCCTGCACAGCCAACCCCCACAGCACCTC...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS GCA 90 bp GGGACACTGGAGGTGCTGTGGGGGTTGGCTGTGCAGGGATTCAGCTaGTCGGATGGGAGCAATCCGGGGAAATGCATCTGTGAACAGGGG +
Preference number: 5 (lower is better)
Translates to: GTLEVLWGLAVQGFS*SDGSNPGKCICEQG
Trigger: CCCCTGTTCACAGATGCATTTCCCCGGATTGCTCCCATCCGAGCAGCTGAATCCCTGCACAGCCAACCCCCACAGCACCTCCAGTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617765.1
ENST00000632687.1
CDS CCA 90 bp GAGGCTGAGGCTTCTTCTCGGAGGAGGAGGGGGAGTTGGAGGGTGTaGAGAGGTCAGGCCCCGCTGAGAAATGTCCACATCCACAAGCGA +
Preference number: 5 (lower is better)
Translates to: EAEASSRRRRGSWRV*RGQAPLRNVHIHKR
Trigger: TCGCTTGTGGATGTGGACATTTCTCAGCGGGGCCTGACCTCTCCACACCCTCCAACTCCCCCTCCTCCTCCGAGAAGAAGCCTCAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000631449.1
ENST00000631692.1
ENST00000665913.1
CDS CCA 90 bp AAAGCTGCTCGAGTCAGGCCGGTAGAGGGGACACTGGAGGTGCTGTaGGGGTTGGCTGTGCAGGGATTCAGCTGCTCGGATGGGAGCAAT +
Preference number: 5 (lower is better)
Translates to: KAARVRPVEGTLEVL*GLAVQGFSCSDGSN
Trigger: ATTGCTCCCATCCGAGCAGCTGAATCCCTGCACAGCCAACCCCCACAGCACCTCCAGTGTCCCCTCTACCGGCCTGACTCGAGCAGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000617765.1
ENST00000631449.1
ENST00000631692.1
ENST00000632687.1
ENST00000665913.1
CDS-3UTR CAA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAGCCTTGCTGACTCCTTaGGGCTTTGGGCTCCACCTC +
Preference number: 5 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPALLTP*GFGLHL
Trigger: GAGGTGGAGCCCAAAGCCCAAAGGAGTCAGCAAGGC...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS GCA 90 bp TGGCCCCCAATACCAACCACACTTCTCCAACTCTCGAAGGCTGGCTaGAAAGCTGCTCGAGTCAGGCCGGTAGAGGGGACACTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: WPPIPTTLLQLSKAG*KAARVRPVEGTLEV
Trigger: CACCTCCAGTGTCCCCTCTACCGGCCTGACTCGAGCAGCTTTGCAGCCAGCCTTCGAGAGTTGGAGAAGTGTGGTTGGTATTGGGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000617765.1
ENST00000631449.1
ENST00000631692.1
ENST00000632687.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGCAACCAAATGCCCTaGGTGGTGACCAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLGNQMP*VVTSRE
Trigger: CTCCCTGCTGGTCACCACCAAGGGCATTTGGTTGCC...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAGTCCCAAAGAGCCGGTaGCCACCCACTTACCTAGTG +
Preference number: 5 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPVPKSR*PPTYLV
Trigger: CACTAGGTAAGTGGGTGGCAACCGGCTCTTTGGGAC...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCGCCCCTCCAGGCCTCTaGGTGTTGCAGAGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIAPPGL*VLQRRG
Trigger: CCCCCTCCTCTGCAACACCAAGAGGCCTGGAGGGGC...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACGAGGTGCTGTGGGGGTaGGCTGTGCAGGGATTCAGC +
Preference number: 5 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNEVLWG*AVQGFS
Trigger: GCTGAATCCCTGCACAGCCAACCCCCACAGCACCTC...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGGCCCCTCCAGGCCTCTaGGTGTTGCAGAGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVAPPGL*VLQRRG
Trigger: CCCCCTCCTCTGCAACACCAAGAGGCCTGGAGGGGC...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCTCTCCAGAAGGCCTCTaGCCGGTCCCATCCCCACCG +
Preference number: 5 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSSPEGL*PVPSPP
Trigger: CGGTGGGGATGGGACCGGCAAGAGGCCTTCTGGAGA...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCGCAGCTGGACAGGAGTaGGTGGCAGTCCTGGAACCC +
Preference number: 5 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIAAGQE*VAVLEP
Trigger: GGGTTCCAGGACTGCCACCAACTCCTGTCCAGCTGC...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGCAGCTGGACAGGAGTaGGTGGCAGTCCTGGAACCC +
Preference number: 5 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKAAGQE*VAVLEP
Trigger: GGGTTCCAGGACTGCCACCAACTCCTGTCCAGCTGC...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAAGGTGCTGGAGGGATTaGACATTGCTGAATCGGGAC +
Preference number: 5 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPRCWRD*TLLNRD
Trigger: GTCCCGATTCAGCAATGTCAAATCCCTCCAGCACCT...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACGCCTTGCTGACTCCTTaGGGCTTTGGGCTCCACCTC +
Preference number: 5 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNALLTP*GFGLHL
Trigger: GAGGTGGAGCCCAAAGCCCAAAGGAGTCAGCAAGGC...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GAGCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGTCTTGCGCTGCTGTTTaGCAGCCCACTCCACAGAGA +
Preference number: 5 (lower is better)
Translates to: ELTIVRPWQWAGALLTPLSCAAV*QPTPQR
Trigger: TCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAAGA...CAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCATTGGCCAAGCTGGTCTaGAACTCCCGACCTCATGAT +
Preference number: 5 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPLAKLV*NSRPHD
Trigger: ATCATGAGGTCGGGAGTTCAAGACCAGCTTGGCCAA...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGCTTTCTGGTGAAAAATaGGCAACCACCCCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: ADHSEALAMGRSLADSFGLSGEK*ATTPSP
Trigger: TGGGCTCGGGGTGGTTGCCAATTTTTCACCAGAAAG...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGTCTCCAGAAGGCCTCTaGCCGGTCCCATCCCCACCG +
Preference number: 5 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKSPEGL*PVPSPP
Trigger: CGGTGGGGATGGGACCGGCAAGAGGCCTTCTGGAGA...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGTGGAGGGATTTGACATaGCTGAATCGGGACACTGGA +
Preference number: 5 (lower is better)
Translates to: ADHSEALAMGRSLADSFGWRDLT*LNRDTG
