Pregenerated sensors for SNX4 (Homo sapiens)
Ensembl gene IDs: ENSG00000114520Ensembl transcript IDs: ENST00000251775.9, ENST00000465505.2, ENST00000471751.5, ENST00000473417.5
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGTTACCAGTTCCTCACACTGCTGCTTCTTGGATGCTAAGTCCTaGGCAGCCATCTCCAAGTCATACTGCATAAGTTCATGTTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PVTSSSHCCFLDAKS*AAISKSYCISSCFL Trigger: CAGGAAACATGAACTTATGCAGTATGACTTGGAGATGGCTGCTCAGGACTTAGCATCCAAGAAGCAGCAGTGTGAGGAACTGGTAACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR TCA 90 bp | TTTAGTACATATATCTTACACATTGAAATGCTACATCTTATACCCTaGAATGCCATGTGTAGAGAGCCAAGCAGAGTAAATTTAGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: FSTYILHIEMLHLIP*NAMCREPSRVNLGS Trigger: TGAGCCTAAATTTACTCTGCTTGGCTCTCTACACATGGCATTTCAGGGTATAAGATGTAGCATTTCAATGTGTAAGATATATGTACTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGTTACCAGTTCCTCACACTGCTGCTTCTTGGATGCTAAGTCCTGAGCAGATCTCCAAGTCATACTaGATAAGTTCATGTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SQLPVPHTAASWMLSPEQISKSY*ISSCFL Trigger: CAGGAAACATGAACTTATGCAGTATGACTTGGAGAT...CTGCTCAGGACTTAGCATCCAAGAAGCAGCAGTGTGAGGAACTGGTAACTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR-3UTR TCA 90 bp | AAGGTCAGTAAATCTCTTGTCTGGGTTTTTCACTCTGAATGTTGCATTAAGCGCGAGTCTGCCTTCAGCTaGAACCCAGTTTCATTCACA | + |
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Preference number: 2 (lower is better) Translates to: KVSKSLVWVFHSECCIKRESAFS*NPVSFT Trigger: TGTGAATGAAACTGGGTTTCAGCTGAAGGCAGACTC...GCGCTTAATGCAACATTCAGAGTGAAAAACCCAGACAAGAGATTTACTGACCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR-3UTR CCA 90 bp | AGTTTCTTGACCAAAGAGCTTGGTAGTCATTCCCTTCAAAGAGAATGTTCTCACTTCTGCCCGTTTTTCTaGCAGAGGTGGCACAACAAT | + |
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Preference number: 2 (lower is better) Translates to: SFLTKELGSHSLQRECSHFCPFF*QRWHNN Trigger: ATTGTTGTGCCACCTCTGCCAGAAAAACGGGCAGAA...GTGAGAACATTCTCTTTGAAGGGAATGACTACCAAGCTCTTTGGTCAAGAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCTTGACCAAAGAGCTTGGTAGTCATTCCCTTCAAAGAGAATGTTCTCACGAAGAAGATGTGAGATaGCAGACTGCAGTTCATCAC | + |
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Preference number: 2 (lower is better) Translates to: SFLTKELGSHSLQRECSHEEDVR*QTAVHH Trigger: GTGATGAACTGCAGTCTGTCATCTCACATCTTCTTC...GTGAGAACATTCTCTTTGAAGGGAATGACTACCAAGCTCTTTGGTCAAGAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR-3UTR GCA 90 bp | CTTGCTAAAGCATTCCTTAGCATTGGTCCAAACTTGAATTCCCTTTTTGCACATAGTTCCTCACACTGCTaGTTCTTGGATGCTAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: LAKAFLSIGPNLNSLFAHSSSHC*FLDAKS Trigger: GGACTTAGCATCCAAGAAGCAGCAGTGTGAGGAACT...ATGTGCAAAAAGGGAATTCAAGTTTGGACCAATGCTAAGGAATGCTTTAGCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTTGGGGCACTTTGATTGAAGAGAAATTCAATTCACAGGATTACATCTTGACCATAGAGTCGATCTaGTACTCTAGCTCTGACTCG | + |
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Preference number: 2 (lower is better) Translates to: LFWGTLIEEKFNSQDYILTIESI*YSSSDS Trigger: CGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGT...CAAGATGTAATCCTGTGAATTGAATTTCTCTTCAATCAAAGTGCCCCAAAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR-3UTR CCA 90 bp | TTCACTGAAAACTCGACCATAATTCCCATGTACTTTATATACACCATAGAGTCGCCTCTCCACAAAATCTaGATCCATGTTGTCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: FTENSTIIPMYFIYTIESPLHKI*IHVVSR Trigger: TCTGCTGACAACATGGATCCAGATTTTGTGGAGAGG...CGACTCTATGGTGTATATAAAGTACATGGGAATTATGGTCGAGTTTTCAGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTTGGGGCACTTTGATTGAAGAGAAATTCAATTCACAGGATTACATCTTGACAAAGGATGGGATGTaGAGCAATCCTCAAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LFWGTLIEEKFNSQDYILTKDGM*SNPQEK Trigger: TTTCTCTTGAGGATTGCTTCACATCCCATCCTTTGT...CAAGATGTAATCCTGTGAATTGAATTTCTCTTCAATCAAAGTGCCCCAAAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR-3UTR TCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGAATTGGTTCAGAAGCGTaGCAAACAATCTGTTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRIGSEA*QTICWY Trigger: ATACCAACAGATTGTTTGTCACGCTTCTGAACCAAT...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| 3UTR-3UTR CCA 90 bp | TTCACTGAAAACTCGACCATAATTCCCATGTACTTTATATACACCATAGAGTCGTTTTTCTGGCAGAGGTaGCACAACAATATGTGGATA | + |
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Preference number: 2 (lower is better) Translates to: FTENSTIIPMYFIYTIESFFWQR*HNNMWI Trigger: TATCCACATATTGTTGTGCCACCTCTGCCAGAAAAA...CGACTCTATGGTGTATATAAAGTACATGGGAATTATGGTCGAGTTTTCAGTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR-3UTR CCA 90 bp | AGTTTCTTGACCAAAGAGCTTGGTAGTCATTCCCTTCAAAGAGAATGTTCTCACAGTAAATCTCTTGTCTaGGTTTTTCACTCTGAATGT | + |
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Preference number: 2 (lower is better) Translates to: SFLTKELGSHSLQRECSHSKSLV*VFHSEC Trigger: ACATTCAGAGTGAAAAACCCAGACAAGAGATTTACT...GTGAGAACATTCTCTTTGAAGGGAATGACTACCAAGCTCTTTGGTCAAGAAACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR-3UTR TCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTGGGGCACTTTGATTaGAGAGAAATTCAATTCACA | + |
