RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNX33 (Homo sapiens)

Ensembl gene IDs: ENSG00000173548

Ensembl transcript IDs: ENST00000308527.6, ENST00000569152.1

Found 706 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGGAGATGGTGCAGGAATGTTCCTCCCGCCCAGGCCTAGGCCCTaGCCACCGCATCCTGGCTCCGGCTCCCGTGGCCACTGCAGCTCA +
Preference number: 1 (lower is better)
Translates to: GGDGAGMFLPPRPRP*PPHPGSGSRGHCSS
Trigger: TGAGCTGCAGTGGCCACGGGAGCCGGAGCCAGGATGCGGTGGGCAGGGCCTAGGCCTGGGCGGGAGGAACATTCCTGCACCATCTCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 90 bp GGAGCTCTGCTGGATCGGTTCAGCCAGGGGCCTTCAGAGGCAGCCTaGCCCAGAGGATTGGCCCAGGGGAGGGCAGGGCCAGGAAACAGA +
Preference number: 1 (lower is better)
Translates to: GALLDRFSQGPSEAA*PRGLAQGRAGPGNR
Trigger: TCTGTTTCCTGGCCCTGCCCTCCCCTGGGCCAATCCTCTGGGCCAGGCTGCCTCTGAAGGCCCCTGGCTGAACCGATCCAGCAGAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 90 bp CGAGGCAGCTGGGTCCAGCCGAGTCGGGAACATCTGCCTGGCATGTaGCGAGGCAGGAATCGGCCATCACCAGGATGCCCCCAACACTGG +
Preference number: 1 (lower is better)
Translates to: RGSWVQPSREHLPGM*RGRNRPSPGCPQHW
Trigger: CCAGTGTTGGGGGCATCCTGGTGATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGGACCCAGCTGCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR GCA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTaGCCAGCATCCGACCCAAGGGTGCAGCAGGCCTCGGTGTCTGCT +
Preference number: 1 (lower is better)
Translates to: PSLRTPEEQACHSPG*PASDPRVQQASVSA
Trigger: AGCAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR GCA 90 bp GGGAGTCAGAGGCCTACAGGAGGGAGATGGCCTGTAGCCCCCTCCTaGAGGGGACAGGGTGATGTACGGACAGCCAGCAACATGGGAGCA +
Preference number: 1 (lower is better)
Translates to: GSQRPTGGRWPVAPS*RGQGDVRTASNMGA
Trigger: TGCTCCCATGTTGCTGGCTGTCCGTACATCACCCTGTCCCCTGCAGGAGGGGGCTACAGGCCATCTCCCTCCTGTAGGCCTCTGACTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CCA 90 bp TGTTCCCAGAGCAGGAAGCATGAGCAGGGGACTTTCCAGGCACCATaGGTTAGGAGGAGCATTCCCACCAGCCCTGCCTCGGCCTGGCCC +
Preference number: 1 (lower is better)
Translates to: CSQSRKHEQGTFQAP*VRRSIPTSPASAWP
Trigger: GGGCCAGGCCGAGGCAGGGCTGGTGGGAATGCTCCTCCTAACCCATGGTGCCTGGAAAGTCCCCTGCTCATGCTTCCTGCTCTGGGAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 90 bp GAGGAAACGAGGCAGCTGGGTCCAGCCGAGTCGGGAACATCTGCCTaGCATGTGACGAGGCAGGAATCGGCCATCACCAGGATGCCCCCA +
Preference number: 1 (lower is better)
Translates to: EETRQLGPAESGTSA*HVTRQESAITRMPP
Trigger: TGGGGGCATCCTGGTGATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGGACCCAGCTGCCTCGTTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 90 bp CCCAGGCCTGGCTCTGCTCCAGCCAGTGGTGCAGCCACGGCACAGTaGTTCATAGCCCTCCTGTGTCCAGCGGGTGAAGAGATGCAGGAT +
Preference number: 1 (lower is better)
Translates to: PRPGSAPASGAATAQ*FIALLCPAGEEMQD
Trigger: ATCCTGCATCTCTTCACCCGCTGGACACAGGAGGGCTATGAACCACTGTGCCGTGGCTGCACCACTGGCTGGAGCAGAGCCAGGCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR GCA 90 bp AAGGGAGGAAACGAGGCAGCTGGGTCCAGCCGAGTCGGGAACATCTaGCTGGCATGTGACGAGGCAGGAATCGGCCATCACCAGGATGCC +
Preference number: 1 (lower is better)
Translates to: KGGNEAAGSSRVGNI*LACDEAGIGHHQDA
Trigger: GGCATCCTGGTGATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGGACCCAGCTGCCTCGTTTCCTCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 90 bp ACCTGCTGGCCCTTCTCCATCTTCCTGCACAAGCTCCCTGGTCCCTaGTCTAGCCAACCTTCCCTGACGGCCTTGACCCTGGAAGCCCTC +
Preference number: 1 (lower is better)
Translates to: TCWPFSIFLHKLPGP*SSQPSLTALTLEAL
Trigger: GAGGGCTTCCAGGGTCAAGGCCGTCAGGGAAGGTTGGCTAGACCAGGGACCAGGGAGCTTGTGCAGGAAGATGGAGAAGGGCCAGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 90 bp TACAGGAGGGAGATGGCCTGTAGCCCCCTCCTGCAGGGGACAGGGTaGTGTACGGACAGCCAGCAACATGGGAGCAAGGGAGATCCCTTC +
Preference number: 1 (lower is better)
Translates to: YRREMACSPLLQGTG*CTDSQQHGSKGDPF
Trigger: GAAGGGATCTCCCTTGCTCCCATGTTGCTGGCTGTCCGTACATCACCCTGTCCCCTGCAGGAGGGGGCTACAGGCCATCTCCCTCCTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR TCA 90 bp TGCAGCCACGGCACAGTGGTTCATAGCCCTCCTGTGTCCAGCGGGTaGAGAGATGCAGGATCTGAGGTCTGCTTCCATCCCCAGCCCCCA +
Preference number: 1 (lower is better)
Translates to: CSHGTVVHSPPVSSG*RDAGSEVCFHPQPP
Trigger: TGGGGGCTGGGGATGGAAGCAGACCTCAGATCCTGCATCTCTTCACCCGCTGGACACAGGAGGGCTATGAACCACTGTGCCGTGGCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 90 bp TCCAGCGAGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATaGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCA +
Preference number: 1 (lower is better)
Translates to: SSEADRGQVGMESLA*LGKQAPVFFLLGFP
Trigger: TGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCTCGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CCA 90 bp AGCCAGCGTCCTCTTCAGTTTCCAATGTGGGAGCCTCCGCAGGGCTaGGTACCCAGGACGGTTTGGGGAAGAGACACAGCTTCTGAGTCC +
Preference number: 1 (lower is better)
Translates to: SQRPLQFPMWEPPQG*VPRTVWGRDTASES
Trigger: GGACTCAGAAGCTGTGTCTCTTCCCCAAACCGTCCTGGGTACCCAGCCCTGCGGAGGCTCCCACATTGGAAACTGAAGAGGACGCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR GCA 90 bp CTGACGGCCTTGACCCTGGAAGCCCTCCCTCCACCAAGTCCCCATTaGCTCCAAAGGAGAGCCAAGTCTCAACCAGTACCCTCCTCTCAT +
Preference number: 1 (lower is better)
Translates to: LTALTLEALPPPSPH*LQRRAKSQPVPSSH
Trigger: ATGAGAGGAGGGTACTGGTTGAGACTTGGCTCTCCTTTGGAGGCAATGGGGACTTGGTGGAGGGAGGGCTTCCAGGGTCAAGGCCGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 90 bp CTGTCACCGTGCAGTGCCATCTTCAGACCCTTCATCCCTCAGGGCTaGGGGGACTCACCCTACCCTCTCACCCTTCACATTTCAGCCGTT +
Preference number: 1 (lower is better)
Translates to: LSPCSAIFRPFIPQG*GDSPYPLTLHISAV
Trigger: AACGGCTGAAATGTGAAGGGTGAGAGGGTAGGGTGAGTCCCCCCAGCCCTGAGGGATGAAGGGTCTGAAGATGGCACTGCACGGTGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 90 bp CAGTCACTTTTGAGAGTCTTCTCCAGGAAGGTGTCACCAGGGATCTaGGGCCCAGGGCTTATACCTCAGCACCTTGAGTCCGAGGAGGGG +
Preference number: 1 (lower is better)
Translates to: QSLLRVFSRKVSPGI*GPGLIPQHLESEEG
Trigger: CCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCCTGGGCCCCAGATCCCTGGTGACACCTTCCTGGAGAAGACTCTCAAAAGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR TCA 90 bp AGTCATACTGCATTGACTCTGTCTGTGTCTGACCCCGACCTTCACTaGGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAG +
Preference number: 1 (lower is better)
Translates to: SHTALTLSVSDPDLH*GLLKSRHVTALGAQ
Trigger: CTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGGTCAGACACAGACAGAGTCAATGCAGTATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR TCA 90 bp ATCCAAGTCCCTCCTGAGAAAAGTATCAGACTGATGGCCTCACCCTaGGGATGGAAGGCCTGGGAGGTGGTCCCCTCTCAAGGAAGGCAC +
Preference number: 1 (lower is better)
Translates to: IQVPPEKSIRLMASP*GWKAWEVVPSQGRH
Trigger: GTGCCTTCCTTGAGAGGGGACCACCTCCCAGGCCTTCCATCCTCAGGGTGAGGCCATCAGTCTGATACTTTTCTCAGGAGGGACTTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 90 bp GATGCTTCTCCTGGATCCAAGTCCCTCCTGAGAAAAGTATCAGACTaGTGGCCTCACCCTGAGGATGGAAGGCCTGGGAGGTGGTCCCCT +
Preference number: 1 (lower is better)
Translates to: DASPGSKSLLRKVSD*WPHPEDGRPGRWSP
Trigger: AGGGGACCACCTCCCAGGCCTTCCATCCTCAGGGTGAGGCCATCAGTCTGATACTTTTCTCAGGAGGGACTTGGATCCAGGAGAAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 90 bp CCACTGCTCCCTGGGCCTCAGGCGCCCATCTGTTCAATAAGGAGCTaGACTTGGTGGTATCCAGTCATCCCAATTGCATCCCTAGACCTC +
Preference number: 1 (lower is better)
Translates to: PLLPGPQAPICSIRS*TWWYPVIPIASLDL
Trigger: GAGGTCTAGGGATGCAATTGGGATGACTGGATACCACCAAGTTCAGCTCCTTATTGAACAGATGGGCGCCTGAGGCCCAGGGAGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR GCA 90 bp CAGGTGCAGTCCAGGCACAGAGATGCTTATGACACCTTTGCTCTGTaGAAGCATGGCTTTGTGGCGGTGTGTGCCCGAGTATGTGTCACT +
Preference number: 1 (lower is better)
Translates to: QVQSRHRDAYDTFAL*KHGFVAVCARVCVT
Trigger: AGTGACACATACTCGGGCACACACCGCCACAAAGCCATGCTTGCACAGAGCAAAGGTGTCATAAGCATCTCTGTGCCTGGACTGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR GCA 90 bp GTGGTATCCAGTCATCCCAATTGCATCCCTAGACCTCAGGCTGTGTaGCTGTATGTGGTGCTTGTGACTGGCTCTACTCCCCCTTGGAGA +
Preference number: 1 (lower is better)
Translates to: VVSSHPNCIPRPQAV*LYVVLVTGSTPPWR
Trigger: TCTCCAAGGGGGAGTAGAGCCAGTCACAAGCACCACATACAGGCACACAGCCTGAGGTCTAGGGATGCAATTGGGATGACTGGATACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR GCA 90 bp TCCCTCTGGCCAAGTCTCAGTCTCTTTGTTGCGAAAGGGAATAAATaGTGCCTACTGGGGCTGCTGAGCAGATCCAGGCCACAGCTATGC +
Preference number: 1 (lower is better)
Translates to: SLWPSLSLFVAKGNK*CLLGLLSRSRPQLC
Trigger: GCATAGCTGTGGCCTGGATCTGCTCAGCAGCCCCAGTAGGCAGCATTTATTCCCTTTCGCAACAAAGAGACTGAGACTTGGCCAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 90 bp GGGAAGACAGTGCCACAGAGCCCAAGGACCCTGAGATCCTGGGTTTaGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAAT +
Preference number: 1 (lower is better)
Translates to: GKTVPQSPRTLRSWV*TCFECGELLLVNSN
Trigger: ATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAGGGTCCTTGGGCTCTGTGGCACTGTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR TCA 90 bp AAAGGAGAGCCAAGTCTCAACCAGTACCCTCCTCTCATCTGTGGATaGACAGATCCAAGAGCAAGGTCCGCTCATCCTGATCAGGGCACC +
Preference number: 1 (lower is better)
Translates to: KGEPSLNQYPPLICG*TDPRARSAHPDQGT
Trigger: GGTGCCCTGATCAGGATGAGCGGACCTTGCTCTTGGATCTGTTCATCCACAGATGAGAGGAGGGTACTGGTTGAGACTTGGCTCTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 90 bp ACTGCTCAGAGCCCCTTCTGCAGATGGCTACATGGATGGCAGAGCTaGGAAGAGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAA +
Preference number: 1 (lower is better)
Translates to: TAQSPFCRWLHGWQS*EEVKGGKFLGWVRK
Trigger: TTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCTCTTCTCAGCTCTGCCATCCATGTAGCCATCTGCAGAAGGGGCTCTGAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 90 bp ATGTTTGCATGCCTCCATAACTTTGCCCATGCTGTTCCTCTCCCCTaGAAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCAT +
Preference number: 1 (lower is better)
Translates to: MFACLHNFAHAVPLP*KSFSPMYCLAGPCH
Trigger: ATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTTTCAGGGGAGAGGAACAGCATGGGCAAAGTTATGGAGGCATGCAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CCA 90 bp TCTGTGGAAAATTTGTGCCCACCACGACCTCAGAATCTCATCCAATaGCTCTCAGGAGCAATTAGGGCTCTATCCTTCTCCTGCCCTCCG +
Preference number: 1 (lower is better)
Translates to: SVENLCPPRPQNLIQ*LSGAIRALSFSCPP
Trigger: CGGAGGGCAGGAGAAGGATAGAGCCCTAATTGCTCCTGAGAGCCATTGGATGAGATTCTGAGGTCGTGGTGGGCACAAATTTTCCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 90 bp GCCAGAGATTCCCTGTGTGAACCTAGGCAGGTCCCATCTTCCCTCTaGCCAAGTCTCAGTCTCTTTGTTGCGAAAGGGAATAAATGCTGC +
Preference number: 1 (lower is better)
Translates to: ARDSLCEPRQVPSSL*PSLSLFVAKGNKCC
Trigger: GCAGCATTTATTCCCTTTCGCAACAAAGAGACTGAGACTTGGCCAGAGGGAAGATGGGACCTGCCTAGGTTCACACAGGGAATCTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 90 bp AGGATACCAGGAGCAGGCCTGGCATTATCCCAAGACTCCACTTCCTaGTGCTTCTCCTGGATCCAAGTCCCTCCTGAGAAAAGTATCAGA +
Preference number: 1 (lower is better)
Translates to: RIPGAGLALSQDSTS*CFSWIQVPPEKSIR
Trigger: TCTGATACTTTTCTCAGGAGGGACTTGGATCCAGGAGAAGCATCAGGAAGTGGAGTCTTGGGATAATGCCAGGCCTGCTCCTGGTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR GCA 90 bp TCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTaGCCAAATGTTGCCTACTCTATGGAGTCTTCCCTGACCAGTGGA +
Preference number: 1 (lower is better)
Translates to: SPMYCLAGPCHSSKH*PNVAYSMESSLTSG
Trigger: TCCACTGGTCAGGGAAGACTCCATAGAGTAGGCAACATTTGGGCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CCA 90 bp TGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTaGGAAGACAGTGCCACAGAGCCCAAGGACCCTGAGATCCTGGGT +
Preference number: 1 (lower is better)
Translates to: CLFPLRFPIVQQEGS*EDSATEPKDPEILG
Trigger: ACCCAGGATCTCAGGGTCCTTGGGCTCTGTGGCACTGTCTTCCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR TCA 90 bp CACTGGTGCTTTGAATGGATGGCAAGGCATGTGTGGCTGTGGCTGTaGATGTGTAATAGCGTGTGGCAGTATGACTGTGTGAGCATACAG +
Preference number: 1 (lower is better)
Translates to: HWCFEWMARHVWLWL*MCNSVWQYDCVSIQ
Trigger: CTGTATGCTCACACAGTCATACTGCCACACGCTATTACACATTCACAGCCACAGCCACACATGCCTTGCCATCCATTCAAAGCACCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR GCA 90 bp CTCATCCAATGGCTCTCAGGAGCAATTAGGGCTCTATCCTTCTCCTaGCCTCCGCCTTTCTGGGATCCAAACAGAAAAAGTCATGCTTGT +
Preference number: 1 (lower is better)
Translates to: LIQWLSGAIRALSFS*PPPFWDPNRKSHAC
Trigger: ACAAGCATGACTTTTTCTGTTTGGATCCCAGAAAGGCGGAGGGCAGGAGAAGGATAGAGCCCTAATTGCTCCTGAGAGCCATTGGATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR GCA 90 bp CTGTTCAATAAGGAGCTGAACTTGGTGGTATCCAGTCATCCCAATTaGATCCCTAGACCTCAGGCTGTGTGCCTGTATGTGGTGCTTGTG +
Preference number: 1 (lower is better)
Translates to: LFNKELNLVVSSHPN*IPRPQAVCLYVVLV
Trigger: CACAAGCACCACATACAGGCACACAGCCTGAGGTCTAGGGATGCAATTGGGATGACTGGATACCACCAAGTTCAGCTCCTTATTGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 90 bp TGTGTGACTGCGTGTGCTTGTTGTGAGACTGAGCGATTACATTCGTaGGTCTGTGAGTGTGTAGACACGTGGAAGACATATGGCTCTGTC +
Preference number: 1 (lower is better)
Translates to: CVTACACCETERLHS*VCECVDTWKTYGSV
Trigger: GACAGAGCCATATGTCTTCCACGTGTCTACACACTCACAGACTCACGAATGTAATCGCTCAGTCTCACAACAAGCACACGCAGTCACACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 90 bp CTTCAAAACACTGCCCAAATGTTGCCTACTCTATGGAGTCTTCCCTaGCCAGTGGAATGCTGTGGTCCCTTCTATGAGCTTCCAGAAATC +
Preference number: 1 (lower is better)
Translates to: LQNTAQMLPTLWSLP*PVECCGPFYELPEI
Trigger: GATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGGTCAGGGAAGACTCCATAGAGTAGGCAACATTTGGGCAGTGTTTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR TCA 90 bp ATTAAGTTATGTTCCTCACTCATGTTCCTTTGTAAACGGAGCTCCTaGGTCACTGCAGCTGTCACCGTGCAGTGCCATCTTCAGACCCTT +
Preference number: 1 (lower is better)
Translates to: IKLCSSLMFLCKRSS*VTAAVTVQCHLQTL
Trigger: AAGGGTCTGAAGATGGCACTGCACGGTGACAGCTGCAGTGACTCAGGAGCTCCGTTTACAAAGGAACATGAGTGAGGAACATAACTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 90 bp TCTATGGAGTCTTCCCTGACCAGTGGAATGCTGTGGTCCCTTCTATaGGCTTCCAGAAATCCCTCACTTAAACATCAGTCATACTGCATT +
Preference number: 1 (lower is better)
Translates to: SMESSLTSGMLWSLL*ASRNPSLKHQSYCI
Trigger: AATGCAGTATGACTGATGTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGGTCAGGGAAGACTCCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp AGCCCTGGGTGCCCAGCATCCGACCCAAGGGTGCAGCAGGCCTCGGTGTCTGCTCTGACCTTCACTGACTaGCCGGCAGCCCAGGCCTTG +
Preference number: 2 (lower is better)
Translates to: SPGCPASDPRVQQASVSALTFTD*PAAQAL
Trigger: CAAGGCCTGGGCTGCCGGTCAGTCAGTGAAGGTCAG...AGCAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATGCTGGGCACCCAGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp CAGGCACCATGGGTTAGGAGGAGCATTCCCACCAGCCCTGCCTCGGCCTGGCCCCATCCGACCCAAGGGTaGAGCAGGCCTCGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: QAPWVRRSIPTSPASAWPHPTQG*SRPRCL
Trigger: CAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATG...GGGCCAGGCCGAGGCAGGGCTGGTGGGAATGCTCCTCCTAACCCATGGTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR TCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCTGGGGTACACTGCAGTaGCCAGGCCCAGGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPWGTLQ*PGPGEG
Trigger: TCCTTCCCCTGGGCCTGGTCACTGCAGTGTACCCCA...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCGCTGAGACCCTGGCCTaGCCTTCACTGACTGACCGG +
Preference number: 2 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPAETLA*PSLTDR
Trigger: CCGGTCAGTCAGTGAAGGTCAGGCCAGGGTCTCAGC...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp GGTGCAGGAATGTTCCTCCCGCCCAGGCCTAGGCCCTGCCCACCGCATCCTGGCCTGTGGGCAGGTGTGTaGCTGCGTGTGCTTGTTGTG +
Preference number: 2 (lower is better)
Translates to: GAGMFLPPRPRPCPPHPGLWAGV*LRVLVV
Trigger: CACAACAAGCACACGCAGTCACACACCTGCCCACAG...GCCAGGATGCGGTGGGCAGGGCCTAGGCCTGGGCGGGAGGAACATTCCTGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR GCA 90 bp AGGGATGGATCCACCCAGGGGTCCACAGCCGCCTCTAGCTCCTCCTGCCTGCTGAGGAGGGGAGGATGCTaGAATGGTCCCCTGCCCGAG +
Preference number: 2 (lower is better)
Translates to: RDGSTQGSTAASSSSCLLRRGGC*NGPLPE
Trigger: CTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCT...CAGCAGGCAGGAGGAGCTAGAGGCGGCTGTGGACCCCTGGGTGGATCCATCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CCA 90 bp GGTGCAGGAATGTTCCTCCCGCCCAGGCCTAGGCCCTGCCCACCGCATCCTGGCAAGCTCCCTGGTCCCTaGTCTAGCCAACCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: GAGMFLPPRPRPCPPHPGKLPGP*SSQPSL
Trigger: CAGGGAAGGTTGGCTAGACCAGGGACCAGGGAGCTT...GCCAGGATGCGGTGGGCAGGGCCTAGGCCTGGGCGGGAGGAACATTCCTGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CAA 90 bp GCATCCTGGCTCCGGCTCCCGTGGCCACTGCAGCTCAGCTCTAGCTaGAGAAGGGAGCTGCCTGGAGCTCTGCTGGATCGGTTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: ASWLRLPWPLQLSSS*RRELPGALLDRFSQ
Trigger: CTGGCTGAACCGATCCAGCAGAGCTCCAGGCAGCTCCCTTCTCAAGCTAGAGCTGAGCTGCAGTGGCCACGGGAGCCGGAGCCAGGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR TCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGCCCGAGATAAGCTaGGGGCCCAAAAGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPLPEIS*GPKSGG
Trigger: CCCTCCACTTTTGGGCCCTCAGCTTATCTCGGGCAG...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCTCCCCCAGTCACTaGTGGTATAGGGAGGTCGGG +
Preference number: 2 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRPSPSH*WYREVG
Trigger: CCCGACCTCCCTATACCAGCAGTGACTGGGGGAGGG...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CCA 90 bp TGGCTCCGGCTCCCGTGGCCACTGCAGCTCAGCTCTAGCTTGAGAAGGGAGCTGGAGGGCAGGTGGGCATaGAATCCCTCGCATGGCTGG +
Preference number: 2 (lower is better)
Translates to: WLRLPWPLQLSSSLRRELEGRWA*NPSHGW
Trigger: CCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTC...CAGCTCCCTTCTCAAGCTAGAGCTGAGCTGCAGTGGCCACGGGAGCCGGAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCCAGAGCAGGGGCCGATaGGGCCACCTGCCTCTCCCA +
Preference number: 2 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPQSRGR*GHLPLP
Trigger: TGGGAGAGGCAGGTGGCCCCATCGGCCCCTGCTCTG...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CCA 90 bp GGTGCAGGAATGTTCCTCCCGCCCAGGCCTAGGCCCTGCCCACCGCATCCTGGCTGCTCTGTGCAAGCATaGCTTTGTGGCGGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: GAGMFLPPRPRPCPPHPGCSVQA*LCGGVC
Trigger: GCACACACCGCCACAAAGCCATGCTTGCACAGAGCA...GCCAGGATGCGGTGGGCAGGGCCTAGGCCTGGGCGGGAGGAACATTCCTGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR TCA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCTGGGGTACACTGCAGTaGCCAGGCCCAGGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCWGTLQ*PGPGEG
Trigger: TCCTTCCCCTGGGCCTGGTCACTGCAGTGTACCCCA...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp TGGCTCCGGCTCCCGTGGCCACTGCAGCTCAGCTCTAGCTTGAGAAGGGAGCTGAAGGTCCGCTCATCCTaGTCAGGGCACCCCCAACAG +
Preference number: 2 (lower is better)
Translates to: WLRLPWPLQLSSSLRRELKVRSS*SGHPQQ
Trigger: CTGTTGGGGGTGCCCTGATCAGGATGAGCGGACCTT...CAGCTCCCTTCTCAAGCTAGAGCTGAGCTGCAGTGGCCACGGGAGCCGGAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR GCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCTCCCAGGCCTGGCTCTaGTCCAGCCAGTGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPSQAWL*SSQWCS
Trigger: GCTGCACCACTGGCTGGAGCAGAGCCAGGCCTGGGA...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CAA 90 bp CACAAGCTCCCTGGTCCCTGGTCTAGCCAACCTTCCCTGACGGCCTaGACCCTGGAAGCCCTCCCTCCACCAAGTCCCCATTGCCTCCAA +
Preference number: 2 (lower is better)
Translates to: HKLPGPWSSQPSLTA*TLEALPPPSPHCLQ
Trigger: TTGGAGGCAATGGGGACTTGGTGGAGGGAGGGCTTCCAGGGTCAAGGCCGTCAGGGAAGGTTGGCTAGACCAGGGACCAGGGAGCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR TCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCTATACCTCAGCACCTTaGGTCCGAGGAGGGGAGGAT +
Preference number: 2 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPYTSAP*VRGGED
Trigger: ATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATA...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCTGTCACAGCCCTGGGTaGCCAGCATCCGACCCAAGG +
Preference number: 2 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPCHSPG*PASDPR
Trigger: CCTTGGGTCGGATGCTGGGCACCCAGGGCTGTGACA...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CCA 90 bp TGGCTCCGGCTCCCGTGGCCACTGCAGCTCAGCTCTAGCTTGAGAAGGGAGCTGCAGACAGAGGGCAGGTaGGCATGGAATCCCTCGCAT +
Preference number: 2 (lower is better)
Translates to: WLRLPWPLQLSSSLRRELQTEGR*AWNPSH
Trigger: ATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG...CAGCTCCCTTCTCAAGCTAGAGCTGAGCTGCAGTGGCCACGGGAGCCGGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CCA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCCAGGGCATGGCTCCTTaGGGAGAGGAGCCACCATCT +
Preference number: 2 (lower is better)
Translates to: PAESGTSAWHVTRQESAIQGMAP*GEEPPS
Trigger: AGATGGTGGCTCCTCTCCCCAAGGAGCCATGCCCTG...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR TCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCCATCTGCCTGGCATGTaGCGAGGCAGGAATCGGCCA +
Preference number: 2 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPHLPGM*RGRNRP
Trigger: TGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATG...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR GCA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGCAGAAAGTGGGGTACACTaGAGTGACCAGGCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: PSLRTPEEQACHSPGCPAESGVH*SDQAQG
Trigger: CCCCTGGGCCTGGTCACTGCAGTGTACCCCACTTTC...TGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp GGGCTTATACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCTGTCACAGCCCTGGGTaGCCAGCATCCGACCCAAGG +
Preference number: 2 (lower is better)
Translates to: GLIPQHLESEEGRMLQWSCHSPG*PASDPR
Trigger: CCTTGGGTCGGATGCTGGGCACCCAGGGCTGTGACA...GGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGATCTTGGGAAGACAGTaGCACAGAGCCCAAGGACCC +
Preference number: 2 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRILGRQ*HRAQGP
Trigger: GGGTCCTTGGGCTCTGTGGCACTGTCTTCCCAAGAT...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCGGCTGGGTCCTCACATaGTTGGGGAGGAGATGGTGC +
Preference number: 2 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPGWVLT*LGRRWC
Trigger: GCACCATCTCCTCCCCAAGCATGTGAGGACCCAGCC...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CCA 90 bp AGGGATGGATCCACCCAGGGGTCCACAGCCGCCTCTAGCTCCTCCTGCCTGCTGGTCTTCCCTGACCAGTaGAATGCTGTGGTCCCTTCT +
Preference number: 2 (lower is better)
Translates to: RDGSTQGSTAASSSSCLLVFPDQ*NAVVPS
Trigger: AGAAGGGACCACAGCATTCCACTGGTCAGGGAAGAC...CAGCAGGCAGGAGGAGCTAGAGGCGGCTGTGGACCCCTGGGTGGATCCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGGGACAGCCAGCAACATaGGAGCAAGGGAGATCCCTT +
Preference number: 2 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRGQPAT*EQGRSL
Trigger: AAGGGATCTCCCTTGCTCCCATGTTGCTGGCTGTCC...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CAA 90 bp CCTGACGGCCTTGACCCTGGAAGCCCTCCCTCCACCAAGTCCCCATaGCCTCCAAAGGAGAGCCAAGTCTCAACCAGTACCCTCCTCTCA +
Preference number: 2 (lower is better)
Translates to: PDGLDPGSPPSTKSP*PPKESQVSTSTLLS
Trigger: TGAGAGGAGGGTACTGGTTGAGACTTGGCTCTCCTTTGGAGGCAATGGGGACTTGGTGGAGGGAGGGCTTCCAGGGTCAAGGCCGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR TCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGTCCCAGGGGCACCCATaGCTCCTTGAAAGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: LESEEGRMLQWSPARDKLSQGHP*LLESSF
Trigger: GAAGGAGCTTTCAAGGAGTCATGGGTGCCCCTGGGA...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCGCAGCAGTGGCCAGGTaGGCAAGCAAAATAGGCTCT +
Preference number: 2 (lower is better)
Translates to: PAESGTSAWHVTRQESAIAAVAR*ASKIGS
Trigger: AGAGCCTATTTTGCTTGCTCACCTGGCCACTGCTGC...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR GCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCTCTATTCTCACCCCTaGTGTGCCCCACTTCTAAGG +
Preference number: 2 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRLYSHP*CAPLLR
Trigger: CCTTAGAAGTGGGGCACAGCAGGGGTGAGAATAGAG...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGACCGAGGAGGGGAGGATaGTGCAATGGTCCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRPRRGG*CNGPLP
Trigger: GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGG...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCCTGAGGGCCCAAAAGTaGAGGGGAGTCAGAGGCCTA +
Preference number: 2 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPLRAQK*RGVRGL
Trigger: TAGGCCTCTGACTCCCCTCCACTTTTGGGCCCTCAG...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR TCA 90 bp GGGCTTATACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCTCCCAGGGGCACCCATaGCTCCTTGAAAGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: GLIPQHLESEEGRMLQWSSQGHP*LLESSF
Trigger: GAAGGAGCTTTCAAGGAGTCATGGGTGCCCCTGGGA...GGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp CCCAGAGTATCCCCTGCCCTGCTGGGTGATAAGGCCAGCCACCACTGCTCCCTGCTGTGGTCCCTTCTATaGGCTTCCAGAAATCCCTCA +
Preference number: 2 (lower is better)
Translates to: PRVSPALLGDKASHHCSLLWSLL*ASRNPS
