Pregenerated sensors for SNX5 (Homo sapiens)
Ensembl gene IDs: ENSG00000089006Ensembl transcript IDs: ENST00000377759.9, ENST00000377768.7, ENST00000419004.2, ENST00000463050.5, ENST00000469704.1, ENST00000475716.5, ENST00000481323.1, ENST00000483485.5, ENST00000484809.1, ENST00000486039.1, ENST00000606557.1, ENST00000606570.1, ENST00000606602.1
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGTCTCCAGAGATCATCTCTCCAAGTCCGCTCGGCACCGGCGCCTaGGCTGGGGCTAAGGTCCCGCGTCTCTGGTTCTGTCCTAATAGA | + |
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Preference number: 1 (lower is better) Translates to: GSPEIISPSPLGTGA*AGAKVPRLWFCPNR Trigger: TCTATTAGGACAGAACCAGAGACGCGGGACCTTAGCCCCAGCTCAGGCGCCGGTGCCGAGCGGACTTGGAGAGATGATCTCTGGAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481323.1 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGGCTAAGGTCCCGCGTCTCTGGTTCTGTCCTAATAGAATCCGGGACATCCGGGGCAGCCTTCAGTaGAGACCAGGGAGAGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: AGAKVPRLWFCPNRIRDIRGSLQ*RPGRGA Trigger: GGCCCCTCTCCCTGGTCTTCACTGAAGGCTGCCCCG...GATGTCCCGGATTCTATTAGGACAGAACCAGAGACGCGGGACCTTAGCCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| 3UTR-3UTR TCA 90 bp | GGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACCTGCATGTTCGGACGCTTaGTGCAATTTCCCAAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: GATNQTGLSHVKSISRSPACSDA*CNFPSC Trigger: ACAACTTGGGAAATTGCATCAAGCGTCCGAACATGC...AGGTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
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| 3UTR-3UTR CCA 90 bp | TGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACAAGGTCCCGCGTCTCTaGTTCTGTCCTAATAGAATC | + |
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Preference number: 2 (lower is better) Translates to: WGQQTKLVCRMLSQFHVHKVPRL*FCPNRI Trigger: GATTCTATTAGGACAGAACCAGAGACGCGGGACCTT...GTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481323.1 |
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| 3UTR-3UTR TCA 90 bp | TTTAGACCTCAAGATACACGTGACCTAGGGACAGTTTACATCAATGGGCAAGACGCATGTTCGGACGCTTaGTGCAATTTCCCAAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: FRPQDTRDLGTVYINGQDACSDA*CNFPSC Trigger: ACAACTTGGGAAATTGCATCAAGCGTCCGAACATGC...GTCTTGCCCATTGATGTAAACTGTCCCTAGGTCACGTGTATCTTGAGGTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
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| 3UTR-3UTR TCA 90 bp | CAACTTAATCTCCAATGGTACAGAAAAACCAGGTGTGTAACGTTTGTAAGCACGAGTGCTGACACTGGGTaGAGGATACATGGGTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: QLNLQWYRKTRCVTFVSTSADTG*RIHGCF Trigger: AAAACACCCATGTATCCTTCACCCAGTGTCAGCACT...CGTGCTTACAAACGTTACACACCTGGTTTTTCTGTACCATTGGAGATTAAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000463050.5 |
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| 3UTR-3UTR GCA 90 bp | GGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACCTCACAACAACGCATTTTaGGTTTCTAAAGTTGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: GATNQTGLSHVKSISRSPHNNAF*VSKVVS Trigger: GCTTACAACTTTAGAAACGCAAAATGCGTTGTTGTG...AGGTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
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| 3UTR-3UTR GCA 90 bp | TTTAGACCTCAAGATACACGTGACCTAGGGACAGTTTACATCAATGGGCAAGACCACAACAACGCATTTTaGGTTTCTAAAGTTGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: FRPQDTRDLGTVYINGQDHNNAF*VSKVVS Trigger: GCTTACAACTTTAGAAACGCAAAATGCGTTGTTGTG...GTCTTGCCCATTGATGTAAACTGTCCCTAGGTCACGTGTATCTTGAGGTCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
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| 3UTR TCA 72 bp | GAGATCATCTCTCCAAGTCCGCTCGGCACCGGCGCCTaGGCTGGGGCTAAGGTCCCGCGTCTCTGGTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: EIISPSPLGTGA*AGAKVPRLWFC Trigger: ACAGAACCAGAGACGCGGGACCTTAGCCCCAGCTCAGGCGCCGGTGCCGAGCGGACTTGGAGAGATGATCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481323.1 |
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| 3UTR-3UTR CAA 90 bp | CAAGATACACGTGACCTAGGGACAGTTTACATCAATGGGCAAGACTTAAAAATAAGCATGTTCGGACGCTaGATGCAATTTCCCAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: QDTRDLGTVYINGQDLKISMFGR*MQFPKL Trigger: CAACTTGGGAAATTGCATCAAGCGTCCGAACATGCT...TATTTTTAAGTCTTGCCCATTGATGTAAACTGTCCCTAGGTCACGTGTATCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
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| CDS-3UTR TCA 90 bp | GTCCGCTCGGCACCGGCGCCTGAGCTGGGGCTAAGGTCCCGCGTCTCTGGTTCTCTCGGCACCGGCGCCTaGGCTGGGGCTAAGGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: VRSAPAPELGLRSRVSGSLGTGA*AGAKVP Trigger: CGGGACCTTAGCCCCAGCTCAGGCGCCGGTGCCGAG...AGAACCAGAGACGCGGGACCTTAGCCCCAGCTCAGGCGCCGGTGCCGAGCGGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| CDS-3UTR CCA 90 bp | GGACATCCACAGGGATTCCCCGGGGCAGCCTTCAGTGAAGACCAGGGAGAGGGGTTCCCGCGCTGGGGATaGCGGCGAGCAGCCACGGCC | + |
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Preference number: 4 (lower is better) Translates to: GHPQGFPGAAFSEDQGEGFPRWG*RRAATA Trigger: GGCCGTGGCTGCTCGCCGCCATCCCCAGCGCGGGAA...CCCCTCTCCCTGGTCTTCACTGAAGGCTGCCCCGGGGAATCCCTGTGGATGTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| CDS-3UTR GCA 90 bp | CCGGGACATCCACAGGGATTCCCCGGGGCAGCCTTCAGTGAAGACCAGGGAGAGCGCCACCATCCCAGCTaGCCCGGGAGCAGGCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: PGHPQGFPGAAFSEDQGERHHPS*PGSRRA Trigger: TGCTCGCCTGCTCCCGGGGCAGCTGGGATGGTGGCG...CTCTCCCTGGTCTTCACTGAAGGCTGCCCCGGGGAATCCCTGTGGATGTCCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486039.1 |
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| CDS-3UTR GCA 90 bp | CCGGGACATCCACAGGGATTCCCCGGGGCAGCCTTCAGTGAAGACCAGGGAGAGCCCGGGTCTCACGGGTaGTTCCCGCGCTGGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: PGHPQGFPGAAFSEDQGEPGSHG*FPRWGW Trigger: CCATCCCCAGCGCGGGAAGCACCCGTGAGACCCGGG...CTCTCCCTGGTCTTCACTGAAGGCTGCCCCGGGGAATCCCTGTGGATGTCCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| CDS-3UTR TCA 90 bp | CGGGACATCCACAGGGATTCCCCGGGGCAGCCTTCAGTGAAGACCAGGGAGAGGCGGGGCAGCCTTCAGTaGAGACCAGGGAGAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RDIHRDSPGQPSVKTRERRGSLQ*RPGRGA Trigger: GGCCCCTCTCCCTGGTCTTCACTGAAGGCTGCCCCG...CCTCTCCCTGGTCTTCACTGAAGGCTGCCCCGGGGAATCCCTGTGGATGTCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| CDS-3UTR GCA 90 bp | CGGGACATCCACAGGGATTCCCCGGGGCAGCCTTCAGTGAAGACCAGGGAGAGGCAGCCACGGCCTTGCTaGGGTCCTCCTCCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RDIHRDSPGQPSVKTRERQPRPC*GPPPAA Trigger: AGCAGCAGGAGGAGGACCGCAGCAAGGCCGTGGCTG...CCTCTCCCTGGTCTTCACTGAAGGCTGCCCCGGGGAATCCCTGTGGATGTCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| CDS-3UTR CCA 90 bp | AATCCGGGACATCCACAGGGATTCCCCGGGGCAGCCTTCAGTGAAGACCAGGGACGGGAACCGCGGCCATaGCGACGCGGGACTCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: NPGHPQGFPGAAFSEDQGREPRP*RRGTRA Trigger: TGCTCGAGTCCCGCGTCGCCATGGCCGCGGTTCCCG...TCCCTGGTCTTCACTGAAGGCTGCCCCGGGGAATCCCTGTGGATGTCCCGGATT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| CDS-3UTR CCA 90 bp | CCGGGACATCCACAGGGATTCCCCGGGGCAGCCTTCAGTGAAGACCAGGGAGAGGGCAAAGACGCCACGTaGGGCCTACCCTTGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: PGHPQGFPGAAFSEDQGEGKDAT*GLPLLR Trigger: GCGGAGCAAGGGTAGGCCCCACGTGGCGTCTTTGCC...CTCTCCCTGGTCTTCACTGAAGGCTGCCCCGGGGAATCCCTGTGGATGTCCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486039.1 |