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Preference number: 2 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRLGHFD*REIQFT Trigger: TGTGAATTGAATTTCTCTTCAATCAAAGTGCCCCAA...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| 3UTR-3UTR TCA 90 bp | TTCACTGAAAACTCGACCATAATTCCCATGTACTTTATATACACCATAGAGTCGTTGGGGCACTTTGATTaGAGAGAAATTCAATTCACA | + |
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Preference number: 2 (lower is better) Translates to: FTENSTIIPMYFIYTIESLGHFD*REIQFT Trigger: TGTGAATTGAATTTCTCTTCAATCAAAGTGCCCCAA...CGACTCTATGGTGTATATAAAGTACATGGGAATTATGGTCGAGTTTTCAGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR CCA 72 bp | CAGTCCCAGTTACCAGTTCCTCACACTGCTGCTTCTTaGATGCTAAGTCCTGAGCAGCCATCTCCAAGTCAT | + |
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Preference number: 3 (lower is better) Translates to: QSQLPVPHTAAS*MLSPEQPSPSH Trigger: ATGACTTGGAGATGGCTGCTCAGGACTTAGCATCCAAGAAGCAGCAGTGTGAGGAACTGGTAACTGGGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR TCA 72 bp | AGTTCCTCACACTGCTGCTTCTTGGATGCTAAGTCCTaGGCAGCCATCTCCAAGTCATACTGCATAAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: SSSHCCFLDAKS*AAISKSYCISS Trigger: TGAACTTATGCAGTATGACTTGGAGATGGCTGCTCAGGACTTAGCATCCAAGAAGCAGCAGTGTGAGGAACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR GCA 72 bp | ACAAAATCTGGATCCATGTTGTCAGCAGAGAGTTTATaGCAAACAAATTCTGCCCGTTTTTCTGGCAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: TKSGSMLSAESL*QTNSARFSGRG Trigger: ACCTCTGCCAGAAAAACGGGCAGAATTTGTTTGGCATAAACTCTCTGCTGACAACATGGATCCAGATTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR-3UTR CAA 90 bp | ATCTGGATCCATGTTGTCAGCAGAGAGTTTATGCCAAACAAATTCTGCCCGTTTCTGTTTTGGGGCACTTaGATTGAAGAGAAATTCAAT | + |
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Preference number: 3 (lower is better) Translates to: IWIHVVSREFMPNKFCPFLFWGT*IEEKFN Trigger: ATTGAATTTCTCTTCAATCAAAGTGCCCCAAAACAG...AAACGGGCAGAATTTGTTTGGCATAAACTCTCTGCTGACAACATGGATCCAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR-3UTR CAA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGACTTGACATTCAGTCATaGGTTCAGAAGCGTGACAAA | + |
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Preference number: 3 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRLDIQS*VQKRDK Trigger: TTTGTCACGCTTCTGAACCAATGACTGAATGTCAAG...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| 3UTR-3UTR CAA 90 bp | TTTTGTCTCTACAAAGGATGGGATGTGAAGCAATCCTCAAGAGAAAGTTTTCTAAAATCTGGATCCATGTaGTCAGCAGAGAGTTTATGC | + |
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Preference number: 3 (lower is better) Translates to: FCLYKGWDVKQSSRESFLKSGSM*SAESLC Trigger: GCATAAACTCTCTGCTGACAACATGGATCCAGATTT...TAGAAAACTTTCTCTTGAGGATTGCTTCACATCCCATCCTTTGTAGAGACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR-3UTR CAA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCCTGTTTTGGGGCACTTaGATTGAAGAGAAATTCAAT | + |
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Preference number: 3 (lower is better) Translates to: STIRQEKTTPYNRLVDLTLFWGT*IEEKFN Trigger: ATTGAATTTCTCTTCAATCAAAGTGCCCCAAAACAG...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| 3UTR TCA 72 bp | AGGATGACAATGTATCCCATTATAGATCTGAGAAGTTaGGTCTTCTTTGTTGGCAGTATAAAATTTCTGACC | + |
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Preference number: 3 (lower is better) Translates to: RMTMYPIIDLRS*VFFVGSIKFLT Trigger: GGTCAGAAATTTTATACTGCCAACAAAGAAGACTCAACTTCTCAGATCTATAATGGGATACATTGTCATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| 3UTR TCA 72 bp | TATATCTTACACATTGAAATGCTACATCTTATACCCTaGAATGCCATGTGTAGAGAGCCAAGCAGAGTAAAT | + |
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Preference number: 3 (lower is better) Translates to: YILHIEMLHLIP*NAMCREPSRVN Trigger: ATTTACTCTGCTTGGCTCTCTACACATGGCATTTCAGGGTATAAGATGTAGCATTTCAATGTGTAAGATATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CCA 90 bp | AGTTTCTTGACCAAAGAGCTTGGTAGTCATTCCCTTCAAAGAGAATGTTCTCACTCCAAGGGCGCCGGCTaGAGCTGCCGCTCGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SFLTKELGSHSLQRECSHSKGAG*SCRSGS Trigger: GGACCCCGAGCGGCAGCTCCAGCCGGCGCCCTTGGA...GTGAGAACATTCTCTTTGAAGGGAATGACTACCAAGCTCTTTGGTCAAGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR GCA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCCCCCCTCCGCTTCCTTaGCGACCGCAGCCCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: STIRQEKTTPYNRLVDLTPPPLP*RPQPPA Trigger: GGCTGGGGGCTGCGGTCGGCAAGGAAGCGGAGGGGG...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 52% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATCCAAGGGCGCCGGCTaGAGCTGCCGCTCGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRSKGAG*SCRSGS Trigger: GGACCCCGAGCGGCAGCTCCAGCCGGCGCCCTTGGA...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR GCA 90 bp | ACCATAATTCCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCCTCGGGGTCCGGAGGTaGCTGCTCCATGGCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: TIIPMYFIYTIESICYSSLGVRR*LLHGCS Trigger: ACTGCAGCCATGGAGCAGGCACCTCCGGACCCCGAG...GCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAATTATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR GCA 90 bp | TCCCAGTTACCAGTTCCTCACACTGCTGCTTCTTGGATGCTAAGTCCTGAGCAGACCAGTTCCTCACACTaGTGCTTCTTGGATGCTAAG | + |
