RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNX30 (Homo sapiens)

Ensembl gene IDs: ENSG00000148158

Ensembl transcript IDs: ENST00000374232.8, ENST00000416585.1, ENST00000604751.1

Found 498 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGACTCCTCTCTTCTGTCTTCCTCTGGATTTTTAACCCGGGCGAATaGAATCTCCCACTTTCCAGGCCTGGGGCGGCTGCTAGGGAGGGC +
Preference number: 1 (lower is better)
Translates to: GLLSSVFLWIFNPGE*NLPLSRPGAAAREG
Trigger: GCCCTCCCTAGCAGCCGCCCCAGGCCTGGAAAGTGGGAGATTTCATTCGCCCGGGTTAAAAATCCAGAGGAAGACAGAAGAGAGGAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 90 bp GTCCTGACCACAGGCAGCCCATCTTCTGAGAAGAATCACCCTCAGTaGAGCCAGCAACCCATCTGGCCAGACTGGAACCCAGTTCTAACC +
Preference number: 1 (lower is better)
Translates to: VLTTGSPSSEKNHPQ*SQQPIWPDWNPVLT
Trigger: GGTTAGAACTGGGTTCCAGTCTGGCCAGATGGGTTGCTGGCTGCACTGAGGGTGATTCTTCTCAGAAGATGGGCTGCCTGTGGTCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 90 bp GAGAAGAATCACCCTCAGTGCAGCCAGCAACCCATCTGGCCAGACTaGAACCCAGTTCTAACCCACCCCAAGACCCAAGGAGAAGAGGCT +
Preference number: 1 (lower is better)
Translates to: EKNHPQCSQQPIWPD*NPVLTHPKTQGEEA
Trigger: AGCCTCTTCTCCTTGGGTCTTGGGGTGGGTTAGAACTGGGTTCCAGTCTGGCCAGATGGGTTGCTGGCTGCACTGAGGGTGATTCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp CTGGAACCCAGTTCTAACCCACCCCAAGACCCAAGGAGAAGAGGCTaGCATAGGCCTTGGAGGTTGCTCTTGACTTCCCTCTTCCTCCTC +
Preference number: 1 (lower is better)
Translates to: LEPSSNPPQDPRRRG*HRPWRLLLTSLFLL
Trigger: GAGGAGGAAGAGGGAAGTCAAGAGCAACCTCCAAGGCCTATGTCAGCCTCTTCTCCTTGGGTCTTGGGGTGGGTTAGAACTGGGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp AGTAGGTGTCTGGGAAGGTGGAGTCCAGACTGGTATGCCCTGTCCTaGCCACAGGCAGCCCATCTTCTGAGAAGAATCACCCTCAGTGCA +
Preference number: 1 (lower is better)
Translates to: SRCLGRWSPDWYALS*PQAAHLLRRITLSA
Trigger: TGCACTGAGGGTGATTCTTCTCAGAAGATGGGCTGCCTGTGGTCAGGACAGGGCATACCAGTCTGGACTCCACCTTCCCAGACACCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 90 bp CAGCTACAGGTACTGTACGTTAAGGACTTGCCAGGGAGGCACCAATaGCTCCTAGGCCAAGACGAGTCAATGCCCACAGAGGCCAATTCC +
Preference number: 1 (lower is better)
Translates to: QLQVLYVKDLPGRHQ*LLGQDESMPTEANS
Trigger: GGAATTGGCCTCTGTGGGCATTGACTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAGTACCTGTAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 90 bp CCATCTTCTGAGAAGAATCACCCTCAGTGCAGCCAGCAACCCATCTaGCCAGACTGGAACCCAGTTCTAACCCACCCCAAGACCCAAGGA +
Preference number: 1 (lower is better)
Translates to: PSSEKNHPQCSQQPI*PDWNPVLTHPKTQG
Trigger: TCCTTGGGTCTTGGGGTGGGTTAGAACTGGGTTCCAGTCTGGCCAGATGGGTTGCTGGCTGCACTGAGGGTGATTCTTCTCAGAAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp CAAATATCAGCAGAGGGCTGTCAGCTCGCCATTAGACACACATCCTaGTTCTCCCAGCACAGTGTCAGGTCAGACCCAGGCGTCCATACC +
Preference number: 1 (lower is better)
Translates to: QISAEGCQLAIRHTS*FSQHSVRSDPGVHT
Trigger: GGTATGGACGCCTGGGTCTGACCTGACACTGTGCTGGGAGAATCAGGATGTGTGTCTAATGGCGAGCTGACAGCCCTCTGCTGATATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 90 bp GGTCTAAGACTGCGAACAATCAATCCTGTCCAACAGGGGTGTTGCTaGGTGTCACCTACTAGGACCAGCCTACAGAGAGCCCAGAACCAC +
Preference number: 1 (lower is better)
Translates to: GLRLRTINPVQQGCC*VSPTRTSLQRAQNH
Trigger: GTGGTTCTGGGCTCTCTGTAGGCTGGTCCTAGTAGGTGACACCCAGCAACACCCCTGTTGGACAGGATTGATTGTTCGCAGTCTTAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 90 bp GTTCCCAAAGATGAGCATTTGCTGCTGGGCTGGTCTGGTGCCTTCTaGCAAATATCAGCAGAGGGCTGTCAGCTCGCCATTAGACACACA +
Preference number: 1 (lower is better)
Translates to: VPKDEHLLLGWSGAF*QISAEGCQLAIRHT
Trigger: TGTGTGTCTAATGGCGAGCTGACAGCCCTCTGCTGATATTTGGCAGAAGGCACCAGACCAGCCCAGCAGCAAATGCTCATCTTTGGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 90 bp GATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTaGCATCCCAAAATTCCACTTGCAGACTGCCACATGGTCATCGTG +
Preference number: 1 (lower is better)
Translates to: DGRTKSHSNSGCSSG*HPKIPLADCHMVIV
Trigger: CACGATGACCATGTGGCAGTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 90 bp GTTGGTCTAAGACTGCGAACAATCAATCCTGTCCAACAGGGGTGTTaGTGGGTGTCACCTACTAGGACCAGCCTACAGAGAGCCCAGAAC +
Preference number: 1 (lower is better)
Translates to: VGLRLRTINPVQQGC*WVSPTRTSLQRAQN
Trigger: GTTCTGGGCTCTCTGTAGGCTGGTCCTAGTAGGTGACACCCAGCAACACCCCTGTTGGACAGGATTGATTGTTCGCAGTCTTAGACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp TCCTATGCTGTCCAACTGCGGCATCAACAGCACCACAGCCTTGGCTaGTGCGAGGATGACCTGCAGTTAAAAGTGGGCTTAAGTGACCTT +
Preference number: 1 (lower is better)
Translates to: SYAVQLRHQQHHSLG*CEDDLQLKVGLSDL
Trigger: AAGGTCACTTAAGCCCACTTTTAACTGCAGGTCATCCTCGCATCAGCCAAGGCTGTGGTGCTGTTGATGCCGCAGTTGGACAGCATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp AAGACCCAAGGAGAAGAGGCTGACATAGGCCTTGGAGGTTGCTCTTaGCTTCCCTCTTCCTCCTCTCTCACCAGCTCAAGAGAGAACGTA +
Preference number: 1 (lower is better)
Translates to: KTQGEEADIGLGGCS*LPSSSSLTSSRENV
Trigger: TACGTTCTCTCTTGAGCTGGTGAGAGAGGAGGAAGAGGGAAGTCAAGAGCAACCTCCAAGGCCTATGTCAGCCTCTTCTCCTTGGGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 90 bp TCTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACTaGCACATGGTCATCGTGCCCTCCTCTAAAGCAGAACTTCCTGTT +
Preference number: 1 (lower is better)
Translates to: SGCSSGCHPKIPLAD*HMVIVPSSKAELPV
Trigger: AACAGGAAGTTCTGCTTTAGAGGAGGGCACGATGACCATGTGGCAGTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 90 bp ACAGTGTCAGGTCAGACCCAGGCGTCCATACCCACGTCAACACGATaGCTTAGAGGTAGAATAAAGCATGCAATCACTCGGGGGTACATG +
Preference number: 1 (lower is better)
Translates to: TVSGQTQASIPTSTR*LRGRIKHAITRGYM
Trigger: CATGTACCCCCGAGTGATTGCATGCTTTATTCTACCTCTAAGCCATCGTGTTGACGTGGGTATGGACGCCTGGGTCTGACCTGACACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 90 bp GGTAAAGCTTCCTATGTTCCCAAAGATGAGCATTTGCTGCTGGGCTaGTCTGGTGCCTTCTGCCAAATATCAGCAGAGGGCTGTCAGCTC +
Preference number: 1 (lower is better)
Translates to: GKASYVPKDEHLLLG*SGAFCQISAEGCQL
Trigger: GAGCTGACAGCCCTCTGCTGATATTTGGCAGAAGGCACCAGACCAGCCCAGCAGCAAATGCTCATCTTTGGGAACATAGGAAGCTTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 90 bp GAACCACCTGGTGTGGGAGTGCTGCTGCTGACAGAGAATATGCAATaGTCCTCGCCACTGGTGTTAACACTAAAGGCTCTGCTAAAATGG +
Preference number: 1 (lower is better)
Translates to: EPPGVGVLLLTENMQ*SSPLVLTLKALLKW
Trigger: CCATTTTAGCAGAGCCTTTAGTGTTAACACCAGTGGCGAGGAGCATTGCATATTCTCTGTCAGCAGCAGCACTCCCACACCAGGTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 90 bp TATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTaGGAAGGTGGAGTCCAGACTGGTATGCCCTGTCCTGACCACAGG +
Preference number: 1 (lower is better)
Translates to: YNWITQFPQVLKVGV*EGGVQTGMPCPDHR
Trigger: CCTGTGGTCAGGACAGGGCATACCAGTCTGGACTCCACCTTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp CTCCCACAACTGGCAACTCAGCTGTCCCTAAAGAGGAAACTGTCATaGAATGTCAGAGCGTCAGCTGCAGGTTGTCTTGTCCCTTGGTTT +
Preference number: 1 (lower is better)
Translates to: LPQLATQLSLKRKLS*NVRASAAGCLVPWF
Trigger: AAACCAAGGGACAAGACAACCTGCAGCTGACGCTCTGACATTTCATGACAGTTTCCTCTTTAGGGACAGCTGAGTTGCCAGTTGTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 90 bp ACTGCAACATTGTCAAACACAATGAAACAGAACCAAGCCGTCCTATaGTGTCCAACTGCGGCATCAACAGCACCACAGCCTTGGCTGATG +
Preference number: 1 (lower is better)
Translates to: TATLSNTMKQNQAVL*CPTAASTAPQPWLM
Trigger: CATCAGCCAAGGCTGTGGTGCTGTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTTGACAATGTTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 90 bp CAGAAGCCTCCGTGTGACACTTCTAGGGAATATCTCTTTTGTGCTTaGTCAAAACGAAGAGGCAAATGGTTGGGACTGCTGGCCCTCAGA +
Preference number: 1 (lower is better)
Translates to: QKPPCDTSREYLFCA*SKRRGKWLGLLALR
Trigger: TCTGAGGGCCAGCAGTCCCAACCATTTGCCTCTTCGTTTTGACCAAGCACAAAAGAGATATTCCCTAGAAGTGTCACACGGAGGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 90 bp GTTCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACTGCCACATaGTCATCGTGCCCTCCTCTAAAGCAGAACTTCCTGTTATTTGAT +
Preference number: 1 (lower is better)
Translates to: VPRAAIPKFHLQTAT*SSCPPLKQNFLLFD
Trigger: ATCAAATAACAGGAAGTTCTGCTTTAGAGGAGGGCACGATGACCATGTGGCAGTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp CACATGGTCATCGTGCCCTCCTCTAAAGCAGAACTTCCTGTTATTTaGTCACAAAAGGCAGCCTCACAAGAAGTGAGCAGCAGGTGTGCA +
Preference number: 1 (lower is better)
Translates to: HMVIVPSSKAELPVI*SQKAASQEVSSRCA
Trigger: TGCACACCTGCTGCTCACTTCTTGTGAGGCTGCCTTTTGTGATCAAATAACAGGAAGTTCTGCTTTAGAGGAGGGCACGATGACCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp TCCCTCTTCCTCCTCTCTCACCAGCTCAAGAGAGAACGTAAAGAATaGCTGTCCCGCAGTCCAATGAATGGTGTCAAAACAGAGCCCAAT +
Preference number: 1 (lower is better)
Translates to: SLFLLSHQLKRERKE*LSRSPMNGVKTEPN
Trigger: ATTGGGCTCTGTTTTGACACCATTCATTGGACTGCGGGACAGTCATTCTTTACGTTCTCTCTTGAGCTGGTGAGAGAGGAGGAAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp GACAAGACACAAGAAATGAGAGGGTGTGTCCATCTGCTGCCATCTTaGAGGCTTTTGGAAGTGAGACAGGAAACCCAAGCTCCCAACCTA +
Preference number: 1 (lower is better)
Translates to: DKTQEMRGCVHLLPS*RLLEVRQETQAPNL
Trigger: TAGGTTGGGAGCTTGGGTTTCCTGTCTCACTTCCAAAAGCCTTCAAGATGGCAGCAGATGGACACACCCTCTCATTTCTTGTGTCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 90 bp AAGGCAAATTGCACAAAGCTGACACTGGGGGTGGAGCTTGGTATATaGCCACTGATCTCAACAATGGGGAGCTACTCTGACTTCAAGACA +
Preference number: 1 (lower is better)
Translates to: KANCTKLTLGVELGI*PLISTMGSYSDFKT
Trigger: TGTCTTGAAGTCAGAGTAGCTCCCCATTGTTGAGATCAGTGGGCATATACCAAGCTCCACCCCCAGTGTCAGCTTTGTGCAATTTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 90 bp GCTGCCATCCCAAAATTCCACTTGCAGACTGCCACATGGTCATCGTaGCCTCCTCTAAAGCAGAACTTCCTGTTATTTGATCACAAAAGG +
Preference number: 1 (lower is better)
Translates to: AAIPKFHLQTATWSS*PPLKQNFLLFDHKR
Trigger: CCTTTTGTGATCAAATAACAGGAAGTTCTGCTTTAGAGGAGGGCACGATGACCATGTGGCAGTCTGCAAGTGGAATTTTGGGATGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp GCAGGTTGTCTTGTCCCTTGGTTTCAAATTTTCGTAGTGCTTCACTaGACAGATGCCTTCACAACATGGAGGTATGCTGCTCTTGCTGAG +
Preference number: 1 (lower is better)
Translates to: AGCLVPWFQIFVVLH*TDAFTTWRYAALAE
Trigger: CTCAGCAAGAGCAGCATACCTCCATGTTGTGAAGGCATCTGTTCAGTGAAGCACTACGAAAATTTGAAACCAAGGGACAAGACAACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp TATCAGATGGACATCATCTCTCAATGCACTCCCAACTCACAGCAATaGAGGGAACAGGCACACAGAAATACAACAGACAGGGAATCCACC +
Preference number: 1 (lower is better)
Translates to: YQMDIISQCTPNSQQ*REQAHRNTTDREST
Trigger: GGTGGATTCCCTGTCTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATTGAGAGATGATGTCCATCTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 90 bp GCCCAGGAGAGAACATTTTCCTCAAATTTACTGATACAGGCCTCCTaGCATCTGACAGACAAGACACAAGAAATGAGAGGGTGTGTCCAT +
Preference number: 1 (lower is better)
Translates to: AQERTFSSNLLIQAS*HLTDKTQEMRGCVH
Trigger: ATGGACACACCCTCTCATTTCTTGTGTCTTGTCTGTCAGATGGCAGGAGGCCTGTATCAGTAAATTTGAGGAAAATGTTCTCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 90 bp GAAGTCAAGAAGTGTGAGGTGATGAGACCTCTACAAGGCAGTCTTTaGCACAGAAGCCTCCGTGTGACACTTCTAGGGAATATCTCTTTT +
Preference number: 1 (lower is better)
Translates to: EVKKCEVMRPLQGSL*HRSLRVTLLGNISF
Trigger: AAAAGAGATATTCCCTAGAAGTGTCACACGGAGGCTTCTGTGCCAAAGACTGCCTTGTAGAGGTCTCATCACCTCACACTTCTTGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 90 bp GAAGTGAGCAGCAGGTGTGCATTCATTCAACTTCCCCATGTGGAGTaGGAACTGGGAAAACCATTCAAATCAACAACATCTAGAGCACAC +
Preference number: 1 (lower is better)
Translates to: EVSSRCAFIQLPHVE*ELGKPFKSTTSRAH
Trigger: GTGTGCTCTAGATGTTGTTGATTTGAATGGTTTTCCCAGTTCCCACTCCACATGGGGAAGTTGAATGAATGCACACCTGCTGCTCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp GGAGCTTGGTATATGCCCACTGATCTCAACAATGGGGAGCTACTCTaGCTTCAAGACAATAGATATTCCCTAACAGGTCTAATCCCTGCT +
Preference number: 1 (lower is better)
Translates to: GAWYMPTDLNNGELL*LQDNRYSLTGLIPA
Trigger: AGCAGGGATTAGACCTGTTAGGGAATATCTATTGTCTTGAAGTCAGAGTAGCTCCCCATTGTTGAGATCAGTGGGCATATACCAAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 90 bp GCTGTCCCTAAAGAGGAAACTGTCATGAAATGTCAGAGCGTCAGCTaGAGGTTGTCTTGTCCCTTGGTTTCAAATTTTCGTAGTGCTTCA +
Preference number: 1 (lower is better)
Translates to: AVPKEETVMKCQSVS*RLSCPLVSNFRSAS
Trigger: TGAAGCACTACGAAAATTTGAAACCAAGGGACAAGACAACCTGCAGCTGACGCTCTGACATTTCATGACAGTTTCCTCTTTAGGGACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 90 bp GGAGGAAATATTAAAGTAGGTATTTTTGGTGAGGTAAAGGCAAATTaGACAAAGCTGACACTGGGGGTGGAGCTTGGTATATGCCCACTG +
Preference number: 1 (lower is better)
Translates to: GGNIKVGIFGEVKAN*TKLTLGVELGICPL
Trigger: CAGTGGGCATATACCAAGCTCCACCCCCAGTGTCAGCTTTGTGCAATTTGCCTTTACCTCACCAAAAATACCTACTTTAATATTTCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 90 bp CTTCCTGGCTCTGTTATCAATAACATGCCAGGAGGACATAAAGTTTaGCTTGTTCCAGGTCTTTCTGATATCTTACAGCACAGGGCATCA +
Preference number: 1 (lower is better)
Translates to: LPGSVINNMPGGHKV*LVPGLSDILQHRAS
Trigger: TGATGCCCTGTGCTGTAAGATATCAGAAAGACCTGGAACAAGGCAAACTTTATGTCCTCCTGGCATGTTATTGATAACAGAGCCAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp AACATTCACACTGCATTGACAAATTTCGACTGTATCATAACAACATaGCATACCAGCCCTCTCACCAAAAGCTCGCCCAGACATTCAGAG +
Preference number: 1 (lower is better)
Translates to: NIHTALTNFDCIITT*HTSPLTKSSPRHSE
Trigger: CTCTGAATGTCTGGGCGAGCTTTTGGTGAGAGGGCTGGTATGTCATGTTGTTATGATACAGTCGAAATTTGTCAATGCAGTGTGAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp GGGGCTGAAATCTGGCATGAAAACAGACTTAGCTTACAGTCACCATaGTCTCCAGGTCATGCTGGTTTATTTCAACTAAAGAAAGGTGTC +
Preference number: 1 (lower is better)
Translates to: GAEIWHENRLSLQSP*SPGHAGLFQLKKGV
Trigger: GACACCTTTCTTTAGTTGAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTTCATGCCAGATTTCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp TTATTGGATAAAGGCCGAGATGACAGAGCCACTGCTTCATCACACTaGCTCACATTTTGGTTTGCAATCCACTTTCCTCTCTCCTCATTT +
Preference number: 1 (lower is better)
Translates to: LLDKGRDDRATASSH*LTFWFAIHFPLSSF
Trigger: AAATGAGGAGAGAGGAAAGTGGATTGCAAACCAAAATGTGAGTCAGTGTGATGAAGCAGTGGCTCTGTCATCTCGGCCTTTATCCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp ACTCAAGCATGGACGCACATTGACATTGATTTAAATGTCCCTATGTaGAACAGAAACAGTAAGACGGTATCACTCATCACAAGCAGGCAG +
Preference number: 1 (lower is better)
Translates to: TQAWTHIDIDLNVPM*NRNSKTVSLITSRQ
Trigger: CTGCCTGCTTGTGATGAGTGATACCGTCTTACTGTTTCTGTTTCACATAGGGACATTTAAATCAATGTCAATGTGCGTCCATGCTTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp CAATCACTCGGGGGTACATGGGTTGTTCTTACCTGTCCGCATCAATaGGTCATTTCTAACTGTACCAAACTGAAAATTCACATCAAAGGA +
Preference number: 1 (lower is better)
Translates to: QSLGGTWVVLTCPHQ*VISNCTKLKIHIKG
Trigger: TCCTTTGATGTGAATTTTCAGTTTGGTACAGTTAGAAATGACTCATTGATGCGGACAGGTAAGAACAACCCATGTACCCCCGAGTGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp AGGTCATGCTGGTTTATTTCAACTAAAGAAAGGTGTCTGGTGAGTTaGAGGAATGACGTGGTGGAATATGGAGCCAATCATCTCCATAAT +
Preference number: 1 (lower is better)
Translates to: RSCWFISTKERCLVS*RNDVVEYGANHLHN
Trigger: ATTATGGAGATGATTGGCTCCATATTCCACCACGTCATTCCTTCAACTCACCAGACACCTTTCTTTAGTTGAAATAAACCAGCATGACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp TTATTTGAGGCTCAGATTCGTAGTTTTACAGGGATGAGCCACAGATaGAAGAACACAAACATGACATGTAGCTTCATTTCAGCAGAAAAA +
Preference number: 1 (lower is better)
Translates to: LFEAQIRSFTGMSHR*KNTNMTCSFISAEK
Trigger: TTTTTCTGCTGAAATGAAGCTACATGTCATGTTTGTGTTCTTTCATCTGTGGCTCATCCCTGTAAAACTACGAATCTGAGCCTCAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 90 bp TTCTTACCTGTCCGCATCAATGAGTCATTTCTAACTGTACCAAACTaGAAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTT +
Preference number: 1 (lower is better)
Translates to: FLPVRINESFLTVPN*KFTSKDLRMAQIGF
Trigger: AAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTTTCAGTTTGGTACAGTTAGAAATGACTCATTGATGCGGACAGGTAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAGCCTCCTCACCTCATaGGACACCAGCCTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPSLLTS*DTSLEA
Trigger: AGCCTCCAGGCTGGTGTCTCATGAGGTGAGGAGGCT...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 90 bp GGCAGCAGGCCACACTCACAGCTACAGGTACTGTACGTTAAGGACTaGCCAGGGAGGCACCAATGCCTCCTAGGCCAAGACGAGTCAATG +
Preference number: 2 (lower is better)
Translates to: GSRPHSQLQVLYVKD*PGRHQCLLGQDESM
Trigger: CATTGACTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAGTACCTGTAGCTGTGAGTGTGGCCTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 90 bp TCAGAAACAAGCTTGGGGAGCATTCCCCTGAGCTTCCCAAAGGCATaGCAGGAGGACAAGGACGCTGGCTTGCTCACTCAAGCATGGACG +
Preference number: 2 (lower is better)
Translates to: SETSLGSIPLSFPKA*QEDKDAGLLTQAWT
Trigger: CGTCCATGCTTGAGTGAGCAAGCCAGCGTCCTTGTCCTCCTGCAATGCCTTTGGGAAGCTCAGGGGAATGCTCCCCAAGCTTGTTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp GTTAAGGACTTGCCAGGGAGGCACCAATGCCTCCTAGGCCAAGACGAGTCAATGTTGTTTTCCCAGCACTaGGTCTCTGGCACTGCAGGG +
Preference number: 2 (lower is better)
Translates to: VKDLPGRHQCLLGQDESMLFSQH*VSGTAG
Trigger: CCCTGCAGTGCCAGAGACGCAGTGCTGGGAAAACAA...CATTGACTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGGAGGGAGTGACCGCGTaGGTCCCACGCCCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQEGVTA*VPRPFP
Trigger: TGGGAAGGGGCGTGGGACGCACGCGGTCACTCCCTC...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAACCAAGCCGTCCTATaGTGTCCAACTGCGGCATCA +
Preference number: 2 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPNQAVL*CPTAAS
Trigger: TGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTT...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAATTCCACTTGCAGACTaGCACATGGTCATCGTGCCC +
Preference number: 2 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPIPLAD*HMVIVP
Trigger: GGGCACGATGACCATGTGGCAGTCTGCAAGTGGAAT...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 90 bp GAAATCTCCCACTTTCCAGGCCTGGGGCGGCTGCTAGGGAGGGCCTaGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGT +
Preference number: 2 (lower is better)
Translates to: EISHFPGLGRLLGRA*YSTAMYSSLKTYVC
