Pregenerated sensors for SOCS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000185338Ensembl transcript IDs: ENST00000332029.3, ENST00000332029.4, ENST00000644787.1
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTAGGAGGTGCGAGTTCAGGTCCTGGCTCCAGATACAGTTAAGCTaGTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGGGA | + |
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Preference number: 1 (lower is better) Translates to: GRRCEFRSWLQIQLS*YNNQGDPEGAPGGG Trigger: TCCCCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAGGACCTGAACTCGCACCTCCTACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000332029.3 ENST00000644787.1 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGGGGACCCCCTCAAGAGGTaGGAAGGGGTCTGCGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: TVKLLQQPGGPRGSTRRGDPLKR*EGVCGL Trigger: GAGGCCGCAGACCCCTTCTCACCTCTTGAGGGGGTC...CCCCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000332029.3 ENST00000644787.1 |
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| 3UTR-3UTR TCA 90 bp | CAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGGGAGACCCCCTCAAGAGGTaGGAAGGGGTCTGCGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: QLSCYNNQGDPEGAPGGGDPLKR*EGVCGL Trigger: GAGGCCGCAGACCCCTTCTCACCTCTTGAGGGGGTC...TCCCCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000332029.3 ENST00000644787.1 |
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| 3UTR-3UTR CCA 90 bp | ATACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGGGGAGGGTACCCACATaGTTCCAGGCAAGTAATAAC | + |
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Preference number: 2 (lower is better) Translates to: IQLSCYNNQGDPEGAPGGGRVPT*FQASNN Trigger: GTTATTACTTGCCTGGAACCATGTGGGTACCCTCCC...CCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTAT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENST00000332029.3 ENST00000644787.1 |
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| 3UTR-3UTR CCA 90 bp | GAGTTCAGGTCCTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGGACGGGAGGGTACCCACATaGTTCCAGGCAAGTAATAAC | + |
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Preference number: 2 (lower is better) Translates to: EFRSWLQIQLSCYNNQGDGRVPT*FQASNN Trigger: GTTATTACTTGCCTGGAACCATGTGGGTACCCTCCC...GTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAGGACCTGAACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000332029.3 ENST00000644787.1 |
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| 3UTR GCA 72 bp | TGCGAGTTCAGGTCCTGGCTCCAGATACAGTTAAGCTaGTACAACAACCAGGGGGACCCAGAGGGAGCACCA | + |
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Preference number: 3 (lower is better) Translates to: CEFRSWLQIQLS*YNNQGDPEGAP Trigger: TGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAGGACCTGAACTCGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000332029.3 ENST00000644787.1 |
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| CDS-3UTR TCA 90 bp | GGACCCCCTCAAGAGGTGAGAAGGGGTCTGCGGCCTCGTCTCCAGCCGAGGGCGGCGCGCTGGCGCGCGTaGTGCGCCGGTAATCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: GPPQEVRRGLRPRLQPRAARWRA*CAGNRR Trigger: ACGCCGATTACCGGCGCATCACGCGCGCCAGCGCGC...CGCCCTCGGCTGGAGACGAGGCCGCAGACCCCTTCTCACCTCTTGAGGGGGTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | GGACCCCCTCAAGAGGTGAGAAGGGGTCTGCGGCCTCGTCTCCAGCCGAGGGCGGCCGGAGAAAGGCTGTaGTGCGGGAGCCCCGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: GPPQEVRRGLRPRLQPRAAGERL*CGSPAR Trigger: GCGCGCGGGGCTCCCGCAGCACAGCCTTTCTCCGGC...CGCCCTCGGCTGGAGACGAGGCCGCAGACCCCTTCTCACCTCTTGAGGGGGTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR TCA 90 bp | GGACCCCCTCAAGAGGTGAGAAGGGGTCTGCGGCCTCGTCTCCAGCCGAGGGCGGGAGAGACAAAGAGGTaGGCTGGGGCGCTGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GPPQEVRRGLRPRLQPRAGETKR*AGALRG Trigger: GCCCCGCAGCGCCCCAGCTCACCTCTTTGTCTCTCC...CGCCCTCGGCTGGAGACGAGGCCGCAGACCCCTTCTCACCTCTTGAGGGGGTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | GGACCCCCTCAAGAGGTGAGAAGGGGTCTGCGGCCTCGTCTCCAGCCGAGGGCGGATCCGCGCCTGGTCTaGGCGATTTGGGCTAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GPPQEVRRGLRPRLQPRADPRLV*AIWARA Trigger: GGCCCTAGCCCAAATCGCCCAGACCAGGCGCGGATC...CGCCCTCGGCTGGAGACGAGGCCGCAGACCCCTTCTCACCTCTTGAGGGGGTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | GGACCCCCTCAAGAGGTGAGAAGGGGTCTGCGGCCTCGTCTCCAGCCGAGGGCGGAAAGTGCACGCGGATaGTCGTGGGTCCCGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GPPQEVRRGLRPRLQPRAESARG*SWVPRP Trigger: TGGCCTCGGGACCCACGAGCATCCGCGTGCACTTTC...CGCCCTCGGCTGGAGACGAGGCCGCAGACCCCTTCTCACCTCTTGAGGGGGTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | ACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGGGGGAGAAAGGCTGTGCTaGGGGAGCCCCGCGCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: TVKLLQQPGGPRGSTRRGGERLC*GSPARG Trigger: CCCGCGCGCGGGGCTCCCGCAGCACAGCCTTTCTCC...CCCCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGT 67% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | GGACCCCCTCAAGAGGTGAGAAGGGGTCTGCGGCCTCGTCTCCAGCCGAGGGCGCTGGTCTGGGCGATTTaGGCTAGGGCCGGAGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: GPPQEVRRGLRPRLQPRALVWAI*ARAGER Trigger: CCTTTCTCCGGCCCTAGCCCAAATCGCCCAGACCAG...CGCCCTCGGCTGGAGACGAGGCCGCAGACCCCTTCTCACCTCTTGAGGGGGTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | CTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCCAGGAGCCGTGCAGCTaGCACGGCCGCAGCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: LAPDTVKLLQQPGGPRGSQEPCS*HGRSSL Trigger: GAGCGAGCTGCGGCCGTGGCAGCTGCACGGCTCCTG...GCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | ACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGGGCCAGTTAATGCTGCGTaGACGGCGGGCGCTGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: TVKLLQQPGGPRGSTRRGPVNAA*TAGAAG Trigger: ACCGGCAGCGCCCGCCGTGCACGCAGCATTAACTGG...CCCCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | CAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGGGACCGCCGTCGGGGCTCTaGTGCTGTGGAGACTGCATT | + |
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Preference number: 4 (lower is better) Translates to: QLSCYNNQGDPEGAPGGGPPSGL*CCGDCI Trigger: AATGCAGTCTCCACAGCAGCAGAGCCCCGACGGCGG...TCCCCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | CAGGTCCTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGCCTGCTGGCCAGGCTaGGATCCGCGCCTGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QVLAPDTVKLLQQPGGPRACWPG*DPRLVW Trigger: CCAGACCAGGCGCGGATCCCAGCCTGGCCAGCAGGC...TCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAGGACCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR TCA 90 bp | CTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCGACCCCCTCAAGAGGTaGGAAGGGGTCTGCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LAPDTVKLLQQPGGPRGSDPLKR*EGVCGL Trigger: GAGGCCGCAGACCCCTTCTCACCTCTTGAGGGGGTC...GCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | CAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGGGACCGTCGGGGCTCTGCTaGTGTGGAGACTGCATTGTC | + |