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Preference number: 4 (lower is better) Translates to: SQLPVPHTAASWMLSPEQTSSSH*CFLDAK Trigger: CTTAGCATCCAAGAAGCAGCAGTGTGAGGAACTGGT...CTGCTCAGGACTTAGCATCCAAGAAGCAGCAGTGTGAGGAACTGGTAACTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR CCA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTGAGGTGCCTGCTCCATaGCTGCAGTTCGGCGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: INEHLDIQSLVQKRDKQSEVPAP*LQFGAA Trigger: CGCCGCGCCGAACTGCAGCCATGGAGCAGGCACCTC...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR GCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATGCCTGCTCCATGGCTaGAGTTCGGCGCGGCGAACC | + |
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Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRCLLHG*SSARRT Trigger: GGTTCGCCGCGCCGAACTGCAGCCATGGAGCAGGCA...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR GCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGAGGGTCCGGAGGTGCCTaGTCCATGGCTGCAGTTCGG | + |
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Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRGSGGA*SMAAVR Trigger: CCGAACTGCAGCCATGGAGCAGGCACCTCCGGACCC...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR GCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGACTCGGGGTCCGGAGGTaGCTGCTCCATGGCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRLGVRR*LLHGCS Trigger: ACTGCAGCCATGGAGCAGGCACCTCCGGACCCCGAG...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR TCA 90 bp | ATGCCAAACAAATTCTGCCCGTTTTTCTGGCAGAGGTGGCACAACAATATGTGGTTGGATGCTAAGTCCTaGGCAGCCATCTCCAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: MPNKFCPFFWQRWHNNMWLDAKS*AAISKS Trigger: TGACTTGGAGATGGCTGCTCAGGACTTAGCATCCAA...CCACATATTGTTGTGCCACCTCTGCCAGAAAAACGGGCAGAATTTGTTTGGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| 3UTR CAA 72 bp | CCAATCCGTCGCCTCTCCACAAAATCTGGATCCATGTaGTCAGCAGAGAGTTTATGCCAAACAAATTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PIRRLSTKSGSM*SAESLCQTNSA Trigger: GGCAGAATTTGTTTGGCATAAACTCTCTGCTGACAACATGGATCCAGATTTTGTGGAGAGGCGACGGATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR GCA 90 bp | CCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCTCTGACTCGACCATAGAGTCGATCTaGTACTCTAGCTCTGACTCG | + |
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Preference number: 4 (lower is better) Translates to: PMYFIYTIESICYSSSDSTIESI*YSSSDS Trigger: CGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGT...CGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465505.2 ENST00000471751.5 |
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| CDS-3UTR GCA 90 bp | CCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCTCTGACTCGACTGATCTGCATGACTaGATAGCTTATGAGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PMYFIYTIESICYSSSDSTDLHD*IAYEGL Trigger: GAGGCCCTCATAAGCTATGCAGTCATGCAGATCAGT...CGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR TCA 90 bp | CCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCTCTGACTCGTCTGTTAGGACACTCTaGCCATCGGTATGTTCAACT | + |
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Preference number: 4 (lower is better) Translates to: PMYFIYTIESICYSSSDSSVRTL*PSVCST Trigger: AGTTGAACATACCGATGGTCAGAGTGTCCTAACAGA...CGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465505.2 ENST00000471751.5 |
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| CDS-3UTR CCA 90 bp | CCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCTCTGACTCGCCTCTCCACAAAATCTaGATCCATGTTGTCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PMYFIYTIESICYSSSDSPLHKI*IHVVSR Trigger: TCTGCTGACAACATGGATCCAGATTTTGTGGAGAGG...CGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465505.2 ENST00000471751.5 |
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| CDS-3UTR TCA 90 bp | ATTCCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCTCTGACGAGTCTGCCTTCAGCTaGAACCCAGTTTCATTCACA | + |
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Preference number: 4 (lower is better) Translates to: IPMYFIYTIESICYSSSDESAFS*NPVSFT Trigger: TGTGAATGAAACTGGGTTTCAGCTGAAGGCAGACTC...GTCAGAGCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR TCA 90 bp | ATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCTCTGACTCGAAGTGCTCTGGAGTTTCTTaGCCAAAGAGCTTGGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: MYFIYTIESICYSSSDSKCSGVS*PKSLVV Trigger: GACTACCAAGCTCTTTGGTCAAGAAACTCCAGAGCA...CTTCGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR GCA 90 bp | TTGACCAAAGAGCTTGGTAGTCATTCCCTTCAAAGAGAATGTTCTCACAGTCCCTCAGCAGAGAGTTTATaGCAAACAAATTCTGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: LTKELGSHSLQRECSHSPSAESL*QTNSAR Trigger: ACGGGCAGAATTTGTTTGGCATAAACTCTCTGCTGA...GGGACTGTGAGAACATTCTCTTTGAAGGGAATGACTACCAAGCTCTTTGGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR GCA 90 bp | ATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCTCTGACTCGAAGACCATAGAGTCGATCTaGTACTCTAGCTCTGACTCG | + |
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Preference number: 4 (lower is better) Translates to: MYFIYTIESICYSSSDSKTIESI*YSSSDS Trigger: CGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGT...CTTCGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465505.2 ENST00000471751.5 |