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| CDS-3UTR TCA 90 bp | CGTCTCTGGTTCTGTCCTAATAGAATCCGGGACATCCACAGGGATTCCCCGGGGCTCGGCACCGGCGCCTaGGCTGGGGCTAAGGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: RLWFCPNRIRDIHRDSPGLGTGA*AGAKVP Trigger: CGGGACCTTAGCCCCAGCTCAGGCGCCGGTGCCGAG...CCCCGGGGAATCCCTGTGGATGTCCCGGATTCTATTAGGACAGAACCAGAGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| CDS-3UTR GCA 90 bp | AATCCGGGACATCCACAGGGATTCCCCGGGGCAGCCTTCAGTGAAGACCAGGGACGTGGGGCCTACCCTTaGTCCGCTCCACGAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: NPGHPQGFPGAAFSEDQGRGAYP*SAPRGG Trigger: GCCTCCTCGTGGAGCGGAGCAAGGGTAGGCCCCACG...TCCCTGGTCTTCACTGAAGGCTGCCCCGGGGAATCCCTGTGGATGTCCCGGATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000486039.1 |
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| CDS-3UTR CCA 90 bp | CGGGACATCCACAGGGATTCCCCGGGGCAGCCTTCAGTGAAGACCAGGGAGAGGCGAGCAGGGGCCGCCTaGCTGTGCGAGGAAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RDIHRDSPGQPSVKTRERRAGAA*LCEERR Trigger: TCTTCTTTCCTCGCACAGCCAGGCGGCCCCTGCTCG...CCTCTCCCTGGTCTTCACTGAAGGCTGCCCCGGGGAATCCCTGTGGATGTCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000486039.1 |
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| CDS-3UTR GCA 90 bp | CCGCGTCTCTGGTTCTGTCCTAATAGAATCCGGGACATCCACAGGGATTCCCCGAGCAGGGGCCGCCCTTaGTCCGCTCCACGAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PRLWFCPNRIRDIHRDSPSRGRP*SAPRGG Trigger: GCCTCCTCGTGGAGCGGAGCAAGGGCGGCCCCTGCT...CGGGGAATCCCTGTGGATGTCCCGGATTCTATTAGGACAGAACCAGAGACGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481323.1 |
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| CDS-3UTR CCA 90 bp | GGGCTAAGGTCCCGCGTCTCTGGTTCTGTCCTAATAGAATCCGGGACATCCACAGGGTGCTTCCCGCGCTaGGGATGGCGGCGAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GLRSRVSGSVLIESGTSTGCFPR*GWRRAA Trigger: GGCTGCTCGCCGCCATCCCCAGCGCGGGAAGCACCC...TGTGGATGTCCCGGATTCTATTAGGACAGAACCAGAGACGCGGGACCTTAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| CDS-3UTR CCA 90 bp | GGGCTAAGGTCCCGCGTCTCTGGTTCTGTCCTAATAGAATCCGGGACATCCACACGGGAACCGCGGCCATaGCGACGCGGGACTCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GLRSRVSGSVLIESGTSTREPRP*RRGTRA Trigger: TGCTCGAGTCCCGCGTCGCCATGGCCGCGGTTCCCG...TGTGGATGTCCCGGATTCTATTAGGACAGAACCAGAGACGCGGGACCTTAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| CDS-3UTR GCA 90 bp | GGGCTAAGGTCCCGCGTCTCTGGTTCTGTCCTAATAGAATCCGGGACATCCACACCTCCCAGTCCCCGCTaGCGTCCATCTTGGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GLRSRVSGSVLIESGTSTPPSPR*RPSWSR Trigger: CCGGCTCCAAGATGGACGGCAGCGGGGACTGGGAGG...TGTGGATGTCCCGGATTCTATTAGGACAGAACCAGAGACGCGGGACCTTAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486039.1 |
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| CDS-3UTR GCA 90 bp | TCTGGTTCTGTCCTAATAGAATCCGGGACATCCACAGGGATTCCCCGGGGCAGCCAGCCACGGCCTTGCTaGGGTCCTCCTCCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SGSVLIESGTSTGIPRGSQPRPC*GPPPAA Trigger: AGCAGCAGGAGGAGGACCGCAGCAAGGCCGTGGCTG...GCTGCCCCGGGGAATCCCTGTGGATGTCCCGGATTCTATTAGGACAGAACCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| CDS-3UTR GCA 90 bp | TCTGGTTCTGTCCTAATAGAATCCGGGACATCCACAGGGATTCCCCGGGGCAGCGAGCAGCCACGGCCTTaGTGCGGTCCTCCTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SGSVLIESGTSTGIPRGSEQPRP*CGPPPA Trigger: AGCAGGAGGAGGACCGCAGCAAGGCCGTGGCTGCTC...GCTGCCCCGGGGAATCCCTGTGGATGTCCCGGATTCTATTAGGACAGAACCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| CDS-3UTR CCA 90 bp | CCTGAGCTGGGGCTAAGGTCCCGCGTCTCTGGTTCTGTCCTAATAGAATCCGGGCGCTGCCGTCCATCTTaGAGCCGGGCAAAGACGCCA | + |
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Preference number: 4 (lower is better) Translates to: PELGLRSRVSGSVLIESGRCRPS*SRAKTP Trigger: TGGCGTCTTTGCCCGGCTCCAAGATGGACGGCAGCG...CCCGGATTCTATTAGGACAGAACCAGAGACGCGGGACCTTAGCCCCAGCTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486039.1 |
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| CDS-3UTR GCA 90 bp | AAGGTCCCGCGTCTCTGGTTCTGTCCTAATAGAATCCGGGACATCCACAGGGATGGGGCCGCCTGGCTGTaGGAGGAAAGAAGAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KVPRLWFCPNRIRDIHRDGAAWL*EERRSW Trigger: CCAGCTTCTTCTTTCCTCGCACAGCCAGGCGGCCCC...ATCCCTGTGGATGTCCCGGATTCTATTAGGACAGAACCAGAGACGCGGGACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486039.1 |
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| CDS-3UTR CCA 90 bp | AAGGAGGGTATTTTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAGGGTGCTTCCCGCGCTaGGGATGGCGGCGAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: KEGILGATNQTGLSHVKSGCFPR*GWRRAA Trigger: GGCTGCTCGCCGCCATCCCCAGCGCGGGAAGCACCC...TGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAAAATACCCTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000606557.1 |
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| CDS-3UTR CCA 90 bp | CTCCAGAGATCATCTCTCCAAGTCCGCTCGGCACCGGCGCCTGAGCTGGGGCTAGGAAGGAGGGTATTTTaGGGGCAACAAACCAAACTG | + |
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Preference number: 4 (lower is better) Translates to: LQRSSLQVRSAPAPELGLGRRVF*GQQTKL Trigger: CAGTTTGGTTTGTTGCCCCCAAAATACCCTCCTTCC...TAGCCCCAGCTCAGGCGCCGGTGCCGAGCGGACTTGGAGAGATGATCTCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481323.1 |
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| CDS-3UTR TCA 90 bp | TTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACTCGGCACCGGCGCCTaGGCTGGGGCTAAGGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LGATNQTGLSHVKSISRSLGTGA*AGAKVP Trigger: CGGGACCTTAGCCCCAGCTCAGGCGCCGGTGCCGAG...TGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000481323.1 ENST00000606557.1 ENST00000606602.1 |
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| CDS-3UTR TCA 90 bp | GAGGGTATTTTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTCTCGGCACCGGCGCCTaGGCTGGGGCTAAGGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: EGILGATNQTGLSHVKSILGTGA*AGAKVP Trigger: CGGGACCTTAGCCCCAGCTCAGGCGCCGGTGCCGAG...AATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAAAATACCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000481323.1 ENST00000606557.1 ENST00000606602.1 |
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| CDS-3UTR GCA 90 bp | CGTTCACCTACTGGTCACCACGAAGCCGAGGAAAGTTTTAAAAAGAACATTCCGCCCGGGTCTCACGGGTaGTTCCCGCGCTGGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: RSPTGHHEAEESFKKNIPPGSHG*FPRWGW Trigger: CCATCCCCAGCGCGGGAAGCACCCGTGAGACCCGGG...CGGAATGTTCTTTTTAAAACTTTCCTCGGCTTCGTGGTGACCAGTAGGTGAACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000481323.1 |
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| CDS-3UTR CCA 90 bp | GGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACCTCGGGAACCGCGGCCATaGCGACGCGGGACTCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GATNQTGLSHVKSISRSPREPRP*RRGTRA Trigger: TGCTCGAGTCCCGCGTCGCCATGGCCGCGGTTCCCG...AGGTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000481323.1 ENST00000606557.1 ENST00000606602.1 |
