RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SOBP (Homo sapiens)

Ensembl gene IDs: ENSG00000112320

Ensembl transcript IDs: ENST00000317357.10, ENST00000477448.1, ENST00000494935.1, ENST00000618129.1

Found 424 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTCTGGGGAGAAGCAGAGATGGTGGCAGCAGGAAGGCTGGGCCTaGTTGGTGGGTCCAAGATGCGCGGGCTTCTCTGGGCTAGAGGCC +
Preference number: 1 (lower is better)
Translates to: SSGEKQRWWQQEGWA*LVGPRCAGFSGLEA
Trigger: GGCCTCTAGCCCAGAGAAGCCCGCGCATCTTGGACCCACCAAGCAGGCCCAGCCTTCCTGCTGCCACCATCTCTGCTTCTCCCCAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 90 bp TATCAGGACAACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTaGCTGGGCTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATA +
Preference number: 1 (lower is better)
Translates to: YQDNHSRVPRPLARP*LGLPRQSSDGVTAI
Trigger: TATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGTTGTCCTGATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR GCA 90 bp GGCCAAGACCAGATGAATAATGCTATCAGGACAACCACAGCCGGGTaGCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGA +
Preference number: 1 (lower is better)
Translates to: GQDQMNNAIRTTTAG*LGRWHVLGWACLGR
Trigger: TCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGTTGTCCTGATAGCATTATTCATCTGGTCTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 90 bp ATGAATAATGCTATCAGGACAACCACAGCCGGGTGCCTCGGCCGCTaGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGACGGAG +
Preference number: 1 (lower is better)
Translates to: MNNAIRTTTAGCLGR*HVLGWACLGRVQTE
Trigger: CTCCGTCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGTTGTCCTGATAGCATTATTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 90 bp AAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTaGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTGCCCACCC +
Preference number: 1 (lower is better)
Translates to: KENLEIQYVHRILGP*CFKAGATPSWPCPP
Trigger: GGGTGGGCAGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 90 bp CAGGCCCTGGAACGGACGGAGTGGGCTCTTGTCTGCAGACAAGCGTaGTCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTAC +
Preference number: 1 (lower is better)
Translates to: QALERTEWALVCRQA*SSRSGRDSAIPVAY
Trigger: GTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGACCACGCTTGTCTGCAGACAAGAGCCCACTCCGTCCGTTCCAGGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR GCA 90 bp ATGGTTAGGAAGCAGGCCCTGGAACGGACGGAGTGGGCTCTTGTCTaGAGACAAGCGTGGTCTAGCAGGTCAGGAAGAGACAGTGCCATC +
Preference number: 1 (lower is better)
Translates to: MVRKQALERTEWALV*RQAWSSRSGRDSAI
Trigger: GATGGCACTGTCTCTTCCTGACCTGCTAGACCACGCTTGTCTGCAGACAAGAGCCCACTCCGTCCGTTCCAGGGCCTGCTTCCTAACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 90 bp TCAGTGATGGGCATGGTTAGGAAGCAGGCCCTGGAACGGACGGAGTaGGCTCTTGTCTGCAGACAAGCGTGGTCTAGCAGGTCAGGAAGA +
Preference number: 1 (lower is better)
Translates to: SVMGMVRKQALERTE*ALVCRQAWSSRSGR
Trigger: TCTTCCTGACCTGCTAGACCACGCTTGTCTGCAGACAAGAGCCCACTCCGTCCGTTCCAGGGCCTGCTTCCTAACCATGCCCATCACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 90 bp CTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTaGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTG +
Preference number: 1 (lower is better)
Translates to: LYKGESRNTVCTPHP*AVVLQGWRHTVLAL
Trigger: CAGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR TCA 90 bp GCAAAATCAATATCCTGGATGACTGTCTCCATGGCCAAGACCAGATaGATAATGCTATCAGGACAACCACAGCCGGGTGCCTCGGCCGCT +
Preference number: 1 (lower is better)
Translates to: AKSISWMTVSMAKTR*IMLSGQPQPGASAA
Trigger: AGCGGCCGAGGCACCCGGCTGTGGTTGTCCTGATAGCATTATTCATCTGGTCTTGGCCATGGAGACAGTCATCCAGGATATTGATTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR TCA 90 bp TTGTGTTCCAATCCATATCATCTTCCAGCCTCAGTCGCTGAGCCTTaGAGATGGGGCGGGGAGAATACCTACATTGGTCCTTGTGGCTTG +
Preference number: 1 (lower is better)
Translates to: LCSNPYHLPASVAEP*RWGGENTYIGPCGL
Trigger: CAAGCCACAAGGACCAATGTAGGTATTCTCCCCGCCCCATCTTCAAGGCTCAGCGACTGAGGCTGGAAGATGATATGGATTGGAACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR GCA 90 bp TTCTCTGGGCTAGAGGCCATCGAGGGAGGGCTGCTTCCTCTGAGATaGTTAATGACAGGAAGCGGCTTTATTTGCTTGAGTTTTAGCCAG +
Preference number: 1 (lower is better)
Translates to: FSGLEAIEGGLLPLR*LMTGSGFICLSFSQ
Trigger: CTGGCTAAAACTCAAGCAAATAAAGCCGCTTCCTGTCATTAAGCATCTCAGAGGAAGCAGCCCTCCCTCGATGGCCTCTAGCCCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR GCA 90 bp ATGGGATACTCCACAACTGTCTCACCAACTCAGTGCCAGTACACATaGTCTAGAGGACTTCTGGACTCGCAGCTACAACTGTACAAGTGC +
Preference number: 1 (lower is better)
Translates to: MGYSTTVSPTQCQYT*SRGLLDSQLQLYKC
Trigger: GCACTTGTACAGTTGTAGCTGCGAGTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR GCA 90 bp GTACTCATCAGAATGGGATACTCCACAACTGTCTCACCAACTCAGTaGCAGTACACATGCTCTAGAGGACTTCTGGACTCGCAGCTACAA +
Preference number: 1 (lower is better)
Translates to: VLIRMGYSTTVSPTQ*QYTCSRGLLDSQLQ
Trigger: TTGTAGCTGCGAGTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCTGATGAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 90 bp TCACATAAGGCTGAAATAAAAGTCTCTCTAGTCAGTGGGGTGAGATaGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCA +
Preference number: 1 (lower is better)
Translates to: SHKAEIKVSLVSGVR*CVDVSGTRGACLPP
Trigger: TGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACCCCACTGACTAGAGAGACTTTTATTTCAGCCTTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR TCA 90 bp GAGGACTTCTGGACTCGCAGCTACAACTGTACAAGTGCACACAAGTaGATCTACCCTGTTATCCTCCACCCACTGATTGAGGATCGAATT +
Preference number: 1 (lower is better)
Translates to: EDFWTRSYNCTSAHK*IYPVILHPLIEDRI
Trigger: AATTCGATCCTCAATCAGTGGGTGGAGGATAACAGGGTAGATTCACTTGTGTGCACTTGTACAGTTGTAGCTGCGAGTCCAGAAGTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 90 bp ATGGCAGAGCTGGCATTAGCAACCCAGGTCTCCTGGTTCTTGCTCTaGCAGTCTTCACCACCTCATGCTACCATTCAAATTATACATTTC +
Preference number: 1 (lower is better)
Translates to: MAELALATQVSWFLL*QSSPPHATIQIIHF
Trigger: GAAATGTATAATTTGAATGGTAGCATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACCTGGGTTGCTAATGCCAGCTCTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
3UTR TCA 90 bp AAGTGCACACAAGTGAATCTACCCTGTTATCCTCCACCCACTGATTaGGGATCGAATTGCACATTTCTCTTAACCATGACAGGAGAAAGC +
Preference number: 1 (lower is better)
Translates to: KCTQVNLPCYPPPTD*GSNCTFLLTMTGES
Trigger: GCTTTCTCCTGTCATGGTTAAGAGAAATGTGCAATTCGATCCTCAATCAGTGGGTGGAGGATAACAGGGTAGATTCACTTGTGTGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR TCA 90 bp GTACAAGTGCACACAAGTGAATCTACCCTGTTATCCTCCACCCACTaGTTGAGGATCGAATTGCACATTTCTCTTAACCATGACAGGAGA +
Preference number: 1 (lower is better)
Translates to: VQVHTSESTLLSSTH*LRIELHISLNHDRR
Trigger: TCTCCTGTCATGGTTAAGAGAAATGTGCAATTCGATCCTCAATCAGTGGGTGGAGGATAACAGGGTAGATTCACTTGTGTGCACTTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR TCA 90 bp TTTGATATCCCAAGAGAATTGTGCATTCAGACAGCAGTAAGATCGTaGGAAGGAAGAGGAGGAAAAGGGGTGCTGATGGCTTATGAGATG +
Preference number: 1 (lower is better)
Translates to: FDIPRELCIQTAVRS*EGRGGKGVLMAYEM
Trigger: CATCTCATAAGCCATCAGCACCCCTTTTCCTCCTCTTCCTTCTCACGATCTTACTGCTGTCTGAATGCACAATTCTCTTGGGATATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR TCA 90 bp TCTAATTATCATGAAAGGGCTCTGCATATAGAGAGATTGTCTCACTaGCTTCCTGGATCACCGAAAACCATCAGGGTTGAAATTTCATCT +
Preference number: 1 (lower is better)
Translates to: SNYHERALHIERLSH*LPGSPKTIRVEISS
Trigger: AGATGAAATTTCAACCCTGATGGTTTTCGGTGATCCAGGAAGTCAGTGAGACAATCTCTCTATATGCAGAGCCCTTTCATGATAATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR GCA 90 bp GTTCTTGATTATCTGCCTATAGACTTTTTGCTACTCCACTTTAATTaGCCTTGTAGTCCTACCATGCACCTTCCATATGCAACTAAAATT +
Preference number: 1 (lower is better)
Translates to: VLDYLPIDFLLLHFN*PCSPTMHLPYATKI
Trigger: AATTTTAGTTGCATATGGAAGGTGCATGGTAGGACTACAAGGGCAATTAAAGTGGAGTAGCAAAAAGTCTATAGGCAGATAATCAAGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618129.1
3UTR-3UTR CCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGAGGCGCCACACCGTCCTaGCCCTGCCCACCCGCAACT +
Preference number: 2 (lower is better)
Translates to: GASAAGTSLAGLASAEFRGATPS*PCPPAT
Trigger: AGTTGCGGGTGGGCAGGGCCAGGACGGTGTGGCGCC...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR TCA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTTCCAGCCTCAGTCGCTaGGCCTTGAAGATGGGGCGG +
Preference number: 2 (lower is better)
Translates to: TASLGRGASRLAPHRPGPSSLSR*ALKMGR
Trigger: CCGCCCCATCTTCAAGGCTCAGCGACTGAGGCTGGA...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CAA 90 bp CTATCAGGACAACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTaGGCTGGGCTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCAT +
Preference number: 2 (lower is better)
Translates to: LSGQPQPGASAAGTS*AGLASAEFRRSHRH
Trigger: ATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGTTGTCCTGATAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR GCA 90 bp ACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCGTCAGGAAGAGACAGTaGCATCCCAGTAGCTTACCA +
Preference number: 2 (lower is better)
Translates to: TTAGCLGRWHVLGWACLGVRKRQ*HPSSLP
Trigger: TGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGAC...GCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CCA 90 bp ACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCATCCCTAAGTTCCTCTaGGGAGAAGCAGAGATGGTG +
Preference number: 2 (lower is better)
Translates to: TTAGCLGRWHVLGWACLGIPKFL*GEAEMV
Trigger: CACCATCTCTGCTTCTCCCCAGAGGAACTTAGGGAT...GCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CAA 90 bp TCTGGGGAGAAGCAGAGATGGTGGCAGCAGGAAGGCTGGGCCTGCTaGGTGGGTCCAAGATGCGCGGGCTTCTCTGGGCTAGAGGCCATC +
Preference number: 2 (lower is better)
Translates to: SGEKQRWWQQEGWAC*VGPRCAGFSGLEAI
Trigger: GATGGCCTCTAGCCCAGAGAAGCCCGCGCATCTTGGACCCACCAAGCAGGCCCAGCCTTCCTGCTGCCACCATCTCTGCTTCTCCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR TCA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTTGTCATTGGATGGCGTaGCATGGTTTGCTCTGCGCC +
Preference number: 2 (lower is better)
Translates to: TASLGRGASRLAPHRPGPCHWMA*HGLLCA
Trigger: GGCGCAGAGCAAACCATGTCACGCCATCCAATGACA...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CAA 90 bp AACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTaGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATAAATATAACT +
Preference number: 2 (lower is better)
Translates to: NHSRVPRPLARPWLG*PRQSSDGVTAINIT
Trigger: AGTTATATTTATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR TCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGAGCGGCTTTATTTGCTTaGGTTTTAGCCAGAGGGGGT +
Preference number: 2 (lower is better)
Translates to: GASAAGTSLAGLASAEFRAALFA*VLARGG
Trigger: ACCCCCTCTGGCTAAAACTCAAGCAAATAAAGCCGC...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR TCA 90 bp CTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATAAATATAACTCTGCACCACGCCACCCCTCCTGCTaGGGCTCCGCGGCCTTGTGG +
Preference number: 2 (lower is better)
Translates to: LASAEFRRSHRHKYNSAPRHPSC*GSAALW
Trigger: CCACAAGGCCGCGGAGCCTCAGCAGGAGGGGTGGCG...TGGTGCAGAGTTATATTTATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR GCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCAGTGCCAGTACACATaGTCTAGAGGACTTCTGGAC +
Preference number: 2 (lower is better)
Translates to: VHRILGPWCFKAGATPSWQCQYT*SRGLLD
Trigger: GTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTG...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CAA 90 bp TGGGCATGGTTAGGAAGCAGGCCCTGGAACGGACGGAGTGGGCTCTaGTCTGCAGACAAGCGTGGTCTAGCAGGTCAGGAAGAGACAGTG +
Preference number: 2 (lower is better)
Translates to: WAWLGSRPWNGRSGL*SADKRGLAGQEETV
Trigger: CACTGTCTCTTCCTGACCTGCTAGACCACGCTTGTCTGCAGACAAGAGCCCACTCCGTCCGTTCCAGGGCCTGCTTCCTAACCATGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR TCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCTCCACCCACTGATTaGGGATCGAATTGCACATTT +
Preference number: 2 (lower is better)
Translates to: VHRILGPWCFKAGATPSWPPPTD*GSNCTF
Trigger: AAATGTGCAATTCGATCCTCAATCAGTGGGTGGAGG...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR GCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGTCAGTTCAACACTCTTaGTCTGTTCCCAAATGGGGC +
Preference number: 2 (lower is better)
Translates to: VHRILGPWCFKAGATPSWSVQHS*SVPKWG
Trigger: GCCCCATTTGGGAACAGAGCAAGAGTGTTGAACTGA...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CCA 90 bp GTCTCACCAACTCAGTGCCAGTACACATGCTCTAGAGGACTTCTGGACTCGCAGGCTGGGCCTGCTTGGTaGGTCCAAGATGCGCGGGCT +
Preference number: 2 (lower is better)
Translates to: VSPTQCQYTCSRGLLDSQAGPAW*VQDARA
Trigger: AGCCCGCGCATCTTGGACCCACCAAGCAGGCCCAGC...CTGCGAGTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTGAGTTGGTGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR GCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGACTACAACTGTACAAGTaGACACAAGTGAATCTACCC +
Preference number: 2 (lower is better)
Translates to: GASAAGTSLAGLASAEFRLQLYK*TQVNLP
Trigger: GGGTAGATTCACTTGTGTGCACTTGTACAGTTGTAG...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR GCA 90 bp CTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATAAATATAACTCTGCACCAATCTCTCCCCGGGCTTaGGAGCTTCCCCTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: LASAEFRRSHRHKYNSAPISPRA*ELPLPP
Trigger: GGGAGGGAGGGGAAGCTCGCAAGCCCGGGGAGAGAT...TGGTGCAGAGTTATATTTATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGAACCTTGAGGGCATTTTaGTCTTCAGTTCAACACTCT +
Preference number: 2 (lower is better)
Translates to: GASAAGTSLAGLASAEFRTLRAF*SSVQHS
Trigger: AGAGTGTTGAACTGAAGACCAAAATGCCCTCAAGGT...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR GCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTATCCTTGGGCCGTGGTaGTTCAAGGCTGGCGCCACA +
Preference number: 2 (lower is better)
Translates to: GEMVCGCEWNPWSMFASIILGPW*FKAGAT
Trigger: TGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGAT...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR GCA 90 bp TGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTTGATGGTGGGGCGGCTTCTTCCTaGCTGGGTGGGTTTGGTGCT +
Preference number: 2 (lower is better)
Translates to: WCVDVSGTRGACLPPFDGGAASS*LGGFGA
Trigger: AGCACCAAACCCACCCAGGCAGGAAGAAGCCGCCCC...ACCATCAAATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTGGGGAGAAGCAGAGATaGTGGCAGCAGGAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: GEMVCGCEWNPWSMFASIGEKQR*WQQEGW
Trigger: CCAGCCTTCCTGCTGCCACCATCTCTGCTTCTCCCC...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR TCA 90 bp TGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTTGATGGTTCAGTCGCTGAGCCTTaGAGATGGGGCGGGGAGAAT +
Preference number: 2 (lower is better)
Translates to: WCVDVSGTRGACLPPFDGSVAEP*RWGGEN
Trigger: ATTCTCCCCGCCCCATCTTCAAGGCTCAGCGACTGA...ACCATCAAATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR GCA 90 bp CTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATAAATATAACTCTGCACCATGGCGTGACATGGTTTaGTCTGCGCCCTCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: LASAEFRRSHRHKYNSAPWRDMV*SAPSLH
Trigger: ATGGAGAGAGGGCGCAGAGCAAACCATGTCACGCCA...TGGTGCAGAGTTATATTTATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR TCA 90 bp TTTCTGTACTCATCAGAATGGGATACTCCACAACTGTCTCACCAACTCAGTGCCGAGGGGGTGGTGAGCTaGCCAGCTGGTGTCATTGGA +
Preference number: 2 (lower is better)
Translates to: FLYSSEWDTPQLSHQLSAEGVVS*PAGVIG
Trigger: TCCAATGACACCAGCTGGTCAGCTCACCACCCCCTC...GGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCTGATGAGTACAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR GCA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGCAGGAAGGCTGGGCCTaGTTGGTGGGTCCAAGATGC +
Preference number: 2 (lower is better)
Translates to: LCTKENLEIQYVHRILGPQEGWA*LVGPRC
Trigger: GCATCTTGGACCCACCAAGCAGGCCCAGCCTTCCTG...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CCA 90 bp TGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTTGATGGTGTCTGCAGACAAGCGTaGTCTAGCAGGTCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: WCVDVSGTRGACLPPFDGVCRQA*SSRSGR
Trigger: TCTTCCTGACCTGCTAGACCACGCTTGTCTGCAGAC...ACCATCAAATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR GCA 90 bp GCAACCCAGGTCTCCTGGTTCTTGCTCTGGCAGTCTTCACCACCTCATGCTACCCTTGTAGTCCTACCATaGACCTTCCATATGCAACTA +