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| CDS-3UTR CCA 90 bp | ATGCCAAACAAATTCTGCCCGTTTTTCTGGCAGAGGTGGCACAACAATATGTGGTTTTTCTGGCAGAGGTaGCACAACAATATGTGGATA | + |
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Preference number: 4 (lower is better) Translates to: MPNKFCPFFWQRWHNNMWFFWQR*HNNMWI Trigger: TATCCACATATTGTTGTGCCACCTCTGCCAGAAAAA...CCACATATTGTTGTGCCACCTCTGCCAGAAAAACGGGCAGAATTTGTTTGGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR CCA 90 bp | AAGGTCAGTAAATCTCTTGTCTGGGTTTTTCACTCTGAATGTTGCATTAAGCGCTTCTGCCCGTTTTTCTaGCAGAGGTGGCACAACAAT | + |
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Preference number: 4 (lower is better) Translates to: KVSKSLVWVFHSECCIKRFCPFF*QRWHNN Trigger: ATTGTTGTGCCACCTCTGCCAGAAAAACGGGCAGAA...GCGCTTAATGCAACATTCAGAGTGAAAAACCCAGACAAGAGATTTACTGACCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR CCA 90 bp | CTTGCTAAAGCATTCCTTAGCATTGGTCCAAACTTGAATTCCCTTTTTGCACATCACACTGCTGCTTCTTaGATGCTAAGTCCTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LAKAFLSIGPNLNSLFAHHTAAS*MLSPEQ Trigger: CTGCTCAGGACTTAGCATCCAAGAAGCAGCAGTGTG...ATGTGCAAAAAGGGAATTCAAGTTTGGACCAATGCTAAGGAATGCTTTAGCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR CCA 90 bp | ATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCTCTGACTCGAAGCTAGCACCTTTATTCTaGCTTCTCTCTGCTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MYFIYTIESICYSSSDSKLAPLF*LLSALE Trigger: CTCCAGAGCAGAGAGAAGCCAGAATAAAGGTGCTAG...CTTCGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR TCA 90 bp | ATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCTCTGACTCGAAGGAAGAAGATGTGAGATaGCAGACTGCAGTTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: MYFIYTIESICYSSSDSKEEDVR*QTAVHH Trigger: GTGATGAACTGCAGTCTGTCATCTCACATCTTCTTC...CTTCGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465505.2 ENST00000471751.5 |
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| CDS-3UTR TCA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTTTGGATGCTAAGTCCTaGGCAGCCATCTCCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: INEHLDIQSLVQKRDKQSLDAKS*AAISKS Trigger: TGACTTGGAGATGGCTGCTCAGGACTTAGCATCCAA...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR GCA 90 bp | ATGCCAAACAAATTCTGCCCGTTTTTCTGGCAGAGGTGGCACAACAATATGTGGATCTCCAAGTCATACTaGATAAGTTCATGTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MPNKFCPFFWQRWHNNMWISKSY*ISSCFL Trigger: CAGGAAACATGAACTTATGCAGTATGACTTGGAGAT...CCACATATTGTTGTGCCACCTCTGCCAGAAAAACGGGCAGAATTTGTTTGGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR CCA 90 bp | ACCATAATTCCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCTTCTGCCCGTTTTTCTaGCAGAGGTGGCACAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: TIIPMYFIYTIESICYSSFCPFF*QRWHNN Trigger: ATTGTTGTGCCACCTCTGCCAGAAAAACGGGCAGAA...GCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAATTATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000465505.2 ENST00000471751.5 |
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| CDS-3UTR CCA 90 bp | ATTCCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCTCTGACCCTCTCCACAAAATCTaGATCCATGTTGTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPMYFIYTIESICYSSSDPLHKI*IHVVSR Trigger: TCTGCTGACAACATGGATCCAGATTTTGTGGAGAGG...GTCAGAGCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465505.2 ENST00000471751.5 |
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| CDS-3UTR CCA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTCACACTGCTGCTTCTTaGATGCTAAGTCCTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: INEHLDIQSLVQKRDKQSHTAAS*MLSPEQ Trigger: CTGCTCAGGACTTAGCATCCAAGAAGCAGCAGTGTG...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR TCA 90 bp | TCGACCATAATTCCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTTCTGTTAGGACACTCTaGCCATCGGTATGTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: STIIPMYFIYTIESICYSSVRTL*PSVCST Trigger: AGTTGAACATACCGATGGTCAGAGTGTCCTAACAGA...AGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAATTATGGTCGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465505.2 ENST00000471751.5 |
||
| CDS-3UTR TCA 90 bp | AGTTTCTTGACCAAAGAGCTTGGTAGTCATTCCCTTCAAAGAGAATGTTCTCACACAAAGGATGGGATGTaGAGCAATCCTCAAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFLTKELGSHSLQRECSHTKDGM*SNPQEK Trigger: TTTCTCTTGAGGATTGCTTCACATCCCATCCTTTGT...GTGAGAACATTCTCTTTGAAGGGAATGACTACCAAGCTCTTTGGTCAAGAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR TCA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTGAGTCTGCCTTCAGCTaGAACCCAGTTTCATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: INEHLDIQSLVQKRDKQSESAFS*NPVSFT Trigger: TGTGAATGAAACTGGGTTTCAGCTGAAGGCAGACTC...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251775.9 |
||
| CDS-3UTR TCA 90 bp | ACCATAATTCCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCGAAGAAGATGTGAGATaGCAGACTGCAGTTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TIIPMYFIYTIESICYSSEEDVR*QTAVHH Trigger: GTGATGAACTGCAGTCTGTCATCTCACATCTTCTTC...GCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAATTATGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465505.2 ENST00000471751.5 |