Trigger: TGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAG...CAGGGAGCAGTGGTGGCTGGCCTTATCACCCAGCAGGGCAGGGGATACTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR GCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCGCTCAGAGCCCCTTCTaGAGATGGCTACATGGATGG +
Preference number: 2 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPAQSPF*RWLHGW
Trigger: CCATCCATGTAGCCATCTGCAGAAGGGGCTCTGAGC...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CCA 90 bp CCCAGAGTATCCCCTGCCCTGCTGGGTGATAAGGCCAGCCACCACTGCTCCCTGCCCTCCTCTCATCTGTaGATGAACAGATCCAAGAGC +
Preference number: 2 (lower is better)
Translates to: PRVSPALLGDKASHHCSLPSSHL*MNRSKS
Trigger: GCTCTTGGATCTGTTCATCCACAGATGAGAGGAGGG...CAGGGAGCAGTGGTGGCTGGCCTTATCACCCAGCAGGGCAGGGGATACTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCGCAAGCATGGCTTTGTaGCGGTGTGTGCCCGAGTAT +
Preference number: 2 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPASMAL*RCVPEY
Trigger: ATACTCGGGCACACACCGCCACAAAGCCATGCTTGC...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCTGCTTGGGGAGGAGATaGTGCAGGAATGTTCCTCCC +
Preference number: 2 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPCLGRR*CRNVPP
Trigger: GGGAGGAACATTCCTGCACCATCTCCTCCCCAAGCA...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR TCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACGGCCTCGAGGGCTCCTaGCTCTATTCTCACCCCTGC +
Preference number: 2 (lower is better)
Translates to: LRSWVWTCFECGELLLVNGLEGS*LYSHPC
Trigger: GCAGGGGTGAGAATAGAGTCAGGAGCCCTCGAGGCC...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp CTCCAAAGGAGAGCCAAGTCTCAACCAGTACCCTCCTCTCATCTGTGGATGAACAGAGACAGCACAACCTaGCGGGGAGCAGGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: LQRRAKSQPVPSSHLWMNRDSTT*RGAGAH
Trigger: GTGGGCCCCTGCTCCCCGTCAGGTTGTGCTGTCTCT...GTTCATCCACAGATGAGAGGAGGGTACTGGTTGAGACTTGGCTCTCCTTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR GCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGAGAAAGTGGGGTACACTaGAGTGACCAGGCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRESGVH*SDQAQG
Trigger: CCCCTGGGCCTGGTCACTGCAGTGTACCCCACTTTC...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR GCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGACCTGTAGCCCCCTCCTaGAGGGGACAGGGTGATGTA +
Preference number: 2 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRPVAPS*RGQGDV
Trigger: TACATCACCCTGTCCCCTGCAGGAGGGGGCTACAGG...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGGGCATGTCACAGCCCTaGGTGCCCAGCATCCGACCC +
Preference number: 2 (lower is better)
Translates to: PTTQARIPMESVPNLLGKGMSQP*VPSIRP
Trigger: GGGTCGGATGCTGGGCACCCAGGGCTGTGACATGCC...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACCCTACAGGAGGGAGATaGCCTGTAGCCCCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: LRSWVWTCFECGELLLVNPTGGR*PVAPSC
Trigger: GCAGGAGGGGGCTACAGGCCATCTCCCTCCTGTAGG...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCGTACCCAGGACGGTTTaGGGAAGAGACACAGCTTCT +
Preference number: 2 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPVPRTV*GRDTAS
Trigger: AGAAGCTGTGTCTCTTCCCCAAACCGTCCTGGGTAC...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR TCA 90 bp GCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTGGGTGGCCTGACCTTCACTaGCTGACCGGCAGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: APVFFLLGFPLCNRKDLGWPDLH*LTGSPG
Trigger: GCCTGGGCTGCCGGTCAGTCAGTGAAGGTCAGGCCA...CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp CTCCAAAGGAGAGCCAAGTCTCAACCAGTACCCTCCTCTCATCTGTGGATGAACGCTGAGACCCTGGCCTaGCCTTCACTGACTGACCGG +
Preference number: 2 (lower is better)
Translates to: LQRRAKSQPVPSSHLWMNAETLA*PSLTDR
Trigger: CCGGTCAGTCAGTGAAGGTCAGGCCAGGGTCTCAGC...GTTCATCCACAGATGAGAGGAGGGTACTGGTTGAGACTTGGCTCTCCTTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR TCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTAGAGCCCAAGGACCCTaGGATCCTGGGTTTGGACCT +
Preference number: 2 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFRAQGP*DPGFGP
Trigger: AGGTCCAAACCCAGGATCTCAGGGTCCTTGGGCTCT...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGCCCTCCCCCAGTCACTaGTGGTATAGGGAGGTCGGG +
Preference number: 2 (lower is better)
Translates to: PTTQARIPMESVPNLLGKPSPSH*WYREVG
Trigger: CCCGACCTCCCTATACCAGCAGTGACTGGGGGAGGG...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp GGGCTTATACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCTCTATTCTCACCCCTaGTGTGCCCCACTTCTAAGG +
Preference number: 2 (lower is better)
Translates to: GLIPQHLESEEGRMLQWSLYSHP*CAPLLR
Trigger: CCTTAGAAGTGGGGCACAGCAGGGGTGAGAATAGAG...GGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGCATCCGACCCAAGGGTaGAGCAGGCCTCGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: PTTQARIPMESVPNLLGKHPTQG*SRPRCL
Trigger: CAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATG...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACCCTGTAGCCCCCTCCTaGAGGGGACAGGGTGATGTA +
Preference number: 2 (lower is better)
Translates to: LRSWVWTCFECGELLLVNPVAPS*RGQGDV
Trigger: TACATCACCCTGTCCCCTGCAGGAGGGGGCTACAGG...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCTGAGGGCCCAAAAGTaGAGGGGAGTCAGAGGCCTA +
Preference number: 2 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVLRAQK*RGVRGL
Trigger: TAGGCCTCTGACTCCCCTCCACTTTTGGGCCCTCAG...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CAA 90 bp GCTCCCTGGGCCTCAGGCGCCCATCTGTTCAATAAGGAGCTGAACTaGGTGGTATCCAGTCATCCCAATTGCATCCCTAGACCTCAGGCT +
Preference number: 2 (lower is better)
Translates to: APWASGAHLFNKELN*VVSSHPNCIPRPQA
Trigger: AGCCTGAGGTCTAGGGATGCAATTGGGATGACTGGATACCACCAAGTTCAGCTCCTTATTGAACAGATGGGCGCCTGAGGCCCAGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR TCA 90 bp CCAGTGGAATGCTGTGGTCCCTTCTATGAGCTTCCAGAAATCCCTCACTTAAACGGCTCTAGGGGAGGCTaGGACCCTGGCCTGACCTTC +
Preference number: 2 (lower is better)
Translates to: PVECCGPFYELPEIPHLNGSRGG*DPGLTF
Trigger: GAAGGTCAGGCCAGGGTCTCAGCCTCCCCTAGAGCC...GTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTGGACAGCCAGCAACATaGGAGCAAGGGAGATCCCTT +
Preference number: 2 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFGQPAT*EQGRSL
Trigger: AAGGGATCTCCCTTGCTCCCATGTTGCTGGCTGTCC...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCGAGTGTGTAGACACGTaGAAGACATATGGCTCTGTC +
Preference number: 2 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPECVDT*KTYGSV
Trigger: GACAGAGCCATATGTCTTCCACGTGTCTACACACTC...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CAA 90 bp TGGGAAGACAGTGCCACAGAGCCCAAGGACCCTGAGATCCTGGGTTaGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAA +
Preference number: 2 (lower is better)
Translates to: WEDSATEPKDPEILG*DLLRVWGVIAGELK
Trigger: TTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAGGGTCCTTGGGCTCTGTGGCACTGTCTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CAA 90 bp TGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATaGTGCAACAGGAAGGATCTTGGGAAGACAGTGCCACAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: WLGKQAPVFFLLGFP*CNRKDLGKTVPQSP
Trigger: TGGGCTCTGTGGCACTGTCTTCCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTGACCTTCACTGACTaGCCGGCAGCCCAGGCCTTG +
Preference number: 2 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDLTFTD*PAAQAL
Trigger: CAAGGCCTGGGCTGCCGGTCAGTCAGTGAAGGTCAG...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CCA 90 bp AAGCTCCCTGGTCCCTGGTCTAGCCAACCTTCCCTGACGGCCTTGACCCTGGAACAGAATCTCATCCAATaGCTCTCAGGAGCAATTAGG +
Preference number: 2 (lower is better)
Translates to: KLPGPWSSQPSLTALTLEQNLIQ*LSGAIR
Trigger: CCTAATTGCTCCTGAGAGCCATTGGATGAGATTCTG...TTCCAGGGTCAAGGCCGTCAGGGAAGGTTGGCTAGACCAGGGACCAGGGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CAA 90 bp GGCACAGAGATGCTTATGACACCTTTGCTCTGTGCAAGCATGGCTTaGTGGCGGTGTGTGCCCGAGTATGTGTCACTGTGTGAGGCTATG +
Preference number: 2 (lower is better)
Translates to: GTEMLMTPLLCASMA*WRCVPEYVSLCEAM
Trigger: CATAGCCTCACACAGTGACACATACTCGGGCACACACCGCCACAAAGCCATGCTTGCACAGAGCAAAGGTGTCATAAGCATCTCTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR TCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTTCACTGAGGACTCCTaGAGAGCAGGCATGTCACAG +
Preference number: 2 (lower is better)
Translates to: LRSWVWTCFECGELLLVNFTEDS*RAGMSQ
Trigger: CTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAA...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCTTCTCACCCCTGCTGTaGCCCACTTCTAAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCFSPLL*PTSKEW
Trigger: CCACTCCTTAGAAGTGGGGCACAGCAGGGGTGAGAA...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp AAGCTCCCTGGTCCCTGGTCTAGCCAACCTTCCCTGACGGCCTTGACCCTGGAAAAAGCGTACCTAACTTaGTTGGAAAGTAAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: KLPGPWSSQPSLTALTLEKAYLT*LESKGE
Trigger: CTCTCCCTTACTTTCCAAGCAAGTTAGGTACGCTTT...TTCCAGGGTCAAGGCCGTCAGGGAAGGTTGGCTAGACCAGGGACCAGGGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR GCA 90 bp CTCCAAAGGAGAGCCAAGTCTCAACCAGTACCCTCCTCTCATCTGTGGATGAACGCTCTATCCTTCTCCTaGCCTCCGCCTTTCTGGGAT +
Preference number: 2 (lower is better)
Translates to: LQRRAKSQPVPSSHLWMNALSFS*PPPFWD
Trigger: ATCCCAGAAAGGCGGAGGGCAGGAGAAGGATAGAGC...GTTCATCCACAGATGAGAGGAGGGTACTGGTTGAGACTTGGCTCTCCTTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CCA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCTCCCCCAGTCACTGCTaGTATAGGGAGGTCGGGAAA +
Preference number: 2 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCSPSHC*YREVGK
Trigger: TTTCCCGACCTCCCTATACCAGCAGTGACTGGGGGA...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CCA 90 bp GCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTGGGTCCCCCAGTCACTGCTaGTATAGGGAGGTCGGGAAA +
Preference number: 2 (lower is better)
Translates to: APVFFLLGFPLCNRKDLGSPSHC*YREVGK
Trigger: TTTCCCGACCTCCCTATACCAGCAGTGACTGGGGGA...CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CCA 90 bp GTAGCTGTCCAGGGCAGAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGAGGCCAGAATCCCCATaGAAAGCGTACCTAACTTGC +
Preference number: 2 (lower is better)
Translates to: VAVQGRKRSLVFHPLRAKRPESP*KAYLTC
Trigger: GCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCT...CTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTCTGCCCTGGACAGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CCA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATGTGTCACCAGGGATCTaGGGCCCAGGGCTTATACCT +
Preference number: 2 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDVSPGI*GPGLIP
Trigger: AGGTATAAGCCCTGGGCCCCAGATCCCTGGTGACAC...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATGCAGCAGTGGCCAGGTaGGCAAGCAAAATAGGCTCT +
Preference number: 2 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDAAVAR*ASKIGS
Trigger: AGAGCCTATTTTGCTTGCTCACCTGGCCACTGCTGC...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGCTGTGGTCCCTTCTATaGGCTTCCAGAAATCCCTCA +
Preference number: 2 (lower is better)
Translates to: PTTQARIPMESVPNLLGKLWSLL*ASRNPS
Trigger: TGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAG...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CAA 90 bp GAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTaGAGAGTCTTCTCCAGGAAGGTGTCACCAGGGATCTGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: ECGELLLVNSNIQSL*RVFSRKVSPGIWGP
Trigger: TGGGCCCCAGATCCCTGGTGACACCTTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAATGGCCTGACCTTCACTaGCTGACCGGCAGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: VIAGELKYTVTFESLLQEWPDLH*LTGSPG
Trigger: GCCTGGGCTGCCGGTCAGTCAGTGAAGGTCAGGCCA...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAAGGCTCTAGGGGAGGCTaGGACCCTGGCCTGACCTTC +
Preference number: 2 (lower is better)
Translates to: VIAGELKYTVTFESLLQEGSRGG*DPGLTF
Trigger: GAAGGTCAGGCCAGGGTCTCAGCCTCCCCTAGAGCC...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCTCAGTCATACTGCATTaGCTCTGTCTGTGTCTGACC +
Preference number: 2 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCSVILH*LCLCLT
Trigger: GGTCAGACACAGACAGAGTCAATGCAGTATGACTGA...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGAAAGCGTACCTAACTTaGTTGGAAAGTAAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVKAYLT*LESKGE
Trigger: CTCTCCCTTACTTTCCAAGCAAGTTAGGTACGCTTT...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CCA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAAGGCATGTCACAGCCCTaGGTGCCCAGCATCCGACCC +
Preference number: 2 (lower is better)
Translates to: VIAGELKYTVTFESLLQEGMSQP*VPSIRP
Trigger: GGGTCGGATGCTGGGCACCCAGGGCTGTGACATGCC...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTCAGTCATACTGCATTaGCTCTGTCTGTGTCTGACC +
Preference number: 2 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHSVILH*LCLCLT
Trigger: GGTCAGACACAGACAGAGTCAATGCAGTATGACTGA...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR GCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCATTCTTCAAAACACTaGCCAAATGTTGCCTACTCT +
Preference number: 2 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVHSSKH*PNVAYS
Trigger: AGAGTAGGCAACATTTGGGCAGTGTTTTGAAGAATG...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CAA 90 bp ACCCTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATaGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCC +
Preference number: 2 (lower is better)
Translates to: TLRSWVWTCFECGEL*LVNSNIQSLLRVFS
Trigger: GGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR TCA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTTTCACTGAGGACTCCTaGAGAGCAGGCATGTCACAG +
Preference number: 2 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFFTEDS*RAGMSQ
Trigger: CTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAA...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CCA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAAGGGAGGATGCTGCAATaGTCCCCTGCCCGAGATAAG +
Preference number: 2 (lower is better)
Translates to: VIAGELKYTVTFESLLQEGRMLQ*SPARDK
Trigger: CTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCC...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR GCA 72 bp TCCACCCAGGGGTCCACAGCCGCCTCTAGCTCCTCCTaGCTGCTGGCACCTTCCACCAGCATAGCCCTCCCC +
Preference number: 3 (lower is better)
Translates to: STQGSTAASSSS*LLAPSTSIALP
Trigger: GGGGAGGGCTATGCTGGTGGAAGGTGCCAGCAGGCAGGAGGAGCTAGAGGCGGCTGTGGACCCCTGGGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR GCA 72 bp GGGGGACCCATTCCAGAAGTTCCTCTGAGGACGCTATaGCCTGAACAGGGAGTCCTGCCCGCCCCTTCCCCC +
Preference number: 3 (lower is better)
Translates to: GGPIPEVPLRTL*PEQGVLPAPSP
Trigger: GGGGGAAGGGGCGGGCAGGACTCCCTGTTCAGGGCATAGCGTCCTCAGAGGAACTTCTGGAATGGGTCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 72 bp TGGGTCCAGCCGAGTCGGGAACATCTGCCTGGCATGTaGCGAGGCAGGAATCGGCCATCACCAGGATGCCCC +
Preference number: 3 (lower is better)
Translates to: WVQPSREHLPGM*RGRNRPSPGCP
Trigger: GGGGCATCCTGGTGATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 72 bp TGGGAGCCTCCGCAGGGCTGGGTACCCAGGACGGTTTaGGGAAGAGACACAGCTTCTGAGTCCCCCACTTCC +
Preference number: 3 (lower is better)
Translates to: WEPPQGWVPRTV*GRDTASESPTS
Trigger: GGAAGTGGGGGACTCAGAAGCTGTGTCTCTTCCCCAAACCGTCCTGGGTACCCAGCCCTGCGGAGGCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 72 bp AGGCAGCTGGGTCCAGCCGAGTCGGGAACATCTGCCTaGCATGTGACGAGGCAGGAATCGGCCATCACCAGG +
Preference number: 3 (lower is better)
Translates to: RQLGPAESGTSA*HVTRQESAITR
Trigger: CCTGGTGATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGGACCCAGCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 72 bp GGCTCTGCTCCAGCCAGTGGTGCAGCCACGGCACAGTaGTTCATAGCCCTCCTGTGTCCAGCGGGTGAAGAG +
Preference number: 3 (lower is better)
Translates to: GSAPASGAATAQ*FIALLCPAGEE
Trigger: CTCTTCACCCGCTGGACACAGGAGGGCTATGAACCACTGTGCCGTGGCTGCACCACTGGCTGGAGCAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CAA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCTTATACCTCAGCACCTaGAGTCCGAGGAGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPLYLST*SPRRGG
Trigger: TCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAA...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR TCA 72 bp GAGATGGCCTGTAGCCCCCTCCTGCAGGGGACAGGGTaGTGTACGGACAGCCAGCAACATGGGAGCAAGGGA +
Preference number: 3 (lower is better)
Translates to: EMACSPLLQGTG*CTDSQQHGSKG
Trigger: TCCCTTGCTCCCATGTTGCTGGCTGTCCGTACATCACCCTGTCCCCTGCAGGAGGGGGCTACAGGCCATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR TCA 72 bp ACCAAGGGCCAGGGGGACCCATTCCAGAAGTTCCTCTaGGGACGCTATGCCCTGAACAGGGAGTCCTGCCCG +
Preference number: 3 (lower is better)
Translates to: TKGQGDPFQKFL*GRYALNRESCP
Trigger: CGGGCAGGACTCCCTGTTCAGGGCATAGCGTCCTCAGAGGAACTTCTGGAATGGGTCCCCCTGGCCCTTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 72 bp CCCTCCTGTGTCCAGCGGGTGAAGAGATGCAGGATCTaGGGTCTGCTTCCATCCCCAGCCCCCATCTGTGGC +
Preference number: 3 (lower is better)
Translates to: PSCVQRVKRCRI*GLLPSPAPICG
Trigger: GCCACAGATGGGGGCTGGGGATGGAAGCAGACCTCAGATCCTGCATCTCTTCACCCGCTGGACACAGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR GCA 72 bp AACGAGGCAGCTGGGTCCAGCCGAGTCGGGAACATCTaGCTGGCATGTGACGAGGCAGGAATCGGCCATCAC +
Preference number: 3 (lower is better)
Translates to: NEAAGSSRVGNI*LACDEAGIGHH
Trigger: GTGATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGGACCCAGCTGCCTCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 72 bp ACCCCCAACAGCCAGCGTCCTCTTCAGTTTCCAATGTaGGAGCCTCCGCAGGGCTGGGTACCCAGGACGGTT +
Preference number: 3 (lower is better)
Translates to: TPNSQRPLQFPM*EPPQGWVPRTV
Trigger: AACCGTCCTGGGTACCCAGCCCTGCGGAGGCTCCCACATTGGAAACTGAAGAGGACGCTGGCTGTTGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CAA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCGGCACCCATGACTCCTaGAAAGCTCCTTCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: PAESGTSAWHVTRQESAIGTHDS*KAPSPR
Trigger: CCTGGGAGAAGGAGCTTTCAAGGAGTCATGGGTGCC...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 72 bp TGTCTGTGTCTGACCCCGACCTTCACTGAGGACTCCTaGAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: CLCLTPTFTEDS*RAGMSQPWVPS
Trigger: GCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGGTCAGACACAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CCA 72 bp AGCAGGAAGCATGAGCAGGGGACTTTCCAGGCACCATaGGTTAGGAGGAGCATTCCCACCAGCCCTGCCTCG +
Preference number: 3 (lower is better)
Translates to: SRKHEQGTFQAP*VRRSIPTSPAS
Trigger: CGAGGCAGGGCTGGTGGGAATGCTCCTCCTAACCCATGGTGCCTGGAAAGTCCCCTGCTCATGCTTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CAA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCATGCCTCCATAACTTaGCCCATGCTGTTCCTCTCC +
Preference number: 3 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRHASIT*PMLFLS
Trigger: GGAGAGGAACAGCATGGGCAAAGTTATGGAGGCATG...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CCA 72 bp GCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATaGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTA +
Preference number: 3 (lower is better)
Translates to: ADRGQVGMESLA*LGKQAPVFFLL
Trigger: TAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CCA 72 bp CCTCTTCAGTTTCCAATGTGGGAGCCTCCGCAGGGCTaGGTACCCAGGACGGTTTGGGGAAGAGACACAGCT +
Preference number: 3 (lower is better)
Translates to: PLQFPMWEPPQG*VPRTVWGRDTA
Trigger: AGCTGTGTCTCTTCCCCAAACCGTCCTGGGTACCCAGCCCTGCGGAGGCTCCCACATTGGAAACTGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CAA 90 bp ACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGAGAAGAGGGAGATGTTaGCATGCCTCCATAACTTTG +
Preference number: 3 (lower is better)
Translates to: TEGRWAWNPSHGWASRPLRRGRC*HASITL
Trigger: CAAAGTTATGGAGGCATGCAAACATCTCCCTCTTCT...CAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR GCA 72 bp GTAAACGGAGCTCCTGAGTCACTGCAGCTGTCACCGTaGAGTGCCATCTTCAGACCCTTCATCCCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: VNGAPESLQLSP*SAIFRPFIPQG
Trigger: GCCCTGAGGGATGAAGGGTCTGAAGATGGCACTGCACGGTGACAGCTGCAGTGACTCAGGAGCTCCGTTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 72 bp GACCCAAGGGTGCAGCAGGCCTCGGTGTCTGCTGAATaGATAAGGCAGCAGTGGCCAGGTGAGCAAGCAAAA +
Preference number: 3 (lower is better)
Translates to: DPRVQQASVSAE*IRQQWPGEQAK
Trigger: TTTTGCTTGCTCACCTGGCCACTGCTGCCTTATCCATTCAGCAGACACCGAGGCCTGCTGCACCCTTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CCA 72 bp TGCAGTGCCATCTTCAGACCCTTCATCCCTCAGGGCTaGGGGGACTCACCCTACCCTCTCACCCTTCACATT +
Preference number: 3 (lower is better)
Translates to: CSAIFRPFIPQG*GDSPYPLTLHI
Trigger: AATGTGAAGGGTGAGAGGGTAGGGTGAGTCCCCCCAGCCCTGAGGGATGAAGGGTCTGAAGATGGCACTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CAA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGATCAGTCATACTGCATaGACTCTGTCTGTGTCTGAC +
Preference number: 3 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRISHTA*TLSVSD
Trigger: GTCAGACACAGACAGAGTCAATGCAGTATGACTGAT...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CCA 72 bp TTGAGAGTCTTCTCCAGGAAGGTGTCACCAGGGATCTaGGGCCCAGGGCTTATACCTCAGCACCTTGAGTCC +
Preference number: 3 (lower is better)
Translates to: LRVFSRKVSPGI*GPGLIPQHLES
Trigger: GGACTCAAGGTGCTGAGGTATAAGCCCTGGGCCCCAGATCCCTGGTGACACCTTCCTGGAGAAGACTCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CAA 90 bp AGGGATGGATCCACCCAGGGGTCCACAGCCGCCTCTAGCTCCTCCTGCCTGCTGAATATACAGTCACTTTaGAGAGTCTTCTCCAGGAAG +
Preference number: 3 (lower is better)
Translates to: RDGSTQGSTAASSSSCLLNIQSL*RVFSRK
Trigger: CTTCCTGGAGAAGACTCTCAAAAGTGACTGTATATT...CAGCAGGCAGGAGGAGCTAGAGGCGGCTGTGGACCCCTGGGTGGATCCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CAA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCAATATACAGTCACTTTaGAGAGTCTTCTCCAGGAAG +
Preference number: 3 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPNIQSL*RVFSRK
Trigger: CTTCCTGGAGAAGACTCTCAAAAGTGACTGTATATT...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CCA 72 bp AAGACAGTGCCACAGAGCCCAAGGACCCTGAGATCCTaGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTG +
Preference number: 3 (lower is better)
Translates to: KTVPQSPRTLRS*VWTCFECGELL
Trigger: CAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAGGGTCCTTGGGCTCTGTGGCACTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CCA 72 bp CCTGGACTAGGGCTTTTCAAGGGCAAGGCCAGGGCATaGCTCCTTGGGGAGAGGAGCCACCATCTATTAATT +
Preference number: 3 (lower is better)
Translates to: PGLGLFKGKARA*LLGERSHHLLI
Trigger: AATTAATAGATGGTGGCTCCTCTCCCCAAGGAGCCATGCCCTGGCCTTGCCCTTGAAAAGCCCTAGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CAA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGGGCACCCATGACTCCTaGAAAGCTCCTTCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: PTTQARIPMESVPNLLGKGTHDS*KAPSPR
Trigger: CCTGGGAGAAGGAGCTTTCAAGGAGTCATGGGTGCC...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CAA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTTATACCTCAGCACCTaGAGTCCGAGGAGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: LRSWVWTCFECGELLLVNLYLST*SPRRGG
Trigger: TCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAA...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CAA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGAGCAACAGGAAGGATCTaGGGAAGACAGTGCCACAGA +
Preference number: 3 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRATGRI*GRQCHR
Trigger: TCTGTGGCACTGTCTTCCCAAGATCCTTCCTGTTGC...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CAA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCCTCTTAGGTTTCCCATaGTGCAACAGGAAGGATCTT +
Preference number: 3 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPLLGFP*CNRKDL
Trigger: AAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAG...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 72 bp GGAGCAGGCCTGGCATTATCCCAAGACTCCACTTCCTaGTGCTTCTCCTGGATCCAAGTCCCTCCTGAGAAA +
Preference number: 3 (lower is better)
Translates to: GAGLALSQDSTS*CFSWIQVPPEK
Trigger: TTTCTCAGGAGGGACTTGGATCCAGGAGAAGCATCAGGAAGTGGAGTCTTGGGATAATGCCAGGCCTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 72 bp TTTGTGGCGGTGTGTGCCCGAGTATGTGTCACTGTGTaGGGCTATGACCATGTGCATAGGACTGTGGTGTGG +
Preference number: 3 (lower is better)
Translates to: FVAVCARVCVTV*GYDHVHRTVVW
Trigger: CCACACCACAGTCCTATGCACATGGTCATAGCCTCACACAGTGACACATACTCGGGCACACACCGCCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 72 bp CCTGGGCCTCAGGCGCCCATCTGTTCAATAAGGAGCTaGACTTGGTGGTATCCAGTCATCCCAATTGCATCC +
Preference number: 3 (lower is better)
Translates to: PGPQAPICSIRS*TWWYPVIPIAS
Trigger: GGATGCAATTGGGATGACTGGATACCACCAAGTTCAGCTCCTTATTGAACAGATGGGCGCCTGAGGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR GCA 72 bp AGTCATCCCAATTGCATCCCTAGACCTCAGGCTGTGTaGCTGTATGTGGTGCTTGTGACTGGCTCTACTCCC +
Preference number: 3 (lower is better)
Translates to: SHPNCIPRPQAV*LYVVLVTGSTP
Trigger: GGGAGTAGAGCCAGTCACAAGCACCACATACAGGCACACAGCCTGAGGTCTAGGGATGCAATTGGGATGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 72 bp CCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTaGGAAGACAGTGCCACAGAGCCCAAGGACCCTGAG +