Preference number: 2 (lower is better)
Translates to: ATQVSWFLLWQSSPPHATLVVLP*TFHMQL
Trigger: TAGTTGCATATGGAAGGTGCATGGTAGGACTACAAG...GGTAGCATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACCTGGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
3UTR-3UTR TCA 90 bp TGTTCCCAAATGGGGCGCTATTTAGGGGAATTTAAAGAGAAAGCTGAGAAGAATAGCCAGAGGGGGTGGTaGGCTGACCAGCTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: CSQMGRYLGEFKEKAEKNSQRGW*ADQLVS
Trigger: TGACACCAGCTGGTCAGCTCACCACCCCCTCTGGCT...ATTCTTCTCAGCTTTCTCTTTAAATTCCCCTAAATAGCGCCCCATTTGGGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR TCA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACGAGAGATTGTCTCACTaGCTTCCTGGATCACCGAAA +
Preference number: 2 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHERLSH*LPGSPK
Trigger: TTTCGGTGATCCAGGAAGTCAGTGAGACAATCTCTC...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR TCA 90 bp CTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATAAATATAACTCTGCACCATTATCCTCCACCCACTaGTTGAGGATCGAATTGCAC +
Preference number: 2 (lower is better)
Translates to: LASAEFRRSHRHKYNSAPLSSTH*LRIELH
Trigger: GTGCAATTCGATCCTCAATCAGTGGGTGGAGGATAA...TGGTGCAGAGTTATATTTATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CCA 90 bp TGTTCCCAAATGGGGCGCTATTTAGGGGAATTTAAAGAGAAAGCTGAGAAGAATATGCGCGGGCTTCTCTaGGCTAGAGGCCATCGAGGG +
Preference number: 2 (lower is better)
Translates to: CSQMGRYLGEFKEKAEKNMRGLL*ARGHRG
Trigger: CCCTCGATGGCCTCTAGCCCAGAGAAGCCCGCGCAT...ATTCTTCTCAGCTTTCTCTTTAAATTCCCCTAAATAGCGCCCCATTTGGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CCA 90 bp TCTCCGCCATCAAAACGTGAACAATATAGGTCCAAAACCGTACAATGCAAATCAAAGGCTGGGCCTGCTTaGTGGGTCCAAGATGCGCGG +
Preference number: 2 (lower is better)
Translates to: SPPSKREQYRSKTVQCKSKAGPA*WVQDAR
Trigger: CCGCGCATCTTGGACCCACCAAGCAGGCCCAGCCTT...TGATTTGCATTGTACGGTTTTGGACCTATATTGTTCACGTTTTGATGGCGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR TCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTAAACAGAATCATGGGTaGTCTTTCTCACTTTCCCTC +
Preference number: 2 (lower is better)
Translates to: GEMVCGCEWNPWSMFASIKQNHG*SFSLSL
Trigger: GAGGGAAAGTGAGAAAGATCACCCATGATTCTGTTT...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAATTGGATGGCGTGACATaGTTTGCTCTGCGCCCTCTC +
Preference number: 2 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKLDGVT*FALRPL
Trigger: GAGAGGGCGCAGAGCAAACCATGTCACGCCATCCAA...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR GCA 90 bp AATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGTCTCACCAACTCAGTaGCAGTACACATGCTCTAGA +
Preference number: 2 (lower is better)
Translates to: NLEIQYVHRILGPWCFKAVSPTQ*QYTCSR
Trigger: TCTAGAGCATGTGTACTGGCACTGAGTTGGTGAGAC...AGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR TCA 90 bp ATCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGATTTTAATGAACATTCATTTTGATGGTGTGTGGATGTaGGTGGAACCCGTGGAGCAT +
Preference number: 2 (lower is better)
Translates to: ITSRELLVVPQILMNIHFDGVWM*VEPVEH
Trigger: ATGCTCCACGGGTTCCACTCACATCCACACACCATC...AAAATGAATGTTCATTAAAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR GCA 90 bp GGTCTCCTGGTTCTTGCTCTGGCAGTCTTCACCACCTCATGCTACCATTCAAATCTACTCCACTTTAATTaGCCTTGTAGTCCTACCATG +
Preference number: 2 (lower is better)
Translates to: GLLVLALAVFTTSCYHSNLLHFN*PCSPTM
Trigger: CATGGTAGGACTACAAGGGCAATTAAAGTGGAGTAG...ATTTGAATGGTAGCATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
3UTR-3UTR CCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAAGCTGGTGTCATTGGATaGCGTGACATGGTTTGCTCT +
Preference number: 2 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKAGVIG*RDMVCS
Trigger: AGAGCAAACCATGTCACGCCATCCAATGACACCAGC...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTTTTACCGAGTTCTCTTaGCATTCAGTCTCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: GEMVCGCEWNPWSMFASIFTEFS*HSVSEK
Trigger: TTTTTCAGAGACTGAATGCCAAGAGAACTCGGTAAA...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAAGCTCTAGAGGACTTCTaGACTCGCAGCTACAACTGT +
Preference number: 2 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKALEDF*TRSYNC
Trigger: ACAGTTGTAGCTGCGAGTCCAGAAGTCCTCTAGAGC...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAAGGAGAATACCTACATTaGTCCTTGTGGCTTGTCGGT +
Preference number: 2 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKGEYLH*SLWLVG
Trigger: ACCGACAAGCCACAAGGACCAATGTAGGTATTCTCC...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAAGTCTCACTGACTTCCTaGATCACCGAAAACCATCAG +
Preference number: 2 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKVSLTS*ITENHQ
Trigger: CTGATGGTTTTCGGTGATCCAGGAAGTCAGTGAGAC...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CCA 90 bp ATCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGATTTTAATGAACATTCATTTTCTACATTGGTCCTTGTaGCTTGTCGGTATTTCGTTT +
Preference number: 2 (lower is better)
Translates to: ITSRELLVVPQILMNIHFLHWSL*LVGISF
Trigger: AAACGAAATACCGACAAGCCACAAGGACCAATGTAG...AAAATGAATGTTCATTAAAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CCA 90 bp CTCCACTTTAATTGCCCTTGTAGTCCTACCATGCACCTTCCATATGCAACTAAAACTGCCATAGTGTTTTaGATAATCCAGTGGTTAAGG +
Preference number: 2 (lower is better)
Translates to: LHFNCPCSPTMHLPYATKTAIVF*IIQWLR
Trigger: CCTTAACCACTGGATTATCCAAAACACTATGGCAGT...TTTAGTTGCATATGGAAGGTGCATGGTAGGACTACAAGGGCAATTAAAGTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618129.1
3UTR-3UTR CCA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCTGTACTCATCAGAATaGGATACTCCACAACTGTCT +
Preference number: 2 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPLYSSE*DTPQLS
Trigger: AGACAGTTGTGGAGTATCCCATTCTGATGAGTACAG...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CAA 90 bp TATGAGATGCCACAGAATCTTTCTATGCTGGAACAAAGGTACCTTTaGTTTCCAGAAGGGTCAAAATGTTTGCTTGACAATCTTGGACTA +
Preference number: 2 (lower is better)
Translates to: YEMPQNLSMLEQRYL*FPEGSKCLLDNLGL
Trigger: TAGTCCAAGATTGTCAAGCAAACATTTTGACCCTTCTGGAAACAAAAGGTACCTTTGTTCCAGCATAGAAAGATTCTGTGGCATCTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CAA 90 bp AACTGTATAAATATAACAGTTCTTGATTATCTGCCTATAGACTTTTaGCTACTCCACTTTAATTGCCCTTGTAGTCCTACCATGCACCTT +
Preference number: 2 (lower is better)
Translates to: NCINITVLDYLPIDF*LLHFNCPCSPTMHL
Trigger: AAGGTGCATGGTAGGACTACAAGGGCAATTAAAGTGGAGTAGCAAAAAGTCTATAGGCAGATAATCAAGAACTGTTATATTTATACAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618129.1
3UTR CCA 72 bp ACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTaGGCTTGCCTCGGCAGAGTTCAGACGGAGTCACCG +
Preference number: 3 (lower is better)
Translates to: TAGCLGRWHVLG*ACLGRVQTESP
Trigger: CGGTGACTCCGTCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CAA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGAAATCTCTCCCCGGGCTaGCGAGCTTCCCCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: GASAAGTSLAGLASAEFRNLSPG*RASPPS
Trigger: GGAGGGAGGGGAAGCTCGCAAGCCCGGGGAGAGATT...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 72 bp AACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTaGCTGGGCTTGCCTCGGCAGAGTTCAGACGGAGTC +
Preference number: 3 (lower is better)
Translates to: NHSRVPRPLARP*LGLPRQSSDGV
Trigger: GACTCCGTCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 72 bp GCTATCAGGACAACCACAGCCGGGTGCCTCGGCCGCTaGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTT +
Preference number: 3 (lower is better)
Translates to: AIRTTTAGCLGR*HVLGWACLGRV
Trigger: AACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGTTGTCCTGATAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CAA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGAGGACGGAGTGGGCTCTaGTCTGCAGACAAGCGTGGT +
Preference number: 3 (lower is better)
Translates to: GASAAGTSLAGLASAEFRGRSGL*SADKRG
Trigger: ACCACGCTTGTCTGCAGACAAGAGCCCACTCCGTCC...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CAA 90 bp ACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGCGGCTTTATTTGCTaGAGTTTTAGCCAGAGGGGG +
Preference number: 3 (lower is better)
Translates to: TTAGCLGRWHVLGWACLGSGFIC*SFSQRG
Trigger: CCCCCTCTGGCTAAAACTCAAGCAAATAAAGCCGCT...GCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CAA 90 bp ACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCCATGTTTGCCTCCATTaGATGGTGCTTCTTGAACCT +
Preference number: 3 (lower is better)
Translates to: TTAGCLGRWHVLGWACLGHVCLH*MVLLEP
Trigger: AGGTTCAAGAAGCACCATCAAATGGAGGCAAACATG...GCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR GCA 72 bp GAAATACAGTATGTACACCGCATCCTTGGGCCGTGGTaGTTCAAGGCTGGCGCCACACCGTCCTGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: EIQYVHRILGPW*FKAGATPSWPC
Trigger: GCAGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR GCA 72 bp CAGATGAATAATGCTATCAGGACAACCACAGCCGGGTaGCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGC +
Preference number: 3 (lower is better)
Translates to: QMNNAIRTTTAG*LGRWHVLGWAC
Trigger: GCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGTTGTCCTGATAGCATTATTCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 72 bp GGCATGGTTAGGAAGCAGGCCCTGGAACGGACGGAGTaGGCTCTTGTCTGCAGACAAGCGTGGTCTAGCAGG +
Preference number: 3 (lower is better)
Translates to: GMVRKQALERTE*ALVCRQAWSSR
Trigger: CCTGCTAGACCACGCTTGTCTGCAGACAAGAGCCCACTCCGTCCGTTCCAGGGCCTGCTTCCTAACCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CAA 90 bp ACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCTTCTCACTTTCCCTCTaGTTTTCATTGGTTTGTCCA +
Preference number: 3 (lower is better)
Translates to: TTAGCLGRWHVLGWACLGFSLSL*FSLVCP
Trigger: TGGACAAACCAATGAAAACAAGAGGGAAAGTGAGAA...GCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR GCA 72 bp AAGCAGGCCCTGGAACGGACGGAGTGGGCTCTTGTCTaGAGACAAGCGTGGTCTAGCAGGTCAGGAAGAGAC +
Preference number: 3 (lower is better)
Translates to: KQALERTEWALV*RQAWSSRSGRD
Trigger: GTCTCTTCCTGACCTGCTAGACCACGCTTGTCTGCAGACAAGAGCCCACTCCGTCCGTTCCAGGGCCTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 72 bp CTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTaGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCC +
Preference number: 3 (lower is better)
Translates to: LEIQYVHRILGP*CFKAGATPSWP
Trigger: GGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 72 bp GAACGGACGGAGTGGGCTCTTGTCTGCAGACAAGCGTaGTCTAGCAGGTCAGGAAGAGACAGTGCCATCCCA +
Preference number: 3 (lower is better)
Translates to: ERTEWALVCRQA*SSRSGRDSAIP
Trigger: TGGGATGGCACTGTCTCTTCCTGACCTGCTAGACCACGCTTGTCTGCAGACAAGAGCCCACTCCGTCCGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CAA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTCGAAAACCATCAGGGTaGAAATTTCATCTGAGTCTT +
Preference number: 3 (lower is better)
Translates to: TASLGRGASRLAPHRPGPRKPSG*KFHLSL
Trigger: AAGACTCAGATGAAATTTCAACCCTGATGGTTTTCG...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 72 bp GGAGAATCTAGAAATACAGTATGTACACCGCATCCTTaGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTC +
Preference number: 3 (lower is better)
Translates to: GESRNTVCTPHP*AVVLQGWRHTV
Trigger: GACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CAA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACCCTGCCTGGGTGGGTTaGGTGCTGGGGTTGATTTGT +
Preference number: 3 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHPAWVG*VLGLIC
Trigger: ACAAATCAACCCCAGCACCAAACCCACCCAGGCAGG...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR TCA 72 bp TGGGAGAAGAAAATCAGGTCTCCGGAATCCACAGGATaGTCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGA +
Preference number: 3 (lower is better)
Translates to: WEKKIRSPESTG*SLQGSCSWCLR
Trigger: TCTGAGGCACCACGAGCAGCTCCCTTGAAGTGATCATCCTGTGGATTCCGGAGACCTGATTTTCTTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 72 bp CAGGACTTGAAGAGCACTTGGAAGGGACACCACACCTaGGTCTACAGCCTAAACACTCACTTCCCATGCACT +
Preference number: 3 (lower is better)
Translates to: QDLKSTWKGHHT*VYSLNTHFPCT
Trigger: AGTGCATGGGAAGTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAAGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CAA 90 bp TTTCTGTACTCATCAGAATGGGATACTCCACAACTGTCTCACCAACTCAGTGCCGATGACTCTGAAGCATaGGGCCTCCAGGACCACCCC +
Preference number: 3 (lower is better)
Translates to: FLYSSEWDTPQLSHQLSADDSEA*GLQDHP
Trigger: GGGGTGGTCCTGGAGGCCCAATGCTTCAGAGTCATC...GGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCTGATGAGTACAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR TCA 72 bp AATCCATATCATCTTCCAGCCTCAGTCGCTGAGCCTTaGAGATGGGGCGGGGAGAATACCTACATTGGTCCT +
Preference number: 3 (lower is better)
Translates to: NPYHLPASVAEP*RWGGENTYIGP
Trigger: AGGACCAATGTAGGTATTCTCCCCGCCCCATCTTCAAGGCTCAGCGACTGAGGCTGGAAGATGATATGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR TCA 72 bp GTGTTCCAATCCATATCATCTTCCAGCCTCAGTCGCTaGGCCTTGAAGATGGGGCGGGGAGAATACCTACAT +
Preference number: 3 (lower is better)
Translates to: VFQSISSSSLSR*ALKMGRGEYLH
Trigger: ATGTAGGTATTCTCCCCGCCCCATCTTCAAGGCTCAGCGACTGAGGCTGGAAGATGATATGGATTGGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR TCA 72 bp ATATCCTGGATGACTGTCTCCATGGCCAAGACCAGATaGATAATGCTATCAGGACAACCACAGCCGGGTGCC +
Preference number: 3 (lower is better)
Translates to: ISWMTVSMAKTR*IMLSGQPQPGA
Trigger: GGCACCCGGCTGTGGTTGTCCTGATAGCATTATTCATCTGGTCTTGGCCATGGAGACAGTCATCCAGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR GCA 72 bp CTAGAGGCCATCGAGGGAGGGCTGCTTCCTCTGAGATaGTTAATGACAGGAAGCGGCTTTATTTGCTTGAGT +
Preference number: 3 (lower is better)
Translates to: LEAIEGGLLPLR*LMTGSGFICLS
Trigger: ACTCAAGCAAATAAAGCCGCTTCCTGTCATTAAGCATCTCAGAGGAAGCAGCCCTCCCTCGATGGCCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR GCA 72 bp TCCACAACTGTCTCACCAACTCAGTGCCAGTACACATaGTCTAGAGGACTTCTGGACTCGCAGCTACAACTG +
Preference number: 3 (lower is better)
Translates to: STTVSPTQCQYT*SRGLLDSQLQL
Trigger: CAGTTGTAGCTGCGAGTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTGAGTTGGTGAGACAGTTGTGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CAA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGGAAGGCTGGGCCTGCTaGGTGGGTCCAAGATGCGCG +
Preference number: 3 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPEGWAC*VGPRCA
Trigger: CGCGCATCTTGGACCCACCAAGCAGGCCCAGCCTTC...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR GCA 72 bp AGAGGACTTCTGGACTCGCAGCTACAACTGTACAAGTaGACACAAGTGAATCTACCCTGTTATCCTCCACCC +
Preference number: 3 (lower is better)
Translates to: RGLLDSQLQLYK*TQVNLPCYPPP
Trigger: GGGTGGAGGATAACAGGGTAGATTCACTTGTGTGCACTTGTACAGTTGTAGCTGCGAGTCCAGAAGTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR GCA 72 bp AGAATGGGATACTCCACAACTGTCTCACCAACTCAGTaGCAGTACACATGCTCTAGAGGACTTCTGGACTCG +
Preference number: 3 (lower is better)
Translates to: RMGYSTTVSPTQ*QYTCSRGLLDS
Trigger: CGAGTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 72 bp CAACTCAGTGCCAGTACACATGCTCTAGAGGACTTCTaGACTCGCAGCTACAACTGTACAAGTGCACACAAG +
Preference number: 3 (lower is better)
Translates to: QLSASTHALEDF*TRSYNCTSAHK
Trigger: CTTGTGTGCACTTGTACAGTTGTAGCTGCGAGTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTGAGTTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 72 bp GCTGAAATAAAAGTCTCTCTAGTCAGTGGGGTGAGATaGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGT +
Preference number: 3 (lower is better)
Translates to: AEIKVSLVSGVR*CVDVSGTRGAC
Trigger: ACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACCCCACTGACTAGAGAGACTTTTATTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CCA 72 bp CTGGCATTAGCAACCCAGGTCTCCTGGTTCTTGCTCTaGCAGTCTTCACCACCTCATGCTACCATTCAAATT +
Preference number: 3 (lower is better)
Translates to: LALATQVSWFLL*QSSPPHATIQI
Trigger: AATTTGAATGGTAGCATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACCTGGGTTGCTAATGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
3UTR TCA 72 bp TGGACTCGCAGCTACAACTGTACAAGTGCACACAAGTaGATCTACCCTGTTATCCTCCACCCACTGATTGAG +
Preference number: 3 (lower is better)
Translates to: WTRSYNCTSAHK*IYPVILHPLIE