||
| CDS-3UTR TCA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCTGCTCTGGAGTTTCTTaGCCAAAGAGCTTGGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: STIRQEKTTPYNRLVDLTCSGVS*PKSLVV Trigger: GACTACCAAGCTCTTTGGTCAAGAAACTCCAGAGCA...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR TCA 90 bp | TTGACCAAAGAGCTTGGTAGTCATTCCCTTCAAAGAGAATGTTCTCACAGTCCCTTGGGGCACTTTGATTaGAGAGAAATTCAATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LTKELGSHSLQRECSHSPLGHFD*REIQFT Trigger: TGTGAATTGAATTTCTCTTCAATCAAAGTGCCCCAA...GGGACTGTGAGAACATTCTCTTTGAAGGGAATGACTACCAAGCTCTTTGGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471751.5 |
||
| CDS-3UTR GCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGAACCATAGAGTCGATCTaGTACTCTAGCTCTGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRTIESI*YSSSDS Trigger: CGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGT...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
||
| CDS-3UTR GCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGAAGTTCCTCACACTGCTaGTTCTTGGATGCTAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRSSSHC*FLDAKS Trigger: GGACTTAGCATCCAAGAAGCAGCAGTGTGAGGAACT...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR GCA 90 bp | TTTTGTCTCTACAAAGGATGGGATGTGAAGCAATCCTCAAGAGAAAGTTTTCTAAGTTCCTCACACTGCTaGTTCTTGGATGCTAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FCLYKGWDVKQSSRESFLSSSHC*FLDAKS Trigger: GGACTTAGCATCCAAGAAGCAGCAGTGTGAGGAACT...TAGAAAACTTTCTCTTGAGGATTGCTTCACATCCCATCCTTTGTAGAGACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR GCA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCACCAGTTCCTCACACTaGTGCTTCTTGGATGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: STIRQEKTTPYNRLVDLTTSSSH*CFLDAK Trigger: CTTAGCATCCAAGAAGCAGCAGTGTGAGGAACTGGT...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR GCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGAACTGATCTGCATGACTaGATAGCTTATGAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRTDLHD*IAYEGL Trigger: GAGGCCCTCATAAGCTATGCAGTCATGCAGATCAGT...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
||
| CDS-3UTR CCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTCTGCCCGTTTTTCTaGCAGAGGTGGCACAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRFCPFF*QRWHNN Trigger: ATTGTTGTGCCACCTCTGCCAGAAAAACGGGCAGAA...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000251775.9 |
||
| CDS-3UTR CCA 90 bp | ATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCTCTGACTCGAAGTGTCTCTACAAAGGATaGGATGTGAAGCAATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MYFIYTIESICYSSSDSKCLYKG*DVKQSS Trigger: TGAGGATTGCTTCACATCCCATCCTTTGTAGAGACA...CTTCGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465505.2 ENST00000471751.5 |
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| CDS-3UTR CCA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCCTAGCACCTTTATTCTaGCTTCTCTCTGCTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: STIRQEKTTPYNRLVDLTLAPLF*LLSALE Trigger: CTCCAGAGCAGAGAGAAGCCAGAATAAAGGTGCTAG...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
||
| CDS-3UTR TCA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTTCTGTTAGGACACTCTaGCCATCGGTATGTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: INEHLDIQSLVQKRDKQSSVRTL*PSVCST Trigger: AGTTGAACATACCGATGGTCAGAGTGTCCTAACAGA...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR TCA 90 bp | TCGACCATAATTCCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTACAAAGGATGGGATGTaGAGCAATCCTCAAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: STIIPMYFIYTIESICYSTKDGM*SNPQEK Trigger: TTTCTCTTGAGGATTGCTTCACATCCCATCCTTTGT...AGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAATTATGGTCGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465505.2 ENST00000471751.5 |
||
| CDS-3UTR TCA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCGAAGAAGATGTGAGATaGCAGACTGCAGTTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: STIRQEKTTPYNRLVDLTEEDVR*QTAVHH Trigger: GTGATGAACTGCAGTCTGTCATCTCACATCTTCTTC...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR GCA 90 bp | TCGACCATAATTCCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTTCAGCAGAGAGTTTATaGCAAACAAATTCTGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: STIIPMYFIYTIESICYSSAESL*QTNSAR Trigger: ACGGGCAGAATTTGTTTGGCATAAACTCTCTGCTGA...AGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAATTATGGTCGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465505.2 ENST00000471751.5 |
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| CDS-3UTR CCA 90 bp | ATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGCTCTGACTCGAAGTTTTTCTGGCAGAGGTaGCACAACAATATGTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: MYFIYTIESICYSSSDSKFFWQR*HNNMWI Trigger: TATCCACATATTGTTGTGCCACCTCTGCCAGAAAAA...CTTCGAGTCAGAGCTAGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000465505.2 ENST00000471751.5 |
