RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SOAT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000057252

Ensembl transcript IDs: ENST00000367619.8, ENST00000426956.1, ENST00000539888.5, ENST00000540564.5

Found 348 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATaGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAA +
Preference number: 1 (lower is better)
Translates to: TLERYRHRNLLHYPK*QSLDWGFSSFPNPK
Trigger: TTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR CCA 90 bp AAAGCCTGGAGTGGTCCAAATAACACAGATAACTTCAGTAACAACTaGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATCTTCAGTG +
Preference number: 1 (lower is better)
Translates to: KAWSGPNNTDNFSNN*KQLAPNQGATQSSV
Trigger: CACTGAAGATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTATCTGTGTTATTTGGACCACTCCAGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR TCA 90 bp GTCAAGAAACAAAACAGATATAATTACCAAGGGATAAAGCTGATATaGCCCAGCAACAATCTGTCATTACTTCAGCTGTTAGTCGGTCTT +
Preference number: 1 (lower is better)
Translates to: VKKQNRYNYQGIKLI*PSNNLSLLQLLVGL
Trigger: AAGACCGACTAACAGCTGAAGTAATGACAGATTGTTGCTGGGTCATATCAGCTTTATCCCTTGGTAATTATATCTGTTTTGTTTCTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR TCA 90 bp CTTCCCTTGAGTGTATTTGTTTCCGTTGAAGTTGGATTTAATGTTTaGAAATTACCTAAACTCATCTGGACCAGTGGTATCGTGAGTAAG +
Preference number: 1 (lower is better)
Translates to: LPLSVFVSVEVGFNV*KLPKLIWTSGIVSK
Trigger: CTTACTCACGATACCACTGGTCCAGATGAGTTTAGGTAATTTTCAAACATTAAATCCAACTTCAACGGAAACAAATACACTCAAGGGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR TCA 90 bp CTACTGATTTTCAAACTAGGCATTAAATTTAGGGTGAGAAAGAAGTaGTACACTCTGTTTCAACTAGGGTGGTTGCATATTATCCTCTCT +
Preference number: 1 (lower is better)
Translates to: LLIFKLGIKFRVRKK*YTLFQLGWLHIILS
Trigger: AGAGAGGATAATATGCAACCACCCTAGTTGAAACAGAGTGTATCACTTCTTTCTCACCCTAAATTTAATGCCTAGTTTGAAAATCAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR TCA 90 bp GATTTCTTCCTAAGTGTTTTGGCTAATTCAGTGGCCAAGAAACTATaGTGTTTATTCTCTGATTGGACAGAGTCAAGAAACAAAACAGAT +
Preference number: 1 (lower is better)
Translates to: DFFLSVLANSVAKKL*CLFSDWTESRNKTD
Trigger: ATCTGTTTTGTTTCTTGACTCTGTCCAATCAGAGAATAAACATCATAGTTTCTTGGCCACTGAATTAGCCAAAACACTTAGGAAGAAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR TCA 90 bp ATTCATAAATCTTACTTTGAGTGGAAAGTTGAACTACATGGTCTCTaGTACCCCTTCCAATGCTCAATCTTTACAATCATACCTCATACA +
Preference number: 1 (lower is better)
Translates to: IHKSYFEWKVELHGL*YPFQCSIFTIIPHT
Trigger: TGTATGAGGTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAACTTTCCACTCAAAGTAAGATTTATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTCTCCATCTCCCGGCTTaGAGCCATCTTCCCACCTCA +
Preference number: 2 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPLHLPA*SHLPTS
Trigger: TGAGGTGGGAAGATGGCTTCAAGCCGGGAGATGGAG...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTAGGCAGAGGTTGCAGTaGGCTGAGTTCACGCCATTG +
Preference number: 2 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPRQRLQ*AEFTPL
Trigger: CAATGGCGTGAACTCAGCTCACTGCAACCTCTGCCT...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTTGTTGCCCATGGCTCTaGAATGGAGGGAACTGGGAC +
Preference number: 2 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPCCPWL*NGGNWD
Trigger: GTCCCAGTTCCCTCCATTTCAGAGCCATGGGCAACA...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR GCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCAGGGAGGCAGAGGTTaGAGTGAGCTGAGTTCACGC +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMQGGRG*SELSSR
Trigger: GCGTGAACTCAGCTCACTGCAACCTCTGCCTCCCTG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTCTATGTTGCCCAGGCTaGTCTCAAACTTCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPLCCPG*SQTSEL
Trigger: GAGCTCAGAAGTTTGAGACCAGCCTGGGCAACATAG...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTGAACTACATGGTCTCTaGTACCCCTTCCAATGCTCA +
Preference number: 2 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPELHGL*YPFQCS
Trigger: TGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTC...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGAGGCAGAGGTTGCAGTaGGCTGAGATCACAGCACTG +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMRQRLQ*AEITAL
Trigger: CAGTGCTGTGATCTCAGCTCACTGCAACCTCTGCCT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGTGTTGCCCATGGCTCTaGAATGGAGGGAACTGGGAC +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMCCPWL*NGGNWD
Trigger: GTCCCAGTTCCCTCCATTTCAGAGCCATGGGCAACA...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR GCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTTGTGCAGAACATTACTaGGGGAACATGCAGAGTACC +
Preference number: 2 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPCAEHY*GNMQST
Trigger: GGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACA...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTCTACCCAATCTTCAGTaGCAAGGAGGAAACAAAGTC +
Preference number: 2 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPLPNLQ*QGGNKV
Trigger: GACTTTGTTTCCTCCTTGTCACTGAAGATTGGGTAG...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTAAAATTAGCTGGACATaGTGGCAGGCACCTGTAATG +
Preference number: 2 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPKISWT*WQAPVM
Trigger: CATTACAGGTGCCTGCCACCATGTCCAGCTAATTTT...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGGACCTAGGAATGGAGTaGGTCATCTGTAAAGCCTGG +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMDLGME*VICKAW
Trigger: CCAGGCTTTACAGATGACTCACTCCATTCCTAGGTC...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGAAAATTAGCCAGGCGTaGCCCTGTAATCCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMKISQA*PCNPSY
Trigger: GTAGCTGGGATTACAGGGCCACGCCTGGCTAATTTT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCAGTTTGGCTTCAAGTaGCCTAGGAATGGAGTGAGT +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMQFGFK*PRNGVS
Trigger: ACTCACTCCATTCCTAGGTCACTTGAAGCCAAACTG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGAGTGGGAGTTTTGCTTaGGGTGAAGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMSGSFA*GEEFET
Trigger: GGTCTCAAACTCTTCACCTCAAGCAAAACTCCCACT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTAGGGTGAGAAAGAAGTaGTACACTCTGTTTCAACTA +
Preference number: 2 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPRVRKK*YTLFQL
Trigger: TAGTTGAAACAGAGTGTATCACTTCTTTCTCACCCT...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR GCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGTGTGCAGAACATTACTaGGGGAACATGCAGAGTACC +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMCAEHY*GNMQST
Trigger: GGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACA...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTAACTTCAGTAACAACTaGAAACAGCTGGCTCCAAAT +
Preference number: 2 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPNFSNN*KQLAPN
Trigger: ATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTT...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGGGGATAAAGCTGATATaGCCCAGCAACAATCTGTCA +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMGIKLI*PSNNLS
Trigger: TGACAGATTGTTGCTGGGTCATATCAGCTTTATCCC...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCTCCATCTCCCGGCTTaGAGCCATCTTCCCACCTCA +
Preference number: 2 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMLHLPA*SHLPTS
Trigger: TGAGGTGGGAAGATGGCTTCAAGCCGGGAGATGGAG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTGCATTAAATTTAGGGTaGGAAAGAAGTGATACACTC +
Preference number: 2 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPALNLG*ERSDTL
Trigger: GAGTGTATCACTTCTTTCTCACCCTAAATTTAATGC...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR GCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACCAGGGAGGCAGAGGTTaGAGTGAGCTGAGTTCACGC +
Preference number: 2 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNQGGRG*SELSSR
Trigger: GCGTGAACTCAGCTCACTGCAACCTCTGCCTCCCTG...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGAGAGAGCCTCTCAAGTaGCTGTTCCAAGTAACAACT +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMREPLK*LFQVTT
Trigger: AGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACGACCTAGGAATGGAGTaGGTCATCTGTAAAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYDLGME*VICKAW
Trigger: CCAGGCTTTACAGATGACTCACTCCATTCCTAGGTC...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTGAACTACATGGTCTCTaGTACCCCTTCCAATGCTCA +
Preference number: 2 (lower is better)
Translates to: TITILLCRTLLREHAEYLELHGL*YPFQCS
Trigger: TGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTC...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGGAGGTTGCAGTGAGCTaGGTTCACGCCATTGCACTC +
Preference number: 2 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMEVAVS*VHAIAL
Trigger: GAGTGCAATGGCGTGAACTCAGCTCACTGCAACCTC...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACAGGCAGAGGTTGCAGTaGGCTGAGTTCACGCCATTG +
Preference number: 2 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNRQRLQ*AEFTPL
Trigger: CAATGGCGTGAACTCAGCTCACTGCAACCTCTGCCT...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTTTGTTGTTGCAATCTTaGGCAGGAAAATCACTAATA +
Preference number: 2 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPLLLQS*AGKSLI
Trigger: TATTAGTGATTTTCCTGCCCAAGATTGCAACAACAA...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTTGTACAAGACTCCAGTaGACTTCCAACAGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: TITILLCRTLLREHAEYLCTRLQ*TSNSLA
Trigger: AGCCAAACTGTTGGAAGTTCACTGGAGTCTTGTACA...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGGTGGCCAAGAAACTATaGTGTTTATTCTCTGATTGG +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMVAKKL*CLFSDW
Trigger: CCAATCAGAGAATAAACATCATAGTTTCTTGGCCAC...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGGCTTCACAGAAATCATaGCCTATAGAGAAAACAAGG +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMASQKS*PIEKTR
Trigger: CCTTGTTTTCTCTATAGGTCATGATTTCTGTGAAGC...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGTCCATTAGGGCTTATTaGCAGCAGAAATGTGAATGT +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMSIRAY*QQKCEC
Trigger: ACATTCACATTTCTGCTGTCAATAAGCCCTAATGGA...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACACAACTGGAAACAGCTaGCTCCAAATCAGGGAGCTA +
Preference number: 2 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYTTGNS*LQIREL
Trigger: TAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGT...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCTAGATTCAAAAGATTaGCTTGCTCATAACCAGGTC +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMLDSKD*LAHNQV