Trigger: CTCAATCAGTGGGTGGAGGATAACAGGGTAGATTCACTTGTGTGCACTTGTACAGTTGTAGCTGCGAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CAA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAAGGGAGAATACCTACATaGGTCCTTGTGGCTTGTCGG +
Preference number: 3 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKGRIPT*VLVACR
Trigger: CCGACAAGCCACAAGGACCAATGTAGGTATTCTCCC...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CAA 90 bp TTTCTGTACTCATCAGAATGGGATACTCCACAACTGTCTCACCAACTCAGTGCCCACCTTGAGGGCATTTaGGTCTTCAGTTCAACACTC +
Preference number: 3 (lower is better)
Translates to: FLYSSEWDTPQLSHQLSAHLEGI*VFSSTL
Trigger: GAGTGTTGAACTGAAGACCAAAATGCCCTCAAGGTG...GGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCTGATGAGTACAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR TCA 72 bp CATGAAAGGGCTCTGCATATAGAGAGATTGTCTCACTaGCTTCCTGGATCACCGAAAACCATCAGGGTTGAA +
Preference number: 3 (lower is better)
Translates to: HERALHIERLSH*LPGSPKTIRVE
Trigger: TTCAACCCTGATGGTTTTCGGTGATCCAGGAAGTCAGTGAGACAATCTCTCTATATGCAGAGCCCTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CAA 90 bp GGTCTCCTGGTTCTTGCTCTGGCAGTCTTCACCACCTCATGCTACCATTCAAATAGTACTATTAAGTTCTaGGTAGTCAAGGATGATGAC +
Preference number: 3 (lower is better)
Translates to: GLLVLALAVFTTSCYHSNSTIKF*VVKDDD
Trigger: GTCATCATCCTTGACTACCAAGAACTTAATAGTACT...ATTTGAATGGTAGCATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
3UTR-3UTR CAA 90 bp ATCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGATTTTAATGAACATTCATTTTTTCAGTTCAACACTCTaGCTCTGTTCCCAAATGGGG +
Preference number: 3 (lower is better)
Translates to: ITSRELLVVPQILMNIHFFSSTL*LCSQMG
Trigger: CCCCATTTGGGAACAGAGCAAGAGTGTTGAACTGAA...AAAATGAATGTTCATTAAAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR-3UTR CAA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTCCCTCTTGTTTTCATaGGTTTGTCCATACCATTCT +
Preference number: 3 (lower is better)
Translates to: LCTKENLEIQYVHRILGPSLLFS*VCPYHS
Trigger: AGAATGGTATGGACAAACCAATGAAAACAAGAGGGA...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR TCA 72 bp CAAGTGAATCTACCCTGTTATCCTCCACCCACTGATTaGGGATCGAATTGCACATTTCTCTTAACCATGACA +
Preference number: 3 (lower is better)
Translates to: QVNLPCYPPPTD*GSNCTFLLTMT
Trigger: TGTCATGGTTAAGAGAAATGTGCAATTCGATCCTCAATCAGTGGGTGGAGGATAACAGGGTAGATTCACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR TCA 72 bp CACACAAGTGAATCTACCCTGTTATCCTCCACCCACTaGTTGAGGATCGAATTGCACATTTCTCTTAACCAT +
Preference number: 3 (lower is better)
Translates to: HTSESTLLSSTH*LRIELHISLNH
Trigger: ATGGTTAAGAGAAATGTGCAATTCGATCCTCAATCAGTGGGTGGAGGATAACAGGGTAGATTCACTTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR GCA 72 bp TATCTGCCTATAGACTTTTTGCTACTCCACTTTAATTaGCCTTGTAGTCCTACCATGCACCTTCCATATGCA +
Preference number: 3 (lower is better)
Translates to: YLPIDFLLLHFN*PCSPTMHLPYA
Trigger: TGCATATGGAAGGTGCATGGTAGGACTACAAGGGCAATTAAAGTGGAGTAGCAAAAAGTCTATAGGCAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618129.1
3UTR-3UTR CAA 90 bp CTCCACTTTAATTGCCCTTGTAGTCCTACCATGCACCTTCCATATGCAACTAAATACTGCCATAGTGTTTaGGATAATCCAGTGGTTAAG +
Preference number: 3 (lower is better)
Translates to: LHFNCPCSPTMHLPYATKYCHSV*DNPVVK
Trigger: CTTAACCACTGGATTATCCAAAACACTATGGCAGTA...TTTAGTTGCATATGGAAGGTGCATGGTAGGACTACAAGGGCAATTAAAGTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
3UTR GCA 72 bp TGCTACTCCACTTTAATTGCCCTTGTAGTCCTACCATaGACCTTCCATATGCAACTAAAATTATATCATACA +
Preference number: 3 (lower is better)
Translates to: CYSTLIALVVLP*TFHMQLKLYHT
Trigger: TGTATGATATAATTTTAGTTGCATATGGAAGGTGCATGGTAGGACTACAAGGGCAATTAAAGTGGAGTAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR GCA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTAGTGTCCGCTTGGCTTaGCGCCCGCCGCCGCGGAGT +
Preference number: 4 (lower is better)
Translates to: TASLGRGASRLAPHRPGPSVRLA*RPPPRS
Trigger: ACTCCGCGGCGGCGGGCGGCAAGCCAAGCGGACACT...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGATGCAGTGGCCGTCCCTaGAGCCGCCGCAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GASAAGTSLAGLASAEFRCSGRP*SRRRSC
Trigger: GCAGGACCTGCGGCGGCTGCAGGGACGGCCACTGCA...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGAACAACCACAGCCGGGTaGCTCGGCCGCTGGCACGTC +
Preference number: 4 (lower is better)
Translates to: GASAAGTSLAGLASAEFRTTTAG*LGRWHV
Trigger: GACGTGCCAGCGGCCGAGGCACCCGGCTGTGGTTGT...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTGGGGGCTGTTGGGGTTaGAGGCATGGTGCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: TASLGRGASRLAPHRPGPGGCWG*RHGAEA
Trigger: GGCCTCCGCACCATGCCTCCAACCCCAACAGCCCCC...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGATGCAGCCGGGCTCGGTaGCCCACGGTCAGGTCGATG +
Preference number: 4 (lower is better)
Translates to: GASAAGTSLAGLASAEFRCSRAR*PTVRSM
Trigger: CATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCA...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGAATCTCTCCCCGGGCTTaGGAGCTTCCCCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GASAAGTSLAGLASAEFRISPRA*ELPLPP
Trigger: GGGAGGGAGGGGAAGCTCGCAAGCCCGGGGAGAGAT...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTCAGATGGAGAGACGGTaGTGGACGCCGACGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TASLGRGASRLAPHRPGPQMERR*WTPTGQ
Trigger: CTGGCCCGTCGGCGTCCACCACCGTCTCTCCATCTG...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp ACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCGGTTTTGGCACAGGCTaGATCACGCAGCCGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TTAGCLGRWHVLGWACLGGFGTG*ITQPVL
Trigger: CAAGACCGGCTGCGTGATCCAGCCTGTGCCAAAACC...GCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTGCTGGGCCTGCTTGGTaGGTCCAAGATGCGCGGGCT +
Preference number: 4 (lower is better)
Translates to: TASLGRGASRLAPHRPGPAGPAW*VQDARA
Trigger: AGCCCGCGCATCTTGGACCCACCAAGCAGGCCCAGC...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CAA 72 bp CGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTaGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATA +
Preference number: 4 (lower is better)
Translates to: RVPRPLARPWLG*PRQSSDGVTAI
Trigger: TATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CAA 72 bp CAACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTaGGCTGGGCTTGCCTCGGCAGAGTTCAGACGGAGT +
Preference number: 4 (lower is better)
Translates to: QPQPGASAAGTS*AGLASAEFRRS
Trigger: ACTCCGTCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGGGAGGCACCTCCTTTTaGGCGGCGGCTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VHRILGPWCFKAGATPSWGGTSF*AAAPGP
Trigger: AGGACCTGGAGCCGCCGCTCAAAAGGAGGTGCCTCC...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGAGGGGCGGCTTCTTCCTaGCTGGGTGGGTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GASAAGTSLAGLASAEFRGAASS*LGGFGA
Trigger: AGCACCAAACCCACCCAGGCAGGAAGAAGCCGCCCC...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGAGTCCTTGGCTGGGCTTaGCTCGGCAGAGTTCAGACG +
Preference number: 4 (lower is better)
Translates to: GASAAGTSLAGLASAEFRVLGWA*LGRVQT
Trigger: CGTCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGAC...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGAGAGAAGCAGAGATGGTaGCAGCAGGAAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GASAAGTSLAGLASAEFREKQRW*QQEGWA
Trigger: GGCCCAGCCTTCCTGCTGCCACCATCTCTGCTTCTC...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTGTTGGCAGTGTCAGATaGAGAGACGGTGGTGGACGC +
Preference number: 4 (lower is better)
Translates to: TASLGRGASRLAPHRPGPVGSVR*RDGGGR
Trigger: GCGTCCACCACCGTCTCTCCATCTGACACTGCCAAC...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGATGTCATTGGATGGCGTaGCATGGTTTGCTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: GASAAGTSLAGLASAEFRCHWMA*HGLLCA
Trigger: GGCGCAGAGCAAACCATGTCACGCCATCCAATGACA...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp ACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCTTATCCTCCACCCACTaGTTGAGGATCGAATTGCAC +
Preference number: 4 (lower is better)
Translates to: TTAGCLGRWHVLGWACLGLSSTH*LRIELH
Trigger: GTGCAATTCGATCCTCAATCAGTGGGTGGAGGATAA...GCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTGGCCATTTGGCATCATaGTCACTGGCGGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: TASLGRGASRLAPHRPGPGHLAS*SLAGRE
Trigger: TTCCCTTCCCGCCAGTGAGCATGATGCCAAATGGCC...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGTGTACACCGCATCCTTaGGCCGTGGTGCTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: VHRILGPWCFKAGATPSWCTPHP*AVVLQG
Trigger: GCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACA...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGATGGGCACACTGCCATaGTCCTTTGACCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VHRILGPWCFKAGATPSWMGTLP*SFDPAG
Trigger: ACCTGCAGGGTCAAAGGATCATGGCAGTGTGCCCAT...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTTTTGCACTGCAGAACTaGAGCCTTCTTTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: TASLGRGASRLAPHRPGPFALQN*SLLSPS
Trigger: GGACGGGGAAAGAAGGCTTCAGTTCTGCAGTGCAAA...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp ACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCACAAGTGCACACAAGTaGATCTACCCTGTTATCCTC +
Preference number: 4 (lower is better)
Translates to: TTAGCLGRWHVLGWACLGTSAHK*IYPVIL
Trigger: GAGGATAACAGGGTAGATTCACTTGTGTGCACTTGT...GCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp ACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCACAGCAGTAAGATCGTaGGAAGGAAGAGGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: TTAGCLGRWHVLGWACLGTAVRS*EGRGGK
Trigger: TTTTCCTCCTCTTCCTTCTCACGATCTTACTGCTGT...GCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTGAGGGTGTAATGTGCTaGACAGCCCAGCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: TASLGRGASRLAPHRPGPEGVMC*TAQLED
Trigger: ATCTTCCAGCTGGGCTGTGCAGCACATTACACCCTC...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGTGGGAGGGTGTAATGTaGTGCACAGCCCAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: VHRILGPWCFKAGATPSWWEGVM*CTAQLE
Trigger: TTCCAGCTGGGCTGTGCAGCACATTACACCCTCCCA...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTCCGTCCTGCGGGCCCTaGAGCACGCCTGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GEMVCGCEWNPWSMFASIPSCGP*STPGKP
Trigger: CGGCTTCCCAGGCGTGCTGCAGGGCCCGCAGGACGG...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGATGCTAGCAGGTGGCTaGACGGAGACAGGAGGGATA +
Preference number: 4 (lower is better)
Translates to: VHRILGPWCFKAGATPSWMLAGG*TETGGI
Trigger: TATCCCTCCTGTCTCCGTCCAGCCACCTGCTAGCAT...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGATGACTCTGAAGCATTaGGCCTCCAGGACCACCCCT +
Preference number: 4 (lower is better)
Translates to: VHRILGPWCFKAGATPSWMTLKH*ASRTTP
Trigger: AGGGGTGGTCCTGGAGGCCCAATGCTTCAGAGTCAT...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp ACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAAACAGAATCATGGGTaGTCTTTCTCACTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: TTAGCLGRWHVLGWACLGKQNHG*SFSLSL
Trigger: GAGGGAAAGTGAGAAAGATCACCCATGATTCTGTTT...GCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGGAGGAAAAGGGGTGCTaGTGGCTTATGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: VHRILGPWCFKAGATPSWEEKGC*WLMRCH
Trigger: GTGGCATCTCATAAGCCATCAGCACCCCTTTTCCTC...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGAAGAACAGAAATGTGCTaGCGGCTCTCCCCATCTGTA +
Preference number: 4 (lower is better)
Translates to: GASAAGTSLAGLASAEFRRTEMC*RLSPSV
Trigger: TACAGATGGGGAGAGCCGGCAGCACATTTCTGTTCT...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GTGTCATTGGATGGCGTGACATGGTTTGCTCTGCGCCCTCTCTCCATGAGCGTAGCCTTGACGTGCGCGTaGAGCGCGCGGTGGATCACG +
Preference number: 4 (lower is better)
Translates to: VSLDGVTWFALRPLSMSVALTCA*SARWIT
Trigger: CGTGATCCACCGCGCGCTGCACGCGCACGTCAAGGC...TACGCTCATGGAGAGAGGGCGCAGAGCAAACCATGTCACGCCATCCAATGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGAGTGTGTGGATGTGAGTaGAACCCGTGGAGCATGTTT +
Preference number: 4 (lower is better)
Translates to: GASAAGTSLAGLASAEFRVCGCE*NPWSMF
Trigger: AAACATGCTCCACGGGTTCCACTCACATCCACACAC...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp CTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATAAATATAACTCTGCACCACCACGGTCAGGTCGATaGCGCCGTCCTGCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LASAEFRRSHRHKYNSAPPRSGR*RRPAGP
Trigger: AGGGCCCGCAGGACGGCGTCATCGACCTGACCGTGG...TGGTGCAGAGTTATATTTATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp TGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTTGATGGTGCGTGCCGTTCACGATaGCGTTGCAGGCCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: WCVDVSGTRGACLPPFDGACRSR*RCRPRP
Trigger: CGGCCGCGGCCTGCAACGTCATCGTGAACGGCACGC...ACCATCAAATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGTTTGATGGTGCTTCTTaGACCTCAGGCCTGAACCCT +
Preference number: 4 (lower is better)
Translates to: VHRILGPWCFKAGATPSWFDGAS*TSGLNP
Trigger: AGGGTTCAGGCCTGAGGTTCAAGAAGCACCATCAAA...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp ACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCTTGATTGAGACATTTTaGACTGCAGAACTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: TTAGCLGRWHVLGWACLGLIETF*TAELKP
Trigger: AGGCTTCAGTTCTGCAGTGCAAAATGTCTCAATCAA...GCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTGCACCGGGCCGCGGTTaGTCATCACCATGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GEMVCGCEWNPWSMFASIAPGRG*SSPWEG
Trigger: GCCCTCCCATGGTGATGACCAACCGCGGCCCGGTGC...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTGCGTGCAGCGCGCGGTaGATCACGTTGTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GEMVCGCEWNPWSMFASIACSAR*ITLCSR
Trigger: CCGGCTGCACAACGTGATCCACCGCGCGCTGCACGC...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGGCTGGTGTCATTGGATaGCGTGACATGGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: VHRILGPWCFKAGATPSWAGVIG*RDMVCS
Trigger: AGAGCAAACCATGTCACGCCATCCAATGACACCAGC...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTTGATGGTGGCGCCACACCGTCCTaGCCCTGCCCACCCGCAACT +
Preference number: 4 (lower is better)
Translates to: WCVDVSGTRGACLPPFDGGATPS*PCPPAT
Trigger: AGTTGCGGGTGGGCAGGGCCAGGACGGTGTGGCGCC...ACCATCAAATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGATTCTCTCGGGCTCCATaGGAGAAGAAAATCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GASAAGTSLAGLASAEFRFSRAP*EKKIRS
Trigger: AGACCTGATTTTCTTCTCCCATGGAGCCCGAGAGAA...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp GCAACCCAGGTCTCCTGGTTCTTGCTCTGGCAGTCTTCACCACCTCATGCTACCTCCCTTTTCACTGGGTaGGCCGGCTTCCTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: ATQVSWFLLWQSSPPHATSLFTG*AGFLLR
Trigger: ACGGAGCAGGAAGCCGGCTCACCCAGTGAAAAGGGA...GGTAGCATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACCTGGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR CCA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACGACGGGCCAGGGCCCTaGCTTTGGCCAGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHDGPGP*LWPAVA
Trigger: GGCTACAGCTGGCCAAAGCCAGGGCCCTGGCCCGTC...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GTCTCACCAACTCAGTGCCAGTACACATGCTCTAGAGGACTTCTGGACTCGCAGGCATGGGGCTGGAAGTaGGGCCCAGGTTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VSPTQCQYTCSRGLLDSQAWGWK*GPGFWG
Trigger: GCCCCAGAAACCTGGGCCCCACTTCCAGCCCCATGC...CTGCGAGTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTGAGTTGGTGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTCGCATCCTTGGGCCGTaGTGCTTCAAGGCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: GEMVCGCEWNPWSMFASIRILGP*CFKAGA
Trigger: GGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCG...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GTGTCATTGGATGGCGTGACATGGTTTGCTCTGCGCCCTCTCTCCATGAGCGTACGGCTTCTTCCTGCCTaGGTGGGTTTGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VSLDGVTWFALRPLSMSVRLLPA*VGLVLG
Trigger: CCCCAGCACCAAACCCACCCAGGCAGGAAGAAGCCG...TACGCTCATGGAGAGAGGGCGCAGAGCAAACCATGTCACGCCATCCAATGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp CTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATAAATATAACTCTGCACCACCGCTGGCACGTCCTTaGCTGGGCTTGCCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: LASAEFRRSHRHKYNSAPPLARP*LGLPRQ