Trigger: ACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCCTCCCTAGCAGCCGCCCCAGGCCTGGAAAGTGGGAGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp CCAACACACCCAACGCAAGCTGTGAGGCTGGCCCAGGAGAGAACATTTTCCTCACTATGTTCCCAAAGATaGGCATTTGCTGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: PTHPTQAVRLAQERTFSSLCSQR*AFAAGL
Trigger: CAGCCCAGCAGCAAATGCTCATCTTTGGGAACATAG...TGAGGAAAATGTTCTCTCCTGGGCCAGCCTCACAGCTTGCGTTGGGTGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACCCAGGGAGGCACCAATaGCTCCTAGGCCAAGACGAG +
Preference number: 2 (lower is better)
Translates to: KHNETEPSRPMLSNCGINPGRHQ*LLGQDE
Trigger: CTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGG...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 90 bp ACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTaGCAGACTGCCACATGGTCATCGTGCCCTCCTCTAAAGCAGAAC +
Preference number: 2 (lower is better)
Translates to: TVTLDVPRAAIPKFH*QTATWSSCPPLKQN
Trigger: GTTCTGCTTTAGAGGAGGGCACGATGACCATGTGGCAGTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCTTCGTAGTGCTTCACTaGACAGATGCCTTCACAACA +
Preference number: 2 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSFVVLH*TDAFTT
Trigger: TGTTGTGAAGGCATCTGTTCAGTGAAGCACTACGAA...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp CCAACACACCCAACGCAAGCTGTGAGGCTGGCCCAGGAGAGAACATTTTCCTCAAATCTGGCTGCACACTaGGGAGACTTTAGCTTAGCT +
Preference number: 2 (lower is better)
Translates to: PTHPTQAVRLAQERTFSSNLAAH*GDFSLA
Trigger: AGCTAAGCTAAAGTCTCCTCAGTGTGCAGCCAGATT...TGAGGAAAATGTTCTCTCCTGGGCCAGCCTCACAGCTTGCGTTGGGTGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp CCAACACACCCAACGCAAGCTGTGAGGCTGGCCCAGGAGAGAACATTTTCCTCACATCTGCTGCCATCTTaGAGGCTTTTGGAAGTGAGA +
Preference number: 2 (lower is better)
Translates to: PTHPTQAVRLAQERTFSSHLLPS*RLLEVR
Trigger: TCTCACTTCCAAAAGCCTTCAAGATGGCAGCAGATG...TGAGGAAAATGTTCTCTCCTGGGCCAGCCTCACAGCTTGCGTTGGGTGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAGATGCCTTCACAACATaGAGGTATGCTGCTCTTGCT +
Preference number: 2 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPDAFTT*RYAALA
Trigger: AGCAAGAGCAGCATACCTCCATGTTGTGAAGGCATC...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 90 bp CCCCTGAGCTTCCCAAAGGCATTGCAGGAGGACAAGGACGCTGGCTaGCTCACTCAAGCATGGACGCACATTGACATTGATTTAAATGTC +
Preference number: 2 (lower is better)
Translates to: PLSFPKALQEDKDAG*LTQAWTHIDIDLNV
Trigger: GACATTTAAATCAATGTCAATGTGCGTCCATGCTTGAGTGAGCAAGCCAGCGTCCTTGTCCTCCTGCAATGCCTTTGGGAAGCTCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp GTTAAGGACTTGCCAGGGAGGCACCAATGCCTCCTAGGCCAAGACGAGTCAATGAAGAGGAAACTGTCATaGAATGTCAGAGCGTCAGCT +
Preference number: 2 (lower is better)
Translates to: VKDLPGRHQCLLGQDESMKRKLS*NVRASA
Trigger: AGCTGACGCTCTGACATTTCATGACAGTTTCCTCTT...CATTGACTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCACCTCCTCCTCATCCTTaGAAAGCAGGCCCCGGGTTC +
Preference number: 2 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPPPPHP*KAGPGF
Trigger: GAACCCGGGGCCTGCTTTTCAAGGATGAGGAGGAGG...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTTGCATCTGAACCTGGTCATTGTCTaGAATGCAGCCTGTAACCAC +
Preference number: 2 (lower is better)
Translates to: SDLDVLPADQYFQVNLHLNLVIV*NAACNH
Trigger: GTGGTTACAGGCTGCATTTCAGACAATGACCAGGTT...CAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp CACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACAGGTGTCTGGTGAGTTaGAGGAATGACGTGGTGGAA +
Preference number: 2 (lower is better)
Translates to: HSNSGCSSGCHPKIPLADRCLVS*RNDVVE
Trigger: TTCCACCACGTCATTCCTTCAACTCACCAGACACCT...GTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCACCCACGTCAACACGATaGCTTAGAGGTAGAATAAAG +
Preference number: 2 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPPTSTR*LRGRIK
Trigger: CTTTATTCTACCTCTAAGCCATCGTGTTGACGTGGG...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACTGGCTGATGCGAGGATaGCCTGCAGTTAAAAGTGGG +
Preference number: 2 (lower is better)
Translates to: KHNETEPSRPMLSNCGINWLMRG*PAVKSG
Trigger: CCCACTTTTAACTGCAGGTCATCCTCGCATCAGCCA...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCAAGATGAGCATTTGCTaGTGGGCTGGTCTGGTGCCT +
Preference number: 2 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCKMSIC*WAGLVP
Trigger: AGGCACCAGACCAGCCCAGCAGCAAATGCTCATCTT...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGTCAGAGCCAGCCATCTaGCTCTCACTAGGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQSEPAI*LSLGEG
Trigger: TCCCTCTCCTAGTGAGAGGCAGATGGCTGGCTCTGA...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGCATTTGCTGCTGGGCTaGTCTGGTGCCTTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQHLLLG*SGAFCQ
Trigger: TTGGCAGAAGGCACCAGACCAGCCCAGCAGCAAATG...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCATGAGCATTTGCTGCTaGGCTGGTCTGGTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCMSICC*AGLVPS
Trigger: AGAAGGCACCAGACCAGCCCAGCAGCAAATGCTCAT...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGCTAAGCCTGGCTGGGTaGTATGTTCCCTCCCCATTG +
Preference number: 2 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQLSLAG*YVPSPL
Trigger: CAATGGGGAGGGAACATACCACCCAGCCAGGCTTAG...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp CACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACTTCAACTTCCCCATGTaGAGTGGGAACTGGGAAAAC +
Preference number: 2 (lower is better)
Translates to: HSNSGCSSGCHPKIPLADFNFPM*SGNWEN
Trigger: GTTTTCCCAGTTCCCACTCCACATGGGGAAGTTGAA...GTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 90 bp AGACAAGACACAAGAAATGAGAGGGTGTGTCCATCTGCTGCCATCTaGAAGGCTTTTGGAAGTGAGACAGGAAACCCAAGCTCCCAACCT +
Preference number: 2 (lower is better)
Translates to: RQDTRNERVCPSAAI*KAFGSETGNPSSQP
Trigger: AGGTTGGGAGCTTGGGTTTCCTGTCTCACTTCCAAAAGCCTTCAAGATGGCAGCAGATGGACACACCCTCTCATTTCTTGTGTCTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAATGGTCTGGTGCCTTCTaGCAAATATCAGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: PYNWITQFPQVLKVGVWEWSGAF*QISAEG
Trigger: GCCCTCTGCTGATATTTGGCAGAAGGCACCAGACCA...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp CACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACTGCGTCTCTAAAATCTaGTCAGTTCCTAGGACTCCT +
Preference number: 2 (lower is better)
Translates to: HSNSGCSSGCHPKIPLADCVSKI*SVPRTP
Trigger: AGGAGTCCTAGGAACTGAGCAGATTTTAGAGACGCA...GTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp GTAAGAAAAAGCAGTGCCCATGCTTGCTACAAATCACAAGGCTCTCTTAAACATCCAGCACTGCGTCTCTaGCACTGCAGGGACATTCCG +
Preference number: 2 (lower is better)
Translates to: VRKSSAHACYKSQGSLKHPALRL*HCRDIP
Trigger: CGGAATGTCCCTGCAGTGCCAGAGACGCAGTGCTGG...ATGTTTAAGAGAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTTTTTCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGTCACTCGGGGGTACATaGGTTGTTCTTACCTGTCCG +
Preference number: 2 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQSLGGT*VVLTCP
Trigger: CGGACAGGTAAGAACAACCCATGTACCCCCGAGTGA...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCAATGGTTGGGACTGCTaGCCCTCAGAGGCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: NIFFCHTERVRQSYSGCINGWDC*PSEAQG
Trigger: CCCCTGGGCCTCTGAGGGCCAGCAGTCCCAACCATT...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 90 bp ACTTCAGGGGTGTCTAGGCCAAAAGCGCCTTTAAGAGATGCTGGTTaGTTATTGGATAAAGGCCGAGATGACAGAGCCACTGCTTCATCA +
Preference number: 2 (lower is better)
Translates to: TSGVSRPKAPLRDAG*LLDKGRDDRATASS
Trigger: TGATGAAGCAGTGGCTCTGTCATCTCGGCCTTTATCCAATAACAAACCAGCATCTCTTAAAGGCGCTTTTGGCCTAGACACCCCTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCTGGGGAGCATTCCCCTaGGCTTCCCAAAGGCATTGC +
Preference number: 2 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFWGAFP*ASQRHC
Trigger: GCAATGCCTTTGGGAAGCTCAGGGGAATGCTCCCCA...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCACAAATTGCACAAAGCTaGCACTGGGGGTGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPQIAQS*HWGWSL
Trigger: CAAGCTCCACCCCCAGTGTCAGCTTTGTGCAATTTG...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCGGCCCGTCCAGGTACTaGTTTTCCTTCCTGACCAGG +
Preference number: 2 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFGPSRY*FSFLTR
Trigger: CCTGGTCAGGAAGGAAAATCAGTACCTGGACGGGCC...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAGAAAGAACACAAACATaGCATGTAGCTTCATTTCAG +
Preference number: 2 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPERTQT*HVASFQ
Trigger: CTGAAATGAAGCTACATGTCATGTTTGTGTTCTTTC...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCCACCACAGCCTTGGCTaGTGCGAGGATGACCTGCAG +
Preference number: 2 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGHHSLG*CEDDLQ
Trigger: CTGCAGGTCATCCTCGCATCAGCCAAGGCTGTGGTG...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGGGTGAGTTGAAGGAATaGCGTGGTGGAATATGGAGC +
Preference number: 2 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQGELKE*RGGIWS
Trigger: GCTCCATATTCCACCACGTCATTCCTTCAACTCACC...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAAAGCTTACAGTCACCATaGTCTCCAGGTCATGCTGGT +
Preference number: 2 (lower is better)
Translates to: PYNWITQFPQVLKVGVWESLQSP*SPGHAG
Trigger: ACCAGCATGACCTGGAGATCATGGTGACTGTAAGCT...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGTGGGAGTGCTGCTGCTaGCAGAGAATATGCAATGCT +
Preference number: 2 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQWECCC*QRICNA
Trigger: AGCATTGCATATTCTCTGTCAGCAGCAGCACTCCCA...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp AAGCCTCCGTGTGACACTTCTAGGGAATATCTCTTTTGTGCTTGGTCAAAACGAGCCAAGACGAGTCAATaGCCACAGAGGCCAATTCCA +
Preference number: 2 (lower is better)
Translates to: KPPCDTSREYLFCAWSKRAKTSQ*PQRPIP
Trigger: TGGAATTGGCCTCTGTGGGCATTGACTCGTCTTGGC...TCGTTTTGACCAAGCACAAAAGAGATATTCCCTAGAAGTGTCACACGGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGCCCCAGCCCTATAATTaGATCACCCAGTTTCCACAG +
Preference number: 2 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQPQPYN*ITQFPQ
Trigger: CTGTGGAAACTGGGTGATCCAATTATAGGGCTGGGG...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTaGCATCTGAAGCAGCGCCTTAACACAGCTGTTTCATTAAAAATA +
Preference number: 2 (lower is better)
Translates to: SDLDVLPADQYFQVN*HLKQRLNTAVSLKI
Trigger: TATTTTTAATGAAACAGCTGTGTTAAGGCGCTGCTTCAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp CACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACAATGGGGAGCTACTCTaGCTTCAAGACAATAGATAT +
Preference number: 2 (lower is better)
Translates to: HSNSGCSSGCHPKIPLADNGELL*LQDNRY
Trigger: ATATCTATTGTCTTGAAGTCAGAGTAGCTCCCCATT...GTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAATTGGTATATGCCCACTaGTCTCAACAATGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: PYNWITQFPQVLKVGVWELVYAH*SQQWGA
Trigger: AGCTCCCCATTGTTGAGATCAGTGGGCATATACCAA...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp CACTGCATTGACAAATTTCGACTGTATCATAACAACATGACATACCAGCCCTCTGCTTCCCAAAGGCATTaGAGGAGGACAAGGACGCTG +
Preference number: 2 (lower is better)
Translates to: HCIDKFRLYHNNMTYQPSASQRH*RRTRTL
Trigger: CAGCGTCCTTGTCCTCCTGCAATGCCTTTGGGAAGC...AGAGGGCTGGTATGTCATGTTGTTATGATACAGTCGAAATTTGTCAATGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 90 bp TGCTTCACTGAACAGATGCCTTCACAACATGGAGGTATGCTGCTCTaGCTGAGAGATATTCTAGCCTCACAGACTCCACCATGGAATAAA +
Preference number: 2 (lower is better)
Translates to: CFTEQMPSQHGGMLL*LRDILASQTPPWNK
Trigger: TTTATTCCATGGTGGAGTCTGTGAGGCTAGAATATCTCTCAGCAAGAGCAGCATACCTCCATGTTGTGAAGGCATCTGTTCAGTGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 90 bp ACTGTCATGAAATGTCAGAGCGTCAGCTGCAGGTTGTCTTGTCCCTaGGTTTCAAATTTTCGTAGTGCTTCACTGAACAGATGCCTTCAC +
Preference number: 2 (lower is better)
Translates to: TVMKCQSVSCRLSCP*VSNFRSASLNRCLH
Trigger: GTGAAGGCATCTGTTCAGTGAAGCACTACGAAAATTTGAAACCAAGGGACAAGACAACCTGCAGCTGACGCTCTGACATTTCATGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGTACAGGGTGGGTTGGTaGAAAAATGGATTCCTGGTT +
Preference number: 2 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQYRVGW*KNGFLV
Trigger: AACCAGGAATCCATTTTTTCACCAACCCACCCTGTA...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCTGTCAGAGCGTCAGCTaGAGGTTGTCTTGTCCCTTG +
Preference number: 2 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFCQSVS*RLSCPL
Trigger: CAAGGGACAAGACAACCTGCAGCTGACGCTCTGACA...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp CACTGCATTGACAAATTTCGACTGTATCATAACAACATGACATACCAGCCCTCTGCTGCCTTCTGTTCCTaGCTCCTCCTCATCCTTGAA +
Preference number: 2 (lower is better)
Translates to: HCIDKFRLYHNNMTYQPSAAFCS*LLLILE
Trigger: TTCAAGGATGAGGAGGAGGCAGGAACAGAAGGCAGC...AGAGGGCTGGTATGTCATGTTGTTATGATACAGTCGAAATTTGTCAATGCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCACAAGGACGCTGGCTTaGTCACTCAAGCATGGACGC +
Preference number: 2 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGTRTLA*SLKHGR
Trigger: GCGTCCATGCTTGAGTGAGCAAGCCAGCGTCCTTGT...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCACAAAGGGCTCGCTGTTaGATTTGTCATTTTCGAGGC +
Preference number: 2 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPQRARC*ICHFRG
Trigger: GCCTCGAAAATGACAAATGCAACAGCGAGCCCTTTG...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCGTGACCTTGACGTGCTaGCCGCTGACCAGTATTTCC +
Preference number: 2 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGVTLTC*PLTSIS
Trigger: GGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCAC...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGGGCCTTGTATTCCACTaGCATGTATTCAAGCCTCAA +
Preference number: 2 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQGLVFH*HVFKPQ
Trigger: TTGAGGCTTGAATACATGGCAGTGGAATACAAGGCC...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCCAGTCCCCAGGAATCTaGCTGCACACTGAGGAGACT +
Preference number: 2 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGQSPGI*LHTEET
Trigger: AGTCTCCTCAGTGTGCAGCCAGATTCCTGGGGACTG...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 90 bp CCTAAAGAGGAAACTGTCATGAAATGTCAGAGCGTCAGCTGCAGGTaGTCTTGTCCCTTGGTTTCAAATTTTCGTAGTGCTTCACTGAAC +
Preference number: 2 (lower is better)
Translates to: PKEETVMKCQSVSCR*SCPLVSNFRSASLN
Trigger: GTTCAGTGAAGCACTACGAAAATTTGAAACCAAGGGACAAGACAACCTGCAGCTGACGCTCTGACATTTCATGACAGTTTCCTCTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 90 bp CTGGCTCTGTTATCAATAACATGCCAGGAGGACATAAAGTTTGCCTaGTTCCAGGTCTTTCTGATATCTTACAGCACAGGGCATCACATG +
Preference number: 2 (lower is better)
Translates to: LALLSITCQEDIKFA*FQVFLISYSTGHHM
Trigger: CATGTGATGCCCTGTGCTGTAAGATATCAGAAAGACCTGGAACAAGGCAAACTTTATGTCCTCCTGGCATGTTATTGATAACAGAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCATGTATCATAACAACATaGCATACCAGCCCTCTCACC +
Preference number: 2 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPCIITT*HTSPLT
Trigger: GGTGAGAGGGCTGGTATGTCATGTTGTTATGATACA...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCAGGGATGAGCCACAGATaGAAGAACACAAACATGACA +
Preference number: 2 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPGMSHR*KNTNMT
Trigger: TGTCATGTTTGTGTTCTTTCATCTGTGGCTCATCCC...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCTGTACGTTAAGGACTTaGCAGGGAGGCACCAATGCC +
Preference number: 2 (lower is better)
Translates to: NIFFCHTERVRQSYSGCICTLRT*QGGTNA
Trigger: GGCATTGGTGCCTCCCTGGCAAGTCCTTAACGTACA...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACGGTTGTCTTGTCCCTTaGTTTCAAATTTTCGTAGTG +
Preference number: 2 (lower is better)
Translates to: KHNETEPSRPMLSNCGINGCLVP*FQIFVV
Trigger: CACTACGAAAATTTGAAACCAAGGGACAAGACAACC...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACCAGCCTCACAAGAAGTaGGCAGCAGGTGTGCATTCA +
Preference number: 2 (lower is better)
Translates to: TVVIYSILCFYVICQCRYQPHKK*AAGVHS
Trigger: TGAATGCACACCTGCTGCTCACTTCTTGTGAGGCTG...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACCCTATGCTGTCCAACTaGGGCATCAACAGCACCACA +
Preference number: 2 (lower is better)
Translates to: TVVIYSILCFYVICQCRYPMLSN*GINSTT
Trigger: TGTGGTGCTGTTGATGCCGCAGTTGGACAGCATAGG...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCCTGATACAGGCCTCCTaGCATCTGACAGACAAGACA +
Preference number: 2 (lower is better)
Translates to: NIFFCHTERVRQSYSGCILIQAS*HLTDKT
Trigger: TGTCTTGTCTGTCAGATGGCAGGAGGCCTGTATCAG...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp GTAAGAAAAAGCAGTGCCCATGCTTGCTACAAATCACAAGGCTCTCTTAAACATCATTGTCAAACACAATaGAACAGAACCAAGCCGTCC +
Preference number: 2 (lower is better)
Translates to: VRKSSAHACYKSQGSLKHHCQTQ*NRTKPS
Trigger: GGACGGCTTGGTTCTGTTTCATTGTGTTTGACAATG...ATGTTTAAGAGAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTTTTTCTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGTTCTTTGTTTCTACGTaGTTTGTCAATGCCGATACT +
Preference number: 2 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQFFVST*FVNADT
Trigger: AGTATCGGCATTGACAAATCACGTAGAAACAAAGAA...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp AAGCCTCCGTGTGACACTTCTAGGGAATATCTCTTTTGTGCTTGGTCAAAACGAATCTGTAATGTACACTaGACTTCCTGGCTCTGTTAT +
Preference number: 2 (lower is better)
Translates to: KPPCDTSREYLFCAWSKRICNVH*TSWLCY
Trigger: ATAACAGAGCCAGGAAGTCCAGTGTACATTACAGAT...TCGTTTTGACCAAGCACAAAAGAGATATTCCCTAGAAGTGTCACACGGAGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCGCTTCACTGAACAGATaGCTTCACAACATGGAGGTA +
Preference number: 2 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGASLNR*LHNMEV
Trigger: TACCTCCATGTTGTGAAGGCATCTGTTCAGTGAAGC...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCGTGGAGCTTGGTATATaGCCACTGATCTCAACAATG +
Preference number: 2 (lower is better)
Translates to: NIFFCHTERVRQSYSGCIVELGI*PLISTM
Trigger: CATTGTTGAGATCAGTGGGCATATACCAAGCTCCAC...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp GTAAGAAAAAGCAGTGCCCATGCTTGCTACAAATCACAAGGCTCTCTTAAACATTTGCTCACTCAAGCATaGACGCACATTGACATTGAT +
Preference number: 2 (lower is better)
Translates to: VRKSSAHACYKSQGSLKHLLTQA*THIDID
Trigger: ATCAATGTCAATGTGCGTCCATGCTTGAGTGAGCAA...ATGTTTAAGAGAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTTTTTCTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAAATCTCCAGGTCATGCTaGTTTATTTCAACTAAAGAA +