Trigger: GACCTGGTTATGAGCAAGCCAATCTTTTGAATCTAG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATACAACTGGAAACAGCTaGCTCCAAATCAGGGAGCTA +
Preference number: 2 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNTTGNS*LQIREL
Trigger: TAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGT...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTGTCATCTGTAAAGCCTaGAGTGGTCCAAATAACACA +
Preference number: 2 (lower is better)
Translates to: TITILLCRTLLREHAEYLVICKA*SGPNNT
Trigger: TGTGTTATTTGGACCACTCCAGGCTTTACAGATGAC...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCTATGTTGCCCAGGCTaGTCTCAAACTTCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMLCCPG*SQTSEL
Trigger: GAGCTCAGAAGTTTGAGACCAGCCTGGGCAACATAG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGTTCCCAATCCAAAATTaGCACCTTTTTCCATGGAAA +
Preference number: 2 (lower is better)
Translates to: NTHTGKIQTQESAALPQMFPIQN*HLFPWK
Trigger: TTTCCATGGAAAAAGGTGCCAATTTTGGATTGGGAA...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATTGTACAAGACTCCAGTaGACTTCCAACAGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNCTRLQ*TSNSLA
Trigger: AGCCAAACTGTTGGAAGTTCACTGGAGTCTTGTACA...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGGAACTACATGGTCTCTaGTACCCCTTCCAATGCTCA +
Preference number: 2 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMELHGL*YPFQCS
Trigger: TGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTC...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCTCCAGAGCACTATTTaGGTCCAGGAGTTTGAGACT +
Preference number: 2 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMLQSTI*VQEFET
Trigger: AGTCTCAAACTCCTGGACTCAAATAGTGCTCTGGAG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACACAACTGGAAACAGCTaGCTCCAAATCAGGGAGCTA +
Preference number: 2 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNTTGNS*LQIREL
Trigger: TAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGT...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTAACTTCAGTAACAACTaGAAACAGCTGGCTCCAAAT +
Preference number: 2 (lower is better)
Translates to: TITILLCRTLLREHAEYLNFSNN*KQLAPN
Trigger: ATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTT...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCTACCCAATCTTCAGTaGCAAGGAGGAAACAAAGTC +
Preference number: 2 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMLPNLQ*QGGNKV
Trigger: GACTTTGTTTCCTCCTTGTCACTGAAGATTGGGTAG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACGTGGCCAAGAAACTATaGTGTTTATTCTCTGATTGG +
Preference number: 2 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYVAKKL*CLFSDW
Trigger: CCAATCAGAGAATAAACATCATAGTTTCTTGGCCAC...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATGTCATCTGTAAAGCCTaGAGTGGTCCAAATAACACA +
Preference number: 2 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNVICKA*SGPNNT
Trigger: TGTGTTATTTGGACCACTCCAGGCTTTACAGATGAC...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACAGAGAGCCTCTCAAGTaGCTGTTCCAAGTAACAACT +
Preference number: 2 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNREPLK*LFQVTT
Trigger: AGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCT...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATGTGGCCAAGAAACTATaGTGTTTATTCTCTGATTGG +
Preference number: 2 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNVAKKL*CLFSDW
Trigger: CCAATCAGAGAATAAACATCATAGTTTCTTGGCCAC...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATGCTTCACAGAAATCATaGCCTATAGAGAAAACAAGG +
Preference number: 2 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNASQKS*PIEKTR
Trigger: CCTTGTTTTCTCTATAGGTCATGATTTCTGTGAAGC...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGTTACCTAAACTCATCTaGACCAGTGGTATCGTGAGT +
Preference number: 2 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMLPKLI*TSGIVS
Trigger: ACTCACGATACCACTGGTCCAGATGAGTTTAGGTAA...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCTGTTTCAACTAGGGTaGTTGCATATTATCCTCTCT +
Preference number: 2 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMLFQLG*LHIILS
Trigger: AGAGAGGATAATATGCAACCACCCTAGTTGAAACAG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR TCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACAAAGTGACCATTCCTTaGAGTGCTACTGTTTTTGAA +
Preference number: 2 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNKVTIP*SATVFE
Trigger: TTCAAAAACAGTAGCACTTCAAGGAATGGTCACTTT...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR GCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACATTACAATACTGTTGTaGAGAACATTACTGCGGGAA +
Preference number: 2 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNITILL*RTLLRE
Trigger: TTCCCGCAGTAATGTTCTGCACAACAGTATTGTAAT...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGTTGTTGTTGCAATCTTaGGCAGGAAAATCACTAATA +
Preference number: 2 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMLLLQS*AGKSLI
Trigger: TATTAGTGATTTTCCTGCCCAAGATTGCAACAACAA...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR TCA 72 bp AGAGCACTATTTGAGTCCAGGAGTTTGAGACTGCAGTaGGCTATGATCACGCTACTACCAGCCTGGGCAACA +
Preference number: 3 (lower is better)
Translates to: RALFESRSLRLQ*AMITLLPAWAT
Trigger: TGTTGCCCAGGCTGGTAGTAGCGTGATCATAGCTCACTGCAGTCTCAAACTCCTGGACTCAAATAGTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR GCA 72 bp CACACACACTGGAAAGATACAGACACAGGAATCTGCTaGATTACCCCAAATGGCAAAGTCTTGACTGGGGCT +
Preference number: 3 (lower is better)
Translates to: HTHWKDTDTGIC*ITPNGKVLTGA
Trigger: AGCCCCAGTCAAGACTTTGCCATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCTTGAGGTGAAGAGTTaGAGACCAGCCTGGGCAACA +
Preference number: 3 (lower is better)
Translates to: NTHTGKIQTQESAALPQMLEVKS*RPAWAT
Trigger: TGTTGCCCAGGCTGGTCTCAAACTCTTCACCTCAAG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTACCCAGAACAGACCTTaGTGTGTATACAGTGTATGT +
Preference number: 3 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPTQNRP*CVYSVC
Trigger: ACATACACTGTATACACACAAAGGTCTGTTCTGGGT...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR CCA 72 bp AATCTGCTGCATTACCCCAAATGGCAAAGTCTTGACTaGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCA +
Preference number: 3 (lower is better)
Translates to: NLLHYPKWQSLD*GFSSFPNPKLA
Trigger: TGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCATTTGGGGTAATGCAGCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTACAATTACAATACTGTaGTGCAGAACATTACTGCGG +
Preference number: 3 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPTITIL*CRTLLR
Trigger: CCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTGAAGCAGAGAGCTTTTaGAAAAATAGCCTTGATCAA +
Preference number: 3 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPEAESF*KNSLDQ
Trigger: TTGATCAAGGCTATTTTTCAAAAAGCTCTCTGCTTC...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR CCA 72 bp AGTGGTCCAAATAACACAGATAACTTCAGTAACAACTaGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAA +
Preference number: 3 (lower is better)
Translates to: SGPNNTDNFSNN*KQLAPNQGATQ
Trigger: TTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTATCTGTGTTATTTGGACCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGATTCAAAAGATTGGCTaGCTCATAACCAGGTCTCAG +
Preference number: 3 (lower is better)
Translates to: NTHTGKIQTQESAALPQMIQKIG*LITRSQ
Trigger: CTGAGACCTGGTTATGAGCAAGCCAATCTTTTGAAT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR TCA 72 bp AAAAGTTCTGCTCTGCTTAAGTGTACAAGACTCCAGTaGACTTCCAACAGTTTGGCTTCAAGTGACCTAGGA +
Preference number: 3 (lower is better)
Translates to: KSSALLKCTRLQ*TSNSLASSDLG
Trigger: TCCTAGGTCACTTGAAGCCAAACTGTTGGAAGTTCACTGGAGTCTTGTACACTTAAGCAGAGCAGAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR CCA 72 bp CAGATTTACATGACCCTTCTGGTGCTCAGAACACTATaGATTAACACACACACTGGAAAGATACAGACACAG +
Preference number: 3 (lower is better)
Translates to: QIYMTLLVLRTL*INTHTGKIQTQ
Trigger: CTGTGTCTGTATCTTTCCAGTGTGTGTGTTAATCCATAGTGTTCTGAGCACCAGAAGGGTCATGTAAATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGACAATTACAATACTGTaGTGCAGAACATTACTGCGG +
Preference number: 3 (lower is better)
Translates to: NTHTGKIQTQESAALPQMTITIL*CRTLLR
Trigger: CCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGAGTTCTACATATTTGTaGTTGCAATCTTGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: NTHTGKIQTQESAALPQMSSTYL*LQSWAG
Trigger: TCCTGCCCAAGATTGCAACAACAAATATGTAGAACT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCTTGAGGTGAAGAGTTaGAGACCAGCCTGGGCAACA +
Preference number: 3 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMLEVKS*RPAWAT
Trigger: TGTTGCCCAGGCTGGTCTCAAACTCTTCACCTCAAG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGTTTCCCAATCCAAAATaGGCACCTTTTTCCATGGAA +
Preference number: 3 (lower is better)
Translates to: NTHTGKIQTQESAALPQMFPNPK*APFSME
Trigger: TTCCATGGAAAAAGGTGCCAATTTTGGATTGGGAAA...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGTGTAGTTCTACATATTaGTTGTTGCAATCTTGGGCA +
Preference number: 3 (lower is better)
Translates to: NTHTGKIQTQESAALPQMCSSTY*LLQSWA
Trigger: TGCCCAAGATTGCAACAACAAATATGTAGAACTACA...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR TCA 72 bp GAAAATTACCTAAACTCATCTGGACCAGTGGTATCGTaGGTAAGATACGTGATTAAGCTGGATACTTGTGGT +
Preference number: 3 (lower is better)
Translates to: ENYLNSSGPVVS*VRYVIKLDTCG
Trigger: ACCACAAGTATCCAGCTTAATCACGTATCTTACTCACGATACCACTGGTCCAGATGAGTTTAGGTAATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACTTCTTCCTAAGTGTTTaGGCTAATTCAGTGGCCAAG +
Preference number: 3 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNFFLSV*ANSVAK
Trigger: CTTGGCCACTGAATTAGCCAAAACACTTAGGAAGAA...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR TCA 72 bp CTAAGTGTTTTGGCTAATTCAGTGGCCAAGAAACTATaGTGTTTATTCTCTGATTGGACAGAGTCAAGAAAC +
Preference number: 3 (lower is better)
Translates to: LSVLANSVAKKL*CLFSDWTESRN
Trigger: GTTTCTTGACTCTGTCCAATCAGAGAATAAACATCATAGTTTCTTGGCCACTGAATTAGCCAAAACACTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR TCA 72 bp TCTTACTTTGAGTGGAAAGTTGAACTACATGGTCTCTaGTACCCCTTCCAATGCTCAATCTTTACAATCATA +
Preference number: 3 (lower is better)
Translates to: SYFEWKVELHGL*YPFQCSIFTII
Trigger: TATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAACTTTCCACTCAAAGTAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACAGTTCTACATATTTGTaGTTGCAATCTTGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNSSTYL*LQSWAG