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Preference number: 4 (lower is better) Translates to: QLSCYNNQGDPEGAPGGGPSGLC*CGDCIV Trigger: GACAATGCAGTCTCCACAGCAGCAGAGCCCCGACGG...TCCCCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | ATACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGGTGCACGGCGGGCGCTaGCGGTCAAATCTGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: IQLSCYNNQGDPEGAPGGVHGGR*RSNLEG Trigger: CCCTTCCAGATTTGACCGGCAGCGCCCGCCGTGCAC...CCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | GTGCGAGTTCAGGTCCTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGGCTCGCCCGACTCCTaGCTGCCCTGGACTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: VRVQVLAPDTVKLLQQPGGSPDS*LPWTPL Trigger: GAGGGGAGTCCAGGGCAGCCAGGAGTCGGGCGAGCC...CCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAGGACCTGAACTCGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | CAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGGGATGCTGCTGTGGAGACTaGATTGTCGGCTGCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: QLSCYNNQGDPEGAPGGGCCCGD*IVGCHL Trigger: CAGGTGGCAGCCGACAATGCAGTCTCCACAGCAGCA...TCCCCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | ATACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGCGAAGCTCTCGCGGCTaGCATCCAGGTGAAAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: IQLSCYNNQGDPEGAPGGRSSRG*HPGESG Trigger: GCCGCTTTCACCTGGATGGCAGCCGCGAGAGCTTCG...CCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | CTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCCATAGCGTCCGGGGGTaGGCTGCGGGAGAGACAAAG | + |
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Preference number: 4 (lower is better) Translates to: LAPDTVKLLQQPGGPRGSHSVRG*AAGETK Trigger: CTTTGTCTCTCCCGCAGCGCACCCCCGGACGCTATG...GCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | CTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCGCACGCGGATGCTCGTaGGTCCCGAGGCCATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LAPDTVKLLQQPGGPRGSARGCS*VPRPSS Trigger: TGAAGATGGCCTCGGGACCCACGAGCATCCGCGTGC...GCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | ATATGTAAACATGAAGAGGTAGGAGGTGCGAGTTCAGGTCCTGGCTCCAGATACGGCGGCTCTCGCGCATaGTCCGGGGCCAGGAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: ICKHEEVGGASSGPGSRYGGSRA*SGARSR Trigger: ACGGCTCCTGGCCCCGGAGCATGCGCGAGAGCCGCC...GTATCTGGAGCCAGGACCTGAACTCGCACCTCCTACCTCTTCATGTTTACATAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | CAGGTCCTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGACGTGCGAACGGAATGTaGGGAAGTGCGTGTCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: QVLAPDTVKLLQQPGGPRRANGM*GSACRR Trigger: CCGGCGACACGCACTTCCGCACATTCCGTTCGCACG...TCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAGGACCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | ATATGTAAACATGAAGAGGTAGGAGGTGCGAGTTCAGGTCCTGGCTCCAGATACGCCGCGACCCCATTCTaGAGCCCCCGAGGCTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: ICKHEEVGGASSGPGSRYAATPF*SPRGSP Trigger: GGGCGAGCCTCGGGGGCTGCAGAATGGGGTCGCGGC...GTATCTGGAGCCAGGACCTGAACTCGCACCTCCTACCTCTTCATGTTTACATAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | ATATGTAAACATGAAGAGGTAGGAGGTGCGAGTTCAGGTCCTGGCTCCAGATACGGCCAGCCGGAGGGGTaGGCCATAGCGTCCGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: ICKHEEVGGASSGPGSRYGQPEG*AIASGG Trigger: ACCCCCGGACGCTATGGCCCACCCCTCCGGCTGGCC...GTATCTGGAGCCAGGACCTGAACTCGCACCTCCTACCTCTTCATGTTTACATAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | GAGTTCAGGTCCTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGGACAGAGGAGGAAGGTTCTaGCCGCCGTCGGGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: EFRSWLQIQLSCYNNQGDRGGRF*PPSGLC Trigger: GCAGAGCCCCGACGGCGGCCAGAACCTTCCTCCTCT...GTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAGGACCTGAACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | ATACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGAAAAAGCAGTTCCGCTaGCGGCTGTCGCGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: IQLSCYNNQGDPEGAPGGKKQFR*RLSRTR Trigger: CCTGGTGCGCGACAGCCGCCAGCGGAACTGCTTTTT...CCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | ATATGTAAACATGAAGAGGTAGGAGGTGCGAGTTCAGGTCCTGGCTCCAGATACTCTCGCGGCCCACGGTaGCCACGATGCGCTGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: ICKHEEVGGASSGPGSRYSRGPR*PRCAGG Trigger: GCCGCCAGCGCATCGTGGCCACCGTGGGCCGCGAGA...GTATCTGGAGCCAGGACCTGAACTCGCACCTCCTACCTCTTCATGTTTACATAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | CAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGGGATGCCACCTGGTTGTGTaGTACCATCCTACAGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: QLSCYNNQGDPEGAPGGGCHLVV*YHPTEG Trigger: CCCTTCTGTAGGATGGTAGCACACAACCAGGTGGCA...TCCCCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | CAGGTCCTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGGCTCTGCTGCTGTaGAGACTGCATTGTCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QVLAPDTVKLLQQPGGPRGALLL*RLHCRL Trigger: CAGCCGACAATGCAGTCTCCACAGCAGCAGAGCCCC...TCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAGGACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | GTGCGAGTTCAGGTCCTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGCTGGGATCCGCGCCTaGTCTGGGCGATTTGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: VRVQVLAPDTVKLLQQPGAGIRA*SGRFGL Trigger: TAGCCCAAATCGCCCAGACCAGGCGCGGATCCCAGC...CCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAGGACCTGAACTCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | ATATGTAAACATGAAGAGGTAGGAGGTGCGAGTTCAGGTCCTGGCTCCAGATACGAGAGCAGCCGGTTCTaGCTCCAGCCGTCCGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: ICKHEEVGGASSGPGSRYESSRF*LQPSGP Trigger: GGGGCCGGACGGCTGGAGCCAGAACCGGCTGCTCTC...GTATCTGGAGCCAGGACCTGAACTCGCACCTCCTACCTCTTCATGTTTACATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | CAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGGGAGACACAGCTAGAAAATaGGCTCTGTACTCCGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: QLSCYNNQGDPEGAPGGGDTARK*ALYSAE Trigger: CTCCGCGGAGTACAGAGCCCATTTTCTAGCTGTGTC...TCCCCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | ATATGTAAACATGAAGAGGTAGGAGGTGCGAGTTCAGGTCCTGGCTCCAGATACGACAAAGAGGTGAGCTaGGGCGCTGCGGGGCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: ICKHEEVGGASSGPGSRYDKEVS*GAAGPG Trigger: GCCCGGCCCCGCAGCGCCCCAGCTCACCTCTTTGTC...GTATCTGGAGCCAGGACCTGAACTCGCACCTCCTACCTCTTCATGTTTACATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | CTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCTTGTCGGCTGCCACCTaGTTGTGTGCTACCATCCTA | + |
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Preference number: 4 (lower is better) Translates to: LAPDTVKLLQQPGGPRGSLSAAT*LCATIL Trigger: TAGGATGGTAGCACACAACCAGGTGGCAGCCGACAA...GCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | GTGCGAGTTCAGGTCCTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGCTGCCGGTCAAATCTaGAAGGGGAAGGAGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: VRVQVLAPDTVKLLQQPGAAGQI*KGKELR Trigger: CCTGAGCTCCTTCCCCTTCCAGATTTGACCGGCAGC...CCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAGGACCTGAACTCGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | GTGCGAGTTCAGGTCCTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGACTGCATTGTCGGCTaGCACCTGGTTGTGTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: VRVQVLAPDTVKLLQQPGDCIVG*HLVVCY Trigger: GTAGCACACAACCAGGTGGCAGCCGACAATGCAGTC...CCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAGGACCTGAACTCGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | ACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGGGCCAACCCCTGGTTTGTaGAAAGATACTGGGTATATG | + |
