Pregenerated sensors for SOCS6 (Homo sapiens)
Ensembl gene IDs: ENSG00000170677Ensembl transcript IDs: ENST00000397942.4
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TGGAACTGTTTTCTTCAACAGCAAGATGGTTGGTTGCCCCGTGTAGCTGGTTTCGTCCAAAGACCTCTGTaGACCATGATCTCACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: WNCFLQQQDGWLPRVAGFVQRPL*TMISQG Trigger: TCCTTGTGAGATCATGGTGCACAGAGGTCTTTGGAC...GAAACCAGCTACACGGGGCAACCAACCATCTTGCTGTTGAAGAAAACAGTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| 3UTR-3UTR GCA 90 bp | TGGAACTGTTTTCTTCAACAGCAAGATGGTTGGTTGCCCCGTGTAGCTGGTTTCAGGAGGACATGTAAATaGTTCTGGAGACACGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: WNCFLQQQDGWLPRVAGFRRTCK*FWRHGE Trigger: TTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCT...GAAACCAGCTACACGGGGCAACCAACCATCTTGCTGTTGAAGAAAACAGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| 3UTR-3UTR GCA 90 bp | TGGAACTGTTTTCTTCAACAGCAAGATGGTTGGTTGCCCCGTGTAGCTGGTTTCTTTCACATTCTGTTGTaGTGCCTACCCCAAATGGTT | + |
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Preference number: 2 (lower is better) Translates to: WNCFLQQQDGWLPRVAGFFHILL*CLPQMV Trigger: AACCATTTGGGGTAGGCAGCACAACAGAATGTGAAA...GAAACCAGCTACACGGGGCAACCAACCATCTTGCTGTTGAAGAAAACAGTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| 3UTR-3UTR CCA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTAGTGGGGGTAAGGATTaGTCAAATCCAGCACACTTT | + |
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Preference number: 2 (lower is better) Translates to: HDLTRRTCKCFWRHGEAISGGKD*SNPAHF Trigger: AAAGTGTGCTGGATTTGACCAATCCTTACCCCCACT...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| 3UTR-3UTR TCA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTATCTCTTCCTTTAAGTaGCAAAGGAAGAACCATCCC | + |
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Preference number: 2 (lower is better) Translates to: HDLTRRTCKCFWRHGEAIISSFK*QRKNHP Trigger: GGGATGGTTCTTCCTTTGTCACTTAAAGGAAGAGAT...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| 3UTR-3UTR CCA 90 bp | TGGAACTGTTTTCTTCAACAGCAAGATGGTTGGTTGCCCCGTGTAGCTGGTTTCGCTGCCTACCCCAAATaGTTATCTTTCTACACAAAA | + |
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Preference number: 2 (lower is better) Translates to: WNCFLQQQDGWLPRVAGFAAYPK*LSFYTK Trigger: TTTTGTGTAGAAAGATAACCATTTGGGGTAGGCAGC...GAAACCAGCTACACGGGGCAACCAACCATCTTGCTGTTGAAGAAAACAGTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| 3UTR-3UTR TCA 90 bp | GTAATACTGGCTCAAGAATTACAACGCATACTTTGGGTTTTGTTTCCTTTATGCGACCTCTGTGCACCATaGTCTCACAAGGAGGACATG | + |
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Preference number: 2 (lower is better) Translates to: VILAQELQRILWVLFPLCDLCAP*SHKEDM Trigger: CATGTCCTCCTTGTGAGATCATGGTGCACAGAGGTC...GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAATTCTTGAGCCAGTATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| 3UTR-3UTR CCA 90 bp | TGGAACTGTTTTCTTCAACAGCAAGATGGTTGGTTGCCCCGTGTAGCTGGTTTCAAGCGCATCAAAATTTaGCTTTCTGAATTAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: WNCFLQQQDGWLPRVAGFKRIKI*LSELEQ Trigger: CTGTTCTAATTCAGAAAGCCAAATTTTGATGCGCTT...GAAACCAGCTACACGGGGCAACCAACCATCTTGCTGTTGAAGAAAACAGTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| 3UTR-3UTR CCA 90 bp | GTAATACTGGCTCAAGAATTACAACGCATACTTTGGGTTTTGTTTCCTTTATGCTCTTCAACAGCAAGATaGTTGGTTGCCCCGTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: VILAQELQRILWVLFPLCSSTAR*LVAPCS Trigger: GCTACACGGGGCAACCAACCATCTTGCTGTTGAAGA...GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAATTCTTGAGCCAGTATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| 3UTR-3UTR GCA 90 bp | GTAATACTGGCTCAAGAATTACAACGCATACTTTGGGTTTTGTTTCCTTTATGCCACATTCTGTTGTGCTaGCTACCCCAAATGGTTATC | + |