Trigger: TCCTGCCCAAGATTGCAACAACAAATATGTAGAACT...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACTTTGTTGTTGCAATCTaGGGCAGGAAAATCACTAAT +
Preference number: 3 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNFVVAI*GRKITN
Trigger: ATTAGTGATTTTCCTGCCCAAGATTGCAACAACAAA...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGTCTACATATTTGTTGTaGCAATCTTGGGCAGGAAAA +
Preference number: 3 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMSTYLL*QSWAGK
Trigger: TTTTCCTGCCCAAGATTGCAACAACAAATATGTAGA...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACTCTACATATTTGTTGTaGCAATCTTGGGCAGGAAAA +
Preference number: 3 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNSTYLL*QSWAGK
Trigger: TTTTCCTGCCCAAGATTGCAACAACAAATATGTAGA...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGTGTAGTTCTACATATTaGTTGTTGCAATCTTGGGCA +
Preference number: 3 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMCSSTY*LLQSWA
Trigger: TGCCCAAGATTGCAACAACAAATATGTAGAACTACA...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGTTTCAACTAGGGTGGTaGCATATTATCCTCTCTTTA +
Preference number: 3 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMFQLGW*HIILSL
Trigger: TAAAGAGAGGATAATATGCAACCACCCTAGTTGAAA...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR TCA 72 bp CAAAACAGATATAATTACCAAGGGATAAAGCTGATATaGCCCAGCAACAATCTGTCATTACTTCAGCTGTTA +
Preference number: 3 (lower is better)
Translates to: QNRYNYQGIKLI*PSNNLSLLQLL
Trigger: TAACAGCTGAAGTAATGACAGATTGTTGCTGGGTCATATCAGCTTTATCCCTTGGTAATTATATCTGTTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR TCA 72 bp TTCAAACTAGGCATTAAATTTAGGGTGAGAAAGAAGTaGTACACTCTGTTTCAACTAGGGTGGTTGCATATT +
Preference number: 3 (lower is better)
Translates to: FKLGIKFRVRKK*YTLFQLGWLHI
Trigger: AATATGCAACCACCCTAGTTGAAACAGAGTGTATCACTTCTTTCTCACCCTAAATTTAATGCCTAGTTTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR TCA 72 bp AGTGTATTTGTTTCCGTTGAAGTTGGATTTAATGTTTaGAAATTACCTAAACTCATCTGGACCAGTGGTATC +
Preference number: 3 (lower is better)
Translates to: SVFVSVEVGFNV*KLPKLIWTSGI
Trigger: GATACCACTGGTCCAGATGAGTTTAGGTAATTTTCAAACATTAAATCCAACTTCAACGGAAACAAATACACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTTCCGGGAAGCTCTCCTaGCGCCCAGGGCCCGCAACG +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPSGKLS*RPGPAT
Trigger: CGTTGCGGGCCCTGGGCGCCAGGAGAGCTTCCCGGA...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATGGCCCCTACGCCCCCTaGCTCCGAGCACCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNGPYAP*LRAPLR
Trigger: ACGCAGCGGTGCTCGGAGGCAGGGGGCGTAGGGGCC...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTCAGGGAGGCAGAGGTTaGAGTGAGCTGAGTTCACGC +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPQGGRG*SELSSR
Trigger: GCGTGAACTCAGCTCACTGCAACCTCTGCCTCCCTG...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACGCCTCCGAGCACCGCTaGGTCACGCGCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYASEHR*VTRRAT
Trigger: GGTGGCCCTGCGCGTGACGCAGCGGTGCTCGGAGGC...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACGGCCCCTACGCCCCCTaGCTCCGAGCACCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYGPYAP*LRAPLR
Trigger: ACGCAGCGGTGCTCGGAGGCAGGGGGCGTAGGGGCC...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTGAGGTTGCAGTGAGCTaGGTTCACGCCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPEVAVS*VHAIAL
Trigger: GAGTGCAATGGCGTGAACTCAGCTCACTGCAACCTC...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTGAGGCACGTTCTCTCTaGCAAATGAGTGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPEARSL*QMSGPS
Trigger: TGAAGGCCCACTCATTTGTCAGAGAGAACGTGCCTC...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATCAGGTCACAGGTCACTaGAGCCTCCATCTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNQVTGH*SLHLPA
Trigger: AGCCGGGAGATGGAGGCTTCAGTGACCTGTGACCTG...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACGCCTCCGAGCACCGCTaGGTCACGCGCAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNASEHR*VTRRAT
Trigger: GGTGGCCCTGCGCGTGACGCAGCGGTGCTCGGAGGC...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTTGGCAAAGTCTTGACTaGGGCTTCAGCTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPWQSLD*GFSSFP
Trigger: GGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTCCATTCCAAAGAACATaGAGAGCACGAAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPPFQRT*RARRAR
Trigger: CCGTGCTCTTCGTGCTCTTCATGTTCTTTGGAATGG...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCTCCATCTCCCGGCTTaGAGCCATCTTCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMLHLPA*SHLPTS
Trigger: TGAGGTGGGAAGATGGCTTCAAGCCGGGAGATGGAG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACTCCGGGAAGCTCTCCTaGCGCCCAGGGCCCGCAACG +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNSGKLS*RPGPAT
Trigger: CGTTGCGGGCCCTGGGCGCCAGGAGAGCTTCCCGGA...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGTCCGGGAAGCTCTCCTaGCGCCCAGGGCCCGCAACG +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMSGKLS*RPGPAT
Trigger: CGTTGCGGGCCCTGGGCGCCAGGAGAGCTTCCCGGA...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATGAGGTTGCAGTGAGCTaGGTTCACGCCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNEVAVS*VHAIAL
Trigger: GAGTGCAATGGCGTGAACTCAGCTCACTGCAACCTC...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGAGGCAGAGGTTGCAGTaGGCTGAGTTCACGCCATTG +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMRQRLQ*AEFTPL
Trigger: CAATGGCGTGAACTCAGCTCACTGCAACCTCTGCCT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATGGCAGGAGAATAGCTTaGACCAGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCTGGTTCAAGCTATTCTCCTGCC...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTCTCCAGAGCACTATTTaGGTCCAGGAGTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPLQSTI*VQEFET
Trigger: AGTCTCAAACTCCTGGACTCAAATAGTGCTCTGGAG...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTAGTGGGAGTTTTGCTTaGGGTGAAGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPSGSFA*GEEFET
Trigger: GGTCTCAAACTCTTCACCTCAAGCAAAACTCCCACT...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTCAGGTCACAGGTCACTaGAGCCTCCATCTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLQVTGH*SLHLPA
Trigger: AGCCGGGAGATGGAGGCTTCAGTGACCTGTGACCTG...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTTTACAGTGGGATTCCTaGGATAGCTGTCACGGTAGA +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPLQWDS*DSCHGR
Trigger: TCTACCGTGACAGCTATCCCAGGAATCCCACTGTAA...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATTTTGGGAGGCTGAGGTaGGCAGATCACAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNFGRLR*ADHKVR
Trigger: CCTGACCTTGTGATCTGCCCACCTCAGCCTCCCAAA...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACCACCATTGTATTGTCTaGGGCCCGCGCCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNHHCIV*GPRPAA
Trigger: CGCTGCCGGGCGCGGGCCTCAGACAATACAATGGTG...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367619.8
ENST00000540564.5
CDS-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCATAAGACAGGAGGCTaGACTCAAGCACCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMHKTGG*TQAPAF
Trigger: GAAGGCTGGTGCTTGAGTTCAGCCTCCTGTCTTATG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCTCCAGCCTGGTGACTaGGACTCCGTCTCAAAACAA +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMLQPGD*DSVSKQ
Trigger: TTGTTTTGAGACGGAGTCTCAGTCACCAGGCTGGAG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATCTCCAGCCTGGTGACTaGGACTCCGTCTCAAAACAA +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNLQPGD*DSVSKQ
Trigger: TTGTTTTGAGACGGAGTCTCAGTCACCAGGCTGGAG...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTCTCCATCTCCCGGCTTaGAGCCATCTTCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLLHLPA*SHLPTS
Trigger: TGAGGTGGGAAGATGGCTTCAAGCCGGGAGATGGAG...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGTATGTCAATTCGACCTaGGGCCCGCGCCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMYVNST*GPRPAA
Trigger: CGCTGCCGGGCGCGGGCCTCAGGTCGAATTGACATA...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539888.5
CDS-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTATAATAGTTGGAGTATaGCGTGGAGTTCCACCAATC +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPIIVGV*RGVPPI
Trigger: GATTGGTGGAACTCCACGTCATACTCCAACTATTAT...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTACATGGCAGCAGATTTaGATCTCTTGGAGAAAAACC +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPTWQQI*ISWRKT
Trigger: GGTTTTTCTCCAAGAGATTCAAATCTGCTGCCATGT...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCCATTCCAAAGAACATaGAGAGCACGAAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMPFQRT*RARRAR
Trigger: CCGTGCTCTTCGTGCTCTTCATGTTCTTTGGAATGG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATGACCTAGGAATGGAGTaGGTCATCTGTAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNDLGME*VICKAW
Trigger: CCAGGCTTTACAGATGACTCACTCCATTCCTAGGTC...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTGAGGTTGCAGTGAGCTaGGTTCACGCCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLEVAVS*VHAIAL
Trigger: GAGTGCAATGGCGTGAACTCAGCTCACTGCAACCTC...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTGGCAGGAGAATAGCTTaGACCAGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCTGGTTCAAGCTATTCTCCTGCC...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTTGTTGCCCATGGCTCTaGAATGGAGGGAACTGGGAC +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLCCPWL*NGGNWD
Trigger: GTCCCAGTTCCCTCCATTTCAGAGCCATGGGCAACA...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTTGGCTTCAATTCCTCTaGCTCTGCTGTCAACTTTAT +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPWLQFL*LCCQLY
Trigger: ATAAAGTTGACAGCAGAGGCAGAGGAATTGAAGCCA...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367619.8
ENST00000539888.5
CDS-3UTR GCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATGCGGATGAGAACTCTTaGTATAGCCAGTGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNADENS*YSQWPN
Trigger: ATTGGGCCACTGGCTATAGCAAGAGTTCTCATCCGC...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTGCAACCAAAGACCTGTaGAAACTTCATAGCGACATA +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPATKDL*KLHSDI
Trigger: TATGTCGCTATGAAGTTTGCACAGGTCTTTGGTTGC...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATCCTCAGGATTTTCCCTaGACTTTGACAGCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNPQDFP*TLTAGF