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Preference number: 4 (lower is better) Translates to: TVKLLQQPGGPRGSTRRGPTPGL*KDTGYM Trigger: CATATACCCAGTATCTTTGCACAAACCAGGGGTTGG...CCCCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | CTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCGGGAGGGTACCCACATaGTTCCAGGCAAGTAATAAC | + |
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Preference number: 4 (lower is better) Translates to: LAPDTVKLLQQPGGPRGSGRVPT*FQASNN Trigger: GTTATTACTTGCCTGGAACCATGTGGGTACCCTCCC...GCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | ATACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGTGCGAGTTCAGGTCCTaGCTCCAGATACAGTTAAGC | + |
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Preference number: 4 (lower is better) Translates to: IQLSCYNNQGDPEGAPGGCEFRS*LQIQLS Trigger: GCTTAACTGTATCTGGAGCCAGGACCTGAACTCGCA...CCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CCA 90 bp | GTGCGAGTTCAGGTCCTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGCCCTCCCCCAACCCCTaGTTTGTGCAAAGATACTGG | + |
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Preference number: 4 (lower is better) Translates to: VRVQVLAPDTVKLLQQPGPSPNP*FVQRYW Trigger: CCAGTATCTTTGCACAAACCAGGGGTTGGGGGAGGG...CCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAGGACCTGAACTCGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR GCA 90 bp | ATATGTAAACATGAAGAGGTAGGAGGTGCGAGTTCAGGTCCTGGCTCCAGATACCAGATACAGTTAAGCTaGTACAACAACCAGGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: ICKHEEVGGASSGPGSRYQIQLS*YNNQGD Trigger: GTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTG...GTATCTGGAGCCAGGACCTGAACTCGCACCTCCTACCTCTTCATGTTTACATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS GCA 90 bp | GGGCGAAAAAGCAGTTCCGCTGGCGGCTGTCGCGCACCAGGAAGGTaGCCACGGGCTCGGCGCGCAGCCGCTCGTGCGCCCCGTGCACGC | + |
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Preference number: 5 (lower is better) Translates to: GRKSSSAGGCRAPGR*PRARRAAARAPRAR Trigger: GCGTGCACGGGGCGCACGAGCGGCTGCGCGCCGAGCCCGTGGGCACCTTCCTGGTGCGCGACAGCCGCCAGCGGAACTGCTTTTTCGCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS CCA 90 bp | GCCGCCTGCTGGCCAGGCTGGGATCCGCGCCTGGTCTGGGCGATTTaGGCTAGGGCCGGAGAAAGGCTGTGCTGCGGGAGCCCCGCGCGC | + |
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Preference number: 5 (lower is better) Translates to: AACWPGWDPRLVWAI*ARAGERLCCGSPAR Trigger: GCGCGCGGGGCTCCCGCAGCACAGCCTTTCTCCGGCCCTAGCCCAAATCGCCCAGACCAGGCGCGGATCCCAGCCTGGCCAGCAGGCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS TCA 90 bp | GCCCCCAGTAGAATCCGCAGGCGTCCAGGAGCGCGCTGGCGCGCGTaGTGCGCCGGTAATCGGCGTGCGAACGGAATGTGCGGAAGTGCG | + |
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Preference number: 5 (lower is better) Translates to: APSRIRRRPGARWRA*CAGNRRANGMCGSA Trigger: CGCACTTCCGCACATTCCGTTCGCACGCCGATTACCGGCGCATCACGCGCGCCAGCGCGCTCCTGGACGCCTGCGGATTCTACTGGGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS CCA 90 bp | GGTCCCGAGGCCATCTTCACGCTAAGGGCGAAAAAGCAGTTCCGCTaGCGGCTGTCGCGCACCAGGAAGGTGCCCACGGGCTCGGCGCGC | + |