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| CDS-3UTR CCA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCCCTCTCCACAAAATCTaGATCCATGTTGTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: STIRQEKTTPYNRLVDLTPLHKI*IHVVSR Trigger: TCTGCTGACAACATGGATCCAGATTTTGTGGAGAGG...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR TCA 90 bp | CTCGACCATAATTCCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCCTGACCTTGTTTCAATaGGGTAAGCAGTATATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LDHNSHVLYIHHRVDLLLLTLFQ*GKQYMF Trigger: AAACATATACTGCTTACCTCATTGAAACAAGGTCAG...GAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAATTATGGTCGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465505.2 |
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| CDS-3UTR TCA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCACAAAGGATGGGATGTaGAGCAATCCTCAAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: STIRQEKTTPYNRLVDLTTKDGM*SNPQEK Trigger: TTTCTCTTGAGGATTGCTTCACATCCCATCCTTTGT...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR TCA 90 bp | TCGACCATAATTCCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTGCATTGGTCCAAACTTaGATTCCCTTTTTGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: STIIPMYFIYTIESICYSALVQT*IPFLHI Trigger: TATGTGCAAAAAGGGAATTCAAGTTTGGACCAATGC...AGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAATTATGGTCGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR TCA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCCTACATCTTATACCCTaGAATGCCATGTGTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: STIRQEKTTPYNRLVDLTLHLIP*NAMCRE Trigger: CTCTCTACACATGGCATTTCAGGGTATAAGATGTAG...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR TCA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCGCAAAGCTAGCAAAATaGAGATGCTTGCCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: STIRQEKTTPYNRLVDLTAKLAK*RCLPSE Trigger: TTCAGAAGGCAAGCATCTTCATTTTGCTAGCTTTGC...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR GCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATCAGCAGAGAGTTTATaGCAAACAAATTCTGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRSAESL*QTNSAR Trigger: ACGGGCAGAATTTGTTTGGCATAAACTCTCTGCTGA...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CCA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCTGTCTCTACAAAGGATaGGATGTGAAGCAATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: STIRQEKTTPYNRLVDLTCLYKG*DVKQSS Trigger: TGAGGATTGCTTCACATCCCATCCTTTGTAGAGACA...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CCA 90 bp | TTTTGTCTCTACAAAGGATGGGATGTGAAGCAATCCTCAAGAGAAAGTTTTCTATGTCTCTACAAAGGATaGGATGTGAAGCAATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FCLYKGWDVKQSSRESFLCLYKG*DVKQSS Trigger: TGAGGATTGCTTCACATCCCATCCTTTGTAGAGACA...TAGAAAACTTTCTCTTGAGGATTGCTTCACATCCCATCCTTTGTAGAGACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR TCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGAGCATTGGTCCAAACTTaGATTCCCTTTTTGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRALVQT*IPFLHI Trigger: TATGTGCAAAAAGGGAATTCAAGTTTGGACCAATGC...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000251775.9 |
||
| CDS-3UTR TCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGAATAGATCTGAGAAGTTaGGTCTTCTTTGTTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRIDLRS*VFFVGS Trigger: ACTGCCAACAAAGAAGACTCAACTTCTCAGATCTAT...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CCA 90 bp | TCGACCATAATTCCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTTTTCTTGCATGTTCATaGCATTTCTTCCAGTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: STIIPMYFIYTIESICYSFLACS*HFFQFV Trigger: AACGAACTGGAAGAAATGCCATGAACATGCAAGAAA...AGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAATTATGGTCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465505.2 |
||
| CDS-3UTR CCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTTTTCTGGCAGAGGTaGCACAACAATATGTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRFFWQR*HNNMWI Trigger: TATCCACATATTGTTGTGCCACCTCTGCCAGAAAAA...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000251775.9 |
||
| CDS-3UTR TCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGACTGACCTTGTTTCAATaGGGTAAGCAGTATATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRLTLFQ*GKQYMF Trigger: AAACATATACTGCTTACCTCATTGAAACAAGGTCAG...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
||
| CDS-3UTR TCA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCACATCAAGTTTCTGCTaGGCTTTGTCAAACCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: STIRQEKTTPYNRLVDLTTSSFC*ALSNQI Trigger: TATTTGGTTTGACAAAGCTCAGCAGAAACTTGATGT...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
||
| CDS-3UTR TCA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCAAGATGCTTGCCTTCTaGACATATACTACAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: STIRQEKTTPYNRLVDLTKMLAF*TYTTNT Trigger: TGTGTTTGTAGTATATGTTCAGAAGGCAAGCATCTT...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
||
| CDS-3UTR GCA 90 bp | TCGACCATAATTCCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTGCAGTATATGTTTCTTaGATGTTCATGGCATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: STIIPMYFIYTIESICYSAVYVS*MFMAFL Trigger: AAGAAATGCCATGAACATGCAAGAAACATATACTGC...AGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAATTATGGTCGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465505.2 |
||