Trigger: GAAACCGGCTGTCAAAGTCCAGGGAAAATCCTGAGG...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367619.8
ENST00000540564.5
CDS-3UTR CCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTTCTTGCTATAGCCAGTaGCCCAATGTTGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPSCYSQ*PNVETE
Trigger: TTCTGTTTCAACATTGGGCCACTGGCTATAGCAAGA...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTTTTGGGAGGCTGAGGTaGGCAGATCACAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLFGRLR*ADHKVR
Trigger: CCTGACCTTGTGATCTGCCCACCTCAGCCTCCCAAA...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATCTATGTTGCCCAGGCTaGTCTCAAACTTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNLCCPG*SQTSEL
Trigger: GAGCTCAGAAGTTTGAGACCAGCCTGGGCAACATAG...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCTATGTTGCCCAGGCTaGTCTCAAACTTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMLCCPG*SQTSEL
Trigger: GAGCTCAGAAGTTTGAGACCAGCCTGGGCAACATAG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATCTGCATTACCCCAAATaGCAAAGTCTTGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNLHYPK*QSLDWG
Trigger: GCCCCAGTCAAGACTTTGCCATTTGGGGTAATGCAG...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGGAACAGAAAAGGTTGTaGGAGCGCACCCACCATTAT +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMEQKRL*ERTHHY
Trigger: ATAATGGTGGGTGCGCTCTCACAACCTTTTCTGTTC...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTCATAAGACAGGAGGCTaGACTCAAGCACCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLHKTGG*TQAPAF
Trigger: GAAGGCTGGTGCTTGAGTTCAGCCTCCTGTCTTATG...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTGAGGCACGTTCTCTCTaGCAAATGAGTGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLEARSL*QMSGPS
Trigger: TGAAGGCCCACTCATTTGTCAGAGAGAACGTGCCTC...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATCAGTTTGGCTTCAAGTaGCCTAGGAATGGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNQFGFK*PRNGVS
Trigger: ACTCACTCCATTCCTAGGTCACTTGAAGCCAAACTG...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTGTGGCCAAGAAACTATaGTGTTTATTCTCTGATTGG +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPVAKKL*CLFSDW
Trigger: CCAATCAGAGAATAAACATCATAGTTTCTTGGCCAC...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTGCTTCACAGAAATCATaGCCTATAGAGAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPASQKS*PIEKTR
Trigger: CCTTGTTTTCTCTATAGGTCATGATTTCTGTGAAGC...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTCTCCAGCCTGGTGACTaGGACTCCGTCTCAAAACAA +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLLQPGD*DSVSKQ
Trigger: TTGTTTTGAGACGGAGTCTCAGTCACCAGGCTGGAG...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACCAGGTCACAGGTCACTaGAGCCTCCATCTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNQVTGH*SLHLPA
Trigger: AGCCGGGAGATGGAGGCTTCAGTGACCTGTGACCTG...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGACAGACACAGGAATCTaGTGCATTACCCCAAATGGC +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMTDTGI*CITPNG
Trigger: GCCATTTGGGGTAATGCAGCAGATTCCTGTGTCTGT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATTTACAGTGGGATTCCTaGGATAGCTGTCACGGTAGA +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNLQWDS*DSCHGR
Trigger: TCTACCGTGACAGCTATCCCAGGAATCCCACTGTAA...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTACAAAATCATCAAAGTaGCTGCCAACTTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPTKSSK*LPTSFI
Trigger: TATGAAGGAAGTTGGCAGTCACTTTGATGATTTTGT...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACCATAAGACAGGAGGCTaGACTCAAGCACCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYHKTGG*TQAPAF
Trigger: GAAGGCTGGTGCTTGAGTTCAGCCTCCTGTCTTATG...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATCTACCCAATCTTCAGTaGCAAGGAGGAAACAAAGTC +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNLPNLQ*QGGNKV
Trigger: GACTTTGTTTCCTCCTTGTCACTGAAGATTGGGTAG...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCTACCCAATCTTCAGTaGCAAGGAGGAAACAAAGTC +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMLPNLQ*QGGNKV
Trigger: GACTTTGTTTCCTCCTTGTCACTGAAGATTGGGTAG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTGACCTAGGAATGGAGTaGGTCATCTGTAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLDLGME*VICKAW
Trigger: CCAGGCTTTACAGATGACTCACTCCATTCCTAGGTC...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGTGTACAAGACTCCAGTaGACTTCCAACAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMCTRLQ*TSNSLA
Trigger: AGCCAAACTGTTGGAAGTTCACTGGAGTCTTGTACA...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATAGGCAGAGGTTGCAGTaGGCTGAGTTCACGCCATTG +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNRQRLQ*AEFTPL
Trigger: CAATGGCGTGAACTCAGCTCACTGCAACCTCTGCCT...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACCTCCATCTCCCGGCTTaGAGCCATCTTCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNLHLPA*SHLPTS
Trigger: TGAGGTGGGAAGATGGCTTCAAGCCGGGAGATGGAG...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTGCGGATGAGAACTCTTaGTATAGCCAGTGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLADENS*YSQWPN
Trigger: ATTGGGCCACTGGCTATAGCAAGAGTTCTCATCCGC...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCAGGGAGGCAGAGGTTaGAGTGAGCTGAGTTCACGC +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMQGGRG*SELSSR
Trigger: GCGTGAACTCAGCTCACTGCAACCTCTGCCTCCCTG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATTTTGCAGGGTTTCTCTaGTCTTCATCTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNFAGFL*SSSSSG
Trigger: TCCTGAGGAAGATGAAGACCAGAGAAACCCTGCAAA...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367619.8
ENST00000540564.5
CDS-3UTR CCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGTTTGCAGGGTTTCTCTaGTCTTCATCTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMFAGFL*SSSSSG
Trigger: TCCTGAGGAAGATGAAGACCAGAGAAACCCTGCAAA...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367619.8
ENST00000540564.5
CDS-3UTR CCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGACAAGTCCAGGAACGTaGCCGGACATAATCCAAAAA +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMTSPGT*PDIIQK
Trigger: TTTTTGGATTATGTCCGGCCACGTTCCTGGACTTGT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATACAAGTCCAGGAACGTaGCCGGACATAATCCAAAAA +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNTSPGT*PDIIQK
Trigger: TTTTTGGATTATGTCCGGCCACGTTCCTGGACTTGT...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATAGAGAGCCTCTCAAGTaGCTGTTCCAAGTAACAACT +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNREPLK*LFQVTT
Trigger: AGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCT...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATAAAATTAGCTGGACATaGTGGCAGGCACCTGTAATG +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNKISWT*WQAPVM
Trigger: CATTACAGGTGCCTGCCACCATGTCCAGCTAATTTT...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTTTCCCAATCCAAAATTaGCACCTTTTTCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPFPIQN*HLFPWK
Trigger: TTTCCATGGAAAAAGGTGCCAATTTTGGATTGGGAA...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACGGCAGGAGAATAGCTTaGACCAGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCTGGTTCAAGCTATTCTCCTGCC...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATTCTTGCTATAGCCAGTaGCCCAATGTTGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNSCYSQ*PNVETE
Trigger: TTCTGTTTCAACATTGGGCCACTGGCTATAGCAAGA...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATGAGAATCAGCACACCTaGCAAGATGGAGTTAAATAC +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNENQHT*QDGVKY
Trigger: GTATTTAACTCCATCTTGCCAGGTGTGCTGATTCTC...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACAAAATTAGCCAGGCGTaGCCCTGTAATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYKISQA*PCNPSY
Trigger: GTAGCTGGGATTACAGGGCCACGCCTGGCTAATTTT...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACTTTGGGAGGCTGAGGTaGGCAGATCACAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNFGRLR*ADHKVR
Trigger: CCTGACCTTGTGATCTGCCCACCTCAGCCTCCCAAA...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATTGGCAAAGTCTTGACTaGGGCTTCAGCTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNWQSLD*GFSSFP
Trigger: GGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGTGTGATATATTGTTCTaGTGTGGTCCACTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMCDILF*CGPLQA
Trigger: TGCTTGAAGTGGACCACATCAGAACAATATATCACA...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACGAGGCACGTTCTCTCTaGCAAATGAGTGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNEARSL*QMSGPS
Trigger: TGAAGGCCCACTCATTTGTCAGAGAGAACGTGCCTC...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATCCATTCCAAAGAACATaGAGAGCACGAAGAGCACGG +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNPFQRT*RARRAR
Trigger: CCGTGCTCTTCGTGCTCTTCATGTTCTTTGGAATGG...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATGTGGCCAAGAAACTATaGTGTTTATTCTCTGATTGG +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNVAKKL*CLFSDW
Trigger: CCAATCAGAGAATAAACATCATAGTTTCTTGGCCAC...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACCTCCAGAGCACTATTTaGGTCCAGGAGTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYLQSTI*VQEFET
Trigger: AGTCTCAAACTCCTGGACTCAAATAGTGCTCTGGAG...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGAGGGTGAGAAAGAAGTaGTACACTCTGTTTCAACTA +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMRVRKK*YTLFQL
Trigger: TAGTTGAAACAGAGTGTATCACTTCTTTCTCACCCT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCAATTCCTCTGCCTCTaGTGTCAACTTTATCTTCTT +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMQFLCL*CQLYLL
Trigger: AAGAAGATAAAGTTGACAGCAGAGGCAGAGGAATTG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367619.8
ENST00000539888.5
CDS-3UTR GCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACTCCTTGTTCTGGAGGTaGTCTCAAATCCTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYSLFWR*SQILRS
Trigger: AGAGCGAAGGATTTGAGAGCACCTCCAGAACAAGGA...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATGCGGATGAGAACTCTTaGTATAGCCAGTGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNADENS*YSQWPN
Trigger: ATTGGGCCACTGGCTATAGCAAGAGTTCTCATCCGC...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATAATCTTTCCTTGTTCTaGAGGTGCTCTCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNNLSLF*RCSQIL