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Preference number: 2 (lower is better) Translates to: VILAQELQRILWVLFPLCHILLC*LPQMVI Trigger: GATAACCATTTGGGGTAGGCAGCACAACAGAATGTG...GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAATTCTTGAGCCAGTATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| 3UTR-3UTR TCA 90 bp | GTAATACTGGCTCAAGAATTACAACGCATACTTTGGGTTTTGTTTCCTTTATGCTTAAAGGTGTGTAGCTaGAAATTTTCTGGACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: VILAQELQRILWVLFPLCLKVCS*KFSGQG Trigger: GCCCTGTCCAGAAAATTTTCAGCTACACACCTTTAA...GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAATTCTTGAGCCAGTATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| 3UTR-3UTR CCA 90 bp | GTAATACTGGCTCAAGAATTACAACGCATACTTTGGGTTTTGTTTCCTTTATGCCTGATTCATCTATTATaGCAAATGGATACAGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: VILAQELQRILWVLFPLCLIHLL*QMDTAF Trigger: GAAAGCTGTATCCATTTGCCATAATAGATGAATCAG...GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAATTCTTGAGCCAGTATTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| 3UTR-3UTR CAA 90 bp | GTAATACTGGCTCAAGAATTACAACGCATACTTTGGGTTTTGTTTCCTTTATGCCAGCAAGATGGTTGGTaGCCCCGTGTAGCTGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: VILAQELQRILWVLFPLCQQDGW*PRVAGF Trigger: GAAACCAGCTACACGGGGCAACCAACCATCTTGCTG...GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAATTCTTGAGCCAGTATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR TCA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTGGAGGGACATCATCGTaGCCCGCTCTCGGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HDLTRRTCKCFWRHGEAIGGTSS*PALGLC Trigger: GCAGAGCCCGAGAGCGGGTCACGATGATGTCCCTCC...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CCA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTGGGCTGGACTCGGGCTaGAAGAGTGAACCAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: HDLTRRTCKCFWRHGEAIGLDSG*KSEPRP Trigger: AGGCCTTGGTTCACTCTTCCAGCCCGAGTCCAGCCC...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR TCA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTAGGTCCTGGTCTACCTaGCTCTCATCCTCGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: HDLTRRTCKCFWRHGEAIRSWST*LSSSGK Trigger: TTTCCCCGAGGATGAGAGTCAGGTAGACCAGGACCT...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR GCA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTGACTGTAGTGATGGCTaGGGAGCGACGTGGACCTTA | + |
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Preference number: 4 (lower is better) Translates to: HDLTRRTCKCFWRHGEAIDCSDG*GATWTL Trigger: TAAGGTCCACGTCGCTCCGCAGCCATCACTACAGTC...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CCA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTTCAGACTGGAGGTCGTaGAAATCCTTCCGGACGCCA | + |
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Preference number: 4 (lower is better) Translates to: HDLTRRTCKCFWRHGEAISDWRS*KSFRTP Trigger: TGGCGTCCGGAAGGATTTCCACGACCTCCAGTCTGA...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR TCA 90 bp | TCATCACGGGTTCTCTTTATAGTGGGGGTAAGGATTGGTCAAATCCAGCACACTGACCTCTGTGCACCATaGTCTCACAAGGAGGACATG | + |
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Preference number: 4 (lower is better) Translates to: SSRVLFIVGVRIGQIQHTDLCAP*SHKEDM Trigger: CATGTCCTCCTTGTGAGATCATGGTGCACAGAGGTC...AGTGTGCTGGATTTGACCAATCCTTACCCCCACTATAAAGAGAACCCGTGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR GCA 90 bp | TGGAACTGTTTTCTTCAACAGCAAGATGGTTGGTTGCCCCGTGTAGCTGGTTTCAGGGTGTGCCCGCCTTaGCTTTTGACTTCTGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: WNCFLQQQDGWLPRVAGFRVCPP*LLTSVL Trigger: CAAAACAGAAGTCAAAAGGCAAGGCGGGCACACCCT...GAAACCAGCTACACGGGGCAACCAACCATCTTGCTGTTGAAGAAAACAGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CCA 90 bp | GTAATACTGGCTCAAGAATTACAACGCATACTTTGGGTTTTGTTTCCTTTATGCTCTCCTCGGAGTTTGTaGGCCGCAGAGGCCACGGCG | + |