| CDS-3UTR GCA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTATCTCCAAGTCATACTaGATAAGTTCATGTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: INEHLDIQSLVQKRDKQSISKSY*ISSCFL Trigger: CAGGAAACATGAACTTATGCAGTATGACTTGGAGAT...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251775.9 |
||
| CDS-3UTR GCA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTGCATTTTCTAGTGTATaGAAACATTACAAGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: INEHLDIQSLVQKRDKQSAFSSV*KHYKGH Trigger: ATGCCCCTTGTAATGTTTGCATACACTAGAAAATGC...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251775.9 |
||
| CDS-3UTR CCA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTTTTCTTGCATGTTCATaGCATTTCTTCCAGTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: INEHLDIQSLVQKRDKQSFLACS*HFFQFV Trigger: AACGAACTGGAAGAAATGCCATGAACATGCAAGAAA...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CCA 90 bp | TCGACCATAATTCCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAGTAAATCTCTTGTCTaGGTTTTTCACTCTGAATGT | + |
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Preference number: 4 (lower is better) Translates to: STIIPMYFIYTIESICYSSKSLV*VFHSEC Trigger: ACATTCAGAGTGAAAAACCCAGACAAGAGATTTACT...AGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAATTATGGTCGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR GCA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTGCAGTATATGTTTCTTaGATGTTCATGGCATTTCTT | + |
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Preference number: 4 (lower is better) Translates to: INEHLDIQSLVQKRDKQSAVYVS*MFMAFL Trigger: AAGAAATGCCATGAACATGCAAGAAACATATACTGC...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR GCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTCAATATCAGCCCATaGGTTTTTCACAAATTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRFNISP*VFHKFS Trigger: AGAGAATTTGTGAAAAACGCATGGGCTGATATTGAA...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR GCA 90 bp | TTCACTGAAAACTCGACCATAATTCCCATGTACTTTATATACACCATAGAGTCGTTCAATATCAGCCCATaGGTTTTTCACAAATTCTCT | + |
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Preference number: 4 (lower is better) Translates to: FTENSTIIPMYFIYTIESFNISP*VFHKFS Trigger: AGAGAATTTGTGAAAAACGCATGGGCTGATATTGAA...CGACTCTATGGTGTATATAAAGTACATGGGAATTATGGTCGAGTTTTCAGTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR GCA 90 bp | GTCAAACCAAATAGCTCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGACAAAATGAAGATGCTTaGCTTCTGAACATATACTAC | + |
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Preference number: 4 (lower is better) Translates to: VKPNSSTIRQEKTTPYNRQNEDA*LLNIYY Trigger: GTAGTATATGTTCAGAAGGCAAGCATCTTCATTTTG...TCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGAGCTATTTGGTTTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CCA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTAGTAAATCTCTTGTCTaGGTTTTTCACTCTGAATGT | + |
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Preference number: 4 (lower is better) Translates to: INEHLDIQSLVQKRDKQSSKSLV*VFHSEC Trigger: ACATTCAGAGTGAAAAACCCAGACAAGAGATTTACT...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| 3UTR CAA 72 bp | GAGGATGACAATGTATCCCATTATAGATCTGAGAAGTaGAGTCTTCTTTGTTGGCAGTATAAAATTTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: EDDNVSHYRSEK*SLLCWQYKISD Trigger: GTCAGAAATTTTATACTGCCAACAAAGAAGACTCAACTTCTCAGATCTATAATGGGATACATTGTCATCCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CAA 90 bp | TCAACAACTCAAATTCACTATATCGCCGCCATAGTGAGTCTGTTAGGACACTCTCTGCTCTGGAGTTTCTaGACCAAAGAGCTTGGTAGT | + |
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Preference number: 5 (lower is better) Translates to: STTQIHYIAAIVSLLGHSLLWSF*TKELGS Trigger: ACTACCAAGCTCTTTGGTCAAGAAACTCCAGAGCAG...AGAGTGTCCTAACAGACTCACTATGGCGGCGATATAGTGAATTTGAGTTGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR CAA 90 bp | TTGACCAAAGAGCTTGGTAGTCATTCCCTTCAAAGAGAATGTTCTCACAGTCCCCGGTTCTTTTGTTCTTaGAAGCGTTCAATATCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LTKELGSHSLQRECSHSPRFFCS*KRSISA Trigger: GGCTGATATTGAACGCTTCAAAGAACAAAAGAACCG...GGGACTGTGAGAACATTCTCTTTGAAGGGAATGACTACCAAGCTCTTTGGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR CAA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTCTGCTCTGGAGTTTCTaGACCAAAGAGCTTGGTAGT | + |
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Preference number: 5 (lower is better) Translates to: INEHLDIQSLVQKRDKQSLLWSF*TKELGS Trigger: ACTACCAAGCTCTTTGGTCAAGAAACTCCAGAGCAG...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CAA 90 bp | AGAGAAAGTTTTCTAAACCAATCCGTCGCCTCTCCACAAAATCTGGATCCATGTAGCATTGGTCCAAACTaGAATTCCCTTTTTGCACAT | + |
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Preference number: 5 (lower is better) Translates to: RESFLNQSVASPQNLDPCSIGPN*NSLFAH Trigger: ATGTGCAAAAAGGGAATTCAAGTTTGGACCAATGCT...ACATGGATCCAGATTTTGTGGAGAGGCGACGGATTGGTTTAGAAAACTTTCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR CAA 90 bp | TCGACCATAATTCCCATGTACTTTATATACACCATAGAGTCGATCTGCTACTCTAAATCTGGATCCATGTaGTCAGCAGAGAGTTTATGC | + |