Trigger: AAGGATTTGAGAGCACCTCCAGAACAAGGAAAGATT...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACTTACAGTGGGATTCCTaGGATAGCTGTCACGGTAGA +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYLQWDS*DSCHGR
Trigger: TCTACCGTGACAGCTATCCCAGGAATCCCACTGTAA...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGAGGTTCTATAATAGTTaGAGTATGACGTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMRFYNS*SMTWSS
Trigger: GGAACTCCACGTCATACTCCAACTATTATAGAACCT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATAGGTTCTATAATAGTTaGAGTATGACGTGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNRFYNS*SMTWSS
Trigger: GGAACTCCACGTCATACTCCAACTATTATAGAACCT...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGAACTTCAGTAACAACTaGAAACAGCTGGCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMNFSNN*KQLAPN
Trigger: ATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATCTAGATTCAAAAGATTaGCTTGCTCATAACCAGGTC +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNLDSKD*LAHNQV
Trigger: GACCTGGTTATGAGCAAGCCAATCTTTTGAATCTAG...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATAAAATTAGCCAGGCGTaGCCCTGTAATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNKISQA*PCNPSY
Trigger: GTAGCTGGGATTACAGGGCCACGCCTGGCTAATTTT...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGTGGCACCTTTTTCCATaGAAATTCAAACTGCATCTC +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMWHLFP*KFKLHL
Trigger: GAGATGCAGTTTGAATTTCCATGGAAAAAGGTGCCA...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGAGGGCAATAAACATGTaGTATATTGTTCTGATGTGG +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMRAINM*YIVLMW
Trigger: CCACATCAGAACAATATATCACATGTTTATTGCCCT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTATAATAGTTGGAGTATaGCGTGGAGTTCCACCAATC +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLIIVGV*RGVPPI
Trigger: GATTGGTGGAACTCCACGTCATACTCCAACTATTAT...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTACATGGCAGCAGATTTaGATCTCTTGGAGAAAAACC +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLTWQQI*ISWRKT
Trigger: GGTTTTTCTCCAAGAGATTCAAATCTGCTGCCATGT...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACGGGATAAAGCTGATATaGCCCAGCAACAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYGIKLI*PSNNLS
Trigger: TGACAGATTGTTGCTGGGTCATATCAGCTTTATCCC...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGAAAGTGACCATTCCTTaGAGTGCTACTGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMKVTIP*SATVFE
Trigger: TTCAAAAACAGTAGCACTTCAAGGAATGGTCACTTT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATAGTGGGAGTTTTGCTTaGGGTGAAGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNSGSFA*GEEFET
Trigger: GGTCTCAAACTCTTCACCTCAAGCAAAACTCCCACT...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTGCAACCAAAGACCTGTaGAAACTTCATAGCGACATA +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLATKDL*KLHSDI
Trigger: TATGTCGCTATGAAGTTTGCACAGGTCTTTGGTTGC...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATATTACAATACTGTTGTaGAGAACATTACTGCGGGAA +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNITILL*RTLLRE
Trigger: TTCCCGCAGTAATGTTCTGCACAACAGTATTGTAAT...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACCCTCAGGATTTTCCCTaGACTTTGACAGCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNPQDFP*TLTAGF
Trigger: GAAACCGGCTGTCAAAGTCCAGGGAAAATCCTGAGG...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367619.8
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATCCTAGAACTCCAATCTaGAAGATCATGAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNPRTPI*KIMKRK
Trigger: CTTTCTTTTCATGATCTTCCAGATTGGAGTTCTAGG...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTTTACCTAAACTCATCTaGACCAGTGGTATCGTGAGT +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLLPKLI*TSGIVS
Trigger: ACTCACGATACCACTGGTCCAGATGAGTTTAGGTAA...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACAAAATTAGCTGGACATaGTGGCAGGCACCTGTAATG +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYKISWT*WQAPVM
Trigger: CATTACAGGTGCCTGCCACCATGTCCAGCTAATTTT...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATTTCCCAATCCAAAATTaGCACCTTTTTCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNFPIQN*HLFPWK
Trigger: TTTCCATGGAAAAAGGTGCCAATTTTGGATTGGGAA...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCTGCATTACCCCAAATaGCAAAGTCTTGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMLHYPK*QSLDWG
Trigger: GCCCCAGTCAAGACTTTGCCATTTGGGGTAATGCAG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACCTGCATTACCCCAAATaGCAAAGTCTTGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNLHYPK*QSLDWG
Trigger: GCCCCAGTCAAGACTTTGCCATTTGGGGTAATGCAG...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACGTTCTCTCTGACAAATaGGTGGGCCTTCATTACAAA +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYVLSDK*VGLHYK
Trigger: TTTGTAATGAAGGCCCACTCATTTGTCAGAGAGAAC...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCAGTTTGGCTTCAAGTaGCCTAGGAATGGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMQFGFK*PRNGVS
Trigger: ACTCACTCCATTCCTAGGTCACTTGAAGCCAAACTG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATGGGATAAAGCTGATATaGCCCAGCAACAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNGIKLI*PSNNLS
Trigger: TGACAGATTGTTGCTGGGTCATATCAGCTTTATCCC...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACCTCCAGAGCACTATTTaGGTCCAGGAGTTTGAGACT +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNLQSTI*VQEFET
Trigger: AGTCTCAAACTCCTGGACTCAAATAGTGCTCTGGAG...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACAGTGGGAGTTTTGCTTaGGGTGAAGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNSGSFA*GEEFET
Trigger: GGTCTCAAACTCTTCACCTCAAGCAAAACTCCCACT...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACAGGACAGTGCTGACGTaGATACCATTCTTGAGAATA +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYRTVLT*IPFLRI
Trigger: TATTCTCAAGAATGGTATGCACGTCAGCACTGTCCT...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGTGTGCAGAACATTACTaGGGGAACATGCAGAGTACC +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMCAEHY*GNMQST
Trigger: GGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACA...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGACAGACACAGGAATCTaGTGCATTACCCCAAATGGC +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMTDTGI*CITPNG
Trigger: GCCATTTGGGGTAATGCAGCAGATTCCTGTGTCTGT...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACATGAAAAGAAAGCCATaGAAGAGAGAACGGATCAGC +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYMKRKP*KRERIS
Trigger: GCTGATCCGTTCTCTCTTCCATGGCTTTCTTTTCAT...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACGAGAATCAGCACACCTaGCAAGATGGAGTTAAATAC +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYENQHT*QDGVKY
Trigger: GTATTTAACTCCATCTTGCCAGGTGTGCTGATTCTC...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGTTGTTGTTGCAATCTTaGGCAGGAAAATCACTAATA +
Preference number: 4 (lower is better)
Translates to: NTHTGKIQTQESAALPQMLLLQS*AGKSLI
Trigger: TATTAGTGATTTTCCTGCCCAAGATTGCAACAACAA...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTCTGTTTCAACTAGGGTaGTTGCATATTATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLLFQLG*LHIILS
Trigger: AGAGAGGATAATATGCAACCACCCTAGTTGAAACAG...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTAGGGCAATAAACATGTaGTATATTGTTCTGATGTGG +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLRAINM*YIVLMW
Trigger: CCACATCAGAACAATATATCACATGTTTATTGCCCT...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATATAATAGTTGGAGTATaGCGTGGAGTTCCACCAATC +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNIIVGV*RGVPPI
Trigger: GATTGGTGGAACTCCACGTCATACTCCAACTATTAT...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATACATGGCAGCAGATTTaGATCTCTTGGAGAAAAACC +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNTWQQI*ISWRKT
Trigger: GGTTTTTCTCCAAGAGATTCAAATCTGCTGCCATGT...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTAAAGTGACCATTCCTTaGAGTGCTACTGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLKVTIP*SATVFE
Trigger: TTCAAAAACAGTAGCACTTCAAGGAATGGTCACTTT...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACTCCATTAGGGCTTATTaGCAGCAGAAATGTGAATGT +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYSIRAY*QQKCEC
Trigger: ACATTCACATTTCTGCTGTCAATAAGCCCTAATGGA...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATAGGACAGTGCTGACGTaGATACCATTCTTGAGAATA +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNRTVLT*IPFLRI
Trigger: TATTCTCAAGAATGGTATGCACGTCAGCACTGTCCT...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGGACACAGGAATCTGCTaGATTACCCCAAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMDTGIC*ITPNGK
Trigger: TTTGCCATTTGGGGTAATGCAGCAGATTCCTGTGTC...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACGACACAGGAATCTGCTaGATTACCCCAAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNDTGIC*ITPNGK
Trigger: TTTGCCATTTGGGGTAATGCAGCAGATTCCTGTGTC...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTAAATCCTTCGCTCTATaGTTGTTTTTCTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLKSFAL*LFFSPS
Trigger: TGAAGGAGAGAAAAACAACCATAGAGCGAAGGATTT...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACAATCTTTCCTTGTTCTaGAGGTGCTCTCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYNLSLF*RCSQIL
Trigger: AAGGATTTGAGAGCACCTCCAGAACAAGGAAAGATT...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTTATATTGTTCTGATGTaGTCCACTTCAAGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLYIVLM*STSSSS
Trigger: TGAACTGCTTGAAGTGGACCACATCAGAACAATATA...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATTTACCTAAACTCATCTaGACCAGTGGTATCGTGAGT +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNLPKLI*TSGIVS
Trigger: ACTCACGATACCACTGGTCCAGATGAGTTTAGGTAA...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATGTGCTCAGAACACTATaGATTAACACACACACTGGA +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNVLRTL*INTHTG
Trigger: TCCAGTGTGTGTGTTAATCCATAGTGTTCTGAGCAC...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
3UTR CAA 72 bp TTAGCAGGTTATGATTCCATTACAATTACAATACTGTaGTGCAGAACATTACTGCGGGAACATGCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LAGYDSITITIL*CRTLLREHAEY
Trigger: GTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGTAATGGAATCATAACCTGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGGTTCTCTCTGACAAATaGGTGGGCCTTCATTACAAA +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMVLSDK*VGLHYK