Trigger: TCCAGTGTCCCGATTCAGCAATGTCAAATCCCTCCA...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGGTGCACAGCTCATCTaGTGGGCCACCCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKGAQLI*WATLPQ
Trigger: CTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACC...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACCTGTCTGTCCTGCCATaGACTACAACCCAAAGCCTC +
Preference number: 5 (lower is better)
Translates to: LPLTALCKATHAGTKHPHLSVLP*TTTQSL
Trigger: GAGGCTTTGGGTTGTAGTCAATGGCAGGACAGACAG...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS GCA 90 bp GGTGACCAGCAGGGAGCCCCTCGCTACGTGGAGGGTTCCACCTCTTaGTTCTGTTTGGAAATGAGCTGCGCTTCCTTTAGAGACAGGTAT +
Preference number: 5 (lower is better)
Translates to: GDQQGAPRYVEGSTS*FCLEMSCASFRDRY
Trigger: ATACCTGTCTCTAAAGGAAGCGCAGCTCATTTCCAAACAGAAGCAAGAGGTGGAACCCTCCACGTAGCGAGGGGCTCCCTGCTGGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS CCA 90 bp GGAGGTGCTGTGGGGGTTGGCTGTGCAGGGATTCAGCTGCTCGGATaGGAGCAATCCGGGGAAATGCATCTTACTAAGGTGACTACTTCA +
Preference number: 5 (lower is better)
Translates to: GGAVGVGCAGIQLLG*EQSGEMHLTKVTTS
Trigger: TGAAGTAGTCACCTTAGTAAGATGCATTTCCCCGGATTGCTCCCATCCGAGCAGCTGAATCCCTGCACAGCCAACCCCCACAGCACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617360.1
ENST00000631449.1
CDS-3UTR CAA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAGAGGTGCTGTGGGGGTaGGCTGTGCAGGGATTCAGC +
Preference number: 5 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTEVLWG*AVQGFS
Trigger: GCTGAATCCCTGCACAGCCAACCCCCACAGCACCTC...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACCATCTTCCCAATTCATaGGCCCCCAATACCAACCAC +
Preference number: 5 (lower is better)
Translates to: LPLTALCKATHAGTKHPHHLPNS*APNTNH
Trigger: GTGGTTGGTATTGGGGGCCAATGAATTGGGAAGATG...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATGCAGCTGGACAGGAGTaGGTGGCAGTCCTGGAACCC +
Preference number: 5 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNAAGQE*VAVLEP
Trigger: GGGTTCCAGGACTGCCACCAACTCCTGTCCAGCTGC...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGAAGGTGCTGGAGGGATTaGACATTGCTGAATCGGGAC +
Preference number: 5 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRRCWRD*TLLNRD
Trigger: GTCCCGATTCAGCAATGTCAAATCCCTCCAGCACCT...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGGAGCTCAGGACGAAACTCTGAGCGGGGCAGTGTGGTATGTGATGATCCCAGACTTCAAAGCTGGAGCTaGGCAACCAAATGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GSSGRNSERGSVVCDDPRLQSWS*ATKCPW
Trigger: CCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAG...TCTGGGATCATCACATACCACACTGCCCCGCTCAGAGTTTCGTCCTGAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACACTCTAACTCTGCCTTaGGCACCAGCTGAATGGCCG +
Preference number: 5 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNTLTLP*APAEWP
Trigger: CGGCCATTCAGCTGGTGCCAAAGGCAGAGTTAGAGT...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGGAACTCCCAGTCCTTaGCAAACCTCAAGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKGTPSP*QTSSPS
Trigger: GGAGGGGCTTGAGGTTTGCAAAGGACTGGGAGTTCC...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAAGGTGGGTGGTGAGGTaGGGTCACACCTCCTCAGTT +
Preference number: 5 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKRWVVR*GHTSSV
Trigger: AACTGAGGAGGTGTGACCCAACCTCACCACCCACCT...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGAGGTGGGTGGTGAGGTaGGGTCACACCTCCTCAGTT +
Preference number: 5 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKRWVVR*GHTSSV
Trigger: AACTGAGGAGGTGTGACCCAACCTCACCACCCACCT...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCGGCGGCCGACCCACGTaGCGGAACACCATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESGGRPT*RNTISC
Trigger: GCAGCTGATGGTGTTCCGCAACGTGGGTCGGCCGCC...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612932.6
ENST00000665913.1
CDS-3UTR CAA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACGGCGGCCGACCCACGTaGCGGAACACCATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDGGRPT*RNTISC
Trigger: GCAGCTGATGGTGTTCCGCAACGTGGGTCGGCCGCC...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000631692.1
ENST00000665913.1
CDS CCA 90 bp TCTGCAAAGGTGCTGGAGGGATTTGACATTGCTGAATCGGGACACTaGATAGAGCAGCTGGACAGGAGTTGGTGGCAGTCCTGGAACCCT +
Preference number: 5 (lower is better)
Translates to: SAKVLEGFDIAESGH*IEQLDRSWWQSWNP
Trigger: AGGGTTCCAGGACTGCCACCAACTCCTGTCCAGCTGCTCTATCCAGTGTCCCGATTCAGCAATGTCAAATCCCTCCAGCACCTTTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGCGACTGAGGCGGATTTaGAAGGAGCCCTTCCGAGAA +
Preference number: 5 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKRLRRI*KEPFRE
Trigger: TTCTCGGAAGGGCTCCTTCAAAATCCGCCTCAGTCG...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACACCACCGTTGCAGCTCTaGGTGCGAAAGAGGCGACTG +
Preference number: 5 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTPPLQL*VRKRRL
Trigger: CAGTCGCCTCTTTCGCACCAAGAGCTGCAACGGTGG...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTTCTCCAGAAGGCCTCTaGCCGGTCCCATCCCCACCG +
Preference number: 5 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGSPEGL*PVPSPP
Trigger: CGGTGGGGATGGGACCGGCAAGAGGCCTTCTGGAGA...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAGGCAACCAAATGCCCTaGGTGGTGACCAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTGNQMP*VVTSRE
Trigger: CTCCCTGCTGGTCACCACCAAGGGCATTTGGTTGCC...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAACTCTAACTCTGCCTTaGGCACCAGCTGAATGGCCG +
Preference number: 5 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKTLTLP*APAEWP