Preference number: 2 (lower is better)
Translates to: PYNWITQFPQVLKVGVWEISRSC*FISTKE
Trigger: TTCTTTAGTTGAAATAAACCAGCATGACCTGGAGAT...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACGGTGGGGCTGAAATCTaGCATGAAAACAGACTTAGC +
Preference number: 2 (lower is better)
Translates to: TVVIYSILCFYVICQCRYGGAEI*HENRLS
Trigger: GCTAAGTCTGTTTTCATGCCAGATTTCAGCCCCACC...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp CACTGCATTGACAAATTTCGACTGTATCATAACAACATGACATACCAGCCCTCTAGTAGGTATTTTTGGTaGGGTAAAGGCAAATTGCAC +
Preference number: 2 (lower is better)
Translates to: HCIDKFRLYHNNMTYQPSSRYFW*GKGKLH
Trigger: GTGCAATTTGCCTTTACCTCACCAAAAATACCTACT...AGAGGGCTGGTATGTCATGTTGTTATGATACAGTCGAAATTTGTCAATGCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCGTAGTTTTACAGGGATaGGCCACAGATGAAAGAACA +
Preference number: 2 (lower is better)
Translates to: NIFFCHTERVRQSYSGCIVVLQG*ATDERT
Trigger: TGTTCTTTCATCTGTGGCTCATCCCTGTAAAACTAC...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCGAACTTCCTGTTATTTaGTCACAAAAGGCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: NIFFCHTERVRQSYSGCIELPVI*SQKAAS
Trigger: TGAGGCTGCCTTTTGTGATCAAATAACAGGAAGTTC...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCAACAGGTCTAATCCCTaGTCTGATGACAGTGAACAA +
Preference number: 2 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGNRSNP*SDDSEQ
Trigger: TTGTTCACTGTCATCAGAGCAGGGATTAGACCTGTT...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR TCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCCTAACTGTACCAAACTaGAAATTCACATCAAAGGAC +
Preference number: 2 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFLTVPN*KFTSKD
Trigger: GTCCTTTGATGTGAATTTTCAGTTTGGTACAGTTAG...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CCA 90 bp GTAAGAAAAAGCAGTGCCCATGCTTGCTACAAATCACAAGGCTCTCTTAAACATTATCTCTTTTGTGCTTaGTCAAAACGAAGAGGCAAA +
Preference number: 2 (lower is better)
Translates to: VRKSSAHACYKSQGSLKHYLFCA*SKRRGK
Trigger: TTTGCCTCTTCGTTTTGACCAAGCACAAAAGAGATA...ATGTTTAAGAGAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTTTTTCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCGTAGAACATTCACACTaGATTGACAAATTTCGACTG +
Preference number: 2 (lower is better)
Translates to: NIFFCHTERVRQSYSGCIVEHSH*IDKFRL
Trigger: CAGTCGAAATTTGTCAATGCAGTGTGAATGTTCTAC...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR GCA 90 bp GTAAGAAAAAGCAGTGCCCATGCTTGCTACAAATCACAAGGCTCTCTTAAACATCTGTTATCAATAACATaGCAGGAGGACATAAAGTTT +
Preference number: 2 (lower is better)
Translates to: VRKSSAHACYKSQGSLKHLLSIT*QEDIKF
Trigger: AAACTTTATGTCCTCCTGGCATGTTATTGATAACAG...ATGTTTAAGAGAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTTTTTCTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 72 bp CACCCTCAGTGCAGCCAGCAACCCATCTGGCCAGACTaGAACCCAGTTCTAACCCACCCCAAGACCCAAGGA +
Preference number: 3 (lower is better)
Translates to: HPQCSQQPIWPD*NPVLTHPKTQG
Trigger: TCCTTGGGTCTTGGGGTGGGTTAGAACTGGGTTCCAGTCTGGCCAGATGGGTTGCTGGCTGCACTGAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 72 bp AGAGCCCAGAACCACCTGGTGTGGGAGTGCTGCTGCTaGCAGAGAATATGCAATGCTCCTCGCCACTGGTGT +
Preference number: 3 (lower is better)
Translates to: RAQNHLVWECCC*QRICNAPRHWC
Trigger: ACACCAGTGGCGAGGAGCATTGCATATTCTCTGTCAGCAGCAGCACTCCCACACCAGGTGGTTCTGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp ACAGGCAGCCCATCTTCTGAGAAGAATCACCCTCAGTaGAGCCAGCAACCCATCTGGCCAGACTGGAACCCA +
Preference number: 3 (lower is better)
Translates to: TGSPSSEKNHPQ*SQQPIWPDWNP
Trigger: TGGGTTCCAGTCTGGCCAGATGGGTTGCTGGCTGCACTGAGGGTGATTCTTCTCAGAAGATGGGCTGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCACTGTACGTTAAGGACTaGCCAGGGAGGCACCAATGC +
Preference number: 3 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPLYVKD*PGRHQC
Trigger: GCATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAG...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 72 bp CCACACTCAGCAGTCCCCAGGAATCTGGCTGCACACTaGGGAGACTTTAGCTTAGCTGGACACAAAGGGCTC +
Preference number: 3 (lower is better)
Translates to: PHSAVPRNLAAH*GDFSLAGHKGL
Trigger: GAGCCCTTTGTGTCCAGCTAAGCTAAAGTCTCCTCAGTGTGCAGCCAGATTCCTGGGGACTGCTGAGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp GTACTGTACGTTAAGGACTTGCCAGGGAGGCACCAATaGCTCCTAGGCCAAGACGAGTCAATGCCCACAGAG +
Preference number: 3 (lower is better)
Translates to: VLYVKDLPGRHQ*LLGQDESMPTE
Trigger: CTCTGTGGGCATTGACTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp GATGAGCATTTGCTGCTGGGCTGGTCTGGTGCCTTCTaGCAAATATCAGCAGAGGGCTGTCAGCTCGCCATT +
Preference number: 3 (lower is better)
Translates to: DEHLLLGWSGAF*QISAEGCQLAI
Trigger: AATGGCGAGCTGACAGCCCTCTGCTGATATTTGGCAGAAGGCACCAGACCAGCCCAGCAGCAAATGCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 72 bp CTACTAGGACCAGCCTACAGAGAGCCCAGAACCACCTaGTGTGGGAGTGCTGCTGCTGACAGAGAATATGCA +
Preference number: 3 (lower is better)
Translates to: LLGPAYREPRTT*CGSAAADREYA
Trigger: TGCATATTCTCTGTCAGCAGCAGCACTCCCACACCAGGTGGTTCTGGGCTCTCTGTAGGCTGGTCCTAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 72 bp CTGCGAACAATCAATCCTGTCCAACAGGGGTGTTGCTaGGTGTCACCTACTAGGACCAGCCTACAGAGAGCC +
Preference number: 3 (lower is better)
Translates to: LRTINPVQQGCC*VSPTRTSLQRA
Trigger: GGCTCTCTGTAGGCTGGTCCTAGTAGGTGACACCCAGCAACACCCCTGTTGGACAGGATTGATTGTTCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 72 bp GTCCAACTGCGGCATCAACAGCACCACAGCCTTGGCTaGTGCGAGGATGACCTGCAGTTAAAAGTGGGCTTA +
Preference number: 3 (lower is better)
Translates to: VQLRHQQHHSLG*CEDDLQLKVGL
Trigger: TAAGCCCACTTTTAACTGCAGGTCATCCTCGCATCAGCCAAGGCTGTGGTGCTGTTGATGCCGCAGTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 72 bp TCTTCTGTCTTCCTCTGGATTTTTAACCCGGGCGAATaGAATCTCCCACTTTCCAGGCCTGGGGCGGCTGCT +
Preference number: 3 (lower is better)
Translates to: SSVFLWIFNPGE*NLPLSRPGAAA
Trigger: AGCAGCCGCCCCAGGCCTGGAAAGTGGGAGATTTCATTCGCCCGGGTTAAAAATCCAGAGGAAGACAGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp CCTGGGGCGGCTGCTAGGGAGGGCCTTGTATTCCACTaGCATGTATTCAAGCCTCAAAACCTATGTCTGTCT +
Preference number: 3 (lower is better)
Translates to: PGAAAREGLVFH*HVFKPQNLCLS
Trigger: AGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCCTCCCTAGCAGCCGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp TCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACTaGCACATGGTCATCGTGCCCTCCTCTAAAGCAGAA +
Preference number: 3 (lower is better)
Translates to: SSGCHPKIPLAD*HMVIVPSSKAE
Trigger: TTCTGCTTTAGAGGAGGGCACGATGACCATGTGGCAGTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAAGCAGTGCCCATGCTaGCTACAAATCACAAGGCTC +
Preference number: 3 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPKQCPC*LQITRL
Trigger: GAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTT...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp TGCACAAAGCTGACACTGGGGGTGGAGCTTGGTATATaGCCACTGATCTCAACAATGGGGAGCTACTCTGAC +
Preference number: 3 (lower is better)
Translates to: CTKLTLGVELGI*PLISTMGSYSD
Trigger: GTCAGAGTAGCTCCCCATTGTTGAGATCAGTGGGCATATACCAAGCTCCACCCCCAGTGTCAGCTTTGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp GGTGTGGGAGTGCTGCTGCTGACAGAGAATATGCAATaGTCCTCGCCACTGGTGTTAACACTAAAGGCTCTG +
Preference number: 3 (lower is better)
Translates to: GVGVLLLTENMQ*SSPLVLTLKAL
Trigger: CAGAGCCTTTAGTGTTAACACCAGTGGCGAGGAGCATTGCATATTCTCTGTCAGCAGCAGCACTCCCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp AGACTGCGAACAATCAATCCTGTCCAACAGGGGTGTTaGTGGGTGTCACCTACTAGGACCAGCCTACAGAGA +
Preference number: 3 (lower is better)
Translates to: RLRTINPVQQGC*WVSPTRTSLQR
Trigger: TCTCTGTAGGCTGGTCCTAGTAGGTGACACCCAGCAACACCCCTGTTGGACAGGATTGATTGTTCGCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 72 bp GGTCAGACCCAGGCGTCCATACCCACGTCAACACGATaGCTTAGAGGTAGAATAAAGCATGCAATCACTCGG +
Preference number: 3 (lower is better)
Translates to: GQTQASIPTSTR*LRGRIKHAITR
Trigger: CCGAGTGATTGCATGCTTTATTCTACCTCTAAGCCATCGTGTTGACGTGGGTATGGACGCCTGGGTCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 72 bp TCCTATGTTCCCAAAGATGAGCATTTGCTGCTGGGCTaGTCTGGTGCCTTCTGCCAAATATCAGCAGAGGGC +
Preference number: 3 (lower is better)
Translates to: SYVPKDEHLLLG*SGAFCQISAEG
Trigger: GCCCTCTGCTGATATTTGGCAGAAGGCACCAGACCAGCCCAGCAGCAAATGCTCATCTTTGGGAACATAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 72 bp GCTGCCATCCCAAAATTCCACTTGCAGACTGCCACATaGTCATCGTGCCCTCCTCTAAAGCAGAACTTCCTG +
Preference number: 3 (lower is better)
Translates to: AAIPKFHLQTAT*SSCPPLKQNFL
Trigger: CAGGAAGTTCTGCTTTAGAGGAGGGCACGATGACCATGTGGCAGTCTGCAAGTGGAATTTTGGGATGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 72 bp ATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTaGGAAGGTGGAGTCCAGACTGGTATGCCCTGTCCT +
Preference number: 3 (lower is better)
Translates to: ITQFPQVLKVGV*EGGVQTGMPCP
Trigger: AGGACAGGGCATACCAGTCTGGACTCCACCTTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp CACACTCACAGCTACAGGTACTGTACGTTAAGGACTTGCCAGGGAGGCACCAATGAGATGTTTCTGTGGTaGTTTTCCCAGCACTGCGTC +
Preference number: 3 (lower is better)
Translates to: HTHSYRYCTLRTCQGGTNEMFLW*FSQHCV
Trigger: GACGCAGTGCTGGGAAAACAACCACAGAAACATCTC...ATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAGTACCTGTAGCTGTGAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACAGCTTCCCAAAGGCATaGCAGGAGGACAAGGACGCT +
Preference number: 3 (lower is better)
Translates to: KHNETEPSRPMLSNCGINSFPKA*QEDKDA
Trigger: AGCGTCCTTGTCCTCCTGCAATGCCTTTGGGAAGCT...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp TCCCAAAGGCATTGCAGGAGGACAAGGACGCTGGCTTaGTCACTCAAGCATGGACGCACATTGACATTGATT +
Preference number: 3 (lower is better)
Translates to: SQRHCRRTRTLA*SLKHGRTLTLI
Trigger: AATCAATGTCAATGTGCGTCCATGCTTGAGTGAGCAAGCCAGCGTCCTTGTCCTCCTGCAATGCCTTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp ACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTaGCATCCCAAAATTCCACTTGCAGACTGCCACATG +
Preference number: 3 (lower is better)
Translates to: TKSHSNSGCSSG*HPKIPLADCHM
Trigger: CATGTGGCAGTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 72 bp GGCAAATTGCACAAAGCTGACACTGGGGGTGGAGCTTaGTATATGCCCACTGATCTCAACAATGGGGAGCTA +
Preference number: 3 (lower is better)
Translates to: GKLHKADTGGGA*YMPTDLNNGEL
Trigger: TAGCTCCCCATTGTTGAGATCAGTGGGCATATACCAAGCTCCACCCCCAGTGTCAGCTTTGTGCAATTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCTCTACAAGGCAGTCTTaGGCACAGAAGCCTCCGTGT +
Preference number: 3 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCSTRQS*AQKPPC
Trigger: ACACGGAGGCTTCTGTGCCAAAGACTGCCTTGTAGA...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp TTGTCAAACACAATGAAACAGAACCAAGCCGTCCTATaGTGTCCAACTGCGGCATCAACAGCACCACAGCCT +
Preference number: 3 (lower is better)
Translates to: LSNTMKQNQAVL*CPTAASTAPQP
Trigger: AGGCTGTGGTGCTGTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTTGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 72 bp AAGTGTGAGGTGATGAGACCTCTACAAGGCAGTCTTTaGCACAGAAGCCTCCGTGTGACACTTCTAGGGAAT +
Preference number: 3 (lower is better)
Translates to: KCEVMRPLQGSL*HRSLRVTLLGN
Trigger: ATTCCCTAGAAGTGTCACACGGAGGCTTCTGTGCCAAAGACTGCCTTGTAGAGGTCTCATCACCTCACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGAGCGTCAGCTGCAGGTaGTCTTGTCCCTTGGTTTCA +
Preference number: 3 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQSVSCR*SCPLVS
Trigger: TGAAACCAAGGGACAAGACAACCTGCAGCTGACGCT...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCAGGCTCGCTGTTGCATTaGTCATTTTCGAGGCCCGTC +
Preference number: 3 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPGSLLH*SFSRPV
Trigger: GACGGGCCTCGAAAATGACAAATGCAACAGCGAGCC...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGCATAGGCCTTGGAGGTaGCTCTTGACTTCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQHRPWR*LLTSLF
Trigger: GAAGAGGGAAGTCAAGAGCAACCTCCAAGGCCTATG...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 72 bp CAAGAAATGAGAGGGTGTGTCCATCTGCTGCCATCTTaGAGGCTTTTGGAAGTGAGACAGGAAACCCAAGCT +
Preference number: 3 (lower is better)
Translates to: QEMRGCVHLLPS*RLLEVRQETQA
Trigger: AGCTTGGGTTTCCTGTCTCACTTCCAAAAGCCTTCAAGATGGCAGCAGATGGACACACCCTCTCATTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 72 bp CAGGAGGACAAGGACGCTGGCTTGCTCACTCAAGCATaGACGCACATTGACATTGATTTAAATGTCCCTATG +
Preference number: 3 (lower is better)
Translates to: QEDKDAGLLTQA*THIDIDLNVPM
Trigger: CATAGGGACATTTAAATCAATGTCAATGTGCGTCCATGCTTGAGTGAGCAAGCCAGCGTCCTTGTCCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCAACAGCACCACAGCCTaGGCTGATGCGAGGATGACC +
Preference number: 3 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGNSTTA*ADARMT
Trigger: GGTCATCCTCGCATCAGCCAAGGCTGTGGTGCTGTT...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 72 bp CTCCTCTCTCACCAGCTCAAGAGAGAACGTAAAGAATaGCTGTCCCGCAGTCCAATGAATGGTGTCAAAACA +
Preference number: 3 (lower is better)
Translates to: LLSHQLKRERKE*LSRSPMNGVKT
Trigger: TGTTTTGACACCATTCATTGGACTGCGGGACAGTCATTCTTTACGTTCTCTCTTGAGCTGGTGAGAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 72 bp CCGTGTGACACTTCTAGGGAATATCTCTTTTGTGCTTaGTCAAAACGAAGAGGCAAATGGTTGGGACTGCTG +
Preference number: 3 (lower is better)
Translates to: PCDTSREYLFCA*SKRRGKWLGLL
Trigger: CAGCAGTCCCAACCATTTGCCTCTTCGTTTTGACCAAGCACAAAAGAGATATTCCCTAGAAGTGTCACACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp TGTACACTGGACTTCCTGGCTCTGTTATCAATAACATaGCAGGAGGACATAAAGTTTGCCTTGTTCCAGGTC +
Preference number: 3 (lower is better)
Translates to: CTLDFLALLSIT*QEDIKFALFQV
Trigger: GACCTGGAACAAGGCAAACTTTATGTCCTCCTGGCATGTTATTGATAACAGAGCCAGGAAGTCCAGTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCAGGTTGTCTTGTCCCTaGGTTTCAAATTTTCGTAGT +
Preference number: 3 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCRLSCP*VSNFRS
Trigger: ACTACGAAAATTTGAAACCAAGGGACAAGACAACCT...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCATCCTTGGTGACTGTTaGCTTTGTGATCTGAAAAGT +
Preference number: 3 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCILGDC*LCDLKS
Trigger: ACTTTTCAGATCACAAAGCAAACAGTCACCAAGGAT...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACTCGGGGGTACATGGGTaGTTCTTACCTGTCCGCATC +
Preference number: 3 (lower is better)
Translates to: TVVIYSILCFYVICQCRYSGVHG*FLPVRI
Trigger: GATGCGGACAGGTAAGAACAACCCATGTACCCCCGA...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAAAGAACTTCCTGTTATTaGATCACAAAAGGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: PYNWITQFPQVLKVGVWERTSCY*ITKGSL
Trigger: GAGGCTGCCTTTTGTGATCAAATAACAGGAAGTTCT...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 72 bp CTTGTCCCTTGGTTTCAAATTTTCGTAGTGCTTCACTaGACAGATGCCTTCACAACATGGAGGTATGCTGCT +
Preference number: 3 (lower is better)
Translates to: LVPWFQIFVVLH*TDAFTTWRYAA
Trigger: AGCAGCATACCTCCATGTTGTGAAGGCATCTGTTCAGTGAAGCACTACGAAAATTTGAAACCAAGGGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 72 bp ACTGCATTGACAAATTTCGACTGTATCATAACAACATaGCATACCAGCCCTCTCACCAAAAGCTCGCCCAGA +
Preference number: 3 (lower is better)
Translates to: TALTNFDCIITT*HTSPLTKSSPR
Trigger: TCTGGGCGAGCTTTTGGTGAGAGGGCTGGTATGTCATGTTGTTATGATACAGTCGAAATTTGTCAATGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 72 bp AGCAGGTGTGCATTCATTCAACTTCCCCATGTGGAGTaGGAACTGGGAAAACCATTCAAATCAACAACATCT +
Preference number: 3 (lower is better)
Translates to: SRCAFIQLPHVE*ELGKPFKSTTS
Trigger: AGATGTTGTTGATTTGAATGGTTTTCCCAGTTCCCACTCCACATGGGGAAGTTGAATGAATGCACACCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 72 bp GGGGGTACATGGGTTGTTCTTACCTGTCCGCATCAATaGGTCATTTCTAACTGTACCAAACTGAAAATTCAC +
Preference number: 3 (lower is better)
Translates to: GGTWVVLTCPHQ*VISNCTKLKIH
Trigger: GTGAATTTTCAGTTTGGTACAGTTAGAAATGACTCATTGATGCGGACAGGTAAGAACAACCCATGTACCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp AAAGAGGAAACTGTCATGAAATGTCAGAGCGTCAGCTaGAGGTTGTCTTGTCCCTTGGTTTCAAATTTTCGT +
Preference number: 3 (lower is better)
Translates to: KEETVMKCQSVS*RLSCPLVSNFR
Trigger: ACGAAAATTTGAAACCAAGGGACAAGACAACCTGCAGCTGACGCTCTGACATTTCATGACAGTTTCCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 72 bp GTTTGCTGGCAGTTTATTTCACAGGAATATATCAGATaGACATCATCTCTCAATGCACTCCCAACTCACAGC +
Preference number: 3 (lower is better)
Translates to: VCWQFISQEYIR*TSSLNALPTHS
Trigger: GCTGTGAGTTGGGAGTGCATTGAGAGATGATGTCCATCTGATATATTCCTGTGAAATAAACTGCCAGCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCACAAAGGGCTCGCTGTaGCATTTGTCATTTTCGAGG +
Preference number: 3 (lower is better)
Translates to: NIFFCHTERVRQSYSGCITKGSL*HLSFSR
Trigger: CCTCGAAAATGACAAATGCAACAGCGAGCCCTTTGT...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp GTAAGAAAAAGCAGTGCCCATGCTTGCTACAAATCACAAGGCTCTCTTAAACATTTGGAAGACAGATCCTaGGTGACTGTTTGCTTTGTG +
Preference number: 3 (lower is better)
Translates to: VRKSSAHACYKSQGSLKHLEDRS*VTVCFV
Trigger: CACAAAGCAAACAGTCACCAAGGATCTGTCTTCCAA...ATGTTTAAGAGAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTTTTTCTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 72 bp TATATGCCCACTGATCTCAACAATGGGGAGCTACTCTaGCTTCAAGACAATAGATATTCCCTAACAGGTCTA +
Preference number: 3 (lower is better)
Translates to: YMPTDLNNGELL*LQDNRYSLTGL
Trigger: TAGACCTGTTAGGGAATATCTATTGTCTTGAAGTCAGAGTAGCTCCCCATTGTTGAGATCAGTGGGCATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR-3UTR CAA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCAAAAACTACTGCTTATTaGAGGCTCAGATTCGTAGTT +
Preference number: 3 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPKTTAY*RLRFVV
Trigger: AACTACGAATCTGAGCCTCAAATAAGCAGTAGTTTT...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 72 bp TGGTTTATTTCAACTAAAGAAAGGTGTCTGGTGAGTTaGAGGAATGACGTGGTGGAATATGGAGCCAATCAT +
Preference number: 3 (lower is better)
Translates to: WFISTKERCLVS*RNDVVEYGANH