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| CDS-3UTR CCA 90 bp | TGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACCGGGAACCGCGGCCATaGCGACGCGGGACTCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: WGQQTKLVCRMLSQFHVHREPRP*RRGTRA Trigger: TGCTCGAGTCCCGCGTCGCCATGGCCGCGGTTCCCG...GTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000481323.1 ENST00000606557.1 ENST00000606602.1 |
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| CDS-3UTR CCA 90 bp | CACGTTCACCTACTGGTCACCACGAAGCCGAGGAAAGTTTTAAAAAGAACATTCTTCCCGCGCTGGGGATaGCGGCGAGCAGCCACGGCC | + |
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Preference number: 4 (lower is better) Translates to: HVHLLVTTKPRKVLKRTFFPRWG*RRAATA Trigger: GGCCGTGGCTGCTCGCCGCCATCCCCAGCGCGGGAA...GAATGTTCTTTTTAAAACTTTCCTCGGCTTCGTGGTGACCAGTAGGTGAACGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000481323.1 |
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| CDS-3UTR CCA 90 bp | GAGGGTATTTTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTTCCCGCGCTGGGGATaGCGGCGAGCAGCCACGGCC | + |
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Preference number: 4 (lower is better) Translates to: EGILGATNQTGLSHVKSIFPRWG*RRAATA Trigger: GGCCGTGGCTGCTCGCCGCCATCCCCAGCGCGGGAA...AATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAAAATACCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000606557.1 |
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| CDS-3UTR CCA 90 bp | TTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCAGGGTGCTTCCCGCGCTaGGGATGGCGGCGAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LGATNQTGLSHVKSISRSGCFPR*GWRRAA Trigger: GGCTGCTCGCCGCCATCCCCAGCGCGGGAAGCACCC...TGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000606557.1 |
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| CDS-3UTR CCA 90 bp | GCACCGGCGCCTGAGCTGGGGCTAAGGTCCCGCGTCTCTGGTTCTGTCCTAATAAAGGTCCCGCGTCTCTaGTTCTGTCCTAATAGAATC | + |
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Preference number: 4 (lower is better) Translates to: APAPELGLRSRVSGSVLIKVPRL*FCPNRI Trigger: GATTCTATTAGGACAGAACCAGAGACGCGGGACCTT...TATTAGGACAGAACCAGAGACGCGGGACCTTAGCCCCAGCTCAGGCGCCGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| CDS-3UTR GCA 90 bp | TGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACCGTGGGGCCTACCCTTaGTCCGCTCCACGAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: WGQQTKLVCRMLSQFHVHRGAYP*SAPRGG Trigger: GCCTCCTCGTGGAGCGGAGCAAGGGTAGGCCCCACG...GTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
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| CDS-3UTR TCA 90 bp | AGGGTATTTTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTGCCCGCCCAGGAGTCTaGGGCTGGGAGGACCTCACC | + |
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Preference number: 4 (lower is better) Translates to: RVFWGQQTKLVCRMLSQFARPGV*GWEDLT Trigger: GGTGAGGTCCTCCCAGCCTCAGACTCCTGGGCGGGC...AAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAAAATACCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000606557.1 |
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| CDS-3UTR GCA 90 bp | TGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACGAGCAGCCACGGCCTTaGTGCGGTCCTCCTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: WGQQTKLVCRMLSQFHVHEQPRP*CGPPPA Trigger: AGCAGGAGGAGGACCGCAGCAAGGCCGTGGCTGCTC...GTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481323.1 |
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| CDS-3UTR GCA 90 bp | GTATTTTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACCCCGGGTCTCACGGGTaGTTCCCGCGCTGGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: VFWGQQTKLVCRMLSQFHPGSHG*FPRWGW Trigger: CCATCCCCAGCGCGGGAAGCACCCGTGAGACCCGGG...GTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAAAATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000606557.1 |
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| CDS-3UTR TCA 90 bp | TTAAGTCAATTTCACGTTCACCTACTGGTCACCACGAAGCCGAGGAAAGTTTTACGGGGCAGCCTTCAGTaGAGACCAGGGAGAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSQFHVHLLVTTKPRKVLRGSLQ*RPGRGA Trigger: GGCCCCTCTCCCTGGTCTTCACTGAAGGCTGCCCCG...TAAAACTTTCCTCGGCTTCGTGGTGACCAGTAGGTGAACGTGAAATTGACTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481323.1 |
||
| CDS-3UTR GCA 90 bp | AGGGTATTTTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCGTGGGGCCTACCCTTaGTCCGCTCCACGAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVFWGQQTKLVCRMLSQFRGAYP*SAPRGG Trigger: GCCTCCTCGTGGAGCGGAGCAAGGGTAGGCCCCACG...AAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAAAATACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACCGAGCAGGGGCCGCCTaGCTGTGCGAGGAAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WGQQTKLVCRMLSQFHVHRAGAA*LCEERR Trigger: TCTTCTTTCCTCGCACAGCCAGGCGGCCCCTGCTCG...GTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR GCA 90 bp | CAAGATACACGTGACCTAGGGACAGTTTACATCAATGGGCAAGACTTAAAAATACGCCACCATCCCAGCTaGCCCGGGAGCAGGCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QDTRDLGTVYINGQDLKIRHHPS*PGSRRA Trigger: TGCTCGCCTGCTCCCGGGGCAGCTGGGATGGTGGCG...TATTTTTAAGTCTTGCCCATTGATGTAAACTGTCCCTAGGTCACGTGTATCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR CCA 90 bp | TTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACGCTGCCGTCCATCTTaGAGCCGGGCAAAGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGATNQTGLSHVKSISRSRCRPS*SRAKTP Trigger: TGGCGTCTTTGCCCGGCTCCAAGATGGACGGCAGCG...TGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR GCA 90 bp | CAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACCTACTGGGGGCCGCCTGGCTGTaGGAGGAAAGAAGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QQTKLVCRMLSQFHVHLLGAAWL*EERRSW Trigger: CCAGCTTCTTCTTTCCTCGCACAGCCAGGCGGCCCC...CAGTAGGTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR GCA 90 bp | CAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACCTACTGGGGAGGACCTCACCTTaGTGCGGTCCTCCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQTKLVCRMLSQFHVHLLGRTSP*CGPPPA Trigger: AGCAGGAGGAGGACCGCAGCAAGGTGAGGTCCTCCC...CAGTAGGTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606557.1 |
||
| CDS-3UTR CCA 90 bp | TTTAGACCTCAAGATACACGTGACCTAGGGACAGTTTACATCAATGGGCAAGACAAGGTCCCGCGTCTCTaGTTCTTGCTGCGGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRPQDTRDLGTVYINGQDKVPRL*FLLRSS Trigger: GGAGGACCGCAGCAAGAACCAGAGACGCGGGACCTT...GTCTTGCCCATTGATGTAAACTGTCCCTAGGTCACGTGTATCTTGAGGTCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606602.1 |
||
| CDS-3UTR GCA 90 bp | CCTACTAAAAATTACACAACTCCCACAACAACGCATTTTGCGTTTCTAAAGTTGCCTCCCAGTCCCCGCTaGCGTCCATCTTGGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PTKNYTTPTTTHFAFLKLPPSPR*RPSWSR Trigger: CCGGCTCCAAGATGGACGGCAGCGGGGACTGGGAGG...CAACTTTAGAAACGCAAAATGCGTTGTTGTGGGAGTTGTGTAATTTTTAGTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR GCA 90 bp | GTATTTTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACCGCGTCTCTGGTTCTTaGTGCGGTCCTCCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFWGQQTKLVCRMLSQFHRVSGS*CGPPPA Trigger: AGCAGGAGGAGGACCGCAGCAAGAACCAGAGACGCG...GTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAAAATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000606602.1 |