Preference number: 3 (lower is better)
Translates to: PLRFPIVQQEGS*EDSATEPKDPE
Trigger: CTCAGGGTCCTTGGGCTCTGTGGCACTGTCTTCCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR GCA 72 bp CCAAGTCTCAGTCTCTTTGTTGCGAAAGGGAATAAATaGTGCCTACTGGGGCTGCTGAGCAGATCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: PSLSLFVAKGNK*CLLGLLSRSRP
Trigger: TGGCCTGGATCTGCTCAGCAGCCCCAGTAGGCAGCATTTATTCCCTTTCGCAACAAAGAGACTGAGACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 72 bp TCCCTGTGTGAACCTAGGCAGGTCCCATCTTCCCTCTaGCCAAGTCTCAGTCTCTTTGTTGCGAAAGGGAAT +
Preference number: 3 (lower is better)
Translates to: SLCEPRQVPSSL*PSLSLFVAKGN
Trigger: ATTCCCTTTCGCAACAAAGAGACTGAGACTTGGCCAGAGGGAAGATGGGACCTGCCTAGGTTCACACAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CAA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCCTGAGATCCTGGGTTaGGACCTGCTTCGAGTGTGG +
Preference number: 3 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDPEILG*DLLRVW
Trigger: CCACACTCGAAGCAGGTCCAAACCCAGGATCTCAGG...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR TCA 72 bp CCAAGTCTCAACCAGTACCCTCCTCTCATCTGTGGATaGACAGATCCAAGAGCAAGGTCCGCTCATCCTGAT +
Preference number: 3 (lower is better)
Translates to: PSLNQYPPLICG*TDPRARSAHPD
Trigger: ATCAGGATGAGCGGACCTTGCTCTTGGATCTGTTCATCCACAGATGAGAGGAGGGTACTGGTTGAGACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR TCA 72 bp TGTTCCTCACTCATGTTCCTTTGTAAACGGAGCTCCTaGGTCACTGCAGCTGTCACCGTGCAGTGCCATCTT +
Preference number: 3 (lower is better)
Translates to: CSSLMFLCKRSS*VTAAVTVQCHL
Trigger: AAGATGGCACTGCACGGTGACAGCTGCAGTGACTCAGGAGCTCCGTTTACAAAGGAACATGAGTGAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR GCA 72 bp TGGCTCTCAGGAGCAATTAGGGCTCTATCCTTCTCCTaGCCTCCGCCTTTCTGGGATCCAAACAGAAAAAGT +
Preference number: 3 (lower is better)
Translates to: WLSGAIRALSFS*PPPFWDPNRKS
Trigger: ACTTTTTCTGTTTGGATCCCAGAAAGGCGGAGGGCAGGAGAAGGATAGAGCCCTAATTGCTCCTGAGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR GCA 72 bp AAGGAGCTGAACTTGGTGGTATCCAGTCATCCCAATTaGATCCCTAGACCTCAGGCTGTGTGCCTGTATGTG +
Preference number: 3 (lower is better)
Translates to: KELNLVVSSHPN*IPRPQAVCLYV
Trigger: CACATACAGGCACACAGCCTGAGGTCTAGGGATGCAATTGGGATGACTGGATACCACCAAGTTCAGCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CAA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTGAGTGTGGGGAGTTATaGCTGGTGAACTCAAATATA +
Preference number: 3 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFECGEL*LVNSNI
Trigger: TATATTTGAGTTCACCAGCAATAACTCCCCACACTC...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR TCA 72 bp AAACATCAGTCATACTGCATTGACTCTGTCTGTGTCTaGCCCCGACCTTCACTGAGGACTCCTGAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: KHQSYCIDSVCV*PRPSLRTPEEQ
Trigger: CTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGGTCAGACACAGACAGAGTCAATGCAGTATGACTGATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CCA 72 bp GACCCTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTaGGGAGTTATTGCTGGTGAACTCAAATATACAGTC +
Preference number: 3 (lower is better)
Translates to: DPEILGLDLLRV*GVIAGELKYTV
Trigger: GACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR-3UTR CAA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGAGAAGAGGGAGATGTTaGCATGCCTCCATAACTTTG +
Preference number: 3 (lower is better)
Translates to: PTTQARIPMESVPNLLGKRRGRC*HASITL
Trigger: CAAAGTTATGGAGGCATGCAAACATCTCCCTCTTCT...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR TCA 72 bp TTTGAATGGATGGCAAGGCATGTGTGGCTGTGGCTGTaGATGTGTAATAGCGTGTGGCAGTATGACTGTGTG +
Preference number: 3 (lower is better)
Translates to: FEWMARHVWLWL*MCNSVWQYDCV
Trigger: CACACAGTCATACTGCCACACGCTATTACACATTCACAGCCACAGCCACACATGCCTTGCCATCCATTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR-3UTR CAA 90 bp AGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTATCAGTCATACTGCATaGACTCTGTCTGTGTCTGAC +
Preference number: 3 (lower is better)
Translates to: SPSPPCTVWQALVILQNTISHTA*TLSVSD
Trigger: GTCAGACACAGACAGAGTCAATGCAGTATGACTGAT...AGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR TCA 72 bp TCTTCCCTGACCAGTGGAATGCTGTGGTCCCTTCTATaGGCTTCCAGAAATCCCTCACTTAAACATCAGTCA +
Preference number: 3 (lower is better)
Translates to: SSLTSGMLWSLL*ASRNPSLKHQS
Trigger: TGACTGATGTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGGTCAGGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR TCA 72 bp GCGTGTGCTTGTTGTGAGACTGAGCGATTACATTCGTaGGTCTGTGAGTGTGTAGACACGTGGAAGACATAT +
Preference number: 3 (lower is better)
Translates to: ACACCETERLHS*VCECVDTWKTY
Trigger: ATATGTCTTCCACGTGTCTACACACTCACAGACTCACGAATGTAATCGCTCAGTCTCACAACAAGCACACGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CCA 72 bp GGAATGCAGGTAAATATTAATATGTATGATAGAGTGTaGGATTCAGCCTTTAAAATGCAAAGCTCCCTAAGG +
Preference number: 3 (lower is better)
Translates to: GMQVNINMYDRV*DSAFKMQSSLR
Trigger: CCTTAGGGAGCTTTGCATTTTAAAGGCTGAATCCCACACTCTATCATACATATTAATATTTACCTGCATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GGTGCAGGAATGTTCCTCCCGCCCAGGCCTAGGCCCTGCCCACCGCATCCTGGCGGGGAGGGTGCCCGTTaGTGCCCAGCCCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: GAGMFLPPRPRPCPPHPGGEGAR*CPAHQP
Trigger: GGGCTGGTGGGCTGGGCACCAACGGGCACCCTCCCC...GCCAGGATGCGGTGGGCAGGGCCTAGGCCTGGGCGGGAGGAACATTCCTGCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CAGGCACCATGGGTTAGGAGGAGCATTCCCACCAGCCCTGCCTCGGCCTGGCCCCCCAGGCCTAGGCCCTaGCCACCGCATCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: QAPWVRRSIPTSPASAWPPRPRP*PPHPGS
Trigger: GGAGCCAGGATGCGGTGGGCAGGGCCTAGGCCTGGG...GGGCCAGGCCGAGGCAGGGCTGGTGGGAATGCTCCTCCTAACCCATGGTGCCTG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGTGGCTCCTGGAGGCCTaGGTCAGCGGGCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRWLLEA*VSGQAG
Trigger: GCCCGCCTGCCCGCTGACTCAGGCCTCCAGGAGCCA...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GGTGCAGGAATGTTCCTCCCGCCCAGGCCTAGGCCCTGCCCACCGCATCCTGGCGGCATGTCACAGCCCTaGGTGCCCAGCATCCGACCC +
Preference number: 4 (lower is better)
Translates to: GAGMFLPPRPRPCPPHPGGMSQP*VPSIRP
Trigger: GGGTCGGATGCTGGGCACCCAGGGCTGTGACATGCC...GCCAGGATGCGGTGGGCAGGGCCTAGGCCTGGGCGGGAGGAACATTCCTGCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp TCTCCCAGGAGGCAGGACAGGCCGCTTATCTCCCCCACCGCTGACCCCTCCCCCCCCAGAGCCAGGCTCTaGCCCCAGAGTATCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SPRRQDRPLISPTADPSPPRARL*PQSIPC
Trigger: GCAGGGGATACTCTGGGGCCAGAGCCTGGCTCTGGG...GGGGGAGGGGTCAGCGGTGGGGGAGATAAGCGGCCTGTCCTGCCTCCTGGGAGA
69% GC, longest homopolymer 8 nt, total homopolymer stretches 25 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GGTGCAGGAATGTTCCTCCCGCCCAGGCCTAGGCCCTGCCCACCGCATCCTGGCGGCCTCGAGGGCTCCTaGCTCTATTCTCACCCCTGC +
Preference number: 4 (lower is better)
Translates to: GAGMFLPPRPRPCPPHPGGLEGS*LYSHPC
Trigger: GCAGGGGTGAGAATAGAGTCAGGAGCCCTCGAGGCC...GCCAGGATGCGGTGGGCAGGGCCTAGGCCTGGGCGGGAGGAACATTCCTGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AGCCCTGGGTGCCCAGCATCCGACCCAAGGGTGCAGCAGGCCTCGGTGTCTGCTTGGCCTGACCTTCACTaGCTGACCGGCAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SPGCPASDPRVQQASVSAWPDLH*LTGSPG
Trigger: GCCTGGGCTGCCGGTCAGTCAGTGAAGGTCAGGCCA...AGCAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATGCTGGGCACCCAGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCCACGCGGCAGCGCCTaGGAATGCCGTCTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPPRGSA*ECRLPR
Trigger: ACGAGGCAGACGGCATTCGCAGGCGCTGCCGCGTGG...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GGTGCAGGAATGTTCCTCCCGCCCAGGCCTAGGCCCTGCCCACCGCATCCTGGCGCTCCAGTGGTGGCTTaGGCCGGAAGGCCATGTGCT +
Preference number: 4 (lower is better)
Translates to: GAGMFLPPRPRPCPPHPGAPVVA*AGRPCA
Trigger: AGCACATGGCCTTCCGGCCCAAGCCACCACTGGAGC...GCCAGGATGCGGTGGGCAGGGCCTAGGCCTGGGCGGGAGGAACATTCCTGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GGTGCAGGAATGTTCCTCCCGCCCAGGCCTAGGCCCTGCCCACCGCATCCTGGCCGGCGCTGGTGGAAGTaGTTCATCTCGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GAGMFLPPRPRPCPPHPGRRWWK*FISACR
Trigger: CCTGCAGGCCGAGATGAACCACTTCCACCAGCGCCG...GCCAGGATGCGGTGGGCAGGGCCTAGGCCTGGGCGGGAGGAACATTCCTGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AGCCCTGGGTGCCCAGCATCCGACCCAAGGGTGCAGCAGGCCTCGGTGTCTGCTTGGGGTACACTGCAGTaGCCAGGCCCAGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SPGCPASDPRVQQASVSAWGTLQ*PGPGEG
Trigger: TCCTTCCCCTGGGCCTGGTCACTGCAGTGTACCCCA...AGCAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATGCTGGGCACCCAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCGAGGACGCTATGCCCTaGACAGGGAGTCCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPEDAMP*TGSPAR
Trigger: GCGGGCAGGACTCCCTGTTCAGGGCATAGCGTCCTC...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp TCTCCCAGGAGGCAGGACAGGCCGCTTATCTCCCCCACCGCTGACCCCTCCCCCCCTGTAGCCCCCTCCTaGAGGGGACAGGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: SPRRQDRPLISPTADPSPPVAPS*RGQGDV
Trigger: TACATCACCCTGTCCCCTGCAGGAGGGGGCTACAGG...GGGGGAGGGGTCAGCGGTGGGGGAGATAAGCGGCCTGTCCTGCCTCCTGGGAGA
67% GC, longest homopolymer 7 nt, total homopolymer stretches 25 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp GGCTCTGCTCCAGCCAGTGGTGCAGCCACGGCACAGTGGTTCATAGCCCTCCTGCTGAACAGGGAGTCCTaGCCGCCCCTTCCCCCACCG +
Preference number: 4 (lower is better)
Translates to: GSAPASGAATAQWFIALLLNRES*PPLPPP
Trigger: CGGTGGGGGAAGGGGCGGGCAGGACTCCCTGTTCAG...CAGGAGGGCTATGAACCACTGTGCCGTGGCTGCACCACTGGCTGGAGCAGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp AGCCCTGGGTGCCCAGCATCCGACCCAAGGGTGCAGCAGGCCTCGGTGTCTGCTCTCACCGTCTTCTCCTaGCCCAGCCAGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SPGCPASDPRVQQASVSALTVFS*PSQWRG
Trigger: CCCTCTCCACTGGCTGGGGCAGGAGAAGACGGTGAG...AGCAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATGCTGGGCACCCAGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGCTCCGGCGAGCAGATaGCGCGGCCAGCCGTCTGTC +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPAPASR*RGQPSV
Trigger: GACAGACGGCTGGCCGCGCCATCTGCTCGCCGGAGC...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CCCAGAGTATCCCCTGCCCTGCTGGGTGATAAGGCCAGCCACCACTGCTCCCTGAGAGACAGCACAACCTaGCGGGGAGCAGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PRVSPALLGDKASHHCSLRDSTT*RGAGAH
Trigger: GTGGGCCCCTGCTCCCCGTCAGGTTGTGCTGTCTCT...CAGGGAGCAGTGGTGGCTGGCCTTATCACCCAGCAGGGCAGGGGATACTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp TCTCCCAGGAGGCAGGACAGGCCGCTTATCTCCCCCACCGCTGACCCCTCCCCCGAGAGCCTGCAGGGCTaGTGGAGTAGTCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: SPRRQDRPLISPTADPSPESLQG*WSSQHG
Trigger: ACCATGCTGACTACTCCAGCAGCCCTGCAGGCTCTC...GGGGGAGGGGTCAGCGGTGGGGGAGATAAGCGGCCTGTCCTGCCTCCTGGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCGATGCCAGGCTGTCCTaGCGCTCCAGTGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPDARLS*RSSGGL
Trigger: CAAGCCACCACTGGAGCGGCAGGACAGCCTGGCATC...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp TCTCCCAGGAGGCAGGACAGGCCGCTTATCTCCCCCACCGCTGACCCCTCCCCCTCTCCGCCCGGCGTTTaGCCATCTTCCACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SPRRQDRPLISPTADPSPSPPGV*PSSTAC
Trigger: ACAAGCAGTGGAAGATGGGCAAACGCCGGGCGGAGA...GGGGGAGGGGTCAGCGGTGGGGGAGATAAGCGGCCTGTCCTGCCTCCTGGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCGTCTGCCTCGTCCTaGACCATGCGGCCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRPSASS*TMRPSS
Trigger: TGACGAGGGCCGCATGGTGCAGGACGAGGCAGACGG...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp AGCCCTGGGTGCCCAGCATCCGACCCAAGGGTGCAGCAGGCCTCGGTGTCTGCTTGGTTCATCTCGGCCTaGAGGGCGAAACCCACCACG +
Preference number: 4 (lower is better)
Translates to: SPGCPASDPRVQQASVSAWFISA*RAKPTT
Trigger: CGTGGTGGGTTTCGCCCTGCAGGCCGAGATGAACCA...AGCAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATGCTGGGCACCCAGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCCCTCCCCCAGTCACTaGTGGTATAGGGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPPSPSH*WYREVG
Trigger: CCCGACCTCCCTATACCAGCAGTGACTGGGGGAGGG...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCGAGGGCAGGTGGGCATaGAATCCCTCGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPEGRWA*NPSHGW
Trigger: CCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTC...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCCAGAGCAGGGGCCGATaGGGCCACCTGCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PAESGTSAWHVTRQESAIQSRGR*GHLPLP
Trigger: TGGGAGAGGCAGGTGGCCCCATCGGCCCCTGCTCTG...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CAA 72 bp CTCCGGCTCCCGTGGCCACTGCAGCTCAGCTCTAGCTaGAGAAGGGAGCTGCCTGGAGCTCTGCTGGATCGG +
Preference number: 4 (lower is better)
Translates to: LRLPWPLQLSSS*RRELPGALLDR
Trigger: CCGATCCAGCAGAGCTCCAGGCAGCTCCCTTCTCAAGCTAGAGCTGAGCTGCAGTGGCCACGGGAGCCGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CAGGCACCATGGGTTAGGAGGAGCATTCCCACCAGCCCTGCCTCGGCCTGGCCCAAAGCAGCAGCCGCCTaGATCGAGTCCAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QAPWVRRSIPTSPASAWPKAAAA*IESKGG
Trigger: TCCACCCTTGGACTCGATTCAGGCGGCTGCTGCTTT...GGGCCAGGCCGAGGCAGGGCTGGTGGGAATGCTCCTCCTAACCCATGGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp TCTCCCAGGAGGCAGGACAGGCCGCTTATCTCCCCCACCGCTGACCCCTCCCCCAGCATGAGAAACGGTTaGGGTTACGGCCCACCACAC +
Preference number: 4 (lower is better)
Translates to: SPRRQDRPLISPTADPSPSMRNG*GYGPPH
Trigger: GTGTGGTGGGCCGTAACCTCAACCGTTTCTCATGCT...GGGGGAGGGGTCAGCGGTGGGGGAGATAAGCGGCCTGTCCTGCCTCCTGGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp TCTCCCAGGAGGCAGGACAGGCCGCTTATCTCCCCCACCGCTGACCCCTCCCCCCAGCATGGGTGGGTGTaGGCTTGTAGGAGATGTAGC +
Preference number: 4 (lower is better)
Translates to: SPRRQDRPLISPTADPSPQHGWV*ACRRCS
Trigger: GCTACATCTCCTACAAGCTCACACCCACCCATGCTG...GGGGGAGGGGTCAGCGGTGGGGGAGATAAGCGGCCTGTCCTGCCTCCTGGGAGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp AGCCCTGGGTGCCCAGCATCCGACCCAAGGGTGCAGCAGGCCTCGGTGTCTGCTTCCCAGGGGCACCCATaGCTCCTTGAAAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SPGCPASDPRVQQASVSASQGHP*LLESSF
Trigger: GAAGGAGCTTTCAAGGAGTCATGGGTGCCCCTGGGA...AGCAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATGCTGGGCACCCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCTGACCTTCACTGACTaGCCGGCAGCCCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRLTFTD*PAAQAL
Trigger: CAAGGCCTGGGCTGCCGGTCAGTCAGTGAAGGTCAG...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCTGGCCTGACCTTCACTaGCTGACCGGCAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCWPDLH*LTGSPG
Trigger: GCCTGGGCTGCCGGTCAGTCAGTGAAGGTCAGGCCA...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGGCTCTAGGGGAGGCTaGGACCCTGGCCTGACCTTC +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPGSRGG*DPGLTF
Trigger: GAAGGTCAGGCCAGGGTCTCAGCCTCCCCTAGAGCC...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp TCTCCCAGGAGGCAGGACAGGCCGCTTATCTCCCCCACCGCTGACCCCTCCCCCGCAGCAGTGGCCAGGTaGGCAAGCAAAATAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SPRRQDRPLISPTADPSPAAVAR*ASKIGS
Trigger: AGAGCCTATTTTGCTTGCTCACCTGGCCACTGCTGC...GGGGGAGGGGTCAGCGGTGGGGGAGATAAGCGGCCTGTCCTGCCTCCTGGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCCTGGGCCAAGACTGGTaGCCAGGGGATCCCCTACCC +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPLGQDW*PGDPLP
Trigger: GGGTAGGGGATCCCCTGGTCACCAGTCTTGGCCCAG...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCAGGTTGAGGGGAGGGTaGCCGTTGGTGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCRLRGG*PLVPSP
Trigger: TGGGCTGGGCACCAACGGGCACCCTCCCCTCAACCT...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp AGGGATGGATCCACCCAGGGGTCCACAGCCGCCTCTAGCTCCTCCTGCCTGCTGGAAAGTGGGGTACACTaGAGTGACCAGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RDGSTQGSTAASSSSCLLESGVH*SDQAQG
Trigger: CCCCTGGGCCTGGTCACTGCAGTGTACCCCACTTTC...CAGCAGGCAGGAGGAGCTAGAGGCGGCTGTGGACCCCTGGGTGGATCCATCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp ACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGGAAAGTGGGGTACACTaGAGTGACCAGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: TEGRWAWNPSHGWASRPLESGVH*SDQAQG
Trigger: CCCCTGGGCCTGGTCACTGCAGTGTACCCCACTTTC...CAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCTGGCCCAGCCCCCACTaGTCAGAGCCCCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PAESGTSAWHVTRQESAIWPSPH*SEPLLQ
Trigger: CTGCAGAAGGGGCTCTGAGCAGTGGGGGCTGGGCCA...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp AAGCTCCCTGGTCCCTGGTCTAGCCAACCTTCCCTGACGGCCTTGACCCTGGAAAAGGCCAGCCACCACTaGTCCCTGGGCCTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: KLPGPWSSQPSLTALTLEKASHH*SLGLRR
Trigger: GCGCCTGAGGCCCAGGGAGCAGTGGTGGCTGGCCTT...TTCCAGGGTCAAGGCCGTCAGGGAAGGTTGGCTAGACCAGGGACCAGGGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp TGGCTCCGGCTCCCGTGGCCACTGCAGCTCAGCTCTAGCTTGAGAAGGGAGCTGCCTACAGGAGGGAGATaGCCTGTAGCCCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WLRLPWPLQLSSSLRRELPTGGR*PVAPSC
Trigger: GCAGGAGGGGGCTACAGGCCATCTCCCTCCTGTAGG...CAGCTCCCTTCTCAAGCTAGAGCTGAGCTGCAGTGGCCACGGGAGCCGGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCGGCAAGGCCAGGGCATaGCTCCTTGGGGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCGKARA*LLGERS
Trigger: GCTCCTCTCCCCAAGGAGCCATGCCCTGGCCTTGCC...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp ACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGCACCCCCTCCAGGGGTaGTGTCTCCAAGCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: TEGRWAWNPSHGWASRPLHPLQG*CLQAKL
Trigger: GAGCTTTGCTTGGAGACACCACCCCTGGAGGGGGTG...CAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GGTGCAGGAATGTTCCTCCCGCCCAGGCCTAGGCCCTGCCCACCGCATCCTGGCTGTCATCCAGGCAGCTaGGGAAATGCTGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: GAGMFLPPRPRPCPPHPGCHPGS*GNAGSL
Trigger: AAGGCTTCCAGCATTTCCTCAGCTGCCTGGATGACA...GCCAGGATGCGGTGGGCAGGGCCTAGGCCTGGGCGGGAGGAACATTCCTGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCCTGATGGCCTCACCCTaGGGATGGAAGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PAESGTSAWHVTRQESAILMASP*GWKAWE
Trigger: CTCCCAGGCCTTCCATCCTCAGGGTGAGGCCATCAG...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GGTGCAGGAATGTTCCTCCCGCCCAGGCCTAGGCCCTGCCCACCGCATCCTGGCGTGTGGCTGTGGCTGTaGATGTGTAATAGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: GAGMFLPPRPRPCPPHPGVWLWL*MCNSVW
Trigger: CCACACGCTATTACACATTCACAGCCACAGCCACAC...GCCAGGATGCGGTGGGCAGGGCCTAGGCCTGGGCGGGAGGAACATTCCTGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGGCCACAGTGCTGAGCTaGAGGACGCTGTCGTCCATC +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRATVLS*RTLSSI
Trigger: GATGGACGACAGCGTCCTGCAGCTCAGCACTGTGGC...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCTCGTCCTGCACCATaGGGCCCTCGTCACTCATGC +
Preference number: 4 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCPRPAP*GPRHSC
Trigger: GCATGAGTGACGAGGGCCGCATGGTGCAGGACGAGG...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGTGGTTCATCTCGGCCTaGAGGGCGAAACCCACCACG +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRWFISA*RAKPTT
Trigger: CGTGGTGGGTTTCGCCCTGCAGGCCGAGATGAACCA...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCCATCCGACCCAAGGGTaGAGCAGGCCTCGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPHPTQG*SRPRCL
Trigger: CAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATG...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGCCTCTAGCTCCTCCTaGCTGCTGGCACCTTCCACC +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPASSSS*LLAPST
Trigger: GGTGGAAGGTGCCAGCAGGCAGGAGGAGCTAGAGGC...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGGCAGGATCTGAGGTCTaGTTCCATCCCCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRAGSEV*FHPQPP
Trigger: TGGGGGCTGGGGATGGAAGCAGACCTCAGATCCTGC...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CCCAGAGTATCCCCTGCCCTGCTGGGTGATAAGGCCAGCCACCACTGCTCCCTGGACCCTGGGAGGTCATaGAGGTGCAGTCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: PRVSPALLGDKASHHCSLDPGRS*RCSPGT
Trigger: TGTGCCTGGACTGCACCTGCATGACCTCCCAGGGTC...CAGGGAGCAGTGGTGGCTGGCCTTATCACCCAGCAGGGCAGGGGATACTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp ACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGCTGCAGCTGTCACCGTaGAGTGCCATCTTCAGACCC +
Preference number: 4 (lower is better)
Translates to: TEGRWAWNPSHGWASRPLLQLSP*SAIFRP
Trigger: GGGTCTGAAGATGGCACTGCACGGTGACAGCTGCAG...CAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGCCCACCACTCCTAGCTaGGCTGGCCACACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LESEEGRMLQWSPARDKLPTTPS*AGHTGA
Trigger: AGCCCCAGTGTGGCCAGCCCAGCTAGGAGTGGTGGG...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGCTGCCGCTCCAGTGGTaGCTTGGGCCGGAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LESEEGRMLQWSPARDKLLPLQW*LGPEGH
Trigger: ATGGCCTTCCGGCCCAAGCCACCACTGGAGCGGCAG...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCGGAAGGCCTGGGAGGTaGTCCCCTCTCAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PAESGTSAWHVTRQESAIGRPGR*SPLKEG
Trigger: GCCTTCCTTGAGAGGGGACCACCTCCCAGGCCTTCC...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGGGATGCCCCCAACACTaGTCCCCCAATCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRGCPQH*SPNLLL
Trigger: CAGCAGGAGATTGGGGGACCAGTGTTGGGGGCATCC...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp ACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGGCAGCCACGGCACAGTaGTTCATAGCCCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: TEGRWAWNPSHGWASRPLAATAQ*FIALLC
Trigger: ACACAGGAGGGCTATGAACCACTGTGCCGTGGCTGC...CAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CAGGCACCATGGGTTAGGAGGAGCATTCCCACCAGCCCTGCCTCGGCCTGGCCCTGTGGTGCTTGTGACTaGCTCTACTCCCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QAPWVRRSIPTSPASAWPCGACD*LYSPLE
Trigger: CTCCAAGGGGGAGTAGAGCCAGTCACAAGCACCACA...GGGCCAGGCCGAGGCAGGGCTGGTGGGAATGCTCCTCCTAACCCATGGTGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGGAAGCAGGTTAGGGTaGGTGGGGGAGCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPGSRLG*VGELSR
Trigger: CCTGCTCAGCTCCCCCACCCACCCTAACCTGCTTCC...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGTTCATCCCTCAGGGCTaGGGGGACTCACCCTACCCT +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRFIPQG*GDSPYP
Trigger: AGGGTAGGGTGAGTCCCCCCAGCCCTGAGGGATGAA...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGGCTTCCGCTTTTCGATaGAGTCCTCCTCGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRASAFR*SPPRSG
Trigger: GCCGCTTCGAGGAGGACTTCATCGAAAAGCGGAAGC...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp AGGGATGGATCCACCCAGGGGTCCACAGCCGCCTCTAGCTCCTCCTGCCTGCTGGGTCCATCCAGAGGATaGGTCTCCGCTTCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: RDGSTQGSTAASSSSCLLGPSRG*VSASAF
Trigger: AAAAGCGGAAGCGGAGACTCATCCTCTGGATGGACC...CAGCAGGCAGGAGGAGCTAGAGGCGGCTGTGGACCCCTGGGTGGATCCATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGCAGCTGAGACCCTGGCCTaGCCTTCACTGACTGACCGG +
Preference number: 4 (lower is better)
Translates to: PSLRTPEEQACHSPGCPAAETLA*PSLTDR
Trigger: CCGGTCAGTCAGTGAAGGTCAGGCCAGGGTCTCAGC...TGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCCTGCCCGAGATAAGCTaGGGGCCCAAAAGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPLPEIS*GPKSGG
Trigger: CCCTCCACTTTTGGGCCCTCAGCTTATCTCGGGCAG...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGCAGGAAGGAGAGGGTCCTaGCCAGACCGGGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: PSLRTPEEQACHSPGCPAGRRGS*PDRGCS
Trigger: TGAGCATCCCCGGTCTGGGCAGGACCCTCTCCTTCC...TGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp TGGCTCCGGCTCCCGTGGCCACTGCAGCTCAGCTCTAGCTTGAGAAGGGAGCTGCGATCTTCCACGTCCTaGAAGTCCTGGTGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: WLRLPWPLQLSSSLRRELRSSTS*KSWCSV
Trigger: CACCGAGCACCAGGACTTGCAGGACGTGGAAGATCG...CAGCTCCCTTCTCAAGCTAGAGCTGAGCTGCAGTGGCCACGGGAGCCGGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCCCTGCGAATGCCGTCTaGCTCGTCCTGCACCATGCG +
Preference number: 4 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPPANAV*LVLHHA
Trigger: CGCATGGTGCAGGACGAGGCAGACGGCATTCGCAGG...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGCCTGCGAATGCCGTCTaGCTCGTCCTGCACCATGCG +
Preference number: 4 (lower is better)
Translates to: LESEEGRMLQWSPARDKLPANAV*LVLHHA
Trigger: CGCATGGTGCAGGACGAGGCAGACGGCATTCGCAGG...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCCATCCGACCCAAGGGTaGAGCAGGCCTCGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPHPTQG*SRPRCL
Trigger: CAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATG...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCTGTAGCCCCCTCCTaGAGGGGACAGGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCPVAPS*RGQGDV
Trigger: TACATCACCCTGTCCCCTGCAGGAGGGGGCTACAGG...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCAGGAGGGGAGGATGCTaGAATGGTCCCCTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPRRGGC*NGPLPE