Trigger: CGGCCATTCAGCTGGTGCCAAAGGCAGAGTTAGAGT...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GCTGACCATAGTGAGGCCCTGGCAATGGGCAGGAGCCTTGCTGACTCCTTTGGGGTCACACCTCCTCAGTaGGTTTGTTTTGTACCTGAA +
Preference number: 5 (lower is better)
Translates to: ADHSEALAMGRSLADSFGVTPPQ*VCFVPE
Trigger: TTCAGGTACAAAACAAACCAACTGAGGAGGTGTGAC...CCCAAAGGAGTCAGCAAGGCTCCTGCCCATTGCCAGGGCCTCACTATGGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGGAAGACTGTCTCCTCTaGCGCTGCTGTTTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKEDCLL*RCCFAA
Trigger: GGCTGCAAAACAGCAGCGCAAGAGGAGACAGTCTTC...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCACTTTATCCCAGTGTCTaGTCCACTAACTTTAGGGCT +
Preference number: 5 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPLYPSV*STNFRA
Trigger: AGCCCTAAAGTTAGTGGACAAGACACTGGGATAAAG...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCAACTGCTCCCAAGACTTaGCTCTCCATTTTATCAAGG +
Preference number: 5 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPTAPKT*LSILSR
Trigger: CCTTGATAAAATGGAGAGCAAAGTCTTGGGAGCAGT...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGCGACTGAGGCGGATTTaGAAGGAGCCCTTCCGAGAA +
Preference number: 5 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVRLRRI*KEPFRE
Trigger: TTCTCGGAAGGGCTCCTTCAAAATCCGCCTCAGTCG...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCAGGCACTTTGAGTTCTaGTCAACTTGGGTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPRHFEF*STWVSS
Trigger: GGAGGAAACCCAAGTTGACAAGAACTCAAAGTGCCT...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGAGGTGCTGTGGGGGTaGGCTGTGCAGGGATTCAGC +
Preference number: 5 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGEVLWG*AVQGFS
Trigger: GCTGAATCCCTGCACAGCCAACCCCCACAGCACCTC...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGCAGCTGGACAGGAGTaGGTGGCAGTCCTGGAACCC +
Preference number: 5 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGAAGQE*VAVLEP
Trigger: GGGTTCCAGGACTGCCACCAACTCCTGTCCAGCTGC...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp TTGGACCTGCTCACCCTTCGCACCACTTTCAATCCAACGGGCACAAACCCCAACTGGAGGGATTTGACATaGCTGAATCGGGACACTGGA +
Preference number: 5 (lower is better)
Translates to: LDLLTLRTTFNPTGTNPNWRDLT*LNRDTG
Trigger: TCCAGTGTCCCGATTCAGCAATGTCAAATCCCTCCA...GTTGGGGTTTGTGCCCGTTGGATTGAAAGTGGTGCGAAGGGTGAGCAGGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACCCTCCCACCCCTTCTTaGGACCTGCTCACCCTTCGC +
Preference number: 5 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDPPTPS*DLLTLR
Trigger: GCGAAGGGTGAGCAGGTCCAAAGAAGGGGTGGGAGG...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCCTCCCACCCCTTCTTaGGACCTGCTCACCCTTCGC +
Preference number: 5 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGPPTPS*DLLTLR
Trigger: GCGAAGGGTGAGCAGGTCCAAAGAAGGGGTGGGAGG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CTTCCCCTAACTGCTCTGTGCAAGGCCACCCATGCAGGCACCAAACACCCACACTCCTTGATTTTCTGCTaGATGTGCAGCAGTCACCTA +
Preference number: 5 (lower is better)
Translates to: LPLTALCKATHAGTKHPHSLIFC*MCSSHL
Trigger: TAGGTGACTGCTGCACATCAAGCAGAAAATCAAGGA...GTGTGGGTGTTTGGTGCCTGCATGGGTGGCCTTGCACAGAGCAGTTAGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGGTCCCAAAGAGCCGGTaGCCACCCACTTACCTAGTG +
Preference number: 5 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKVPKSR*PPTYLV
Trigger: CACTAGGTAAGTGGGTGGCAACCGGCTCTTTGGGAC...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp AGGGGTGGGTGTGAGGTGGAGCCCCACGCAGAGTACGGTCATGTGCTTCTTCCACCACCCCATTTAAGATaGGCCTGCAAGTCTATTTTA +
Preference number: 5 (lower is better)
Translates to: RGGCEVEPHAEYGHVLLPPPHLR*ACKSIL
Trigger: TAAAATAGACTTGCAGGCCAATCTTAAATGGGGTGG...TGGAAGAAGCACATGACCGTACTCTGCGTGGGGCTCCACCTCACACCCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS TCA 90 bp GGGCTTCACCAGCCTAGAGCGATTCCAACTTCTCCCACCTCGAAGTaGAGTGCCGATAAGGCAGCCTTGGAAATAGTGACTCGCTTACTT +
Preference number: 5 (lower is better)
Translates to: GLHQPRAIPTSPTSK*SADKAALEIVTRLL
Trigger: AAGTAAGCGAGTCACTATTTCCAAGGCTGCCTTATCGGCACTTCACTTCGAGGTGGGAGAAGTTGGAATCGCTCTAGGCTGGTGAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617360.1
ENST00000631449.1
CDS-3UTR CAA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGGCAACCAAATGCCCTaGGTGGTGACCAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGGNQMP*VVTSRE
Trigger: CTCCCTGCTGGTCACCACCAAGGGCATTTGGTTGCC...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGCTTCAAAGCTGGAGCTaGGCAACCAAATGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVLQSWS*ATKCPW
Trigger: CCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAG...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGGTGCACAGCTCATCTaGTGGGCCACCCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGGAQLI*WATLPQ
Trigger: CTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACC...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCGGCGAGTTATATTACTaGTACTCTCACGAGGCAACA +
Preference number: 5 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPGELYY*YSHEAT
Trigger: TGTTGCCTCGTGAGAGTACAAGTAATATAACTCGCC...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACGCCTTGCTGACTCCTTaGGGCTTTGGGCTCCACCTC +
Preference number: 5 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDALLTP*GFGLHL
Trigger: GAGGTGGAGCCCAAAGCCCAAAGGAGTCAGCAAGGC...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCCAGGGACGTGCAGACTaGACCTTTGTGACCCAATCA +
Preference number: 5 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSQGRAD*TFVTQS