||
| CDS-3UTR GCA 90 bp | TTTGAGCACCTACTAAAAATTACACAACTCCCACAACAACGCATTTTGCGTTTCGGGGCCGCCTGGCTGTaGGAGGAAAGAAGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FEHLLKITQLPQQRILRFGAAWL*EERRSW Trigger: CCAGCTTCTTCTTTCCTCGCACAGCCAGGCGGCCCC...GAAACGCAAAATGCGTTGTTGTGGGAGTTGTGTAATTTTTAGTAGGTGCTCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR CCA 90 bp | CAAGATACACGTGACCTAGGGACAGTTTACATCAATGGGCAAGACTTAAAAATACGCTGCCGTCCATCTTaGAGCCGGGCAAAGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDTRDLGTVYINGQDLKIRCRPS*SRAKTP Trigger: TGGCGTCTTTGCCCGGCTCCAAGATGGACGGCAGCG...TATTTTTAAGTCTTGCCCATTGATGTAAACTGTCCCTAGGTCACGTGTATCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACTTCACGTTCACCTACTaGTCACCACGAAGCCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WGQQTKLVCRMLSQFHVHFTFTY*SPRSRG Trigger: TCCTCGGCTTCGTGGTGACCAGTAGGTGAACGTGAA...GTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000481323.1 ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR CCA 90 bp | TTTAGACCTCAAGATACACGTGACCTAGGGACAGTTTACATCAATGGGCAAGACAGCAGCCACGGCCTATaGACGCGCAAGGGAAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FRPQDTRDLGTVYINGQDSSHGL*TRKGKN Trigger: ATTCTTTCCCTTGCGCGTCCATAGGCCGTGGCTGCT...GTCTTGCCCATTGATGTAAACTGTCCCTAGGTCACGTGTATCTTGAGGTCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606557.1 |
||
| CDS-3UTR GCA 90 bp | GTGCATGTGCAAGTGATAAGGCAGAGGGGTGAAGTGCTGACACTGGGTGAAGGAGAAAGAAGAATGTCCTaGTCAACCTTCTTTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VHVQVIRQRGEVLTLGEGERRMS*STFFCR Trigger: TCTGCAAAAGAAGGTTGAGCAGGACATTCTTCTTTC...TCCTTCACCCAGTGTCAGCACTTCACCCCTCTGCCTTATCACTTGCACATGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463050.5 |
||
| CDS-3UTR CCA 90 bp | CCTACTAAAAATTACACAACTCCCACAACAACGCATTTTGCGTTTCTAAAGTTGCGAGCAGGGGCCGCCTaGCTGTGCGAGGAAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTKNYTTPTTTHFAFLKLRAGAA*LCEERR Trigger: TCTTCTTTCCTCGCACAGCCAGGCGGCCCCTGCTCG...CAACTTTAGAAACGCAAAATGCGTTGTTGTGGGAGTTGTGTAATTTTTAGTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR GCA 90 bp | CAAGATACACGTGACCTAGGGACAGTTTACATCAATGGGCAAGACTTAAAAATAGTCTCTGGTTCTTGCTaGGGTCCTCCTCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QDTRDLGTVYINGQDLKIVSGSC*GPPPAA Trigger: AGCAGCAGGAGGAGGACCGCAGCAAGAACCAGAGAC...TATTTTTAAGTCTTGCCCATTGATGTAAACTGTCCCTAGGTCACGTGTATCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606602.1 |
||
| CDS-3UTR CCA 90 bp | ACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACCTACTGGTCACCACGAAAAGGTCCCGCGTCTCTaGTTCTGTCCTAATAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: TGLSHVKSISRSPTGHHEKVPRL*FCPNRI Trigger: GATTCTATTAGGACAGAACCAGAGACGCGGGACCTT...TTCGTGGTGACCAGTAGGTGAACGTGAAATTGACTTAACATGCGACAGACCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481323.1 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGGTATTTTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAGGAAGGAGGGTATTTTaGGGGCAACAAACCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KEGILGATNQTGLSHVKSGRRVF*GQQTKL Trigger: CAGTTTGGTTTGTTGCCCCCAAAATACCCTCCTTCC...TGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAAAATACCCTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000481323.1 ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR TCA 90 bp | CAACTTAATCTCCAATGGTACAGAAAAACCAGGTGTGTAACGTTTGTAAGCACGAGAGGGGTGAAGTGCTaGCACTGGGTGAAGGATACA | + |
|
Preference number: 4 (lower is better) Translates to: QLNLQWYRKTRCVTFVSTRGVKC*HWVKDT Trigger: TGTATCCTTCACCCAGTGTCAGCACTTCACCCCTCT...CGTGCTTACAAACGTTACACACCTGGTTTTTCTGTACCATTGGAGATTAAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000463050.5 |
||
| CDS-3UTR TCA 90 bp | GAGGGTATTTTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTGCATGTTCGGACGCTTaGTGCAATTTCCCAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGILGATNQTGLSHVKSIACSDA*CNFPSC Trigger: ACAACTTGGGAAATTGCATCAAGCGTCCGAACATGC...AATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAAAATACCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR CCA 90 bp | GAGGGTATTTTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTAAGGTCCCGCGTCTCTaGTTCTGTCCTAATAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: EGILGATNQTGLSHVKSIKVPRL*FCPNRI Trigger: GATTCTATTAGGACAGAACCAGAGACGCGGGACCTT...AATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAAAATACCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000606557.1 |
||
| CDS-3UTR CCA 90 bp | GGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACCTCTTCTCAGTAAAAGGTaGGGGGAAGGAGGGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GATNQTGLSHVKSISRSPLLSKR*GEGGYF Trigger: AAAATACCCTCCTTCCCCCCACCTTTTACTGAGAAG...AGGTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000481323.1 ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGGTATTTTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCACTTCTCAGTAAAAGGTaGGGGGAAGGAGGGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: KEGILGATNQTGLSHVKSLLSKR*GEGGYF Trigger: AAAATACCCTCCTTCCCCCCACCTTTTACTGAGAAG...TGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAAAATACCCTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000481323.1 ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR CCA 90 bp | TTTGAGCACCTACTAAAAATTACACAACTCCCACAACAACGCATTTTGCGTTTCTTCACGTTCACCTACTaGTCACCACGAAGCCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FEHLLKITQLPQQRILRFFTFTY*SPRSRG Trigger: TCCTCGGCTTCGTGGTGACCAGTAGGTGAACGTGAA...GAAACGCAAAATGCGTTGTTGTGGGAGTTGTGTAATTTTTAGTAGGTGCTCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR TCA 90 bp | AGGGTATTTTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTACCTCAAGATACACGTaGCCTAGGGACAGTTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: RVFWGQQTKLVCRMLSQFTSRYT*PRDSLH Trigger: ATGTAAACTGTCCCTAGGTCACGTGTATCTTGAGGT...AAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAAAATACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR CCA 90 bp | AGGGTATTTTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCTTCTCAGTAAAAGGTaGGGGGAAGGAGGGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RVFWGQQTKLVCRMLSQFLLSKR*GEGGYF Trigger: AAAATACCCTCCTTCCCCCCACCTTTTACTGAGAAG...AAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAAAATACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000481323.1 ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR CCA 90 bp | CAAGATACACGTGACCTAGGGACAGTTTACATCAATGGGCAAGACTTAAAAATAGGAAGGAGGGTATTTTaGGGGCAACAAACCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QDTRDLGTVYINGQDLKIGRRVF*GQQTKL Trigger: CAGTTTGGTTTGTTGCCCCCAAAATACCCTCCTTCC...TATTTTTAAGTCTTGCCCATTGATGTAAACTGTCCCTAGGTCACGTGTATCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR TCA 90 bp | GTTTATCACAGCAAACAACCATACTGTAACCATACAAGAGAATGTCTTCAGTCTAGTGCTGACACTGGGTaGAGGATACATGGGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VYHSKQPYCNHTRECLQSSADTG*RIHGCF Trigger: AAAACACCCATGTATCCTTCACCCAGTGTCAGCACT...AGACTGAAGACATTCTCTTGTATGGTTACAGTATGGTTGTTTGCTGTGATAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463050.5 |