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Preference number: 5 (lower is better) Translates to: STIIPMYFIYTIESICYSKSGSM*SAESLC Trigger: GCATAAACTCTCTGCTGACAACATGGATCCAGATTT...AGAGTAGCAGATCGACTCTATGGTGTATATAAAGTACATGGGAATTATGGTCGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465505.2 ENST00000471751.5 |
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| CDS-3UTR CAA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCAAATCTGGATCCATGTaGTCAGCAGAGAGTTTATGC | + |
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Preference number: 5 (lower is better) Translates to: STIRQEKTTPYNRLVDLTKSGSM*SAESLC Trigger: GCATAAACTCTCTGCTGACAACATGGATCCAGATTT...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CAA 90 bp | ATTTTGTCTCTACAAAGGATGGGATGTGAAGCAATCCTCAAGAGAAAGTTTTCTAAATCTGGATCCATGTaGTCAGCAGAGAGTTTATGC | + |
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Preference number: 5 (lower is better) Translates to: ILSLQRMGCEAILKRKFSKSGSM*SAESLC Trigger: GCATAAACTCTCTGCTGACAACATGGATCCAGATTT...AGAAAACTTTCTCTTGAGGATTGCTTCACATCCCATCCTTTGTAGAGACAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS-3UTR CAA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTAGGTCAGTAAATCTCTaGTCTGGGTTTTTCACTCTG | + |
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Preference number: 5 (lower is better) Translates to: INEHLDIQSLVQKRDKQSRSVNL*SGFFTL Trigger: CAGAGTGAAAAACCCAGACAAGAGATTTACTGACCT...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CAA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTCGGTTCTTTTGTTCTTaGAAGCGTTCAATATCAGCC | + |
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Preference number: 5 (lower is better) Translates to: INEHLDIQSLVQKRDKQSRFFCS*KRSISA Trigger: GGCTGATATTGAACGCTTCAAAGAACAAAAGAACCG...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CAA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCCTTGACATTCAGTCATaGGTTCAGAAGCGTGACAAA | + |
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Preference number: 5 (lower is better) Translates to: STIRQEKTTPYNRLVDLTLDIQS*VQKRDK Trigger: TTTGTCACGCTTCTGAACCAATGACTGAATGTCAAG...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CAA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTTTCAACCAAAAATTATaGTGTGTCATCGTGTCGACC | + |
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Preference number: 5 (lower is better) Translates to: INEHLDIQSLVQKRDKQSFNQKL*CVIVST Trigger: GGTCGACACGATGACACACAATAATTTTTGGTTGAA...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CAA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCAGCATTGGTCCAAACTaGAATTCCCTTTTTGCACAT | + |
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Preference number: 5 (lower is better) Translates to: STIRQEKTTPYNRLVDLTSIGPN*NSLFAH Trigger: ATGTGCAAAAAGGGAATTCAAGTTTGGACCAATGCT...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CAA 90 bp | TCAACTATAAGGCAAGAGAAAACAACTCCCTATAACAGATTAGTGGATCTTACCTATAGATCTGAGAAGTaGAGTCTTCTTTGTTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: STIRQEKTTPYNRLVDLTYRSEK*SLLCWQ Trigger: CTGCCAACAAAGAAGACTCAACTTCTCAGATCTATA...GGTAAGATCCACTAATCTGTTATAGGGAGTTGTTTTCTCTTGCCTTATAGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CAA 90 bp | ATTAACGAACATCTTGACATTCAGTCATTGGTTCAGAAGCGTGACAAACAATCTCTGTTTTGGGGCACTTaGATTGAAGAGAAATTCAAT | + |
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Preference number: 5 (lower is better) Translates to: INEHLDIQSLVQKRDKQSLFWGT*IEEKFN Trigger: ATTGAATTTCTCTTCAATCAAAGTGCCCCAAAACAG...AGATTGTTTGTCACGCTTCTGAACCAATGACTGAATGTCAAGATGTTCGTTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS-3UTR CAA 90 bp | ATTTTGTCTCTACAAAGGATGGGATGTGAAGCAATCCTCAAGAGAAAGTTTTCTCTGTTTTGGGGCACTTaGATTGAAGAGAAATTCAAT | + |
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Preference number: 5 (lower is better) Translates to: ILSLQRMGCEAILKRKFSLFWGT*IEEKFN Trigger: ATTGAATTTCTCTTCAATCAAAGTGCCCCAAAACAG...AGAAAACTTTCTCTTGAGGATTGCTTCACATCCCATCCTTTGTAGAGACAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS GCA 72 bp | GCCGGCTGGAGCTGCCGCTCGGGGTCCGGAGGTGCCTaGTCCATGGCTGCAGTTCGGCGCGGCGAACCCAGT | + |
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Preference number: 6 (lower is better) Translates to: AGWSCRSGSGGA*SMAAVRRGEPS Trigger: ACTGGGTTCGCCGCGCCGAACTGCAGCCATGGAGCAGGCACCTCCGGACCCCGAGCGGCAGCTCCAGCCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000251775.9 |
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| CDS TCA 72 bp | CTATATCGCCGCCATAGTGAGTCTGTTAGGACACTCTaGCCATCGGTATGTTCAACTGACCGTGTCGACCCC | + |
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Preference number: 6 (lower is better) Translates to: LYRRHSESVRTL*PSVCSTDRVDP Trigger: GGGGTCGACACGGTCAGTTGAACATACCGATGGTCAGAGTGTCCTAACAGACTCACTATGGCGGCGATATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471751.5 |
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| CDS TCA 72 bp | CTATATCGCCGCCATAGTGAGTCTGTTAGGACACTCTaGCCATCGGTATGTTCAACTGACCTTGTTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: LYRRHSESVRTL*PSVCSTDLVSM Trigger: CATTGAAACAAGGTCAGTTGAACATACCGATGGTCAGAGTGTCCTAACAGACTCACTATGGCGGCGATATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000251775.9 ENST00000465505.2 ENST00000473417.5 |
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