Trigger: TGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTG...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGCATCTTCCCAATTCATaGGCCCCCAATACCAACCAC +
Preference number: 5 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVHLPNS*APNTNH
Trigger: GTGGTTGGTATTGGGGGCCAATGAATTGGGAAGATG...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCAAACTCTACAACAGATaGACAGCGGTCCTCAAACTT +
Preference number: 5 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPKLYNR*TAVLKL
Trigger: AAGTTTGAGGACCGCTGTCAATCTGTTGTAGAGTTT...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp TTTATGGTGCACAGCTCATCTTGTGGGCCACCCTTCCACAGTCAGGTAATGGTGTGGAGGGATTTGACATaGCTGAATCGGGACACTGGA +
Preference number: 5 (lower is better)
Translates to: FMVHSSSCGPPFHSQVMVWRDLT*LNRDTG
Trigger: TCCAGTGTCCCGATTCAGCAATGTCAAATCCCTCCA...CACCATTACCTGACTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACCATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTAGGTGCTGGAGGGATTaGACATTGCTGAATCGGGAC +
Preference number: 5 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFRCWRD*TLLNRD
Trigger: GTCCCGATTCAGCAATGTCAAATCCCTCCAGCACCT...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACGGAACTCCCAGTCCTTaGCAAACCTCAAGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDGTPSP*QTSSPS
Trigger: GGAGGGGCTTGAGGTTTGCAAAGGACTGGGAGTTCC...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp ACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAAGAAAATACAGAAGCCCTaGCTACCTCCCATCCCAGAA +
Preference number: 5 (lower is better)
Translates to: TSALTQTQFNTTLPRRRKKIQKP*LPPIPE
Trigger: TTCTGGGATGGGAGGTAGCAAGGGCTTCTGTATTTT...CTTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGGGTGCACAGCTCATCTaGTGGGCCACCCTTCCACAG +
Preference number: 5 (lower is better)
Translates to: GSHKPDISICLVTRGNYKGAQLI*WATLPQ
Trigger: CTGTGGAAGGGTGGCCCACAAGATGAGCTGTGCACC...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCCTCCAGGCCTCTaGGTGTTGCAGAGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNAPPGL*VLQRRG
Trigger: CCCCCTCCTCTGCAACACCAAGAGGCCTGGAGGGGC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATCTTTCTGGTGAAAAATaGGCAACCACCCCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNLSGEK*ATTPSP
Trigger: TGGGCTCGGGGTGGTTGCCAATTTTTCACCAGAAAG...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACACTTTCTGGTGAAAAATaGGCAACCACCCCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTLSGEK*ATTPSP
Trigger: TGGGCTCGGGGTGGTTGCCAATTTTTCACCAGAAAG...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGCTGCGTGGGGAACCAAAGTCTCTGCACAGAGAATCCCAACCTTCCTGTTCCCCCACCCCATTTAAGATaGGCCTGCAAGTCTATTTTA +
Preference number: 5 (lower is better)
Translates to: GCVGNQSLCTENPNLPVPPPHLR*ACKSIL
Trigger: TAAAATAGACTTGCAGGCCAATCTTAAATGGGGTGG...GGGAACAGGAAGGTTGGGATTCTCTGTGCAGAGACTTTGGTTCCCCACGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTCGACTGAGGCGGATTTaGAAGGAGCCCTTCCGAGAA +
Preference number: 5 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGRLRRI*KEPFRE
Trigger: TTCTCGGAAGGGCTCCTTCAAAATCCGCCTCAGTCG...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTCGACTGAGGCGGATTTaGAAGGAGCCCTTCCGAGAA +
Preference number: 5 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGRLRRI*KEPFRE
Trigger: TTCTCGGAAGGGCTCCTTCAAAATCCGCCTCAGTCG...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGATCTCCAGAAGGCCTCTaGCCGGTCCCATCCCCACCG +
Preference number: 5 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGSPEGL*PVPSPP
Trigger: CGGTGGGGATGGGACCGGCAAGAGGCCTTCTGGAGA...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGCATCTTCCCAATTCATaGGCCCCCAATACCAACCAC +
Preference number: 5 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKHLPNS*APNTNH
Trigger: GTGGTTGGTATTGGGGGCCAATGAATTGGGAAGATG...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACACTCTAACTCTGCCTTaGGCACCAGCTGAATGGCCG +
Preference number: 5 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINTLTLP*APAEWP
Trigger: CGGCCATTCAGCTGGTGCCAAAGGCAGAGTTAGAGT...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCACAATGTCATATGAATaGGCCATGGCCAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSTMSYE*AMASCR
Trigger: TCTGCAGCTGGCCATGGCCAATTCATATGACATTGT...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CTCCCTAATTCTTCCTGGATGTCTGTTACAGGGGTGTCTGCAGCTATCTCCACAACTTCAGGCTCTATATaGGGGTGGCACTTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: LPNSSWMSVTGVSAAISTTSGSI*GWHFLQ
Trigger: TTGCAGGAAGTGCCACCCCAATATAGAGCCTGAAGT...TGTGGAGATAGCTGCAGACACCCCTGTAACAGACATCCAGGAAGAATTAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGACTTCAGGCTCTATATaGGGGTGGCACTTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKTSGSI*GWHFLQ
Trigger: TTGCAGGAAGTGCCACCCCAATATAGAGCCTGAAGT...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GACCAGTGCACTGACACAGACACAGTTCAACACGACACTCCCCAGGAGGAGAAATCCTTGATTTTCTGCTaGATGTGCAGCAGTCACCTA +
Preference number: 5 (lower is better)
Translates to: DQCTDTDTVQHDTPQEEKSLIFC*MCSSHL
Trigger: TAGGTGACTGCTGCACATCAAGCAGAAAATCAAGGA...TTTCTCCTCCTGGGGAGTGTCGTGTTGAACTGTGTCTGTGTCAGTGCACTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTTCTTGCGCTGCTGTTTaGCAGCCCACTCCACAGAGA +
Preference number: 5 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGSCAAV*QPTPQR
Trigger: TCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAAGA...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TACCATGATCAGAGTGACATGTACAGTTATCTCAAGGGGCAATGGGTTGAGAGCTCTTGCGCTGCTGTTTaGCAGCCCACTCCACAGAGA +