Trigger: ATGATTGGCTCCATATTCCACCACGTCATTCCTTCAACTCACCAGACACCTTTCTTTAGTTGAAATAAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 72 bp ATCTGGCATGAAAACAGACTTAGCTTACAGTCACCATaGTCTCCAGGTCATGCTGGTTTATTTCAACTAAAG +
Preference number: 3 (lower is better)
Translates to: IWHENRLSLQSP*SPGHAGLFQLK
Trigger: CTTTAGTTGAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTTCATGCCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp TCTGTTATCAATAACATGCCAGGAGGACATAAAGTTTaGCTTGTTCCAGGTCTTTCTGATATCTTACAGCAC +
Preference number: 3 (lower is better)
Translates to: SVINNMPGGHKV*LVPGLSDILQH
Trigger: GTGCTGTAAGATATCAGAAAGACCTGGAACAAGGCAAACTTTATGTCCTCCTGGCATGTTATTGATAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR TCA 72 bp ACATTATCATTTAAACTGCAACATTGTCAAACACAATaGAACAGAACCAAGCCGTCCTATGCTGTCCAACTG +
Preference number: 3 (lower is better)
Translates to: TLSFKLQHCQTQ*NRTKPSYAVQL
Trigger: CAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTTGACAATGTTGCAGTTTAAATGATAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR GCA 72 bp TCTACCACATTAGTAAGAAAAAGCAGTGCCCATGCTTaGTACAAATCACAAGGCTCTCTTAAACATCATTTG +
Preference number: 3 (lower is better)
Translates to: STTLVRKSSAHA*YKSQGSLKHHL
Trigger: CAAATGATGTTTAAGAGAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTTTTTCTTACTAATGTGGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CCA 72 bp TCGCCACTGGTGTTAACACTAAAGGCTCTGCTAAAATaGACTAAATTACATGAGTCAACATCATGTTTTCTG +
Preference number: 3 (lower is better)
Translates to: SPLVLTLKALLK*TKLHESTSCFL
Trigger: CAGAAAACATGATGTTGACTCATGTAATTTAGTCCATTTTAGCAGAGCCTTTAGTGTTAACACCAGTGGCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CACACTCACAGCTACAGGTACTGTACGTTAAGGACTTGCCAGGGAGGCACCAATCCGCCGGCTGGTCTCTaGCGGCGCTCAGACGCTCCG +
Preference number: 4 (lower is better)
Translates to: HTHSYRYCTLRTCQGGTNPPAGL*RRSDAP
Trigger: CGGAGCGTCTGAGCGCCGGCAGAGACCAGCCGGCGG...ATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAGTACCTGTAGCTGTGAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCACTTAACCCGAGGCCTTaGACCGGCCGTGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPLNPRP*TGRAGG
Trigger: GCCCCCAGCACGGCCGGTGCAAGGCCTCGGGTTAAG...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CCAACACACCCAACGCAAGCTGTGAGGCTGGCCCAGGAGAGAACATTTTCCTCACGTCCGCCGGTACCTTaGGGCGGTCTTCCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: PTHPTQAVRLAQERTFSSRPPVP*GGLPSA
Trigger: TGCGGAAGGAAGACCGCCCCAAGGTACCGGCGGACG...TGAGGAAAATGTTCTCTCCTGGGCCAGCCTCACAGCTTGCGTTGGGTGTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp GTTAAGGACTTGCCAGGGAGGCACCAATGCCTCCTAGGCCAAGACGAGTCAATGCCTTGTCACCGAAGCTaGGGGCCATCAGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: VKDLPGRHQCLLGQDESMPCHRS*GPSAGP
Trigger: CGGACCTGCTGATGGCCCGCAGCTTCGGTGACAAGG...CATTGACTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCCCAGGGAGGCACCAATaGCTCCTAGGCCAAGACGAG +
Preference number: 4 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSPGRHQ*LLGQDE
Trigger: CTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGG...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CCAACACACCCAACGCAAGCTGTGAGGCTGGCCCAGGAGAGAACATTTTCCTCACACCACAGCCTTGGCTaGTGCGAGGATGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: PTHPTQAVRLAQERTFSSHHSLG*CEDDLQ
Trigger: CTGCAGGTCATCCTCGCATCAGCCAAGGCTGTGGTG...TGAGGAAAATGTTCTCTCCTGGGCCAGCCTCACAGCTTGCGTTGGGTGTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAAGAGCCGGCCAGCGGGTaGGGCATGTCGCGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PYNWITQFPQVLKVGVWEEPASG*GMSRRE
Trigger: CTCCCTGCGCGACATGCCGCACCCGCTGGCCGGCTC...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGCCGCCACCCGCCGGCTaGTCTCTGCCGGCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQPPPAG*SLPALR
Trigger: TCTGAGCGCCGGCAGAGACCAGCCGGCGGGTGGCGG...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CCTTCACAACATGGAGGTATGCTGCTCTTGCTGAGAGATATTCTAGCCTCACAGATGTCGCGCAGGGAGTaGGGCCCCGTGGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSQHGGMLLLLRDILASQMSRRE*GPVDGR
Trigger: CCTGCCGTCCACGGGGCCCCACTCCCTGCGCGACAT...CTGTGAGGCTAGAATATCTCTCAGCAAGAGCAGCATACCTCCATGTTGTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAGAGCCCAGAACCACCTaGTGTGGGAGTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPEPRTT*CGSAAA
Trigger: AGCAGCAGCACTCCCACACCAGGTGGTTCTGGGCTC...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp AGCTTGGGGAGCATTCCCCTGAGCTTCCCAAAGGCATaGCAGGAGGACAAGGACGCTGGCTTGCTCACTCAA +
Preference number: 4 (lower is better)
Translates to: SLGSIPLSFPKA*QEDKDAGLLTQ
Trigger: TTGAGTGAGCAAGCCAGCGTCCTTGTCCTCCTGCAATGCCTTTGGGAAGCTCAGGGGAATGCTCCCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp CACTTTCCAGGCCTGGGGCGGCTGCTAGGGAGGGCCTaGTATTCCACTGCCATGTATTCAAGCCTCAAAACC +
Preference number: 4 (lower is better)
Translates to: HFPGLGRLLGRA*YSTAMYSSLKT
Trigger: GGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCCTCCCTAGCAGCCGCCCCAGGCCTGGAAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCAGGCAGCCCATCTTCTaGGAAGAATCACCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSRQPIF*EESPSV
Trigger: CACTGAGGGTGATTCTTCTCAGAAGATGGGCTGCCT...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAGCTGCCGGAAGTCCTaGCTCTTGTTGTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPSCRKS*LLLFCH
Trigger: GTGGCAGAACAACAAGAGGCAGGACTTCCGGCAGCT...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCAAGAATCACCCTCAGTaGAGCCAGCAACCCATCTGG +
Preference number: 4 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSKNHPQ*SQQPIW
Trigger: CCAGATGGGTTGCTGGCTGCACTGAGGGTGATTCTT...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCACACCAGCCTGGAGGCTaGGAAGGAATCCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPHQPGG*EGILSL
Trigger: CAGAGAAAGGATTCCTTCCCAGCCTCCAGGCTGGTG...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCAAACGAAGAGGCAAATaGTTGGGACTGCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSKRRGK*LGLLAL
Trigger: GAGGGCCAGCAGTCCCAACCATTTGCCTCTTCGTTT...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp GTTAAGGACTTGCCAGGGAGGCACCAATGCCTCCTAGGCCAAGACGAGTCAATGCCCATCTGGCCAGACTaGAACCCAGTTCTAACCCAC +
Preference number: 4 (lower is better)
Translates to: VKDLPGRHQCLLGQDESMPIWPD*NPVLTH
Trigger: GTGGGTTAGAACTGGGTTCCAGTCTGGCCAGATGGG...CATTGACTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp CCACACTCACAGCTACAGGTACTGTACGTTAAGGACTaGCCAGGGAGGCACCAATGCCTCCTAGGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: PHSQLQVLYVKD*PGRHQCLLGQD
Trigger: GTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAGTACCTGTAGCTGTGAGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp CTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTaGCAGACTGCCACATGGTCATCGTGCCCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LDVPRAAIPKFH*QTATWSSCPPL
Trigger: TAGAGGAGGGCACGATGACCATGTGGCAGTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCTCGACTCCCACGCCATaGGGCACTTCTCATAATACT +
Preference number: 4 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSSTPTP*GTSHNT
Trigger: AGTATTATGAGAAGTGCCTCATGGCGTGGGAGTCGA...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp GTTAAGGACTTGCCAGGGAGGCACCAATGCCTCCTAGGCCAAGACGAGTCAATGCCAAAGATGAGCATTTaGTGCTGGGCTGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: VKDLPGRHQCLLGQDESMPKMSI*CWAGLV
Trigger: CACCAGACCAGCCCAGCAGCAAATGCTCATCTTTGG...CATTGACTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACAATGGTTGGGACTGCTaGCCCTCAGAGGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: KHNETEPSRPMLSNCGINNGWDC*PSEAQG
Trigger: CCCCTGGGCCTCTGAGGGCCAGCAGTCCCAACCATT...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp GTTAAGGACTTGCCAGGGAGGCACCAATGCCTCCTAGGCCAAGACGAGTCAATGCTACAAGGCAGTCTTTaGCACAGAAGCCTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: VKDLPGRHQCLLGQDESMLQGSL*HRSLRV
Trigger: CACACGGAGGCTTCTGTGCCAAAGACTGCCTTGTAG...CATTGACTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CACACTCACAGCTACAGGTACTGTACGTTAAGGACTTGCCAGGGAGGCACCAATAGTGACGTGCTTGACTaGCTCGCCCATTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: HTHSYRYCTLRTCQGGTNSDVLD*LAHSGQ
Trigger: CTGACCAGAATGGGCGAGTCAGTCAAGCACGTCACT...ATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAGTACCTGTAGCTGTGAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACCCTCCTCCTCATCCTTaGAAAGCAGGCCCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: KHNETEPSRPMLSNCGINPPPHP*KAGPGF
Trigger: GAACCCGGGGCCTGCTTTTCAAGGATGAGGAGGAGG...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCAATCTGGCTGCACACTaGGGAGACTTTAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSNLAAH*GDFSLA
Trigger: AGCTAAGCTAAAGTCTCCTCAGTGTGCAGCCAGATT...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCAACCTGGTCATTGTCTaGAATGCAGCCTGTAACCAC +
Preference number: 4 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSNLVIV*NAACNH
Trigger: GTGGTTACAGGCTGCATTTCAGACAATGACCAGGTT...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp GTTAAGGACTTGCCAGGGAGGCACCAATGCCTCCTAGGCCAAGACGAGTCAATGTTTAACCCGGGCGAATaGAATCTCCCACTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VKDLPGRHQCLLGQDESMFNPGE*NLPLSR
Trigger: CCTGGAAAGTGGGAGATTTCATTCGCCCGGGTTAAA...CATTGACTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CCAACACACCCAACGCAAGCTGTGAGGCTGGCCCAGGAGAGAACATTTTCCTCAAGCTTACAGTCACCATaGTCTCCAGGTCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTHPTQAVRLAQERTFSSSLQSP*SPGHAG
Trigger: ACCAGCATGACCTGGAGATCATGGTGACTGTAAGCT...TGAGGAAAATGTTCTCTCCTGGGCCAGCCTCACAGCTTGCGTTGGGTGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAGAAGGCTTTTGGAAGTaGGACAGGAAACCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPEGFWK*DRKPKL
Trigger: GAGCTTGGGTTTCCTGTCTCACTTCCAAAAGCCTTC...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTTGCATCTGGCTGCCTTCTGTTCCTaGCTCCTCCTCATCCTTGAA +
Preference number: 4 (lower is better)
Translates to: SDLDVLPADQYFQVNLHLAAFCS*LLLILE
Trigger: TTCAAGGATGAGGAGGAGGCAGGAACAGAAGGCAGC...CAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTTGCATCTGGCCAAGACGAGTCAATaGCCACAGAGGCCAATTCCA +
Preference number: 4 (lower is better)
Translates to: SDLDVLPADQYFQVNLHLAKTSQ*PQRPIP
Trigger: TGGAATTGGCCTCTGTGGGCATTGACTCGTCTTGGC...CAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCCAAAGGGCTCGCTGTTaGATTTGTCATTTTCGAGGC +
Preference number: 4 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSQRARC*ICHFRG
Trigger: GCCTCGAAAATGACAAATGCAACAGCGAGCCCTTTG...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACGCTGGGCTGGTCTGGTaGCTTCTGCCAAATATCAGC +
Preference number: 4 (lower is better)
Translates to: HSNSGCSSGCHPKIPLADAGLVW*LLPNIS
Trigger: GCTGATATTTGGCAGAAGGCACCAGACCAGCCCAGC...GTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAAGCCCAAATCCCACGGTaGCTGCCTCCCTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PYNWITQFPQVLKVGVWEAQIPR*LPPFRA
Trigger: GGCTCTGAAGGGAGGCAGGCACCGTGGGATTTGGGC...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACGCAAATGGTTGGGACTaGTGGCCCTCAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KHNETEPSRPMLSNCGINANGWD*WPSEAQ
Trigger: CTGGGCCTCTGAGGGCCAGCAGTCCCAACCATTTGC...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCAGCAGTGCCCATGCTTaGTACAAATCACAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSSSAHA*YKSQGS
Trigger: AGAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCT...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTTGCATCTGTGGCCAAAGCAGGGTTaGCCCAGCCCTATAATTGGA +
Preference number: 4 (lower is better)
Translates to: SDLDVLPADQYFQVNLHLWPKQG*PSPIIG
Trigger: TCCAATTATAGGGCTGGGGCAACCCTGCTTTGGCCA...CAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CCTTCACAACATGGAGGTATGCTGCTCTTGCTGAGAGATATTCTAGCCTCACAGCCAGCACTGCGTCTCTaGCACTGCAGGGACATTCCG +
Preference number: 4 (lower is better)
Translates to: PSQHGGMLLLLRDILASQPALRL*HCRDIP
Trigger: CGGAATGTCCCTGCAGTGCCAGAGACGCAGTGCTGG...CTGTGAGGCTAGAATATCTCTCAGCAAGAGCAGCATACCTCCATGTTGTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTTGCATCTGTCACTCGGGGGTACATaGGTTGTTCTTACCTGTCCG +
Preference number: 4 (lower is better)
Translates to: SDLDVLPADQYFQVNLHLSLGGT*VVLTCP
Trigger: CGGACAGGTAAGAACAACCCATGTACCCCCGAGTGA...CAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACCTAAGCCTGGCTGGGTaGTATGTTCCCTCCCCATTG +
Preference number: 4 (lower is better)
Translates to: HSNSGCSSGCHPKIPLADLSLAG*YVPSPL
Trigger: CAATGGGGAGGGAACATACCACCCAGCCAGGCTTAG...GTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACAGCCAGCAACCCATCTaGCCAGACTGGAACCCAGTT +
Preference number: 4 (lower is better)
Translates to: HSNSGCSSGCHPKIPLADSQQPI*PDWNPV
Trigger: AACTGGGTTCCAGTCTGGCCAGATGGGTTGCTGGCT...GTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp GACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTaGCATCTGAAGCAGCGCCTTAACACAGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: DVLPADQYFQVN*HLKQRLNTAVS
Trigger: TGAAACAGCTGTGTTAAGGCGCTGCTTCAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCTGGGGAGCATTCCCCTaGGCTTCCCAAAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCWGAFP*ASQRHC
Trigger: GCAATGCCTTTGGGAAGCTCAGGGGAATGCTCCCCA...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCGGGATGAGCCACAGATaGAAGAACACAAACATGACA +
Preference number: 4 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSGMSHR*KNTNMT
Trigger: TGTCATGTTTGTGTTCTTTCATCTGTGGCTCATCCC...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACCAGCCTCACAAGAAGTaGGCAGCAGGTGTGCATTCA +
Preference number: 4 (lower is better)
Translates to: HSNSGCSSGCHPKIPLADQPHKK*AAGVHS
Trigger: TGAATGCACACCTGCTGCTCACTTCTTGTGAGGCTG...GTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACCCACGGCCTCCTCGCTaGTGGAGCCGGCCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: TVVIYSILCFYVICQCRYPRPPR*WSRPAG
Trigger: ACCCGCTGGCCGGCTCCAGCAGCGAGGAGGCCGTGG...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCGCCTCTTGTTTCTCCTaGAGTAGTGGAATAATCGAC +
Preference number: 4 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSASCFS*SSGIID
Trigger: GTCGATTATTCCACTACTGCAGGAGAAACAAGAGGC...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CCTTCACAACATGGAGGTATGCTGCTCTTGCTGAGAGATATTCTAGCCTCACAGGAGTCCAGACTGGTATaGCCTGTCCTGACCACAGGC +
Preference number: 4 (lower is better)
Translates to: PSQHGGMLLLLRDILASQESRLV*PVLTTG
Trigger: GCCTGTGGTCAGGACAGGGCATACCAGTCTGGACTC...CTGTGAGGCTAGAATATCTCTCAGCAAGAGCAGCATACCTCCATGTTGTGAAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTTGCATCTGCTGACTCGCCCATTCTaGTCAGCAATGCTATCCCTT +
Preference number: 4 (lower is better)
Translates to: SDLDVLPADQYFQVNLHLLTRPF*SAMLSL
Trigger: AAGGGATAGCATTGCTGACCAGAATGGGCGAGTCAG...CAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCCCACAGCTTCCAGTTTaGCTTCATACTCTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSPQLPV*LHTLLE
Trigger: TTCAAGCAGAGTATGAAGCCAAACTGGAAGCTGTGG...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAGGTGGGGCTGAAATCTaGCATGAAAACAGACTTAGC +
Preference number: 4 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPGGAEI*HENRLS
Trigger: GCTAAGTCTGTTTTCATGCCAGATTTCAGCCCCACC...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CCAACACACCCAACGCAAGCTGTGAGGCTGGCCCAGGAGAGAACATTTTCCTCACTCCACAAACTCTTCTaGAAAACGATCCACAACACC +
Preference number: 4 (lower is better)
Translates to: PTHPTQAVRLAQERTFSSLHKLF*KTIHNT
Trigger: GGTGTTGTGGATCGTTTTTCAGAAGAGTTTGTGGAG...TGAGGAAAATGTTCTCTCCTGGGCCAGCCTCACAGCTTGCGTTGGGTGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CACACTCACAGCTACAGGTACTGTACGTTAAGGACTTGCCAGGGAGGCACCAATTGTCCCGCAGTCCAATaGATGGTGTCAAAACAGAGC +
Preference number: 4 (lower is better)
Translates to: HTHSYRYCTLRTCQGGTNCPAVQ*MVSKQS
Trigger: GCTCTGTTTTGACACCATTCATTGGACTGCGGGACA...ATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAGTACCTGTAGCTGTGAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACGGTCCGGGCTGGGCGTaGTGTCACCACCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: TVVIYSILCFYVICQCRYGPGWA*CHHPRP
Trigger: AGGCCGTGGGTGGTGACAGCACGCCCAGCCCGGACC...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCCATTCTGGTCAGCAATaGTATCCCTTGCTTCTTGTA +
Preference number: 4 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSHSGQQ*YPLLLV
Trigger: TACAAGAAGCAAGGGATAGCATTGCTGACCAGAATG...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CCTTCACAACATGGAGGTATGCTGCTCTTGCTGAGAGATATTCTAGCCTCACAGACAAGGACGCTGGCTTaGTCACTCAAGCATGGACGC +
Preference number: 4 (lower is better)
Translates to: PSQHGGMLLLLRDILASQTRTLA*SLKHGR
Trigger: GCGTCCATGCTTGAGTGAGCAAGCCAGCGTCCTTGT...CTGTGAGGCTAGAATATCTCTCAGCAAGAGCAGCATACCTCCATGTTGTGAAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CCAACACACCCAACGCAAGCTGTGAGGCTGGCCCAGGAGAGAACATTTTCCTCAGTGGAGCTTGGTATATaGCCACTGATCTCAACAATG +
Preference number: 4 (lower is better)
Translates to: PTHPTQAVRLAQERTFSSVELGI*PLISTM
Trigger: CATTGTTGAGATCAGTGGGCATATACCAAGCTCCAC...TGAGGAAAATGTTCTCTCCTGGGCCAGCCTCACAGCTTGCGTTGGGTGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCGAGGGAGTGACCGCGTaGGTCCCACGCCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGEGVTA*VPRPFP
Trigger: TGGGAAGGGGCGTGGGACGCACGCGGTCACTCCCTC...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAGGCCTTGTATTCCACTaGCATGTATTCAAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPGLVFH*HVFKPQ
Trigger: TTGAGGCTTGAATACATGGCAGTGGAATACAAGGCC...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CACTGCATTGACAAATTTCGACTGTATCATAACAACATGACATACCAGCCCTCTTCAGCAGGTCCGGGCTaGGCGTGCTGTCACCACCCA +
Preference number: 4 (lower is better)
Translates to: HCIDKFRLYHNNMTYQPSSAGPG*ACCHHP
Trigger: TGGGTGGTGACAGCACGCCCAGCCCGGACCTGCTGA...AGAGGGCTGGTATGTCATGTTGTTATGATACAGTCGAAATTTGTCAATGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CCTTCACAACATGGAGGTATGCTGCTCTTGCTGAGAGATATTCTAGCCTCACAGCCCATTGAGGAGCAGTaGTTCCTCGCTCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PSQHGGMLLLLRDILASQPIEEQ*FLALSR