Trigger: CTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCT...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp AGGGATGGATCCACCCAGGGGTCCACAGCCGCCTCTAGCTCCTCCTGCCTGCTGGCTCTATCCTTCTCCTaGCCTCCGCCTTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RDGSTQGSTAASSSSCLLALSFS*PPPFWD
Trigger: ATCCCAGAAAGGCGGAGGGCAGGAGAAGGATAGAGC...CAGCAGGCAGGAGGAGCTAGAGGCGGCTGTGGACCCCTGGGTGGATCCATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp AGCCCTGGGTGCCCAGCATCCGACCCAAGGGTGCAGCAGGCCTCGGTGTCTGCTAGACCTCAGGCTGTGTaGCTGTATGTGGTGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SPGCPASDPRVQQASVSARPQAV*LYVVLV
Trigger: CACAAGCACCACATACAGGCACACAGCCTGAGGTCT...AGCAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATGCTGGGCACCCAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CAGGCACCATGGGTTAGGAGGAGCATTCCCACCAGCCCTGCCTCGGCCTGGCCCGCGAAAGGGAATAAATaGTGCCTACTGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QAPWVRRSIPTSPASAWPAKGNK*CLLGLL
Trigger: CAGCAGCCCCAGTAGGCAGCATTTATTCCCTTTCGC...GGGCCAGGCCGAGGCAGGGCTGGTGGGAATGCTCCTCCTAACCCATGGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGGCTCGGCTGTCCCTCTaGCTCCCAGATTCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRARLSL*LPDSFG
Trigger: GCCAAAAGAATCTGGGAGCCAGAGGGACAGCCGAGC...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GGGCTTATACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCTCCCCACGGCTGTTCTaGCCCTGCAGCCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: GLIPQHLESEEGRMLQWSSPRLF*PCSQPS
Trigger: GGATGGCTGGCTGCAGGGCCAGAACAGCCGTGGGGA...GGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCCAGAGTATCCCCTGCCCTGCTGGGTGATAAGGCCAGCCACCACTGCTCCCTGTGCTCGGTGGGGATCTaGAAGGTGAGCAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PRVSPALLGDKASHHCSLCSVGI*KVSRKL
Trigger: CAGCTTCCTGCTCACCTTCCAGATCCCCACCGAGCA...CAGGGAGCAGTGGTGGCTGGCCTTATCACCCAGCAGGGCAGGGGATACTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp TGGCTCCGGCTCCCGTGGCCACTGCAGCTCAGCTCTAGCTTGAGAAGGGAGCTGGCACTGCCCAGCTTCTaGAATTCCTTGCGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: WLRLPWPLQLSSSLRRELALPSF*NSLRKP
Trigger: GGGCTTCCGCAAGGAATTCCAGAAGCTGGGCAGTGC...CAGCTCCCTTCTCAAGCTAGAGCTGAGCTGCAGTGGCCACGGGAGCCGGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCAAACATCTCCCCGATaGCTTCATAGGTACGGCCCG +
Preference number: 4 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPQTSPR*LHRYGP
Trigger: CGGGCCGTACCTATGAAGCCATCGGGGAGATGTTTG...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp TCTCCCAGGAGGCAGGACAGGCCGCTTATCTCCCCCACCGCTGACCCCTCCCCCAGTGTGTCCAGCATCTaGAAGAGGTCATTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SPRRQDRPLISPTADPSPSVSSI*KRSFLG
Trigger: GCCCAAGAATGACCTCTTCCAGATGCTGGACACACT...GGGGGAGGGGTCAGCGGTGGGGGAGATAAGCGGCCTGTCCTGCCTCCTGGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCAATCCCTCGCATGGCTaGGCAAGCAGGCCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCNPSHG*ASRPLS
Trigger: AGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATT...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CCCAGAGTATCCCCTGCCCTGCTGGGTGATAAGGCCAGCCACCACTGCTCCCTGCAGACAGAGGGCAGGTaGGCATGGAATCCCTCGCAT +
Preference number: 4 (lower is better)
Translates to: PRVSPALLGDKASHHCSLQTEGR*AWNPSH
Trigger: ATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG...CAGGGAGCAGTGGTGGCTGGCCTTATCACCCAGCAGGGCAGGGGATACTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCCAGGGCATGGCTCCTTaGGGAGAGGAGCCACCATCT +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPQGMAP*GEEPPS
Trigger: AGATGGTGGCTCCTCTCCCCAAGGAGCCATGCCCTG...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCCAGAGTATCCCCTGCCCTGCTGGGTGATAAGGCCAGCCACCACTGCTCCCTGAAGCTCCCTGGTCCCTaGTCTAGCCAACCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PRVSPALLGDKASHHCSLKLPGP*SSQPSL
Trigger: CAGGGAAGGTTGGCTAGACCAGGGACCAGGGAGCTT...CAGGGAGCAGTGGTGGCTGGCCTTATCACCCAGCAGGGCAGGGGATACTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGCACCCCACCGCACCTGCTaGCCCTTCTCCATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PSLRTPEEQACHSPGCPAPHRTC*PFSIFL
Trigger: CAGGAAGATGGAGAAGGGCCAGCAGGTGCGGTGGGG...TGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCTATGGCTCTGTCATCTaGGAGGGGTGGTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPYGSVI*EGWCRA
Trigger: TGCTCTGCACCACCCCTCCCAGATGACAGAGCCATA...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CAA 72 bp CAGGGATCTGGGGCCCAGGGCTTATACCTCAGCACCTaGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: QGSGAQGLYLST*SPRRGGCCNGP
Trigger: GGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCCTGGGCCCCAGATCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp TGGCTCCGGCTCCCGTGGCCACTGCAGCTCAGCTCTAGCTTGAGAAGGGAGCTGCGGGAAAACAAGGACTaGGGCTTACACAACAGGCCG +
Preference number: 4 (lower is better)
Translates to: WLRLPWPLQLSSSLRRELRENKD*GLHNRP
Trigger: CGGCCTGTTGTGTAAGCCTCAGTCCTTGTTTTCCCG...CAGCTCCCTTCTCAAGCTAGAGCTGAGCTGCAGTGGCCACGGGAGCCGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GGCTCTGCTCCAGCCAGTGGTGCAGCCACGGCACAGTGGTTCATAGCCCTCCTGTCTGGAAGGAATGACTaGTGGCCTGGAAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: GSAPASGAATAQWFIALLSGRND*WPGRHC
Trigger: GCAGTGCCTTCCAGGCCATCAGTCATTCCTTCCAGA...CAGGAGGGCTATGAACCACTGTGCCGTGGCTGCACCACTGGCTGGAGCAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp TCTCCCAGGAGGCAGGACAGGCCGCTTATCTCCCCCACCGCTGACCCCTCCCCCTCAGTCATACTGCATTaGCTCTGTCTGTGTCTGACC +
Preference number: 4 (lower is better)
Translates to: SPRRQDRPLISPTADPSPSVILH*LCLCLT
Trigger: GGTCAGACACAGACAGAGTCAATGCAGTATGACTGA...GGGGGAGGGGTCAGCGGTGGGGGAGATAAGCGGCCTGTCCTGCCTCCTGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGAAGGTCCGCTCATCCTaGTCAGGGCACCCCCAACAG +
Preference number: 4 (lower is better)
Translates to: LESEEGRMLQWSPARDKLKVRSS*SGHPQQ
Trigger: CTGTTGGGGGTGCCCTGATCAGGATGAGCGGACCTT...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGCCAGAGCAGGAAGCATaGGCAGGGGACTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LESEEGRMLQWSPARDKLPEQEA*AGDFPG
Trigger: GCCTGGAAAGTCCCCTGCTCATGCTTCCTGCTCTGG...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCTGTGACTCTAAGGAGTaGTGGCAGGGAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPCDSKE*WQGAGF
Trigger: AAACCCAGCTCCCTGCCATCACTCCTTAGAGTCACA...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGCTCCTCCACCACTGTaGATCCGTCGTCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPAPPPL*IRRPSH
Trigger: ATGACTGGGACGACGGATGCACAGTGGTGGAGGAGC...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCTTGCCCATCTTCCACTaGTTGTCATCCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPLPIFH*LSSRQL
Trigger: CAGCTGCCTGGATGACAAGCAGTGGAAGATGGGCAA...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp GGGCTTATACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTCGTCCTGCACCATaGGGCCCTCGTCACTCATGC +
Preference number: 4 (lower is better)
Translates to: GLIPQHLESEEGRMLQWSPRPAP*GPRHSC
Trigger: GCATGAGTGACGAGGGCCGCATGGTGCAGGACGAGG...GGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGACCACGCGGCAGCGCCTaGGAATGCCGTCTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRPRGSA*ECRLPR
Trigger: ACGAGGCAGACGGCATTCGCAGGCGCTGCCGCGTGG...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp TGGCTCCGGCTCCCGTGGCCACTGCAGCTCAGCTCTAGCTTGAGAAGGGAGCTGCCACCAAGTCCCCATTaGCTCCAAAGGAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: WLRLPWPLQLSSSLRRELPPSPH*LQRRAK
Trigger: CTTGGCTCTCCTTTGGAGGCAATGGGGACTTGGTGG...CAGCTCCCTTCTCAAGCTAGAGCTGAGCTGCAGTGGCCACGGGAGCCGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCCGAGTCGGGAACATCTaGCTGGCATGTGACGAGGCA +
Preference number: 4 (lower is better)
Translates to: PAESGTSAWHVTRQESAIRVGNI*LACDEA
Trigger: TGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCG...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp GTAGCTGTCCAGGGCAGAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGGCCGATGGGGCCACCTaGCTCTCCCAGGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VAVQGRKRSLVFHPLRAKADGAT*LSQAWL
Trigger: GAGCCAGGCCTGGGAGAGGCAGGTGGCCCCATCGGC...CTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTCTGCCCTGGACAGCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCCCAGGAAACAGAGTCTaGCCAGAGCCAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPPGNRV*PEPGSG
Trigger: GCCAGAGCCTGGCTCTGGGCAGACTCTGTTTCCTGG...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCCAAATGGGTGGGGATTaGCCTTCCACTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPQMGGD*PSTGGH
Trigger: GTGGCCCCCAGTGGAAGGCCAATCCCCACCCATTTG...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCTGCTTCTCAGGCAGGTaGGGCACCGAGATGACAGTG +
Preference number: 4 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCCFSGR*GTEMTV
Trigger: CACTGTCATCTCGGTGCCCCACCTGCCTGAGAAGCA...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGAGAGCACAGGGTGGCTaGTCATGTGGTCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRRAQGG*SCGPSR
Trigger: TCTGGATGGACCACATGACCAGCCACCCTGTGCTCT...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp TCTCCCAGGAGGCAGGACAGGCCGCTTATCTCCCCCACCGCTGACCCCTCCCCCGGAAGAGGTCATTCTTaGGCTGCTCAGCAAACATCT +
Preference number: 4 (lower is better)
Translates to: SPRRQDRPLISPTADPSPGRGHS*AAQQTS
Trigger: AGATGTTTGCTGAGCAGCCCAAGAATGACCTCTTCC...GGGGGAGGGGTCAGCGGTGGGGGAGATAAGCGGCCTGTCCTGCCTCCTGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AAGCTCCCTGGTCCCTGGTCTAGCCAACCTTCCCTGACGGCCTTGACCCTGGAAAGCTCACGGCGCTGGTaGAAGTGGTTCATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: KLPGPWSSQPSLTALTLESSRRW*KWFISA
Trigger: GGCCGAGATGAACCACTTCCACCAGCGCCGTGAGCT...TTCCAGGGTCAAGGCCGTCAGGGAAGGTTGGCTAGACCAGGGACCAGGGAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCCAGAGTATCCCCTGCCCTGCTGGGTGATAAGGCCAGCCACCACTGCTCCCTGGGACAGCCAGCAACATaGGAGCAAGGGAGATCCCTT +
Preference number: 4 (lower is better)
Translates to: PRVSPALLGDKASHHCSLGQPAT*EQGRSL
Trigger: AAGGGATCTCCCTTGCTCCCATGTTGCTGGCTGTCC...CAGGGAGCAGTGGTGGCTGGCCTTATCACCCAGCAGGGCAGGGGATACTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCTGAGGGCCCAAAAGTaGAGGGGAGTCAGAGGCCTA +
Preference number: 4 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCLRAQK*RGVRGL
Trigger: TAGGCCTCTGACTCCCCTCCACTTTTGGGCCCTCAG...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCTGAGATCCTGGGTTTaGACCTGCTTCGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRLRSWV*TCFECG
Trigger: CCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp AGCCCTGGGTGCCCAGCATCCGACCCAAGGGTGCAGCAGGCCTCGGTGTCTGCTCAACAGGAAGGATCTTaGGAAGACAGTGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SPGCPASDPRVQQASVSAQQEGS*EDSATE
Trigger: CTCTGTGGCACTGTCTTCCCAAGATCCTTCCTGTTG...AGCAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATGCTGGGCACCCAGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGATGGAATCCCTCGCATaGCTGGGCAAGCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LESEEGRMLQWSPARDKLMESLA*LGKQAP
Trigger: AGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCCAT...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCCAGACAGAGGGCAGGTaGGCATGGAATCCCTCGCAT +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPQTEGR*AWNPSH
Trigger: ATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGCACGTTCTAGGGAGGGATaGATCCACCCAGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: PSLRTPEEQACHSPGCPARSREG*IHPGVH
Trigger: GTGGACCCCTGGGTGGATCCATCCCTCCCTAGAACG...TGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AGCCCTGGGTGCCCAGCATCCGACCCAAGGGTGCAGCAGGCCTCGGTGTCTGCTTTCCTTTTCCTGTACTaGGCCAAGACTGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: SPGCPASDPRVQQASVSAFLFLY*AKTGDQ
Trigger: CTGGTCACCAGTCTTGGCCCAGTACAGGAAAAGGAA...AGCAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATGCTGGGCACCCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGTATCCCCTGCCCTGCTaGGTGATAAGGCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: LESEEGRMLQWSPARDKLYPLPC*VIRPAT
Trigger: GGTGGCTGGCCTTATCACCCAGCAGGGCAGGGGATA...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AAGCTCCCTGGTCCCTGGTCTAGCCAACCTTCCCTGACGGCCTTGACCCTGGAATTGGAGTTTGGAGAGTaGGCTCCGGCGAGCAGATGG +
Preference number: 4 (lower is better)
Translates to: KLPGPWSSQPSLTALTLELEFGE*APASRW
Trigger: CCATCTGCTCGCCGGAGCTCACTCTCCAAACTCCAA...TTCCAGGGTCAAGGCCGTCAGGGAAGGTTGGCTAGACCAGGGACCAGGGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGTGTCATCCAGGCAGCTaGGGAAATGCTGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRCHPGS*GNAGSL
Trigger: AAGGCTTCCAGCATTTCCTCAGCTGCCTGGATGACA...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCTTTACGCACCAGCTCTaGTGCCACAGTGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PAESGTSAWHVTRQESAIFTHQL*CHSAEL
Trigger: CAGCTCAGCACTGTGGCATCAGAGCTGGTGCGTAAA...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GGCTCTGCTCCAGCCAGTGGTGCAGCCACGGCACAGTGGTTCATAGCCCTCCTGGAGAAATGGCACTGTTaGGGGCCTCAGAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: GSAPASGAATAQWFIALLEKWHC*GPQSKR
Trigger: CCTTTTGCTCTGAGGCCCTCAACAGTGCCATTTCTC...CAGGAGGGCTATGAACCACTGTGCCGTGGCTGCACCACTGGCTGGAGCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGAGAGACAGCACAACCTaGCGGGGAGCAGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVRDSTT*RGAGAH
Trigger: GTGGGCCCCTGCTCCCCGTCAGGTTGTGCTGTCTCT...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp AGCCCTGGGTGCCCAGCATCCGACCCAAGGGTGCAGCAGGCCTCGGTGTCTGCTGCACAGAGATGCTTATaGCACCTTTGCTCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: SPGCPASDPRVQQASVSAAQRCL*HLCSVQ
Trigger: TTGCACAGAGCAAAGGTGTCATAAGCATCTCTGTGC...AGCAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATGCTGGGCACCCAGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGAGGCTCGGCCTTTCAGTaGCATGGCTGGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRGSAFQ*HGWAGW
Trigger: CCACCCAGCCCAGCCATGGCACTGAAAGGCCGAGCC...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTGGCTCCGGGAGAGCCTaGAGGGCTGCTGGAGTAGTC +
Preference number: 4 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFGSGRA*RAAGVV
Trigger: GACTACTCCAGCAGCCCTGCAGGCTCTCCCGGAGCC...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CCCAGAGTATCCCCTGCCCTGCTGGGTGATAAGGCCAGCCACCACTGCTCCCTGTTGCCCATCTTCCACTaGTTGTCATCCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PRVSPALLGDKASHHCSLLPIFH*LSSRQL
Trigger: CAGCTGCCTGGATGACAAGCAGTGGAAGATGGGCAA...CAGGGAGCAGTGGTGGCTGGCCTTATCACCCAGCAGGGCAGGGGATACTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGCCTCTGAGGACGCTATaGCCTGAACAGGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LESEEGRMLQWSPARDKLPLRTL*PEQGVL
Trigger: CAGGACTCCCTGTTCAGGGCATAGCGTCCTCAGAGG...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGGAGGCTATGACCATGTaGATAGGACTGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASREAMTM*IGLWCG
Trigger: GCCACACCACAGTCCTATGCACATGGTCATAGCCTC...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCTGGCGGCTCTCGCTTTaGGAGGCTCTCACATTCCTC +
Preference number: 4 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPWRLSL*EALTFL
Trigger: GAGGAATGTGAGAGCCTCCCAAAGCGAGAGCCGCCA...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGGGTGGTATAGAAAGATaGGAAGGAGAGGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRGGIER*EGEGPA
Trigger: GGCAGGACCCTCTCCTTCCCATCTTTCTATACCACC...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCTTTCAGTGCCATGGCTaGGCTGGGTGGTATAGAAAG +
Preference number: 4 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPFQCHG*AGWYRK
Trigger: CTTTCTATACCACCCAGCCCAGCCATGGCACTGAAA...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp ACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGATTTGGTCTGTTTTGTaGGGTCCTCCACAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TEGRWAWNPSHGWASRPLIWSVL*GPPQSR
Trigger: CCTGCTCTGTGGAGGACCCCACAAAACAGACCAAAT...CAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGCATGCTTCTCAGGCAGGTaGGGCACCGAGATGACAGTG +
Preference number: 4 (lower is better)
Translates to: PSLRTPEEQACHSPGCPACFSGR*GTEMTV
Trigger: CACTGTCATCTCGGTGCCCCACCTGCCTGAGAAGCA...TGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCAGAGCACAGGGTGGCTaGTCATGTGGTCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCRAQGG*SCGPSR
Trigger: TCTGGATGGACCACATGACCAGCCACCCTGTGCTCT...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCAGCTGAGGAAATGCTaGAAGCCTTCGTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRQLRKC*KPSYWE
Trigger: CTCCCAGTACGAAGGCTTCCAGCATTTCCTCAGCTG...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCTCGAGCTCACGGCGCTaGTGGAAGTGGTTCATCTCG +
Preference number: 4 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPSSSRR*WKWFIS
Trigger: CGAGATGAACCACTTCCACCAGCGCCGTGAGCTCGA...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp TGGCTCCGGCTCCCGTGGCCACTGCAGCTCAGCTCTAGCTTGAGAAGGGAGCTGGTCTTCCCTGACCAGTaGAATGCTGTGGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: WLRLPWPLQLSSSLRRELVFPDQ*NAVVPS
Trigger: AGAAGGGACCACAGCATTCCACTGGTCAGGGAAGAC...CAGCTCCCTTCTCAAGCTAGAGCTGAGCTGCAGTGGCCACGGGAGCCGGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GGGCTTATACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCAATCCCTCGCATGGCTaGGCAAGCAGGCCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: GLIPQHLESEEGRMLQWSNPSHG*ASRPLS
Trigger: AGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATT...GGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp AAGCTCCCTGGTCCCTGGTCTAGCCAACCTTCCCTGACGGCCTTGACCCTGGAACTTCAGTTTCCAATGTaGGAGCCTCCGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KLPGPWSSQPSLTALTLELQFPM*EPPQGW
Trigger: CCAGCCCTGCGGAGGCTCCCACATTGGAAACTGAAG...TTCCAGGGTCAAGGCCGTCAGGGAAGGTTGGCTAGACCAGGGACCAGGGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGGGGAAGTTCCTCGGATaGGTTAGAAAATGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRGKFLG*VRKWGR
Trigger: CCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCC...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGCACCCAGCCCCCATCTGTaGCCACAAAGCGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: PSLRTPEEQACHSPGCPAPSPHL*PQSGFL
Trigger: AAGGAATCCGCTTTGTGGCCACAGATGGGGGCTGGG...TGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACGCCACCACTGCTCCCTaGGCCTCAGGCGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: LRSWVWTCFECGELLLVNATTAP*ASGAHL
Trigger: CAGATGGGCGCCTGAGGCCCAGGGAGCAGTGGTGGC...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCTGCTTGGGGAGGAGATaGTGCAGGAATGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPCLGRR*CRNVPP
Trigger: GGGAGGAACATTCCTGCACCATCTCCTCCCCAAGCA...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGGGGTCCTCACATGCTTaGGGAGGAGATGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LESEEGRMLQWSPARDKLGSSHA*GGDGAG
Trigger: TCCTGCACCATCTCCTCCCCAAGCATGTGAGGACCC...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGCATCTGCATCATGTGCTTaGAGTCGAGCTCACGGCGCT +
Preference number: 4 (lower is better)
Translates to: PSLRTPEEQACHSPGCPASASCA*SRAHGA
Trigger: AGCGCCGTGAGCTCGACTTCAAGCACATGATGCAGA...TGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGATGGGGTACACTGCAGTaGCCAGGCCCAGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRWGTLQ*PGPGEG
Trigger: TCCTTCCCCTGGGCCTGGTCACTGCAGTGTACCCCA...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCTGACCTTCACTGACTaGCCGGCAGCCCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVLTFTD*PAAQAL
Trigger: CAAGGCCTGGGCTGCCGGTCAGTCAGTGAAGGTCAG...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCTTCACTGAGGACTCCTaGAGAGCAGGCATGTCACAG +
Preference number: 4 (lower is better)
Translates to: PAESGTSAWHVTRQESAIFTEDS*RAGMSQ
Trigger: CTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAA...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGCATATACCTCAGCACCTTaGGTCCGAGGAGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PSLRTPEEQACHSPGCPAYTSAP*VRGGED
Trigger: ATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATA...TGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCTCTCATCTGTGGATaGACAGATCCAAGAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRPLICG*TDPRAR
Trigger: CCTTGCTCTTGGATCTGTTCATCCACAGATGAGAGG...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GGGCTTATACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGTGTCCAGCGGGTaGAGAGATGCAGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: GLIPQHLESEEGRMLQWSPVSSG*RDAGSE
Trigger: CTCAGATCCTGCATCTCTTCACCCGCTGGACACAGG...GGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AGGGATGGATCCACCCAGGGGTCCACAGCCGCCTCTAGCTCCTCCTGCCTGCTGGAGCGATTACATTCGTaGGTCTGTGAGTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: RDGSTQGSTAASSSSCLLERLHS*VCECVD
Trigger: GTCTACACACTCACAGACTCACGAATGTAATCGCTC...CAGCAGGCAGGAGGAGCTAGAGGCGGCTGTGGACCCCTGGGTGGATCCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCAGGCAGCTGAGGAAATaGTGGAAGCCTTCGTACTGG +
Preference number: 4 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCRQLRK*WKPSYW
Trigger: CCAGTACGAAGGCTTCCAGCATTTCCTCAGCTGCCT...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp GGGCTTATACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCGATCTTCCACGTCCTaGAAGTCCTGGTGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: GLIPQHLESEEGRMLQWSRSSTS*KSWCSV
Trigger: CACCGAGCACCAGGACTTGCAGGACGTGGAAGATCG...GGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGTTCTCACCCCTGCTGTaGCCCACTTCTAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LESEEGRMLQWSPARDKLFSPLL*PTSKEW
Trigger: CCACTCCTTAGAAGTGGGGCACAGCAGGGGTGAGAA...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGATCTTGGGAAGACAGTaGCACAGAGCCCAAGGACCC +
Preference number: 4 (lower is better)
Translates to: LESEEGRMLQWSPARDKLILGRQ*HRAQGP
Trigger: GGGTCCTTGGGCTCTGTGGCACTGTCTTCCCAAGAT...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCCAACAGTTTGGAGTTTaGAGAGTGAGCTCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPQQFGV*RVSSGE
Trigger: CTCGCCGGAGCTCACTCTCCAAACTCCAAACTGTTG...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AGGGATGGATCCACCCAGGGGTCCACAGCCGCCTCTAGCTCCTCCTGCCTGCTGAAAAGTCAAGTGACCTaGAGAAATCTGCCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: RDGSTQGSTAASSSSCLLKSQVT*RNLPCE
Trigger: CTCGCAGGGCAGATTTCTCCAGGTCACTTGACTTTT...CAGCAGGCAGGAGGAGCTAGAGGCGGCTGTGGACCCCTGGGTGGATCCATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCTCTCAGGTCCTAAGGTaGGGTCTCAGCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPSQVLR*GLSTHR
Trigger: TCTGTGGGTGCTGAGACCCCACCTTAGGACCTGAGA...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCGGCGCTGGTGGAAGTaGTTCATCTCGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFRRWWK*FISACR
Trigger: CCTGCAGGCCGAGATGAACCACTTCCACCAGCGCCG...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGCAGGACAGCCAGCAACATaGGAGCAAGGGAGATCCCTT +
Preference number: 4 (lower is better)
Translates to: PSLRTPEEQACHSPGCPAGQPAT*EQGRSL
Trigger: AAGGGATCTCCCTTGCTCCCATGTTGCTGGCTGTCC...TGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp TGGCTCCGGCTCCCGTGGCCACTGCAGCTCAGCTCTAGCTTGAGAAGGGAGCTGGGTGCTTTGAATGGATaGCAAGGCATGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: WLRLPWPLQLSSSLRRELGALNG*QGMCGC
Trigger: ACAGCCACACATGCCTTGCCATCCATTCAAAGCACC...CAGCTCCCTTCTCAAGCTAGAGCTGAGCTGCAGTGGCCACGGGAGCCGGAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACGGCTCTACTCCCCCTTaGAGACACCCCCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LRSWVWTCFECGELLLVNGSTPP*RHPLQG
Trigger: CCCCTGGAGGGGGTGTCTCCAAGGGGGAGTAGAGCC...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTCCTGGCCCAGAGGATTaGCCCAGGGGAGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SPSPPCTVWQALVILQNTPGPED*PRGGQG
Trigger: GCCCTGCCCTCCCCTGGGCCAATCCTCTGGGCCAGG...AGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTAAGGGAGGAAACGAGCTGCCCACCGCATCCTaGCTCCGGCTCCCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: EREALFSTPSEQSKGGNELPTAS*LRLPWP
Trigger: TGGCCACGGGAGCCGGAGCCAGGATGCGGTGGGCAG...CTCGTTTCCTCCCTTACTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GGCTCTGCTCCAGCCAGTGGTGCAGCCACGGCACAGTGGTTCATAGCCCTCCTGGTCCCATCTTCCCTCTaGCCAAGTCTCAGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GSAPASGAATAQWFIALLVPSSL*PSLSLF
Trigger: AAAGAGACTGAGACTTGGCCAGAGGGAAGATGGGAC...CAGGAGGGCTATGAACCACTGTGCCGTGGCTGCACCACTGGCTGGAGCAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGGAATGCACTCGCAGCTaGATGGCGCTTACACAGTTC +
Preference number: 4 (lower is better)
Translates to: LESEEGRMLQWSPARDKLECTRS*MALTQF
Trigger: GAACTGTGTAAGCGCCATTCAGCTGCGAGTGCATTC...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CTCCAAAGGAGAGCCAAGTCTCAACCAGTACCCTCCTCTCATCTGTGGATGAACCAGGGTAGGAGAGGTTaGGGGGAGGGTGCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LQRRAKSQPVPSSHLWMNQGRRG*GEGARW
Trigger: CCAACGGGCACCCTCCCCTCAACCTCTCCTACCCTG...GTTCATCCACAGATGAGAGGAGGGTACTGGTTGAGACTTGGCTCTCCTTTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGACTGATGCCACAGTGCTaGGCTGCAGGACGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRLMPQC*AAGRCR