Preference number: 5 (lower is better)
Translates to: YHDQSDMYSYLKGQWVESSCAAV*QPTPQR
Trigger: TCTCTGTGGAGTGGGCTGCAAAACAGCAGCGCAAGA...GCTCTCAACCCATTGCCCCTTGAGATAACTGTACATGTCACTCTGATCATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGAAGACTGTCTCCTCTaGCGCTGCTGTTTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGEDCLL*RCCFAA
Trigger: GGCTGCAAAACAGCAGCGCAAGAGGAGACAGTCTTC...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGGTCCCAAAGAGCCGGTaGCCACCCACTTACCTAGTG +
Preference number: 5 (lower is better)
Translates to: GSHKPDISICLVTRGNYKVPKSR*PPTYLV
Trigger: CACTAGGTAAGTGGGTGGCAACCGGCTCTTTGGGAC...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGCGGCCGACCCACGTaGCGGAACACCATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAGGRPT*RNTISC
Trigger: GCAGCTGATGGTGTTCCGCAACGTGGGTCGGCCGCC...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCAAACTCTACAACAGATaGACAGCGGTCCTCAAACTT +
Preference number: 5 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIKLYNR*TAVLKL
Trigger: AAGTTTGAGGACCGCTGTCAATCTGTTGTAGAGTTT...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCAGAAACTTTCCATTCTaGGAGTGCATAATGGCTCTC +
Preference number: 5 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPIRNFPF*ECIMAL
Trigger: GAGAGCCATTATGCACTCCAAGAATGGAAAGTTTCT...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCAGCTGGACAGGAGTaGGTGGCAGTCCTGGAACCC +
Preference number: 5 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGAAGQE*VAVLEP
Trigger: GGGTTCCAGGACTGCCACCAACTCCTGTCCAGCTGC...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACAGGTGCTGGAGGGATTaGACATTGCTGAATCGGGAC +
Preference number: 5 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDRCWRD*TLLNRD
Trigger: GTCCCGATTCAGCAATGTCAAATCCCTCCAGCACCT...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTCTTCAAAGCTGGAGCTaGGCAACCAAATGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGLQSWS*ATKCPW
Trigger: CCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAG...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGACAATGTCATATGAATaGGCCATGGCCAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKTMSYE*AMASCR
Trigger: TCTGCAGCTGGCCATGGCCAATTCATATGACATTGT...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp AAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCATTTACAATGTCATATGAATaGGCCATGGCCAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: KQGLPQGRADLTFVTQSFTMSYE*AMASCR
Trigger: TCTGCAGCTGGCCATGGCCAATTCATATGACATTGT...AAATGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTCTGTCTGTCCTGCCATaGACTACAACCCAAAGCCTC +
Preference number: 5 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGLSVLP*TTTQSL
Trigger: GAGGCTTTGGGTTGTAGTCAATGGCAGGACAGACAG...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCCTTTATCCCAGTGTCTaGTCCACTAACTTTAGGGCT +
Preference number: 5 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSLYPSV*STNFRA
Trigger: AGCCCTAAAGTTAGTGGACAAGACACTGGGATAAAG...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACCAGGGACGTGCAGACTaGACCTTTGTGACCCAATCA +
Preference number: 5 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDQGRAD*TFVTQS
Trigger: TGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTG...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CTCACAGCAGCTCACTCTCAACCTGAGGAAGGTTACAGTAGATCAGTCATAAACCAGGGACGTGCAGACTaGACCTTTGTGACCCAATCA +
Preference number: 5 (lower is better)
Translates to: LTAAHSQPEEGYSRSVINQGRAD*TFVTQS
Trigger: TGATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTG...GTTTATGACTGATCTACTGTAACCTTCCTCAGGTTGAGAGTGAGCTGCTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATCCACCGTTGCAGCTCTaGGTGCGAAAGAGGCGACTG +
Preference number: 5 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNPPLQL*VRKRRL
Trigger: CAGTCGCCTCTTTCGCACCAAGAGCTGCAACGGTGG...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGAGGTGCTGTGGGGGTaGGCTGTGCAGGGATTCAGC +
Preference number: 5 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAEVLWG*AVQGFS
Trigger: GCTGAATCCCTGCACAGCCAACCCCCACAGCACCTC...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GCCCGCCTACTCCTGTGCTACCAACATAGCACACGAATTTCAAGTAACAGCAAGGGCGAGTTATATTACTaGTACTCTCACGAGGCAACA +
Preference number: 5 (lower is better)
Translates to: ARLLLCYQHSTRISSNSKGELYY*YSHEAT
Trigger: TGTTGCCTCGTGAGAGTACAAGTAATATAACTCGCC...CTTGCTGTTACTTGAAATTCGTGTGCTATGTTGGTAGCACAGGAGTAGGCGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GTGAAAGCAGGGTCTACCACAGGGACGTGCAGACTTGACCTTTGTGACCCAATCTCTGCTTCCTTGCTTTaGCTCATGTGTTTTTCATCT +
Preference number: 5 (lower is better)
Translates to: VKAGSTTGTCRLDLCDPISASLL*LMCFSS
Trigger: AGATGAAAAACACATGAGCAAAAGCAAGGAAGCAGA...GATTGGGTCACAAAGGTCAAGTCTGCACGTCCCTGTGGTAGACCCTGCTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTGACATGCAGGAGTTTCCTTaGGCCACACCTTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LIWFFKAGAWQPNALGGDMQEFP*ATPFSS
Trigger: TGAGGAGAAAGGTGTGGCCAAAGGAAACTCCTGCAT...GTCACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTCCACCGTTGCAGCTCTaGGTGCGAAAGAGGCGACTG +
Preference number: 5 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAPPLQL*VRKRRL
Trigger: CAGTCGCCTCTTTCGCACCAAGAGCTGCAACGGTGG...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTAGGCACTTTGAGTTCTaGTCAACTTGGGTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGRHFEF*STWVSS