Trigger: TCTGCTCAGAGCGAGGAACCACTGCTCCTCAATGGG...CTGTGAGGCTAGAATATCTCTCAGCAAGAGCAGCATACCTCCATGTTGTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTTGCATCTGCCGCAGTCCAATGAATaGTGTCAAAACAGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: SDLDVLPADQYFQVNLHLPQSNE*CQNRAQ
Trigger: TTGGGCTCTGTTTTGACACCATTCATTGGACTGCGG...CAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp TTCCCAAAGGCATTGCAGGAGGACAAGGACGCTGGCTaGCTCACTCAAGCATGGACGCACATTGACATTGAT +
Preference number: 4 (lower is better)
Translates to: FPKALQEDKDAG*LTQAWTHIDID
Trigger: ATCAATGTCAATGTGCGTCCATGCTTGAGTGAGCAAGCCAGCGTCCTTGTCCTCCTGCAATGCCTTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp TCCCCAAAGCCAACCCTAGTGATGGCCCTCACTTTCTaGCTTGTTTCTTTAGGGGGCCTGAGGACTGACTAT +
Preference number: 4 (lower is better)
Translates to: SPKPTLVMALTF*LVSLGGLRTDY
Trigger: ATAGTCAGTCCTCAGGCCCCCTAAAGAAACAAGCAAGAAAGTGAGGGCCATCACTAGGGTTGGCTTTGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCAGTTCCCAATGCAAGCTaGCACACCCTCCAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPVPNAS*HTLQGF
Trigger: GAACCCCTGGAGGGTGTGTCAGCTTGCATTGGGAAC...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACAGAGAACGTAAAGAATaGCTGTCCCGCAGTCCAATG +
Preference number: 4 (lower is better)
Translates to: HSNSGCSSGCHPKIPLADRERKE*LSRSPM
Trigger: CATTGGACTGCGGGACAGTCATTCTTTACGTTCTCT...GTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CCAACACACCCAACGCAAGCTGTGAGGCTGGCCCAGGAGAGAACATTTTCCTCATTTGGCTTCATACTCTaGTTGAACTTGGTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: PTHPTQAVRLAQERTFSSFGFIL*LNLVPL
Trigger: AAGAGGGACCAAGTTCAAGCAGAGTATGAAGCCAAA...TGAGGAAAATGTTCTCTCCTGGGCCAGCCTCACAGCTTGCGTTGGGTGTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTTGCATCTGGCTTCACTGAACAGATaGCTTCACAACATGGAGGTA +
Preference number: 4 (lower is better)
Translates to: SDLDVLPADQYFQVNLHLASLNR*LHNMEV
Trigger: TACCTCCATGTTGTGAAGGCATCTGTTCAGTGAAGC...CAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAAGTGACCTTGACGTGCTaGCCGCTGACCAGTATTTCC +
Preference number: 4 (lower is better)
Translates to: PYNWITQFPQVLKVGVWEVTLTC*PLTSIS
Trigger: GGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCAC...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CCTTCACAACATGGAGGTATGCTGCTCTTGCTGAGAGATATTCTAGCCTCACAGAAGATGAGCATTTGCTaGTGGGCTGGTCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PSQHGGMLLLLRDILASQKMSIC*WAGLVP
Trigger: AGGCACCAGACCAGCCCAGCAGCAAATGCTCATCTT...CTGTGAGGCTAGAATATCTCTCAGCAAGAGCAGCATACCTCCATGTTGTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACACTGGGGGTGGAGCTTaGTATATGCCCACTGATCTC +
Preference number: 4 (lower is better)
Translates to: KHNETEPSRPMLSNCGINTGGGA*YMPTDL
Trigger: GAGATCAGTGGGCATATACCAAGCTCCACCCCCAGT...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAAGCTGCTGGGCTGGTCTaGTGCCTTCTGCCAAATATC +
Preference number: 4 (lower is better)
Translates to: PYNWITQFPQVLKVGVWEAAGLV*CLLPNI
Trigger: GATATTTGGCAGAAGGCACCAGACCAGCCCAGCAGC...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAAAATGCTAAGCCTGGCTaGGTGGTATGTTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PYNWITQFPQVLKVGVWENAKPG*VVCSLP
Trigger: GGGGAGGGAACATACCACCCAGCCAGGCTTAGCATT...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp GAGGGAAAAATACACAAAGGAGAGATGTTTCTGTGGTaGTTTTCCCAGCACTGCGTCTCTGGCACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EGKIHKGEMFLW*FSQHCVSGTAG
Trigger: CCCTGCAGTGCCAGAGACGCAGTGCTGGGAAAACAACCACAGAAACATCTCTCCTTTGTGTATTTTTCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAACACCGTTGGGCAAAATaGGATCCTTGTCACCGAAGC +
Preference number: 4 (lower is better)
Translates to: PYNWITQFPQVLKVGVWEHRWAK*DPCHRS
Trigger: GCTTCGGTGACAAGGATCTCATTTTGCCCAACGGTG...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAGTAGGTATTTTTGGTaGGGTAAAGGCAAATTGCAC +
Preference number: 4 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPSRYFW*GKGKLH
Trigger: GTGCAATTTGCCTTTACCTCACCAAAAATACCTACT...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CACACTCACAGCTACAGGTACTGTACGTTAAGGACTTGCCAGGGAGGCACCAATCATTGTCAAACACAATaGAACAGAACCAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: HTHSYRYCTLRTCQGGTNHCQTQ*NRTKPS
Trigger: GGACGGCTTGGTTCTGTTTCATTGTGTTTGACAATG...ATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAGTACCTGTAGCTGTGAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACCTATGTTCCCAAAGATaGGCATTTGCTGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KHNETEPSRPMLSNCGINLCSQR*AFAAGL
Trigger: CAGCCCAGCAGCAAATGCTCATCTTTGGGAACATAG...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp GTAAGAAAAAGCAGTGCCCATGCTTGCTACAAATCACAAGGCTCTCTTAAACATAGCCTCCTCACCTCATaGGACACCAGCCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VRKSSAHACYKSQGSLKHSLLTS*DTSLEA
Trigger: AGCCTCCAGGCTGGTGTCTCATGAGGTGAGGAGGCT...ATGTTTAAGAGAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTTTTTCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGAGTGGTTCCTCGCTCTaGGCAGAACAGCCTAGAATG +
Preference number: 4 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQSGSSL*AEQPRM
Trigger: CATTCTAGGCTGTTCTGCTCAGAGCGAGGAACCACT...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CCTTCACAACATGGAGGTATGCTGCTCTTGCTGAGAGATATTCTAGCCTCACAGGGTGAGTTGAAGGAATaGCGTGGTGGAATATGGAGC +
Preference number: 4 (lower is better)
Translates to: PSQHGGMLLLLRDILASQGELKE*RGGIWS
Trigger: GCTCCATATTCCACCACGTCATTCCTTCAACTCACC...CTGTGAGGCTAGAATATCTCTCAGCAAGAGCAGCATACCTCCATGTTGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCAGGTGTCTGGTGAGTTaGAGGAATGACGTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCRCLVS*RNDVVE
Trigger: TTCCACCACGTCATTCCTTCAACTCACCAGACACCT...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CCAACACACCCAACGCAAGCTGTGAGGCTGGCCCAGGAGAGAACATTTTCCTCAAGTTTGGTAGCTTCATaGAACAAAGACTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: PTHPTQAVRLAQERTFSSSLVAS*NKDFHL
Trigger: CAGATGGAAGTCTTTGTTTCATGAAGCTACCAAACT...TGAGGAAAATGTTCTCTCCTGGGCCAGCCTCACAGCTTGCGTTGGGTGTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AAGCCTCCGTGTGACACTTCTAGGGAATATCTCTTTTGTGCTTGGTCAAAACGAATCCCCATGAGTAGCTaGCGGAAGTCCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: KPPCDTSREYLFCAWSKRIPMSS*RKSCLL
Trigger: CAAGAGGCAGGACTTCCGGCAGCTACTCATGGGGAT...TCGTTTTGACCAAGCACAAAAGAGATATTCCCTAGAAGTGTCACACGGAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGTGTACGTTAAGGACTTaGCAGGGAGGCACCAATGCC +
Preference number: 4 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQCTLRT*QGGTNA
Trigger: GGCATTGGTGCCTCCCTGGCAAGTCCTTAACGTACA...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AAGCCTCCGTGTGACACTTCTAGGGAATATCTCTTTTGTGCTTGGTCAAAACGAGCTTCCCAAAGGCATTaGAGGAGGACAAGGACGCTG +
Preference number: 4 (lower is better)
Translates to: KPPCDTSREYLFCAWSKRASQRH*RRTRTL
Trigger: CAGCGTCCTTGTCCTCCTGCAATGCCTTTGGGAAGC...TCGTTTTGACCAAGCACAAAAGAGATATTCCCTAGAAGTGTCACACGGAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGTGGTCTGGTGCCTTCTaGCAAATATCAGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQWSGAF*QISAEG
Trigger: GCCCTCTGCTGATATTTGGCAGAAGGCACCAGACCA...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCGGTGTGTCCATCTGCTaGCATCTTGAAGGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCGVSIC*HLEGFW
Trigger: CCAAAAGCCTTCAAGATGGCAGCAGATGGACACACC...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACGAGGGTGTGTCCATCTaGTGCCATCTTGAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KHNETEPSRPMLSNCGINEGVSI*CHLEGF
Trigger: AAAGCCTTCAAGATGGCAGCAGATGGACACACCCTC...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCAGTCCAACAGGGGTGTTaGTGGGTGTCACCTACTAGG +
Preference number: 4 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPVQQGC*WVSPTR
Trigger: CCTAGTAGGTGACACCCAGCAACACCCCTGTTGGAC...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CCTTCACAACATGGAGGTATGCTGCTCTTGCTGAGAGATATTCTAGCCTCACAGCTTCCCCATGTGGAGTaGGAACTGGGAAAACCATTC +
Preference number: 4 (lower is better)
Translates to: PSQHGGMLLLLRDILASQLPHVE*ELGKPF
Trigger: GAATGGTTTTCCCAGTTCCCACTCCACATGGGGAAG...CTGTGAGGCTAGAATATCTCTCAGCAAGAGCAGCATACCTCCATGTTGTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AAGCCTCCGTGTGACACTTCTAGGGAATATCTCTTTTGTGCTTGGTCAAAACGACAACAGGGGTGTTGCTaGGTGTCACCTACTAGGACC +
Preference number: 4 (lower is better)
Translates to: KPPCDTSREYLFCAWSKRQQGCC*VSPTRT
Trigger: GGTCCTAGTAGGTGACACCCAGCAACACCCCTGTTG...TCGTTTTGACCAAGCACAAAAGAGATATTCCCTAGAAGTGTCACACGGAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp GAACAGATGCCTTCACAACATGGAGGTATGCTGCTCTaGCTGAGAGATATTCTAGCCTCACAGACTCCACCA +
Preference number: 4 (lower is better)
Translates to: EQMPSQHGGMLL*LRDILASQTPP
Trigger: TGGTGGAGTCTGTGAGGCTAGAATATCTCTCAGCAAGAGCAGCATACCTCCATGTTGTGAAGGCATCTGTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp ACAAGAAATGAGAGGGTGTGTCCATCTGCTGCCATCTaGAAGGCTTTTGGAAGTGAGACAGGAAACCCAAGC +
Preference number: 4 (lower is better)
Translates to: TRNERVCPSAAI*KAFGSETGNPS
Trigger: GCTTGGGTTTCCTGTCTCACTTCCAAAAGCCTTCAAGATGGCAGCAGATGGACACACCCTCTCATTTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCCACTCCATCCGATCCTaGCATTTCTCGACGTCCGCC +
Preference number: 4 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFHSIRS*HFSTSA
Trigger: GGCGGACGTCGAGAAATGTCAGGATCGGATGGAGTG...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACCATCTGCTGCCATCTTaGAGGCTTTTGGAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: KHNETEPSRPMLSNCGINHLLPS*RLLEVR
Trigger: TCTCACTTCCAAAAGCCTTCAAGATGGCAGCAGATG...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCACCCAACGCAAGCTGTaGGGCTGGCCCAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGTQRKL*GWPRRE
Trigger: TTCTCTCCTGGGCCAGCCTCACAGCTTGCGTTGGGT...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AAGCCTCCGTGTGACACTTCTAGGGAATATCTCTTTTGTGCTTGGTCAAAACGACCCAACTCACAGCAATaGAGGGAACAGGCACACAGA +
Preference number: 4 (lower is better)
Translates to: KPPCDTSREYLFCAWSKRPNSQQ*REQAHR
Trigger: TCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGG...TCGTTTTGACCAAGCACAAAAGAGATATTCCCTAGAAGTGTCACACGGAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp GTTAAGGACTTGCCAGGGAGGCACCAATGCCTCCTAGGCCAAGACGAGTCAATGGTAGAACATTCACACTaGATTGACAAATTTCGACTG +
Preference number: 4 (lower is better)
Translates to: VKDLPGRHQCLLGQDESMVEHSH*IDKFRL
Trigger: CAGTCGAAATTTGTCAATGCAGTGTGAATGTTCTAC...CATTGACTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CACACTCACAGCTACAGGTACTGTACGTTAAGGACTTGCCAGGGAGGCACCAATTCTTTGATGATCCGCTaGGCTATTCGATCAATGGTT +
Preference number: 4 (lower is better)
Translates to: HTHSYRYCTLRTCQGGTNSLMIR*AIRSMV
Trigger: AACCATTGATCGAATAGCCCAGCGGATCATCAAAGA...ATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAGTACCTGTAGCTGTGAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp GTTAAGGACTTGCCAGGGAGGCACCAATGCCTCCTAGGCCAAGACGAGTCAATGCAGGAATATATCAGATaGACATCATCTCTCAATGCA +
Preference number: 4 (lower is better)
Translates to: VKDLPGRHQCLLGQDESMQEYIR*TSSLNA
Trigger: TGCATTGAGAGATGATGTCCATCTGATATATTCCTG...CATTGACTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCTGTCAGCCATCCCCATaGGTAGCTGCCGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: NIFFCHTERVRQSYSGCICQPSP*VAAGSP
Trigger: AGGACTTCCGGCAGCTACTCATGGGGATGGCTGACA...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGTTGGTATATGCCCACTaGTCTCAACAATGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQLVYAH*SQQWGA
Trigger: AGCTCCCCATTGTTGAGATCAGTGGGCATATACCAA...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCTACAGGGTGGGTTGGTaGAAAAATGGATTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCYRVGW*KNGFLV
Trigger: AACCAGGAATCCATTTTTTCACCAACCCACCCTGTA...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CACACTCACAGCTACAGGTACTGTACGTTAAGGACTTGCCAGGGAGGCACCAATAGTAGAGTTGGGCTTTaGAAAGTCTGTGGCATTTTT +
Preference number: 4 (lower is better)
Translates to: HTHSYRYCTLRTCQGGTNSRVGL*KVCGIF
Trigger: AAAAATGCCACAGACTTTTCAAAGCCCAACTCTACT...ATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAGTACCTGTAGCTGTGAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CACACTCACAGCTACAGGTACTGTACGTTAAGGACTTGCCAGGGAGGCACCAATGGAATATCTCTTTTGTaGTTGGTCAAAACGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HTHSYRYCTLRTCQGGTNGISLL*LVKTKR
Trigger: CCTCTTCGTTTTGACCAAGCACAAAAGAGATATTCC...ATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAGTACCTGTAGCTGTGAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CCTTCACAACATGGAGGTATGCTGCTCTTGCTGAGAGATATTCTAGCCTCACAGTGCGTCTCTAAAATCTaGTCAGTTCCTAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: PSQHGGMLLLLRDILASQCVSKI*SVPRTP
Trigger: AGGAGTCCTAGGAACTGAGCAGATTTTAGAGACGCA...CTGTGAGGCTAGAATATCTCTCAGCAAGAGCAGCATACCTCCATGTTGTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAAAGTGAGCAGCAGGTGTaGATTCATTCAACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PYNWITQFPQVLKVGVWESEQQV*IHSTSP
Trigger: TGGGGAAGTTGAATGAATGCACACCTGCTGCTCACT...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTTGCATCTGCTTCAAAAGCTGTTCTaGAGAATCAGGAGTAACATT +
Preference number: 4 (lower is better)
Translates to: SDLDVLPADQYFQVNLHLLQKLF*RIRSNI
Trigger: AATGTTACTCCTGATTCTGCAGAACAGCTTTTGAAG...CAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCCCAAGGCGCTCCATGTaGAGTACACAGGCCCGTATT +
Preference number: 4 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFPRRSM*STQARI
Trigger: AATACGGGCCTGTGTACTCCACATGGAGCGCCTTGG...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAAGATGCCTTCACAACATaGAGGTATGCTGCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: PYNWITQFPQVLKVGVWEDAFTT*RYAALA
Trigger: AGCAAGAGCAGCATACCTCCATGTTGTGAAGGCATC...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp GTAAGAAAAAGCAGTGCCCATGCTTGCTACAAATCACAAGGCTCTCTTAAACATCAGTCCCCAGGAATCTaGCTGCACACTGAGGAGACT +
Preference number: 4 (lower is better)
Translates to: VRKSSAHACYKSQGSLKHQSPGI*LHTEET
Trigger: AGTCTCCTCAGTGTGCAGCCAGATTCCTGGGGACTG...ATGTTTAAGAGAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTTTTTCTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CACACTCACAGCTACAGGTACTGTACGTTAAGGACTTGCCAGGGAGGCACCAATATCTGTAATGTACACTaGACTTCCTGGCTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: HTHSYRYCTLRTCQGGTNICNVH*TSWLCY
Trigger: ATAACAGAGCCAGGAAGTCCAGTGTACATTACAGAT...ATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAGTACCTGTAGCTGTGAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTTGCATCTGTATCTCTTTTGTGCTTaGTCAAAACGAAGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SDLDVLPADQYFQVNLHLYLFCA*SKRRGK
Trigger: TTTGCCTCTTCGTTTTGACCAAGCACAAAAGAGATA...CAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCACCCCAGCCCTATAATTaGATCACCCAGTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPPQPYN*ITQFPQ
Trigger: CTGTGGAAACTGGGTGATCCAATTATAGGGCTGGGG...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp TTTCCAATCTGTTGCATTCTAGTGTCAGAAACAAGCTaGGGGAGCATTCCCCTGAGCTTCCCAAAGGCATTG +
Preference number: 4 (lower is better)
Translates to: FPICCILVSETS*GSIPLSFPKAL
Trigger: CAATGCCTTTGGGAAGCTCAGGGGAATGCTCCCCAAGCTTGTTTCTGACACTAGAATGCAACAGATTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp AGGCCAAAAGCGCCTTTAAGAGATGCTGGTTTGTTATaGGATAAAGGCCGAGATGACAGAGCCACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RPKAPLRDAGLL*DKGRDDRATAS
Trigger: TGAAGCAGTGGCTCTGTCATCTCGGCCTTTATCCAATAACAAACCAGCATCTCTTAAAGGCGCTTTTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp GTGTCTAGGCCAAAAGCGCCTTTAAGAGATGCTGGTTaGTTATTGGATAAAGGCCGAGATGACAGAGCCACT +
Preference number: 4 (lower is better)
Translates to: VSRPKAPLRDAG*LLDKGRDDRAT
Trigger: AGTGGCTCTGTCATCTCGGCCTTTATCCAATAACAAACCAGCATCTCTTAAAGGCGCTTTTGGCCTAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGCAAGCTGAAGTCTGTTaGGAAGGGAAGATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQQAEVC*EGKMKK
Trigger: CTTCTTCATCTTCCCTTCTCAACAGACTTCAGCTTG...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGAAGAGGAAACTGTCATaGAATGTCAGAGCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQKRKLS*NVRASA
Trigger: AGCTGACGCTCTGACATTTCATGACAGTTTCCTCTT...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACGGCCCGTCCAGGTACTaGTTTTCCTTCCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: TVVIYSILCFYVICQCRYGPSRY*FSFLTR
Trigger: CCTGGTCAGGAAGGAAAATCAGTACCTGGACGGGCC...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CACACTCACAGCTACAGGTACTGTACGTTAAGGACTTGCCAGGGAGGCACCAATGAAAGAACACAAACATaGCATGTAGCTTCATTTCAG +
Preference number: 4 (lower is better)
Translates to: HTHSYRYCTLRTCQGGTNERTQT*HVASFQ
Trigger: CTGAAATGAAGCTACATGTCATGTTTGTGTTCTTTC...ATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAGTACCTGTAGCTGTGAGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAAACCTGTCCGCATCAATaGGTCATTTCTAACTGTACC +
Preference number: 4 (lower is better)
Translates to: PYNWITQFPQVLKVGVWETCPHQ*VISNCT
Trigger: GGTACAGTTAGAAATGACTCATTGATGCGGACAGGT...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCTTAAGAGAGGAGTACTaGTCTCAGGGCCACAATTTT +
Preference number: 4 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCLREEY*SQGHNF
Trigger: AAAATTGTGGCCCTGAGATCAGTACTCCTCTCTTAA...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAATTTCCTCAAATTTACTaGTACAGGCCTCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: PYNWITQFPQVLKVGVWEFPQIY*YRPPAI
Trigger: GATGGCAGGAGGCCTGTATCAGTAAATTTGAGGAAA...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACTCTCAAACAAAAAGCTaGCAATCTACAGGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: KHNETEPSRPMLSNCGINSQTKS*QSTGWV