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Preference number: 5 (lower is better) Translates to: GPEAIFTLRAKKQFR*RLSRTRKVPTGSAR Trigger: GCGCGCCGAGCCCGTGGGCACCTTCCTGGTGCGCGACAGCCGCCAGCGGAACTGCTTTTTCGCCCTTAGCGTGAAGATGGCCTCGGGACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS GCA 90 bp | TGGCCGCCGTCGGGGCTCTGCTGCTGTGGAGACTGCATTGTCGGCTaGCACCTGGTTGTGTGCTACCATCCTACAGAAGGGGCCAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: WPPSGLCCCGDCIVG*HLVVCYHPTEGASR Trigger: CCGGCTGGCCCCTTCTGTAGGATGGTAGCACACAACCAGGTGGCAGCCGACAATGCAGTCTCCACAGCAGCAGAGCCCCGACGGCGGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS GCA 90 bp | GGAGGAGGAAGAGGAGGAAGGTTCTGGCCGCCGTCGGGGCTCTGCTaGTGTGGAGACTGCATTGTCGGCTGCCACCTGGTTGTGTGCTAC | + |
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Preference number: 5 (lower is better) Translates to: GGGRGGRFWPPSGLC*CGDCIVGCHLVVCY Trigger: GTAGCACACAACCAGGTGGCAGCCGACAATGCAGTCTCCACAGCAGCAGAGCCCCGACGGCGGCCAGAACCTTCCTCCTCTTCCTCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS CCA 90 bp | AGGAAGAGGAGGAAGGTTCTGGCCGCCGTCGGGGCTCTGCTGCTGTaGAGACTGCATTGTCGGCTGCCACCTGGTTGTGTGCTACCATCC | + |
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Preference number: 5 (lower is better) Translates to: RKRRKVLAAVGALLL*RLHCRLPPGCVLPS Trigger: GGATGGTAGCACACAACCAGGTGGCAGCCGACAATGCAGTCTCCACAGCAGCAGAGCCCCGACGGCGGCCAGAACCTTCCTCCTCTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS GCA 90 bp | GGAGGAAGGTTCTGGCCGCCGTCGGGGCTCTGCTGCTGTGGAGACTaGATTGTCGGCTGCCACCTGGTTGTGTGCTACCATCCTACAGAA | + |
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Preference number: 5 (lower is better) Translates to: GGRFWPPSGLCCCGD*IVGCHLVVCYHPTE Trigger: TTCTGTAGGATGGTAGCACACAACCAGGTGGCAGCCGACAATGCAGTCTCCACAGCAGCAGAGCCCCGACGGCGGCCAGAACCTTCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS-3UTR CAA 90 bp | ACAGTTAAGCTGCTACAACAACCAGGGGGACCCAGAGGGAGCACCAGGAGGGGGCCCCCAACCCCTGGTTaGTGCAAAGATACTGGGTAT | + |
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Preference number: 5 (lower is better) Translates to: TVKLLQQPGGPRGSTRRGPPTPG*CKDTGY Trigger: ATACCCAGTATCTTTGCACAAACCAGGGGTTGGGGG...CCCCCTCCTGGTGCTCCCTCTGGGTCCCCCTGGTTGTTGTAGCAGCTTAACTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS-3UTR CAA 90 bp | GAGTTCAGGTCCTGGCTCCAGATACAGTTAAGCTGCTACAACAACCAGGGGGACTCGGCTGCCACCTGGTaGTGTGCTACCATCCTACAG | + |
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Preference number: 5 (lower is better) Translates to: EFRSWLQIQLSCYNNQGDSAATW*CATILQ Trigger: CTGTAGGATGGTAGCACACAACCAGGTGGCAGCCGA...GTCCCCCTGGTTGTTGTAGCAGCTTAACTGTATCTGGAGCCAGGACCTGAACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS CCA 72 bp | CCGGGGGTGCGCTGCGGGAGAGACAAAGAGGTGAGCTaGGGCGCTGCGGGGCCGGGCAGGTGTGCGCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: PGVRCGRDKEVS*GAAGPGRCAPA Trigger: GGCCGGCGCACACCTGCCCGGCCCCGCAGCGCCCCAGCTCACCTCTTTGTCTCTCCCGCAGCGCACCCCCGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS GCA 72 bp | AGCAGTTCCGCTGGCGGCTGTCGCGCACCAGGAAGGTaGCCACGGGCTCGGCGCGCAGCCGCTCGTGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: SSSAGGCRAPGR*PRARRAAARAP Trigger: GGGCGCACGAGCGGCTGCGCGCCGAGCCCGTGGGCACCTTCCTGGTGCGCGACAGCCGCCAGCGGAACTGCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS CCA 72 bp | ACTCCGCGGAGCTCTTCCCGGCGGGTGGGGGCTCGGTaGAGGCGGAGTCCGGCCTCCGGGCAGCACCGAGAG | + |
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Preference number: 6 (lower is better) Translates to: TPRSSSRRVGAR*RRSPASGQHRE Trigger: CTCTCGGTGCTGCCCGGAGGCCGGACTCCGCCTCCACCGAGCCCCCACCCGCCGGGAAGAGCTCCGCGGAGT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS CCA 72 bp | GCCGCCTGCTGGCCAGGCTGGGATCCGCGCCTGGTCTaGGCGATTTGGGCTAGGGCCGGAGAAAGGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: AACWPGWDPRLV*AIWARAGERLC Trigger: GCACAGCCTTTCTCCGGCCCTAGCCCAAATCGCCCAGACCAGGCGCGGATCCCAGCCTGGCCAGCAGGCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644787.1 |