Trigger: ACGACAGCGTCCTGCAGCTCAGCACTGTGGCATCAG...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGTTCACTGAGGACTCCTaGAGAGCAGGCATGTCACAG +
Preference number: 4 (lower is better)
Translates to: LESEEGRMLQWSPARDKLFTEDS*RAGMSQ
Trigger: CTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAA...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGATACGGCCCACCACACTaGCTCGCTTGGCAGATGCCA +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRYGPPH*LAWQMP
Trigger: TGGCATCTGCCAAGCGAGGCAGTGTGGTGGGCCGTA...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGCCGTCTGCCTCGTCCTaGACCATGCGGCCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKPSASS*TMRPSS
Trigger: TGACGAGGGCCGCATGGTGCAGGACGAGGCAGACGG...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp ACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTGTGGAAAATTTGTaGCCACCACGACCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: TEGRWAWNPSHGWASRPLSVENL*PPRPQN
Trigger: ATTCTGAGGTCGTGGTGGGCACAAATTTTCCACAGA...CAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGCGGCCATCACCAGGATaGCCCCAACACTGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKRPSPG*PQHWSP
Trigger: GGGGGACCAGTGTTGGGGGCATCCTGGTGATGGCCG...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGTGCTCCAGCCAGTGGTaGAGCCACGGCACAGTGGTT +
Preference number: 4 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVCSSQW*SHGTVV
Trigger: AACCACTGTGCCGTGGCTGCACCACTGGCTGGAGCA...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CTCCAAAGGAGAGCCAAGTCTCAACCAGTACCCTCCTCTCATCTGTGGATGAACTCCCAGGCCTGGCTCTaGTCCAGCCAGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LQRRAKSQPVPSSHLWMNSQAWL*SSQWCS
Trigger: GCTGCACCACTGGCTGGAGCAGAGCCAGGCCTGGGA...GTTCATCCACAGATGAGAGGAGGGTACTGGTTGAGACTTGGCTCTCCTTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTGGCTGGGTCCTCACATaGTTGGGGAGGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFGWVLT*LGRRWC
Trigger: GCACCATCTCCTCCCCAAGCATGTGAGGACCCAGCC...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTGGGGTCCTGCCGCTCCAGTaGTGGCTTGGGCCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: APVFFLLGFPLCNRKDLGVLPLQ*WLGPEG
Trigger: GCCTTCCGGCCCAAGCCACCACTGGAGCGGCAGGAC...CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGCACAGCTGAGGAAATGCTaGAAGCCTTCGTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: PSLRTPEEQACHSPGCPAQLRKC*KPSYWE
Trigger: CTCCCAGTACGAAGGCTTCCAGCATTTCCTCAGCTG...TGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp ACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGGCGCCTTTTTGTAGATaGATGATGTCAGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: TEGRWAWNPSHGWASRPLAPFCR*MMSGKL
Trigger: CAACTTCCCTGACATCATCCATCTACAAAAAGGCGC...CAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GGGCTTATACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCTCGTCACTCATGCGTTaGCTCTCCTTCACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GLIPQHLESEEGRMLQWSSSLMR*LSFTLA
Trigger: CGCCAAGGTGAAGGAGAGCCAACGCATGAGTGACGA...GGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GGGCTTATACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCTCCCCCAGTCACTGCTaGTATAGGGAGGTCGGGAAA +
Preference number: 4 (lower is better)
Translates to: GLIPQHLESEEGRMLQWSSPSHC*YREVGK
Trigger: TTTCCCGACCTCCCTATACCAGCAGTGACTGGGGGA...GGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGACCTGCTTCGAGTGTaGGGAGTTATTGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPDLLRV*GVIAGE
Trigger: TTCACCAGCAATAACTCCCCACACTCGAAGCAGGTC...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GTAGCTGTCCAGGGCAGAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGGAGGGCAGGTGGGCATaGAATCCCTCGCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: VAVQGRKRSLVFHPLRAKEGRWA*NPSHGW
Trigger: CCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTC...CTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTCTGCCCTGGACAGCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACCTCTGCTCCAGCCAGTaGTGCAGCCACGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: LRSWVWTCFECGELLLVNLCSSQ*CSHGTV
Trigger: CACTGTGCCGTGGCTGCACCACTGGCTGGAGCAGAG...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCCACTGGTGCTTTGAATaGATGGCAAGGCATGTGTGG +
Preference number: 4 (lower is better)
Translates to: PAESGTSAWHVTRQESAIHWCFE*MARHVW
Trigger: CCACACATGCCTTGCCATCCATTCAAAGCACCAGTG...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCAGCAGGCTTGGCTCCTaGAGGCCTGAGTCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCSRLGS*RPESAG
Trigger: GCCCGCTGACTCAGGCCTCCAGGAGCCAAGCCTGCT...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGGCACATCACCCAGGATaGAGGCCTCCACTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVAHHPG*RPPLQN
Trigger: GTTCTGGAGTGGAGGCCTTCATCCTGGGTGATGTGC...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGAGAAAGTCCCAAATCTaGCCTAATGTTGACCAAGGG +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRRKSQI*PNVDQG
Trigger: CCCTTGGTCAACATTAGGTCAGATTTGGGACTTTCT...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCACATTCGTGAGTCTGTaGGTGTGTAGACACGTGGAA +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPTFVSL*VCRHVE
Trigger: TTCCACGTGTCTACACACTCACAGACTCACGAATGT...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCTGTGGGCAGGTGTGTaGCTGCGTGTGCTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVLWAGV*LRVLVV
Trigger: CACAACAAGCACACGCAGTCACACACCTGCCCACAG...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCGGCAGTATGACTGTGTaGGCATACAGGCATGCTTAT +
Preference number: 4 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCGSMTV*AYRHAY
Trigger: ATAAGCATGCCTGTATGCTCACACAGTCATACTGCC...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CCCAGAGTATCCCCTGCCCTGCTGGGTGATAAGGCCAGCCACCACTGCTCCCTGTGTTCAATAAGGAGCTaGACTTGGTGGTATCCAGTC +
Preference number: 4 (lower is better)
Translates to: PRVSPALLGDKASHHCSLCSIRS*TWWYPV
Trigger: GACTGGATACCACCAAGTTCAGCTCCTTATTGAACA...CAGGGAGCAGTGGTGGCTGGCCTTATCACCCAGCAGGGCAGGGGATACTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTAAGGGAGGAAACGAGGCAGGGAGCTGGGTTTaGGTCCAGCCCCGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: EREALFSTPSEQSKGGNEAGSWV*VQPRQR
Trigger: TCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGC...CTCGTTTCCTCCCTTACTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGGAGCAGGCCCAGCTCTaGTGCCACAGTGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKEQAQL*CHSAEL
Trigger: CAGCTCAGCACTGTGGCATCAGAGCTGGGCCTGCTC...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569152.1
CDS-3UTR GCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGATGCCCAGACCGGGGATaGTCACAAGGCAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRCPDRG*SQGSPR
Trigger: TCTTGGACTGCCTTGTGAGCATCCCCGGTCTGGGCA...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp GCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTGGGGGCAGCGCCTGCGAATaGCGTCTGCCTCGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: APVFFLLGFPLCNRKDLGGSACE*RLPRPA
Trigger: TGCAGGACGAGGCAGACGGCATTCGCAGGCGCTGCC...CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCTGTCACAGCCCTGGGTaGCCAGCATCCGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCCHSPG*PASDPR
Trigger: CCTTGGGTCGGATGCTGGGCACCCAGGGCTGTGACA...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp AGCCCTGGGTGCCCAGCATCCGACCCAAGGGTGCAGCAGGCCTCGGTGTCTGCTCATTCTTCAAAACACTaGCCAAATGTTGCCTACTCT +
Preference number: 4 (lower is better)
Translates to: SPGCPASDPRVQQASVSAHSSKH*PNVAYS
Trigger: AGAGTAGGCAACATTTGGGCAGTGTTTTGAAGAATG...AGCAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATGCTGGGCACCCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCAAAGCGTACCTAACTTaGTTGGAAAGTAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPKAYLT*LESKGE
Trigger: CTCTCCCTTACTTTCCAAGCAAGTTAGGTACGCTTT...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGAGGAGGGGAGGATGCTaGAATGGTCCCCTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKRRGGC*NGPLPE
Trigger: CTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCT...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp GCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTGGGCCGAGGAGGGGAGGATaGTGCAATGGTCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: APVFFLLGFPLCNRKDLGPRRGG*CNGPLP
Trigger: GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGG...CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp AGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTCCGAGGAGGGGAGGATaGTGCAATGGTCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SPSPPCTVWQALVILQNTPRRGG*CNGPLP
Trigger: GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGG...AGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACCTAGCTCCTCCTGCCTaGTGGCACCTTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LRSWVWTCFECGELLLVNLAPPA*WHLPPA
Trigger: TGCTGGTGGAAGGTGCCAGCAGGCAGGAGGAGCTAG...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTTCCCCCACCGCACCTaGTGGCCCTTCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: LRSWVWTCFECGELLLVNFPHRT*WPFSIF
Trigger: GAAGATGGAGAAGGGCCAGCAGGTGCGGTGGGGGAA...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCAAAGTAGCCACTGGTaGTTTGAATGGATGGCAAGG +
Preference number: 4 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCQSSHW*FEWMAR
Trigger: CCTTGCCATCCATTCAAAGCACCAGTGGCTACTTTG...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGGGCCCATTTCAATaGAGTATGTCTCAGCGATCT +
Preference number: 4 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPEGPFQ*SMSQRS
Trigger: AGATCGCTGAGACATACTCCATTGAAATGGGCCCTC...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTGAGCAGGCAAATGGGTaGGGATTGGCCTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFEQANG*GLAFHW
Trigger: CCAGTGGAAGGCCAATCCCCACCCATTTGCCTGCTC...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGTGGGAGAGCACAGGGTaGCTGGTCATGTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVWESTG*LVMWSI
Trigger: GATGGACCACATGACCAGCCACCCTGTGCTCTCCCA...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGTGCTCGGTGGGGATCTaGAAGGTGAGCAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVCSVGI*KVSRKL
Trigger: CAGCTTCCTGCTCACCTTCCAGATCCCCACCGAGCA...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGACTGAGGGCCCAAAAGTaGAGGGGAGTCAGAGGCCTA +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRLRAQK*RGVRGL
Trigger: TAGGCCTCTGACTCCCCTCCACTTTTGGGCCCTCAG...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGCACAACAGGAAGGATCTTaGGAAGACAGTGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: PSLRTPEEQACHSPGCPAQQEGS*EDSATE
Trigger: CTCTGTGGCACTGTCTTCCCAAGATCCTTCCTGTTG...TGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
3UTR CAA 72 bp AGTGTGACTCTAAGGAGTGATGGCAGGGAGCTGGGTTaGAGTCCAGCCCCGCCAGAGATTCCCTGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: SVTLRSDGRELG*SPAPPEIPCVN
Trigger: GTTCACACAGGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAGAGTCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCAGCATGGTTGGTGCTaGTGCCAGAACGGACGATCT +
Preference number: 4 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFQHGWC*CQNGRS
Trigger: AGATCGTCCGTTCTGGCATCAGCACCAACCATGCTG...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATGGCTCTAGGGGAGGCTaGGACCCTGGCCTGACCTTC +
Preference number: 4 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDGSRGG*DPGLTF
Trigger: GAAGGTCAGGCCAGGGTCTCAGCCTCCCCTAGAGCC...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGAGCAGCAGTGGCCAGGTaGGCAAGCAAAATAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRAAVAR*ASKIGS
Trigger: AGAGCCTATTTTGCTTGCTCACCTGGCCACTGCTGC...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGCATCTGCCTGGCATGTaGCGAGGCAGGAATCGGCCA +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKHLPGM*RGRNRP
Trigger: TGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATG...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CCAGTGGAATGCTGTGGTCCCTTCTATGAGCTTCCAGAAATCCCTCACTTAAACGCCTACTGGGGCTGCTaGGCAGATCCAGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: PVECCGPFYELPEIPHLNAYWGC*ADPGHS
Trigger: GCTGTGGCCTGGATCTGCTCAGCAGCCCCAGTAGGC...GTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCGTGGTCTCTTTTGTTTaGCTAATTCCTCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPVVSFV*LIPQQF
Trigger: AAACTGCTGAGGAATTAGGCAAACAAAAGAGACCAC...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCCCATGGCCCAGAAACTaGCCTATCAGGTCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCPWPRN*PIRSPG
Trigger: GCCCGGAGACCTGATAGGGCAGTTTCTGGGCCATGG...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCCTGCAAGTCCTGGTaGTCGGTGGGGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LRSWVWTCFECGELLLVNSCKSW*SVGIWK
Trigger: CTTCCAGATCCCCACCGAGCACCAGGACTTGCAGGA...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCTGCCACACACACACCTaGCCCAGCCCAGAGACCTCA +
Preference number: 4 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCCHTHT*PSPETS
Trigger: TGAGGTCTCTGGGCTGGGGCAGGTGTGTGTGTGGCA...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTCCAAAGGAGAGCCAAGTCTCAACCAGTACCCTCCTCTCATCTGTGGATGAACCCACACTGCCTCGCTTaGCAGATGCCAGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LQRRAKSQPVPSSHLWMNPHCLA*QMPGCP
Trigger: AGGACAGCCTGGCATCTGCCAAGCGAGGCAGTGTGG...GTTCATCCACAGATGAGAGGAGGGTACTGGTTGAGACTTGGCTCTCCTTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACGAGCAGGCAAATGGGTaGGGATTGGCCTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: LRSWVWTCFECGELLLVNEQANG*GLAFHW
Trigger: CCAGTGGAAGGCCAATCCCCACCCATTTGCCTGCTC...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTGGGTGGCTGGTCATGTaGTCCATCCAGAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFGWLVM*SIQRMS
Trigger: ACTCATCCTCTGGATGGACCACATGACCAGCCACCC...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGACGTCCTGCAAGTCCTaGTGCTCGGTGGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKTSCKS*CSVGIW
Trigger: CCAGATCCCCACCGAGCACCAGGACTTGCAGGACGT...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTTCCCCCAGTCACTGCTaGTATAGGGAGGTCGGGAAA +
Preference number: 4 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFSPSHC*YREVGK
Trigger: TTTCCCGACCTCCCTATACCAGCAGTGACTGGGGGA...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACCCTACAGGAGGGAGATaGCCTGTAGCCCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHPTGGR*PVAPSC
Trigger: GCAGGAGGGGGCTACAGGCCATCTCCCTCCTGTAGG...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTAGGACCCTGAGATCCTaGGTTTGGACCTGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFRTLRS*VWTCFE
Trigger: CTCGAAGCAGGTCCAAACCCAGGATCTCAGGGTCCT...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp AAGCTCCCTGGTCCCTGGTCTAGCCAACCTTCCCTGACGGCCTTGACCCTGGAATGCCCTCCGCCTTTCTaGGATCCAAACAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: KLPGPWSSQPSLTALTLECPPPF*DPNRKS
Trigger: ACTTTTTCTGTTTGGATCCCAGAAAGGCGGAGGGCA...TTCCAGGGTCAAGGCCGTCAGGGAAGGTTGGCTAGACCAGGGACCAGGGAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGACTTTTGAGGTTCTGTaGAAAATTTGTGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRTFEVL*KICAHH
Trigger: GTGGTGGGCACAAATTTTCCACAGAACCTCAAAAGT...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGAGCAAGCATGGCTTTGTaGCGGTGTGTGCCCGAGTAT +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRASMAL*RCVPEY
Trigger: ATACTCGGGCACACACCGCCACAAAGCCATGCTTGC...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCAGTGGAATGCTGTGGTCCCTTCTATGAGCTTCCAGAAATCCCTCACTTAAACTCCTGCCCCAGCCAGTaGAGAGGGGAACCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: PVECCGPFYELPEIPHLNSCPSQ*RGEPEP
Trigger: CGGCTCTGGTTCCCCTCTCCACTGGCTGGGGCAGGA...GTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GGGCTTATACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCTCACATTTCAGCCGTTaGGTTCACCAGCCTCCTATC +
Preference number: 4 (lower is better)
Translates to: GLIPQHLESEEGRMLQWSSHFSR*VHQPPI
Trigger: GATAGGAGGCTGGTGAACCCAACGGCTGAAATGTGA...GGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AAGCTCCCTGGTCCCTGGTCTAGCCAACCTTCCCTGACGGCCTTGACCCTGGAATACACTTCTACCATGTaGGGAATGGGGGAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: KLPGPWSSQPSLTALTLEYTSTM*GMGEEN
Trigger: GTTTTCCTCCCCCATTCCCCACATGGTAGAAGTGTA...TTCCAGGGTCAAGGCCGTCAGGGAAGGTTGGCTAGACCAGGGACCAGGGAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GGGCTTATACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCAGTTCTACACATCCCTaGGGAAAGAAAGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GLIPQHLESEEGRMLQWSSSTHP*GKKGSP
Trigger: TGGGGACCCTTTCTTTCCCCAGGGATGTGTAGAACT...GGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTTCCATCTGGAAGGAATaGCTGATGGCCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFSIWKE*LMAWKA
Trigger: TGCCTTCCAGGCCATCAGTCATTCCTTCCAGATGGA...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGATTCCAGAAGTTCCTCTaGGGACGCTATGCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRFQKFL*GRYALN
Trigger: GTTCAGGGCATAGCGTCCTCAGAGGAACTTCTGGAA...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTGGTGTGGCTGTGTCTaGCAAAGTAGCCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: LRSWVWTCFECGELLLVNWCGCV*QSSHWC
Trigger: GCACCAGTGGCTACTTTGTCAGACACAGCCACACCA...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCTCTCCGCCCGGCGTTTaGCCATCTTCCACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCSPPGV*PSSTAC
Trigger: ACAAGCAGTGGAAGATGGGCAAACGCCGGGCGGAGA...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTGGCCTGGAAGGCACTaGCCAGCTTCTGGAATTCCT +
Preference number: 4 (lower is better)
Translates to: LRSWVWTCFECGELLLVNWPGRH*PASGIP
Trigger: AGGAATTCCAGAAGCTGGGCAGTGCCTTCCAGGCCA...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGGGCCCTCGTCACTCATaGGTTGGCTCTCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKGPRHS*VGSPSP
Trigger: AGGTGAAGGAGAGCCAACGCATGAGTGACGAGGGCC...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGAGCTGTCACCGTGCAGTaGCATCTTCAGACCCTTCAT +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRAVTVQ*HLQTLH
Trigger: ATGAAGGGTCTGAAGATGGCACTGCACGGTGACAGC...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CTCCAAAGGAGAGCCAAGTCTCAACCAGTACCCTCCTCTCATCTGTGGATGAACGAGCTCCTGAGTCACTaGAGCTGTCACCGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LQRRAKSQPVPSSHLWMNELLSH*SCHRAV
Trigger: CACTGCACGGTGACAGCTGCAGTGACTCAGGAGCTC...GTTCATCCACAGATGAGAGGAGGGTACTGGTTGAGACTTGGCTCTCCTTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGTTGTACAAGCTCACCTaGGCTCCGGGAGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKLYKLT*APGEPA
Trigger: TGCAGGCTCTCCCGGAGCCCAGGTGAGCTTGTACAA...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCAGTGGAATGCTGTGGTCCCTTCTATGAGCTTCCAGAAATCCCTCACTTAAACAGGCCATGTGCTGGCTaGGGTAGGCACCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PVECCGPFYELPEIPHLNRPCAG*GRHQGR
Trigger: CCTACCCTGGTGCCTACCCCAGCCAGCACATGGCCT...GTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTGGGCAAATGGGTGGGGATTaGCCTTCCACTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: APVFFLLGFPLCNRKDLGQMGGD*PSTGGH
Trigger: GTGGCCCCCAGTGGAAGGCCAATCCCCACCCATTTG...CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACACGTCCTGCAAGTCCTaGTGCTCGGTGGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHTSCKS*CSVGIW
Trigger: CCAGATCCCCACCGAGCACCAGGACTTGCAGGACGT...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCGTGTCACCAGGGATCTaGGGCCCAGGGCTTATACCT +
Preference number: 4 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCVSPGI*GPGLIP
Trigger: AGGTATAAGCCCTGGGCCCCAGATCCCTGGTGACAC...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGCAGAATCTCATCCAATaGCTCTCAGGAGCAATTAGG +
Preference number: 4 (lower is better)
Translates to: LESEEGRMLQWSPARDKLQNLIQ*LSGAIR
Trigger: CCTAATTGCTCCTGAGAGCCATTGGATGAGATTCTG...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGAGTACCCAGGACGGTTTaGGGAAGAGACACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRVPRTV*GRDTAS
Trigger: AGAAGCTGTGTCTCTTCCCCAAACCGTCCTGGGTAC...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTACTTTCCAGGCACCATaGGTTAGGAGGAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFTFQAP*VRRSIP
Trigger: GGGAATGCTCCTCCTAACCCATGGTGCCTGGAAAGT...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCACGTGGAAGACATATaGCTCTGTCATCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFHVEDI*LCHLGG
Trigger: CCCTCCCAGATGACAGAGCCATATGTCTTCCACGTG...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CAA 72 bp AGGTGCAGTCCAGGCACAGAGATGCTTATGACACCTTaGCTCTGTGCAAGCATGGCTTTGTGGCGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RCSPGTEMLMTP*LCASMALWRCV
Trigger: CACACACCGCCACAAAGCCATGCTTGCACAGAGCAAAGGTGTCATAAGCATCTCTGTGCCTGGACTGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTGGGAAAGCTACCCTGGTTTaGGAGGAAGCCACTGCCCCC +
Preference number: 4 (lower is better)
Translates to: APVFFLLGFPLCNRKDLGKATLV*EEATAP
Trigger: GGGGGCAGTGGCTTCCTCTCAAACCAGGGTAGCTTT...CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTAAGGGAGGAAACGAGGCTTCCGCTTTTCGATaGAGTCCTCCTCGAAGCGGC +
Preference number: 4 (lower is better)
Translates to: EREALFSTPSEQSKGGNEASAFR*SPPRSG
Trigger: GCCGCTTCGAGGAGGACTTCATCGAAAAGCGGAAGC...CTCGTTTCCTCCCTTACTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACAGAGCCCAAGGACCCTaGGATCCTGGGTTTGGACCT +
Preference number: 4 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHRAQGP*DPGFGP
Trigger: AGGTCCAAACCCAGGATCTCAGGGTCCTTGGGCTCT...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAAGACTCCACTTCCTaGTGCTTCTCCTGGATCCAA +
Preference number: 4 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVQDSTS*CFSWIQ
Trigger: TTGGATCCAGGAGAAGCATCAGGAAGTGGAGTCTTG...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp GAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTAAGGGAGGAAACGAGCTCAGCACCCACAGATaGTGTCCAGTCTCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: EREALFSTPSEQSKGGNELSTHR*CPVSPS
Trigger: AGAGGGGGAGACTGGACAGCATCTGTGGGTGCTGAG...CTCGTTTCCTCCCTTACTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp GTAGCTGTCCAGGGCAGAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGACCAGGTCCTCATCCTaGTGGATGCTGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VAVQGRKRSLVFHPLRAKTRSSS*WMLISS
Trigger: GGAGGAAATCAGCATCCAGCAGGATGAGGACCTGGT...CTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTCTGCCCTGGACAGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTCCTGCAAGTCCTGGTaGTCGGTGGGGATCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHSCKSW*SVGIWK
Trigger: CTTCCAGATCCCCACCGAGCACCAGGACTTGCAGGA...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CCAGTGGAATGCTGTGGTCCCTTCTATGAGCTTCCAGAAATCCCTCACTTAAACGCCACAGTGCTGAGCTaGAGGACGCTGTCGTCCATC +
Preference number: 4 (lower is better)
Translates to: PVECCGPFYELPEIPHLNATVLS*RTLSSI
Trigger: GATGGACGACAGCGTCCTGCAGCTCAGCACTGTGGC...GTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CTAAGGAGTGATGGCAGGGAGCTGGGTTTGAGTCCAGCCCCGCCAGAGATTCCCAAAGCGTACCTAACTTaGTTGGAAAGTAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRSDGRELGLSPAPPEIPKAYLT*LESKGE
Trigger: CTCTCCCTTACTTTCCAAGCAAGTTAGGTACGCTTT...GGGAATCTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCCATCACTCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCCTGGGTTTGGACCTaGTTCGAGTGTGGGGAGTTA +
Preference number: 4 (lower is better)
Translates to: LRSWVWTCFECGELLLVNSWVWT*FECGEL
Trigger: TAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGA...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCGCTCAGAGCCCCTTCTaGAGATGGCTACATGGATGG +
Preference number: 4 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCAQSPF*RWLHGW
Trigger: CCATCCATGTAGCCATCTGCAGAAGGGGCTCTGAGC...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGAGCACTCGCAGCTGAATaGCGCTTACACAGTTCAATC +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRALAAE*RLHSSI
Trigger: GATTGAACTGTGTAAGCGCCATTCAGCTGCGAGTGC...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGATGTCTCAGCGATCTTaGCCATCATGGGCACATCAC +
Preference number: 4 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVMSQRS*PSWAHH
Trigger: GTGATGTGCCCATGATGGCCAAGATCGCTGAGACAT...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTGGGTGGAAGCCTTCGTACTaGGAGAGCACAGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: APVFFLLGFPLCNRKDLGWKPSY*ESTGWL
Trigger: CAGCCACCCTGTGCTCTCCCAGTACGAAGGCTTCCA...CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGGAAGCCTTCGTACTaGGAGAGCACAGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHWKPSY*ESTGWL
Trigger: CAGCCACCCTGTGCTCTCCCAGTACGAAGGCTTCCA...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACGGCTCTCCTTCACCTTaGCGAAGGCGCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: LRSWVWTCFECGELLLVNGSPSP*RRRLFV