Trigger: TTTGTAATGAAGGCCCACTCATTTGTCAGAGAGAAC...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACGTTCTCTCTGACAAATaGGTGGGCCTTCATTACAAA +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNVLSDK*VGLHYK
Trigger: TTTGTAATGAAGGCCCACTCATTTGTCAGAGAGAAC...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACGCATTAAATTTAGGGTaGGAAAGAAGTGATACACTC +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYALNLG*ERSDTL
Trigger: GAGTGTATCACTTCTTTCTCACCCTAAATTTAATGC...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATTCCATTAGGGCTTATTaGCAGCAGAAATGTGAATGT +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNSIRAY*QQKCEC
Trigger: ACATTCACATTTCTGCTGTCAATAAGCCCTAATGGA...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACAACTTCAGATTTACATaGCCCTTCTGGTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNNFRFT*PFWCSE
Trigger: TTCTGAGCACCAGAAGGGTCATGTAAATCTGAAGTT...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGAACTTCAGATTTACATaGCCCTTCTGGTGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMNFRFT*PFWCSE
Trigger: TTCTGAGCACCAGAAGGGTCATGTAAATCTGAAGTT...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGTGGCTTCAATTCCTCTaGCTCTGCTGTCAACTTTAT +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMWLQFL*LCCQLY
Trigger: ATAAAGTTGACAGCAGAGGCAGAGGAATTGAAGCCA...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367619.8
ENST00000539888.5
CDS-3UTR GCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGGCAACCAAAGACCTGTaGAAACTTCATAGCGACATA +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMATKDL*KLHSDI
Trigger: TATGTCGCTATGAAGTTTGCACAGGTCTTTGGTTGC...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACAGGACAGTGCTGACGTaGATACCATTCTTGAGAATA +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNRTVLT*IPFLRI
Trigger: TATTCTCAAGAATGGTATGCACGTCAGCACTGTCCT...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATAATCTTTCCTTGTTCTaGAGGTGCTCTCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNNLSLF*RCSQIL
Trigger: AAGGATTTGAGAGCACCTCCAGAACAAGGAAAGATT...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGTCTTGCTATAGCCAGTaGCCCAATGTTGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMSCYSQ*PNVETE
Trigger: TTCTGTTTCAACATTGGGCCACTGGCTATAGCAAGA...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACATGAAAAGAAAGCCATaGAAGAGAGAACGGATCAGC +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNMKRKP*KRERIS
Trigger: GCTGATCCGTTCTCTCTTCCATGGCTTTCTTTTCAT...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGATGAAAAGAAAGCCATaGAAGAGAGAACGGATCAGC +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMMKRKP*KRERIS
Trigger: GCTGATCCGTTCTCTCTTCCATGGCTTTCTTTTCAT...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATTCTCTGACAAATGAGTaGGCCTTCATTACAAAACGA +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNSLTNE*AFITKR
Trigger: TCGTTTTGTAATGAAGGCCCACTCATTTGTCAGAGA...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGGAGAATCAGCACACCTaGCAAGATGGAGTTAAATAC +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMENQHT*QDGVKY
Trigger: GTATTTAACTCCATCTTGCCAGGTGTGCTGATTCTC...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTCATAATCCAAAAATGTaGGATTTTTCAGAGGACAGT +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLHNPKM*DFSEDS
Trigger: ACTGTCCTCTGAAAAATCCCACATTTTTGGATTATG...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATAACTTCAGTAACAACTaGAAACAGCTGGCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNNFSNN*KQLAPN
Trigger: ATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTT...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACGTCATCTGTAAAGCCTaGAGTGGTCCAAATAACACA +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNVICKA*SGPNNT
Trigger: TGTGTTATTTGGACCACTCCAGGCTTTACAGATGAC...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTTTGTTGTTGCAATCTTaGGCAGGAAAATCACTAATA +
Preference number: 4 (lower is better)
Translates to: TITILLCRTLLREHAEYLLLLQS*AGKSLI
Trigger: TATTAGTGATTTTCCTGCCCAAGATTGCAACAACAA...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATTGGCACCTTTTTCCATaGAAATTCAAACTGCATCTC +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNWHLFP*KFKLHL
Trigger: GAGATGCAGTTTGAATTTCCATGGAAAAAGGTGCCA...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACGTGCTCAGAACACTATaGATTAACACACACACTGGA +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNVLRTL*INTHTG
Trigger: TCCAGTGTGTGTGTTAATCCATAGTGTTCTGAGCAC...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGGTGCTCAGAACACTATaGATTAACACACACACTGGA +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMVLRTL*INTHTG
Trigger: TCCAGTGTGTGTGTTAATCCATAGTGTTCTGAGCAC...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGTGTGATATATTGTTCTaGTGTGGTCCACTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMCDILF*CGPLQA
Trigger: TGCTTGAAGTGGACCACATCAGAACAATATATCACA...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGAGGGTGAGAAAGAAGTaGTACACTCTGTTTCAACTA +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMRVRKK*YTLFQL
Trigger: TAGTTGAAACAGAGTGTATCACTTCTTTCTCACCCT...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACTCCATTAGGGCTTATTaGCAGCAGAAATGTGAATGT +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNSIRAY*QQKCEC
Trigger: ACATTCACATTTCTGCTGTCAATAAGCCCTAATGGA...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR GCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCAATTCCTCTGCCTCTaGTGTCAACTTTATCTTCTT +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMQFLCL*CQLYLL
Trigger: AAGAAGATAAAGTTGACAGCAGAGGCAGAGGAATTG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367619.8
ENST00000539888.5
CDS-3UTR GCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATATTACAATACTGTTGTaGAGAACATTACTGCGGGAA +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNITILL*RTLLRE
Trigger: TTCCCGCAGTAATGTTCTGCACAACAGTATTGTAAT...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATAAATCCTTCGCTCTATaGTTGTTTTTCTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNKSFAL*LFFSPS
Trigger: TGAAGGAGAGAAAAACAACCATAGAGCGAAGGATTT...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATTATATTGTTCTGATGTaGTCCACTTCAAGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNYIVLM*STSSSS
Trigger: TGAACTGCTTGAAGTGGACCACATCAGAACAATATA...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACTCTCTGACAAATGAGTaGGCCTTCATTACAAAACGA +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNSLTNE*AFITKR
Trigger: TCGTTTTGTAATGAAGGCCCACTCATTTGTCAGAGA...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACCATAATCCAAAAATGTaGGATTTTTCAGAGGACAGT +
Preference number: 4 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYHNPKM*DFSEDS
Trigger: ACTGTCCTCTGAAAAATCCCACATTTTTGGATTATG...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCTAGATTCAAAAGATTaGCTTGCTCATAACCAGGTC +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMLDSKD*LAHNQV
Trigger: GACCTGGTTATGAGCAAGCCAATCTTTTGAATCTAG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACCTGTTTCAACTAGGGTaGTTGCATATTATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNLFQLG*LHIILS
Trigger: AGAGAGGATAATATGCAACCACCCTAGTTGAAACAG...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGTGGCACCTTTTTCCATaGAAATTCAAACTGCATCTC +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMWHLFP*KFKLHL
Trigger: GAGATGCAGTTTGAATTTCCATGGAAAAAGGTGCCA...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGACAAAATCATCAAAGTaGCTGCCAACTTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMTKSSK*LPTSFI
Trigger: TATGAAGGAAGTTGGCAGTCACTTTGATGATTTTGT...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACACAAAATCATCAAAGTaGCTGCCAACTTCCTTCATA +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNTKSSK*LPTSFI
Trigger: TATGAAGGAAGTTGGCAGTCACTTTGATGATTTTGT...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACAGGGCAATAAACATGTaGTATATTGTTCTGATGTGG +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNRAINM*YIVLMW
Trigger: CCACATCAGAACAATATATCACATGTTTATTGCCCT...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR TCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGAAAGTGACCATTCCTTaGAGTGCTACTGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMKVTIP*SATVFE
Trigger: TTCAAAAACAGTAGCACTTCAAGGAATGGTCACTTT...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGAAATCCTTCGCTCTATaGTTGTTTTTCTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMKSFAL*LFFSPS
Trigger: TGAAGGAGAGAAAAACAACCATAGAGCGAAGGATTT...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACCCTAGAACTCCAATCTaGAAGATCATGAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNPRTPI*KIMKRK
Trigger: CTTTCTTTTCATGATCTTCCAGATTGGAGTTCTAGG...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CCA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCCTAGAACTCCAATCTaGAAGATCATGAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMPRTPI*KIMKRK
Trigger: CTTTCTTTTCATGATCTTCCAGATTGGAGTTCTAGG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS CCA 90 bp GGTCACAGAGCAGCCAGCAGGAAGGTCGACTCCGGGAAGCTCTCCTaGCGCCCAGGGCCCGCAACGTCGCCTGCTAAGCTAAAGCGCCGG +
Preference number: 5 (lower is better)
Translates to: GHRAASRKVDSGKLS*RPGPATSPAKLKRR
Trigger: CCGGCGCTTTAGCTTAGCAGGCGACGTTGCGGGCCCTGGGCGCCAGGAGAGCTTCCCGGAGTCGACCTTCCTGCTGGCTGCTCTGTGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539888.5
ENST00000540564.5
CDS CCA 90 bp CGACCATTACTAGGTGTCTCTAGGGACTCCTTTGCAGGGTTTCTCTaGTCTTCATCTTCCTCAGGATTTTCCCTGGACTTTGACAGCCGG +
Preference number: 5 (lower is better)
Translates to: RPLLGVSRDSFAGFL*SSSSSGFSLDFDSR
Trigger: CCGGCTGTCAAAGTCCAGGGAAAATCCTGAGGAAGATGAAGACCAGAGAAACCCTGCAAAGGAGTCCCTAGAGACACCTAGTAATGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367619.8
ENST00000426956.1
CDS-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCCTCCATCTCCCGGCTaGAAGCCATCTTCCCACCTC +
Preference number: 5 (lower is better)
Translates to: NTHTGKIQTQESAALPQMPPSPG*KPSSHL
Trigger: GAGGTGGGAAGATGGCTTCAAGCCGGGAGATGGAGG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS CCA 90 bp ATTCCATTACTAGGTGTCTCTAGGGACTCCTTTGCAGGGTTTCTCTaGTCTTCATCTTCCTCAGGATTTTCCCTGGACTTTGACAGCCGG +
Preference number: 5 (lower is better)
Translates to: IPLLGVSRDSFAGFL*SSSSSGFSLDFDSR
Trigger: CCGGCTGTCAAAGTCCAGGGAAAATCCTGAGGAAGATGAAGACCAGAGAAACCCTGCAAAGGAGTCCCTAGAGACACCTAGTAATGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540564.5