Trigger: CTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGG...TGGTGCAGAGTTATATTTATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GTGTCATTGGATGGCGTGACATGGTTTGCTCTGCGCCCTCTCTCCATGAGCGTAAAGGGCGGGCGGATCTaGTGCATGATCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VSLDGVTWFALRPLSMSVKGGRI*CMICCS
Trigger: GGAGCAGCAGATCATGCAGCAGATCCGCCCGCCCTT...TACGCTCATGGAGAGAGGGCGCAGAGCAAACCATGTCACGCCATCCAATGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACTGTGGGGCGATAGCATaGGCCGGTGCATGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHCGAIA*AGAWGW
Trigger: CCAGCCCCATGCACCGGCCCATGCTATCGCCCCACA...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GTCTCACCAACTCAGTGCCAGTACACATGCTCTAGAGGACTTCTGGACTCGCAGATGCGCGGGCTTCTCTaGGCTAGAGGCCATCGAGGG +
Preference number: 4 (lower is better)
Translates to: VSPTQCQYTCSRGLLDSQMRGLL*ARGHRG
Trigger: CCCTCGATGGCCTCTAGCCCAGAGAAGCCCGCGCAT...CTGCGAGTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTGAGTTGGTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTAAGGCTGGGCCTGCTTaGTGGGTCCAAGATGCGCGG +
Preference number: 4 (lower is better)
Translates to: GEMVCGCEWNPWSMFASIKAGPA*WVQDAR
Trigger: CCGCGCATCTTGGACCCACCAAGCAGGCCCAGCCTT...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
3UTR CAA 72 bp TTAGGAAGCAGGCCCTGGAACGGACGGAGTGGGCTCTaGTCTGCAGACAAGCGTGGTCTAGCAGGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LGSRPWNGRSGL*SADKRGLAGQE
Trigger: TTCCTGACCTGCTAGACCACGCTTGTCTGCAGACAAGAGCCCACTCCGTCCGTTCCAGGGCCTGCTTCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp GCAACCCAGGTCTCCTGGTTCTTGCTCTGGCAGTCTTCACCACCTCATGCTACCATGGGCACACTGCCATaGTCCTTTGACCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ATQVSWFLLWQSSPPHATMGTLP*SFDPAG
Trigger: ACCTGCAGGGTCAAAGGATCATGGCAGTGTGCCCAT...GGTAGCATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACCTGGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR TCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGAGCGTACCCTGTGAGTaGACGTTCCTTTTACTTATT +
Preference number: 4 (lower is better)
Translates to: VHRILGPWCFKAGATPSWSVPCE*TFLLLI
Trigger: AATAAGTAAAAGGAACGTTCACTCACAGGGTACGCT...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTGGCGGGCGGATCTGCTaGATGATCTGCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GEMVCGCEWNPWSMFASIGGRIC*MICCSM
Trigger: CATGGAGCAGCAGATCATGCAGCAGATCCGCCCGCC...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAACGGGCGGGGGCCCGATaGCGGGAAGCATGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKRAGAR*REAWGW
Trigger: CCAACCCCATGCTTCCCGGCATCGGGCCCCCGCCCG...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp AATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTCGGTGGATCACGTTGTaGAGCCGGGCTCGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: NLEIQYVHRILGPWCFKARWITL*SRARWP
Trigger: GGGCCACCGAGCCCGGCTGCACAACGTGATCCACCG...AGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAACTCGGTCCGTCCGCATaGGCGCGGGGAGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKLGPSA*ARGARA
Trigger: GGCCCTTGCTCCCCGCGCCCATGCGGACGGACCGAG...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp AATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTCCAGGGCCCTGGCTTTaGCCAGCTGTAGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: NLEIQYVHRILGPWCFKAPGPWL*PAVATG
Trigger: CCCGGTGGCTACAGCTGGCCAAAGCCAGGGCCCTGG...AGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTTGATGGTGCGAGTCCGCGGACTTaGACGAGCCCTGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: WCVDVSGTRGACLPPFDGASPRT*TSPAWS
Trigger: ACTCCAAGCAGGGCTCGTCCAAGTCCGCGGACTCGC...ACCATCAAATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGACCTTGAGGGCATTTTaGTCTTCAGTTCAACACTCT +
Preference number: 4 (lower is better)
Translates to: VHRILGPWCFKAGATPSWTLRAF*SSVQHS
Trigger: AGAGTGTTGAACTGAAGACCAAAATGCCCTCAAGGT...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GTCTCACCAACTCAGTGCCAGTACACATGCTCTAGAGGACTTCTGGACTCGCAGTGGCACGTCCTTGGCTaGGCTTGCCTCGGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: VSPTQCQYTCSRGLLDSQWHVLG*ACLGRV
Trigger: AACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCA...CTGCGAGTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTGAGTTGGTGAGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACGAGGGGGTGGTGAGCTaGCCAGCTGGTGTCATTGGA +
Preference number: 4 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHEGVVS*PAGVIG
Trigger: TCCAATGACACCAGCTGGTCAGCTCACCACCCCCTC...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTTGATGGTTCTGGAGTGAGCAGCTaGACCCCGGTGCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: WCVDVSGTRGACLPPFDGSGVSS*TPVPSA
Trigger: AGCAGAAGGCACCGGGGTGCAGCTGCTCACTCCAGA...ACCATCAAATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GTGTCATTGGATGGCGTGACATGGTTTGCTCTGCGCCCTCTCTCCATGAGCGTAGATCTCCCTTTTCACTaGGTGAGCCGGCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VSLDGVTWFALRPLSMSVDLPFH*VSRLPA
Trigger: AGCAGGAAGCCGGCTCACCCAGTGAAAAGGGAGATC...TACGCTCATGGAGAGAGGGCGCAGAGCAAACCATGTCACGCCATCCAATGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACTCACGCAGCCGGTCTTaGGCAGCATCCGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHSRSRS*AASAEH
Trigger: ATGCTCTGCGGATGCTGCCCAAGACCGGCTGCGTGA...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACGGGGAGAAGCAGAGATaGTGGCAGCAGGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHGEKQR*WQQEGW
Trigger: CCAGCCTTCCTGCTGCCACCATCTCTGCTTCTCCCC...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp CTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATAAATATAACTCTGCACCATTAGGAAGCAGGCCCTaGAACGGACGGAGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LASAEFRRSHRHKYNSAPLGSRP*NGRSGL
Trigger: GAGCCCACTCCGTCCGTTCCAGGGCCTGCTTCCTAA...TGGTGCAGAGTTATATTTATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAAGGGTGCCTCGGCCGCTaGCACGTCCTTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKGCLGR*HVLGWA
Trigger: AGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCC...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp GTGTCATTGGATGGCGTGACATGGTTTGCTCTGCGCCCTCTCTCCATGAGCGTATCAGGGAATAGCGCTTaGTTCCCACTTTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: VSLDGVTWFALRPLSMSVSGNSA*FPLSGT
Trigger: GGTGCCAGAAAGTGGGAATCAAGCGCTATTCCCTGA...TACGCTCATGGAGAGAGGGCGCAGAGCAAACCATGTCACGCCATCCAATGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCATTTTGTATTGATTaGGACATTTTGCACTGCAGA +
Preference number: 4 (lower is better)
Translates to: VHRILGPWCFKAGATPSWPFCID*DILHCR
Trigger: TCTGCAGTGCAAAATGTCTCAATCAATACAAAATGG...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp AATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTTCCAAGAGTCTGGAGTaGGCAGCTGCACCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: NLEIQYVHRILGPWCFKASKSLE*AAAPRC
Trigger: GCACCGGGGTGCAGCTGCTCACTCCAGACTCTTGGA...AGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGGCTCGCGCTCCGCCTTaGCGTGCGCGTGCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPARAPP*RARAAR
Trigger: GCGCGCTGCACGCGCACGTCAAGGCGGAGCGCGAGC...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp AATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGCATGGGCGAGGAGATaGTGCACGGTGCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: NLEIQYVHRILGPWCFKAAWARR*CTVPWQ
Trigger: CTGCCATGGCACCGTGCATCATCTCCTCGCCCATGC...AGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp AATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTAGCCAGAGGGGGTGGTaGGCTGACCAGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: NLEIQYVHRILGPWCFKASQRGW*ADQLVS
Trigger: TGACACCAGCTGGTCAGCTCACCACCCCCTCTGGCT...AGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp TGTTCCCAAATGGGGCGCTATTTAGGGGAATTTAAAGAGAAAGCTGAGAAGAATCGCCACCCCTCCTGCTaGGGCTCCGCGGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: CSQMGRYLGEFKEKAEKNRHPSC*GSAALW
Trigger: CCACAAGGCCGCGGAGCCTCAGCAGGAGGGGTGGCG...ATTCTTCTCAGCTTTCTCTTTAAATTCCCCTAAATAGCGCCCCATTTGGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GCAACCCAGGTCTCCTGGTTCTTGCTCTGGCAGTCTTCACCACCTCATGCTACCTTGAGAACAGAAATGTaGTGCCGGCTCTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: ATQVSWFLLWQSSPPHATLRTEM*CRLSPS
Trigger: AGATGGGGAGAGCCGGCAGCACATTTCTGTTCTCAA...GGTAGCATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACCTGGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR GCA 90 bp TTTCTGTACTCATCAGAATGGGATACTCCACAACTGTCTCACCAACTCAGTGCCGGGTTGGAGGCATGGTaGGGAGGCCCGCGGATGAAG +
Preference number: 4 (lower is better)
Translates to: FLYSSEWDTPQLSHQLSAGLEAW*GGPRMK
Trigger: CTTCATCCGCGGGCCTCCGCACCATGCCTCCAACCC...GGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCTGATGAGTACAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TCTCCGCCATCAAAACGTGAACAATATAGGTCCAAAACCGTACAATGCAAATCACGCTCCGCCTTGACGTaGGCGTGCAGCGCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SPPSKREQYRSKTVQCKSRSALT*ACSARW
Trigger: CCACCGCGCGCTGCACGCGCACGTCAAGGCGGAGCG...TGATTTGCATTGTACGGTTTTGGACCTATATTGTTCACGTTTTGATGGCGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAAACACCGTCCTGGCCCTaGCCACCCGCAACTCGCCAC +
Preference number: 4 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKTPSWP*PPATRH
Trigger: GTGGCGAGTTGCGGGTGGGCAGGGCCAGGACGGTGT...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp CTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATAAATATAACTCTGCACCAGGCGGAGGACGTCAGTaGCTGTCACGGGTAAGGATA +
Preference number: 4 (lower is better)
Translates to: LASAEFRRSHRHKYNSAPGGGRQ*LSRVRI
Trigger: TATCCTTACCCGTGACAGCCACTGACGTCCTCCGCC...TGGTGCAGAGTTATATTTATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp AATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTTCTGTGGAGATGAAATaGCTGCTGCCGCCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: NLEIQYVHRILGPWCFKASVEMK*LLPPPA
Trigger: CGCCGGCGGCGGCAGCAGCCATTTCATCTCCACAGA...AGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TCTCCGCCATCAAAACGTGAACAATATAGGTCCAAAACCGTACAATGCAAATCACAGGGAGTGTCCGCTTaGCTTGCCGCCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SPPSKREQYRSKTVQCKSQGVSA*LAARRR
Trigger: GCGGCGGCGGGCGGCAAGCCAAGCGGACACTCCCTG...TGATTTGCATTGTACGGTTTTGGACCTATATTGTTCACGTTTTGATGGCGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp ATCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGATTTTAATGAACATTCATTTTCATGCTCGGCGGGCGTaGGCGCCAGGCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ITSRELLVVPQILMNIHFHARRA*APGSGP
Trigger: AGGCCCTGAGCCTGGCGCCCACGCCCGCCGAGCATG...AAAATGAATGTTCATTAAAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TGTTCCCAAATGGGGCGCTATTTAGGGGAATTTAAAGAGAAAGCTGAGAAGAATGCCCTGCAGCACGCCTaGGAAGCCGAGCTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: CSQMGRYLGEFKEKAEKNALQHA*EAELAA
Trigger: GGCGGCCAGCTCGGCTTCCCAGGCGTGCTGCAGGGC...ATTCTTCTCAGCTTTCTCTTTAAATTCCCCTAAATAGCGCCCCATTTGGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GCAACCCAGGTCTCCTGGTTCTTGCTCTGGCAGTCTTCACCACCTCATGCTACCTCCTGGTTCTTGCTCTaGCAGTCTTCACCACCTCAT +
Preference number: 4 (lower is better)
Translates to: ATQVSWFLLWQSSPPHATSWFLL*QSSPPH
Trigger: ATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGA...GGTAGCATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACCTGGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR TCA 90 bp TGTTCCCAAATGGGGCGCTATTTAGGGGAATTTAAAGAGAAAGCTGAGAAGAATCGGTGGAGGTGGTGCTaGTGGTGGCGAGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: CSQMGRYLGEFKEKAEKNRWRWC*WWRGWR
Trigger: CCGCCAGCCTCGCCACCATCAGCACCACCTCCACCG...ATTCTTCTCAGCTTTCTCTTTAAATTCCCCTAAATAGCGCCCCATTTGGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTGCAGCTGCACCCCGGTaGCTTCTGCTTTATTTTCCA +
Preference number: 4 (lower is better)
Translates to: GEMVCGCEWNPWSMFASIAAAPR*LLLYFP
Trigger: TGGAAAATAAAGCAGAAGGCACCGGGGTGCAGCTGC...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp AATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGAGATGATGCACGGTaGCATGGCAGCCTTCTCCGC +
Preference number: 4 (lower is better)
Translates to: NLEIQYVHRILGPWCFKAGDDAR*HGSLLR
Trigger: GCGGAGAAGGCTGCCATGGCACCGTGCATCATCTCC...AGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACTGGCGTGACATGGTTTaGTCTGCGCCCTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHWRDMV*SAPSLH
Trigger: ATGGAGAGAGGGCGCAGAGCAAACCATGTCACGCCA...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGATCCTCGGGGCCCCGTaGAGTCGTCAGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: LCTKENLEIQYVHRILGPILGAP*SRQPSS
Trigger: GGAAGATGGCTGACGACTCCACGGGGCCCCGAGGAT...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGCCCGATGCTAGCAGGTaGCTGGACGGAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: LCTKENLEIQYVHRILGPPDASR*LDGDRR
Trigger: CCTCCTGTCTCCGTCCAGCCACCTGCTAGCATCGGG...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAATTGGGGTTGGAGGCATaGTGCGGAGGCCCGCGGATG +
Preference number: 4 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKLGLEA*CGGPRM
Trigger: CATCCGCGGGCCTCCGCACCATGCCTCCAACCCCAA...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGCGATGCCGGGAAGCATaGGGTTGGACAGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LCTKENLEIQYVHRILGPRCREA*GWTGGC
Trigger: ACAGCCCCCTGTCCAACCCCATGCTTCCCGGCATCG...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGAGAATCTTTCTATGCTaGAACAAAGGTACCTTTTGT +
Preference number: 4 (lower is better)
Translates to: VHRILGPWCFKAGATPSWRIFLC*NKGTFC
Trigger: ACAAAAGGTACCTTTGTTCCAGCATAGAAAGATTCT...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACTATTTGGAGTCTCGCTaGTGGGGATGGACTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHYLESR*WGWTWA
Trigger: TGCCCAAGTCCATCCCCATCAGCGAGACTCCAAATA...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp AATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTTCAGTCGCTGAGCCTTaGAGATGGGGCGGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: NLEIQYVHRILGPWCFKASVAEP*RWGGEN
Trigger: ATTCTCCCCGCCCCATCTTCAAGGCTCAGCGACTGA...AGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp GTGTCATTGGATGGCGTGACATGGTTTGCTCTGCGCCCTCTCTCCATGAGCGTAGAGAGATTGTCTCACTaGCTTCCTGGATCACCGAAA +
Preference number: 4 (lower is better)
Translates to: VSLDGVTWFALRPLSMSVERLSH*LPGSPK
Trigger: TTTCGGTGATCCAGGAAGTCAGTGAGACAATCTCTC...TACGCTCATGGAGAGAGGGCGCAGAGCAAACCATGTCACGCCATCCAATGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp CTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATAAATATAACTCTGCACCAACTGTGTGCTGTCAGTaGTGGGCATGGTTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LASAEFRRSHRHKYNSAPTVCCQ*WAWLGS
Trigger: GCTTCCTAACCATGCCCATCACTGACAGCACACAGT...TGGTGCAGAGTTATATTTATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGATCCTTGGGCCGTGGTaGTTCAAGGCTGGCGCCACA +
Preference number: 4 (lower is better)
Translates to: LCTKENLEIQYVHRILGPILGPW*FKAGAT
Trigger: TGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGAT...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTTGATGGTTTTAAAAAGCGAGCTTaGTCGCCAGGTGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: WCVDVSGTRGACLPPFDGFKKRA*SPGVSP
Trigger: GGGGGACACACCTGGCGAGCAAGCTCGCTTTTTAAA...ACCATCAAATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GTCTCACCAACTCAGTGCCAGTACACATGCTCTAGAGGACTTCTGGACTCGCAGGTCAGGAAGAGACAGTaGCATCCCAGTAGCTTACCA +
Preference number: 4 (lower is better)
Translates to: VSPTQCQYTCSRGLLDSQVRKRQ*HPSSLP
Trigger: TGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGAC...CTGCGAGTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTGAGTTGGTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp CTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATAAATATAACTCTGCACCAGCCCAGCTGGAAGATTaGCCTGGGTCTCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LASAEFRRSHRHKYNSAPAQLED*PGSLCR
Trigger: TCTACAAAGAGACCCAGGCCAATCTTCCAGCTGGGC...TGGTGCAGAGTTATATTTATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TGTTCCCAAATGGGGCGCTATTTAGGGGAATTTAAAGAGAAAGCTGAGAAGAATATGGAGAGACGGTGGTaGACGCCGACGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CSQMGRYLGEFKEKAEKNMERRW*TPTGQG