Trigger: TACAAAAAGGCGCCTTCGCCAAGGTGAAGGAGAGCC...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTCGAGCTCACGGCGCTaGTGGAAGTGGTTCATCTCG +
Preference number: 4 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHSSSRR*WKWFIS
Trigger: CGAGATGAACCACTTCCACCAGCGCCGTGAGCTCGA...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGAGGCCAGAATCCCCATaGAAAGCGTACCTAACTTGC +
Preference number: 4 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVRPESP*KAYLTC
Trigger: GCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCT...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTGGGGGGAGGATGCTGCAATaGTCCCCTGCCCGAGATAAG +
Preference number: 4 (lower is better)
Translates to: APVFFLLGFPLCNRKDLGGRMLQ*SPARDK
Trigger: CTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCC...CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTAAGGGAGGAAACGAGGTGTCACCAGGGATCTaGGGCCCAGGGCTTATACCT +
Preference number: 4 (lower is better)
Translates to: EREALFSTPSEQSKGGNEVSPGI*GPGLIP
Trigger: AGGTATAAGCCCTGGGCCCCAGATCCCTGGTGACAC...CTCGTTTCCTCCCTTACTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGAGCCCCTTCTGCAGATaGCTACATGGATGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKSPFCR*LHGWQS
Trigger: GCTCTGCCATCCATGTAGCCATCTGCAGAAGGGGCT...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCTGCTCTGTGCAAGCATaGCTTTGTGGCGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCCSVQA*LCGGVC
Trigger: GCACACACCGCCACAAAGCCATGCTTGCACAGAGCA...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CAA 72 bp TCCCATCTTCCCTCTGGCCAAGTCTCAGTCTCTTTGTaGCGAAAGGGAATAAATGCTGCCTACTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SHLPSGQVSVSL*RKGINAAYWGC
Trigger: GCAGCCCCAGTAGGCAGCATTTATTCCCTTTCGCAACAAAGAGACTGAGACTTGGCCAGAGGGAAGATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CAA 72 bp AGGTCCCATCTTCCCTCTGGCCAAGTCTCAGTCTCTTaGTTGCGAAAGGGAATAAATGCTGCCTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: RSHLPSGQVSVS*LRKGINAAYWG
Trigger: GCCCCAGTAGGCAGCATTTATTCCCTTTCGCAACAAAGAGACTGAGACTTGGCCAGAGGGAAGATGGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGAGAACGCACAAAGCATaGGAAACGGTTGAGGTTACG +
Preference number: 4 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVRTHKA*ETVEVT
Trigger: CGTAACCTCAACCGTTTCTCATGCTTTGTGCGTTCT...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGAGGCAGCTGAGGAAATaGTGGAAGCCTTCGTACTGG +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKRQLRK*WKPSYW
Trigger: CCAGTACGAAGGCTTCCAGCATTTCCTCAGCTGCCT...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGGCAGCGCCTGCGAATaGCGTCTGCCTCGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFGSACE*RLPRPA
Trigger: TGCAGGACGAGGCAGACGGCATTCGCAGGCGCTGCC...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCCTCTATTCTCACCCCTaGTGTGCCCCACTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCLYSHP*CAPLLR
Trigger: CCTTAGAAGTGGGGCACAGCAGGGGTGAGAATAGAG...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CCAGTGGAATGCTGTGGTCCCTTCTATGAGCTTCCAGAAATCCCTCACTTAAACTTGGGGAGGAGATGGTaGAGGAATGTTCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: PVECCGPFYELPEIPHLNLGRRW*RNVPPA
Trigger: GGCGGGAGGAACATTCCTGCACCATCTCCTCCCCAA...GTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTTCAAAGCAATGTCCATaGCCCAGAAACTGCCCTATC +
Preference number: 4 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFSKQCP*PRNCPI
Trigger: GATAGGGCAGTTTCTGGGCCATGGACATTGCTTTGA...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTAAGGGAGGAAACGAGCACAGAGCAGGCAAATaGGTGGGGATTGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: EREALFSTPSEQSKGGNEHRAGK*VGIGLP
Trigger: TGGAAGGCCAATCCCCACCCATTTGCCTGCTCTGTG...CTCGTTTCCTCCCTTACTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACATTTGGTCTGTTTTGTaGGGTCCTCCACAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LRSWVWTCFECGELLLVNIWSVL*GPPQSR
Trigger: CCTGCTCTGTGGAGGACCCCACAAAACAGACCAAAT...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATTGGGAGAGCACAGGGTaGCTGGTCATGTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDWESTG*LVMWSI
Trigger: GATGGACCACATGACCAGCCACCCTGTGCTCTCCCA...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTCGTCACTCATGCGTTaGCTCTCCTTCACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHSSLMR*LSFTLA
Trigger: CGCCAAGGTGAAGGAGAGCCAACGCATGAGTGACGA...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGGTCTTCCCTGACCAGTaGAATGCTGTGGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKVFPDQ*NAVVPS
Trigger: AGAAGGGACCACAGCATTCCACTGGTCAGGGAAGAC...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACGACCTGCTTCGAGTGTaGGGAGTTATTGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: LRSWVWTCFECGELLLVNDLLRV*GVIAGE
Trigger: TTCACCAGCAATAACTCCCCACACTCGAAGCAGGTC...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp AGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTAGGACCCTGAGATCCTaGGTTTGGACCTGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: SPSPPCTVWQALVILQNTRTLRS*VWTCFE
Trigger: CTCGAAGCAGGTCCAAACCCAGGATCTCAGGGTCCT...AGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACCTGCAGATGGCTACATaGATGGCAGAGCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LRSWVWTCFECGELLLVNLQMAT*MAELRR
Trigger: TCTTCTCAGCTCTGCCATCCATGTAGCCATCTGCAG...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGTACCAGGAGCAGGCCTaGCATTATCCCAAGACTCCA +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKYQEQA*HYPKTP
Trigger: TGGAGTCTTGGGATAATGCCAGGCCTGCTCCTGGTA...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTAAGGGAGGAAACGAGTCGGGAACATCTGCCTaGCATGTGACGAGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: EREALFSTPSEQSKGGNESGTSA*HVTRQE
Trigger: TTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGA...CTCGTTTCCTCCCTTACTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGCATCCTGCTGGATGCTaGTTTCCTCCTTGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKHPAGC*FPPCSH
Trigger: GTGAGAACAAGGAGGAAATCAGCATCCAGCAGGATG...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCAGCCAGCCATCCAGTaGGGTCTCGCTAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDQPAIQ*GLAKDD
Trigger: GTCATCTTTAGCGAGACCTCACTGGATGGCTGGCTG...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCAGCATGGGTGGGTGTaGGCTTGTAGGAGATGTAGC +
Preference number: 4 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDQHGWV*ACRRCS
Trigger: GCTACATCTCCTACAAGCTCACACCCACCCATGCTG...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATGGTCCATCCAGAGGATaGGTCTCCGCTTCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDGPSRG*VSASAF
Trigger: AAAAGCGGAAGCGGAGACTCATCCTCTGGATGGACC...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGCTGAGACCCTGGCCTaGCCTTCACTGACTGACCGG +
Preference number: 4 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFAETLA*PSLTDR
Trigger: CCGGTCAGTCAGTGAAGGTCAGGCCAGGGTCTCAGC...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp GTAGCTGTCCAGGGCAGAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTCAGTCATACTGCATTaGCTCTGTCTGTGTCTGACC +
Preference number: 4 (lower is better)
Translates to: VAVQGRKRSLVFHPLRAKSVILH*LCLCLT
Trigger: GGTCAGACACAGACAGAGTCAATGCAGTATGACTGA...CTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTCTGCCCTGGACAGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATTATACCTCAGCACCTTaGGTCCGAGGAGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDYTSAP*VRGGED
Trigger: ATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATA...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGAGATCCAAGTCCCTCCTaGGAAAAGTATCAGACTGAT +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRDPSPS*EKYQTD
Trigger: ATCAGTCTGATACTTTTCTCAGGAGGGACTTGGATC...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTAAGGGAGGAAACGAGAAGAGATGCAGGATCTaGGGTCTGCTTCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: EREALFSTPSEQSKGGNEKRCRI*GLLPSP
Trigger: TGGGGATGGAAGCAGACCTCAGATCCTGCATCTCTT...CTCGTTTCCTCCCTTACTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTAAGGGAGGAAACGAGTGTATGTGGTGCTTGTaGCTGGCTCTACTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: EREALFSTPSEQSKGGNECMWCL*LALLPL
Trigger: AAGGGGGAGTAGAGCCAGTCACAAGCACCACATACA...CTCGTTTCCTCCCTTACTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CCAGTGGAATGCTGTGGTCCCTTCTATGAGCTTCCAGAAATCCCTCACTTAAACTGTAAACGGAGCTCCTaGGTCACTGCAGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: PVECCGPFYELPEIPHLNCKRSS*VTAAVT
Trigger: GGTGACAGCTGCAGTGACTCAGGAGCTCCGTTTACA...GTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATATCACCACCCTCGCGTaGACGCACACACTCAACAGT +
Preference number: 4 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDITTLA*THTLNS
Trigger: ACTGTTGAGTGTGTGCGTGCACGCGAGGGTGGTGAT...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTTGTCACAGCCCTGGGTaGCCAGCATCCGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFCHSPG*PASDPR
Trigger: CCTTGGGTCGGATGCTGGGCACCCAGGGCTGTGACA...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp AGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTTCCTGGGTTTGGACCTaGTTCGAGTGTGGGGAGTTA +
Preference number: 4 (lower is better)
Translates to: SPSPPCTVWQALVILQNTSWVWT*FECGEL
Trigger: TAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGA...AGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp AGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTCTTTGTGGCGGTGTGTaGCCGAGTATGTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: SPSPPCTVWQALVILQNTLCGGV*PSMCHC
Trigger: ACAGTGACACATACTCGGGCACACACCGCCACAAAG...AGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGACACACTCAACAGTTTaGAGTTTGGAGAGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVTHSTV*SLESEL
Trigger: GAGCTCACTCTCCAAACTCCAAACTGTTGAGTGTGT...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCAGTGGAATGCTGTGGTCCCTTCTATGAGCTTCCAGAAATCCCTCACTTAAACCTGAGATCCTGGGTTTaGACCTGCTTCGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PVECCGPFYELPEIPHLNLRSWV*TCFECG
Trigger: CCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG...GTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTATGTGTAATAGCGTGTaGCAGTATGACTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFMCNSV*QYDCVS
Trigger: GCTCACACAGTCATACTGCCACACGCTATTACACAT...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTCCTTCAGAGGCAGCCTaGCCCAGAGGATTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFPSEAA*PRGLAQ
Trigger: CTGGGCCAATCCTCTGGGCCAGGCTGCCTCTGAAGG...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CAA 72 bp ATGCTTATGACACCTTTGCTCTGTGCAAGCATGGCTTaGTGGCGGTGTGTGCCCGAGTATGTGTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: MLMTPLLCASMA*WRCVPEYVSLC
Trigger: ACACAGTGACACATACTCGGGCACACACCGCCACAAAGCCATGCTTGCACAGAGCAAAGGTGTCATAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CAA 72 bp GCCTCAGGCGCCCATCTGTTCAATAAGGAGCTGAACTaGGTGGTATCCAGTCATCCCAATTGCATCCCTAGA +
Preference number: 4 (lower is better)
Translates to: ASGAHLFNKELN*VVSSHPNCIPR
Trigger: TCTAGGGATGCAATTGGGATGACTGGATACCACCAAGTTCAGCTCCTTATTGAACAGATGGGCGCCTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACCTGTGGTCCCTTCTATaGGCTTCCAGAAATCCCTCA +
Preference number: 4 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHLWSLL*ASRNPS
Trigger: TGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAG...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGGTATGTGTCACTGTGTaGGGCTATGACCATGTGCAT +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKVCVTV*GYDHVH
Trigger: ATGCACATGGTCATAGCCTCACACAGTGACACATAC...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAAGCCTCGCTTGGCAGATaGCAGGCTGTCCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: VIAGELKYTVTFESLLQEASLGR*QAVLPL
Trigger: GAGCGGCAGGACAGCCTGGCATCTGCCAAGCGAGGC...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CCAGTGGAATGCTGTGGTCCCTTCTATGAGCTTCCAGAAATCCCTCACTTAAACAGGTCATTCTTGGGCTaGTCAGCAAACATCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PVECCGPFYELPEIPHLNRSFLG*SANISP
Trigger: CGGGGAGATGTTTGCTGAGCAGCCCAAGAATGACCT...GTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACAGAGGTTGTCATACATaGGCAGGGTCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHRGCHT*AGSSPA
Trigger: AGCTGGAGAAGACCCTGCGCATGTATGACAACCTCT...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTCTATTCTCACCCCTaGTGTGCCCCACTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDLYSHP*CAPLLR
Trigger: CCTTAGAAGTGGGGCACAGCAGGGGTGAGAATAGAG...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CTCCAAAGGAGAGCCAAGTCTCAACCAGTACCCTCCTCTCATCTGTGGATGAACTTGCTCCTGGGCCACTaGGTTTTCAAAAATCCGGAA +
Preference number: 4 (lower is better)
Translates to: LQRRAKSQPVPSSHLWMNLLLGH*VFKNPE
Trigger: TTCCGGATTTTTGAAAACCCAGTGGCCCAGGAGCAA...GTTCATCCACAGATGAGAGGAGGGTACTGGTTGAGACTTGGCTCTCCTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTCCTCAAAGCTACCCTaGTTTGAGAGGAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHSSKLP*FERKPL
Trigger: CAGTGGCTTCCTCTCAAACCAGGGTAGCTTTGAGGA...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CCAGTGGAATGCTGTGGTCCCTTCTATGAGCTTCCAGAAATCCCTCACTTAAACGGCTCTCCTTCACCTTaGCGAAGGCGCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: PVECCGPFYELPEIPHLNGSPSP*RRRLFV
Trigger: TACAAAAAGGCGCCTTCGCCAAGGTGAAGGAGAGCC...GTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTAAGGGAGGAAACGAGAGGCCAGAATCCCCATaGAAAGCGTACCTAACTTGC +
Preference number: 4 (lower is better)
Translates to: EREALFSTPSEQSKGGNERPESP*KAYLTC
Trigger: GCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCT...CTCGTTTCCTCCCTTACTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTATGGAATCCCTCGCATaGCTGGGCAAGCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFMESLA*LGKQAP
Trigger: AGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCCAT...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTGGGCCCTCCTCTCATCTGTaGATGAACAGATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: APVFFLLGFPLCNRKDLGPSSHL*MNRSKS
Trigger: GCTCTTGGATCTGTTCATCCACAGATGAGAGGAGGG...CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATACAGGCATGCTTATGTaGCGTATGTGCCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDTGMLM*RMCLWA
Trigger: TGCCCACAGGCACATACGCCACATAAGCATGCCTGT...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGATATGTTGAACAGAGCTaGGTTTCACAATCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRYVEQS*VSQSAL
Trigger: AAGGGCTGATTGTGAAACCCAGCTCTGTTCAACATA...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CAA 72 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATaGTGCAACAGGAAGGATCTTGGGAAGACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: KQAPVFFLLGFP*CNRKDLGKTVP
Trigger: TGGCACTGTCTTCCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAAACGCTGACCCTGCTCTaGATCCCAGGAACCCCGTCC +
Preference number: 4 (lower is better)
Translates to: VIAGELKYTVTFESLLQETLTLL*IPGTPS
Trigger: GGACGGGGTTCCTGGGATTCAGAGCAGGGTCAGCGT...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCAGAAGAGACTCACTCTaGAACCACCATTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCRRDSL*NHHSRN
Trigger: GTTTCTGGAATGGTGGTTTCAGAGTGAGTCTCTTCT...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTTCCCAGGGGCACCCATaGCTCCTTGAAAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFSQGHP*LLESSF
Trigger: GAAGGAGCTTTCAAGGAGTCATGGGTGCCCCTGGGA...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAAGGCCTCGAGGGCTCCTaGCTCTATTCTCACCCCTGC +
Preference number: 4 (lower is better)
Translates to: VIAGELKYTVTFESLLQEGLEGS*LYSHPC
Trigger: GCAGGGGTGAGAATAGAGTCAGGAGCCCTCGAGGCC...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTAGAGCCCAAGGACCCTaGGATCCTGGGTTTGGACCT +
Preference number: 4 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFRAQGP*DPGFGP
Trigger: AGGTCCAAACCCAGGATCTCAGGGTCCTTGGGCTCT...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp GTAGCTGTCCAGGGCAGAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGGTCCCCAAATTGATGTaGGATTACACTTCTACCATG +
Preference number: 4 (lower is better)
Translates to: VAVQGRKRSLVFHPLRAKVPKLM*DYTSTM
Trigger: CATGGTAGAAGTGTAATCTCACATCAATTTGGGGAC...CTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTCTGCCCTGGACAGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGGCCCTCGTCACTCATaGGTTGGCTCTCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFGPRHS*VGSPSP
Trigger: AGGTGAAGGAGAGCCAACGCATGAGTGACGAGGGCC...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp CCAGTGGAATGCTGTGGTCCCTTCTATGAGCTTCCAGAAATCCCTCACTTAAACAGAGGTTGTCATACATaGGCAGGGTCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PVECCGPFYELPEIPHLNRGCHT*AGSSPA
Trigger: AGCTGGAGAAGACCCTGCGCATGTATGACAACCTCT...GTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAAGGATTGGCCTTCCACTaGGGGCCACGAGGGCCCATT +
Preference number: 4 (lower is better)
Translates to: VIAGELKYTVTFESLLQEGLAFH*GPRGPI
Trigger: AATGGGCCCTCGTGGCCCCCAGTGGAAGGCCAATCC...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp GAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTAAGGGAGGAAACGAGCAGACTGCACTGCACTaGGGTTTGACCAACAAAACA +
Preference number: 4 (lower is better)
Translates to: EREALFSTPSEQSKGGNEQTALH*GLTNKT
Trigger: TGTTTTGTTGGTCAAACCCCAGTGCAGTGCAGTCTG...CTCGTTTCCTCCCTTACTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CAA 72 bp GAAAATTCCTCAGAAAGTCCCAAATCTGACCTAATGTaGACCAAGGGCCAGGGGGACCCATTCCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: ENSSESPKSDLM*TKGQGDPFQKF
Trigger: GAACTTCTGGAATGGGTCCCCCTGGCCCTTGGTCAACATTAGGTCAGATTTGGGACTTTCTGAGGAATTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAACTGATGCCACAGTGCTaGGCTGCAGGACGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: VIAGELKYTVTFESLLQELMPQC*AAGRCR
Trigger: ACGACAGCGTCCTGCAGCTCAGCACTGTGGCATCAG...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCCTTTTTGTAGATGGATaGTGTCAGGGAAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCLFVDG*CQGSWR
Trigger: TCTCCAACTTCCCTGACATCATCCATCTACAAAAAG...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp GAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTAAGGGAGGAAACGAGTCCTTTGGCCCTAAATaGGTTCATCAGTGTGACTCT +
Preference number: 4 (lower is better)
Translates to: EREALFSTPSEQSKGGNESFGPK*VHQCDS
Trigger: AGAGTCACACTGATGAACTCATTTAGGGCCAAAGGA...CTCGTTTCCTCCCTTACTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATTGGAGAAATCTGCCCTaGGAGGGGAAAAATTCGACA +
Preference number: 4 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDWRNLP*EGKNST
Trigger: TGTCGAATTTTTCCCCTCGCAGGGCAGATTTCTCCA...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTTAGGTTTCCCATTGTaGAACAGGAAGGATCTTGGG +
Preference number: 4 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHLGFPL*NRKDLG
Trigger: CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAA...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGCTCCCAGATTCTTTTaGCGGCTCTCGCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFAPRFF*RLSLWE
Trigger: CTCCCAAAGCGAGAGCCGCCAAAAGAATCTGGGAGC...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTCACAGAGCAGGCAAATaGGTGGGGATTGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFHRAGK*VGIGLP
Trigger: TGGAAGGCCAATCCCCACCCATTTGCCTGCTCTGTG...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAAAGCTCACGGCGCTGGTaGAAGTGGTTCATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VIAGELKYTVTFESLLQESSRRW*KWFISA
Trigger: GGCCGAGATGAACCACTTCCACCAGCGCCGTGAGCT...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTAGCATAGCCCTCCCCTaGACTTTTGAGGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFSIALP*TFEVLW
Trigger: CCACAGAACCTCAAAAGTTCAGGGGAGGGCTATGCT...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR GCA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGCATTCTTCAAAACACTaGCCAAATGTTGCCTACTCT +
Preference number: 4 (lower is better)
Translates to: PTTQARIPMESVPNLLGKHSSKH*PNVAYS
Trigger: AGAGTAGGCAACATTTGGGCAGTGTTTTGAAGAATG...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAACTGGGCTGGCCACACTaGGGCTGTTGTACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: VIAGELKYTVTFESLLQELGWPH*GCCTSS
Trigger: TGAGCTTGTACAACAGCCCCAGTGTGGCCAGCCCAG...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CCA 90 bp AAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATGCGCCTTTTTGTAGATaGATGATGTCAGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: KQAPVFFLLGFPLCNRKDAPFCR*MMSGKL
Trigger: CAACTTCCCTGACATCATCCATCTACAAAAAGGCGC...ATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTCTTCTAGCCACTCGCTaGGTGGTCTCTTTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFLLATR*VVSFVC
Trigger: GCAAACAAAAGAGACCACTCAGCGAGTGGCTAGAAG...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR TCA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAATCTGCATCATGTGCTTaGAGTCGAGCTCACGGCGCT +
Preference number: 4 (lower is better)
Translates to: VIAGELKYTVTFESLLQESASCA*SRAHGA
Trigger: AGCGCCGTGAGCTCGACTTCAAGCACATGATGCAGA...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CCA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTAATCGAGTCCAAGGGTaGATGTGTCCGGCTTCACAA +
Preference number: 4 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFNRVQG*MCPASQ
Trigger: TTGTGAAGCCGGACACATCCACCCTTGGACTCGATT...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
3UTR CAA 72 bp GAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTaGAGAGTCTTCTCCAGGAAGGTGTCACCAGGGATC +
Preference number: 4 (lower is better)
Translates to: ELLLVNSNIQSL*RVFSRKVSPGI
Trigger: GATCCCTGGTGACACCTTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR GCA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAATTAGGTTTCCCATTGTaGAACAGGAAGGATCTTGGG +
Preference number: 4 (lower is better)
Translates to: VIAGELKYTVTFESLLQELGFPL*NRKDLG
Trigger: CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAA...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR TCA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAACTTTTTGTAGATGGATaGTGTCAGGGAAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: VIAGELKYTVTFESLLQELFVDG*CQGSWR
Trigger: TCTCCAACTTCCCTGACATCATCCATCTACAAAAAG...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS GCA 90 bp TCTCGGCCTGCAGGGCGAAACCCACCACGCGGCAGCGCCTGCGAATaGCGTCTGCCTCGTCCTGCACCATGCGGCCCTCGTCACTCATGC +
Preference number: 5 (lower is better)
Translates to: SRPAGRNPPRGSACE*RLPRPAPCGPRHSC
Trigger: GCATGAGTGACGAGGGCCGCATGGTGCAGGACGAGGCAGACGGCATTCGCAGGCGCTGCCGCGTGGTGGGTTTCGCCCTGCAGGCCGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS GCA 90 bp GGTTCATCTCGGCCTGCAGGGCGAAACCCACCACGCGGCAGCGCCTaGGAATGCCGTCTGCCTCGTCCTGCACCATGCGGCCCTCGTCAC +
Preference number: 5 (lower is better)
Translates to: GSSRPAGRNPPRGSA*ECRLPRPAPCGPRH
Trigger: GTGACGAGGGCCGCATGGTGCAGGACGAGGCAGACGGCATTCGCAGGCGCTGCCGCGTGGTGGGTTTCGCCCTGCAGGCCGAGATGAACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS GCA 90 bp CTGCAGGGCGAAACCCACCACGCGGCAGCGCCTGCGAATGCCGTCTaGCTCGTCCTGCACCATGCGGCCCTCGTCACTCATGCGTTGGCT +
Preference number: 5 (lower is better)
Translates to: LQGETHHAAAPANAV*LVLHHAALVTHALA
Trigger: AGCCAACGCATGAGTGACGAGGGCCGCATGGTGCAGGACGAGGCAGACGGCATTCGCAGGCGCTGCCGCGTGGTGGGTTTCGCCCTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 90 bp CTCGCTTGGCAGATGCCAGGCTGTCCTGCCGCTCCAGTGGTGGCTTaGGCCGGAAGGCCATGTGCTGGCTGGGGTAGGCACCAGGGTAGG +
Preference number: 5 (lower is better)
Translates to: LAWQMPGCPAAPVVA*AGRPCAGWGRHQGR
Trigger: CCTACCCTGGTGCCTACCCCAGCCAGCACATGGCCTTCCGGCCCAAGCCACCACTGGAGCGGCAGGACAGCCTGGCATCTGCCAAGCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 90 bp ACTGCCTCGCTTGGCAGATGCCAGGCTGTCCTGCCGCTCCAGTGGTaGCTTGGGCCGGAAGGCCATGTGCTGGCTGGGGTAGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: TASLGRCQAVLPLQW*LGPEGHVLAGVGTR
Trigger: CCTGGTGCCTACCCCAGCCAGCACATGGCCTTCCGGCCCAAGCCACCACTGGAGCGGCAGGACAGCCTGGCATCTGCCAAGCGAGGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 90 bp CACACTGCCTCGCTTGGCAGATGCCAGGCTGTCCTGCCGCTCCAGTaGTGGCTTGGGCCGGAAGGCCATGTGCTGGCTGGGGTAGGCACC +
Preference number: 5 (lower is better)
Translates to: HTASLGRCQAVLPLQ*WLGPEGHVLAGVGT
Trigger: GGTGCCTACCCCAGCCAGCACATGGCCTTCCGGCCCAAGCCACCACTGGAGCGGCAGGACAGCCTGGCATCTGCCAAGCGAGGCAGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp AGGGATGGATCCACCCAGGGGTCCACAGCCGCCTCTAGCTCCTCCTGCCTGCTGCGCTCCAGTGGTGGCTaGGGCCGGAAGGCCATGTGC +
Preference number: 5 (lower is better)
Translates to: RDGSTQGSTAASSSSCLLRSSGG*GRKAMC
Trigger: GCACATGGCCTTCCGGCCCAAGCCACCACTGGAGCG...CAGCAGGCAGGAGGAGCTAGAGGCGGCTGTGGACCCCTGGGTGGATCCATCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp ACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGGGCAGGGAGCTGGGTTaGAGTCCAGCCCCGCCAGAG +
Preference number: 5 (lower is better)
Translates to: TEGRWAWNPSHGWASRPLGRELG*SPAPPE