Trigger: AACCCACCCTGTAGATTGTCAGCTTTTTGTTTGAGA...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CACTGCATTGACAAATTTCGACTGTATCATAACAACATGACATACCAGCCCTCTCCTATGCTGTCCAACTaGGGCATCAACAGCACCACA +
Preference number: 4 (lower is better)
Translates to: HCIDKFRLYHNNMTYQPSPMLSN*GINSTT
Trigger: TGTGGTGCTGTTGATGCCGCAGTTGGACAGCATAGG...AGAGGGCTGGTATGTCATGTTGTTATGATACAGTCGAAATTTGTCAATGCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCTCAGAGCCAGCCATCTaGCTCTCACTAGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGSEPAI*LSLGEG
Trigger: TCCCTCTCCTAGTGAGAGGCAGATGGCTGGCTCTGA...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACAAAAAGCAGTGCCCATaGTTGCTACAAATCACAAGG +
Preference number: 4 (lower is better)
Translates to: KHNETEPSRPMLSNCGINKKQCP*LLQITR
Trigger: CCTTGTGATTTGTAGCAAGCATGGGCACTGCTTTTT...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCTGGACAAAAACCTCGTaGCAGCATCAAAAAGTCAAC +
Preference number: 4 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCWTKTS*QHQKVN
Trigger: GTTGACTTTTTGATGCTGGCACGAGGTTTTTGTCCA...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCATGAGCATTTGCTGCTaGGCTGGTCTGGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFMSICC*AGLVPS
Trigger: AGAAGGCACCAGACCAGCCCAGCAGCAAATGCTCAT...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCTTGCAGACTGCCACATaGTCATCGTGCCCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFLQTAT*SSCPPL
Trigger: TAGAGGAGGGCACGATGACCATGTGGCAGTCTGCAA...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCACTTAAAGTAGGTGTCTaGGAAGGTGGAGTCCAGACT +
Preference number: 4 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPLKVGV*EGGVQT
Trigger: AGTCTGGACTCCACCTTCCCAGACACCTACTTTAAG...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACTCACAGCTTTTGTTTTaGCATAATGGCAGCATGGAG +
Preference number: 4 (lower is better)
Translates to: KHNETEPSRPMLSNCGINSQLLF*HNGSME
Trigger: CTCCATGCTGCCATTATGCCAAAACAAAAGCTGTGA...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACAATGGGGAGCTACTCTaGCTTCAAGACAATAGATAT +
Preference number: 4 (lower is better)
Translates to: KHNETEPSRPMLSNCGINNGELL*LQDNRY
Trigger: ATATCTATTGTCTTGAAGTCAGAGTAGCTCCCCATT...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCTGGCTGATGCGAGGATaGCCTGCAGTTAAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGWLMRG*PAVKSG
Trigger: CCCACTTTTAACTGCAGGTCATCCTCGCATCAGCCA...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCTGGGAGTGCTGCTGCTaGCAGAGAATATGCAATGCT +
Preference number: 4 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFWECCC*QRICNA
Trigger: AGCATTGCATATTCTCTGTCAGCAGCAGCACTCCCA...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCAGTAACATTTCTGACTaGAGTGTTGGTCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCSNISD*SVGLRL
Trigger: CAGTCTTAGACCAACACTTCAGTCAGAAATGTTACT...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACTCCATTGTACACACATaGTTCTTGGGATCATCAACT +
Preference number: 4 (lower is better)
Translates to: KHNETEPSRPMLSNCGINSIVHT*FLGSST
Trigger: AGTTGATGATCCCAAGAAGCATGTGTGTACAATGGA...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCTGCCTCTTGTTGTTCTaGCACCTCTCCATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFCLLLF*HLSMSA
Trigger: AGCTGACATGGAGAGGTGGCAGAACAACAAGAGGCA...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACTTGTTTTCCCAGCACTaGGTCTCTGGCACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TVVIYSILCFYVICQCRYLFSQH*VSGTAG
Trigger: CCCTGCAGTGCCAGAGACGCAGTGCTGGGAAAACAA...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCTGTCAGAGCGTCAGCTaGAGGTTGTCTTGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGCQSVS*RLSCPL
Trigger: CAAGGGACAAGACAACCTGCAGCTGACGCTCTGACA...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAAAACAGGTCTAATCCCTaGTCTGATGACAGTGAACAA +
Preference number: 4 (lower is better)
Translates to: PYNWITQFPQVLKVGVWENRSNP*SDDSEQ
Trigger: TTGTTCACTGTCATCAGAGCAGGGATTAGACCTGTT...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCAACCAAGCCGTCCTATaGTGTCCAACTGCGGCATCA +
Preference number: 4 (lower is better)
Translates to: NIFFCHTERVRQSYSGCINQAVL*CPTAAS
Trigger: TGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTT...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp CACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACCTGTTATCAATAACATaGCAGGAGGACATAAAGTTT +
Preference number: 4 (lower is better)
Translates to: HSNSGCSSGCHPKIPLADLLSIT*QEDIKF
Trigger: AAACTTTATGTCCTCCTGGCATGTTATTGATAACAG...GTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCGCCACATGGTCATCGTaGCCTCCTCTAAAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGATWSS*PPLKQN
Trigger: GTTCTGCTTTAGAGGAGGGCACGATGACCATGTGGC...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCCTGATACAGGCCTCCTaGCATCTGACAGACAAGACA +
Preference number: 4 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFLIQAS*HLTDKT
Trigger: TGTCTTGTCTGTCAGATGGCAGGAGGCCTGTATCAG...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACAACCAGTCAAAATCCTaGTATCTTCGACGAACAGAA +
Preference number: 4 (lower is better)
Translates to: KHNETEPSRPMLSNCGINNQSKS*YLRRTE
Trigger: TTCTGTTCGTCGAAGATACCAGGATTTTGACTGGTT...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACCATTTGCTGCTGGGCTaGTCTGGTGCCTTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: TVVIYSILCFYVICQCRYHLLLG*SGAFCQ
Trigger: TTGGCAGAAGGCACCAGACCAGCCCAGCAGCAAATG...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACATCTCCAGGTCATGCTaGTTTATTTCAACTAAAGAA +
Preference number: 4 (lower is better)
Translates to: HSNSGCSSGCHPKIPLADISRSC*FISTKE
Trigger: TTCTTTAGTTGAAATAAACCAGCATGACCTGGAGAT...GTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp AAATGTCAGAGCGTCAGCTGCAGGTTGTCTTGTCCCTaGGTTTCAAATTTTCGTAGTGCTTCACTGAACAGA +
Preference number: 4 (lower is better)
Translates to: KCQSVSCRLSCP*VSNFRSASLNR
Trigger: TCTGTTCAGTGAAGCACTACGAAAATTTGAAACCAAGGGACAAGACAACCTGCAGCTGACGCTCTGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp GAAACTGTCATGAAATGTCAGAGCGTCAGCTGCAGGTaGTCTTGTCCCTTGGTTTCAAATTTTCGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: ETVMKCQSVSCR*SCPLVSNFRSA
Trigger: AGCACTACGAAAATTTGAAACCAAGGGACAAGACAACCTGCAGCTGACGCTCTGACATTTCATGACAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACCAAATTGCACAAAGCTaGCACTGGGGGTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TVVIYSILCFYVICQCRYQIAQS*HWGWSL
Trigger: CAAGCTCCACCCCCAGTGTCAGCTTTGTGCAATTTG...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCATTGCTCACTCAAGCATaGACGCACATTGACATTGAT +
Preference number: 4 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPLLTQA*THIDID
Trigger: ATCAATGTCAATGTGCGTCCATGCTTGAGTGAGCAA...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp CACTGCATTGACAAATTTCGACTGTATCATAACAACATGACATACCAGCCCTCTTTCAACTTCCCCATGTaGAGTGGGAACTGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: HCIDKFRLYHNNMTYQPSFNFPM*SGNWEN
Trigger: GTTTTCCCAGTTCCCACTCCACATGGGGAAGTTGAA...AGAGGGCTGGTATGTCATGTTGTTATGATACAGTCGAAATTTGTCAATGCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGGTAACATTTACACGGTaGACTACATCAATACCTCAG +
Preference number: 4 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQVTFTR*TTSIPQ
Trigger: CTGAGGTATTGATGTAGTCCACCGTGTAAATGTTAC...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCACAATGGTTCCCAGTTTaGGTGCAAATGTATCTAAGT +
Preference number: 4 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPQWFPV*VQMYLS
Trigger: ACTTAGATACATTTGCACTCAAACTGGGAACCATTG...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCCTTTCAGGTCAGCATTaGAACACTCCATCCGATCCT +
Preference number: 4 (lower is better)
Translates to: NIFFCHTERVRQSYSGCILSGQH*NTPSDP
Trigger: AGGATCGGATGGAGTGTTTCAATGCTGACCTGAAAG...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCTTCGTAGTGCTTCACTaGACAGATGCCTTCACAACA +
Preference number: 4 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFFVVLH*TDAFTT
Trigger: TGTTGTGAAGGCATCTGTTCAGTGAAGCACTACGAA...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp GTAAGAAAAAGCAGTGCCCATGCTTGCTACAAATCACAAGGCTCTCTTAAACATTGTATCATAACAACATaGCATACCAGCCCTCTCACC +
Preference number: 4 (lower is better)
Translates to: VRKSSAHACYKSQGSLKHCIITT*HTSPLT
Trigger: GGTGAGAGGGCTGGTATGTCATGTTGTTATGATACA...ATGTTTAAGAGAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTTTTTCTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCACAAGACACAAGAAATaGGAGGGTGTGTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGTRHKK*EGVSIC
Trigger: GCAGATGGACACACCCTCTCATTTCTTGTGTCTTGT...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACGGATGTTCCTCGGGCTaGCATCCCAAAATTCCACTT +
Preference number: 4 (lower is better)
Translates to: TVVIYSILCFYVICQCRYGCSSG*HPKIPL
Trigger: AAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCC...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp GTAAGAAAAAGCAGTGCCCATGCTTGCTACAAATCACAAGGCTCTCTTAAACATACAGAGAATATGCAATaGTCCTCGCCACTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: VRKSSAHACYKSQGSLKHTENMQ*SSPLVL
Trigger: TAACACCAGTGGCGAGGAGCATTGCATATTCTCTGT...ATGTTTAAGAGAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTTTTTCTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCCCCACGTCAACACGATaGCTTAGAGGTAGAATAAAG +
Preference number: 4 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFPTSTR*LRGRIK
Trigger: CTTTATTCTACCTCTAAGCCATCGTGTTGACGTGGG...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp GTAAGAAAAAGCAGTGCCCATGCTTGCTACAAATCACAAGGCTCTCTTAAACATGAAGGAATGACGTGGTaGAATATGGAGCCAATCATC +
Preference number: 4 (lower is better)
Translates to: VRKSSAHACYKSQGSLKHEGMTW*NMEPII
Trigger: GATGATTGGCTCCATATTCCACCACGTCATTCCTTC...ATGTTTAAGAGAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTTTTTCTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
3UTR CAA 72 bp TTATCAATAACATGCCAGGAGGACATAAAGTTTGCCTaGTTCCAGGTCTTTCTGATATCTTACAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: LSITCQEDIKFA*FQVFLISYSTG
Trigger: CCCTGTGCTGTAAGATATCAGAAAGACCTGGAACAAGGCAAACTTTATGTCCTCCTGGCATGTTATTGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCAATAAAATATATTCCCTaGGCACAGGTAGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPIKYIP*AQVGSL
Trigger: AAGACTTCCTACCTGTGCTCAGGGAATATATTTTAT...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CACTGCATTGACAAATTTCGACTGTATCATAACAACATGACATACCAGCCCTCTGAACTTCCTGTTATTTaGTCACAAAAGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: HCIDKFRLYHNNMTYQPSELPVI*SQKAAS
Trigger: TGAGGCTGCCTTTTGTGATCAAATAACAGGAAGTTC...AGAGGGCTGGTATGTCATGTTGTTATGATACAGTCGAAATTTGTCAATGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCGGCATAATGGCAGCATaGAGAGAAGGTAACATTTAC +
Preference number: 4 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFGIMAA*REGNIY
Trigger: GTAAATGTTACCTTCTCTCCATGCTGCCATTATGCC...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCATATCATCATCAAGCTaGAGTCTGTTGAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFISSSS*SLLRRE
Trigger: TTCCCTTCTCAACAGACTTCAGCTTGATGATGATAT...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCGGAGGACATAAAGTTTaGCTTGTTCCAGGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: NIFFCHTERVRQSYSGCIGGHKV*LVPGLS
Trigger: AGAAAGACCTGGAACAAGGCAAACTTTATGTCCTCC...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACTCCCAAAATTCCACTTaGAGACTGCCACATGGTCAT +
Preference number: 4 (lower is better)
Translates to: TVVIYSILCFYVICQCRYSQNST*RLPHGH
Trigger: ATGACCATGTGGCAGTCTGCAAGTGGAATTTTGGGA...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCAATGTTTCTGGGTTTTaGCAACTAGCAGATAGTCAG +
Preference number: 4 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFNVSGF*QLADSQ
Trigger: CTGACTATCTGCTAGTTGCCAAAACCCAGAAACATT...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp GTAAGAAAAAGCAGTGCCCATGCTTGCTACAAATCACAAGGCTCTCTTAAACATCTAACTGTACCAAACTaGAAATTCACATCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: VRKSSAHACYKSQGSLKHLTVPN*KFTSKD
Trigger: GTCCTTTGATGTGAATTTTCAGTTTGGTACAGTTAG...ATGTTTAAGAGAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTTTTTCTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR TCA 90 bp CACTGCATTGACAAATTTCGACTGTATCATAACAACATGACATACCAGCCCTCTTTCTTTGTTTCTACGTaGTTTGTCAATGCCGATACT +
Preference number: 4 (lower is better)
Translates to: HCIDKFRLYHNNMTYQPSFFVST*FVNADT
Trigger: AGTATCGGCATTGACAAATCACGTAGAAACAAAGAA...AGAGGGCTGGTATGTCATGTTGTTATGATACAGTCGAAATTTGTCAATGCAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR GCA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACGGGATTCTTCCAGTTTaGTCCTCAACCAGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: TVVIYSILCFYVICQCRYGILPV*SSTSQN
Trigger: ATTTTGACTGGTTGAGGAGCAAACTGGAAGAATCCC...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCGGTTGTCTTGTCCCTTaGTTTCAAATTTTCGTAGTG +
Preference number: 4 (lower is better)
Translates to: NIFFCHTERVRQSYSGCIGCLVP*FQIFVV
Trigger: CACTACGAAAATTTGAAACCAAGGGACAAGACAACC...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CCA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCATGCTGGTTTGTTATTaGATAAAGGCCGAGATGACA +
Preference number: 4 (lower is better)
Translates to: NIFFCHTERVRQSYSGCIMLVCY*IKAEMT
Trigger: TGTCATCTCGGCCTTTATCCAATAACAAACCAGCAT...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS GCA 90 bp CTGTCACCACCCACGGCCTCCTCGCTGCTGGAGCCGGCCAGCGGGTaGGGCATGTCGCGCAGGGAGTGGGGCCCCGTGGACGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LSPPTASSLLEPASG*GMSRREWGPVDGRA
Trigger: GGCCCTGCCGTCCACGGGGCCCCACTCCCTGCGCGACATGCCGCACCCGCTGGCCGGCTCCAGCAGCGAGGAGGCCGTGGGTGGTGACAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS CCA 90 bp GGTCCGGGCTGGGCGTGCTGTCACCACCCACGGCCTCCTCGCTGCTaGAGCCGGCCAGCGGGTGCGGCATGTCGCGCAGGGAGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: GPGWACCHHPRPPRC*SRPAGAACRAGSGA
Trigger: GGCCCCACTCCCTGCGCGACATGCCGCACCCGCTGGCCGGCTCCAGCAGCGAGGAGGCCGTGGGTGGTGACAGCACGCCCAGCCCGGACC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS GCA 90 bp GCAGGTCCGGGCTGGGCGTGCTGTCACCACCCACGGCCTCCTCGCTaGTGGAGCCGGCCAGCGGGTGCGGCATGTCGCGCAGGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: AGPGWACCHHPRPPR*WSRPAGAACRAGSG
Trigger: CCCACTCCCTGCGCGACATGCCGCACCCGCTGGCCGGCTCCAGCAGCGAGGAGGCCGTGGGTGGTGACAGCACGCCCAGCCCGGACCTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS GCA 90 bp CCTTGTCACCGAAGCTGCGGGCCATCAGCAGGTCCGGGCTGGGCGTaGTGTCACCACCCACGGCCTCCTCGCTGCTGGAGCCGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: PCHRSCGPSAGPGWA*CHHPRPPRCWSRPA
Trigger: CGCTGGCCGGCTCCAGCAGCGAGGAGGCCGTGGGTGGTGACAGCACGCCCAGCCCGGACCTGCTGATGGCCCGCAGCTTCGGTGACAAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS GCA 90 bp ACCGCCCACACCCCAGAGCTGCCTGGGGCTGCCCATGAAGTCAGATaGTGGCCATCGCCTTGTGCCTGTGCTGTAGTGGTCCACAGCAGG +
Preference number: 5 (lower is better)
Translates to: TAHTPELPGAAHEVR*WPSPCACAVVVHSR
Trigger: CCTGCTGTGGACCACTACAGCACAGGCACAAGGCGATGGCCAGCATCTGACTTCATGGGCAGCCCCAGGCAGCTCTGGGGTGTGGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS TCA 90 bp AGCACTGCTGACCGCCCACACCCCAGAGCTGCCTGGGGCTGCCCATaGAGTCAGATGCTGGCCATCGCCTTGTGCCTGTGCTGTAGTGGT +
Preference number: 5 (lower is better)
Translates to: STADRPHPRAAWGCP*SQMLAIALCLCCSG
Trigger: ACCACTACAGCACAGGCACAAGGCGATGGCCAGCATCTGACTTCATGGGCAGCCCCAGGCAGCTCTGGGGTGTGGGCGGTCAGCAGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 90 bp CACCCTCCAGGGGTTCAGCCAGCTCACCCTCCAAGGCGCTCCATGTaGAGTACACAGGCCCGTATTCTCTCAGCTCCACAAGGTACTCTA +
Preference number: 5 (lower is better)
Translates to: HPPGVQPAHPPRRSM*STQARILSAPQGTL
Trigger: TAGAGTACCTTGTGGAGCTGAGAGAATACGGGCCTGTGTACTCCACATGGAGCGCCTTGGAGGGTGAGCTGGCTGAACCCCTGGAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp CACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAAAATTCCACTTGCAGACACGTCCGCCGGTACCTaGGGGCGGTCTTCCTTCCGC +
Preference number: 5 (lower is better)
Translates to: HSNSGCSSGCHPKIPLADTSAGT*GRSSFR
Trigger: GCGGAAGGAAGACCGCCCCAAGGTACCGGCGGACGT...GTCTGCAAGTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS TCA 90 bp AGGCTAAAACGACAGGATCGCTTGAGCCCGAGTTCAAGGCTGCAGTaGGCTATGACTGGGCCACTATACCCCTGCCTGGGTGAGAGAGCA +
Preference number: 5 (lower is better)
Translates to: RLKRQDRLSPSSRLQ*AMTGPLYPCLGERA
Trigger: TGCTCTCTCACCCAGGCAGGGGTATAGTGGCCCAGTCATAGCTCACTGCAGCCTTGAACTCGGGCTCAAGCGATCCTGTCGTTTTAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 90 bp AGAAACCTGCGTTCCAGCCAGAGTTGGCCTCAGAATGACCTGCTCTaGCTCAGGGATCCCTGGTGGATGGGGAAAAGCACTTTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: RNLRSSQSWPQNDLL*LRDPWWMGKSTFLV
Trigger: CACCAGGAAAGTGCTTTTCCCCATCCACCAGGGATCCCTGAGCCAGAGCAGGTCATTCTGAGGCCAACTCTGGCTGGAACGCAGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 90 bp TTGTGCCTGTGCTGTAGTGGTCCACAGCAGGGGTCAAGGATCATGTaGCCCTGTGCTGGCTGCTTCCAAGTCTTCACTCTCCACTTGCCA +
Preference number: 5 (lower is better)
Translates to: LCLCCSGPQQGSRIM*PCAGCFQVFTLHLP
Trigger: TGGCAAGTGGAGAGTGAAGACTTGGAAGCAGCCAGCACAGGGCCACATGATCCTTGACCCCTGCTGTGGACCACTACAGCACAGGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS-3UTR CAA 90 bp CCAACACACCCAACGCAAGCTGTGAGGCTGGCCCAGGAGAGAACATTTTCCTCAGGCAAAATGAGATCCTaGTCACCGAAGCTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: PTHPTQAVRLAQERTFSSGKMRS*SPKLRA
Trigger: GGCCCGCAGCTTCGGTGACAAGGATCTCATTTTGCC...TGAGGAAAATGTTCTCTCCTGGGCCAGCCTCACAGCTTGCGTTGGGTGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAGTGGCCAAAGCAGGGTaGCCCCAGCCCTATAATTGG +
Preference number: 5 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPVAKAG*PQPYNW
Trigger: CCAATTATAGGGCTGGGGCAACCCTGCTTTGGCCAC...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCATCGGGGGTACATGGGTaGTTCTTACCTGTCCGCATC +
Preference number: 5 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPSGVHG*FLPVRI