Trigger: GGAGGAAACCCAAGTTGACAAGAACTCAAAGTGCCT...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GTGGGTGGTGAGGTTGGGTCACACCTCCTCAGTTGGTTTGTTTTGTACCTGAATAAACTCTACAACAGATaGACAGCGGTCCTCAAACTT +
Preference number: 5 (lower is better)
Translates to: VGGEVGSHLLSWFVLYLNKLYNR*TAVLKL
Trigger: AAGTTTGAGGACCGCTGTCAATCTGTTGTAGAGTTT...ATTCAGGTACAAAACAAACCAACTGAGGAGGTGTGACCCAACCTCACCACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGCAACCAAATGCCCTaGGTGGTGACCAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAGNQMP*VVTSRE
Trigger: CTCCCTGCTGGTCACCACCAAGGGCATTTGGTTGCC...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GAGCTTCCTCTAGGAAGAGCACAACTGTGGGAGCTGTATTTCTCACCTTCCTCCTCTGCTTCCTTGCTTTaGCTCATGTGTTTTTCATCT +
Preference number: 5 (lower is better)
Translates to: ELPLGRAQLWELYFSPSSSASLL*LMCFSS
Trigger: AGATGAAAAACACATGAGCAAAAGCAAGGAAGCAGA...GGAGGAAGGTGAGAAATACAGCTCCCACAGTTGTGCTCTTCCTAGAGGAAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGACGACTGAGGCGGATTTaGAAGGAGCCCTTCCGAGAA +
Preference number: 5 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGRLRRI*KEPFRE
Trigger: TTCTCGGAAGGGCTCCTTCAAAATCCGCCTCAGTCG...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGAGGCACTTTGAGTTCTaGTCAACTTGGGTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GSHKPDISICLVTRGNYKRHFEF*STWVSS
Trigger: GGAGGAAACCCAAGTTGACAAGAACTCAAAGTGCCT...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGCGAGTTATATTACTaGTACTCTCACGAGGCAACA +
Preference number: 5 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGGELYY*YSHEAT
Trigger: TGTTGCCTCGTGAGAGTACAAGTAATATAACTCGCC...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGAAGACTGTCTCCTCTaGCGCTGCTGTTTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNEDCLL*RCCFAA
Trigger: GGCTGCAAAACAGCAGCGCAAGAGGAGACAGTCTTC...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp AGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTGGTACTGCTCCCAAGACTTaGCTCTCCATTTTATCAAGG +
Preference number: 5 (lower is better)
Translates to: SLIWFFKAGAWQPNALGGTAPKT*LSILSR
Trigger: CCTTGATAAAATGGAGAGCAAAGTCTTGGGAGCAGT...ACCACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATGCCCTTGGTAGAAACTTTCCATTCTaGGAGTGCATAATGGCTCTC +
Preference number: 5 (lower is better)
Translates to: GSLIWFFKAGAWQPNALGRNFPF*ECIMAL
Trigger: GAGAGCCATTATGCACTCCAAGAATGGAAAGTTTCT...ACCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTAGGTGCTGGAGGGATTaGACATTGCTGAATCGGGAC +
Preference number: 5 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGARCWRD*TLLNRD
Trigger: GTCCCGATTCAGCAATGTCAAATCCCTCCAGCACCT...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATCTTCAAAGCTGGAGCTaGGCAACCAAATGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNLQSWS*ATKCPW
Trigger: CCAAGGGCATTTGGTTGCCAAGCTCCAGCTTTGAAG...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGTCCTTGATTTTCTGCTaGATGTGCAGCAGTCACCTA +
Preference number: 5 (lower is better)
Translates to: GSHKPDISICLVTRGNYKSLIFC*MCSSHL
Trigger: TAGGTGACTGCTGCACATCAAGCAGAAAATCAAGGA...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGATTGGCCAAGCTGGTCTaGAACTCCCGACCTCATGAT +
Preference number: 5 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGLAKLV*NSRPHD
Trigger: ATCATGAGGTCGGGAGTTCAAGACCAGCTTGGCCAA...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGACTGCTCCCAAGACTTaGCTCTCCATTTTATCAAGG +
Preference number: 5 (lower is better)
Translates to: GSHKPDISICLVTRGNYKTAPKT*LSILSR
Trigger: CCTTGATAAAATGGAGAGCAAAGTCTTGGGAGCAGT...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGACATCTTCCCAATTCATaGGCCCCCAATACCAACCAC +
Preference number: 5 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGHLPNS*APNTNH
Trigger: GTGGTTGGTATTGGGGGCCAATGAATTGGGAAGATG...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp GGAAGCCACAAACCTGACATTAGTATCTGTCTTGTGACACGAGGCAACTATAAGAAACTCTACAACAGATaGACAGCGGTCCTCAAACTT +
Preference number: 5 (lower is better)
Translates to: GSHKPDISICLVTRGNYKKLYNR*TAVLKL
Trigger: AAGTTTGAGGACCGCTGTCAATCTGTTGTAGAGTTT...CTTATAGTTGCCTCGTGTCACAAGACAGATACTAATGTCAGGTTTGTGGCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATTGGAGGGATTTGACATaGCTGAATCGGGACACTGGA +
Preference number: 5 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNWRDLT*LNRDTG
Trigger: TCCAGTGTCCCGATTCAGCAATGTCAAATCCCTCCA...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTTTGGCCAAGCTGGTCTaGAACTCCCGACCTCATGAT +
Preference number: 5 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKALAKLV*NSRPHD
Trigger: ATCATGAGGTCGGGAGTTCAAGACCAGCTTGGCCAA...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAATGCAGGAGTTTCCTTaGGCCACACCTTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGMQEFP*ATPFSS
Trigger: TGAGGAGAAAGGTGTGGCCAAAGGAAACTCCTGCAT...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATAGGCACTTTGAGTTCTaGTCAACTTGGGTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNRHFEF*STWVSS
Trigger: GGAGGAAACCCAAGTTGACAAGAACTCAAAGTGCCT...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAAGGCACTTTGAGTTCTaGTCAACTTGGGTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGRHFEF*STWVSS
Trigger: GGAGGAAACCCAAGTTGACAAGAACTCAAAGTGCCT...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTTGGAGGGATTTGACATaGCTGAATCGGGACACTGGA +
Preference number: 5 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAWRDLT*LNRDTG
Trigger: TCCAGTGTCCCGATTCAGCAATGTCAAATCCCTCCA...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTAAAATACAGAAGCCCTaGCTACCTCCCATCCCAGAA +