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Preference number: 4 (lower is better) Translates to: VILAQELQRILWVLFPLCSPRSL*AAEATA Trigger: CGCCGTGGCCTCTGCGGCCCACAAACTCCGAGGAGA...GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAATTCTTGAGCCAGTATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR TCA 90 bp | GTAATACTGGCTCAAGAATTACAACGCATACTTTGGGTTTTGTTTCCTTTATGCACGAGCGCACCTGCATaGACCGGGACACTGGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: VILAQELQRILWVLFPLCTSAPA*TGTLGW Trigger: CCAACCCAGTGTCCCGGTTCATGCAGGTGCGCTCGT...GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAATTCTTGAGCCAGTATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR GCA 90 bp | AAATTTTCTGGACAGGGCAATCCCAAAATACTACATCCATTGCAGAACTGTGAATGCAACGAGCGCACCTaGATGAACCGGGACACTGGG | + |
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Preference number: 4 (lower is better) Translates to: KFSGQGNPKILHPLQNCECNERT*MNRDTG Trigger: CCCAGTGTCCCGGTTCATGCAGGTGCGCTCGTTGCA...TTCACAGTTCTGCAATGGATGTAGTATTTTGGGATTGCCCTGTCCAGAAAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CCA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTTTATCCCCAAACATCTaGAGAGGCTGCAAGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: HDLTRRTCKCFWRHGEAILSPNI*RGCKAA Trigger: TGCAGCCTTGCAGCCTCTCCAGATGTTTGGGGATAA...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CCA 90 bp | AAATTTTCTGGACAGGGCAATCCCAAAATACTACATCCATTGCAGAACTGTGAACATGAACCGGGACACTaGGTTGGTCAGTCTGACGGG | + |
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Preference number: 4 (lower is better) Translates to: KFSGQGNPKILHPLQNCEHEPGH*VGQSDG Trigger: CCCGTCAGACTGACCAACCCAGTGTCCCGGTTCATG...TTCACAGTTCTGCAATGGATGTAGTATTTTGGGATTGCCCTGTCCAGAAAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR GCA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTGAGAGGCTGCAAGGCTaGATCTATGTATTTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HDLTRRTCKCFWRHGEAIERLQG*IYVFFL Trigger: CAGGAAAAATACATAGATGCAGCCTTGCAGCCTCTC...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR GCA 90 bp | TCATCACGGGTTCTCTTTATAGTGGGGGTAAGGATTGGTCAAATCCAGCACACTAACATCTGGAGAGGCTaGAAGGCTGCATCTATGTAT | + |
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Preference number: 4 (lower is better) Translates to: SSRVLFIVGVRIGQIQHTNIWRG*KAASMY Trigger: ATACATAGATGCAGCCTTGCAGCCTCTCCAGATGTT...AGTGTGCTGGATTTGACCAATCCTTACCCCCACTATAAAGAGAACCCGTGATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR GCA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTAGGAGGACATGTAAATaGTTCTGGAGACACGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: HDLTRRTCKCFWRHGEAIRRTCK*FWRHGE Trigger: TTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCT...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR GCA 90 bp | TCATCACGGGTTCTCTTTATAGTGGGGGTAAGGATTGGTCAAATCCAGCACACTCACATTCTGTTGTGCTaGCTACCCCAAATGGTTATC | + |
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Preference number: 4 (lower is better) Translates to: SSRVLFIVGVRIGQIQHTHILLC*LPQMVI Trigger: GATAACCATTTGGGGTAGGCAGCACAACAGAATGTG...AGTGTGCTGGATTTGACCAATCCTTACCCCCACTATAAAGAGAACCCGTGATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CCA 90 bp | TGGAACTGTTTTCTTCAACAGCAAGATGGTTGGTTGCCCCGTGTAGCTGGTTTCACATGTAAATGCTTCTaGAGACACGGAGAAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: WNCFLQQQDGWLPRVAGFTCKCF*RHGEAI Trigger: AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGT...GAAACCAGCTACACGGGGCAACCAACCATCTTGCTGTTGAAGAAAACAGTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR TCA 90 bp | GTAATACTGGCTCAAGAATTACAACGCATACTTTGGGTTTTGTTTCCTTTATGCAGCCGAGCTCTTCAGTaGATTGGCTTGCTCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: VILAQELQRILWVLFPLCSRALQ*IGLLLA Trigger: TGCCAGGAGCAAGCCAATTCACTGAAGAGCTCGGCT...GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAATTCTTGAGCCAGTATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR GCA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTTTTCACATTCTGTTGTaGTGCCTACCCCAAATGGTT | + |