Trigger: CTCTGGCGGGGCTGGACTCAAACCCAGCTCCCTGCC...CAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 90 bp TTACGGCCCACCACACTGCCTCGCTTGGCAGATGCCAGGCTGTCCTaGCGCTCCAGTGGTGGCTTGGGCCGGAAGGCCATGTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LRPTTLPRLADARLS*RSSGGLGRKAMCWL
Trigger: CAGCCAGCACATGGCCTTCCGGCCCAAGCCACCACTGGAGCGGCAGGACAGCCTGGCATCTGCCAAGCGAGGCAGTGTGGTGGGCCGTAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 90 bp CCACGCGGCAGCGCCTGCGAATGCCGTCTGCCTCGTCCTGCACCATaGGGCCCTCGTCACTCATGCGTTGGCTCTCCTTCACCTTGGCGA +
Preference number: 5 (lower is better)
Translates to: PRGSACECRLPRPAP*GPRHSCVGSPSPWR
Trigger: TCGCCAAGGTGAAGGAGAGCCAACGCATGAGTGACGAGGGCCGCATGGTGCAGGACGAGGCAGACGGCATTCGCAGGCGCTGCCGCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS GCA 90 bp GAAACGGTTGAGGTTACGGCCCACCACACTGCCTCGCTTGGCAGATaGCAGGCTGTCCTGCCGCTCCAGTGGTGGCTTGGGCCGGAAGGC +
Preference number: 5 (lower is better)
Translates to: ETVEVTAHHTASLGR*QAVLPLQWWLGPEG
Trigger: GCCTTCCGGCCCAAGCCACCACTGGAGCGGCAGGACAGCCTGGCATCTGCCAAGCGAGGCAGTGTGGTGGGCCGTAACCTCAACCGTTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 90 bp AAACCCACCACGCGGCAGCGCCTGCGAATGCCGTCTGCCTCGTCCTaGACCATGCGGCCCTCGTCACTCATGCGTTGGCTCTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: KPTTRQRLRMPSASS*TMRPSSLMRWLSFT
Trigger: GGTGAAGGAGAGCCAACGCATGAGTGACGAGGGCCGCATGGTGCAGGACGAGGCAGACGGCATTCGCAGGCGCTGCCGCGTGGTGGGTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp TCTCCCAGGAGGCAGGACAGGCCGCTTATCTCCCCCACCGCTGACCCCTCCCCCGGCTCCCAGATTCTTTaGGCGGCTCTCGCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: SPRRQDRPLISPTADPSPGSQIL*AALALG
Trigger: TCCCAAAGCGAGAGCCGCCAAAAGAATCTGGGAGCC...GGGGGAGGGGTCAGCGGTGGGGGAGATAAGCGGCCTGTCCTGCCTCCTGGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS TCA 90 bp ACCCTCGCGTGCACGCACACACTCAACAGTTTGGAGTTTGGAGAGTaGGCTCCGGCGAGCAGATGGCGCGGCCAGCCGTCTGTCCGTCCG +
Preference number: 5 (lower is better)
Translates to: TLACTHTLNSLEFGE*APASRWRGQPSVRP
Trigger: CGGACGGACAGACGGCTGGCCGCGCCATCTGCTCGCCGGAGCTCACTCTCCAAACTCCAAACTGTTGAGTGTGTGCGTGCACGCGAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 90 bp TTGAAGTCGAGCTCACGGCGCTGGTGGAAGTGGTTCATCTCGGCCTaGAGGGCGAAACCCACCACGCGGCAGCGCCTGCGAATGCCGTCT +
Preference number: 5 (lower is better)
Translates to: LKSSSRRWWKWFISA*RAKPTTRQRLRMPS
Trigger: AGACGGCATTCGCAGGCGCTGCCGCGTGGTGGGTTTCGCCCTGCAGGCCGAGATGAACCACTTCCACCAGCGCCGTGAGCTCGACTTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 90 bp GACCCCCGATCACCACCCTCGCGTGCACGCACACACTCAACAGTTTaGAGTTTGGAGAGTGAGCTCCGGCGAGCAGATGGCGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: DPRSPPSRARTHSTV*SLESELRRADGAAS
Trigger: GCTGGCCGCGCCATCTGCTCGCCGGAGCTCACTCTCCAAACTCCAAACTGTTGAGTGTGTGCGTGCACGCGAGGGTGGTGATCGGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp GGTGCAGGAATGTTCCTCCCGCCCAGGCCTAGGCCCTGCCCACCGCATCCTGGCAAGCATGAGAAACGGTaGAGGTTACGGCCCACCACA +
Preference number: 5 (lower is better)
Translates to: GAGMFLPPRPRPCPPHPGKHEKR*RLRPTT
Trigger: TGTGGTGGGCCGTAACCTCAACCGTTTCTCATGCTT...GCCAGGATGCGGTGGGCAGGGCCTAGGCCTGGGCGGGAGGAACATTCCTGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp ACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGCCTGAGATCCTGGGTTaGGACCTGCTTCGAGTGTGG +
Preference number: 5 (lower is better)
Translates to: TEGRWAWNPSHGWASRPLPEILG*DLLRVW
Trigger: CCACACTCGAAGCAGGTCCAAACCCAGGATCTCAGG...CAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGCACCAGGGCATGGCTCCTaGGGGAGAGGAGCCACCATC +
Preference number: 5 (lower is better)
Translates to: PSLRTPEEQACHSPGCPAPGHGS*GRGATI
Trigger: GATGGTGGCTCCTCTCCCCAAGGAGCCATGCCCTGG...TGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS TCA 90 bp GGATGTGTCCGGCTTCACAACGAGCCAGGCCGGGAAAACAAGGACTaGGGCTTACACAACAGGCCGCCAACTCTTCGACCCCGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: GCVRLHNEPGRENKD*GLHNRPPTLRPRLR
Trigger: GCGCAGCCGGGGTCGAAGAGTTGGCGGCCTGTTGTGTAAGCCTCAGTCCTTGTTTTCCCGGCCTGGCTCGTTGTGAAGCCGGACACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 90 bp GATCACCACCCTCGCGTGCACGCACACACTCAACAGTTTGGAGTTTaGAGAGTGAGCTCCGGCGAGCAGATGGCGCGGCCAGCCGTCTGT +
Preference number: 5 (lower is better)
Translates to: DHHPRVHAHTQQFGV*RVSSGEQMARPAVC
Trigger: ACAGACGGCTGGCCGCGCCATCTGCTCGCCGGAGCTCACTCTCCAAACTCCAAACTGTTGAGTGTGTGCGTGCACGCGAGGGTGGTGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 90 bp TTCTGCATCATGTGCTTGAAGTCGAGCTCACGGCGCTGGTGGAAGTaGTTCATCTCGGCCTGCAGGGCGAAACCCACCACGCGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: FCIMCLKSSSRRWWK*FISACRAKPTTRQR
Trigger: GCGCTGCCGCGTGGTGGGTTTCGCCCTGCAGGCCGAGATGAACCACTTCCACCAGCGCCGTGAGCTCGACTTCAAGCACATGATGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp GGCTCTGCTCCAGCCAGTGGTGCAGCCACGGCACAGTGGTTCATAGCCCTCCTGCAAAGCTACCCTGGTTaGAGAGGAAGCCACTGCCCC +
Preference number: 5 (lower is better)
Translates to: GSAPASGAATAQWFIALLQSYPG*RGSHCP
Trigger: GGGGCAGTGGCTTCCTCTCAAACCAGGGTAGCTTTG...CAGGAGGGCTATGAACCACTGTGCCGTGGCTGCACCACTGGCTGGAGCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCTTCTCCGCCCGGCGTTaGCCCATCTTCCACTGCTTG +
Preference number: 5 (lower is better)
Translates to: PAESGTSAWHVTRQESAIFSARR*PIFHCL
Trigger: CAAGCAGTGGAAGATGGGCAAACGCCGGGCGGAGAA...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp AGCCCTGGGTGCCCAGCATCCGACCCAAGGGTGCAGCAGGCCTCGGTGTCTGCTGCAACAGGAAGGATCTaGGGAAGACAGTGCCACAGA +
Preference number: 5 (lower is better)
Translates to: SPGCPASDPRVQQASVSAATGRI*GRQCHR
Trigger: TCTGTGGCACTGTCTTCCCAAGATCCTTCCTGTTGC...AGCAGACACCGAGGCCTGCTGCACCCTTGGGTCGGATGCTGGGCACCCAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCTGTGCAAGCATGGCTTaGTGGCGGTGTGTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: PAESGTSAWHVTRQESAICASMA*WRCVPE
Trigger: CTCGGGCACACACCGCCACAAAGCCATGCTTGCACA...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp GGTGCAGGAATGTTCCTCCCGCCCAGGCCTAGGCCCTGCCCACCGCATCCTGGCTTCACATTTCAGCCGTaGGGTTCACCAGCCTCCTAT +
Preference number: 5 (lower is better)
Translates to: GAGMFLPPRPRPCPPHPGFTFQP*GSPASY
Trigger: ATAGGAGGCTGGTGAACCCAACGGCTGAAATGTGAA...GCCAGGATGCGGTGGGCAGGGCCTAGGCCTGGGCGGGAGGAACATTCCTGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS TCA 90 bp CCGCCCGGCGTTTGCCCATCTTCCACTGCTTGTCATCCAGGCAGCTaGGGAAATGCTGGAAGCCTTCGTACTGGGAGAGCACAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: PPGVCPSSTACHPGS*GNAGSLRTGRAQGG
Trigger: GCCACCCTGTGCTCTCCCAGTACGAAGGCTTCCAGCATTTCCTCAGCTGCCTGGATGACAAGCAGTGGAAGATGGGCAAACGCCGGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGTTCTCCGCCCGGCGTTaGCCCATCTTCCACTGCTTG +
Preference number: 5 (lower is better)
Translates to: LESEEGRMLQWSPARDKLFSARR*PIFHCL
Trigger: CAAGCAGTGGAAGATGGGCAAACGCCGGGCGGAGAA...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCCTCGTCACTCATGCGTaGGCTCTCCTTCACCTTGGC +
Preference number: 5 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPLVTHA*ALLHLG
Trigger: GCCAAGGTGAAGGAGAGCCAACGCATGAGTGACGAG...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGTTCTGCATCATGTGCTaGAAGTCGAGCTCACGGCGC +
Preference number: 5 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRFCIMC*KSSSRR
Trigger: GCGCCGTGAGCTCGACTTCAAGCACATGATGCAGAA...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 90 bp AAACCCGGGCAGGGCTCGGCTGTCCCTCTGGCTCCCAGATTCTTTTaGCGGCTCTCGCTTTGGGAGGCTCTCACATTCCTCTGCAGATCT +
Preference number: 5 (lower is better)
Translates to: KPGQGSAVPLAPRFF*RLSLWEALTFLCRS
Trigger: AGATCTGCAGAGGAATGTGAGAGCCTCCCAAAGCGAGAGCCGCCAAAAGAATCTGGGAGCCAGAGGGACAGCCGAGCCCTGCCCGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 90 bp GGGTCCTCCACAGAGCAGGCAAATGGGTGGGGATTGGCCTTCCACTaGGGGCCACGAGGGCCCATTTCAATGGAGTATGTCTCAGCGATC +
Preference number: 5 (lower is better)
Translates to: GSSTEQANGWGLAFH*GPRGPISMEYVSAI
Trigger: GATCGCTGAGACATACTCCATTGAAATGGGCCCTCGTGGCCCCCAGTGGAAGGCCAATCCCCACCCATTTGCCTGCTCTGTGGAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp GCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTGGGAGGGGAGGGTGCCCGTaGGTGCCCAGCCCACCAGCC +
Preference number: 5 (lower is better)
Translates to: APVFFLLGFPLCNRKDLGRGGCP*VPSPPA
Trigger: GGCTGGTGGGCTGGGCACCAACGGGCACCCTCCCCT...CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCTGGCTCTCCTTCACCTaGGCGAAGGCGCCTTTTTGT +
Preference number: 5 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCWLSFT*AKAPFC
Trigger: ACAAAAAGGCGCCTTCGCCAAGGTGAAGGAGAGCCA...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp CAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTGGCAGGCCCTaGTCATTCTTCAAAACACTG +
Preference number: 5 (lower is better)
Translates to: QTEGRWAWNPSHGWASRPLSGRP*SFFKTL
Trigger: CAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAG...GGGCCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCTCCACCAAGTCCCCATaGCCTCCAAAGGAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPSTKSP*PPKESQ
Trigger: TTGGCTCTCCTTTGGAGGCAATGGGGACTTGGTGGA...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 90 bp CATGGCTGGGCTGGGTGGTATAGAAAGATGGGAAGGAGAGGGTCCTaGCCAGACCGGGGATGCTCACAAGGCAGTCCAAGAATGCACTCG +
Preference number: 5 (lower is better)
Translates to: HGWAGWYRKMGRRGS*PDRGCSQGSPRMHS
Trigger: CGAGTGCATTCTTGGACTGCCTTGTGAGCATCCCCGGTCTGGGCAGGACCCTCTCCTTCCCATCTTTCTATACCACCCAGCCCAGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 90 bp GAATGCCGTCTGCCTCGTCCTGCACCATGCGGCCCTCGTCACTCATaGGTTGGCTCTCCTTCACCTTGGCGAAGGCGCCTTTTTGTAGAT +
Preference number: 5 (lower is better)
Translates to: ECRLPRPAPCGPRHS*VGSPSPWRRRLFVD
Trigger: ATCTACAAAAAGGCGCCTTCGCCAAGGTGAAGGAGAGCCAACGCATGAGTGACGAGGGCCGCATGGTGCAGGACGAGGCAGACGGCATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 90 bp AAAGTCATAGAGGGCTCGGCCTTTCAGTGCCATGGCTGGGCTGGGTaGTATAGAAAGATGGGAAGGAGAGGGTCCTGCCCAGACCGGGGA +
Preference number: 5 (lower is better)
Translates to: KVIEGSAFQCHGWAG*YRKMGRRGSCPDRG
Trigger: TCCCCGGTCTGGGCAGGACCCTCTCCTTCCCATCTTTCTATACCACCCAGCCCAGCCATGGCACTGAAAGGCCGAGCCCTCTATGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 90 bp GGTGGGGATTGGCCTTCCACTGGGGGCCACGAGGGCCCATTTCAATaGAGTATGTCTCAGCGATCTTGGCCATCATGGGCACATCACCCA +
Preference number: 5 (lower is better)
Translates to: GGDWPSTGGHEGPFQ*SMSQRSWPSWAHHP
Trigger: TGGGTGATGTGCCCATGATGGCCAAGATCGCTGAGACATACTCCATTGAAATGGGCCCTCGTGGCCCCCAGTGGAAGGCCAATCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 90 bp CAGCTGAGGAAATGCTGGAAGCCTTCGTACTGGGAGAGCACAGGGTaGCTGGTCATGTGGTCCATCCAGAGGATGAGTCTCCGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: QLRKCWKPSYWESTG*LVMWSIQRMSLRFR
Trigger: GCGGAAGCGGAGACTCATCCTCTGGATGGACCACATGACCAGCCACCCTGTGCTCTCCCAGTACGAAGGCTTCCAGCATTTCCTCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCTCAACAGTTTGGAGTTaGGAGAGTGAGCTCCGGCGA +
Preference number: 5 (lower is better)
Translates to: PAESGTSAWHVTRQESAISTVWS*ESELRR
Trigger: TCGCCGGAGCTCACTCTCCAAACTCCAAACTGTTGA...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp AGGTTAAGGGCGGGAAGTTCCTCGGATGGGTTAGAAAATGGGGCAGGGTGGAGAACCACACTGCCTCGCTaGGCAGATGCCAGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: RLRAGSSSDGLENGAGWRTTLPR*ADARLS
Trigger: GGACAGCCTGGCATCTGCCAAGCGAGGCAGTGTGGT...TCTCCACCCTGCCCCATTTTCTAACCCATCCGAGGAACTTCCCGCCCTTAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp CTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCGAGATAAGCTGTGGCTCTCCTTCACCTaGGCGAAGGCGCCTTTTTGT +
Preference number: 5 (lower is better)
Translates to: LESEEGRMLQWSPARDKLWLSFT*AKAPFC
Trigger: ACAAAAAGGCGCCTTCGCCAAGGTGAAGGAGAGCCA...CAGCTTATCTCGGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp CCCCGACCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCATGCCTCCATAACTTaGCCCATGCTGTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PRPSLRTPEEQACHSPGCHASIT*PMLFLS
Trigger: GGAGAGGAACAGCATGGGCAAAGTTATGGAGGCATG...GCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGGTCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp GGGCTTATACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCGGTACCCAGGACGGTTaGGGGAAGAGACACAGCTTC +
Preference number: 5 (lower is better)
Translates to: GLIPQHLESEEGRMLQWSGTQDG*GKRHSF
Trigger: GAAGCTGTGTCTCTTCCCCAAACCGTCCTGGGTACC...GGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS TCA 90 bp AGGAGGGGGCGCGACGAGGCTGTCGGGCGACTTCTAGCCACTCGCTaGGTGGTCTCTTTTGTTTGCCTAATTCCTCAGCAGTTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: RRGRDEAVGRLLATR*VVSFVCLIPQQFLS
Trigger: GCTCAGAAACTGCTGAGGAATTAGGCAAACAAAAGAGACCACTCAGCGAGTGGCTAGAAGTCGCCCGACAGCCTCGTCGCGCCCCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS TCA 90 bp CACATCACCCAGGATGAAGGCCTCCACTCCAGAACGCACAAAGCATaGGAAACGGTTGAGGTTACGGCCCACCACACTGCCTCGCTTGGC +
Preference number: 5 (lower is better)
Translates to: HITQDEGLHSRTHKA*ETVEVTAHHTASLG
Trigger: GCCAAGCGAGGCAGTGTGGTGGGCCGTAACCTCAACCGTTTCTCATGCTTTGTGCGTTCTGGAGTGGAGGCCTTCATCCTGGGTGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 90 bp CAGGGAGGGCTCATGTCCACAGTCTCCTCCTCCCTTAGCAGCCTCTaGGGGGTTAGAGGGGAATCTCTCCTAACTCCTACTCCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: QGGLMSTVSSSLSSL*GVRGESLLTPTPRR
Trigger: TCTTCTGGGAGTAGGAGTTAGGAGAGATTCCCCTCTAACCCCCCAGAGGCTGCTAAGGGAGGAGGAGACTGTGGACATGAGCCCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp AAGCTCCCTGGTCCCTGGTCTAGCCAACCTTCCCTGACGGCCTTGACCCTGGAAGGTTCTGTGGAAAATTaGTGCCCACCACGACCTCAG +
Preference number: 5 (lower is better)
Translates to: KLPGPWSSQPSLTALTLEGSVEN*CPPRPQ
Trigger: CTGAGGTCGTGGTGGGCACAAATTTTCCACAGAACC...TTCCAGGGTCAAGGCCGTCAGGGAAGGTTGGCTAGACCAGGGACCAGGGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp AGGGATGGATCCACCCAGGGGTCCACAGCCGCCTCTAGCTCCTCCTGCCTGCTGCCCTCCCCTGAACTTTaGAGGTTCTGTGGAAAATTT +
Preference number: 5 (lower is better)
Translates to: RDGSTQGSTAASSSSCLLPSPEL*RFCGKF
Trigger: AAATTTTCCACAGAACCTCAAAAGTTCAGGGGAGGG...CAGCAGGCAGGAGGAGCTAGAGGCGGCTGTGGACCCCTGGGTGGATCCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp AAGCTCCCTGGTCCCTGGTCTAGCCAACCTTCCCTGACGGCCTTGACCCTGGAAGCAGAAAGAGAAGCCTaGTTTTCCACCCCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: KLPGPWSSQPSLTALTLEAEREA*FSTPSE
Trigger: CTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTCTGC...TTCCAGGGTCAAGGCCGTCAGGGAAGGTTGGCTAGACCAGGGACCAGGGAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 90 bp TGGTATAGAAAGATGGGAAGGAGAGGGTCCTGCCCAGACCGGGGATaGTCACAAGGCAGTCCAAGAATGCACTCGCAGCTGAATGGCGCT +
Preference number: 5 (lower is better)
Translates to: WYRKMGRRGSCPDRG*SQGSPRMHSQLNGA
Trigger: AGCGCCATTCAGCTGCGAGTGCATTCTTGGACTGCCTTGTGAGCATCCCCGGTCTGGGCAGGACCCTCTCCTTCCCATCTTTCTATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 90 bp CGTTTGCCCATCTTCCACTGCTTGTCATCCAGGCAGCTGAGGAAATaGTGGAAGCCTTCGTACTGGGAGAGCACAGGGTGGCTGGTCATG +
Preference number: 5 (lower is better)
Translates to: RLPIFHCLSSRQLRK*WKPSYWESTGWLVM
Trigger: CATGACCAGCCACCCTGTGCTCTCCCAGTACGAAGGCTTCCAGCATTTCCTCAGCTGCCTGGATGACAAGCAGTGGAAGATGGGCAAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 90 bp CTCACTGTGAAAGTCATAGAGGGCTCGGCCTTTCAGTGCCATGGCTaGGCTGGGTGGTATAGAAAGATGGGAAGGAGAGGGTCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: LTVKVIEGSAFQCHG*AGWYRKMGRRGSCP
Trigger: TGGGCAGGACCCTCTCCTTCCCATCTTTCTATACCACCCAGCCCAGCCATGGCACTGAAAGGCCGAGCCCTCTATGACTTTCACAGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 90 bp TGCTGGAAGCCTTCGTACTGGGAGAGCACAGGGTGGCTGGTCATGTaGTCCATCCAGAGGATGAGTCTCCGCTTCCGCTTTTCGATGAAG +
Preference number: 5 (lower is better)
Translates to: CWKPSYWESTGWLVM*SIQRMSLRFRFSMK
Trigger: CTTCATCGAAAAGCGGAAGCGGAGACTCATCCTCTGGATGGACCACATGACCAGCCACCCTGTGCTCTCCCAGTACGAAGGCTTCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 90 bp TGCTTGTCATCCAGGCAGCTGAGGAAATGCTGGAAGCCTTCGTACTaGGAGAGCACAGGGTGGCTGGTCATGTGGTCCATCCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: CLSSRQLRKCWKPSY*ESTGWLVMWSIQRM
Trigger: CATCCTCTGGATGGACCACATGACCAGCCACCCTGTGCTCTCCCAGTACGAAGGCTTCCAGCATTTCCTCAGCTGCCTGGATGACAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp GGAATCCCTCGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATCTTCCACTGCTaGTCATCCAGGCAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GIPRMAGQAGPCLFPLRFPIFHC*SSRQLR
Trigger: CCTCAGCTGCCTGGATGACAAGCAGTGGAAGATGGG...AAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCGAGGGATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGAGAAGAGGGAGATGTTaGCATGCCTCCATAACTTTG +
Preference number: 5 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRRRGRC*HASITL
Trigger: CAAAGTTATGGAGGCATGCAAACATCTCCCTCTTCT...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp AGGCAGACAGAGGGCAGGTGGGCATGGAATCCCTCGCATGGCTGGGCAAGCAGGCTCTTAGGTTTCCCATaGTGCAACAGGAAGGATCTT +
Preference number: 5 (lower is better)
Translates to: RQTEGRWAWNPSHGWASRLLGFP*CNRKDL
Trigger: AAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAG...CCTGCTTGCCCAGCCATGCGAGGGATTCCATGCCCACCTGCCCTCTGTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp GAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTAAGGGAGGAAACGAGCCTTCCCTGACGGCCTaGACCCTGGAAGCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: EREALFSTPSEQSKGGNEPSLTA*TLEALP
Trigger: AGGGAGGGCTTCCAGGGTCAAGGCCGTCAGGGAAGG...CTCGTTTCCTCCCTTACTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp CCAGCCGAGTCGGGAACATCTGCCTGGCATGTGACGAGGCAGGAATCGGCCATCATGCTTATGACACCTTaGCTCTGTGCAAGCATGGCT +
Preference number: 5 (lower is better)
Translates to: PAESGTSAWHVTRQESAIMLMTP*LCASMA
Trigger: AGCCATGCTTGCACAGAGCAAAGGTGTCATAAGCAT...GATGGCCGATTCCTGCCTCGTCACATGCCAGGCAGATGTTCCCGACTCGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS TCA 90 bp CAGACCGGGGATGCTCACAAGGCAGTCCAAGAATGCACTCGCAGCTaGATGGCGCTTACACAGTTCAATCTCTCAGGTCCTAAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: QTGDAHKAVQECTRS*MALTQFNLSGPKVG
Trigger: CCCCACCTTAGGACCTGAGAGATTGAACTGTGTAAGCGCCATTCAGCTGCGAGTGCATTCTTGGACTGCCTTGTGAGCATCCCCGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS TCA 90 bp GGTAGAAGAGGATCTGCTGGCGCAAGTAGTTCTGCATCATGTGCTTaGAGTCGAGCTCACGGCGCTGGTGGAAGTGGTTCATCTCGGCCT +
Preference number: 5 (lower is better)
Translates to: GRRGSAGASSSASCA*SRAHGAGGSGSSRP
Trigger: AGGCCGAGATGAACCACTTCCACCAGCGCCGTGAGCTCGACTTCAAGCACATGATGCAGAACTACTTGCGCCAGCAGATCCTCTTCTACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS GCA 90 bp TTCTTACTGAAGGCCTTGAAAGTGTCCACGCGATCTTCCACGTCCTaGAAGTCCTGGTGCTCGGTGGGGATCTGGAAGGTGAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: FLLKALKVSTRSSTS*KSWCSVGIWKVSRK
Trigger: CTTCCTGCTCACCTTCCAGATCCCCACCGAGCACCAGGACTTGCAGGACGTGGAAGATCGCGTGGACACTTTCAAGGCCTTCAGTAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 90 bp GCAGCTGAATGGCGCTTACACAGTTCAATCTCTCAGGTCCTAAGGTaGGGTCTCAGCACCCACAGATGCTGTCCAGTCTCCCCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: AAEWRLHSSISQVLR*GLSTHRCCPVSPSS
Trigger: TGAAGAGGGGGAGACTGGACAGCATCTGTGGGTGCTGAGACCCCACCTTAGGACCTGAGAGATTGAACTGTGTAAGCGCCATTCAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 90 bp CCGGGGATGCTCACAAGGCAGTCCAAGAATGCACTCGCAGCTGAATaGCGCTTACACAGTTCAATCTCTCAGGTCCTAAGGTGGGGTCTC +
Preference number: 5 (lower is better)
Translates to: PGMLTRQSKNALAAE*RLHSSISQVLRWGL
Trigger: GAGACCCCACCTTAGGACCTGAGAGATTGAACTGTGTAAGCGCCATTCAGCTGCGAGTGCATTCTTGGACTGCCTTGTGAGCATCCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp GAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTAAGGGAGGAAACGAGGCAAATGGGTGGGGATaGGCCTTCCACTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: EREALFSTPSEQSKGGNEANGWG*AFHWGP
Trigger: TGGCCCCCAGTGGAAGGCCAATCCCCACCCATTTGC...CTCGTTTCCTCCCTTACTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp GTAGCTGTCCAGGGCAGAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGCCCATCTTCCACTGCTaGTCATCCAGGCAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: VAVQGRKRSLVFHPLRAKPIFHC*SSRQLR
Trigger: CCTCAGCTGCCTGGATGACAAGCAGTGGAAGATGGG...CTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTCTGCCCTGGACAGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACGGCACCCATGACTCCTaGAAAGCTCCTTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: LRSWVWTCFECGELLLVNGTHDS*KAPSPR
Trigger: CCTGGGAGAAGGAGCTTTCAAGGAGTCATGGGTGCC...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp TACCTCAGCACCTTGAGTCCGAGGAGGGGAGGATGCTGCAATGGTCCCCTGCCCATCAGTCATACTGCATaGACTCTGTCTGTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: YLSTLSPRRGGCCNGPLPISHTA*TLSVSD
Trigger: GTCAGACACAGACAGAGTCAATGCAGTATGACTGAT...GGGCAGGGGACCATTGCAGCATCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp GGCTCTGCTCCAGCCAGTGGTGCAGCCACGGCACAGTGGTTCATAGCCCTCCTGGAGTGTGGGGAGTTATaGCTGGTGAACTCAAATATA +
Preference number: 5 (lower is better)
Translates to: GSAPASGAATAQWFIALLECGEL*LVNSNI
Trigger: TATATTTGAGTTCACCAGCAATAACTCCCCACACTC...CAGGAGGGCTATGAACCACTGTGCCGTGGCTGCACCACTGGCTGGAGCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp CCAGTGGAATGCTGTGGTCCCTTCTATGAGCTTCCAGAAATCCCTCACTTAAACTGGCTCTACTCCCCCTaGGAGACACCCCCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: PVECCGPFYELPEIPHLNWLYSP*ETPPPG
Trigger: CCCTGGAGGGGGTGTCTCCAAGGGGGAGTAGAGCCA...GTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 90 bp AGTTCAATCTCTCAGGTCCTAAGGTGGGGTCTCAGCACCCACAGATaGTGTCCAGTCTCCCCCTCTTCAAAGCAATGTCCATGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: SSISQVLRWGLSTHR*CPVSPSSKQCPWPR
Trigger: TCTGGGCCATGGACATTGCTTTGAAGAGGGGGAGACTGGACAGCATCTGTGGGTGCTGAGACCCCACCTTAGGACCTGAGAGATTGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 90 bp CTCCTTGTTCTCACTGTGAAAGTCATAGAGGGCTCGGCCTTTCAGTaGCATGGCTGGGCTGGGTGGTATAGAAAGATGGGAAGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: LLVLTVKVIEGSAFQ*HGWAGWYRKMGRRG
Trigger: CCCTCTCCTTCCCATCTTTCTATACCACCCAGCCCAGCCATGGCACTGAAAGGCCGAGCCCTCTATGACTTTCACAGTGAGAACAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCTTGGCGGCTCTCGCTTaGGGAGGCTCTCACATTCCT +
Preference number: 5 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCLAALA*GGSHIP
Trigger: AGGAATGTGAGAGCCTCCCAAAGCGAGAGCCGCCAA...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTTCTGCATCATGTGCTaGAAGTCGAGCTCACGGCGC +
Preference number: 5 (lower is better)
Translates to: LRSWVWTCFECGELLLVNFCIMC*KSSSRR
Trigger: GCGCCGTGAGCTCGACTTCAAGCACATGATGCAGAA...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGGGTCCTCACATGCTaGGGGAGGAGATGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHWVLTC*GRRWCR
Trigger: CCTGCACCATCTCCTCCCCAAGCATGTGAGGACCCA...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp GCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTGGGACACGCGGTCAGAGGTaGTCATACATGCGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: APVFFLLGFPLCNRKDLGTRGQR*SYMRRV
Trigger: GACCCTGCGCATGTATGACAACCTCTGACCGCGTGT...CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACGGCACCCATGACTCCTaGAAAGCTCCTTCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHGTHDS*KAPSPR
Trigger: CCTGGGAGAAGGAGCTTTCAAGGAGTCATGGGTGCC...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp CCTTCACTGAGGACTCCTGAAGAGCAGGCATGTCACAGCCCTGGGTGCCCAGCAGAGTGTGGGGAGTTATaGCTGGTGAACTCAAATATA +
Preference number: 5 (lower is better)
Translates to: PSLRTPEEQACHSPGCPAECGEL*LVNSNI
Trigger: TATATTTGAGTTCACCAGCAATAACTCCCCACACTC...TGCTGGGCACCCAGGGCTGTGACATGCCTGCTCTTCAGGAGTCCTCAGTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp AGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTCCTGAGATCCTGGGTTaGGACCTGCTTCGAGTGTGG +
Preference number: 5 (lower is better)
Translates to: SPSPPCTVWQALVILQNTPEILG*DLLRVW
Trigger: CCACACTCGAAGCAGGTCCAAACCCAGGATCTCAGG...AGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp GTAGCTGTCCAGGGCAGAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGGCAACAGGAAGGATCTaGGGAAGACAGTGCCACAGA +
Preference number: 5 (lower is better)
Translates to: VAVQGRKRSLVFHPLRAKATGRI*GRQCHR
Trigger: TCTGTGGCACTGTCTTCCCAAGATCCTTCCTGTTGC...CTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTCTGCCCTGGACAGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACAAATCTGACCTAATGTaGACCAAGGGCCAGGGGGAC +
Preference number: 5 (lower is better)
Translates to: LRSWVWTCFECGELLLVNKSDLM*TKGQGD
Trigger: GTCCCCCTGGCCCTTGGTCAACATTAGGTCAGATTT...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp GCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTGGGTTATACCTCAGCACCTaGAGTCCGAGGAGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: APVFFLLGFPLCNRKDLGLYLST*SPRRGG
Trigger: TCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAA...CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp GCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGCAACAGGAAGGATCTTGGGATGATGTCAGGGAAGTaGGAGAGCAGGCCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: APVFFLLGFPLCNRKDLGMMSGK*ESRPSS
Trigger: AGAGCTGGGCCTGCTCTCCAACTTCCCTGACATCAT...CCCAAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAGGAAAAAGACAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569152.1