Preference number: 5 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAKIQKP*LPPIPE
Trigger: TTCTGGGATGGGAGGTAGCAAGGGCTTCTGTATTTT...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTACTTCAGGCTCTATATaGGGGTGGCACTTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKATSGSI*GWHFLQ
Trigger: TTGCAGGAAGTGCCACCCCAATATAGAGCCTGAAGT...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTATGCAGGAGTTTCCTTaGGCCACACCTTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAMQEFP*ATPFSS
Trigger: TGAGGAGAAAGGTGTGGCCAAAGGAAACTCCTGCAT...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTAAAATACAGAAGCCCTaGCTACCTCCCATCCCAGAA +
Preference number: 5 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKAKIQKP*LPPIPE
Trigger: TTCTGGGATGGGAGGTAGCAAGGGCTTCTGTATTTT...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTGTCACACCTCCTCAGTaGGTTTGTTTTGTACCTGAA +
Preference number: 5 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAVTPPQ*VCFVPE
Trigger: TTCAGGTACAAAACAAACCAACTGAGGAGGTGTGAC...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTAGAAACTTTCCATTCTaGGAGTGCATAATGGCTCTC +
Preference number: 5 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGARNFPF*ECIMAL
Trigger: GAGAGCCATTATGCACTCCAAGAATGGAAAGTTTCT...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp CCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAAGAAACTTTCCATTCTaGGAGTGCATAATGGCTCTC +
Preference number: 5 (lower is better)
Translates to: PHFSSSFHGSLIWFFKAGRNFPF*ECIMAL
Trigger: GAGAGCCATTATGCACTCCAAGAATGGAAAGTTTCT...TCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp TCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTTGGCAACCAAATAGAAACTTTCCATTCTaGGAGTGCATAATGGCTCTC +
Preference number: 5 (lower is better)
Translates to: SFHGSLIWFFKAGAWQPNRNFPF*ECIMAL
Trigger: GAGAGCCATTATGCACTCCAAGAATGGAAAGTTTCT...ATTTGGTTGCCAAGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS-3UTR CAA 90 bp TTCCCTCACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTCTTTATCCCAGTGTCTaGTCCACTAACTTTAGGGCT +
Preference number: 5 (lower is better)
Translates to: FPHFSSSFHGSLIWFFKALYPSV*STNFRA
Trigger: AGCCCTAAAGTTAGTGGACAAGACACTGGGATAAAG...AGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTGAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS-3UTR CAA 90 bp CACTTTTCCTCTTCTTTTCATGGTAGCTTAATTTGGTTCTTCAAAGCTGGAGCTCCACCCCATTTAAGATaGGCCTGCAAGTCTATTTTA +
Preference number: 5 (lower is better)
Translates to: HFSSSFHGSLIWFFKAGAPPHLR*ACKSIL
Trigger: TAAAATAGACTTGCAGGCCAATCTTAAATGGGGTGG...AGCTCCAGCTTTGAAGAACCAAATTAAGCTACCATGAAAAGAAGAGGAAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS CCA 72 bp AGCCCTCCAGGACCAGCAGCGCGTCGCTCGTTTCCGTaGGGTCCTCCCCGGCCTGCGGGGCGGCAGCAGGCG +
Preference number: 6 (lower is better)
Translates to: SPPGPAARRSFP*GPPRPAGRQQA
Trigger: CGCCTGCTGCCGCCCCGCAGGCCGGGGAGGACCCCACGGAAACGAGCGACGCGCTGCTGGTCCTGGAGGGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS CAA 72 bp GCCTCCACGTCCTCCTCCTCCGGCGGCCGACCCACGTaGCGGAACACCATCAGCTGCGGCGGCCGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: ASTSSSSGGRPT*RNTISCGGREP
Trigger: GGGCTCCCGGCCGCCGCAGCTGATGGTGTTCCGCAACGTGGGTCGGCCGCCGGAGGAGGAGGACGTGGAGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612932.6
ENST00000665913.1
CDS GCA 72 bp TCGCAGCTGAAGCAGCCAGCTCTCCAGAAGGCCTCTTaGCGGTCCCATCCCCACCGCCGGAGCCACCGTTGC +
Preference number: 6 (lower is better)
Translates to: SQLKQPALQKAS*RSHPHRRSHRC
Trigger: GCAACGGTGGCTCCGGCGGTGGGGATGGGACCGGCAAGAGGCCTTCTGGAGAGCTGGCTGCTTCAGCTGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000631449.1
ENST00000631692.1
ENST00000665913.1
CDS CAA 72 bp CTCGCAGCTGAAGCAGCCAGCTCTCCAGAAGGCCTCTaGCCGGTCCCATCCCCACCGCCGGAGCCACCGTTG +
Preference number: 6 (lower is better)
Translates to: LAAEAASSPEGL*PVPSPPPEPPL
Trigger: CAACGGTGGCTCCGGCGGTGGGGATGGGACCGGCAAGAGGCCTTCTGGAGAGCTGGCTGCTTCAGCTGCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000631449.1
ENST00000631692.1
ENST00000665913.1
CDS CAA 90 bp GCTCGAGTCAGGCCGGTAGAGGGGACACTGGAGGTGCTGTGGGGGTaGGCTGTGCAGGGATTCAGCTGCTCGGATGGGAGCAATCCGGGG +
Preference number: 6 (lower is better)
Translates to: ARVRPVEGTLEVLWG*AVQGFSCSDGSNPG
Trigger: CCCCGGATTGCTCCCATCCGAGCAGCTGAATCCCTGCACAGCCAACCCCCACAGCACCTCCAGTGTCCCCTCTACCGGCCTGACTCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000617765.1
ENST00000631449.1
ENST00000631692.1
ENST00000632687.1
ENST00000665913.1
CDS TCA 72 bp GCCCGCAGAGCCTCCCATGTCTGTCAGGCTCGCAGCTaGAGCAGCCAGCTCTCCAGAAGGCCTCTTGCCGGT +
Preference number: 6 (lower is better)
Translates to: ARRASHVCQARS*SSQLSRRPLAG
Trigger: ACCGGCAAGAGGCCTTCTGGAGAGCTGGCTGCTTCAGCTGCGAGCCTGACAGACATGGGAGGCTCTGCGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000631449.1
ENST00000631692.1
ENST00000665913.1
CDS GCA 72 bp TCCCCTCTACTCAGGCGCCCCAGAGGGACCAAGTCCTaGAGCGGGAAGGGCACCGGAGGTAATTCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: SPLLRRPRGTKS*SGKGTGGNSGP
Trigger: AGGCCCTGAATTACCTCCGGTGCCCTTCCCGCTGCAGGACTTGGTCCCTCTGGGGCGCCTGAGTAGAGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000631449.1
ENST00000631692.1
ENST00000665913.1
CDS CAA 90 bp CCACCGTTGCAGCTCTTGGTGCGAAAGAGGCGACTGAGGCGGATTTaGAAGGAGCCCTTCCGAGAAGGACCCGCGAGTGGCCGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: PPLQLLVRKRRLRRI*KEPFREGPASGRRG
Trigger: GCCCCTCCGGCCACTCGCGGGTCCTTCTCGGAAGGGCTCCTTCAAAATCCGCCTCAGTCGCCTCTTTCGCACCAAGAGCTGCAACGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000631449.1