Trigger: GCCCTGGCCCGTCGGCGTCCACCACCGTCTCTCCAT...ATTCTTCTCAGCTTTCTCTTTAAATTCCCCTAAATAGCGCCCCATTTGGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAAGGTTGGTCATCACCATaGGAGGGCTCCGAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKGWSSP*EGSEAG
Trigger: TCCCGCCTCGGAGCCCTCCCATGGTGATGACCAACC...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAATGGACAGGGGGCTGTTaGGGTTGGAGGCATGGTGCG +
Preference number: 4 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKWTGGC*GWRHGA
Trigger: CGCACCATGCCTCCAACCCCAACAGCCCCCTGTCCA...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACGTCTGCAGACAAGCGTaGTCTAGCAGGTCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHVCRQA*SSRSGR
Trigger: TCTTCCTGACCTGCTAGACCACGCTTGTCTGCAGAC...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GTCTCACCAACTCAGTGCCAGTACACATGCTCTAGAGGACTTCTGGACTCGCAGTGTGAGTGGAACCCGTaGAGCATGTTTGCCTCCATT +
Preference number: 4 (lower is better)
Translates to: VSPTQCQYTCSRGLLDSQCEWNP*SMFASI
Trigger: AATGGAGGCAAACATGCTCCACGGGTTCCACTCACA...CTGCGAGTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTGAGTTGGTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp GCAACCCAGGTCTCCTGGTTCTTGCTCTGGCAGTCTTCACCACCTCATGCTACCGCTTATATTGTATGGTaGAATAACACTGTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: ATQVSWFLLWQSSPPHATAYIVW*NNTVLG
Trigger: CCCGAGGACAGTGTTATTTCACCATACAATATAAGC...GGTAGCATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACCTGGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR TCA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTTGGAGTCGCTGACGTaGGGGATAGGGATGGGGATG +
Preference number: 4 (lower is better)
Translates to: LCTKENLEIQYVHRILGPLESLT*GIGMGM
Trigger: CATCCCCATCCCTATCCCTCACGTCAGCGACTCCAA...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTCCTCCACCCACTGATTaGGGATCGAATTGCACATTT +
Preference number: 4 (lower is better)
Translates to: GEMVCGCEWNPWSMFASIPPPTD*GSNCTF
Trigger: AAATGTGCAATTCGATCCTCAATCAGTGGGTGGAGG...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTGTCTCACCAACTCAGTaGCAGTACACATGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: GEMVCGCEWNPWSMFASIVSPTQ*QYTCSR
Trigger: TCTAGAGCATGTGTACTGGCACTGAGTTGGTGAGAC...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GCAACCCAGGTCTCCTGGTTCTTGCTCTGGCAGTCTTCACCACCTCATGCTACCCTACTCCACTTTAATTaGCCTTGTAGTCCTACCATG +
Preference number: 4 (lower is better)
Translates to: ATQVSWFLLWQSSPPHATLLHFN*PCSPTM
Trigger: CATGGTAGGACTACAAGGGCAATTAAAGTGGAGTAG...GGTAGCATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACCTGGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR GCA 90 bp GGTCTCCTGGTTCTTGCTCTGGCAGTCTTCACCACCTCATGCTACCATTCAAATAGGTCTCCTGGTTCTTaGTCTGGCAGTCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: GLLVLALAVFTTSCYHSNRSPGS*SGSLHH
Trigger: GTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACCT...ATTTGAATGGTAGCATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR CCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAAGCTGCACAGCCCAGCTaGAAGATTGGCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKAAQPS*KIGLGL
Trigger: GAGACCCAGGCCAATCTTCCAGCTGGGCTGTGCAGC...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp CTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATAAATATAACTCTGCACCAGACAGGAGGGATATTTaGAGTCTCGCTGATGGGGAT +
Preference number: 4 (lower is better)
Translates to: LASAEFRRSHRHKYNSAPDRRDI*SLADGD
Trigger: ATCCCCATCAGCGAGACTCCAAATATCCCTCCTGTC...TGGTGCAGAGTTATATTTATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGCCGAAATTCATCATCTaGGGCACCGGCATCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LCTKENLEIQYVHRILGPPKFII*GTGIGP
Trigger: TGGCCCGATGCCGGTGCCCCAGATGATGAATTTCGG...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTTGATGGTGCTCTAGAGGACTTCTaGACTCGCAGCTACAACTGT +
Preference number: 4 (lower is better)
Translates to: WCVDVSGTRGACLPPFDGALEDF*TRSYNC
Trigger: ACAGTTGTAGCTGCGAGTCCAGAAGTCCTCTAGAGC...ACCATCAAATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TGTTCCCAAATGGGGCGCTATTTAGGGGAATTTAAAGAGAAAGCTGAGAAGAATGTGGTGCTTCAAGGCTaGCGCCACACCGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: CSQMGRYLGEFKEKAEKNVVLQG*RHTVLA
Trigger: GGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCAC...ATTCTTCTCAGCTTTCTCTTTAAATTCCCCTAAATAGCGCCCCATTTGGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTTGATGGTAAGGGACACCACACCTaGGTCTACAGCCTAAACACT +
Preference number: 4 (lower is better)
Translates to: WCVDVSGTRGACLPPFDGKGHHT*VYSLNT
Trigger: AGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTT...ACCATCAAATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GTGTCATTGGATGGCGTGACATGGTTTGCTCTGCGCCCTCTCTCCATGAGCGTAGCAAAATCAATATCCTaGATGACTGTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: VSLDGVTWFALRPLSMSVAKSIS*MTVSMA
Trigger: GGCCATGGAGACAGTCATCCAGGATATTGATTTTGC...TACGCTCATGGAGAGAGGGCGCAGAGCAAACCATGTCACGCCATCCAATGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp GTCTCACCAACTCAGTGCCAGTACACATGCTCTAGAGGACTTCTGGACTCGCAGGTTCGCAGTTATTCTTaGAGGCAAGCCTTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: VSPTQCQYTCSRGLLDSQVRSYS*RQALEF
Trigger: AAACTCCAAGGCTTGCCTTCAAGAATAACTGCGAAC...CTGCGAGTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTGAGTTGGTGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGCCGGAATCCACAGGATaGTCACTTCAAGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LCTKENLEIQYVHRILGPPESTG*SLQGSC
Trigger: GCAGCTCCCTTGAAGTGATCATCCTGTGGATTCCGG...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TTTCTGTACTCATCAGAATGGGATACTCCACAACTGTCTCACCAACTCAGTGCCGGTGAGCCGGCTTCCTaGTCCGTTTATTTTCGGGAG +
Preference number: 4 (lower is better)
Translates to: FLYSSEWDTPQLSHQLSAGEPAS*SVYFRE
Trigger: CTCCCGAAAATAAACGGAGCAGGAAGCCGGCTCACC...GGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCTGATGAGTACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACTCAGTTCAACACTCTTaGTCTGTTCCCAAATGGGGC +
Preference number: 4 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHSVQHS*SVPKWG
Trigger: GCCCCATTTGGGAACAGAGCAAGAGTGTTGAACTGA...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GTCTCACCAACTCAGTGCCAGTACACATGCTCTAGAGGACTTCTGGACTCGCAGCACATCATCTTCTGCTaGTGGCTTTATGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: VSPTQCQYTCSRGLLDSQHIIFC*WLYERW
Trigger: CCACCTTTCATAAAGCCACCAGCAGAAGATGATGTG...CTGCGAGTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTGAGTTGGTGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp AATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGATATTCCAAGAGTCTaGAGTGAGCAGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: NLEIQYVHRILGPWCFKADIPRV*SEQLHP
Trigger: GGGGTGCAGCTGCTCACTCCAGACTCTTGGAATATC...AGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TCTCCGCCATCAAAACGTGAACAATATAGGTCCAAAACCGTACAATGCAAATCACGCCCATCAGCTTTTTaGCCGCCTCCCCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SPPSKREQYRSKTVQCKSRPSAF*PPPRPG
Trigger: ACCTGGACGGGGAGGCGGCCAAAAAGCTGATGGGCG...TGATTTGCATTGTACGGTTTTGGACCTATATTGTTCACGTTTTGATGGCGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACGTCTCACTGACTTCCTaGATCACCGAAAACCATCAG +
Preference number: 4 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHVSLTS*ITENHQ
Trigger: CTGATGGTTTTCGGTGATCCAGGAAGTCAGTGAGAC...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp AATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGTCAGTGGGGTGAGATaGTGTGTGGATGTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: NLEIQYVHRILGPWCFKAVSGVR*CVDVSG
Trigger: TCCACTCACATCCACACACCATCTCACCCCACTGAC...AGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp ATCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGATTTTAATGAACATTCATTTTTCCCTTTTCACTGGGTaGGCCGGCTTCCTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: ITSRELLVVPQILMNIHFSLFTG*AGFLLR
Trigger: ACGGAGCAGGAAGCCGGCTCACCCAGTGAAAAGGGA...AAAATGAATGTTCATTAAAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TTTCTGTACTCATCAGAATGGGATACTCCACAACTGTCTCACCAACTCAGTGCCTGCTGCATGATCTGCTaGTCCATGAAGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FLYSSEWDTPQLSHQLSACCMIC*SMKMGS
Trigger: GCTGCCCATCTTCATGGAGCAGCAGATCATGCAGCA...GGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCTGATGAGTACAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTCTACAACTGTACAAGTaGACACAAGTGAATCTACCC +
Preference number: 4 (lower is better)
Translates to: GEMVCGCEWNPWSMFASILQLYK*TQVNLP
Trigger: GGGTAGATTCACTTGTGTGCACTTGTACAGTTGTAG...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp AATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTCAGTGCCAGTACACATaGTCTAGAGGACTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: NLEIQYVHRILGPWCFKAQCQYT*SRGLLD
Trigger: GTCCAGAAGTCCTCTAGAGCATGTGTACTGGCACTG...AGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GCAACCCAGGTCTCCTGGTTCTTGCTCTGGCAGTCTTCACCACCTCATGCTACCGTCTTCACCACCTCATaGTACCATTCAAATTATACA +
Preference number: 4 (lower is better)
Translates to: ATQVSWFLLWQSSPPHATVFTTS*YHSNYT
Trigger: TGTATAATTTGAATGGTAGCATGAGGTGGTGAAGAC...GGTAGCATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACCTGGGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR CCA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACCTTGAAGGCAAGCCTTaGAGTTTCCTTAGCATAGTG +
Preference number: 4 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHLEGKP*SFLSIV
Trigger: CACTATGCTAAGGAAACTCCAAGGCTTGCCTTCAAG...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TTTCTGTACTCATCAGAATGGGATACTCCACAACTGTCTCACCAACTCAGTGCCGATGGACTTGGGCACTaGCGTGGGGATTTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: FLYSSEWDTPQLSHQLSADGLGH*RGDFSD
Trigger: GTCACTAAAATCCCCACGCCAGTGCCCAAGTCCATC...GGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCTGATGAGTACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TGTTCCCAAATGGGGCGCTATTTAGGGGAATTTAAAGAGAAAGCTGAGAAGAATCGGCATCGGGCCATTTaGCATCATGCTCACTGGCGG +
Preference number: 4 (lower is better)
Translates to: CSQMGRYLGEFKEKAEKNRHRAI*HHAHWR
Trigger: CCGCCAGTGAGCATGATGCCAAATGGCCCGATGCCG...ATTCTTCTCAGCTTTCTCTTTAAATTCCCCTAAATAGCGCCCCATTTGGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAACTGCAGGTGAGTCACTaGGTCCATTTCCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKLQVSH*VHFQWQ
Trigger: TTGCCACTGGAAATGGACTCAGTGACTCACCTGCAG...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCAGGGGCGTTCGGAATaGAGTTCTCCCCGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPQGRSE*SSPRCW
Trigger: CCAGCAACGGGGAGAACTTCATTCCGAACGCCCCTG...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp CTCCACTTTAATTGCCCTTGTAGTCCTACCATGCACCTTCCATATGCAACTAAAGGTGAGCCGGCTTCCTaGTCCGTTTATTTTCGGGAG +
Preference number: 4 (lower is better)
Translates to: LHFNCPCSPTMHLPYATKGEPAS*SVYFRE
Trigger: CTCCCGAAAATAAACGGAGCAGGAAGCCGGCTCACC...TTTAGTTGCATATGGAAGGTGCATGGTAGGACTACAAGGGCAATTAAAGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR GCA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCAGGAAGGCTGGGCCTaGTTGGTGGGTCCAAGATGC +
Preference number: 4 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPQEGWA*LVGPRC
Trigger: GCATCTTGGACCCACCAAGCAGGCCCAGCCTTCCTG...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TCTCCGCCATCAAAACGTGAACAATATAGGTCCAAAACCGTACAATGCAAATCATGGCATCATGCTCACTaGCGGGAAGGGAAGACTCGG +
Preference number: 4 (lower is better)
Translates to: SPPSKREQYRSKTVQCKSWHHAH*REGKTR
Trigger: CCGAGTCTTCCCTTCCCGCCAGTGAGCATGATGCCA...TGATTTGCATTGTACGGTTTTGGACCTATATTGTTCACGTTTTGATGGCGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp ATCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGATTTTAATGAACATTCATTTTGCCTCCCCGTCCAGGTaGCAGTTGGAAGCACAGTTA +
Preference number: 4 (lower is better)
Translates to: ITSRELLVVPQILMNIHFASPSR*QLEAQL
Trigger: TAACTGTGCTTCCAACTGCCACCTGGACGGGGAGGC...AAAATGAATGTTCATTAAAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACCTGTACTCATCAGAATaGGATACTCCACAACTGTCT +
Preference number: 4 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHLYSSE*DTPQLS
Trigger: AGACAGTTGTGGAGTATCCCATTCTGATGAGTACAG...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGTGGTTTCTGTGGAGATaGAATGGCTGCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPWFLWR*NGCCRR
Trigger: GCGGCGGCAGCAGCCATTTCATCTCCACAGAAACCA...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAATTGAGAACAGAAATGTaGTGCCGGCTCTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKLRTEM*CRLSPS
Trigger: AGATGGGGAGAGCCGGCAGCACATTTCTGTTCTCAA...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TTTCTGTACTCATCAGAATGGGATACTCCACAACTGTCTCACCAACTCAGTGCCCAAAGCACTTCTCGCTaGAGAAGCTTTTCACCTCAC +
Preference number: 4 (lower is better)
Translates to: FLYSSEWDTPQLSHQLSAQSTSR*RSFSPH
Trigger: GTGAGGTGAAAAGCTTCTGCAGCGAGAAGTGCTTTG...GGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCTGATGAGTACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTAAGGGTCAAAATGTTTaGTTGACAATCTTGGACTAC +
Preference number: 4 (lower is better)
Translates to: GEMVCGCEWNPWSMFASIKGQNV*LTILDY
Trigger: GTAGTCCAAGATTGTCAAGCAAACATTTTGACCCTT...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCTTCTCCGCGGGTTTTaGCACAGGCTGGATCACGCA +
Preference number: 4 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPLLRGF*HRLDHA
Trigger: TGCGTGATCCAGCCTGTGCCAAAACCCGCGGAGAAG...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TCTCCGCCATCAAAACGTGAACAATATAGGTCCAAAACCGTACAATGCAAATCATTGGATGGCGTGACATaGTTTGCTCTGCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SPPSKREQYRSKTVQCKSLDGVT*FALRPL
Trigger: GAGAGGGCGCAGAGCAAACCATGTCACGCCATCCAA...TGATTTGCATTGTACGGTTTTGGACCTATATTGTTCACGTTTTGATGGCGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGGGAGAATACCTACATTaGTCCTTGTGGCTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: LCTKENLEIQYVHRILGPGEYLH*SLWLVG
Trigger: ACCGACAAGCCACAAGGACCAATGTAGGTATTCTCC...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TGTTCCCAAATGGGGCGCTATTTAGGGGAATTTAAAGAGAAAGCTGAGAAGAATCTGGAACGGACGGAGTaGGCTCTTGTCTGCAGACAA +
Preference number: 4 (lower is better)
Translates to: CSQMGRYLGEFKEKAEKNLERTE*ALVCRQ
Trigger: TTGTCTGCAGACAAGAGCCCACTCCGTCCGTTCCAG...ATTCTTCTCAGCTTTCTCTTTAAATTCCCCTAAATAGCGCCCCATTTGGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTCTTCATCTCCTCATTaGTCTCCCTTTTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: LCTKENLEIQYVHRILGPSSSPH*SPFSLG
Trigger: ACCCAGTGAAAAGGGAGATCAATGAGGAGATGAAGA...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAACATGAGCGTACCCTGTaGGTGAACGTTCCTTTTACT +
Preference number: 4 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKHERTL*VNVPFT
Trigger: AGTAAAAGGAACGTTCACTCACAGGGTACGCTCATG...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGGAGTGGGCTCTTGTCTaGAGACAAGCGTGGTCTAGC +
Preference number: 4 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPEWALV*RQAWSS
Trigger: GCTAGACCACGCTTGTCTGCAGACAAGAGCCCACTC...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACCACAGAATCTTTCTATaGTGGAACAAAGGTACCTTT +
Preference number: 4 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHHRIFL*WNKGTF
Trigger: AAAGGTACCTTTGTTCCAGCATAGAAAGATTCTGTG...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp CTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATAAATATAACTCTGCACCAAGTGAAACAGAATCATaGGTGATCTTTCTCACTTTC +
Preference number: 4 (lower is better)
Translates to: LASAEFRRSHRHKYNSAPSETES*VIFLTF
Trigger: GAAAGTGAGAAAGATCACCCATGATTCTGTTTCACT...TGGTGCAGAGTTATATTTATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp TCTCCGCCATCAAAACGTGAACAATATAGGTCCAAAACCGTACAATGCAAATCACACAGTTATTCTCCTTaGCCGACTCTAGCTCGCTCA +
Preference number: 4 (lower is better)
Translates to: SPPSKREQYRSKTVQCKSHSYSP*PTLARS
Trigger: TGAGCGAGCTAGAGTCGGTCAAGGAGAATAACTGTG...TGATTTGCATTGTACGGTTTTGGACCTATATTGTTCACGTTTTGATGGCGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp TGTTCCCAAATGGGGCGCTATTTAGGGGAATTTAAAGAGAAAGCTGAGAAGAATGCGGCTTTATTTGCTTaGGTTTTAGCCAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: CSQMGRYLGEFKEKAEKNAALFA*VLARGG