CDS CCA 90 bp CCTTTGCAGGGTTTCTCTGGTCTTCATCTTCCTCAGGATTTTCCCTaGACTTTGACAGCCGGTTTCTTAGAGACATCTTCTCTTCACCCA +
Preference number: 5 (lower is better)
Translates to: PLQGFSGLHLPQDFP*TLTAGFLETSSLHP
Trigger: TGGGTGAAGAGAAGATGTCTCTAAGAAACCGGCTGTCAAAGTCCAGGGAAAATCCTGAGGAAGATGAAGACCAGAGAAACCCTGCAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000426956.1
ENST00000540564.5
CDS-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCCAAATGGCAAAGTCTaGACTGGGGCTTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: NTHTGKIQTQESAALPQMPNGKV*TGASAP
Trigger: AGGAGCTGAAGCCCCAGTCAAGACTTTGCCATTTGG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATCCAAATGGCAAAGTCTaGACTGGGGCTTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNPNGKV*TGASAP
Trigger: AGGAGCTGAAGCCCCAGTCAAGACTTTGCCATTTGG...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS TCA 90 bp ACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATCTTCAGTaGCAAGGAGGAAACAAAGTCCAAGCTTCTAAAACACGTAACGAC +
Preference number: 5 (lower is better)
Translates to: TGNSWLQIRELPNLQ*QGGNKVQASKTRND
Trigger: GTCGTTACGTGTTTTAGAAGCTTGGACTTTGTTTCCTCCTTGTCACTGAAGATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCTGAAGGGCTCCTGTTaGATATTCCGAAACAAGGGG +
Preference number: 5 (lower is better)
Translates to: NTHTGKIQTQESAALPQMLKGSC*IFRNKG
Trigger: CCCCTTGTTTCGGAATATCAAACAGGAGCCCTTCAG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATGCCAGTGGCCCAATGTaGAAACAGAAAATAGGGAAC +
Preference number: 5 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNASGPM*KQKIGN
Trigger: GTTCCCTATTTTCTGTTTCAACATTGGGCCACTGGC...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTCTAACACAACATATGTaGGTCCAAAACCTAGAACTC +
Preference number: 5 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPLTQHM*VQNLEL
Trigger: GAGTTCTAGGTTTTGGACCAACATATGTTGTGTTAG...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACCCTCCATCTCCCGGCTaGAAGCCATCTTCCCACCTC +
Preference number: 5 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNPPSPG*KPSSHL
Trigger: GAGGTGGGAAGATGGCTTCAAGCCGGGAGATGGAGG...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCCTCCATCTCCCGGCTaGAAGCCATCTTCCCACCTC +
Preference number: 5 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMPPSPG*KPSSHL
Trigger: GAGGTGGGAAGATGGCTTCAAGCCGGGAGATGGAGG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTTTTCCCAATCCAAAATaGGCACCTTTTTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPFPNPK*APFSME
Trigger: TTCCATGGAAAAAGGTGCCAATTTTGGATTGGGAAA...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTCCAAATGGCAAAGTCTaGACTGGGGCTTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: TITILLCRTLLREHAEYLPNGKV*TGASAP
Trigger: AGGAGCTGAAGCCCCAGTCAAGACTTTGCCATTTGG...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGCAGAGTAAGACTCCATaGCCCAAGAAAAGAGAAGTC +
Preference number: 5 (lower is better)
Translates to: NTHTGKIQTQESAALPQMQSKTP*PKKREV
Trigger: GACTTCTCTTTTCTTGGGCAATGGAGTCTTACTCTG...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTTTTGTTGTTGCAATCTaGGGCAGGAAAATCACTAAT +
Preference number: 5 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPFVVAI*GRKITN
Trigger: ATTAGTGATTTTCCTGCCCAAGATTGCAACAACAAA...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTTGTAGTTCTACATATTaGTTGTTGCAATCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPCSSTY*LLQSWA
Trigger: TGCCCAAGATTGCAACAACAAATATGTAGAACTACA...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp TGGCAAAGTCTTGACTGGGGCTTCAGCTCCTTTCCCAATCCAAAATTGGCACCTTTTCAACTAGGGTGGTaGCATATTATCCTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: WQSLDWGFSSFPNPKLAPFQLGW*HIILSL
Trigger: TAAAGAGAGGATAATATGCAACCACCCTAGTTGAAA...AGGTGCCAATTTTGGATTGGGAAAGGAGCTGAAGCCCCAGTCAAGACTTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACTCTCTAGGGACTCCTTaGCAGGGTTTCTCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYSLGTP*QGFSGL
Trigger: AAGACCAGAGAAACCCTGCAAAGGAGTCCCTAGAGA...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367619.8
ENST00000540564.5
CDS-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGTCCTTCGCTCTATGGTaGTTTTTCTCTCCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: NTHTGKIQTQESAALPQMSFALW*FFSPSR
Trigger: TCTTGAAGGAGAGAAAAACAACCATAGAGCGAAGGA...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTATCTCAGCAAAGGCATaGAGCCAGCAGTGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: TITILLCRTLLREHAEYLISAKA*SQQCKK
Trigger: CTTTTTGCACTGCTGGCTCAATGCCTTTGCTGAGAT...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATATTCAAAAGATTGGCTaGCTCATAACCAGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNIQKIG*LITRSQ
Trigger: CTGAGACCTGGTTATGAGCAAGCCAATCTTTTGAAT...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATCTTGAGGTGAAGAGTTaGAGACCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNLEVKS*RPAWAT
Trigger: TGTTGCCCAGGCTGGTCTCAAACTCTTCACCTCAAG...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACGCCAGTGGCCCAATGTaGAAACAGAAAATAGGGAAC +
Preference number: 5 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYASGPM*KQKIGN
Trigger: GTTCCCTATTTTCTGTTTCAACATTGGGCCACTGGC...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATGCAGATTTGAATCTCTaGGAGAAAAACCAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNADLNL*EKNQRK
Trigger: CTTTCTCTGGTTTTTCTCCAAGAGATTCAAATCTGC...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATAACATGGCAGCAGATTaGAATCTCTTGGAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNNMAAD*NLLEKN
Trigger: GTTTTTCTCCAAGAGATTCAAATCTGCTGCCATGTT...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATAGTTCTACATATTTGTaGTTGCAATCTTGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNSSTYL*LQSWAG
Trigger: TCCTGCCCAAGATTGCAACAACAAATATGTAGAACT...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACCTTGAGGTGAAGAGTTaGAGACCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNLEVKS*RPAWAT
Trigger: TGTTGCCCAGGCTGGTCTCAAACTCTTCACCTCAAG...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS CCA 90 bp TTAGCTGAATTTAGTACCCGAGGCACGTTCTCTCTGACAAATGAGTaGGCCTTCATTACAAAACGAATCTGCTCGAATATAATGATGAAC +
Preference number: 5 (lower is better)
Translates to: LAEFSTRGTFSLTNE*AFITKRICSNIMMN
Trigger: GTTCATCATTATATTCGAGCAGATTCGTTTTGTAATGAAGGCCCACTCATTTGTCAGAGAGAACGTGCCTCGGGTACTAAATTCAGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGTCTCTAGGGACTCCTTaGCAGGGTTTCTCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMSLGTP*QGFSGL
Trigger: AAGACCAGAGAAACCCTGCAAAGGAGTCCCTAGAGA...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367619.8
ENST00000540564.5
CDS-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGAATAAAAATCTTTCCTaGTTCTGGAGGTGCTCTCAA +
Preference number: 5 (lower is better)
Translates to: NTHTGKIQTQESAALPQMNKNLS*FWRCSQ
Trigger: TTGAGAGCACCTCCAGAACAAGGAAAGATTTTTATT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATGCCAGTGGCCCAATGTaGAAACAGAAAATAGGGAAC +
Preference number: 5 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNASGPM*KQKIGN
Trigger: GTTCCCTATTTTCTGTTTCAACATTGGGCCACTGGC...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGAAGTACAAATACTGGTaGACTGTAGGTATTGGAACA +
Preference number: 5 (lower is better)
Translates to: NTHTGKIQTQESAALPQMKYKYW*TVGIGT
Trigger: TGTTCCAATACCTACAGTCAACCAGTATTTGTACTT...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACCTGAAGGGCTCCTGTTaGATATTCCGAAACAAGGGG +
Preference number: 5 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNLKGSC*IFRNKG
Trigger: CCCCTTGTTTCGGAATATCAAACAGGAGCCCTTCAG...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGTCATTGACAATGAAGTaGAAAGCCATTCCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: NTHTGKIQTQESAALPQMSLTMK*KAIPKN
Trigger: GTTCTTTGGAATGGCTTTCAACTTCATTGTCAATGA...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATTTTTTCCGACTATCATaGACAATGAAGTTGAAAGCC +
Preference number: 5 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNFFRLS*TMKLKA
Trigger: GGCTTTCAACTTCATTGTCAATGATAGTCGGAAAAA...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGGAAGCAGAGAGCTTTTaGAAAAATAGCCTTGATCAA +
Preference number: 5 (lower is better)
Translates to: NTHTGKIQTQESAALPQMEAESF*KNSLDQ
Trigger: TTGATCAAGGCTATTTTTCAAAAAGCTCTCTGCTTC...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATTTTGTTGTTGCAATCTaGGGCAGGAAAATCACTAAT +
Preference number: 5 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNFVVAI*GRKITN
Trigger: ATTAGTGATTTTCCTGCCCAAGATTGCAACAACAAA...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp ATAACTTCAGTAACAACTGGAAACAGCTGGCTCCAAATCAGGGAGCTACCCAATTGTAGTTCTACATATTaGTTGTTGCAATCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: ITSVTTGNSWLQIRELPNCSSTY*LLQSWA
Trigger: TGCCCAAGATTGCAACAACAAATATGTAGAACTACA...ATTGGGTAGCTCCCTGATTTGGAGCCAGCTGTTTCCAGTTGTTACTGAAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AACACACACACTGGAAAGATACAGACACAGGAATCTGCTGCATTACCCCAAATGTTTCAACTAGGGTGGTaGCATATTATCCTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: NTHTGKIQTQESAALPQMFQLGW*HIILSL
Trigger: TAAAGAGAGGATAATATGCAACCACCCTAGTTGAAA...CATTTGGGGTAATGCAGCAGATTCCTGTGTCTGTATCTTTCCAGTGTGTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS TCA 90 bp ACAAGTGTGCTGAGGATAAAGAGAATGAGGAGGGCAATAAACATGTaGTATATTGTTCTGATGTGGTCCACTTCAAGCAGTTCATCTAAG +
Preference number: 5 (lower is better)
Translates to: TSVLRIKRMRRAINM*YIVLMWSTSSSSSK
Trigger: CTTAGATGAACTGCTTGAAGTGGACCACATCAGAACAATATATCACATGTTTATTGCCCTCCTCATTCTCTTTATCCTCAGCACACTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367619.8
ENST00000426956.1
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGGATTTTCCCTGGACTTaGACAGCCGGTTTCTTAGAG +
Preference number: 5 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMDFPWT*TAGFLE
Trigger: CTCTAAGAAACCGGCTGTCAAAGTCCAGGGAAAATC...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367619.8
ENST00000540564.5
CDS-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGATCTCAGCAAAGGCATaGAGCCAGCAGTGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMISAKA*SQQCKK
Trigger: CTTTTTGCACTGCTGGCTCAATGCCTTTGCTGAGAT...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTAACATGGCAGCAGATTaGAATCTCTTGGAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: TITILLCRTLLREHAEYLNMAAD*NLLEKN
Trigger: GTTTTTCTCCAAGAGATTCAAATCTGCTGCCATGTT...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACTTCTTCCTAAGTGTTTaGGCTAATTCAGTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYFFLSV*ANSVAK