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Preference number: 4 (lower is better) Translates to: HDLTRRTCKCFWRHGEAIFHILL*CLPQMV Trigger: AACCATTTGGGGTAGGCAGCACAACAGAATGTGAAA...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CCA 90 bp | AAATTTTCTGGACAGGGCAATCCCAAAATACTACATCCATTGCAGAACTGTGAACAACAGCAAGATGGTTaGTTGCCCCGTGTAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: KFSGQGNPKILHPLQNCEQQQDG*LPRVAG Trigger: ACCAGCTACACGGGGCAACCAACCATCTTGCTGTTG...TTCACAGTTCTGCAATGGATGTAGTATTTTGGGATTGCCCTGTCCAGAAAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR TCA 90 bp | TGGAACTGTTTTCTTCAACAGCAAGATGGTTGGTTGCCCCGTGTAGCTGGTTTCATTATTAATACACAGTaGCTCTGTGACAAAACCTGC | + |
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Preference number: 4 (lower is better) Translates to: WNCFLQQQDGWLPRVAGFIINTQ*LCDKTC Trigger: GCAGGTTTTGTCACAGAGTCACTGTGTATTAATAAT...GAAACCAGCTACACGGGGCAACCAACCATCTTGCTGTTGAAGAAAACAGTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR TCA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTTTTCCTTTATGCCAATaGTTTAGCCTTTTGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: HDLTRRTCKCFWRHGEAIFPLCQ*FSLLEL Trigger: CAGTTCCAAAAGGCTAAATCATTGGCATAAAGGAAA...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CCA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTAACACCATAATATTATaGCATTGTGCCTTTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: HDLTRRTCKCFWRHGEAINTIIL*HCAFSW Trigger: CCAAGAAAAGGCACAATGCCATAATATTATGGTGTT...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CCA 90 bp | TCATCACGGGTTCTCTTTATAGTGGGGGTAAGGATTGGTCAAATCCAGCACACTCTGATTCATCTATTATaGCAAATGGATACAGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: SSRVLFIVGVRIGQIQHTLIHLL*QMDTAF Trigger: GAAAGCTGTATCCATTTGCCATAATAGATGAATCAG...AGTGTGCTGGATTTGACCAATCCTTACCCCCACTATAAAGAGAACCCGTGATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CCA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTTTACAACGCATACTTTaGGTTTTGTTTCCTTTATGC | + |
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Preference number: 4 (lower is better) Translates to: HDLTRRTCKCFWRHGEAILQRIL*VLFPLC Trigger: GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAA...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR TCA 90 bp | GTAATACTGGCTCAAGAATTACAACGCATACTTTGGGTTTTGTTTCCTTTATGCTTTCATCTTCACCGTTaGTATCGCAGCTGGCCATAT | + |
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Preference number: 4 (lower is better) Translates to: VILAQELQRILWVLFPLCFHLHR*YRSWPY Trigger: ATATGGCCAGCTGCGATATCAACGGTGAAGATGAAA...GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAATTCTTGAGCCAGTATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CCA 90 bp | GTAATACTGGCTCAAGAATTACAACGCATACTTTGGGTTTTGTTTCCTTTATGCAGTGGGGGTAAGGATTaGTCAAATCCAGCACACTTT | + |
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Preference number: 4 (lower is better) Translates to: VILAQELQRILWVLFPLCSGGKD*SNPAHF Trigger: AAAGTGTGCTGGATTTGACCAATCCTTACCCCCACT...GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAATTCTTGAGCCAGTATTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR TCA 90 bp | GTAATACTGGCTCAAGAATTACAACGCATACTTTGGGTTTTGTTTCCTTTATGCGCACTCCAACGACTATaGAATTTCTTTCACCCAACA | + |
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Preference number: 4 (lower is better) Translates to: VILAQELQRILWVLFPLCALQRL*NFFHPT Trigger: TGTTGGGTGAAAGAAATTTCATAGTCGTTGGAGTGC...GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAATTCTTGAGCCAGTATTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CCA 90 bp | AAATTTTCTGGACAGGGCAATCCCAAAATACTACATCCATTGCAGAACTGTGAACCTAAAAATAGCTTCTaGCCTCCATCATATTTCGTG | + |