Trigger: ACCCCCTCTGGCTAAAACTCAAGCAAATAAAGCCGC...ATTCTTCTCAGCTTTCTCTTTAAATTCCCCTAAATAGCGCCCCATTTGGGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TTTCTGTACTCATCAGAATGGGATACTCCACAACTGTCTCACCAACTCAGTGCCCTGAACAGGTCGAGTTaGTTTTCTAGGCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FLYSSEWDTPQLSHQLSALNRSS*FSRLLF
Trigger: AAACAGAAGCCTAGAAAAGCAACTCGACCTGTTCAG...GGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCTGATGAGTACAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TCTCCGCCATCAAAACGTGAACAATATAGGTCCAAAACCGTACAATGCAAATCATCACTTCAAGGGAGCTaGTCGTGGTGCCTCAGATTT +
Preference number: 4 (lower is better)
Translates to: SPPSKREQYRSKTVQCKSSLQGS*SWCLRF
Trigger: AAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGA...TGATTTGCATTGTACGGTTTTGGACCTATATTGTTCACGTTTTGATGGCGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TGTTCCCAAATGGGGCGCTATTTAGGGGAATTTAAAGAGAAAGCTGAGAAGAATATCCCTAAGTTCCTCTaGGGAGAAGCAGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: CSQMGRYLGEFKEKAEKNIPKFL*GEAEMV
Trigger: CACCATCTCTGCTTCTCCCCAGAGGAACTTAGGGAT...ATTCTTCTCAGCTTTCTCTTTAAATTCCCCTAAATAGCGCCCCATTTGGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp ATCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGATTTTAATGAACATTCATTTTAGTCTCTCTAGTCAGTaGGGTGAGATGGTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: ITSRELLVVPQILMNIHFSLSSQ*GEMVCG
Trigger: TCCACACACCATCTCACCCCACTGACTAGAGAGACT...AAAATGAATGTTCATTAAAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp GCCAACAGTACTATTAAGTTCTTGGTAGTCAAGGATGATGACATACATCTGTATCTGCAGGTGAGTCACTaGGTCCATTTCCAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: ANSTIKFLVVKDDDIHLYLQVSH*VHFQWQ
Trigger: TTGCCACTGGAAATGGACTCAGTGACTCACCTGCAG...ATACAGATGTATGTCATCATCCTTGACTACCAAGAACTTAATAGTACTGTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR GCA 90 bp TTTCTGTACTCATCAGAATGGGATACTCCACAACTGTCTCACCAACTCAGTGCCATCCCAAGAGAATTGTaGATTCAGACAGCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: FLYSSEWDTPQLSHQLSAIPREL*IQTAVR
Trigger: TCTTACTGCTGTCTGAATGCACAATTCTCTTGGGAT...GGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCTGATGAGTACAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCGTCCAGGTGGCAGTTaGAAGCACAGTTATTCTCCT +
Preference number: 4 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPRPGGS*KHSYSP
Trigger: AGGAGAATAACTGTGCTTCCAACTGCCACCTGGACG...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp AATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTCCCTCTTGTTTTCATTaGTTTGTCCATACCATTCTA +
Preference number: 4 (lower is better)
Translates to: NLEIQYVHRILGPWCFKAPSCFH*FVHTIL
Trigger: TAGAATGGTATGGACAAACCAATGAAAACAAGAGGG...AGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp ATCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGATTTTAATGAACATTCATTTTAAAAAGATCAGGACTTaGAGAGCACTTGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: ITSRELLVVPQILMNIHFKKIRT*RALGRD
Trigger: GTCCCTTCCAAGTGCTCTTCAAGTCCTGATCTTTTT...AAAATGAATGTTCATTAAAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGGGTGCTGATGGCTTATaGGATGCCACAGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPGADGL*DATESF
Trigger: GAAAGATTCTGTGGCATCTCATAAGCCATCAGCACC...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGATTCATGGTGTTTTCTaGAAAGTTCTTCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: LCTKENLEIQYVHRILGPIHGVF*KVLHLL
Trigger: GAGGAGATGAAGAACTTTGCAGAAAACACCATGAAT...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp CTCCACTTTAATTGCCCTTGTAGTCCTACCATGCACCTTCCATATGCAACTAAACTCAGTTTTCTCATCTaGTGGTGGCTTTATGAAAGG +
Preference number: 4 (lower is better)
Translates to: LHFNCPCSPTMHLPYATKLSFLI*WWLYER
Trigger: CCTTTCATAAAGCCACCAGCAGATGAGAAAACTGAG...TTTAGTTGCATATGGAAGGTGCATGGTAGGACTACAAGGGCAATTAAAGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR GCA 90 bp CTCCACTTTAATTGCCCTTGTAGTCCTACCATGCACCTTCCATATGCAACTAAACTTGTAGTCCTACCATaGACCTTCCATATGCAACTA +
Preference number: 4 (lower is better)
Translates to: LHFNCPCSPTMHLPYATKLVVLP*TFHMQL
Trigger: TAGTTGCATATGGAAGGTGCATGGTAGGACTACAAG...TTTAGTTGCATATGGAAGGTGCATGGTAGGACTACAAGGGCAATTAAAGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR CCA 90 bp ATCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGATTTTAATGAACATTCATTTTCTGCTTTATTTTCCATaGGAGGGTGTAATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ITSRELLVVPQILMNIHFLLYFP*EGVMCC
Trigger: GCAGCACATTACACCCTCCCATGGAAAATAAAGCAG...AAAATGAATGTTCATTAAAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp TCTCCGCCATCAAAACGTGAACAATATAGGTCCAAAACCGTACAATGCAAATCAGCTTATATTGTATGGTaGAATAACACTGTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SPPSKREQYRSKTVQCKSAYIVW*NNTVLG
Trigger: CCCGAGGACAGTGTTATTTCACCATACAATATAAGC...TGATTTGCATTGTACGGTTTTGGACCTATATTGTTCACGTTTTGATGGCGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp TCTCCGCCATCAAAACGTGAACAATATAGGTCCAAAACCGTACAATGCAAATCAATGGCCAAGACCAGATaGATAATGCTATCAGGACAA +
Preference number: 4 (lower is better)
Translates to: SPPSKREQYRSKTVQCKSMAKTR*IMLSGQ
Trigger: TTGTCCTGATAGCATTATTCATCTGGTCTTGGCCAT...TGATTTGCATTGTACGGTTTTGGACCTATATTGTTCACGTTTTGATGGCGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGAATCAATATCCTGGATaGCTGTCTCCATGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPNQYPG*LSPWPR
Trigger: TCTTGGCCATGGAGACAGTCATCCAGGATATTGATT...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAATTTGTGTGTCTTATGTaGTTACACCAGTCACATACA +
Preference number: 4 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKFVCLM*LHQSHT
Trigger: TGTATGTGACTGGTGTAAGCACATAAGACACACAAA...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGATCATCTTCTGCTGGTaGCTTTATGAAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPIIFCW*LYERWW
Trigger: CCACCACCTTTCATAAAGCCACCAGCAGAAGATGAT...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp TCTCCGCCATCAAAACGTGAACAATATAGGTCCAAAACCGTACAATGCAAATCACTACATTGGTCCTTGTaGCTTGTCGGTATTTCGTTT +
Preference number: 4 (lower is better)
Translates to: SPPSKREQYRSKTVQCKSLHWSL*LVGISF
Trigger: AAACGAAATACCGACAAGCCACAAGGACCAATGTAG...TGATTTGCATTGTACGGTTTTGGACCTATATTGTTCACGTTTTGATGGCGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR TCA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGGGAGAAAGCAAACAGTaGAACAGAATCATGGGTGAT +
Preference number: 4 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPGESKQ*NRIMGD
Trigger: ATCACCCATGATTCTGTTTCACTGTTTGCTTTCTCC...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR GCA 90 bp CTCCACTTTAATTGCCCTTGTAGTCCTACCATGCACCTTCCATATGCAACTAAAATATTAAGTTTCAGGTaGCATTTCCCCTCAACTGTA +
Preference number: 4 (lower is better)
Translates to: LHFNCPCSPTMHLPYATKILSFR*HFPSTV
Trigger: TACAGTTGAGGGGAAATGGCACCTGAAACTTAATAT...TTTAGTTGCATATGGAAGGTGCATGGTAGGACTACAAGGGCAATTAAAGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR TCA 90 bp ATCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGATTTTAATGAACATTCATTTTTCCTTTTACTTATTCTaGTTTCTAATTCGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ITSRELLVVPQILMNIHFSFYLF*FLIRRH
Trigger: GTGCCTCCGAATTAGAAATCAGAATAAGTAAAAGGA...AAAATGAATGTTCATTAAAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GCCAACAGTACTATTAAGTTCTTGGTAGTCAAGGATGATGACATACATCTGTATAGTTTTCTCATCTGCTaGTGGCTTTATGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: ANSTIKFLVVKDDDIHLYSFLIC*WLYERW
Trigger: CCACCTTTCATAAAGCCACCAGCAGATGAGAAAACT...ATACAGATGTATGTCATCATCCTTGACTACCAAGAACTTAATAGTACTGTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR CCA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGTTTACCGAGTTCTCTTaGCATTCAGTCTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPFTEFS*HSVSEK
Trigger: TTTTTCAGAGACTGAATGCCAAGAGAACTCGGTAAA...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CCA 90 bp GCCAACAGTACTATTAAGTTCTTGGTAGTCAAGGATGATGACATACATCTGTATACTGCCATAGTGTTTTaGATAATCCAGTGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: ANSTIKFLVVKDDDIHLYTAIVF*IIQWLR
Trigger: CCTTAACCACTGGATTATCCAAAACACTATGGCAGT...ATACAGATGTATGTCATCATCCTTGACTACCAAGAACTTAATAGTACTGTTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR GCA 90 bp GCCAACAGTACTATTAAGTTCTTGGTAGTCAAGGATGATGACATACATCTGTATATTCATGGTGTTTTCTaGAAAGTTCTTCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: ANSTIKFLVVKDDDIHLYIHGVF*KVLHLL
Trigger: GAGGAGATGAAGAACTTTGCAGAAAACACCATGAAT...ATACAGATGTATGTCATCATCCTTGACTACCAAGAACTTAATAGTACTGTTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS CCA 90 bp CCGCTCCCGCCGCCGCCGCCGCCGGGCCGCATCCTCGGGGCCCCGTaGAGTCGTCAGCCATCTTCCGTCGCTCGGTCCGTCCGCATGGGC +
Preference number: 5 (lower is better)
Translates to: PLPPPPPPGRILGAP*SRQPSSVARSVRMG
Trigger: GCCCATGCGGACGGACCGAGCGACGGAAGATGGCTGACGACTCCACGGGGCCCCGAGGATGCGGCCCGGCGGCGGCGGCGGCGGGAGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000477448.1
CDS GCA 90 bp TGCAGCCGGGCTCGGTGGCCCACGGTCAGGTCGATGACGCCGTCCTaGGGGCCCTGCAGCACGCCTGGGAAGCCGAGCTGGCCGCCCGCG +
Preference number: 5 (lower is better)
Translates to: CSRARWPTVRSMTPS*GPCSTPGKPSWPPA
Trigger: CGCGGGCGGCCAGCTCGGCTTCCCAGGCGTGCTGCAGGGCCCGCAGGACGGCGTCATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 90 bp CTGCGCTCCGCGGCGCTCGGCTCGCGCTCCGCCTTGACGTGCGCGTaGAGCGCGCGGTGGATCACGTTGTGCAGCCGGGCTCGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: LRSAALGSRSALTCA*SARWITLCSRARWP
Trigger: GGGCCACCGAGCCCGGCTGCACAACGTGATCCACCGCGCGCTGCACGCGCACGTCAAGGCGGAGCGCGAGCCGAGCGCCGCGGAGCGCAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 90 bp ACTCTAGCTCGCTCACCGCCGGTTCCTCAGGCGACAGCAGCTTCTTaGGGGGCGCGGGCGGCGGCGGCGGCGGCGGCTGCTCGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: TLARSPPVPQATAAS*GARAAAAAAAAREA
Trigger: CGCCTCCCGAGCAGCCGCCGCCGCCGCCGCCGCCCGCGCCCCCCAAGAAGCTGCTGTCGCCTGAGGAACCGGCGGTGAGCGAGCTAGAGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000494935.1
CDS GCA 90 bp CAGGTCCTGCGCTCCGCGGCGCTCGGCTCGCGCTCCGCCTTGACGTaGGCGTGCAGCGCGCGGTGGATCACGTTGTGCAGCCGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: QVLRSAALGSRSALT*ACSARWITLCSRAR
Trigger: CCGAGCCCGGCTGCACAACGTGATCCACCGCGCGCTGCACGCGCACGTCAAGGCGGAGCGCGAGCCGAGCGCCGCGGAGCGCAGGACCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 90 bp GCGCTCGGCTCGCGCTCCGCCTTGACGTGCGCGTGCAGCGCGCGGTaGATCACGTTGTGCAGCCGGGCTCGGTGGCCCACGGTCAGGTCG +
Preference number: 5 (lower is better)
Translates to: ALGSRSALTCACSAR*ITLCSRARWPTVRS
Trigger: CGACCTGACCGTGGGCCACCGAGCCCGGCTGCACAACGTGATCCACCGCGCGCTGCACGCGCACGTCAAGGCGGAGCGCGAGCCGAGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 90 bp TGCGCGTGCAGCGCGCGGTGGATCACGTTGTGCAGCCGGGCTCGGTaGCCCACGGTCAGGTCGATGACGCCGTCCTGCGGGCCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CACSARWITLCSRAR*PTVRSMTPSCGPCS
Trigger: GCTGCAGGGCCCGCAGGACGGCGTCATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCACAACGTGATCCACCGCGCGCTGCACGCGCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp ACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCGCCAGGGCCCTGGCTTaGGCCAGCTGTAGCCACCGG +
Preference number: 5 (lower is better)
Translates to: TTAGCLGRWHVLGWACLGARALA*ASCSHR
Trigger: CCGGTGGCTACAGCTGGCCAAAGCCAGGGCCCTGGC...GCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 90 bp CGCTCCGCCTTGACGTGCGCGTGCAGCGCGCGGTGGATCACGTTGTaGAGCCGGGCTCGGTGGCCCACGGTCAGGTCGATGACGCCGTCC +
Preference number: 5 (lower is better)
Translates to: RSALTCACSARWITL*SRARWPTVRSMTPS
Trigger: GGACGGCGTCATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCACAACGTGATCCACCGCGCGCTGCACGCGCACGTCAAGGCGGAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS TCA 90 bp GGATCACGTTGTGCAGCCGGGCTCGGTGGCCCACGGTCAGGTCGATaGCGCCGTCCTGCGGGCCCTGCAGCACGCCTGGGAAGCCGAGCT +
Preference number: 5 (lower is better)
Translates to: GSRCAAGLGGPRSGR*RRPAGPAARLGSRA
Trigger: AGCTCGGCTTCCCAGGCGTGCTGCAGGGCCCGCAGGACGGCGTCATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCACAACGTGATCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 90 bp GATGGAGAGACGGTGGTGGACGCCGACGGGCCAGGGCCCTGGCTTTaGCCAGCTGTAGCCACCGGGGAGGGGGCCTTCCTCCGAGCATCT +
Preference number: 5 (lower is better)
Translates to: DGETVVDADGPGPWL*PAVATGEGAFLRAS
Trigger: AGATGCTCGGAGGAAGGCCCCCTCCCCGGTGGCTACAGCTGGCCAAAGCCAGGGCCCTGGCCCGTCGGCGTCCACCACCGTCTCTCCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 90 bp GTGTCAGATGGAGAGACGGTGGTGGACGCCGACGGGCCAGGGCCCTaGCTTTGGCCAGCTGTAGCCACCGGGGAGGGGGCCTTCCTCCGA +
Preference number: 5 (lower is better)
Translates to: VSDGETVVDADGPGP*LWPAVATGEGAFLR
Trigger: TCGGAGGAAGGCCCCCTCCCCGGTGGCTACAGCTGGCCAAAGCCAGGGCCCTGGCCCGTCGGCGTCCACCACCGTCTCTCCATCTGACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 90 bp GAGGCATGGTGCGGAGGCCCGCGGATGAAGGGCGGGCGGATCTGCTaGATGATCTGCTGCTCCATGAAGATGGGCAGCGGCACCGGGCCG +
Preference number: 5 (lower is better)
Translates to: EAWCGGPRMKGGRIC*MICCSMKMGSGTGP
Trigger: CGGCCCGGTGCCGCTGCCCATCTTCATGGAGCAGCAGATCATGCAGCAGATCCGCCCGCCCTTCATCCGCGGGCCTCCGCACCATGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGACGGAGGCACCTCCTTTaGAGCGGCGGCTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GASAAGTSLAGLASAEFRRRHLL*SGGSRS
Trigger: GGACCTGGAGCCGCCGCTCAAAAGGAGGTGCCTCCG...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 90 bp GGAGGCCCGCGGATGAAGGGCGGGCGGATCTGCTGCATGATCTGCTaGTCCATGAAGATGGGCAGCGGCACCGGGCCGCGGTTGGTCATC +
Preference number: 5 (lower is better)
Translates to: GGPRMKGGRICCMIC*SMKMGSGTGPRLVI
Trigger: GATGACCAACCGCGGCCCGGTGCCGCTGCCCATCTTCATGGAGCAGCAGATCATGCAGCAGATCCGCCCGCCCTTCATCCGCGGGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTTCGCCCATCAGCTTTTaGGCCGCCTCCCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: TASLGRGASRLAPHRPGPSPISF*AASPSR
Trigger: CCTGGACGGGGAGGCGGCCAAAAAGCTGATGGGCGA...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTGAAGGCTGGGCCTGCTaGGTGGGTCCAAGATGCGCG +
Preference number: 5 (lower is better)
Translates to: TASLGRGASRLAPHRPGPEGWAC*VGPRCA
Trigger: CGCGCATCTTGGACCCACCAAGCAGGCCCAGCCTTC...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 90 bp TTGGAGGCATGGTGCGGAGGCCCGCGGATGAAGGGCGGGCGGATCTaGTGCATGATCTGCTGCTCCATGAAGATGGGCAGCGGCACCGGG +
Preference number: 5 (lower is better)
Translates to: LEAWCGGPRMKGGRI*CMICCSMKMGSGTG
Trigger: CCCGGTGCCGCTGCCCATCTTCATGGAGCAGCAGATCATGCAGCAGATCCGCCCGCCCTTCATCCGCGGGCCTCCGCACCATGCCTCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 90 bp GGCGGCACCAGCGGGGCAAGCGACGGCAGCCCGAAATTCATCATCTaGGGCACCGGCATCGGGCCATTTGGCATCATGCTCACTGGCGGG +
Preference number: 5 (lower is better)
Translates to: GGTSGASDGSPKFII*GTGIGPFGIMLTGG
Trigger: CCCGCCAGTGAGCATGATGCCAAATGGCCCGATGCCGGTGCCCCAGATGATGAATTTCGGGCTGCCGTCGCTTGCCCCGCTGGTGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 90 bp CAGGCGCCGAGAAGCGGGGTCTCTTCTAGCGGCGGAGGACGTCAGTaGCTGTCACGGGTAAGGATAGTGCGGAGAGTCTCGGGGATGCCG +
Preference number: 5 (lower is better)
Translates to: QAPRSGVSSSGGGRQ*LSRVRIVRRVSGMP
Trigger: CGGCATCCCCGAGACTCTCCGCACTATCCTTACCCGTGACAGCCACTGACGTCCTCCGCCGCTAGAAGAGACCCCGCTTCTCGGCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000477448.1
CDS CCA 90 bp AGGGCTCCGAGGCGGGACGCCAAGGGGAGGCCCGATGCTAGCAGGTaGCTGGACGGAGACAGGAGGGATATTTGGAGTCTCGCTGATGGG +
Preference number: 5 (lower is better)
Translates to: RAPRRDAKGRPDASR*LDGDRRDIWSLADG
Trigger: CCCATCAGCGAGACTCCAAATATCCCTCCTGTCTCCGTCCAGCCACCTGCTAGCATCGGGCCTCCCCTTGGCGTCCCGCCTCGGAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 90 bp CCTTCTCCGCGGGTTTTGGCACAGGCTGGATCACGCAGCCGGTCTTaGGCAGCATCCGCAGAGCATAGGCATGGTCCTCGTCCGCGGGGT +
Preference number: 5 (lower is better)
Translates to: PSPRVLAQAGSRSRS*AASAEHRHGPRPRG
Trigger: ACCCCGCGGACGAGGACCATGCCTATGCTCTGCGGATGCTGCCCAAGACCGGCTGCGTGATCCAGCCTGTGCCAAAACCCGCGGAGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000494935.1
CDS GCA 90 bp CGAAATTCATCATCTGGGGCACCGGCATCGGGCCATTTGGCATCATaGTCACTGGCGGGAAGGGAAGACTCGGCAGCGGGGCGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: RNSSSGAPASGHLAS*SLAGREDSAAGRPE
Trigger: CTCCGGGCGCCCCGCTGCCGAGTCTTCCCTTCCCGCCAGTGAGCATGATGCCAAATGGCCCGATGCCGGTGCCCCAGATGATGAATTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 90 bp CTCCGAGGCGGGACGCCAAGGGGAGGCCCGATGCTAGCAGGTGGCTaGACGGAGACAGGAGGGATATTTGGAGTCTCGCTGATGGGGATG +