||
| CDS-3UTR GCA 90 bp | ACGTTTGTAAGCACGCAAAGCCATGAGGATGACTGTGCATGTGCAAGTGATAAGAAGAAGCATGACATATaGAACTTAATCTCCAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TFVSTQSHEDDCACASDKKKHDI*NLISNG Trigger: ACCATTGGAGATTAAGTTGCATATGTCATGCTTCTT...CTTATCACTTGCACATGCACAGTCATCCTCATGGCTTTGCGTGCTTACAAACGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463050.5 |
||
| CDS-3UTR GCA 90 bp | TTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACACAACAACGCATTTTaGGTTTCTAAAGTTGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGATNQTGLSHVKSISRSHNNAF*VSKVVS Trigger: GCTTACAACTTTAGAAACGCAAAATGCGTTGTTGTG...TGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR TCA 90 bp | CAACTTAATCTCCAATGGTACAGAAAAACCAGGTGTGTAACGTTTGTAAGCACGGGGCTAAAAGAAGCATaGCATATGCAACTTAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QLNLQWYRKTRCVTFVSTGLKEA*HMQLNL Trigger: GAGATTAAGTTGCATATGTCATGCTTCTTTTAGCCC...CGTGCTTACAAACGTTACACACCTGGTTTTTCTGTACCATTGGAGATTAAGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000463050.5 |
||
| CDS CCA 90 bp | TGGCTGTGCGAGGAAAGAAGAAGCTGGGCCGCCGCCGCCGCCGCCTaGGCGCCTCTCGGGGGCGGCCACGGCCCCGCCTCCGCCGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WLCEERRSWAAAAAA*APLGGGHGPASAGL Trigger: GAGGCCGGCGGAGGCGGGGCCGTGGCCGCCCCCGAGAGGCGCCCAGGCGGCGGCGGCGGCGGCCCAGCTTCTTCTTTCCTCGCACAGCCA 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000377759.9 ENST00000469704.1 ENST00000486039.1 ENST00000606557.1 ENST00000606602.1 |
||
| CDS GCA 90 bp | GCCCGACGGCGGCAGGAGGCCTCCGGACTCCGCCACCATCCCAGCTaGCCCGGGAGCAGGCGAGCAGGGCGCCACGTGCTCCCCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARRRQEASGLRHHPS*PGSRRAGRHVLPQS Trigger: GCTCTGGGGGAGCACGTGGCGCCCTGCTCGCCTGCTCCCGGGGCAGCTGGGATGGTGGCGGAGTCCGGAGGCCTCCTGCCGCCGTCGGGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000377759.9 ENST00000469704.1 ENST00000486039.1 ENST00000606557.1 ENST00000606602.1 |
||
| CDS CCA 90 bp | CGGGAACCGCGGCCATGGCGACGCGGGACTCGAGCAGGGGCCGCCTaGCTGTGCGAGGAAAGAAGAAGCTGGGCCGCCGCCGCCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: REPRPWRRGTRAGAA*LCEERRSWAAAAAA Trigger: GGCGGCGGCGGCGGCGGCCCAGCTTCTTCTTTCCTCGCACAGCCAGGCGGCCCCTGCTCGAGTCCCGCGTCGCCATGGCCGCGGTTCCCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000377759.9 ENST00000419004.2 ENST00000469704.1 ENST00000486039.1 ENST00000606557.1 ENST00000606602.1 |
||
| CDS CCA 90 bp | CGGGTGCTTCCCGCGCTGGGGATGGCGGCGAGCAGCCACGGCCTATaGACGCGCAAGGGAAAGAATGCAGCGACCCCGGAGCTCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVLPALGMAASSHGL*TRKGKNAATPELAG Trigger: CCCTGCGAGCTCCGGGGTCGCTGCATTCTTTCCCTTGCGCGTCCATAGGCCGTGGCTGCTCGCCGCCATCCCCAGCGCGGGAAGCACCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606557.1 |
||
| CDS CCA 90 bp | GGAGAGGGGCCGCCCGGGTCTCACGGGTGCTTCCCGCGCTGGGGATaGCGGCGAGCAGCCACGGCCTATGGACGCGCAAGGGAAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: GEGPPGSHGCFPRWG*RRAATAYGRARERM Trigger: CATTCTTTCCCTTGCGCGTCCATAGGCCGTGGCTGCTCGCCGCCATCCCCAGCGCGGGAAGCACCCGTGAGACCCGGGCGGCCCCTCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606557.1 |
||
| CDS-3UTR CAA 90 bp | GGTCTCCAGAGATCATCTCTCCAAGTCCGCTCGGCACCGGCGCCTGAGCTGGGGCGAGCAGCCACGGCCTaGCTGCGGTCCTCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLQRSSLQVRSAPAPELGRAATA*LRSSSC Trigger: GCAGGAGGAGGACCGCAGCAAGGCCGTGGCTGCTCG...CCCCAGCTCAGGCGCCGGTGCCGAGCGGACTTGGAGAGATGATCTCTGGAGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481323.1 |
||
| CDS-3UTR CAA 90 bp | CGGGACATCCACAGGGATTCCCCGGGGCAGCCTTCAGTGAAGACCAGGGAGAGGCGAGCAGCCACGGCCTaGCTGCGGTCCTCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RDIHRDSPGQPSVKTRERRAATA*LRSSSC Trigger: GCAGGAGGAGGACCGCAGCAAGGCCGTGGCTGCTCG...CCTCTCCCTGGTCTTCACTGAAGGCTGCCCCGGGGAATCCCTGTGGATGTCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
||
| CDS TCA 90 bp | GGGTCTCCAGAGATCATCTCTCCAAGTCCGCTCGGCACCGGCGCCTaGGCTGGGGCTAAGGTCCCGCGTCTCTGGTTCTTGCTGCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSPEIISPSPLGTGA*AGAKVPRLWFLLRS Trigger: GGACCGCAGCAAGAACCAGAGACGCGGGACCTTAGCCCCAGCTCAGGCGCCGGTGCCGAGCGGACTTGGAGAGATGATCTCTGGAGACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606602.1 |
||
| CDS-3UTR CAA 90 bp | GCTGGGGCTAAGGTCCCGCGTCTCTGGTTCTGTCCTAATAGAATCCGGGACATCACGTGGGGCCTACCCTaGCTCCGCTCCACGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGAKVPRLWFCPNRIRDITWGLP*LRSTRR Trigger: CCTCCTCGTGGAGCGGAGCAAGGGTAGGCCCCACGT...GATGTCCCGGATTCTATTAGGACAGAACCAGAGACGCGGGACCTTAGCCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486039.1 |
||
| CDS-3UTR CAA 90 bp | TCTGGTTCTGTCCTAATAGAATCCGGGACATCCACAGGGATTCCCCGGGGCAGCCCGCTGCCGTCCATCTaGGAGCCGGGCAAAGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGSVLIESGTSTGIPRGSPLPSI*EPGKDA Trigger: GGCGTCTTTGCCCGGCTCCAAGATGGACGGCAGCGG...GCTGCCCCGGGGAATCCCTGTGGATGTCCCGGATTCTATTAGGACAGAACCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486039.1 |
||
| CDS CCA 90 bp | CAGCCTCACTCTCACCCTCTAGGTACCAGTGACTGGGAACAGGGCTaGAGTATGGGTGGTGGTGAGCCACATACTTCACCAATGGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QPHSHPLGTSDWEQG*SMGGGEPHTSPMAC Trigger: ACAAGCCATTGGTGAAGTATGTGGCTCACCACCACCCATACTCCAGCCCTGTTCCCAGTCACTGGTACCTAGAGGGTGAGAGTGAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000484809.1 ENST00000606570.1 |
||
| CDS CCA 90 bp | CACGTTGATGAGCAGCCTCACTCTCACCCTCTAGGTACCAGTGACTaGGAACAGGGCTGGAGTATGGGTGGTGGTGAGCCACATACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HVDEQPHSHPLGTSD*EQGWSMGGGEPHTS Trigger: TGAAGTATGTGGCTCACCACCACCCATACTCCAGCCCTGTTCCCAGTCACTGGTACCTAGAGGGTGAGAGTGAGGCTGCTCATCAACGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000484809.1 ENST00000606570.1 |
||
| CDS CCA 90 bp | ACGTACCACGCATCCCCATTTCATGTTTCAGCTCCTCTCCCTCAGTaGGTAAGGCTACCAGCCAAAGAGCCGACGTTCACTCCAGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: TYHASPFHVSAPLPQ*VRLPAKEPTFTPAP Trigger: AGGTGCTGGAGTGAACGTCGGCTCTTTGGCTGGTAGCCTTACCCACTGAGGGAGAGGAGCTGAAACATGAAATGGGGATGCGTGGTACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACACGTGGGGCCTACCCTaGCTCCGCTCCACGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WGQQTKLVCRMLSQFHVHTWGLP*LRSTRR Trigger: CCTCCTCGTGGAGCGGAGCAAGGGTAGGCCCCACGT...GTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR CAA 90 bp | GGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACCTCCGCTGCCGTCCATCTaGGAGCCGGGCAAAGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: GATNQTGLSHVKSISRSPPLPSI*EPGKDA Trigger: GGCGTCTTTGCCCGGCTCCAAGATGGACGGCAGCGG...AGGTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR CAA 90 bp | ATTTCACGTTCACCTACTGGTCACCACGAAGCCGAGGAAAGTTTTAAAAAGAACGAGCAGGGGCCGCCCTaGCTCCGCTCCACGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISRSPTGHHEAEESFKKNEQGPP*LRSTRR Trigger: CCTCCTCGTGGAGCGGAGCAAGGGCGGCCCCTGCTC...GTTCTTTTTAAAACTTTCCTCGGCTTCGTGGTGACCAGTAGGTGAACGTGAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000481323.1 |