CDS-3UTR CAA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGCAAATGGGTGGGGATaGGCCTTCCACTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFANGWG*AFHWGP
Trigger: TGGCCCCCAGTGGAAGGCCAATCCCCACCCATTTGC...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp GTAGCTGTCCAGGGCAGAAAGAGAAGCCTTGTTTTCCACCCCCTCAGAGCAAAGTTCTTACTGAAGGCCTaGAAAGTGTCCACGCGATCT +
Preference number: 5 (lower is better)
Translates to: VAVQGRKRSLVFHPLRAKFLLKA*KVSTRS
Trigger: AGATCGCGTGGACACTTTCAAGGCCTTCAGTAAGAA...CTTTGCTCTGAGGGGGTGGAAAACAAGGCTTCTCTTTCTGCCCTGGACAGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp CGCATGGCTGGGCAAGCAGGCCCCTGTCTTTTTCCTCTTAGGTTTCCCATTGTGAGTGGTCTCTTTTGTTaGCCTAATTCCTCAGCAGTT +
Preference number: 5 (lower is better)
Translates to: RMAGQAGPCLFPLRFPIVSGLFC*PNSSAV
Trigger: AACTGCTGAGGAATTAGGCAAACAAAAGAGACCACT...CACAATGGGAAACCTAAGAGGAAAAAGACAGGGGCCTGCTTGCCCAGCCATGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp CCTACCACACAGGCCAGAATCCCCATGGAAAGCGTACCTAACTTGCTTGGAAAGTTCTTACTGAAGGCCTaGAAAGTGTCCACGCGATCT +
Preference number: 5 (lower is better)
Translates to: PTTQARIPMESVPNLLGKFLLKA*KVSTRS
Trigger: AGATCGCGTGGACACTTTCAAGGCCTTCAGTAAGAA...CTTTCCAAGCAAGTTAGGTACGCTTTCCATGGGGATTCTGGCCTGTGTGGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp AAGTCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACCTGTCTGGCAGGCCCTaGTCATTCTTCAAAACACTG +
Preference number: 5 (lower is better)
Translates to: KSFSPMYCLAGPCHSSKHLSGRP*SFFKTL
Trigger: CAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAG...GTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp CTGAGATCCTGGGTTTGGACCTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACCTCTTAGGTTTCCCATaGTGCAACAGGAAGGATCTT +
Preference number: 5 (lower is better)
Translates to: LRSWVWTCFECGELLLVNLLGFP*CNRKDL
Trigger: AAGATCCTTCCTGTTGCACAATGGGAAACCTAAGAG...GTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGATCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTCTCGTCACTCATGCGTaGGCTCTCCTTCACCTTGGC +
Preference number: 5 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFLVTHA*ALLHLG
Trigger: GCCAAGGTGAAGGAGAGCCAACGCATGAGTGACGAG...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTCAGCTCAGCTCTAGCTaGAGAAGGGAGCTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFQLSSS*RRELPG
Trigger: TCCAGGCAGCTCCCTTCTCAAGCTAGAGCTGAGCTG...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAAGCCACACTGGGGCTGTaGTACAAGCTCACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: VIAGELKYTVTFESLLQEATLGL*YKLTWA
Trigger: AGCCCAGGTGAGCTTGTACAACAGCCCCAGTGTGGC...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp CCAGTGGAATGCTGTGGTCCCTTCTATGAGCTTCCAGAAATCCCTCACTTAAACAATAAGGAGCTGAACTaGGTGGTATCCAGTCATCCC +
Preference number: 5 (lower is better)
Translates to: PVECCGPFYELPEIPHLNNKELN*VVSSHP
Trigger: GGGATGACTGGATACCACCAAGTTCAGCTCCTTATT...GTTTAAGTGAGGGATTTCTGGAAGCTCATAGAAGGGACCACAGCATTCCACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAAACACGCGGTCAGAGGTaGTCATACATGCGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: VIAGELKYTVTFESLLQETRGQR*SYMRRV
Trigger: GACCCTGCGCATGTATGACAACCTCTGACCGCGTGT...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTCATGCCTCCATAACTTaGCCCATGCTGTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFHASIT*PMLFLS
Trigger: GGAGAGGAACAGCATGGGCAAAGTTATGGAGGCATG...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp TCCTTCTCCCCCATGTACTGTCTGGCAGGCCCTTGTCATTCTTCAAAACACTGCAATATACAGTCACTTTaGAGAGTCTTCTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SFSPMYCLAGPCHSSKHCNIQSL*RVFSRK
Trigger: CTTCCTGGAGAAGACTCTCAAAAGTGACTGTATATT...GCAGTGTTTTGAAGAATGACAAGGGCCTGCCAGACAGTACATGGGGGAGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGTAGCCACTGGTGCTTaGAATGGATGGCAAGGCATG +
Preference number: 5 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFVATGA*NGWQGM
Trigger: CATGCCTTGCCATCCATTCAAAGCACCAGTGGCTAC...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAATTATACCTCAGCACCTaGAGTCCGAGGAGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: VIAGELKYTVTFESLLQELYLST*SPRRGG
Trigger: TCCTCCCCTCCTCGGACTCAAGGTGCTGAGGTATAA...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAATGGAAGAGGTCATTCTaGGGCTGCTCAGCAAACATC +
Preference number: 5 (lower is better)
Translates to: VIAGELKYTVTFESLLQEWKRSF*GCSANI
Trigger: GATGTTTGCTGAGCAGCCCAAGAATGACCTCTTCCA...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAACCTCCCCTTCTTCCTTaGGCCCTAAATGAGTTCATC +
Preference number: 5 (lower is better)
Translates to: VIAGELKYTVTFESLLQEPPLLP*ALNEFI
Trigger: GATGAACTCATTTAGGGCCAAAGGAAGAAGGGGAGG...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS-3UTR CAA 90 bp GTTATTGCTGGTGAACTCAAATATACAGTCACTTTTGAGAGTCTTCTCCAGGAAAGAAGAGGGAGATGTTaGCATGCCTCCATAACTTTG +
Preference number: 5 (lower is better)
Translates to: VIAGELKYTVTFESLLQERRGRC*HASITL
Trigger: CAAAGTTATGGAGGCATGCAAACATCTCCCTCTTCT...TTCCTGGAGAAGACTCTCAAAAGTGACTGTATATTTGAGTTCACCAGCAATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS-3UTR CAA 90 bp CTGCTTCGAGTGTGGGGAGTTATTGCTGGTGAACTCAAATATACAGTCACTTTTCAAGTCTCAGTCTCTTaGTTGCGAAAGGGAATAAAT +
Preference number: 5 (lower is better)
Translates to: LLRVWGVIAGELKYTVTFQVSVS*LRKGIN
Trigger: ATTTATTCCCTTTCGCAACAAAGAGACTGAGACTTG...AAAAGTGACTGTATATTTGAGTTCACCAGCAATAACTCCCCACACTCGAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 72 bp CGGCCTGCAGGGCGAAACCCACCACGCGGCAGCGCCTaGGAATGCCGTCTGCCTCGTCCTGCACCATGCGGC +
Preference number: 6 (lower is better)
Translates to: RPAGRNPPRGSA*ECRLPRPAPCG
Trigger: GCCGCATGGTGCAGGACGAGGCAGACGGCATTCGCAGGCGCTGCCGCGTGGTGGGTTTCGCCCTGCAGGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS GCA 72 bp GCAGGGCGAAACCCACCACGCGGCAGCGCCTGCGAATaGCGTCTGCCTCGTCCTGCACCATGCGGCCCTCGT +
Preference number: 6 (lower is better)
Translates to: AGRNPPRGSACE*RLPRPAPCGPR
Trigger: ACGAGGGCCGCATGGTGCAGGACGAGGCAGACGGCATTCGCAGGCGCTGCCGCGTGGTGGGTTTCGCCCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS GCA 72 bp ACGCGGCAGCGCCTGCGAATGCCGTCTGCCTCGTCCTaGACCATGCGGCCCTCGTCACTCATGCGTTGGCTC +
Preference number: 6 (lower is better)
Translates to: TRQRLRMPSASS*TMRPSSLMRWL
Trigger: GAGCCAACGCATGAGTGACGAGGGCCGCATGGTGCAGGACGAGGCAGACGGCATTCGCAGGCGCTGCCGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS GCA 72 bp AGCTCACGGCGCTGGTGGAAGTGGTTCATCTCGGCCTaGAGGGCGAAACCCACCACGCGGCAGCGCCTGCGA +
Preference number: 6 (lower is better)
Translates to: SSRRWWKWFISA*RAKPTTRQRLR
Trigger: TCGCAGGCGCTGCCGCGTGGTGGGTTTCGCCCTGCAGGCCGAGATGAACCACTTCCACCAGCGCCGTGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 72 bp CAGATGCCAGGCTGTCCTGCCGCTCCAGTGGTGGCTTaGGCCGGAAGGCCATGTGCTGGCTGGGGTAGGCAC +
Preference number: 6 (lower is better)
Translates to: QMPGCPAAPVVA*AGRPCAGWGRH
Trigger: GTGCCTACCCCAGCCAGCACATGGCCTTCCGGCCCAAGCCACCACTGGAGCGGCAGGACAGCCTGGCATCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 72 bp TCGCTTGGCAGATGCCAGGCTGTCCTGCCGCTCCAGTaGTGGCTTGGGCCGGAAGGCCATGTGCTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: SLGRCQAVLPLQ*WLGPEGHVLAG
Trigger: CCCAGCCAGCACATGGCCTTCCGGCCCAAGCCACCACTGGAGCGGCAGGACAGCCTGGCATCTGCCAAGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 72 bp ACCACACTGCCTCGCTTGGCAGATGCCAGGCTGTCCTaGCGCTCCAGTGGTGGCTTGGGCCGGAAGGCCATG +
Preference number: 6 (lower is better)
Translates to: TTLPRLADARLS*RSSGGLGRKAM
Trigger: CATGGCCTTCCGGCCCAAGCCACCACTGGAGCGGCAGGACAGCCTGGCATCTGCCAAGCGAGGCAGTGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 72 bp GAGGTTACGGCCCACCACACTGCCTCGCTTGGCAGATaGCAGGCTGTCCTGCCGCTCCAGTGGTGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: EVTAHHTASLGR*QAVLPLQWWLG
Trigger: CCCAAGCCACCACTGGAGCGGCAGGACAGCCTGGCATCTGCCAAGCGAGGCAGTGTGGTGGGCCGTAACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 72 bp GAAACCCACCACGCGGCAGCGCCTGCGAATGCCGTCTaGCTCGTCCTGCACCATGCGGCCCTCGTCACTCAT +
Preference number: 6 (lower is better)
Translates to: ETHHAAAPANAV*LVLHHAALVTH
Trigger: ATGAGTGACGAGGGCCGCATGGTGCAGGACGAGGCAGACGGCATTCGCAGGCGCTGCCGCGTGGTGGGTTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 72 bp CTTGGCAGATGCCAGGCTGTCCTGCCGCTCCAGTGGTaGCTTGGGCCGGAAGGCCATGTGCTGGCTGGGGTA +
Preference number: 6 (lower is better)
Translates to: LGRCQAVLPLQW*LGPEGHVLAGV
Trigger: TACCCCAGCCAGCACATGGCCTTCCGGCCCAAGCCACCACTGGAGCGGCAGGACAGCCTGGCATCTGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CAA 72 bp CCACCACTCCTAGCTGGGCTGGCCACACTGGGGCTGTaGTACAAGCTCACCTGGGCTCCGGGAGAGCCTGCA +
Preference number: 6 (lower is better)
Translates to: PPLLAGLATLGL*YKLTWAPGEPA
Trigger: TGCAGGCTCTCCCGGAGCCCAGGTGAGCTTGTACAACAGCCCCAGTGTGGCCAGCCCAGCTAGGAGTGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CAA 72 bp GGGGAAGGAGGGGGCCCAGGCACACGCGGTCAGAGGTaGTCATACATGCGCAGGGTCTTCTCCAGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: GEGGGPGTRGQR*SYMRRVFSSCW
Trigger: CCAGCAGCTGGAGAAGACCCTGCGCATGTATGACAACCTCTGACCGCGTGTGCCTGGGCCCCCTCCTTCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS GCA 72 bp CTGCCTCGTCCTGCACCATGCGGCCCTCGTCACTCATaGGTTGGCTCTCCTTCACCTTGGCGAAGGCGCCTT +
Preference number: 6 (lower is better)
Translates to: LPRPAPCGPRHS*VGSPSPWRRRL
Trigger: AAGGCGCCTTCGCCAAGGTGAAGGAGAGCCAACGCATGAGTGACGAGGGCCGCATGGTGCAGGACGAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS GCA 72 bp AGCGCCTGCGAATGCCGTCTGCCTCGTCCTGCACCATaGGGCCCTCGTCACTCATGCGTTGGCTCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: SACECRLPRPAP*GPRHSCVGSPS
Trigger: TGAAGGAGAGCCAACGCATGAGTGACGAGGGCCGCATGGTGCAGGACGAGGCAGACGGCATTCGCAGGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CAA 90 bp CGATCACCACCCTCGCGTGCACGCACACACTCAACAGTTTGGAGTTaGGAGAGTGAGCTCCGGCGAGCAGATGGCGCGGCCAGCCGTCTG +
Preference number: 6 (lower is better)
Translates to: RSPPSRARTHSTVWS*ESELRRADGAASRL
Trigger: CAGACGGCTGGCCGCGCCATCTGCTCGCCGGAGCTCACTCTCCAAACTCCAAACTGTTGAGTGTGTGCGTGCACGCGAGGGTGGTGATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CAA 90 bp AAGCATGAGAAACGGTTGAGGTTACGGCCCACCACACTGCCTCGCTaGGCAGATGCCAGGCTGTCCTGCCGCTCCAGTGGTGGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: KHEKRLRLRPTTLPR*ADARLSCRSSGGLG
Trigger: GCCCAAGCCACCACTGGAGCGGCAGGACAGCCTGGCATCTGCCAAGCGAGGCAGTGTGGTGGGCCGTAACCTCAACCGTTTCTCATGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 72 bp CATTCCAGAAACCCGGGCAGGGCTCGGCTGTCCCTCTaGCTCCCAGATTCTTTTGGCGGCTCTCGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: HSRNPGRARLSL*LPDSFGGSRFG
Trigger: CCCAAAGCGAGAGCCGCCAAAAGAATCTGGGAGCCAGAGGGACAGCCGAGCCCTGCCCGGGTTTCTGGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CAA 72 bp AAACGGTTGAGGTTACGGCCCACCACACTGCCTCGCTaGGCAGATGCCAGGCTGTCCTGCCGCTCCAGTGGT +
Preference number: 6 (lower is better)
Translates to: KRLRLRPTTLPR*ADARLSCRSSG
Trigger: ACCACTGGAGCGGCAGGACAGCCTGGCATCTGCCAAGCGAGGCAGTGTGGTGGGCCGTAACCTCAACCGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CAA 90 bp GAAACCCGGGCAGGGCTCGGCTGTCCCTCTGGCTCCCAGATTCTTTaGGCGGCTCTCGCTTTGGGAGGCTCTCACATTCCTCTGCAGATC +
Preference number: 6 (lower is better)
Translates to: ETRAGLGCPSGSQIL*AALALGGSHIPLQI
Trigger: GATCTGCAGAGGAATGTGAGAGCCTCCCAAAGCGAGAGCCGCCAAAAGAATCTGGGAGCCAGAGGGACAGCCGAGCCCTGCCCGGGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS TCA 72 bp TGCACGCACACACTCAACAGTTTGGAGTTTGGAGAGTaGGCTCCGGCGAGCAGATGGCGCGGCCAGCCGTCT +
Preference number: 6 (lower is better)
Translates to: CTHTLNSLEFGE*APASRWRGQPS
Trigger: AGACGGCTGGCCGCGCCATCTGCTCGCCGGAGCTCACTCTCCAAACTCCAAACTGTTGAGTGTGTGCGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 72 bp GTGTCCACGCGATCTTCCACGTCCTGCAAGTCCTGGTaGTCGGTGGGGATCTGGAAGGTGAGCAGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: VSTRSSTSCKSW*SVGIWKVSRKL
Trigger: CAGCTTCCTGCTCACCTTCCAGATCCCCACCGAGCACCAGGACTTGCAGGACGTGGAAGATCGCGTGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 72 bp GAGAAAAGCAGCAGCCGCCTGAATCGAGTCCAAGGGTaGATGTGTCCGGCTTCACAACGAGCCAGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: EKSSSRLNRVQG*MCPASQRARPG
Trigger: TCCCGGCCTGGCTCGTTGTGAAGCCGGACACATCCACCCTTGGACTCGATTCAGGCGGCTGCTGCTTTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 72 bp CAGGGCTCGGCTGTCCCTCTGGCTCCCAGATTCTTTTaGCGGCTCTCGCTTTGGGAGGCTCTCACATTCCTC +
Preference number: 6 (lower is better)
Translates to: QGSAVPLAPRFF*RLSLWEALTFL
Trigger: GAGGAATGTGAGAGCCTCCCAAAGCGAGAGCCGCCAAAAGAATCTGGGAGCCAGAGGGACAGCCGAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 72 bp GAGGGCTCGGCCTTTCAGTGCCATGGCTGGGCTGGGTaGTATAGAAAGATGGGAAGGAGAGGGTCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: EGSAFQCHGWAG*YRKMGRRGSCP
Trigger: TGGGCAGGACCCTCTCCTTCCCATCTTTCTATACCACCCAGCCCAGCCATGGCACTGAAAGGCCGAGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 72 bp ATGTGCTTGAAGTCGAGCTCACGGCGCTGGTGGAAGTaGTTCATCTCGGCCTGCAGGGCGAAACCCACCACG +
Preference number: 6 (lower is better)
Translates to: MCLKSSSRRWWK*FISACRAKPTT
Trigger: CGTGGTGGGTTTCGCCCTGCAGGCCGAGATGAACCACTTCCACCAGCGCCGTGAGCTCGACTTCAAGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CAA 72 bp GCAGGGCTCGGCTGTCCCTCTGGCTCCCAGATTCTTTaGGCGGCTCTCGCTTTGGGAGGCTCTCACATTCCT +
Preference number: 6 (lower is better)
Translates to: AGLGCPSGSQIL*AALALGGSHIP
Trigger: AGGAATGTGAGAGCCTCCCAAAGCGAGAGCCGCCAAAAGAATCTGGGAGCCAGAGGGACAGCCGAGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CAA 72 bp CTCGTCCTGCACCATGCGGCCCTCGTCACTCATGCGTaGGCTCTCCTTCACCTTGGCGAAGGCGCCTTTTTG +
Preference number: 6 (lower is better)
Translates to: LVLHHAALVTHA*ALLHLGEGAFL
Trigger: CAAAAAGGCGCCTTCGCCAAGGTGAAGGAGAGCCAACGCATGAGTGACGAGGGCCGCATGGTGCAGGACGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS TCA 72 bp CCTCAGCAGTTTCTGAGCCTGACGCTGACCCTGCTCTaGATCCCAGGAACCCCGTCCAAAGGTAACCCCAGC +
Preference number: 6 (lower is better)
Translates to: PQQFLSLTLTLL*IPGTPSKGNPS
Trigger: GCTGGGGTTACCTTTGGACGGGGTTCCTGGGATTCAGAGCAGGGTCAGCGTCAGGCTCAGAAACTGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS TCA 72 bp CGGCTTCACAACGAGCCAGGCCGGGAAAACAAGGACTaGGGCTTACACAACAGGCCGCCAACTCTTCGACCC +
Preference number: 6 (lower is better)
Translates to: RLHNEPGRENKD*GLHNRPPTLRP
Trigger: GGGTCGAAGAGTTGGCGGCCTGTTGTGTAAGCCTCAGTCCTTGTTTTCCCGGCCTGGCTCGTTGTGAAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 72 bp ACCCGGGACTTACGACCCCCGATCACCACCCTCGCGTaGACGCACACACTCAACAGTTTGGAGTTTGGAGAG +
Preference number: 6 (lower is better)
Translates to: TRDLRPPITTLA*THTLNSLEFGE
Trigger: CTCTCCAAACTCCAAACTGTTGAGTGTGTGCGTGCACGCGAGGGTGGTGATCGGGGGTCGTAAGTCCCGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 72 bp AAGATGGGAAGGAGAGGGTCCTGCCCAGACCGGGGATaGTCACAAGGCAGTCCAAGAATGCACTCGCAGCTG +
Preference number: 6 (lower is better)
Translates to: KMGRRGSCPDRG*SQGSPRMHSQL
Trigger: CAGCTGCGAGTGCATTCTTGGACTGCCTTGTGAGCATCCCCGGTCTGGGCAGGACCCTCTCCTTCCCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 72 bp TCACCACCCTCGCGTGCACGCACACACTCAACAGTTTaGAGTTTGGAGAGTGAGCTCCGGCGAGCAGATGGC +
Preference number: 6 (lower is better)
Translates to: SPPSRARTHSTV*SLESELRRADG
Trigger: GCCATCTGCTCGCCGGAGCTCACTCTCCAAACTCCAAACTGTTGAGTGTGTGCGTGCACGCGAGGGTGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 72 bp TCGTCCTGCACCATGCGGCCCTCGTCACTCATGCGTTaGCTCTCCTTCACCTTGGCGAAGGCGCCTTTTTGT +
Preference number: 6 (lower is better)
Translates to: SSCTMRPSSLMR*LSFTLAKAPFC
Trigger: ACAAAAAGGCGCCTTCGCCAAGGTGAAGGAGAGCCAACGCATGAGTGACGAGGGCCGCATGGTGCAGGACGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 72 bp TGCATCATGTGCTTGAAGTCGAGCTCACGGCGCTGGTaGAAGTGGTTCATCTCGGCCTGCAGGGCGAAACCC +
Preference number: 6 (lower is better)
Translates to: CIMCLKSSSRRW*KWFISACRAKP
Trigger: GGGTTTCGCCCTGCAGGCCGAGATGAACCACTTCCACCAGCGCCGTGAGCTCGACTTCAAGCACATGATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CAA 72 bp CCCTCTGGCTCCCAGATTCTTTTGGCGGCTCTCGCTTaGGGAGGCTCTCACATTCCTCTGCAGATCTGCCCC +
Preference number: 6 (lower is better)
Translates to: PSGSQILLAALA*GGSHIPLQICP
Trigger: GGGGCAGATCTGCAGAGGAATGTGAGAGCCTCCCAAAGCGAGAGCCGCCAAAAGAATCTGGGAGCCAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CAA 90 bp AGGATGAAGGCCTCCACTCCAGAACGCACAAAGCATGAGAAACGGTaGAGGTTACGGCCCACCACACTGCCTCGCTTGGCAGATGCCAGG +
Preference number: 6 (lower is better)
Translates to: RMKASTPERTKHEKR*RLRPTTLPRLADAR
Trigger: CCTGGCATCTGCCAAGCGAGGCAGTGTGGTGGGCCGTAACCTCAACCGTTTCTCATGCTTTGTGCGTTCTGGAGTGGAGGCCTTCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CAA 90 bp TGGGGGCCACGAGGGCCCATTTCAATGGAGTATGTCTCAGCGATCTaGGCCATCATGGGCACATCACCCAGGATGAAGGCCTCCACTCCA +
Preference number: 6 (lower is better)
Translates to: WGPRGPISMEYVSAI*AIMGTSPRMKASTP
Trigger: TGGAGTGGAGGCCTTCATCCTGGGTGATGTGCCCATGATGGCCAAGATCGCTGAGACATACTCCATTGAAATGGGCCCTCGTGGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS TCA 72 bp CCTCCACTCCAGAACGCACAAAGCATGAGAAACGGTTaGGGTTACGGCCCACCACACTGCCTCGCTTGGCAG +
Preference number: 6 (lower is better)
Translates to: PPLQNAQSMRNG*GYGPPHCLAWQ
Trigger: CTGCCAAGCGAGGCAGTGTGGTGGGCCGTAACCTCAACCGTTTCTCATGCTTTGTGCGTTCTGGAGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 72 bp TGGCCTTCCACTGGGGGCCACGAGGGCCCATTTCAATaGAGTATGTCTCAGCGATCTTGGCCATCATGGGCA +
Preference number: 6 (lower is better)
Translates to: WPSTGGHEGPFQ*SMSQRSWPSWA
Trigger: TGCCCATGATGGCCAAGATCGCTGAGACATACTCCATTGAAATGGGCCCTCGTGGCCCCCAGTGGAAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 72 bp CCTTCGTACTGGGAGAGCACAGGGTGGCTGGTCATGTaGTCCATCCAGAGGATGAGTCTCCGCTTCCGCTTT +
Preference number: 6 (lower is better)
Translates to: PSYWESTGWLVM*SIQRMSLRFRF
Trigger: AAAGCGGAAGCGGAGACTCATCCTCTGGATGGACCACATGACCAGCCACCCTGTGCTCTCCCAGTACGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 72 bp TCCAGGCAGCTGAGGAAATGCTGGAAGCCTTCGTACTaGGAGAGCACAGGGTGGCTGGTCATGTGGTCCATC +
Preference number: 6 (lower is better)
Translates to: SRQLRKCWKPSY*ESTGWLVMWSI
Trigger: GATGGACCACATGACCAGCCACCCTGTGCTCTCCCAGTACGAAGGCTTCCAGCATTTCCTCAGCTGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 72 bp AAAGTGTCCACGCGATCTTCCACGTCCTGCAAGTCCTaGTGCTCGGTGGGGATCTGGAAGGTGAGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: KVSTRSSTSCKS*CSVGIWKVSRK
Trigger: CTTCCTGCTCACCTTCCAGATCCCCACCGAGCACCAGGACTTGCAGGACGTGGAAGATCGCGTGGACACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CAA 72 bp GCCTCCACTCCAGAACGCACAAAGCATGAGAAACGGTaGAGGTTACGGCCCACCACACTGCCTCGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: ASTPERTKHEKR*RLRPTTLPRLA
Trigger: TGCCAAGCGAGGCAGTGTGGTGGGCCGTAACCTCAACCGTTTCTCATGCTTTGTGCGTTCTGGAGTGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CAA 90 bp ACCATCTCATCCTTCTCCGCCCGGCGTTTGCCCATCTTCCACTGCTaGTCATCCAGGCAGCTGAGGAAATGCTGGAAGCCTTCGTACTGG +
Preference number: 6 (lower is better)
Translates to: TISSFSARRLPIFHC*SSRQLRKCWKPSYW
Trigger: CCAGTACGAAGGCTTCCAGCATTTCCTCAGCTGCCTGGATGACAAGCAGTGGAAGATGGGCAAACGCCGGGCGGAGAAGGATGAGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS TCA 72 bp CGCGACGAGGCTGTCGGGCGACTTCTAGCCACTCGCTaGGTGGTCTCTTTTGTTTGCCTAATTCCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: RDEAVGRLLATR*VVSFVCLIPQQ
Trigger: CTGCTGAGGAATTAGGCAAACAAAAGAGACCACTCAGCGAGTGGCTAGAAGTCGCCCGACAGCCTCGTCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS TCA 72 bp CAGGATGAAGGCCTCCACTCCAGAACGCACAAAGCATaGGAAACGGTTGAGGTTACGGCCCACCACACTGCC +
Preference number: 6 (lower is better)
Translates to: QDEGLHSRTHKA*ETVEVTAHHTA
Trigger: GGCAGTGTGGTGGGCCGTAACCTCAACCGTTTCTCATGCTTTGTGCGTTCTGGAGTGGAGGCCTTCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 72 bp TTCTGCATCATGTGCTTGAAGTCGAGCTCACGGCGCTaGTGGAAGTGGTTCATCTCGGCCTGCAGGGCGAAA +
Preference number: 6 (lower is better)
Translates to: FCIMCLKSSSRR*WKWFISACRAK
Trigger: TTTCGCCCTGCAGGCCGAGATGAACCACTTCCACCAGCGCCGTGAGCTCGACTTCAAGCACATGATGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS TCA 72 bp CAGCGATCTTGGCCATCATGGGCACATCACCCAGGATaGAGGCCTCCACTCCAGAACGCACAAAGCATGAGA +
Preference number: 6 (lower is better)
Translates to: QRSWPSWAHHPG*RPPLQNAQSMR
Trigger: TCTCATGCTTTGTGCGTTCTGGAGTGGAGGCCTTCATCCTGGGTGATGTGCCCATGATGGCCAAGATCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS TCA 72 bp GGATCTGCTGGCGCAAGTAGTTCTGCATCATGTGCTTaGAGTCGAGCTCACGGCGCTGGTGGAAGTGGTTCA +
Preference number: 6 (lower is better)
Translates to: GSAGASSSASCA*SRAHGAGGSGS
Trigger: TGAACCACTTCCACCAGCGCCGTGAGCTCGACTTCAAGCACATGATGCAGAACTACTTGCGCCAGCAGATCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS GCA 72 bp TCTCAGGTCCTAAGGTGGGGTCTCAGCACCCACAGATaGTGTCCAGTCTCCCCCTCTTCAAAGCAATGTCCA +
Preference number: 6 (lower is better)
Translates to: SQVLRWGLSTHR*CPVSPSSKQCP
Trigger: TGGACATTGCTTTGAAGAGGGGGAGACTGGACAGCATCTGTGGGTGCTGAGACCCCACCTTAGGACCTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS GCA 72 bp ATCTTCCACTGCTTGTCATCCAGGCAGCTGAGGAAATaGTGGAAGCCTTCGTACTGGGAGAGCACAGGGTGG +
Preference number: 6 (lower is better)
Translates to: IFHCLSSRQLRK*WKPSYWESTGW
Trigger: CCACCCTGTGCTCTCCCAGTACGAAGGCTTCCAGCATTTCCTCAGCTGCCTGGATGACAAGCAGTGGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 72 bp CTCATGTCCACAGTCTCCTCCTCCCTTAGCAGCCTCTaGGGGGTTAGAGGGGAATCTCTCCTAACTCCTACT +
Preference number: 6 (lower is better)
Translates to: LMSTVSSSLSSL*GVRGESLLTPT
Trigger: AGTAGGAGTTAGGAGAGATTCCCCTCTAACCCCCCAGAGGCTGCTAAGGGAGGAGGAGACTGTGGACATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 72 bp TGCTGTCCAGTCTCCCCCTCTTCAAAGCAATGTCCATaGCCCAGAAACTGCCCTATCAGGTCTCCGGGCATA +
Preference number: 6 (lower is better)
Translates to: CCPVSPSSKQCP*PRNCPIRSPGI
Trigger: TATGCCCGGAGACCTGATAGGGCAGTTTCTGGGCCATGGACATTGCTTTGAAGAGGGGGAGACTGGACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 72 bp TGGCGCTTACACAGTTCAATCTCTCAGGTCCTAAGGTaGGGTCTCAGCACCCACAGATGCTGTCCAGTCTCC +
Preference number: 6 (lower is better)
Translates to: WRLHSSISQVLR*GLSTHRCCPVS
Trigger: GGAGACTGGACAGCATCTGTGGGTGCTGAGACCCCACCTTAGGACCTGAGAGATTGAACTGTGTAAGCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 72 bp AAATGCTGGAAGCCTTCGTACTGGGAGAGCACAGGGTaGCTGGTCATGTGGTCCATCCAGAGGATGAGTCTC +
Preference number: 6 (lower is better)
Translates to: KCWKPSYWESTG*LVMWSIQRMSL
Trigger: GAGACTCATCCTCTGGATGGACCACATGACCAGCCACCCTGTGCTCTCCCAGTACGAAGGCTTCCAGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS CCA 72 bp GGTCATTCTTGGGCTGCTCAGCAAACATCTCCCCGATaGCTTCATAGGTACGGCCCGTGTGAGAAATGGCAC +
Preference number: 6 (lower is better)
Translates to: GHSWAAQQTSPR*LHRYGPCEKWH
Trigger: GTGCCATTTCTCACACGGGCCGTACCTATGAAGCCATCGGGGAGATGTTTGCTGAGCAGCCCAAGAATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CAA 72 bp CGAGGGCCCATTTCAATGGAGTATGTCTCAGCGATCTaGGCCATCATGGGCACATCACCCAGGATGAAGGCC +
Preference number: 6 (lower is better)
Translates to: RGPISMEYVSAI*AIMGTSPRMKA
Trigger: GGCCTTCATCCTGGGTGATGTGCCCATGATGGCCAAGATCGCTGAGACATACTCCATTGAAATGGGCCCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CAA 72 bp CGGCCCTCGTCACTCATGCGTTGGCTCTCCTTCACCTaGGCGAAGGCGCCTTTTTGTAGATGGATGATGTCA +
Preference number: 6 (lower is better)
Translates to: RPSSLMRWLSFT*AKAPFCRWMMS
Trigger: TGACATCATCCATCTACAAAAAGGCGCCTTCGCCAAGGTGAAGGAGAGCCAACGCATGAGTGACGAGGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS TCA 72 bp GTTTGCCCATCTTCCACTGCTTGTCATCCAGGCAGCTaGGGAAATGCTGGAAGCCTTCGTACTGGGAGAGCA +
Preference number: 6 (lower is better)
Translates to: VCPSSTACHPGS*GNAGSLRTGRA
Trigger: TGCTCTCCCAGTACGAAGGCTTCCAGCATTTCCTCAGCTGCCTGGATGACAAGCAGTGGAAGATGGGCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308527.6
ENST00000569152.1
CDS GCA 72 bp CTCACTGTGAAAGTCATAGAGGGCTCGGCCTTTCAGTaGCATGGCTGGGCTGGGTGGTATAGAAAGATGGGA +
Preference number: 6 (lower is better)
Translates to: LTVKVIEGSAFQ*HGWAGWYRKMG
Trigger: TCCCATCTTTCTATACCACCCAGCCCAGCCATGGCACTGAAAGGCCGAGCCCTCTATGACTTTCACAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CAA 72 bp AAGGCGCCTTTTTGTAGATGGATGATGTCAGGGAAGTaGGAGAGCAGGCCCAGCTCTGATGCCACAGTGCTG +
Preference number: 6 (lower is better)
Translates to: KAPFCRWMMSGK*ESRPSSDATVL
Trigger: CAGCACTGTGGCATCAGAGCTGGGCCTGCTCTCCAACTTCCCTGACATCATCCATCTACAAAAAGGCGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569152.1
CDS TCA 72 bp GATGCTCACAAGGCAGTCCAAGAATGCACTCGCAGCTaGATGGCGCTTACACAGTTCAATCTCTCAGGTCCT +
Preference number: 6 (lower is better)
Translates to: DAHKAVQECTRS*MALTQFNLSGP
Trigger: AGGACCTGAGAGATTGAACTGTGTAAGCGCCATTCAGCTGCGAGTGCATTCTTGGACTGCCTTGTGAGCATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6
CDS CCA 72 bp CTCACAAGGCAGTCCAAGAATGCACTCGCAGCTGAATaGCGCTTACACAGTTCAATCTCTCAGGTCCTAAGG +
Preference number: 6 (lower is better)
Translates to: LTRQSKNALAAE*RLHSSISQVLR
Trigger: CCTTAGGACCTGAGAGATTGAACTGTGTAAGCGCCATTCAGCTGCGAGTGCATTCTTGGACTGCCTTGTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308527.6