Preference number: 5 (lower is better)
Translates to: LRGGTPRGGPMLAGG*TETGGIFGVSLMGM
Trigger: CATCCCCATCAGCGAGACTCCAAATATCCCTCCTGTCTCCGTCCAGCCACCTGCTAGCATCGGGCCTCCCCTTGGCGTCCCGCCTCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 90 bp CGGCAGCCCGAAATTCATCATCTGGGGCACCGGCATCGGGCCATTTaGCATCATGCTCACTGGCGGGAAGGGAAGACTCGGCAGCGGGGC +
Preference number: 5 (lower is better)
Translates to: RQPEIHHLGHRHRAI*HHAHWREGKTRQRG
Trigger: GCCCCGCTGCCGAGTCTTCCCTTCCCGCCAGTGAGCATGATGCCAAATGGCCCGATGCCGGTGCCCCAGATGATGAATTTCGGGCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 90 bp CGAGGAGATGATGCACGGTGCCATGGCAGCCTTCTCCGCGGGTTTTaGCACAGGCTGGATCACGCAGCCGGTCTTGGGCAGCATCCGCAG +
Preference number: 5 (lower is better)
Translates to: RGDDARCHGSLLRGF*HRLDHAAGLGQHPQ
Trigger: CTGCGGATGCTGCCCAAGACCGGCTGCGTGATCCAGCCTGTGCCAAAACCCGCGGAGAAGGCTGCCATGGCACCGTGCATCATCTCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000494935.1
CDS CCA 90 bp TCCATTTCTGCCATGTTTTTGTGTCTGGTTTCTGTGGAGATGAAATaGCTGCTGCCGCCGCCGGCGGTGGTGGTGGCGGCGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: SISAMFLCLVSVEMK*LLPPPAVVVAAAAA
Trigger: CGCCGCCGCCGCCGCCACCACCACCGCCGGCGGCGGCAGCAGCCATTTCATCTCCACAGAAACCAGACACAAAAACATGGCAGAAATGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000477448.1
CDS-3UTR CAA 90 bp ACCACAGCCGGGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCCACCTTGAGGGCATTTaGGTCTTCAGTTCAACACTC +
Preference number: 5 (lower is better)
Translates to: TTAGCLGRWHVLGWACLGHLEGI*VFSSTL
Trigger: GAGTGTTGAACTGAAGACCAAAATGCCCTCAAGGTG...GCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACCCGGCTGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGATGTACACCGCATCCTaGGGCCGTGGTGCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: VHRILGPWCFKAGATPSWMYTAS*GRGASR
Trigger: CCTTGAAGCACCACGGCCCAAGGATGCGGTGTACAT...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS TCA 90 bp CCGCCTCCCCGTCCAGGTGGCAGTTGGAAGCACAGTTATTCTCCTTaGCCGACTCTAGCTCGCTCACCGCCGGTTCCTCAGGCGACAGCA +
Preference number: 5 (lower is better)
Translates to: PPPRPGGSWKHSYSP*PTLARSPPVPQATA
Trigger: TGCTGTCGCCTGAGGAACCGGCGGTGAGCGAGCTAGAGTCGGTCAAGGAGAATAACTGTGCTTCCAACTGCCACCTGGACGGGGAGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000494935.1
CDS CCA 90 bp CACTGGCGTGGGGATTTTAGTGACAGAGCAGTTGGCAGTGTCAGATaGAGAGACGGTGGTGGACGCCGACGGGCCAGGGCCCTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: HWRGDFSDRAVGSVR*RDGGGRRRARALAL
Trigger: CAAAGCCAGGGCCCTGGCCCGTCGGCGTCCACCACCGTCTCTCCATCTGACACTGCCAACTGCTCTGTCACTAAAATCCCCACGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACGAGTGTCCGCTTGGCTaGCCGCCCGCCGCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHECPLG*PPAAAE
Trigger: CTCCGCGGCGGCGGGCGGCAAGCCAAGCGGACACTC...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGAGCACAGTTATTCTCCTaGACCGACTCTAGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: GASAAGTSLAGLASAEFRAQLFS*TDSSSL
Trigger: GAGCGAGCTAGAGTCGGTCAAGGAGAATAACTGTGC...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTGGGAGAATACCTACATaGGTCCTTGTGGCTTGTCGG +
Preference number: 5 (lower is better)
Translates to: TASLGRGASRLAPHRPGPGRIPT*VLVACR
Trigger: CCGACAAGCCACAAGGACCAATGTAGGTATTCTCCC...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 90 bp AGGCCCGATGCTAGCAGGTGGCTGGACGGAGACAGGAGGGATATTTaGAGTCTCGCTGATGGGGATGGACTTGGGCACTGGCGTGGGGAT +
Preference number: 5 (lower is better)
Translates to: RPDASRWLDGDRRDI*SLADGDGLGHWRGD
Trigger: ATCCCCACGCCAGTGCCCAAGTCCATCCCCATCAGCGAGACTCCAAATATCCCTCCTGTCTCCGTCCAGCCACCTGCTAGCATCGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTTTAGTGACAGAGCAGTaGGCAGTGTCAGATGGAGAG +
Preference number: 5 (lower is better)
Translates to: TASLGRGASRLAPHRPGPLVTEQ*AVSDGE
Trigger: CTCTCCATCTGACACTGCCAACTGCTCTGTCACTAA...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp GGTGCCTCGGCCGCTGGCACGTCCTTGGCTGGGCTTGCCTCGGCAGAGTTCAGAAGCGGCTTTATTTGCTaGAGTTTTAGCCAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: GASAAGTSLAGLASAEFRSGFIC*SFSQRG
Trigger: CCCCCTCTGGCTAAAACTCAAGCAAATAAAGCCGCT...TCTGAACTCTGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGCCGAGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 90 bp AGGGCCTCCTCGCCCATCAGCTTTTTGGCCGCCTCCCCGTCCAGGTaGCAGTTGGAAGCACAGTTATTCTCCTTGACCGACTCTAGCTCG +
Preference number: 5 (lower is better)
Translates to: RASSPISFLAASPSR*QLEAQLFSLTDSSS
Trigger: CGAGCTAGAGTCGGTCAAGGAGAATAACTGTGCTTCCAACTGCCACCTGGACGGGGAGGCGGCCAAAAAGCTGATGGGCGAGGAGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000494935.1
CDS-3UTR CAA 90 bp TGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTTGATGGTAATCTCTCCCCGGGCTaGCGAGCTTCCCCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: WCVDVSGTRGACLPPFDGNLSPG*RASPPS
Trigger: GGAGGGAGGGGAAGCTCGCAAGCCCGGGGAGAGATT...ACCATCAAATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp CTTGCCTCGGCAGAGTTCAGACGGAGTCACCGCCATAAATATAACTCTGCACCACCTTCTCCGCGGGTTTaGGCACAGGCTGGATCACGC +
Preference number: 5 (lower is better)
Translates to: LASAEFRRSHRHKYNSAPPSPRV*AQAGSR
Trigger: GCGTGATCCAGCCTGTGCCAAAACCCGCGGAGAAGG...TGGTGCAGAGTTATATTTATGGCGGTGACTCCGTCTGAACTCTGCCGAGGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp ACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGCCCTGAAGGGTCAAAATGTTaGCTTGACAATCTTGGACTA +
Preference number: 5 (lower is better)
Translates to: TASLGRGASRLAPHRPGPEGSKC*LDNLGL
Trigger: TAGTCCAAGATTGTCAAGCAAACATTTTGACCCTTC...AGGGCCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp TCTCCGCCATCAAAACGTGAACAATATAGGTCCAAAACCGTACAATGCAAATCAGGCTCGCGCTCCGCCTaGACGTGCGCGTGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: SPPSKREQYRSKTVQCKSGSRSA*TCACSA
Trigger: CGCGCTGCACGCGCACGTCAAGGCGGAGCGCGAGCC...TGATTTGCATTGTACGGTTTTGGACCTATATTGTTCACGTTTTGATGGCGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp GTACACCGCATCCTTGGGCCGTGGTGCTTCAAGGCTGGCGCCACACCGTCCTGGTCCCTCTTGTTTTCATaGGTTTGTCCATACCATTCT +
Preference number: 5 (lower is better)
Translates to: VHRILGPWCFKAGATPSWSLLFS*VCPYHS
Trigger: AGAATGGTATGGACAAACCAATGAAAACAAGAGGGA...CCAGGACGGTGTGGCGCCAGCCTTGAAGCACCACGGCCCAAGGATGCGGTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAAGCCGCTGGCACGTCCTaGGCTGGGCTTGCCTCGGCA +
Preference number: 5 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKAAGTS*AGLASA
Trigger: TGCCGAGGCAAGCCCAGCCAAGGACGTGCCAGCGGC...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS TCA 90 bp CCTTCCTCCGAGCATCTGTTAGCGGGATATTCCAAGAGTCTGGAGTaGGCAGCTGCACCCCGGTGCCTTCTGCTTTATTTTCCATGGGAG +
Preference number: 5 (lower is better)
Translates to: PSSEHLLAGYSKSLE*AAAPRCLLLYFPWE
Trigger: CTCCCATGGAAAATAAAGCAGAAGGCACCGGGGTGCAGCTGCTCACTCCAGACTCTTGGAATATCCCGCTAACAGATGCTCGGAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 90 bp GCACCCCGGTGCCTTCTGCTTTATTTTCCATGGGAGGGTGTAATGTaGTGCACAGCCCAGCTGGAAGATTGGCCTGGGTCTCTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: APRCLLLYFPWEGVM*CTAQLEDWPGSLCR
Trigger: TCTACAAAGAGACCCAGGCCAATCTTCCAGCTGGGCTGTGCAGCACATTACACCCTCCCATGGAAAATAAAGCAGAAGGCACCGGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp ATCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGATTTTAATGAACATTCATTTTACAGGGAGTGTCCGCTaGGCTTGCCGCCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: ITSRELLVVPQILMNIHFTGSVR*ACRPPP
Trigger: CGGCGGCGGGCGGCAAGCCAAGCGGACACTCCCTGT...AAAATGAATGTTCATTAAAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp TGTTCCCAAATGGGGCGCTATTTAGGGGAATTTAAAGAGAAAGCTGAGAAGAATGGCACCGGGCCGCGGTaGGTCATCACCATGGGAGGG +
Preference number: 5 (lower is better)
Translates to: CSQMGRYLGEFKEKAEKNGTGPR*VITMGG
Trigger: CCCTCCCATGGTGATGACCAACCGCGGCCCGGTGCC...ATTCTTCTCAGCTTTCTCTTTAAATTCCCCTAAATAGCGCCCCATTTGGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGCCGGCATCGGGCCATTaGGCATCATGCTCACTGGCG +
Preference number: 5 (lower is better)
Translates to: LCTKENLEIQYVHRILGPPASGH*ASCSLA
Trigger: CGCCAGTGAGCATGATGCCAAATGGCCCGATGCCGG...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp ATCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGATTTTAATGAACATTCATTTTGCGCGGTGGATCACGTaGTGCAGCCGGGCTCGGTGG +
Preference number: 5 (lower is better)
Translates to: ITSRELLVVPQILMNIHFARWIT*CSRARW
Trigger: CCACCGAGCCCGGCTGCACAACGTGATCCACCGCGC...AAAATGAATGTTCATTAAAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp TGTTCCCAAATGGGGCGCTATTTAGGGGAATTTAAAGAGAAAGCTGAGAAGAATCCGTTCACGATGACGTaGCAGGCCGCGGCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: CSQMGRYLGEFKEKAEKNPFTMT*QAAAAS
Trigger: CGAGGCGGCCGCGGCCTGCAACGTCATCGTGAACGG...ATTCTTCTCAGCTTTCTCTTTAAATTCCCCTAAATAGCGCCCCATTTGGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp TGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTTGATGGTGGACTTGAAGAGCACTaGGAAGGGACACCACACCTG +
Preference number: 5 (lower is better)
Translates to: WCVDVSGTRGACLPPFDGGLEEH*EGTPHL
Trigger: CAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAAGTCC...ACCATCAAATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 90 bp CCCCGGTGCCTTCTGCTTTATTTTCCATGGGAGGGTGTAATGTGCTaGACAGCCCAGCTGGAAGATTGGCCTGGGTCTCTTTGTAGAAAA +
Preference number: 5 (lower is better)
Translates to: PRCLLLYFPWEGVMC*TAQLEDWPGSLCRK
Trigger: TTTTCTACAAAGAGACCCAGGCCAATCTTCCAGCTGGGCTGTGCAGCACATTACACCCTCCCATGGAAAATAAAGCAGAAGGCACCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 90 bp CGAGCATCTGTTAGCGGGATATTCCAAGAGTCTGGAGTGAGCAGCTaGACCCCGGTGCCTTCTGCTTTATTTTCCATGGGAGGGTGTAAT +
Preference number: 5 (lower is better)
Translates to: RASVSGIFQESGVSS*TPVPSALFSMGGCN
Trigger: ATTACACCCTCCCATGGAAAATAAAGCAGAAGGCACCGGGGTGCAGCTGCTCACTCCAGACTCTTGGAATATCCCGCTAACAGATGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp ATCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGATTTTAATGAACATTCATTTTGGCGAGTCCGCGGACTaGGACGAGCCCTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: ITSRELLVVPQILMNIHFGESAD*DEPCLE
Trigger: CTCCAAGCAGGGCTCGTCCAAGTCCGCGGACTCGCC...AAAATGAATGTTCATTAAAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGGATGACTCTGAAGCATaGGGCCTCCAGGACCACCCC +
Preference number: 5 (lower is better)
Translates to: LCTKENLEIQYVHRILGPDDSEA*GLQDHP
Trigger: GGGGTGGTCCTGGAGGCCCAATGCTTCAGAGTCATC...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGAGGGGGCTGTTGGGGTaGGAGGCATGGTGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPRGLLG*EAWCGG
Trigger: GCCTCCGCACCATGCCTCCAACCCCAACAGCCCCCT...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS TCA 90 bp TCTGCAAAGTTCTTCATCTCCTCATTGATCTCCCTTTTCACTGGGTaGGCCGGCTTCCTGCTCCGTTTATTTTCGGGAGGTCTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: SAKFFISSLISLFTG*AGFLLRLFSGGLPS
Trigger: AGAAGGGAGACCTCCCGAAAATAAACGGAGCAGGAAGCCGGCTCACCCAGTGAAAAGGGAGATCAATGAGGAGATGAAGAACTTTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317357.10
ENST00000477448.1
ENST00000618129.1
CDS-3UTR CAA 90 bp TTTCTGTACTCATCAGAATGGGATACTCCACAACTGTCTCACCAACTCAGTGCCCCGTCCAGGTGGCAGTaGGAAGCACAGTTATTCTCC +
Preference number: 5 (lower is better)
Translates to: FLYSSEWDTPQLSHQLSAPSRWQ*EAQLFS
Trigger: GGAGAATAACTGTGCTTCCAACTGCCACCTGGACGG...GGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCTGATGAGTACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp GCAACCCAGGTCTCCTGGTTCTTGCTCTGGCAGTCTTCACCACCTCATGCTACCTACTGCCATAGTGTTTaGGATAATCCAGTGGTTAAG +
Preference number: 5 (lower is better)
Translates to: ATQVSWFLLWQSSPPHATYCHSV*DNPVVK
Trigger: CTTAACCACTGGATTATCCAAAACACTATGGCAGTA...GGTAGCATGAGGTGGTGAAGACTGCCAGAGCAAGAACCAGGAGACCTGGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR CAA 90 bp CTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCATCCTTGGGCCGACCCGTGGAGCATGTTaGCCTCCATTTGATGGTGCT +
Preference number: 5 (lower is better)
Translates to: LCTKENLEIQYVHRILGPTRGAC*PPFDGA
Trigger: AGCACCATCAAATGGAGGCAAACATGCTCCACGGGT...CGGCCCAAGGATGCGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp CTCCACTTTAATTGCCCTTGTAGTCCTACCATGCACCTTCCATATGCAACTAAACACTGCCATGATCCTTaGACCCTGCAGGTGAGTCAC +
Preference number: 5 (lower is better)
Translates to: LHFNCPCSPTMHLPYATKHCHDP*TLQVSH
Trigger: GTGACTCACCTGCAGGGTCAAAGGATCATGGCAGTG...TTTAGTTGCATATGGAAGGTGCATGGTAGGACTACAAGGGCAATTAAAGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR CAA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCTGATGGGGATGGACTaGGGCACTGGCGTGGGGATT +
Preference number: 5 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPLMGMD*GTGVGI
Trigger: AATCCCCACGCCAGTGCCCAAGTCCATCCCCATCAG...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp ATCACTTCAAGGGAGCTGCTCGTGGTGCCTCAGATTTTAATGAACATTCATTTTATGAAGTTCTCCCCGTaGCTGGAGAACCCGTTGGGG +
Preference number: 5 (lower is better)
Translates to: ITSRELLVVPQILMNIHFMKFSP*LENPLG
Trigger: CCCCAACGGGTTCTCCAGCAACGGGGAGAACTTCAT...AAAATGAATGTTCATTAAAATCTGAGGCACCACGAGCAGCTCCCTTGAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS TCA 90 bp ATGAAAGGTGGTGGAATTAAAGGTACAATAATGGGCACACTGCCATaGTCCTTTGACCCTGCAGGTGAGTCACTGAGTCCATTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: MKGGGIKGTIMGTLP*SFDPAGESLSPFPV
Trigger: CACTGGAAATGGACTCAGTGACTCACCTGCAGGGTCAAAGGATCATGGCAGTGTGCCCATTATTGTACCTTTAATTCCACCACCTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317357.10
ENST00000477448.1
ENST00000618129.1
CDS-3UTR CAA 90 bp GGTGAGATGGTGTGTGGATGTGAGTGGAACCCGTGGAGCATGTTTGCCTCCATTTGTCCTCGGGTAATTTaGGTTTTGGCAAAGAATTTT +
Preference number: 5 (lower is better)
Translates to: GEMVCGCEWNPWSMFASICPRVI*VLAKNF
Trigger: AAAATTCTTTGCCAAAACCAAAATTACCCGAGGACA...AATGGAGGCAAACATGCTCCACGGGTTCCACTCACATCCACACACCATCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp TTTCTGTACTCATCAGAATGGGATACTCCACAACTGTCTCACCAACTCAGTGCCTTCAGTTCAACACTCTaGCTCTGTTCCCAAATGGGG +
Preference number: 5 (lower is better)
Translates to: FLYSSEWDTPQLSHQLSAFSSTL*LCSQMG
Trigger: CCCCATTTGGGAACAGAGCAAGAGTGTTGAACTGAA...GGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCTGATGAGTACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp TTGAAGAGCACTTGGAAGGGACACCACACCTGGGTCTACAGCCTAAACACTCACGAACAAAGGTACCTTTaGTTTCCAGAAGGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: LKSTWKGHHTWVYSLNTHEQRYL*FPEGSK
Trigger: TTTTGACCCTTCTGGAAACAAAAGGTACCTTTGTTC...GTGAGTGTTTAGGCTGTAGACCCAGGTGTGGTGTCCCTTCCAAGTGCTCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS TCA 90 bp TGCAGAAGCTTTTCACCTCACTTCCCATACTCAGGGAATAGCGCTTaGTTCCCACTTTCTGGCACCAGGCACACATTATTTGTACATTTG +
Preference number: 5 (lower is better)
Translates to: CRSFSPHFPYSGNSA*FPLSGTRHTLFVHL
Trigger: CAAATGTACAAATAATGTGTGCCTGGTGCCAGAAAGTGGGAATCAAGCGCTATTCCCTGAGTATGGGAAGTGAGGTGAAAAGCTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000477448.1
CDS-3UTR CAA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGCACTGCCATGATCCTTaGACCCTGCAGGTGAGTCAC +
Preference number: 5 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPHCHDP*TLQVSH
Trigger: GTGACTCACCTGCAGGGTCAAAGGATCATGGCAGTG...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAAAGTTCGCAGTTATTCTaGAAGGCAAGCCTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKSSQLF*KASLGV
Trigger: AACTCCAAGGCTTGCCTTCAAGAATAACTGCGAACT...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp GCCAACAGTACTATTAAGTTCTTGGTAGTCAAGGATGATGACATACATCTGTATCAGGTCTCCTGGTTCTaGCTCTGGCAGTCTTCACCA +
Preference number: 5 (lower is better)
Translates to: ANSTIKFLVVKDDDIHLYQVSWF*LWQSSP
Trigger: TGGTGAAGACTGCCAGAGCAAGAACCAGGAGACCTG...ATACAGATGTATGTCATCATCCTTGACTACCAAGAACTTAATAGTACTGTTGGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR CAA 90 bp TTTCTGTACTCATCAGAATGGGATACTCCACAACTGTCTCACCAACTCAGTGCCTTCTCACTTTCCCTCTaGTTTTCATTGGTTTGTCCA +
Preference number: 5 (lower is better)
Translates to: FLYSSEWDTPQLSHQLSAFSLSL*FSLVCP
Trigger: TGGACAAACCAATGAAAACAAGAGGGAAAGTGAGAA...GGCACTGAGTTGGTGAGACAGTTGTGGAGTATCCCATTCTGATGAGTACAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp TCTAGCAGGTCAGGAAGAGACAGTGCCATCCCAGTAGCTTACCATCTTTTAAAAGATATCCCAAGAGAATaGTGCATTCAGACAGCAGTA +
Preference number: 5 (lower is better)
Translates to: SSRSGRDSAIPVAYHLLKDIPRE*CIQTAV