||
| CDS GCA 90 bp | AGCCAGAGCAAGCTGGCCCTTCTCTTCATCAAATCCCAGGTGAACTaGAACGTACCACGCATCCCCATTTCATGTTTCAGCTCCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SQSKLALLFIKSQVN*NVPRIPISCFSSSP Trigger: GGGAGAGGAGCTGAAACATGAAATGGGGATGCGTGGTACGTTGCAGTTCACCTGGGATTTGATGAAGAGAAGGGCCAGCTTGCTCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS-3UTR CAA 90 bp | TTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACCGCGTCTCTGGTTCTaGCTGCGGTCCTCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGATNQTGLSHVKSISRSPRLWF*LRSSSC Trigger: GCAGGAGGAGGACCGCAGCAAGAACCAGAGACGCGG...TGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606602.1 |
||
| CDS-3UTR CAA 90 bp | AAAAAGAACATTCCGGGGTCTCCAGAGATCATCTCTCCAAGTCCGCTCGGCACCGGGAAGGAGGGTATTTaGGGGGCAACAAACCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: KKNIPGSPEIISPSPLGTGKEGI*GATNQT Trigger: AGTTTGGTTTGTTGCCCCCAAAATACCCTCCTTCCC...GGTGCCGAGCGGACTTGGAGAGATGATCTCTGGAGACCCCGGAATGTTCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000481323.1 |
||
| CDS-3UTR CAA 90 bp | AGGGTATTTTGGGGGCAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTTGGGAGGACCTCACCTaGCTGCGGTCCTCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RVFWGQQTKLVCRMLSQFWEDLT*LRSSSC Trigger: GCAGGAGGAGGACCGCAGCAAGGTGAGGTCCTCCCA...AAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTGCCCCCAAAATACCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000606557.1 |
||
| CDS TCA 90 bp | AAGTCAGCCAGAGCAAGCTGGCCCTTCTCTTCATCAAATCCCAGGTaGACTGCAACGTACCACGCATCCCCATTTCATGTTTCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KSARASWPFSSSNPR*TATYHASPFHVSAP Trigger: AGGAGCTGAAACATGAAATGGGGATGCGTGGTACGTTGCAGTTCACCTGGGATTTGATGAAGAGAAGGGCCAGCTTGCTCTGGCTGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS-3UTR CAA 90 bp | CCTACTAAAAATTACACAACTCCCACAACAACGCATTTTGCGTTTCTAAAGTTGACGTGGGGCCTACCCTaGCTCCGCTCCACGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PTKNYTTPTTTHFAFLKLTWGLP*LRSTRR Trigger: CCTCCTCGTGGAGCGGAGCAAGGGTAGGCCCCACGT...CAACTTTAGAAACGCAAAATGCGTTGTTGTGGGAGTTGTGTAATTTTTAGTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS TCA 90 bp | TACACACAGTACCAGGGCTCCATACACTTAACTATTCACCTCCTGTaGAACCAGCCCTTACCCACTGACTCAACTCTAGTCGTCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YTQYQGSIHLTIHLL*NQPLPTDSTLVVSS Trigger: TGAGCTGACGACTAGAGTTGAGTCAGTGGGTAAGGGCTGGTTTCACAGGAGGTGAATAGTTAAGTGTATGGAGCCCTGGTACTGTGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS CCA 90 bp | AACAGGGCTGGAGTATGGGTGGTGGTGAGCCACATACTTCACCAATaGCTTGTGAAAATGCTTCTCAAAAGAAGACATACCAGGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: NRAGVWVVVSHILHQ*LVKMLLKRRHTRFM Trigger: CATGAACCTGGTATGTCTTCTTTTGAGAAGCATTTTCACAAGCCATTGGTGAAGTATGTGGCTCACCACCACCCATACTCCAGCCCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000484809.1 ENST00000606570.1 |
||
| CDS-3UTR CAA 90 bp | CAACAAACCAAACTGGTCTGTCGCATGTTAAGTCAATTTCACGTTCACCTACTGGGGAAGGAGGGTATTTaGGGGGCAACAAACCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: QQTKLVCRMLSQFHVHLLGKEGI*GATNQT Trigger: AGTTTGGTTTGTTGCCCCCAAAATACCCTCCTTCCC...CAGTAGGTGAACGTGAAATTGACTTAACATGCGACAGACCAGTTTGGTTTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000481323.1 ENST00000606557.1 ENST00000606602.1 |
||
| CDS-3UTR CAA 90 bp | TTTAGACCTCAAGATACACGTGACCTAGGGACAGTTTACATCAATGGGCAAGACAGCATGTTCGGACGCTaGATGCAATTTCCCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FRPQDTRDLGTVYINGQDSMFGR*MQFPKL Trigger: CAACTTGGGAAATTGCATCAAGCGTCCGAACATGCT...GTCTTGCCCATTGATGTAAACTGTCCCTAGGTCACGTGTATCTTGAGGTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS GCA 90 bp | AGTGTTCAGAGCAGACTCACCCTCCTTCCTGTCTCTACAGTGCTGTaGAAAAGAACTACAATACAAGCAGCCACATCCAAGTTAAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVQSRLTLLPVSTVL*KRTTIQAATSKLKS Trigger: ACTTTTTAACTTGGATGTGGCTGCTTGTATTGTAGTTCTTTTGCACAGCACTGTAGAGACAGGAAGGAGGGTGAGTCTGCTCTGAACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS TCA 90 bp | GCAAGGCAGACCAGTGAATTATTAAAACTTGCCATATACCTGGAATaGCTCAAGTACACCAACACGGCTTTTCACGGGAGGTTTAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ARQTSELLKLAIYLE*LKYTNTAFHGRFKV Trigger: GACTTTAAACCTCCCGTGAAAAGCCGTGTTGGTGTACTTGAGTCATTCCAGGTATATGGCAAGTTTTAATAATTCACTGGTCTGCCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS-3UTR CAA 90 bp | TTTGAGCACCTACTAAAAATTACACAACTCCCACAACAACGCATTTTGCGTTTCGGGAAGGAGGGTATTTaGGGGGCAACAAACCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: FEHLLKITQLPQQRILRFGKEGI*GATNQT Trigger: AGTTTGGTTTGTTGCCCCCAAAATACCCTCCTTCCC...GAAACGCAAAATGCGTTGTTGTGGGAGTTGTGTAATTTTTAGTAGGTGCTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000606557.1 ENST00000606602.1 |
||
| CDS TCA 90 bp | GCTTTCAGGCACCAGCATTATTTCCTCACATTTGTATTATCTCTGTaGCTGGGACACATCAGACATCTATTAACTGTGGTGATACAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: AFRHQHYFLTFVLSL*LGHIRHLLTVVIQL Trigger: TAGCTGTATCACCACAGTTAATAGATGTCTGATGTGTCCCAGTCACAGAGATAATACAAATGTGAGGAAATAATGCTGGTGCCTGAAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000484809.1 ENST00000606570.1 |
||
| CDS CCA 90 bp | TTCATCTACTCCTATTGCCATCAGAATTCGGCATTAATGACCCATTaGAAATTGGAACAAACCAAGAATATGCATGTCCGCCCTAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: FIYSYCHQNSALMTH*KLEQTKNMHVRPNS Trigger: GGAATTAGGGCGGACATGCATATTCTTGGTTTGTTCCAATTTCCAATGGGTCATTAATGCCGAATTCTGATGGCAATAGGAGTAGATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS TCA 90 bp | AATTTCATAGTGATATGTCAAGTCTATAGTGCTTGCACTACAAGGTaGTGTTTATCAGTCCCTTGGATATCCTGGGTGAAGATAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NFIVICQVYSACTTR*CLSVPWISWVKISS Trigger: GGAGCTTATCTTCACCCAGGATATCCAAGGGACTGATAAACATCACCTTGTAGTGCAAGCACTATAGACTTGACATATCACTATGAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS TCA 90 bp | TACCATATGATCCAGCAAACCCACTTCTGGGAATATAAAAGGAACTaGAATCAGTATCTCAATGGGATATCCGTACTTCCATGTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: YHMIQQTHFWEYKRN*NQYLNGISVLPCSL Trigger: CAGTGAACATGGAAGTACGGATATCCCATTGAGATACTGATTTCAGTTCCTTTTATATTCCCAGAAGTGGGTTTGCTGGATCATATGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS TCA 90 bp | AATGAGATTACCTCACACCTGCTAGAATGCATTTTCTCAAATAGATaGAAGATCAGTGTTAGCAACAATGCAGAGAAAAGTGAACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NEITSHLLECIFSNR*KISVSNNAEKSELF Trigger: GAAGAGTTCACTTTTCTCTGCATTGTTGCTAACACTGATCTTTCATCTATTTGAGAAAATGCATTCTAGCAGGTGTGAGGTAATCTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS CCA 90 bp | ACAATTTTCATGTTCACTTTAACTACCAAATGGCATTCTTACAAATaGTCTCCAATGCTTTCAGGCACCAGCATTATTTCCTCACATTTG | + |
|
Preference number: 5 (lower is better) Translates to: TIFMFTLTTKWHSYK*SPMLSGTSIISSHL Trigger: CAAATGTGAGGAAATAATGCTGGTGCCTGAAAGCATTGGAGACCATTTGTAAGAATGCCATTTGGTAGTTAAAGTGAACATGAAAATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484809.1 ENST00000606570.1 |
||