ENST00000631692.1
ENST00000665913.1
CDS CAA 90 bp CTCTTGCCGGTCCCATCCCCACCGCCGGAGCCACCGTTGCAGCTCTaGGTGCGAAAGAGGCGACTGAGGCGGATTTTGAAGGAGCCCTTC +
Preference number: 6 (lower is better)
Translates to: LLPVPSPPPEPPLQL*VRKRRLRRILKEPF
Trigger: GAAGGGCTCCTTCAAAATCCGCCTCAGTCGCCTCTTTCGCACCAAGAGCTGCAACGGTGGCTCCGGCGGTGGGGATGGGACCGGCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000631449.1
ENST00000631692.1
ENST00000665913.1
CDS CAA 90 bp CCAGAAGGCCTCTTGCCGGTCCCATCCCCACCGCCGGAGCCACCGTaGCAGCTCTTGGTGCGAAAGAGGCGACTGAGGCGGATTTTGAAG +
Preference number: 6 (lower is better)
Translates to: PEGLLPVPSPPPEPP*QLLVRKRRLRRILK
Trigger: CTTCAAAATCCGCCTCAGTCGCCTCTTTCGCACCAAGAGCTGCAACGGTGGCTCCGGCGGTGGGGATGGGACCGGCAAGAGGCCTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000631449.1
ENST00000631692.1
ENST00000665913.1
CDS GCA 72 bp GAGGTGCTGTGGGGGTTGGCTGTGCAGGGATTCAGCTaGTCGGATGGGAGCAATCCGGGGAAATGCATCTGG +
Preference number: 6 (lower is better)
Translates to: EVLWGLAVQGFS*SDGSNPGKCIW
Trigger: CCAGATGCATTTCCCCGGATTGCTCCCATCCGAGCAGCTGAATCCCTGCACAGCCAACCCCCACAGCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612932.6
ENST00000615473.2
ENST00000665913.1
CDS CAA 72 bp CAGCTCTTGGTGCGAAAGAGGCGACTGAGGCGGATTTaGAAGGAGCCCTTCCGAGAAGGACCCGCGAGTGGC +
Preference number: 6 (lower is better)
Translates to: QLLVRKRRLRRI*KEPFREGPASG
Trigger: GCCACTCGCGGGTCCTTCTCGGAAGGGCTCCTTCAAAATCCGCCTCAGTCGCCTCTTTCGCACCAAGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000631449.1
ENST00000631692.1
ENST00000665913.1
CDS GCA 72 bp GAGGTGCTGTGGGGGTTGGCTGTGCAGGGATTCAGCTaGTCGGATGGGAGCAATCCGGGGAAATGCATCTGT +
Preference number: 6 (lower is better)
Translates to: EVLWGLAVQGFS*SDGSNPGKCIC
Trigger: ACAGATGCATTTCCCCGGATTGCTCCCATCCGAGCAGCTGAATCCCTGCACAGCCAACCCCCACAGCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617765.1
ENST00000632687.1
CDS TCA 72 bp GGGGGAGTTGGAGGGTGTGGAGAGGTCAGGCCCCGCTaGGAAATGTCCACATCCACAAGCGACACAGTTTCA +
Preference number: 6 (lower is better)
Translates to: GGVGGCGEVRPR*EMSTSTSDTVS
Trigger: TGAAACTGTGTCGCTTGTGGATGTGGACATTTCTCAGCGGGGCCTGACCTCTCCACACCCTCCAACTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000631449.1
ENST00000631692.1
ENST00000665913.1
CDS GCA 72 bp GAGGTGCTGTGGGGGTTGGCTGTGCAGGGATTCAGCTaGTCGGATGGGAGCAATCCGGGGAAATGCATCTTA +
Preference number: 6 (lower is better)
Translates to: EVLWGLAVQGFS*SDGSNPGKCIL
Trigger: TAAGATGCATTTCCCCGGATTGCTCCCATCCGAGCAGCTGAATCCCTGCACAGCCAACCCCCACAGCACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617360.1
ENST00000631449.1
CDS CCA 72 bp CCCAATACCAACCACACTTCTCCAACTCTCGAAGGCTaGCTGCAAAGCTGCTCGAGTCAGGCCGGTAGAGGG +
Preference number: 6 (lower is better)
Translates to: PNTNHTSPTLEG*LQSCSSQAGRG
Trigger: CCCTCTACCGGCCTGACTCGAGCAGCTTTGCAGCCAGCCTTCGAGAGTTGGAGAAGTGTGGTTGGTATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000617765.1
ENST00000631449.1
ENST00000631692.1
ENST00000632687.1
ENST00000665913.1
CDS CCA 72 bp GTGGGGGTTGGCTGTGCAGGGATTCAGCTGCTCGGATaGGAGCAATCCGGGGAAATGCATCTTACTAAGGTG +
Preference number: 6 (lower is better)
Translates to: VGVGCAGIQLLG*EQSGEMHLTKV
Trigger: CACCTTAGTAAGATGCATTTCCCCGGATTGCTCCCATCCGAGCAGCTGAATCCCTGCACAGCCAACCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617360.1
ENST00000631449.1
CDS GCA 72 bp CAGGGAGCCCCTCGCTACGTGGAGGGTTCCACCTCTTaGTTCTGTTTGGAAATGAGCTGCGCTTCCTTTAGA +
Preference number: 6 (lower is better)
Translates to: QGAPRYVEGSTS*FCLEMSCASFR
Trigger: TCTAAAGGAAGCGCAGCTCATTTCCAAACAGAAGCAAGAGGTGGAACCCTCCACGTAGCGAGGGGCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS CCA 72 bp GTGCTGGAGGGATTTGACATTGCTGAATCGGGACACTaGATAGAGCAGCTGGACAGGAGTTGGTGGCAGTCC +
Preference number: 6 (lower is better)
Translates to: VLEGFDIAESGH*IEQLDRSWWQS
Trigger: GGACTGCCACCAACTCCTGTCCAGCTGCTCTATCCAGTGTCCCGATTCAGCAATGTCAAATCCCTCCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS CAA 90 bp CAGGGAGCCCCTCGCTACGTGGAGGGTTCCACCTCTTGCTTCTGTTaGGAAATGAGCTGCGCTTCCTTTAGAGACAGGTATACCTCTTCC +
Preference number: 6 (lower is better)
Translates to: QGAPRYVEGSTSCFC*EMSCASFRDRYTSS
Trigger: GGAAGAGGTATACCTGTCTCTAAAGGAAGCGCAGCTCATTTCCAAACAGAAGCAAGAGGTGGAACCCTCCACGTAGCGAGGGGCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000631692.1
ENST00000665913.1
CDS TCA 72 bp GTAGTGCTCCATTCTAGTGTGGTGGGTGATACCCTGTaGTCGGAAACTGAGGCTCAGGATGTAACGAGGATC +
Preference number: 6 (lower is better)
Translates to: VVLHSSVVGDTL*SETEAQDVTRI
Trigger: GATCCTCGTTACATCCTGAGCCTCAGTTTCCGATCACAGGGTATCACCCACCACACTAGAATGGAGCACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000612932.6
ENST00000613678.5
ENST00000615473.2
ENST00000617360.1
ENST00000617765.1
ENST00000631449.1
ENST00000631692.1
ENST00000632687.1
ENST00000665913.1
CDS TCA 72 bp CAGCCTAGAGCGATTCCAACTTCTCCCACCTCGAAGTaGAGTGCCGATAAGGCAGCCTTGGAAATAGTGACT +
Preference number: 6 (lower is better)
Translates to: QPRAIPTSPTSK*SADKAALEIVT
Trigger: AGTCACTATTTCCAAGGCTGCCTTATCGGCACTTCACTTCGAGGTGGGAGAAGTTGGAATCGCTCTAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617360.1
ENST00000631449.1
CDS CCA 72 bp TTATTCCTTGGGTACTGTAAGCTGGCAAAGCAGGTATaGGCTGCTAAATGCTTGGTACTTATTTACAAGGCT +
Preference number: 6 (lower is better)
Translates to: LFLGYCKLAKQV*AAKCLVLIYKA
Trigger: AGCCTTGTAAATAAGTACCAAGCATTTAGCAGCCCATACCTGCTTTGCCAGCTTACAGTACCCAAGGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617360.1
ENST00000631449.1