Trigger: TACTGCTGTCTGAATGCACAATTCTCTTGGGATATC...TTTTAAAAGATGGTAAGCTACTGGGATGGCACTGTCTCTTCCTGACCTGCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp GCCAACAGTACTATTAAGTTCTTGGTAGTCAAGGATGATGACATACATCTGTATGTAACCTCAGGCAAGTaGCTCAACTTTTCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: ANSTIKFLVVKDDDIHLYVTSGK*LNFSGP
Trigger: AGGCCCAGAAAAGTTGAGCAACTTGCCTGAGGTTAC...ATACAGATGTATGTCATCATCCTTGACTACCAAGAACTTAATAGTACTGTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR CAA 90 bp CTCCACTTTAATTGCCCTTGTAGTCCTACCATGCACCTTCCATATGCAACTAAAGCTAACCACATCATTTaGCAGACAAGGAAACTAAGG +
Preference number: 5 (lower is better)
Translates to: LHFNCPCSPTMHLPYATKANHII*QTRKLR
Trigger: CCTTAGTTTCCTTGTCTGCAAAATGATGTGGTTAGC...TTTAGTTGCATATGGAAGGTGCATGGTAGGACTACAAGGGCAATTAAAGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR CAA 90 bp CTCCACTTTAATTGCCCTTGTAGTCCTACCATGCACCTTCCATATGCAACTAAATGTCCTCGGGTAATTTaGGTTTTGGCAAAGAATTTT +
Preference number: 5 (lower is better)
Translates to: LHFNCPCSPTMHLPYATKCPRVI*VLAKNF
Trigger: AAAATTCTTTGCCAAAACCAAAATTACCCGAGGACA...TTTAGTTGCATATGGAAGGTGCATGGTAGGACTACAAGGGCAATTAAAGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR CAA 90 bp TGTTCCCAAATGGGGCGCTATTTAGGGGAATTTAAAGAGAAAGCTGAGAAGAATCGAAAACCATCAGGGTaGAAATTTCATCTGAGTCTT +
Preference number: 5 (lower is better)
Translates to: CSQMGRYLGEFKEKAEKNRKPSG*KFHLSL
Trigger: AAGACTCAGATGAAATTTCAACCCTGATGGTTTTCG...ATTCTTCTCAGCTTTCTCTTTAAATTCCCCTAAATAGCGCCCCATTTGGGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS-3UTR CAA 90 bp CTCCACTTTAATTGCCCTTGTAGTCCTACCATGCACCTTCCATATGCAACTAAAAGTACTATTAAGTTCTaGGTAGTCAAGGATGATGAC +
Preference number: 5 (lower is better)
Translates to: LHFNCPCSPTMHLPYATKSTIKF*VVKDDD
Trigger: GTCATCATCCTTGACTACCAAGAACTTAATAGTACT...TTTAGTTGCATATGGAAGGTGCATGGTAGGACTACAAGGGCAATTAAAGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618129.1
CDS-3UTR CAA 90 bp ACTTGTGAAGTGACTCTGTACAAAGGAGAATCTAGAAATACAGTATGTACACCGGGTCAAAATGTTTGCTaGACAATCTTGGACTACAGA +
Preference number: 5 (lower is better)
Translates to: TCEVTLYKGESRNTVCTPGQNVC*TILDYR
Trigger: TCTGTAGTCCAAGATTGTCAAGCAAACATTTTGACC...CGGTGTACATACTGTATTTCTAGATTCTCCTTTGTACAGAGTCACTTCACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 72 bp GGTCCACCACCTCGCTCCGGCCATGCTCGGCGGGCGTaGGCGCCAGGCTCAGGGCCTGGCCCGAGCAGCCGG +
Preference number: 6 (lower is better)
Translates to: GPPPRSGHARRA*APGSGPGPSSR
Trigger: CCGGCTGCTCGGGCCAGGCCCTGAGCCTGGCGCCCACGCCCGCCGAGCATGGCCGGAGCGAGGTGGTGGACC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 72 bp CGCTCACCGCCGGTTCCTCAGGCGACAGCAGCTTCTTaGGGGGCGCGGGCGGCGGCGGCGGCGGCGGCTGCT +
Preference number: 6 (lower is better)
Translates to: RSPPVPQATAAS*GARAAAAAAAA
Trigger: AGCAGCCGCCGCCGCCGCCGCCGCCCGCGCCCCCCAAGAAGCTGCTGTCGCCTGAGGAACCGGCGGTGAGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000494935.1
CDS GCA 72 bp CCCACGGTCAGGTCGATGACGCCGTCCTGCGGGCCCTaGAGCACGCCTGGGAAGCCGAGCTGGCCGCCCGCG +
Preference number: 6 (lower is better)
Translates to: PTVRSMTPSCGP*STPGKPSWPPA
Trigger: CGCGGGCGGCCAGCTCGGCTTCCCAGGCGTGCTGCAGGGCCCGCAGGACGGCGTCATCGACCTGACCGTGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 72 bp GCGGCGCTCGGCTCGCGCTCCGCCTTGACGTGCGCGTaGAGCGCGCGGTGGATCACGTTGTGCAGCCGGGCT +
Preference number: 6 (lower is better)
Translates to: AALGSRSALTCA*SARWITLCSRA
Trigger: AGCCCGGCTGCACAACGTGATCCACCGCGCGCTGCACGCGCACGTCAAGGCGGAGCGCGAGCCGAGCGCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 72 bp CGCTCCGCGGCGCTCGGCTCGCGCTCCGCCTTGACGTaGGCGTGCAGCGCGCGGTGGATCACGTTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: RSAALGSRSALT*ACSARWITLCS
Trigger: GCTGCACAACGTGATCCACCGCGCGCTGCACGCGCACGTCAAGGCGGAGCGCGAGCCGAGCGCCGCGGAGCG
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 72 bp GTCGTCAGCCATCTTCCGTCGCTCGGTCCGTCCGCATaGGCGCGGGGAGCAAGGGCCGGCGCGGAGAGCGGC +
Preference number: 6 (lower is better)
Translates to: VVSHLPSLGPSA*ARGARAGAESG
Trigger: GCCGCTCTCCGCGCCGGCCCTTGCTCCCCGCGCCCATGCGGACGGACCGAGCGACGGAAGATGGCTGACGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000477448.1
CDS CCA 72 bp GGAGAGACGGTGGTGGACGCCGACGGGCCAGGGCCCTaGCTTTGGCCAGCTGTAGCCACCGGGGAGGGGGCC +
Preference number: 6 (lower is better)
Translates to: GETVVDADGPGP*LWPAVATGEGA
Trigger: GGCCCCCTCCCCGGTGGCTACAGCTGGCCAAAGCCAGGGCCCTGGCCCGTCGGCGTCCACCACCGTCTCTCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS TCA 72 bp TGTGCAGCCGGGCTCGGTGGCCCACGGTCAGGTCGATaGCGCCGTCCTGCGGGCCCTGCAGCACGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: CAAGLGGPRSGR*RRPAGPAARLG
Trigger: TCCCAGGCGTGCTGCAGGGCCCGCAGGACGGCGTCATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCACA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 72 bp TCGCGCTCCGCCTTGACGTGCGCGTGCAGCGCGCGGTaGATCACGTTGTGCAGCCGGGCTCGGTGGCCCACG +
Preference number: 6 (lower is better)
Translates to: SRSALTCACSAR*ITLCSRARWPT
Trigger: CGTGGGCCACCGAGCCCGGCTGCACAACGTGATCCACCGCGCGCTGCACGCGCACGTCAAGGCGGAGCGCGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CAA 90 bp TCGCGCTCCGCCTTGACGTGCGCGTGCAGCGCGCGGTGGATCACGTaGTGCAGCCGGGCTCGGTGGCCCACGGTCAGGTCGATGACGCCG +
Preference number: 6 (lower is better)
Translates to: SRSALTCACSARWIT*CSRARWPTVRSMTP
Trigger: CGGCGTCATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCACAACGTGATCCACCGCGCGCTGCACGCGCACGTCAAGGCGGAGCGCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 72 bp AGCGCGCGGTGGATCACGTTGTGCAGCCGGGCTCGGTaGCCCACGGTCAGGTCGATGACGCCGTCCTGCGGG +
Preference number: 6 (lower is better)
Translates to: SARWITLCSRAR*PTVRSMTPSCG
Trigger: CCCGCAGGACGGCGTCATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCACAACGTGATCCACCGCGCGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CAA 72 bp GCCTTGACGTGCGCGTGCAGCGCGCGGTGGATCACGTaGTGCAGCCGGGCTCGGTGGCCCACGGTCAGGTCG +
Preference number: 6 (lower is better)
Translates to: ALTCACSARWIT*CSRARWPTVRS
Trigger: CGACCTGACCGTGGGCCACCGAGCCCGGCTGCACAACGTGATCCACCGCGCGCTGCACGCGCACGTCAAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS TCA 72 bp CGCCCGCCGCCGCGGAGTCGCCAGGGGCGTTCGGAATaGAGTTCTCCCCGTTGCTGGAGAACCCGTTGGGGG +
Preference number: 6 (lower is better)
Translates to: RPPPRSRQGRSE*SSPRCWRTRWG
Trigger: CCCCCAACGGGTTCTCCAGCAACGGGGAGAACTTCATTCCGAACGCCCCTGGCGACTCCGCGGCGGCGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CAA 90 bp AGATGGAGAGACGGTGGTGGACGCCGACGGGCCAGGGCCCTGGCTTaGGCCAGCTGTAGCCACCGGGGAGGGGGCCTTCCTCCGAGCATC +
Preference number: 6 (lower is better)
Translates to: RWRDGGGRRRARALA*ASCSHRGGGLPPSI
Trigger: GATGCTCGGAGGAAGGCCCCCTCCCCGGTGGCTACAGCTGGCCAAAGCCAGGGCCCTGGCCCGTCGGCGTCCACCACCGTCTCTCCATCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 72 bp TTGACGTGCGCGTGCAGCGCGCGGTGGATCACGTTGTaGAGCCGGGCTCGGTGGCCCACGGTCAGGTCGATG +
Preference number: 6 (lower is better)
Translates to: LTCACSARWITL*SRARWPTVRSM
Trigger: CATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCACAACGTGATCCACCGCGCGCTGCACGCGCACGTCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CAA 72 bp TGCTCCATGAAGATGGGCAGCGGCACCGGGCCGCGGTaGGTCATCACCATGGGAGGGCTCCGAGGCGGGACG +
Preference number: 6 (lower is better)
Translates to: CSMKMGSGTGPR*VITMGGLRGGT
Trigger: CGTCCCGCCTCGGAGCCCTCCCATGGTGATGACCAACCGCGGCCCGGTGCCGCTGCCCATCTTCATGGAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CAA 90 bp ATGATCTGCTGCTCCATGAAGATGGGCAGCGGCACCGGGCCGCGGTaGGTCATCACCATGGGAGGGCTCCGAGGCGGGACGCCAAGGGGA +
Preference number: 6 (lower is better)
Translates to: MICCSMKMGSGTGPR*VITMGGLRGGTPRG
Trigger: TCCCCTTGGCGTCCCGCCTCGGAGCCCTCCCATGGTGATGACCAACCGCGGCCCGGTGCCGCTGCCCATCTTCATGGAGCAGCAGATCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 72 bp TGCGGAGGCCCGCGGATGAAGGGCGGGCGGATCTGCTaGATGATCTGCTGCTCCATGAAGATGGGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: CGGPRMKGGRIC*MICCSMKMGSG
Trigger: GCCGCTGCCCATCTTCATGGAGCAGCAGATCATGCAGCAGATCCGCCCGCCCTTCATCCGCGGGCCTCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 72 bp TGGTGCGGAGGCCCGCGGATGAAGGGCGGGCGGATCTaGTGCATGATCTGCTGCTCCATGAAGATGGGCAGC +
Preference number: 6 (lower is better)
Translates to: WCGGPRMKGGRI*CMICCSMKMGS
Trigger: GCTGCCCATCTTCATGGAGCAGCAGATCATGCAGCAGATCCGCCCGCCCTTCATCCGCGGGCCTCCGCACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 72 bp TCATCTGGGGCACCGGCATCGGGCCATTTGGCATCATaGTCACTGGCGGGAAGGGAAGACTCGGCAGCGGGG +
Preference number: 6 (lower is better)
Translates to: SSGAPASGHLAS*SLAGREDSAAG
Trigger: CCCCGCTGCCGAGTCTTCCCTTCCCGCCAGTGAGCATGATGCCAAATGGCCCGATGCCGGTGCCCCAGATGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 72 bp GCCATGGCAGCCTTCTCCGCGGGTTTTGGCACAGGCTaGATCACGCAGCCGGTCTTGGGCAGCATCCGCAGA +
Preference number: 6 (lower is better)
Translates to: AMAAFSAGFGTG*ITQPVLGSIRR
Trigger: TCTGCGGATGCTGCCCAAGACCGGCTGCGTGATCCAGCCTGTGCCAAAACCCGCGGAGAAGGCTGCCATGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000494935.1
CDS CCA 72 bp GATGCACGGTGCCATGGCAGCCTTCTCCGCGGGTTTTaGCACAGGCTGGATCACGCAGCCGGTCTTGGGCAG +
Preference number: 6 (lower is better)
Translates to: DARCHGSLLRGF*HRLDHAAGLGQ
Trigger: CTGCCCAAGACCGGCTGCGTGATCCAGCCTGTGCCAAAACCCGCGGAGAAGGCTGCCATGGCACCGTGCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000494935.1
CDS CCA 72 bp GGGACGCCAAGGGGAGGCCCGATGCTAGCAGGTGGCTaGACGGAGACAGGAGGGATATTTGGAGTCTCGCTG +
Preference number: 6 (lower is better)
Translates to: GTPRGGPMLAGG*TETGGIFGVSL
Trigger: CAGCGAGACTCCAAATATCCCTCCTGTCTCCGTCCAGCCACCTGCTAGCATCGGGCCTCCCCTTGGCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 72 bp AGGCGGGACGCCAAGGGGAGGCCCGATGCTAGCAGGTaGCTGGACGGAGACAGGAGGGATATTTGGAGTCTC +
Preference number: 6 (lower is better)
Translates to: RRDAKGRPDASR*LDGDRRDIWSL
Trigger: GAGACTCCAAATATCCCTCCTGTCTCCGTCCAGCCACCTGCTAGCATCGGGCCTCCCCTTGGCGTCCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CAA 90 bp ACGGCAGCCCGAAATTCATCATCTGGGGCACCGGCATCGGGCCATTaGGCATCATGCTCACTGGCGGGAAGGGAAGACTCGGCAGCGGGG +
Preference number: 6 (lower is better)
Translates to: TAARNSSSGAPASGH*ASCSLAGREDSAAG
Trigger: CCCCGCTGCCGAGTCTTCCCTTCCCGCCAGTGAGCATGATGCCAAATGGCCCGATGCCGGTGCCCCAGATGATGAATTTCGGGCTGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CAA 90 bp GCCGCCTCCCCGTCCAGGTGGCAGTTGGAAGCACAGTTATTCTCCTaGACCGACTCTAGCTCGCTCACCGCCGGTTCCTCAGGCGACAGC +
Preference number: 6 (lower is better)
Translates to: AASPSRWQLEAQLFS*TDSSSLTAGSSGDS
Trigger: GCTGTCGCCTGAGGAACCGGCGGTGAGCGAGCTAGAGTCGGTCAAGGAGAATAACTGTGCTTCCAACTGCCACCTGGACGGGGAGGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000494935.1
CDS CCA 72 bp AGCGGGGCAAGCGACGGCAGCCCGAAATTCATCATCTaGGGCACCGGCATCGGGCCATTTGGCATCATGCTC +
Preference number: 6 (lower is better)
Translates to: SGASDGSPKFII*GTGIGPFGIML
Trigger: GAGCATGATGCCAAATGGCCCGATGCCGGTGCCCCAGATGATGAATTTCGGGCTGCCGTCGCTTGCCCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 72 bp CGGGTTTTGGCACAGGCTGGATCACGCAGCCGGTCTTaGGCAGCATCCGCAGAGCATAGGCATGGTCCTCGT +
Preference number: 6 (lower is better)
Translates to: RVLAQAGSRSRS*AASAEHRHGPR
Trigger: ACGAGGACCATGCCTATGCTCTGCGGATGCTGCCCAAGACCGGCTGCGTGATCCAGCCTGTGCCAAAACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000494935.1
CDS CAA 90 bp GGGATGGACTTGGGCACTGGCGTGGGGATTTTAGTGACAGAGCAGTaGGCAGTGTCAGATGGAGAGACGGTGGTGGACGCCGACGGGCCA +
Preference number: 6 (lower is better)
Translates to: GMDLGTGVGILVTEQ*AVSDGETVVDADGP
Trigger: TGGCCCGTCGGCGTCCACCACCGTCTCTCCATCTGACACTGCCAACTGCTCTGTCACTAAAATCCCCACGCCAGTGCCCAAGTCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 72 bp AGAAGCGGGGTCTCTTCTAGCGGCGGAGGACGTCAGTaGCTGTCACGGGTAAGGATAGTGCGGAGAGTCTCG +
Preference number: 6 (lower is better)
Translates to: RSGVSSSGGGRQ*LSRVRIVRRVS
Trigger: CGAGACTCTCCGCACTATCCTTACCCGTGACAGCCACTGACGTCCTCCGCCGCTAGAAGAGACCCCGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000477448.1
CDS CAA 90 bp TCCTCGCCCATCAGCTTTTTGGCCGCCTCCCCGTCCAGGTGGCAGTaGGAAGCACAGTTATTCTCCTTGACCGACTCTAGCTCGCTCACC +
Preference number: 6 (lower is better)
Translates to: SSPISFLAASPSRWQ*EAQLFSLTDSSSLT
Trigger: GGTGAGCGAGCTAGAGTCGGTCAAGGAGAATAACTGTGCTTCCAACTGCCACCTGGACGGGGAGGCGGCCAAAAAGCTGATGGGCGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000494935.1
CDS TCA 72 bp CGTCCAGGTGGCAGTTGGAAGCACAGTTATTCTCCTTaGCCGACTCTAGCTCGCTCACCGCCGGTTCCTCAG +
Preference number: 6 (lower is better)
Translates to: RPGGSWKHSYSP*PTLARSPPVPQ
Trigger: CTGAGGAACCGGCGGTGAGCGAGCTAGAGTCGGTCAAGGAGAATAACTGTGCTTCCAACTGCCACCTGGACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000494935.1
CDS CCA 72 bp GAAATTCATCATCTGGGGCACCGGCATCGGGCCATTTaGCATCATGCTCACTGGCGGGAAGGGAAGACTCGG +
Preference number: 6 (lower is better)
Translates to: EIHHLGHRHRAI*HHAHWREGKTR
Trigger: CCGAGTCTTCCCTTCCCGCCAGTGAGCATGATGCCAAATGGCCCGATGCCGGTGCCCCAGATGATGAATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS CCA 72 bp TCGCCCATCAGCTTTTTGGCCGCCTCCCCGTCCAGGTaGCAGTTGGAAGCACAGTTATTCTCCTTGACCGAC +
Preference number: 6 (lower is better)
Translates to: SPISFLAASPSR*QLEAQLFSLTD
Trigger: GTCGGTCAAGGAGAATAACTGTGCTTCCAACTGCCACCTGGACGGGGAGGCGGCCAAAAAGCTGATGGGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000494935.1
CDS CAA 72 bp CGAAATTCATCATCTGGGGCACCGGCATCGGGCCATTaGGCATCATGCTCACTGGCGGGAAGGGAAGACTCG +
Preference number: 6 (lower is better)
Translates to: RNSSSGAPASGH*ASCSLAGREDS
Trigger: CGAGTCTTCCCTTCCCGCCAGTGAGCATGATGCCAAATGGCCCGATGCCGGTGCCCCAGATGATGAATTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 72 bp AGTAGGCTCGTCGGCAGGCCGCAAAGCACTTCTCGCTaGAGAAGCTTTTCACCTCACTTCCCATACTCAGGG +
Preference number: 6 (lower is better)
Translates to: SRLVGRPQSTSR*RSFSPHFPYSG
Trigger: CCCTGAGTATGGGAAGTGAGGTGAAAAGCTTCTGCAGCGAGAAGTGCTTTGCGGCCTGCCGACGAGCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000477448.1
CDS CAA 72 bp ATCAGCTTTTTGGCCGCCTCCCCGTCCAGGTGGCAGTaGGAAGCACAGTTATTCTCCTTGACCGACTCTAGC +
Preference number: 6 (lower is better)
Translates to: ISFLAASPSRWQ*EAQLFSLTDSS
Trigger: GCTAGAGTCGGTCAAGGAGAATAACTGTGCTTCCAACTGCCACCTGGACGGGGAGGCGGCCAAAAAGCTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000494935.1
CDS GCA 72 bp GTTAGCGGGATATTCCAAGAGTCTGGAGTGAGCAGCTaGACCCCGGTGCCTTCTGCTTTATTTTCCATGGGA +
Preference number: 6 (lower is better)
Translates to: VSGIFQESGVSS*TPVPSALFSMG
Trigger: TCCCATGGAAAATAAAGCAGAAGGCACCGGGGTGCAGCTGCTCACTCCAGACTCTTGGAATATCCCGCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS TCA 72 bp GAGCATCTGTTAGCGGGATATTCCAAGAGTCTGGAGTaGGCAGCTGCACCCCGGTGCCTTCTGCTTTATTTT +
Preference number: 6 (lower is better)
Translates to: EHLLAGYSKSLE*AAAPRCLLLYF
Trigger: AAAATAAAGCAGAAGGCACCGGGGTGCAGCTGCTCACTCCAGACTCTTGGAATATCCCGCTAACAGATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS GCA 72 bp CTTCTGCTTTATTTTCCATGGGAGGGTGTAATGTGCTaGACAGCCCAGCTGGAAGATTGGCCTGGGTCTCTT +
Preference number: 6 (lower is better)
Translates to: LLLYFPWEGVMC*TAQLEDWPGSL
Trigger: AAGAGACCCAGGCCAATCTTCCAGCTGGGCTGTGCAGCACATTACACCCTCCCATGGAAAATAAAGCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317357.10
CDS TCA 72 bp TTCTTCATCTCCTCATTGATCTCCCTTTTCACTGGGTaGGCCGGCTTCCTGCTCCGTTTATTTTCGGGAGGT +
Preference number: 6 (lower is better)
Translates to: FFISSLISLFTG*AGFLLRLFSGG
Trigger: ACCTCCCGAAAATAAACGGAGCAGGAAGCCGGCTCACCCAGTGAAAAGGGAGATCAATGAGGAGATGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317357.10
ENST00000477448.1
ENST00000618129.1
CDS TCA 72 bp TTTTCACCTCACTTCCCATACTCAGGGAATAGCGCTTaGTTCCCACTTTCTGGCACCAGGCACACATTATTT +
Preference number: 6 (lower is better)
Translates to: FSPHFPYSGNSA*FPLSGTRHTLF
Trigger: AAATAATGTGTGCCTGGTGCCAGAAAGTGGGAATCAAGCGCTATTCCCTGAGTATGGGAAGTGAGGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317357.10
ENST00000477448.1
CDS CAA 72 bp CATAAATTATGCAGAGTCATCTTCTGCTCATCCTCCTaGGTAGAATGGGAAAAGCTGAATGACACAGACAAA +
Preference number: 6 (lower is better)
Translates to: HKLCRVIFCSSS*VEWEKLNDTDK
Trigger: TTTGTCTGTGTCATTCAGCTTTTCCCATTCTACCAAGGAGGATGAGCAGAAGATGACTCTGCATAATTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477448.1