| CDS CCA 72 bp | GAGGGGCCGCCCGGGTCTCACGGGTGCTTCCCGCGCTaGGGATGGCGGCGAGCAGCCACGGCCTTGCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: EGPPGSHGCFPR*GWRRAATALLR Trigger: CCGCAGCAAGGCCGTGGCTGCTCGCCGCCATCCCCAGCGCGGGAAGCACCCGTGAGACCCGGGCGGCCCCTC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| CDS CCA 72 bp | CCGCCCGGGTCTCACGGGTGCTTCCCGCGCTGGGGATaGCGGCGAGCAGCCACGGCCTTGCTGCGGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PPGSHGCFPRWG*RRAATALLRSS Trigger: GGAGGACCGCAGCAAGGCCGTGGCTGCTCGCCGCCATCCCCAGCGCGGGAAGCACCCGTGAGACCCGGGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000481323.1 ENST00000486039.1 |
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| CDS CCA 72 bp | GAGGGGCCGCCCGGGTCTCACGGGTGCTTCCCGCGCTaGGGATGGCGGCGAGCAGCCACGGCCTATGGACGC | + |
|
Preference number: 6 (lower is better) Translates to: EGPPGSHGCFPR*GWRRAATAYGR Trigger: GCGTCCATAGGCCGTGGCTGCTCGCCGCCATCCCCAGCGCGGGAAGCACCCGTGAGACCCGGGCGGCCCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606557.1 |
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| CDS CCA 72 bp | CCGCCCGGGTCTCACGGGTGCTTCCCGCGCTGGGGATaGCGGCGAGCAGCCACGGCCTATGGACGCGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPGSHGCFPRWG*RRAATAYGRAR Trigger: CCTTGCGCGTCCATAGGCCGTGGCTGCTCGCCGCCATCCCCAGCGCGGGAAGCACCCGTGAGACCCGGGCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606557.1 |
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| CDS CCA 72 bp | CGGCCATGGCGACGCGGGACTCGAGCAGGGGCCGCCTaGCTGTGCGAGGAAAGAAGAAGCTGGGCCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RPWRRGTRAGAA*LCEERRSWAAA Trigger: GGCGGCGGCCCAGCTTCTTCTTTCCTCGCACAGCCAGGCGGCCCCTGCTCGAGTCCCGCGTCGCCATGGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000377759.9 ENST00000419004.2 ENST00000469704.1 ENST00000486039.1 ENST00000606557.1 ENST00000606602.1 |
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| CDS CAA 72 bp | CCCAGAGCAGCCTCCCAGTCCCCGCTGCCGTCCATCTaGGAGCCGGGCAAAGACGCCACGTGGGGCCTACCC | + |
|
Preference number: 6 (lower is better) Translates to: PRAASQSPLPSI*EPGKDATWGLP Trigger: GGGTAGGCCCCACGTGGCGTCTTTGCCCGGCTCCAAGATGGACGGCAGCGGGGACTGGGAGGCTGCTCTGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000377759.9 ENST00000469704.1 ENST00000486039.1 ENST00000606557.1 ENST00000606602.1 |
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| CDS CCA 72 bp | CTGCCGTCCATCTTGGAGCCGGGCAAAGACGCCACGTaGGGCCTACCCTTGCTCCGCTCCACGAGGAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LPSILEPGKDAT*GLPLLRSTRRP Trigger: CGGCCTCCTCGTGGAGCGGAGCAAGGGTAGGCCCCACGTGGCGTCTTTGCCCGGCTCCAAGATGGACGGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000377759.9 ENST00000469704.1 ENST00000486039.1 ENST00000606557.1 ENST00000606602.1 |
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| CDS CCA 72 bp | CCAGAGCAGCCTCCCAGTCCCCGCTGCCGTCCATCTTaGAGCCGGGCAAAGACGCCACGTGGGGCCTACCCT | + |
|
Preference number: 6 (lower is better) Translates to: PEQPPSPRCRPS*SRAKTPRGAYP Trigger: AGGGTAGGCCCCACGTGGCGTCTTTGCCCGGCTCCAAGATGGACGGCAGCGGGGACTGGGAGGCTGCTCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000377759.9 ENST00000469704.1 ENST00000486039.1 ENST00000606557.1 ENST00000606602.1 |
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| CDS CAA 90 bp | CGAGCGCTGACGTCACCAGATCTCGTGAGAGCAGAAGGGCGCGATTaGGAGGCTCCCGCGCTTCGGAGACGCCGGCCCTTCCGCTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RALTSPDLVRAEGRD*EAPALRRRRPFRSE Trigger: CTCCGAGCGGAAGGGCCGGCGTCTCCGAAGCGCGGGAGCCTCCAAATCGCGCCCTTCTGCTCTCACGAGATCTGGTGACGTCAGCGCTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377768.7 |
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| CDS CAA 72 bp | ACGTCACCAGATCTCGTGAGAGCAGAAGGGCGCGATTaGGAGGCTCCCGCGCTTCGGAGACGCCGGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSPDLVRAEGRD*EAPALRRRRPF Trigger: GAAGGGCCGGCGTCTCCGAAGCGCGGGAGCCTCCAAATCGCGCCCTTCTGCTCTCACGAGATCTGGTGACGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377768.7 |
||
| CDS TCA 72 bp | GAGATCATCTCTCCAAGTCCGCTCGGCACCGGCGCCTaGGCTGGGGCTAAGGTCCCGCGTCTCTGGTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EIISPSPLGTGA*AGAKVPRLWFL Trigger: CAAGAACCAGAGACGCGGGACCTTAGCCCCAGCTCAGGCGCCGGTGCCGAGCGGACTTGGAGAGATGATCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606602.1 |
||
| CDS CCA 72 bp | GAGCAGCCTCACTCTCACCCTCTAGGTACCAGTGACTaGGAACAGGGCTGGAGTATGGGTGGTGGTGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: EQPHSHPLGTSD*EQGWSMGGGEP Trigger: TGGCTCACCACCACCCATACTCCAGCCCTGTTCCCAGTCACTGGTACCTAGAGGGTGAGAGTGAGGCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000484809.1 ENST00000606570.1 |
||
| CDS CCA 72 bp | TCTCACCCTCTAGGTACCAGTGACTGGGAACAGGGCTaGAGTATGGGTGGTGGTGAGCCACATACTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SHPLGTSDWEQG*SMGGGEPHTSP Trigger: TGGTGAAGTATGTGGCTCACCACCACCCATACTCCAGCCCTGTTCCCAGTCACTGGTACCTAGAGGGTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000484809.1 ENST00000606570.1 |
||
| CDS CAA 72 bp | CCAAGCATCGTGAGTGGGAGAGCAGCAGCTTATGACTaGGAGAACACGTTGATGAGCAGCCTCACTCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: PSIVSGRAAAYD*ENTLMSSLTLT Trigger: GGTGAGAGTGAGGCTGCTCATCAACGTGTTCTCCAAGTCATAAGCTGCTGCTCTCCCACTCACGATGCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000484809.1 ENST00000606570.1 |
||
| CDS GCA 72 bp | AGAGCCGACGTTCACTCCAGCACCTCTGCCCTCACCTaGTTGCTCCTAAATGTGATCCTGCTTACTGTAACT | + |
|
Preference number: 6 (lower is better) Translates to: RADVHSSTSALT*LLLNVILLTVT Trigger: AGTTACAGTAAGCAGGATCACATTTAGGAGCAAGCAGGTGAGGGCAGAGGTGCTGGAGTGAACGTCGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS TCA 72 bp | ATCACCAAGCATCGTGAGTGGGAGAGCAGCAGCTTATaGCTTGGAGAACACGTTGATGAGCAGCCTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: ITKHREWESSSL*LGEHVDEQPHS Trigger: AGAGTGAGGCTGCTCATCAACGTGTTCTCCAAGTCATAAGCTGCTGCTCTCCCACTCACGATGCTTGGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000484809.1 ENST00000606570.1 |
||
| CDS TCA 72 bp | AGAGCAAGCTGGCCCTTCTCTTCATCAAATCCCAGGTaGACTGCAACGTACCACGCATCCCCATTTCATGTT | + |
|
Preference number: 6 (lower is better) Translates to: RASWPFSSSNPR*TATYHASPFHV Trigger: AACATGAAATGGGGATGCGTGGTACGTTGCAGTTCACCTGGGATTTGATGAAGAGAAGGGCCAGCTTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS GCA 72 bp | AAGCTGGCCCTTCTCTTCATCAAATCCCAGGTGAACTaGAACGTACCACGCATCCCCATTTCATGTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KLALLFIKSQVN*NVPRIPISCFS Trigger: GCTGAAACATGAAATGGGGATGCGTGGTACGTTGCAGTTCACCTGGGATTTGATGAAGAGAAGGGCCAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS TCA 72 bp | TACCAGGGCTCCATACACTTAACTATTCACCTCCTGTaGAACCAGCCCTTACCCACTGACTCAACTCTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: YQGSIHLTIHLL*NQPLPTDSTLV Trigger: GACTAGAGTTGAGTCAGTGGGTAAGGGCTGGTTTCACAGGAGGTGAATAGTTAAGTGTATGGAGCCCTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS GCA 72 bp | AGCAGACTCACCCTCCTTCCTGTCTCTACAGTGCTGTaGAAAAGAACTACAATACAAGCAGCCACATCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRLTLLPVSTVL*KRTTIQAATSK Trigger: CTTGGATGTGGCTGCTTGTATTGTAGTTCTTTTGCACAGCACTGTAGAGACAGGAAGGAGGGTGAGTCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606570.1 |
||
| CDS TCA 72 bp | TTTGCCAGCAAGAGGGCCAATATGACAAATCATCGATaGTTCTTAGCATGGAGCCAAGAAGCCTGCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FASKRANMTNHR*FLAWSQEACLL Trigger: AAGGAGGCAGGCTTCTTGGCTCCATGCTAAGAATCATCGATGATTTGTCATATTGGCCCTCTTGCTGGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483485.5 |