Trigger: GATGCGGACAGGTAAGAACAACCCATGTACCCCCGA...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp GTTAAGGACTTGCCAGGGAGGCACCAATGCCTCCTAGGCCAAGACGAGTCAATGCCCAAAGATGAGCATTaGCTGCTGGGCTGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: VKDLPGRHQCLLGQDESMPKDEH*LLGWSG
Trigger: ACCAGACCAGCCCAGCAGCAAATGCTCATCTTTGGG...CATTGACTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTTGCATCTGCGAAGAGGCAAATGGTaGGGACTGCTGGCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: SDLDVLPADQYFQVNLHLRRGKW*GLLALR
Trigger: TCTGAGGGCCAGCAGTCCCAACCATTTGCCTCTTCG...CAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS TCA 90 bp TCCATGTCAGCTTTCAGGTCAGCATTGAAACACTCCATCCGATCCTaGCATTTCTCGACGTCCGCCGGTACCTTGGGGCGGTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SMSAFRSALKHSIRS*HFSTSAGTLGRSSF
Trigger: GAAGGAAGACCGCCCCAAGGTACCGGCGGACGTCGAGAAATGTCAGGATCGGATGGAGTGTTTCAATGCTGACCTGAAAGCTGACATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374232.8
ENST00000416585.1
CDS GCA 90 bp GCCATCCCCATGAGTAGCTGCCGGAAGTCCTGCCTCTTGTTGTTCTaGCACCTCTCCATGTCAGCTTTCAGGTCAGCATTGAAACACTCC +
Preference number: 5 (lower is better)
Translates to: AIPMSSCRKSCLLLF*HLSMSAFRSALKHS
Trigger: GGAGTGTTTCAATGCTGACCTGAAAGCTGACATGGAGAGGTGGCAGAACAACAAGAGGCAGGACTTCCGGCAGCTACTCATGGGGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374232.8
ENST00000416585.1
ENST00000604751.1
CDS GCA 90 bp GCTGAGATCATGCCACTGCACTTCAGCCTCAGCTGGCTGTCGGCCTaGCTGCCAGTCATGATGGCTACTACACTAGGAAGTTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: AEIMPLHFSLSWLSA*LPVMMATTLGSFFI
Trigger: GATGAAGAAACTTCCTAGTGTAGTAGCCATCATGACTGGCAGGCAGGCCGACAGCCAGCTGAGGCTGAAGTGCAGTGGCATGATCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS-3UTR CAA 90 bp GTTAAGGACTTGCCAGGGAGGCACCAATGCCTCCTAGGCCAAGACGAGTCAATGTCTACAAGGCAGTCTTaGGCACAGAAGCCTCCGTGT +
Preference number: 5 (lower is better)
Translates to: VKDLPGRHQCLLGQDESMSTRQS*AQKPPC
Trigger: ACACGGAGGCTTCTGTGCCAAAGACTGCCTTGTAGA...CATTGACTCGTCTTGGCCTAGGAGGCATTGGTGCCTCCCTGGCAAGTCCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCACTGCTAGGGAGGGCCTaGTATTCCACTGCCATGTAT +
Preference number: 5 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPLLGRA*YSTAMY
Trigger: ATACATGGCAGTGGAATACAAGGCCCTCCCTAGCAG...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS GCA 90 bp TGGATGTTCTTGTCAGCCATCCCCATGAGTAGCTGCCGGAAGTCCTaGCTCTTGTTGTTCTGCCACCTCTCCATGTCAGCTTTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: WMFLSAIPMSSCRKS*LLLFCHLSMSAFRS
Trigger: TGACCTGAAAGCTGACATGGAGAGGTGGCAGAACAACAAGAGGCAGGACTTCCGGCAGCTACTCATGGGGATGGCTGACAAGAACATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374232.8
ENST00000416585.1
ENST00000604751.1
CDS-3UTR CAA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCATGAAGAAGCTGGACTaGAAGTACCTGCTGGAGTAC +
Preference number: 5 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSMKKLD*KYLLEY
Trigger: GTACTCCAGCAGGTACTTCAAGTCCAGCTTCTTCAT...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCGGCTTCATACTCTGCTaGAACTTGGTCCCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSGFILC*NLVPLL
Trigger: AAGAAGAGGGACCAAGTTCAAGCAGAGTATGAAGCC...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp ATGGCAGGACCAAGTCACACAGTAACTCTGGATGTTCCTCGGGCTGCCATCCCAGGAGGTATGCTGCTCTaGCTGAGAGATATTCTAGCC +
Preference number: 5 (lower is better)
Translates to: MAGPSHTVTLDVPRAAIPGGMLL*LRDILA
Trigger: GGCTAGAATATCTCTCAGCAAGAGCAGCATACCTCC...TGGGATGGCAGCCCGAGGAACATCCAGAGTTACTGTGTGACTTGGTCCTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS TCA 90 bp TCCATGTCAGCTTTCAGGTCAGCATTGAAACACTCCATCCGATCCTaGCATTTCTCGACGTCCGCCGGTACTTGCCAGAAGGGTCTGGAA +
Preference number: 5 (lower is better)
Translates to: SMSAFRSALKHSIRS*HFSTSAGTCQKGLE
Trigger: TTCCAGACCCTTCTGGCAAGTACCGGCGGACGTCGAGAAATGTCAGGATCGGATGGAGTGTTTCAATGCTGACCTGAAAGCTGACATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS TCA 90 bp ACTGGGCCTTCTCATAATACTGGATGTTCTTGTCAGCCATCCCCATaGGTAGCTGCCGGAAGTCCTGCCTCTTGTTGTTCTGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: TGPSHNTGCSCQPSP*VAAGSPASCCSATS
Trigger: AGAGGTGGCAGAACAACAAGAGGCAGGACTTCCGGCAGCTACTCATGGGGATGGCTGACAAGAACATCCAGTATTATGAGAAGGCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS TCA 90 bp TTAATGAATGCATGCCCTGTCAGAGGGTGTAGCATCTCTCAGCGCTaGCTTACGCTGACTAATAAGTCAGCACTGCTGACCGCCCACACC +
Preference number: 5 (lower is better)
Translates to: LMNACPVRGCSISQR*LTLTNKSALLTAHT
Trigger: GGTGTGGGCGGTCAGCAGTGCTGACTTATTAGTCAGCGTAAGTCAGCGCTGAGAGATGCTACACCCTCTGACAGGGCATGCATTCATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS GCA 90 bp CAGAAGGGTCTGGAAACAACAGACACGAGGCCCCACTCTCCGGTCTaGATTAGCTCTGTATGTAGAAGTCTCCCTGCTGGCAGTTTACAA +
Preference number: 5 (lower is better)
Translates to: QKGLETTDTRPHSPV*ISSVCRSLPAGSLQ
Trigger: TTGTAAACTGCCAGCAGGGAGACTTCTACATACAGAGCTAATGCAGACCGGAGAGTGGGGCCTCGTGTCTGTTGTTTCCAGACCCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 90 bp GTACCTTGGGGCGGTCTTCCTTCCGCAGAGCCACAGCTTCCAGTTTaGCTTCATACTCTGCTTGAACTTGGTCCCTCTTCTTCAATACAC +
Preference number: 5 (lower is better)
Translates to: VPWGGLPSAEPQLPV*LHTLLELGPSSSIH
Trigger: GTGTATTGAAGAAGAGGGACCAAGTTCAAGCAGAGTATGAAGCCAAACTGGAAGCTGTGGCTCTGCGGAAGGAAGACCGCCCCAAGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374232.8
ENST00000416585.1
CDS-3UTR CAA 90 bp CCAACACACCCAACGCAAGCTGTGAGGCTGGCCCAGGAGAGAACATTTTCCTCAACAAAGGGCTCGCTGTaGCATTTGTCATTTTCGAGG +
Preference number: 5 (lower is better)
Translates to: PTHPTQAVRLAQERTFSSTKGSL*HLSFSR
Trigger: CCTCGAAAATGACAAATGCAACAGCGAGCCCTTTGT...TGAGGAAAATGTTCTCTCCTGGGCCAGCCTCACAGCTTGCGTTGGGTGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCAACAGCACCACAGCCTaGGCTGATGCGAGGATGACC +
Preference number: 5 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCNSTTA*ADARMT
Trigger: GGTCATCCTCGCATCAGCCAAGGCTGTGGTGCTGTT...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS TCA 90 bp TCTTGTTGTTCTGCCACCTCTCCATGTCAGCTTTCAGGTCAGCATTaGAACACTCCATCCGATCCTGACATTTCTCGACGTCCGCCGGTA +
Preference number: 5 (lower is better)
Translates to: SCCSATSPCQLSGQH*NTPSDPDISRRPPV
Trigger: TACCGGCGGACGTCGAGAAATGTCAGGATCGGATGGAGTGTTTCAATGCTGACCTGAAAGCTGACATGGAGAGGTGGCAGAACAACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374232.8
ENST00000416585.1
ENST00000604751.1
CDS-3UTR CAA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCCTGTACGTTAAGGACTaGCCAGGGAGGCACCAATGC +
Preference number: 5 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCLYVKD*PGRHQC
Trigger: GCATTGGTGCCTCCCTGGCAAGTCCTTAACGTACAG...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGGACAAGGACGCTGGCTaGCTCACTCAAGCATGGACG +
Preference number: 5 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQDKDAG*LTQAWT
Trigger: CGTCCATGCTTGAGTGAGCAAGCCAGCGTCCTTGTC...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS TCA 90 bp CAATGGACTTCTCATAATACTGGATGTTCTTGTCAGCCATCCCCATaGGTAGCTGCCGGAAGTCCTGCCTCTTGTTGTTCTGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: QWTSHNTGCSCQPSP*VAAGSPASCCSATS
Trigger: AGAGGTGGCAGAACAACAAGAGGCAGGACTTCCGGCAGCTACTCATGGGGATGGCTGACAAGAACATCCAGTATTATGAGAAGTCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416585.1
CDS-3UTR CAA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTTGCATCTGTGGGATTCTTCCAGTTaGCTCCTCAACCAGTCAAAA +
Preference number: 5 (lower is better)
Translates to: SDLDVLPADQYFQVNLHLWDSSS*LLNQSK
Trigger: TTTTGACTGGTTGAGGAGCAAACTGGAAGAATCCCA...CAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTTGCATCTGGATGCTGGTTTGTTATaGGATAAAGGCCGAGATGAC +
Preference number: 5 (lower is better)
Translates to: SDLDVLPADQYFQVNLHLDAGLL*DKGRDD
Trigger: GTCATCTCGGCCTTTATCCAATAACAAACCAGCATC...CAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS TCA 90 bp TCCTTCCGCAGAGCCACAGCTTCCAGTTTGGCTTCATACTCTGCTTaGACTTGGTCCCTCTTCTTCAATACACTCTTCATGGAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: SFRRATASSLASYSA*TWSLFFNTLFMESE
Trigger: CTCTGACTCCATGAAGAGTGTATTGAAGAAGAGGGACCAAGTTCAAGCAGAGTATGAAGCCAAACTGGAAGCTGTGGCTCTGCGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374232.8
ENST00000416585.1
CDS GCA 90 bp GTCTTCCTTCCGCAGAGCCACAGCTTCCAGTTTGGCTTCATACTCTaGTTGAACTTGGTCCCTCTTCTTCAATACACTCTTCATGGAGTC +
Preference number: 5 (lower is better)
Translates to: VFLPQSHSFQFGFIL*LNLVPLLQYTLHGV
Trigger: GACTCCATGAAGAGTGTATTGAAGAAGAGGGACCAAGTTCAAGCAGAGTATGAAGCCAAACTGGAAGCTGTGGCTCTGCGGAAGGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374232.8
ENST00000416585.1
CDS CCA 90 bp GTGGGCTGGGATTCTTCCAGTTTGCTCCTCAACCAGTCAAAATCCTaGTATCTTCGACGAACAGAATATTCTGGCAGGTCAAACTCCACC +
Preference number: 5 (lower is better)
Translates to: VGWDSSSLLLNQSKS*YLRRTEYSGRSNST
Trigger: GGTGGAGTTTGACCTGCCAGAATATTCTGTTCGTCGAAGATACCAGGATTTTGACTGGTTGAGGAGCAAACTGGAAGAATCCCAGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp ATCCTTGAAAAGCAGGCCCCGGGTTCTCTCCCACAACTGGCAACTCAGCTGTCCATATTAAAGTGTTCATaGAAAGACAGCACAGGATGG +
Preference number: 5 (lower is better)
Translates to: ILEKQAPGSLPQLATQLSILKCS*KDSTGW
Trigger: CCATCCTGTGCTGTCTTTCAATGAACACTTTAATAT...GGACAGCTGAGTTGCCAGTTGTGGGAGAGAACCCGGGGCCTGCTTTTCAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACGCTTTCAGGTCAGCATaGAAACACTCCATCCGATCC +
Preference number: 5 (lower is better)
Translates to: KHNETEPSRPMLSNCGINAFRSA*KHSIRS
Trigger: GGATCGGATGGAGTGTTTCAATGCTGACCTGAAAGC...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AAGCCTCCGTGTGACACTTCTAGGGAATATCTCTTTTGTGCTTGGTCAAAACGAGTGTCAGAAACAAGCTaGGGGAGCATTCCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: KPPCDTSREYLFCAWSKRVSETS*GSIPLS
Trigger: GCTCAGGGGAATGCTCCCCAAGCTTGTTTCTGACAC...TCGTTTTGACCAAGCACAAAAGAGATATTCCCTAGAAGTGTCACACGGAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACAAGCAGTGCCCATGCTaGCTACAAATCACAAGGCTC +
Preference number: 5 (lower is better)
Translates to: KHNETEPSRPMLSNCGINKQCPC*LQITRL
Trigger: GAGCCTTGTGATTTGTAGCAAGCATGGGCACTGCTT...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCCCATCTGCTGCCATCTaGAAGGCTTTTGGAAGTGAG +
Preference number: 5 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCPSAAI*KAFGSE
Trigger: CTCACTTCCAAAAGCCTTCAAGATGGCAGCAGATGG...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp CCTTCACAACATGGAGGTATGCTGCTCTTGCTGAGAGATATTCTAGCCTCACAGATGGCCCTCACTTTCTaGCTTGTTTCTTTAGGGGGC +
Preference number: 5 (lower is better)
Translates to: PSQHGGMLLLLRDILASQMALTF*LVSLGG
Trigger: GCCCCCTAAAGAAACAAGCAAGAAAGTGAGGGCCAT...CTGTGAGGCTAGAATATCTCTCAGCAAGAGCAGCATACCTCCATGTTGTGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS TCA 90 bp CAACTCCTTACCTTCTGGTCCAGCCTCTTGACCAGCTCCTCAGCCTaGATGAATCTAATCGTTCCTACTCCTGAAAAGCCTCTTACTGTT +
Preference number: 5 (lower is better)
Translates to: QLLTFWSSLLTSSSA*MNLIVPTPEKPLTV
Trigger: AACAGTAAGAGGCTTTTCAGGAGTAGGAACGATTAGATTCATTCAGGCTGAGGAGCTGGTCAAGAGGCTGGACCAGAAGGTAAGGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS TCA 90 bp AACTCTATGACACATCTAATAAGGTCCAGGCCCCATGCTAGGTGCTaGGATACAGAAAGAATAGCACGTGACTGTGTCTGCCCTAGCACA +
Preference number: 5 (lower is better)
Translates to: NSMTHLIRSRPHARC*DTERIARDCVCPST
Trigger: TGTGCTAGGGCAGACACAGTCACGTGCTATTCTTTCTGTATCTCAGCACCTAGCATGGGGCCTGGACCTTATTAGATGTGTCATAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 90 bp AACCTCTCCAACCTCACTAATATAAGGGAGCACGGAATCCAGATTTaGGAGAGCAGGAAGGGCATCCCAGAAATGACTTCTATGACAAGG +
Preference number: 5 (lower is better)
Translates to: NLSNLTNIREHGIQI*ESRKGIPEMTSMTR
Trigger: CCTTGTCATAGAAGTCATTTCTGGGATGCCCTTCCTGCTCTCCCAAATCTGGATTCCGTGCTCCCTTATATTAGTGAGGTTGGAGAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS-3UTR CAA 90 bp AGTGACCTTGACGTGCTGCCCGCTGACCAGTATTTCCAGGTGAACTTGCATCTGTACTCTATTTCTTCTTaGATGATCCGCTGGGCTATT +
Preference number: 5 (lower is better)
Translates to: SDLDVLPADQYFQVNLHLYSISS*MIRWAI
Trigger: AATAGCCCAGCGGATCATCAAAGAAGAAATAGAGTA...CAGATGCAAGTTCACCTGGAAATACTGGTCAGCGGGCAGCACGTCAAGGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS TCA 90 bp ATATGGAGACATCATAGAGAAATGAAGATGCTTACCTGCAGGAACTaGAAACATCAGCCATGGCCAGGCCCCCAGAAGACAAAAGAAGGG +
Preference number: 5 (lower is better)
Translates to: IWRHHREMKMLTCRN*KHQPWPGPQKTKEG
Trigger: CCCTTCTTTTGTCTTCTGGGGGCCTGGCCATGGCTGATGTTTTCAGTTCCTGCAGGTAAGCATCTTCATTTCTCTATGATGTCTCCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS-3UTR CAA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACCCGCCAGTGACGTGCTaGACTGACTCGCCCATTCTG +
Preference number: 5 (lower is better)
Translates to: TVVIYSILCFYVICQCRYPPVTC*TDSPIL
Trigger: CAGAATGGGCGAGTCAGTCAAGCACGTCACTGGCGG...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AAGCCTCCGTGTGACACTTCTAGGGAATATCTCTTTTGTGCTTGGTCAAAACGAGAGATGTTTCTGTGGTaGTTTTCCCAGCACTGCGTC +
Preference number: 5 (lower is better)
Translates to: KPPCDTSREYLFCAWSKREMFLW*FSQHCV
Trigger: GACGCAGTGCTGGGAAAACAACCACAGAAACATCTC...TCGTTTTGACCAAGCACAAAAGAGATATTCCCTAGAAGTGTCACACGGAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACTTGGAAGACAGATCCTaGGTGACTGTTTGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: KHNETEPSRPMLSNCGINLEDRS*VTVCFV
Trigger: CACAAAGCAAACAGTCACCAAGGATCTGTCTTCCAA...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AAACACAATGAAACAGAACCAAGCCGTCCTATGCTGTCCAACTGCGGCATCAACGTACACACATGCTTCTaGGGATCATCAACTATAACG +
Preference number: 5 (lower is better)
Translates to: KHNETEPSRPMLSNCGINVHTCF*GSSTIT
Trigger: CGTTATAGTTGATGATCCCAAGAAGCATGTGTGTAC...GTTGATGCCGCAGTTGGACAGCATAGGACGGCTTGGTTCTGTTTCATTGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCGGCTCGCTGTTGCATTaGTCATTTTCGAGGCCCGTC +
Preference number: 5 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGGSLLH*SFSRPV
Trigger: GACGGGCCTCGAAAATGACAAATGCAACAGCGAGCC...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp GGGCCTTGTATTCCACTGCCATGTATTCAAGCCTCAAAACCTATGTCTGTCTGCAGAACTTCCTGTTATTaGATCACAAAAGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GPCIPLPCIQASKPMSVCRTSCY*ITKGSL
Trigger: GAGGCTGCCTTTTGTGATCAAATAACAGGAAGTTCT...GCAGACAGACATAGGTTTTGAGGCTTGAATACATGGCAGTGGAATACAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCGCTGGAGTACCACCGTaGGGCAAAATGAGATCCTTG +
Preference number: 5 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGAGVPP*GKMRSL
Trigger: CAAGGATCTCATTTTGCCCAACGGTGGTACTCCAGC...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp CACTGCATTGACAAATTTCGACTGTATCATAACAACATGACATACCAGCCCTCTCAGCAATGCTATCCCTaGCTTCTTGTAGGCGTTCAG +
Preference number: 5 (lower is better)
Translates to: HCIDKFRLYHNNMTYQPSQQCYP*LLVGVQ
Trigger: CTGAACGCCTACAAGAAGCAAGGGATAGCATTGCTG...AGAGGGCTGGTATGTCATGTTGTTATGATACAGTCGAAATTTGTCAATGCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCAAGTCCTGCCTCTTGTaGTTCTGCCACCTCTCCATG +
Preference number: 5 (lower is better)
Translates to: NIFFCHTERVRQSYSGCIKSCLL*FCHLSM
Trigger: CATGGAGAGGTGGCAGAACAACAAGAGGCAGGACTT...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp CCTTCACAACATGGAGGTATGCTGCTCTTGCTGAGAGATATTCTAGCCTCACAGAGGTTGTCTTGTCCCTaGGTTTCAAATTTTCGTAGT +
Preference number: 5 (lower is better)
Translates to: PSQHGGMLLLLRDILASQRLSCP*VSNFRS
Trigger: ACTACGAAAATTTGAAACCAAGGGACAAGACAACCT...CTGTGAGGCTAGAATATCTCTCAGCAAGAGCAGCATACCTCCATGTTGTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS TCA 90 bp CTTGACCAGCTCCTCAGCCTGAATGAATCTAATCGTTCCTACTCCTaGAAAGCCTCTTACTGTTTAGAGAAATGTCATTCCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: LDQLLSLNESNRSYS*KASYCLEKCHSLST
Trigger: TGTGGACAAGGAATGACATTTCTCTAAACAGTAAGAGGCTTTTCAGGAGTAGGAACGATTAGATTCATTCAGGCTGAGGAGCTGGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS TCA 90 bp GAAGGCCTGAAGGTGAAAATATATCAAAGGTTTAGGAATTCAGTGTaGAGGCAGCAGACGGAAGGACAAGTATTACGGAGGACAGTAAGA +
Preference number: 5 (lower is better)
Translates to: EGLKVKIYQRFRNSV*RQQTEGQVLRRTVR
Trigger: TCTTACTGTCCTCCGTAATACTTGTCCTTCCGTCTGCTGCCTTCACACTGAATTCCTAAACCTTTGATATATTTTCACCTTCAGGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS-3UTR CAA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGTCAATGGTTCCCAGTTaGAGTGCAAATGTATCTAAG +
Preference number: 5 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQSMVPS*SANVSK
Trigger: CTTAGATACATTTGCACTCAAACTGGGAACCATTGA...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AATGCACTCCCAACTCACAGCAATGAAGGGAACAGGCACACAGAAATACAACAGATCCTTGGTGACTGTTaGCTTTGTGATCTGAAAAGT +
Preference number: 5 (lower is better)
Translates to: NALPTHSNEGNRHTEIQQILGDC*LCDLKS
Trigger: ACTTTTCAGATCACAAAGCAAACAGTCACCAAGGAT...CTGTTGTATTTCTGTGTGCCTGTTCCCTTCATTGCTGTGAGTTGGGAGTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp CCCTATAATTGGATCACCCAGTTTCCACAGGTCCTTAAAGTAGGTGTCTGGGAAATATCTCTTTTGTGCTaGGTCAAAACGAAGAGGCAA +
Preference number: 5 (lower is better)
Translates to: PYNWITQFPQVLKVGVWEISLLC*VKTKRQ
Trigger: TTGCCTCTTCGTTTTGACCAAGCACAAAAGAGATAT...TTCCCAGACACCTACTTTAAGGACCTGTGGAAACTGGGTGATCCAATTATAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AAAACAGACTTAGCTTACAGTCACCATGATCTCCAGGTCATGCTGGTTTATTTCATCCCAAAATTCCACTaGCAGACTGCCACATGGTCA +
Preference number: 5 (lower is better)
Translates to: KTDLAYSHHDLQVMLVYFIPKFH*QTATWS
Trigger: TGACCATGTGGCAGTCTGCAAGTGGAATTTTGGGAT...GAAATAAACCAGCATGACCTGGAGATCATGGTGACTGTAAGCTAAGTCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACCATAGGCCTTGGAGGTaGCTCTTGACTTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: TVVIYSILCFYVICQCRYHRPWR*LLTSLF
Trigger: GAAGAGGGAAGTCAAGAGCAACCTCCAAGGCCTATG...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS TCA 90 bp TTAAGAAGCAAATGTCACAAGGCTTTCTTCAATGGGATGTTCAATTaGGTACTTCCAGTCAACAGTGCTTCCCAAAGTGGGTGGTGTGAA +
Preference number: 5 (lower is better)
Translates to: LRSKCHKAFFNGMFN*VLPVNSASQSGWCE
Trigger: TTCACACCACCCACTTTGGGAAGCACTGTTGACTGGAAGTACTCAATTGAACATCCCATTGAAGAAAGCCTTGTGACATTTGCTTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS-3UTR CAA 90 bp AACATATTTTTCTGCCACACAGAAAGGGTTAGACAGTCATACTCAGGATGTATCTATTTCCAGGTGAACTaGCATCTGAAGCAGCGCCTT +