Trigger: CTTGGCCACTGAATTAGCCAAAACACTTAGGAAGAA...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACACCCAGAACAGACCTTaGTGTGTATACAGTGTATGT +
Preference number: 5 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYTQNRP*CVYSVC
Trigger: ACATACACTGTATACACACAAAGGTCTGTTCTGGGT...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS GCA 90 bp AAATGGCTTCAATTCCTCTGCCTCTGCTGTCAACTTTATCTTCTTTaGTATCAACTGTTTTATGTCAATTCGACCATTACTAGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: KWLQFLCLCCQLYLL*YQLFYVNSTITRCL
Trigger: GAGACACCTAGTAATGGTCGAATTGACATAAAACAGTTGATAGCAAAGAAGATAAAGTTGACAGCAGAGGCAGAGGAATTGAAGCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367619.8
ENST00000426956.1
CDS-3UTR CAA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATTCCTTCGCTCTATGGTaGTTTTTCTCTCCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNSFALW*FFSPSR
Trigger: TCTTGAAGGAGAGAAAAACAACCATAGAGCGAAGGA...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACGCAGATTTGAATCTCTaGGAGAAAAACCAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYADLNL*EKNQRK
Trigger: CTTTCTCTGGTTTTTCTCCAAGAGATTCAAATCTGC...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCAGAGTAAGACTCCATaGCCCAAGAAAAGAGAAGTC +
Preference number: 5 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMQSKTP*PKKREV
Trigger: GACTTCTCTTTTCTTGGGCAATGGAGTCTTACTCTG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATTTCTTCCTAAGTGTTTaGGCTAATTCAGTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNFFLSV*ANSVAK
Trigger: CTTGGCCACTGAATTAGCCAAAACACTTAGGAAGAA...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp ACAATTACAATACTGTTGTGCAGAACATTACTGCGGGAACATGCAGAGTACCTTTCTACATATTTGTTGTaGCAATCTTGGGCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: TITILLCRTLLREHAEYLSTYLL*QSWAGK
Trigger: TTTTCCTGCCCAAGATTGCAACAACAAATATGTAGA...AAGGTACTCTGCATGTTCCCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACAATAAAAATCTTTCCTaGTTCTGGAGGTGCTCTCAA +
Preference number: 5 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYNKNLS*FWRCSQ
Trigger: TTGAGAGCACCTCCAGAACAAGGAAAGATTTTTATT...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATGCAGATTTGAATCTCTaGGAGAAAAACCAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNADLNL*EKNQRK
Trigger: CTTTCTCTGGTTTTTCTCCAAGAGATTCAAATCTGC...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATACAATTACAATACTGTaGTGCAGAACATTACTGCGG +
Preference number: 5 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNTITIL*CRTLLR
Trigger: CCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp TTGAACTACATGGTCTCTGATACCCCTTCCAATGCTCAATCTTTACAATCATACTCTACATATTTGTTGTaGCAATCTTGGGCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: LNYMVSDTPSNAQSLQSYSTYLL*QSWAGK
Trigger: TTTTCCTGCCCAAGATTGCAACAACAAATATGTAGA...GTATGATTGTAAAGATTGAGCATTGGAAGGGGTATCAGAGACCATGTAGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AATACCAAGAGAGCCTCTCAAGTGGCTGTTCCAAGTAACAACTATCATTTAAATTTTCCCAATCCAAAATaGGCACCTTTTTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: NTKRASQVAVPSNNYHLNFPNPK*APFSME
Trigger: TTCCATGGAAAAAGGTGCCAATTTTGGATTGGGAAA...ATTTAAATGATAGTTGTTACTTGGAACAGCCACTTGAGAGGCTCTCTTGGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGCTAACACAACATATGTaGGTCCAAAACCTAGAACTC +
Preference number: 5 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMLTQHM*VQNLEL
Trigger: GAGTTCTAGGTTTTGGACCAACATATGTTGTGTTAG...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGAACATGGCAGCAGATTaGAATCTCTTGGAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMNMAAD*NLLEKN
Trigger: GTTTTTCTCCAAGAGATTCAAATCTGCTGCCATGTT...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACACAATTACAATACTGTaGTGCAGAACATTACTGCGG +
Preference number: 5 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNTITIL*CRTLLR
Trigger: CCGCAGTAATGTTCTGCACAACAGTATTGTAATTGT...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGAGTTCTACATATTTGTaGTTGCAATCTTGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMSSTYL*LQSWAG
Trigger: TCCTGCCCAAGATTGCAACAACAAATATGTAGAACT...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGAATAAAAATCTTTCCTaGTTCTGGAGGTGCTCTCAA +
Preference number: 5 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMNKNLS*FWRCSQ
Trigger: TTGAGAGCACCTCCAGAACAAGGAAAGATTTTTATT...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACAAGTACAAATACTGGTaGACTGTAGGTATTGGAACA +
Preference number: 5 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNKYKYW*TVGIGT
Trigger: TGTTCCAATACCTACAGTCAACCAGTATTTGTACTT...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGAAGTACAAATACTGGTaGACTGTAGGTATTGGAACA +
Preference number: 5 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMKYKYW*TVGIGT
Trigger: TGTTCCAATACCTACAGTCAACCAGTATTTGTACTT...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACTCATTGACAATGAAGTaGAAAGCCATTCCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNSLTMK*KAIPKN
Trigger: GTTCTTTGGAATGGCTTTCAACTTCATTGTCAATGA...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp AAGTTTATCACTCCATTAGGGCTTATTGACAGCAGAAATGTGAATGTAGTAATGTTTTTCCGACTATCATaGACAATGAAGTTGAAAGCC +
Preference number: 5 (lower is better)
Translates to: KFITPLGLIDSRNVNVVMFFRLS*TMKLKA
Trigger: GGCTTTCAACTTCATTGTCAATGATAGTCGGAAAAA...CATTACTACATTCACATTTCTGCTGTCAATAAGCCCTAATGGAGTGATAAACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACTTTTTCCGACTATCATaGACAATGAAGTTGAAAGCC +
Preference number: 5 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNFFRLS*TMKLKA
Trigger: GGCTTTCAACTTCATTGTCAATGATAGTCGGAAAAA...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACGAAGCAGAGAGCTTTTaGAAAAATAGCCTTGATCAA +
Preference number: 5 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNEAESF*KNSLDQ
Trigger: TTGATCAAGGCTATTTTTCAAAAAGCTCTCTGCTTC...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACTGTAGTTCTACATATTaGTTGTTGCAATCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNCSSTY*LLQSWA
Trigger: TGCCCAAGATTGCAACAACAAATATGTAGAACTACA...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS-3UTR CAA 90 bp GCAAGCAACTTTACCTGCAAAGTTTTAGTATGTGAATCTACCAACAAACAAAACTTTCAACTAGGGTGGTaGCATATTATCCTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: ASNFTCKVLVCESTNKQNFQLGW*HIILSL
Trigger: TAAAGAGAGGATAATATGCAACCACCCTAGTTGAAA...GTTTTGTTTGTTGGTAGATTCACATACTAAAACTTTGCAGGTAAAGTTGCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS CAA 72 bp CATAGGACCAGAACACGAGCGCTGAAGGGCTCCTGTTaGATATTCCGAAACAAGGGGGCACAAAGCCTTTCA +
Preference number: 6 (lower is better)
Translates to: HRTRTRALKGSC*IFRNKGAQSLS
Trigger: TGAAAGGCTTTGTGCCCCCTTGTTTCGGAATATCAAACAGGAGCCCTTCAGCGCTCGTGTTCTGGTCCTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS CCA 72 bp CTAGGTGTCTCTAGGGACTCCTTTGCAGGGTTTCTCTaGTCTTCATCTTCCTCAGGATTTTCCCTGGACTTT +
Preference number: 6 (lower is better)
Translates to: LGVSRDSFAGFL*SSSSSGFSLDF
Trigger: AAAGTCCAGGGAAAATCCTGAGGAAGATGAAGACCAGAGAAACCCTGCAAAGGAGTCCCTAGAGACACCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000426956.1
ENST00000540564.5
CDS CAA 90 bp CAGGGTTTCTCTGGTCTTCATCTTCCTCAGGATTTTCCCTGGACTTaGACAGCCGGTTTCTTAGAGACATCTTCTCTTCACCCACCATTG +
Preference number: 6 (lower is better)
Translates to: QGFSGLHLPQDFPWT*TAGFLETSSLHPPL
Trigger: CAATGGTGGGTGAAGAGAAGATGTCTCTAAGAAACCGGCTGTCAAAGTCCAGGGAAAATCCTGAGGAAGATGAAGACCAGAGAAACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000426956.1
ENST00000540564.5
CDS CAA 90 bp AAAATGGCTTCAATTCCTCTGCCTCTGCTGTCAACTTTATCTTCTTaGCTATCAACTGTTTTATGTCAATTCGACCTGAGGCCCGCGCCC +
Preference number: 6 (lower is better)
Translates to: KMASIPLPLLSTLSS*LSTVLCQFDLRPAP
Trigger: GGGCGCGGGCCTCAGGTCGAATTGACATAAAACAGTTGATAGCAAAGAAGATAAAGTTGACAGCAGAGGCAGAGGAATTGAAGCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539888.5
CDS CAA 72 bp TCTGGTCTTCATCTTCCTCAGGATTTTCCCTGGACTTaGACAGCCGGTTTCTTAGAGACATCTTCTCTTCAC +
Preference number: 6 (lower is better)
Translates to: SGLHLPQDFPWT*TAGFLETSSLH
Trigger: GTGAAGAGAAGATGTCTCTAAGAAACCGGCTGTCAAAGTCCAGGGAAAATCCTGAGGAAGATGAAGACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000426956.1
ENST00000540564.5
CDS CCA 72 bp GAGAGAGCGCCTTGCAATAAAAATCTTTCCTTGTTCTaGAGGTGCTCTCAAATCCTTCGCTCTATGGTTGTT +
Preference number: 6 (lower is better)
Translates to: ERAPCNKNLSLF*RCSQILRSMVV
Trigger: AACAACCATAGAGCGAAGGATTTGAGAGCACCTCCAGAACAAGGAAAGATTTTTATTGCAAGGCGCTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367619.8
ENST00000426956.1
ENST00000539888.5
ENST00000540564.5
CDS CCA 72 bp AACGGATCAGCGGATGAGAACTCTTGCTATAGCCAGTaGCCCAATGTTGAAACAGAAAATAGGGAACTGAAA +
Preference number: 6 (lower is better)
Translates to: NGSADENSCYSQ*PNVETENRELK
Trigger: TTTCAGTTCCCTATTTTCTGTTTCAACATTGGGCCACTGGCTATAGCAAGAGTTCTCATCCGCTGATCCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367619.8
ENST00000426956.1
ENST00000539888.5
ENST00000540564.5
CDS CCA 72 bp TTTAGTACCCGAGGCACGTTCTCTCTGACAAATGAGTaGGCCTTCATTACAAAACGAATCTGCTCGAATATA +
Preference number: 6 (lower is better)
Translates to: FSTRGTFSLTNE*AFITKRICSNI
Trigger: TATATTCGAGCAGATTCGTTTTGTAATGAAGGCCCACTCATTTGTCAGAGAGAACGTGCCTCGGGTACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS CAA 90 bp GAAGTCCACATCAGAACATTCCAAATCGGCTTTTTCCGACTATCATaGACAATGAAGTTGAAAGCCATTCCAAAGAACATGAAGAGCACG +
Preference number: 6 (lower is better)
Translates to: EVHIRTFQIGFFRLS*TMKLKAIPKNMKST
Trigger: CGTGCTCTTCATGTTCTTTGGAATGGCTTTCAACTTCATTGTCAATGATAGTCGGAAAAAGCCGATTTGGAATGTTCTGATGTGGACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5
CDS TCA 72 bp CGCACCCACCATTATCTAATGATGCTGACTTTTCAATaGGATTGGTCACAAAATCATCAAAGTGACTGCCAA +
Preference number: 6 (lower is better)
Translates to: RTHHYLMMLTFQ*DWSQNHQSDCQ
Trigger: TTGGCAGTCACTTTGATGATTTTGTGACCAATCTCATTGAAAAGTCAGCATCATTAGATAATGGTGGGTGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367619.8
ENST00000426956.1
ENST00000539888.5
ENST00000540564.5
CDS CAA 72 bp ATCAGAACATTCCAAATCGGCTTTTTCCGACTATCATaGACAATGAAGTTGAAAGCCATTCCAAAGAACATG +
Preference number: 6 (lower is better)
Translates to: IRTFQIGFFRLS*TMKLKAIPKNM
Trigger: CATGTTCTTTGGAATGGCTTTCAACTTCATTGTCAATGATAGTCGGAAAAAGCCGATTTGGAATGTTCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367619.8
ENST00000539888.5
ENST00000540564.5