||
| CDS TCA 72 bp | ATACAGCTATCACTGTCTTTAAGTGGAAAACATCACTaGATCACCAAGCATCGTGAGTGGGAGAGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: IQLSLSLSGKHH*ITKHREWESSS Trigger: GCTGCTGCTCTCCCACTCACGATGCTTGGTGATTCAGTGATGTTTTCCACTTAAAGACAGTGATAGCTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484809.1 ENST00000606570.1 |
||
| CDS TCA 72 bp | GGTTTAATGGCTTACAGAGGGCAAAGGGCACCTGGATaGCTGAACAACACAAAAGGCAAGATTCTAAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: GLMAYRGQRAPG*LNNTKGKILKL Trigger: GAGTTTTAGAATCTTGCCTTTTGTGTTGTTCAGTCATCCAGGTGCCCTTTGCCCTCTGTAAGCCATTAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000483485.5 |
||
| CDS TCA 72 bp | TTTAAGTGGAAAACATCACTGAATCACCAAGCATCGTaGGTGGGAGAGCAGCAGCTTATGACTTGGAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: FKWKTSLNHQAS*VGEQQLMTWRT Trigger: TGTTCTCCAAGTCATAAGCTGCTGCTCTCCCACTCACGATGCTTGGTGATTCAGTGATGTTTTCCACTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484809.1 ENST00000606570.1 |
||
| CDS CCA 72 bp | AGCCAAGAAGCCTGCCTCCTTGATCAGATTTTCAGCTaGAAAGATATCCACACCTTGCCTAGTCCAATATTT | + |
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Preference number: 6 (lower is better) Translates to: SQEACLLDQIFS*KDIHTLPSPIF Trigger: AAATATTGGACTAGGCAAGGTGTGGATATCTTTCCAGCTGAAAATCTGATCAAGGAGGCAGGCTTCTTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483485.5 |
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| CDS TCA 72 bp | GTGATATGTCAAGTCTATAGTGCTTGCACTACAAGGTaGTGTTTATCAGTCCCTTGGATATCCTGGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: VICQVYSACTTR*CLSVPWISWVK Trigger: CTTCACCCAGGATATCCAAGGGACTGATAAACATCACCTTGTAGTGCAAGCACTATAGACTTGACATATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606570.1 |
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| CDS TCA 72 bp | ACCAGTGAATTATTAAAACTTGCCATATACCTGGAATaGCTCAAGTACACCAACACGGCTTTTCACGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: TSELLKLAIYLE*LKYTNTAFHGR Trigger: CCTCCCGTGAAAAGCCGTGTTGGTGTACTTGAGTCATTCCAGGTATATGGCAAGTTTTAATAATTCACTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606570.1 |
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| CDS CAA 72 bp | TCAAGTTCTGTCTTGCAGTTTTACTTGACTAAAACTTaGACCATCACCCAACCTTCTGCTGGTGCTCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: SSSVLQFYLTKT*TITQPSAGAQV Trigger: CACTTGAGCACCAGCAGAAGGTTGGGTGATGGTCAAAGTTTTAGTCAAGTAAAACTGCAAGACAGAACTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606570.1 |
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| CDS CAA 72 bp | ACTGCACCCAGCCCTTTTTCATTTCATCTACTCCTATaGCCATCAGAATTCGGCATTAATGACCCATTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TAPSPFSFHLLL*PSEFGINDPLE Trigger: TTCCAATGGGTCATTAATGCCGAATTCTGATGGCAATAGGAGTAGATGAAATGAAAAAGGGCTGGGTGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606570.1 |
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| CDS CAA 90 bp | TTTGTGACATCAAGTTCTGTCTTGCAGTTTTACTTGACTAAAACTTaGACCATCACCCAACCTTCTGCTGGTGCTCAAGTGTTCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: FVTSSSVLQFYLTKT*TITQPSAGAQVFRA Trigger: TGCTCTGAACACTTGAGCACCAGCAGAAGGTTGGGTGATGGTCAAAGTTTTAGTCAAGTAAAACTGCAAGACAGAACTTGATGTCACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606570.1 |
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| CDS CCA 72 bp | AAAAGGTTTAATGGCTTACAGAGGGCAAAGGGCACCTaGATGACTGAACAACACAAAAGGCAAGATTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: KRFNGLQRAKGT*MTEQHKRQDSK Trigger: TTTAGAATCTTGCCTTTTGTGTTGTTCAGTCATCCAGGTGCCCTTTGCCCTCTGTAAGCCATTAAACCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000483485.5 |
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| CDS CCA 72 bp | TCCTATTGCCATCAGAATTCGGCATTAATGACCCATTaGAAATTGGAACAAACCAAGAATATGCATGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: SYCHQNSALMTH*KLEQTKNMHVR Trigger: GCGGACATGCATATTCTTGGTTTGTTCCAATTTCCAATGGGTCATTAATGCCGAATTCTGATGGCAATAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606570.1 |
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| CDS CAA 72 bp | TGCCATCAGAATTCGGCATTAATGACCCATTGGAAATaGGAACAAACCAAGAATATGCATGTCCGCCCTAAT | + |
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Preference number: 6 (lower is better) Translates to: CHQNSALMTHWK*EQTKNMHVRPN Trigger: ATTAGGGCGGACATGCATATTCTTGGTTTGTTCCAATTTCCAATGGGTCATTAATGCCGAATTCTGATGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606570.1 |
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| CDS CAA 90 bp | TCCTTCATTGAATTTGTGACATCAAGTTCTGTCTTGCAGTTTTACTaGACTAAAACTTTGACCATCACCCAACCTTCTGCTGGTGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: SFIEFVTSSSVLQFY*TKTLTITQPSAGAQ Trigger: TTGAGCACCAGCAGAAGGTTGGGTGATGGTCAAAGTTTTAGTCAAGTAAAACTGCAAGACAGAACTTGATGTCACAAATTCAATGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606570.1 |
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| CDS CAA 90 bp | TACTCCTATTGCCATCAGAATTCGGCATTAATGACCCATTGGAAATaGGAACAAACCAAGAATATGCATGTCCGCCCTAATTCCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: YSYCHQNSALMTHWK*EQTKNMHVRPNSFI Trigger: AATGAAGGAATTAGGGCGGACATGCATATTCTTGGTTTGTTCCAATTTCCAATGGGTCATTAATGCCGAATTCTGATGGCAATAGGAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606570.1 |
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| CDS TCA 72 bp | CACCAGCATTATTTCCTCACATTTGTATTATCTCTGTaGCTGGGACACATCAGACATCTATTAACTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: HQHYFLTFVLSL*LGHIRHLLTVV Trigger: CACCACAGTTAATAGATGTCTGATGTGTCCCAGTCACAGAGATAATACAAATGTGAGGAAATAATGCTGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000484809.1 ENST00000606570.1 |
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| CDS TCA 72 bp | ATCCAGCAAACCCACTTCTGGGAATATAAAAGGAACTaGAATCAGTATCTCAATGGGATATCCGTACTTCCA | + |
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Preference number: 6 (lower is better) Translates to: IQQTHFWEYKRN*NQYLNGISVLP Trigger: TGGAAGTACGGATATCCCATTGAGATACTGATTTCAGTTCCTTTTATATTCCCAGAAGTGGGTTTGCTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606570.1 |
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| CDS CAA 72 bp | TCATCTACCTCCTCTAACGGTAACGGAAACGTTATTTaGTATTCTTGTCTTTGTGCTAACGCCTTGAAATCC | + |
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Preference number: 6 (lower is better) Translates to: SSTSSNGNGNVI*YSCLCANALKS Trigger: GGATTTCAAGGCGTTAGCACAAAGACAAGAATACAAAATAACGTTTCCGTTACCGTTAGAGGAGGTAGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000483485.5 |
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| CDS TCA 72 bp | TGTTCAATCTCAGCTTTAGATTATGGCACTGGTGTGTaGGAAACAACTGGTTCAACTAACTATAAGCAATAT | + |
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Preference number: 6 (lower is better) Translates to: CSISALDYGTGV*ETTGSTNYKQY Trigger: ATATTGCTTATAGTTAGTTGAACCAGTTGTTTCTCACACACCAGTGCCATAATCTAAAGCTGAGATTGAACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475716.5 |
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