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| CDS TCA 72 bp | AGAATCCGCAGGCGTCCAGGAGCGCGCTGGCGCGCGTaGTGCGCCGGTAATCGGCGTGCGAACGGAATGTGC | + |
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Preference number: 6 (lower is better) Translates to: RIRRRPGARWRA*CAGNRRANGMC Trigger: GCACATTCCGTTCGCACGCCGATTACCGGCGCATCACGCGCGCCAGCGCGCTCCTGGACGCCTGCGGATTCT 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS GCA 72 bp | AGAGGAGGAAGGTTCTGGCCGCCGTCGGGGCTCTGCTaGTGTGGAGACTGCATTGTCGGCTGCCACCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: RGGRFWPPSGLC*CGDCIVGCHLV Trigger: AACCAGGTGGCAGCCGACAATGCAGTCTCCACAGCAGCAGAGCCCCGACGGCGGCCAGAACCTTCCTCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS CCA 72 bp | AGGAAGGTTCTGGCCGCCGTCGGGGCTCTGCTGCTGTaGAGACTGCATTGTCGGCTGCCACCTGGTTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RKVLAAVGALLL*RLHCRLPPGCV Trigger: CACACAACCAGGTGGCAGCCGACAATGCAGTCTCCACAGCAGCAGAGCCCCGACGGCGGCCAGAACCTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS CAA 72 bp | GGCCGCCGTCGGGGCTCTGCTGCTGTGGAGACTGCATaGTCGGCTGCCACCTGGTTGTGTGCTACCATCCTA | + |
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Preference number: 6 (lower is better) Translates to: GRRRGSAAVETA*SAATWLCATIL Trigger: TAGGATGGTAGCACACAACCAGGTGGCAGCCGACAATGCAGTCTCCACAGCAGCAGAGCCCCGACGGCGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS CAA 90 bp | GAAGGTTCTGGCCGCCGTCGGGGCTCTGCTGCTGTGGAGACTGCATaGTCGGCTGCCACCTGGTTGTGTGCTACCATCCTACAGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: EGSGRRRGSAAVETA*SAATWLCATILQKG Trigger: CCCCTTCTGTAGGATGGTAGCACACAACCAGGTGGCAGCCGACAATGCAGTCTCCACAGCAGCAGAGCCCCGACGGCGGCCAGAACCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS GCA 72 bp | TTCTGGCCGCCGTCGGGGCTCTGCTGCTGTGGAGACTaGATTGTCGGCTGCCACCTGGTTGTGTGCTACCAT | + |
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Preference number: 6 (lower is better) Translates to: FWPPSGLCCCGD*IVGCHLVVCYH Trigger: ATGGTAGCACACAACCAGGTGGCAGCCGACAATGCAGTCTCCACAGCAGCAGAGCCCCGACGGCGGCCAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS GCA 72 bp | TGTGGAGACTGCATTGTCGGCTGCCACCTGGTTGTGTaGTACCATCCTACAGAAGGGGCCAGCCGGAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: CGDCIVGCHLVV*YHPTEGASRRG Trigger: ACCCCTCCGGCTGGCCCCTTCTGTAGGATGGTAGCACACAACCAGGTGGCAGCCGACAATGCAGTCTCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS CAA 72 bp | GCTGCTGTGGAGACTGCATTGTCGGCTGCCACCTGGTaGTGTGCTACCATCCTACAGAAGGGGCCAGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: AAVETALSAATW*CATILQKGPAG Trigger: TCCGGCTGGCCCCTTCTGTAGGATGGTAGCACACAACCAGGTGGCAGCCGACAATGCAGTCTCCACAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS GCA 72 bp | TCGGGGCTCTGCTGCTGTGGAGACTGCATTGTCGGCTaGCACCTGGTTGTGTGCTACCATCCTACAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: SGLCCCGDCIVG*HLVVCYHPTEG Trigger: CCCTTCTGTAGGATGGTAGCACACAACCAGGTGGCAGCCGACAATGCAGTCTCCACAGCAGCAGAGCCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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| CDS CCA 72 bp | TCTGCTGCTGTGGAGACTGCATTGTCGGCTGCCACCTaGTTGTGTGCTACCATCCTACAGAAGGGGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SAAVETALSAAT*LCATILQKGPA Trigger: GGCTGGCCCCTTCTGTAGGATGGTAGCACACAACCAGGTGGCAGCCGACAATGCAGTCTCCACAGCAGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332029.4 ENST00000644787.1 |
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