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Preference number: 4 (lower is better) Translates to: KFSGQGNPKILHPLQNCEPKNSF*PPSYFV Trigger: CACGAAATATGATGGAGGCCAGAAGCTATTTTTAGG...TTCACAGTTCTGCAATGGATGTAGTATTTTGGGATTGCCCTGTCCAGAAAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CCA 90 bp | GTAATACTGGCTCAAGAATTACAACGCATACTTTGGGTTTTGTTTCCTTTATGCAAGCGCATCAAAATTTaGCTTTCTGAATTAGAACAG | + |
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Preference number: 4 (lower is better) Translates to: VILAQELQRILWVLFPLCKRIKI*LSELEQ Trigger: CTGTTCTAATTCAGAAAGCCAAATTTTGATGCGCTT...GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAATTCTTGAGCCAGTATTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CAA 90 bp | TGGAACTGTTTTCTTCAACAGCAAGATGGTTGGTTGCCCCGTGTAGCTGGTTTCGAGCTCTTCAGTGAATaGGCTTGCTCCTGGCACGTG | + |
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Preference number: 5 (lower is better) Translates to: WNCFLQQQDGWLPRVAGFELFSE*ACSWHV Trigger: CACGTGCCAGGAGCAAGCCAATTCACTGAAGAGCTC...GAAACCAGCTACACGGGGCAACCAACCATCTTGCTGTTGAAGAAAACAGTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CAA 90 bp | TGGAACTGTTTTCTTCAACAGCAAGATGGTTGGTTGCCCCGTGTAGCTGGTTTCGAGGGTGTGCCCGCCTaGCCTTTTGACTTCTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: WNCFLQQQDGWLPRVAGFEGVPA*PFDFCF Trigger: AAAACAGAAGTCAAAAGGCAAGGCGGGCACACCCTC...GAAACCAGCTACACGGGGCAACCAACCATCTTGCTGTTGAAGAAAACAGTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CAA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTCAGCAAGATGGTTGGTaGCCCCGTGTAGCTGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: HDLTRRTCKCFWRHGEAIQQDGW*PRVAGF Trigger: GAAACCAGCTACACGGGGCAACCAACCATCTTGCTG...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CAA 90 bp | CATGATCTCACAAGGAGGACATGTAAATGCTTCTGGAGACACGGAGAAGCCATTTCAACAGCAAGATGGTaGGTTGCCCCGTGTAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: HDLTRRTCKCFWRHGEAISTARW*VAPCSW Trigger: CCAGCTACACGGGGCAACCAACCATCTTGCTGTTGA...AATGGCTTCTCCGTGTCTCCAGAAGCATTTACATGTCCTCCTTGTGAGATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CAA 90 bp | GTAATACTGGCTCAAGAATTACAACGCATACTTTGGGTTTTGTTTCCTTTATGCAGGTCTCCTCGGAGTTaGTGGGCCGCAGAGGCCACG | + |
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Preference number: 5 (lower is better) Translates to: VILAQELQRILWVLFPLCRSPRS*WAAEAT Trigger: CGTGGCCTCTGCGGCCCACAAACTCCGAGGAGACCT...GCATAAAGGAAACAAAACCCAAAGTATGCGTTGTAATTCTTGAGCCAGTATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CAA 90 bp | TGGAACTGTTTTCTTCAACAGCAAGATGGTTGGTTGCCCCGTGTAGCTGGTTTCTTTTCATCTTCACCGTaGATATCGCAGCTGGCCATA | + |
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Preference number: 5 (lower is better) Translates to: WNCFLQQQDGWLPRVAGFFSSSP*ISQLAI Trigger: TATGGCCAGCTGCGATATCAACGGTGAAGATGAAAA...GAAACCAGCTACACGGGGCAACCAACCATCTTGCTGTTGAAGAAAACAGTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CAA 90 bp | TCATCACGGGTTCTCTTTATAGTGGGGGTAAGGATTGGTCAAATCCAGCACACTATCTTTCACATTCTGTaGTGCTGCCTACCCCAAATG | + |
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Preference number: 5 (lower is better) Translates to: SSRVLFIVGVRIGQIQHTIFHIL*CCLPQM Trigger: CATTTGGGGTAGGCAGCACAACAGAATGTGAAAGAT...AGTGTGCTGGATTTGACCAATCCTTACCCCCACTATAAAGAGAACCCGTGATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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| CDS-3UTR CAA 90 bp | TGGAACTGTTTTCTTCAACAGCAAGATGGTTGGTTGCCCCGTGTAGCTGGTTTCCTTTTGACTTCTGTTTaGCAGAAAGCCGCCTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: WNCFLQQQDGWLPRVAGFLLTSV*QKAAFL Trigger: TAAAAAGGCGGCTTTCTGCAAAACAGAAGTCAAAAG...GAAACCAGCTACACGGGGCAACCAACCATCTTGCTGTTGAAGAAAACAGTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000397942.4 |
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