Preference number: 5 (lower is better)
Translates to: NIFFCHTERVRQSYSGCIYFQVN*HLKQRL
Trigger: AAGGCGCTGCTTCAGATGCAAGTTCACCTGGAAATA...GATACATCCTGAGTATGACTGTCTAACCCTTTCTGTGTGGCAGAAAAATATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp CACTGGACATTTGTAAAGCATACCTTCCCCAAGGTAAAGCTTCCTATGTTCCCATTAAGAGATGCTGGTTaGTTATTGGATAAAGGCCGA +
Preference number: 5 (lower is better)
Translates to: HWTFVKHTFPKVKLPMFPLRDAG*LLDKGR
Trigger: TCGGCCTTTATCCAATAACAAACCAGCATCTCTTAA...TGGGAACATAGGAAGCTTTACCTTGGGGAAGGTATGCTTTACAAATGTCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS TCA 90 bp ATAACGAAGAGATCTCTAGTCTCACCATCAATATCATCATCAAGCTaGAGTCTGTTGAGAAGGGAAGATGAAGAAGCTGGACTTGAAGTA +
Preference number: 5 (lower is better)
Translates to: ITKRSLVSPSISSSS*SLLRREDEEAGLEV
Trigger: TACTTCAAGTCCAGCTTCTTCATCTTCCCTTCTCAACAGACTTCAGCTTGATGATGATATTGATGGTGAGACTAGAGATCTCTTCGTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS TCA 90 bp TCTTCAATACACTCTTCATGGAGTCAGAGTATAAAATATATTCCCTaGGCACAGGTAGGAAGTCTTCTGTCATGTCATCTGTCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: SSIHSSWSQSIKYIP*AQVGSLLSCHLSAL
Trigger: AAGAGCTGACAGATGACATGACAGAAGACTTCCTACCTGTGCTCAGGGAATATATTTTATACTCTGACTCCATGAAGAGTGTATTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374232.8
ENST00000416585.1
CDS CCA 90 bp TTATACAGGATAAAATACACGGCTGCAGAATACATTCAAGGTATTTaGGCTCTGAGAGTTTGTATCTCTAATCCTCTTGCAGGGAATGAA +
Preference number: 5 (lower is better)
Translates to: LYRIKYTAAEYIQGI*ALRVCISNPLAGNE
Trigger: TTCATTCCCTGCAAGAGGATTAGAGATACAAACTCTCAGAGCCCAAATACCTTGAATGTATTCTGCAGCCGTGTATTTTATCCTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS-3UTR CAA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACATACTCTGCTTGAACTaGGTCCCTCTTCTTCAATAC +
Preference number: 5 (lower is better)
Translates to: TVVIYSILCFYVICQCRYILCLN*VPLLQY
Trigger: GTATTGAAGAAGAGGGACCAAGTTCAAGCAGAGTAT...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp CACTGCATTGACAAATTTCGACTGTATCATAACAACATGACATACCAGCCCTCTAAAACTACTGCTTATTaGAGGCTCAGATTCGTAGTT +
Preference number: 5 (lower is better)
Translates to: HCIDKFRLYHNNMTYQPSKTTAY*RLRFVV
Trigger: AACTACGAATCTGAGCCTCAAATAAGCAGTAGTTTT...AGAGGGCTGGTATGTCATGTTGTTATGATACAGTCGAAATTTGTCAATGCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp AAATTCACATCAAAGGACTTGAGAATGGCACAAATAGGGTTTAACACTACAGGCGACATAAAGTTTGCCTaGTTCCAGGTCTTTCTGATA +
Preference number: 5 (lower is better)
Translates to: KFTSKDLRMAQIGFNTTGDIKFA*FQVFLI
Trigger: TATCAGAAAGACCTGGAACAAGGCAAACTTTATGTC...GCCTGTAGTGTTAAACCCTATTTGTGCCATTCTCAAGTCCTTTGATGTGAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACAAAGTTTCCAATCTGTaGCATTCTAGTGTCAGAAAC +
Preference number: 5 (lower is better)
Translates to: TVVIYSILCFYVICQCRYKVSNL*HSSVRN
Trigger: GTTTCTGACACTAGAATGCAACAGATTGGAAACTTT...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS-3UTR CAA 90 bp ACTGTTGTCATCTATAGCATTCTTTGTTTCTACGTGATTTGTCAATGCCGATACTCATGTTTTCTGTTTTaGGCATTTCAACCCATAGAG +
Preference number: 5 (lower is better)
Translates to: TVVIYSILCFYVICQCRYSCFLF*AFQPIE
Trigger: CTCTATGGGTTGAAATGCCAAAAACAGAAAACATGA...GTATCGGCATTGACAAATCACGTAGAAACAAAGAATGCTATAGATGACAACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS GCA 72 bp CCCACGGCCTCCTCGCTGCTGGAGCCGGCCAGCGGGTaGGGCATGTCGCGCAGGGAGTGGGGCCCCGTGGAC +
Preference number: 6 (lower is better)
Translates to: PTASSLLEPASG*GMSRREWGPVD
Trigger: GTCCACGGGGCCCCACTCCCTGCGCGACATGCCGCACCCGCTGGCCGGCTCCAGCAGCGAGGAGGCCGTGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS GCA 72 bp GGCTGGGCGTGCTGTCACCACCCACGGCCTCCTCGCTaGTGGAGCCGGCCAGCGGGTGCGGCATGTCGCGCA +
Preference number: 6 (lower is better)
Translates to: GWACCHHPRPPR*WSRPAGAACRA
Trigger: TGCGCGACATGCCGCACCCGCTGGCCGGCTCCAGCAGCGAGGAGGCCGTGGGTGGTGACAGCACGCCCAGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS GCA 72 bp CGAAGCTGCGGGCCATCAGCAGGTCCGGGCTGGGCGTaGTGTCACCACCCACGGCCTCCTCGCTGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: RSCGPSAGPGWA*CHHPRPPRCWS
Trigger: GCTCCAGCAGCGAGGAGGCCGTGGGTGGTGACAGCACGCCCAGCCCGGACCTGCTGATGGCCCGCAGCTTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS CCA 72 bp TGTCACCGAAGCTGCGGGCCATCAGCAGGTCCGGGCTaGGCGTGCTGTCACCACCCACGGCCTCCTCGCTGC +
Preference number: 6 (lower is better)
Translates to: CHRSCGPSAGPG*ACCHHPRPPRC
Trigger: GCAGCGAGGAGGCCGTGGGTGGTGACAGCACGCCCAGCCCGGACCTGCTGATGGCCCGCAGCTTCGGTGACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS GCA 72 bp ACCCCAGAGCTGCCTGGGGCTGCCCATGAAGTCAGATaGTGGCCATCGCCTTGTGCCTGTGCTGTAGTGGTC +
Preference number: 6 (lower is better)
Translates to: TPELPGAAHEVR*WPSPCACAVVV
Trigger: GACCACTACAGCACAGGCACAAGGCGATGGCCAGCATCTGACTTCATGGGCAGCCCCAGGCAGCTCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 72 bp CCAGAGCTGCCTGGGGCTGCCCATGAAGTCAGATGCTaGCCATCGCCTTGTGCCTGTGCTGTAGTGGTCCAC +
Preference number: 6 (lower is better)
Translates to: PELPGAAHEVRC*PSPCACAVVVH
Trigger: GTGGACCACTACAGCACAGGCACAAGGCGATGGCCAGCATCTGACTTCATGGGCAGCCCCAGGCAGCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS GCA 72 bp CCTGTGAGGGGCTTCAGACTCCAGCTACAGCGAGCCTaGCCCTTTTCTTCAAGGGACTGTCTTGAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: PVRGFRLQLQRA*PFSSRDCLEGS
Trigger: GGAGCCCTCAAGACAGTCCCTTGAAGAAAAGGGGCAGGCTCGCTGTAGCTGGAGTCTGAAGCCCCTCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 72 bp GGGGTTCAGCCAGCTCACCCTCCAAGGCGCTCCATGTaGAGTACACAGGCCCGTATTCTCTCAGCTCCACAA +
Preference number: 6 (lower is better)
Translates to: GVQPAHPPRRSM*STQARILSAPQ
Trigger: TTGTGGAGCTGAGAGAATACGGGCCTGTGTACTCCACATGGAGCGCCTTGGAGGGTGAGCTGGCTGAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS GCA 72 bp ACCTGCGTTCCAGCCAGAGTTGGCCTCAGAATGACCTaGTCTGGCTCAGGGATCCCTGGTGGATGGGGAAAA +
Preference number: 6 (lower is better)
Translates to: TCVPARVGLRMT*SGSGIPGGWGK
Trigger: TTTTCCCCATCCACCAGGGATCCCTGAGCCAGAGCAGGTCATTCTGAGGCCAACTCTGGCTGGAACGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 72 bp ATTTCTCGACGTCCGCCGGTACTTGCCAGAAGGGTCTaGAAACAACAGACACGAGGCCCCACTCTCCGGTCT +
Preference number: 6 (lower is better)
Translates to: ISRRPPVLARRV*KQQTRGPTLRS
Trigger: AGACCGGAGAGTGGGGCCTCGTGTCTGTTGTTTCCAGACCCTTCTGGCAAGTACCGGCGGACGTCGAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 72 bp CGTTCCAGCCAGAGTTGGCCTCAGAATGACCTGCTCTaGCTCAGGGATCCCTGGTGGATGGGGAAAAGCACT +
Preference number: 6 (lower is better)
Translates to: RSSQSWPQNDLL*LRDPWWMGKST
Trigger: AGTGCTTTTCCCCATCCACCAGGGATCCCTGAGCCAGAGCAGGTCATTCTGAGGCCAACTCTGGCTGGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS TCA 72 bp GCTTTCAGGTCAGCATTGAAACACTCCATCCGATCCTaGCATTTCTCGACGTCCGCCGGTACCTTGGGGCGG +
Preference number: 6 (lower is better)
Translates to: AFRSALKHSIRS*HFSTSAGTLGR
Trigger: CCGCCCCAAGGTACCGGCGGACGTCGAGAAATGTCAGGATCGGATGGAGTGTTTCAATGCTGACCTGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374232.8
ENST00000416585.1
CDS TCA 72 bp TCCACTTGCCAGCCCTGTGCTGAGTTGGTTCCTTGGTaGGGGTCTTCAGGCTGGTTGGCACTAGCCATTCTG +
Preference number: 6 (lower is better)
Translates to: STCQPCAELVPW*GSSGWLALAIL
Trigger: CAGAATGGCTAGTGCCAACCAGCCTGAAGACCCTCACCAAGGAACCAACTCAGCACAGGGCTGGCAAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 72 bp ACCCACTGCTTAAGAAACCTGCGTTCCAGCCAGAGTTaGCCTCAGAATGACCTGCTCTGGCTCAGGGATCCC +
Preference number: 6 (lower is better)
Translates to: THCLRNLRSSQS*PQNDLLWLRDP
Trigger: GGGATCCCTGAGCCAGAGCAGGTCATTCTGAGGCCAACTCTGGCTGGAACGCAGGTTTCTTAAGCAGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS TCA 72 bp AGTCCTCAGCTTGTAGCCGCCAGTGACGTGCTTGACTaGCTCGCCCATTCTGGTCAGCAATGCTATCCCTTG +
Preference number: 6 (lower is better)
Translates to: SPQLVAASDVLD*LAHSGQQCYPL
Trigger: CAAGGGATAGCATTGCTGACCAGAATGGGCGAGTCAGTCAAGCACGTCACTGGCGGCTACAAGCTGAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS GCA 72 bp TTGTCAGCCATCCCCATGAGTAGCTGCCGGAAGTCCTaGCTCTTGTTGTTCTGCCACCTCTCCATGTCAGCT +
Preference number: 6 (lower is better)
Translates to: LSAIPMSSCRKS*LLLFCHLSMSA
Trigger: AGCTGACATGGAGAGGTGGCAGAACAACAAGAGGCAGGACTTCCGGCAGCTACTCATGGGGATGGCTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374232.8
ENST00000416585.1
ENST00000604751.1
CDS GCA 72 bp CTGGAAACAACAGACACGAGGCCCCACTCTCCGGTCTaGATTAGCTCTGTATGTAGAAGTCTCCCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: LETTDTRPHSPV*ISSVCRSLPAG
Trigger: GCCAGCAGGGAGACTTCTACATACAGAGCTAATGCAGACCGGAGAGTGGGGCCTCGTGTCTGTTGTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 72 bp TGGCCTCAGAATGACCTGCTCTGGCTCAGGGATCCCTaGTGGATGGGGAAAAGCACTTTCCTGGTGATGGAA +
Preference number: 6 (lower is better)
Translates to: WPQNDLLWLRDP*WMGKSTFLVME
Trigger: TTCCATCACCAGGAAAGTGCTTTTCCCCATCCACCAGGGATCCCTGAGCCAGAGCAGGTCATTCTGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS TCA 72 bp GCATGCCCTGTCAGAGGGTGTAGCATCTCTCAGCGCTaGCTTACGCTGACTAATAAGTCAGCACTGCTGACC +
Preference number: 6 (lower is better)
Translates to: ACPVRGCSISQR*LTLTNKSALLT
Trigger: GGTCAGCAGTGCTGACTTATTAGTCAGCGTAAGTCAGCGCTGAGAGATGCTACACCCTCTGACAGGGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS GCA 72 bp TACTGGATGTTCTTGTCAGCCATCCCCATGAGTAGCTaGCGGAAGTCCTGCCTCTTGTTGTTCTGCCACCTC +
Preference number: 6 (lower is better)
Translates to: YWMFLSAIPMSS*RKSCLLLFCHL
Trigger: GAGGTGGCAGAACAACAAGAGGCAGGACTTCCGGCAGCTACTCATGGGGATGGCTGACAAGAACATCCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374232.8
ENST00000416585.1
ENST00000604751.1
CDS CCA 72 bp GGCGGTCTTCCTTCCGCAGAGCCACAGCTTCCAGTTTaGCTTCATACTCTGCTTGAACTTGGTCCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: GGLPSAEPQLPV*LHTLLELGPSS
Trigger: AGAAGAGGGACCAAGTTCAAGCAGAGTATGAAGCCAAACTGGAAGCTGTGGCTCTGCGGAAGGAAGACCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374232.8
ENST00000416585.1
CDS CAA 72 bp GAAGCTGGACTTGAAGTACCTGCTGGAGTACCACCGTaGGGCAAAATGAGATCCTTGTCACCGAAGCTGCGG +
Preference number: 6 (lower is better)
Translates to: EAGLEVPAGVPP*GKMRSLSPKLR
Trigger: CCGCAGCTTCGGTGACAAGGATCTCATTTTGCCCAACGGTGGTACTCCAGCAGGTACTTCAAGTCCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS CAA 90 bp TTCTTGTCAGCCATCCCCATGAGTAGCTGCCGGAAGTCCTGCCTCTaGTTGTTCTGCCACCTCTCCATGTCAGCTTTCAGGTCAGCATTG +
Preference number: 6 (lower is better)
Translates to: FLSAIPMSSCRKSCL*LFCHLSMSAFRSAL
Trigger: CAATGCTGACCTGAAAGCTGACATGGAGAGGTGGCAGAACAACAAGAGGCAGGACTTCCGGCAGCTACTCATGGGGATGGCTGACAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374232.8
ENST00000416585.1
ENST00000604751.1
CDS TCA 72 bp GCTTTCAGGTCAGCATTGAAACACTCCATCCGATCCTaGCATTTCTCGACGTCCGCCGGTACTTGCCAGAAG +
Preference number: 6 (lower is better)
Translates to: AFRSALKHSIRS*HFSTSAGTCQK
Trigger: CTTCTGGCAAGTACCGGCGGACGTCGAGAAATGTCAGGATCGGATGGAGTGTTTCAATGCTGACCTGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 72 bp CCTCAGAATGACCTGCTCTGGCTCAGGGATCCCTGGTaGATGGGGAAAAGCACTTTCCTGGTGATGGAAAAA +
Preference number: 6 (lower is better)
Translates to: PQNDLLWLRDPW*MGKSTFLVMEK
Trigger: TTTTTCCATCACCAGGAAAGTGCTTTTCCCCATCCACCAGGGATCCCTGAGCCAGAGCAGGTCATTCTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS GCA 72 bp AAGCAAATGGTCAACATGCTCCTTTTAGCTAGCAGCTaGAGGGAGATGGGTCACAGTGCACCAGCACACCTT +
Preference number: 6 (lower is better)
Translates to: KQMVNMLLLASS*REMGHSAPAHL
Trigger: AAGGTGTGCTGGTGCACTGTGACCCATCTCCCTGCAGCTGCTAGCTAAAAGGAGCATGTTGACCATTTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 72 bp CTAACTAGTCACCTGGGTGCTGTGCTGAAAGTCCCATaGGAGAACTCAAAGCGTGCATTATCACAGCCTGAG +
Preference number: 6 (lower is better)
Translates to: LTSHLGAVLKVP*ENSKRALSQPE
Trigger: CTCAGGCTGTGATAATGCACGCTTTGAGTTCTCCCATGGGACTTTCAGCACAGCACCCAGGTGACTAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS GCA 72 bp GACCATGTTCAACCTCTCCACCCTTACTCATCAATATaGTCATTCCCCAACTCCTTACCTTCTGGTCCAGCC +
Preference number: 6 (lower is better)
Translates to: DHVQPLHPYSSI*SFPNSLPSGPA
Trigger: GGCTGGACCAGAAGGTAAGGAGTTGGGGAATGAGCATATTGATGAGTAAGGGTGGAGAGGTTGAACATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS TCA 72 bp CATCATAGAGAAATGAAGATGCTTACCTGCAGGAACTaGAAACATCAGCCATGGCCAGGCCCCCAGAAGACA +
Preference number: 6 (lower is better)
Translates to: HHREMKMLTCRN*KHQPWPGPQKT
Trigger: TGTCTTCTGGGGGCCTGGCCATGGCTGATGTTTTCAGTTCCTGCAGGTAAGCATCTTCATTTCTCTATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CAA 90 bp TTCCTTCCGCAGAGCCACAGCTTCCAGTTTGGCTTCATACTCTGCTaGAACTTGGTCCCTCTTCTTCAATACACTCTTCATGGAGTCAGA +
Preference number: 6 (lower is better)
Translates to: FLPQSHSFQFGFILC*NLVPLLQYTLHGVR
Trigger: TCTGACTCCATGAAGAGTGTATTGAAGAAGAGGGACCAAGTTCAAGCAGAGTATGAAGCCAAACTGGAAGCTGTGGCTCTGCGGAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374232.8
ENST00000416585.1
CDS CAA 90 bp ACTCAGGAGGGGGATGGAGCTCAGGCCCTTGTCTTCTGGGTAGTTTaGTTACTACTGTTGCTTTTAAGAAGCAAATGTCACAAGGCTTTC +
Preference number: 6 (lower is better)
Translates to: TQEGDGAQALVFWVV*LLLLLLRSKCHKAF
Trigger: GAAAGCCTTGTGACATTTGCTTCTTAAAAGCAACAGTAGTAACAAAACTACCCAGAAGACAAGGGCCTGAGCTCCATCCCCCTCCTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CAA 72 bp CACAGCTTCCAGTTTGGCTTCATACTCTGCTTGAACTaGGTCCCTCTTCTTCAATACACTCTTCATGGAGTC +
Preference number: 6 (lower is better)
Translates to: HSFQFGFILCLN*VPLLQYTLHGV
Trigger: GACTCCATGAAGAGTGTATTGAAGAAGAGGGACCAAGTTCAAGCAGAGTATGAAGCCAAACTGGAAGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374232.8
ENST00000416585.1
CDS CAA 72 bp CAGAGCCACAGCTTCCAGTTTGGCTTCATACTCTGCTaGAACTTGGTCCCTCTTCTTCAATACACTCTTCAT +
Preference number: 6 (lower is better)
Translates to: QSHSFQFGFILC*NLVPLLQYTLH
Trigger: ATGAAGAGTGTATTGAAGAAGAGGGACCAAGTTCAAGCAGAGTATGAAGCCAAACTGGAAGCTGTGGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374232.8
ENST00000416585.1
CDS CAA 72 bp TGGAAGGTGTTAAGCAGGAACACAGAGTGCTTAAATTaGCATCTTAGAAACAGCTCCCTGGCAACACTGAGG +
Preference number: 6 (lower is better)
Translates to: WKVLSRNTECLN*HLRNSSLATLR
Trigger: CCTCAGTGTTGCCAGGGAGCTGTTTCTAAGATGCAAATTTAAGCACTCTGTGTTCCTGCTTAACACCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS TCA 72 bp ACACGGCTGCAGAATACATTCAAGGTATTTGGGCTCTaGGAGTTTGTATCTCTAATCCTCTTGCAGGGAATG +
Preference number: 6 (lower is better)
Translates to: TRLQNTFKVFGL*EFVSLILLQGM
Trigger: CATTCCCTGCAAGAGGATTAGAGATACAAACTCTCAGAGCCCAAATACCTTGAATGTATTCTGCAGCCGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 72 bp GATTCTTCCAGTTTGCTCCTCAACCAGTCAAAATCCTaGTATCTTCGACGAACAGAATATTCTGGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: DSSSLLLNQSKS*YLRRTEYSGRS
Trigger: TGACCTGCCAGAATATTCTGTTCGTCGAAGATACCAGGATTTTGACTGGTTGAGGAGCAAACTGGAAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS CCA 72 bp TCCACAAGGTACTCTATTTCTTCTTTGATGATCCGCTaGGCTATTCGATCAATGGTTCCCAGTTTGAGTGCA +
Preference number: 6 (lower is better)
Translates to: STRYSISSLMIR*AIRSMVPSLSA
Trigger: TGCACTCAAACTGGGAACCATTGATCGAATAGCCCAGCGGATCATCAAAGAAGAAATAGAGTACCTTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS CAA 72 bp GCACCAGCACACCTTGGTCAATGCCTACCTATGATTTaGCCTAAAGCCTGGCTTGTAATTATCATTAACCCT +
Preference number: 6 (lower is better)
Translates to: APAHLGQCLPMI*PKAWLVIIINP
Trigger: AGGGTTAATGATAATTACAAGCCAGGCTTTAGGCAAAATCATAGGTAGGCATTGACCAAGGTGTGCTGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CAA 90 bp GATAGCTGTTGGAAGGTGTTAAGCAGGAACACAGAGTGCTTAAATTaGCATCTTAGAAACAGCTCCCTGGCAACACTGAGGACAATGAAT +
Preference number: 6 (lower is better)
Translates to: DSCWKVLSRNTECLN*HLRNSSLATLRTMN
Trigger: ATTCATTGTCCTCAGTGTTGCCAGGGAGCTGTTTCTAAGATGCAAATTTAAGCACTCTGTGTTCCTGCTTAACACCTTCCAACAGCTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CAA 90 bp GATGGAGCTCAGGCCCTTGTCTTCTGGGTAGTTTTGTTACTACTGTaGCTTTTAAGAAGCAAATGTCACAAGGCTTTCTTCAATGGGATG +
Preference number: 6 (lower is better)
Translates to: DGAQALVFWVVLLLL*LLRSKCHKAFFNGM
Trigger: CATCCCATTGAAGAAAGCCTTGTGACATTTGCTTCTTAAAAGCAACAGTAGTAACAAAACTACCCAGAAGACAAGGGCCTGAGCTCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS TCA 72 bp AAATGTCACAAGGCTTTCTTCAATGGGATGTTCAATTaGGTACTTCCAGTCAACAGTGCTTCCCAAAGTGGG +
Preference number: 6 (lower is better)
Translates to: KCHKAFFNGMFN*VLPVNSASQSG
Trigger: CCCACTTTGGGAAGCACTGTTGACTGGAAGTACTCAATTGAACATCCCATTGAAGAAAGCCTTGTGACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CAA 72 bp TCCTTCCCAGGTCAGATTCTGTCTGTGACTACAGACTaGATGTTCTTATACAGGATAAAATACACGGCTGCA +
Preference number: 6 (lower is better)
Translates to: SFPGQILSVTTD*MFLYRIKYTAA
Trigger: TGCAGCCGTGTATTTTATCCTGTATAAGAACATCAAGTCTGTAGTCACAGACAGAATCTGACCTGGGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CAA 72 bp CAAATGTCACAAGGCTTTCTTCAATGGGATGTTCAATaGAGTACTTCCAGTCAACAGTGCTTCCCAAAGTGG +
Preference number: 6 (lower is better)
Translates to: QMSQGFLQWDVQ*STSSQQCFPKW
Trigger: CCACTTTGGGAAGCACTGTTGACTGGAAGTACTCAATTGAACATCCCATTGAAGAAAGCCTTGTGACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS TCA 72 bp AGATCTCTAGTCTCACCATCAATATCATCATCAAGCTaGAGTCTGTTGAGAAGGGAAGATGAAGAAGCTGGA +
Preference number: 6 (lower is better)
Translates to: RSLVSPSISSSS*SLLRREDEEAG
Trigger: TCCAGCTTCTTCATCTTCCCTTCTCAACAGACTTCAGCTTGATGATGATATTGATGGTGAGACTAGAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374232.8
CDS TCA 72 bp CACTCTTCATGGAGTCAGAGTATAAAATATATTCCCTaGGCACAGGTAGGAAGTCTTCTGTCATGTCATCTG +
Preference number: 6 (lower is better)
Translates to: HSSWSQSIKYIP*AQVGSLLSCHL
Trigger: CAGATGACATGACAGAAGACTTCCTACCTGTGCTCAGGGAATATATTTTATACTCTGACTCCATGAAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374232.8
ENST00000416585.1
CDS TCA 72 bp CTCCTCAGCCTGAATGAATCTAATCGTTCCTACTCCTaGAAAGCCTCTTACTGTTTAGAGAAATGTCATTCC +
Preference number: 6 (lower is better)
Translates to: LLSLNESNRSYS*KASYCLEKCHS
Trigger: GGAATGACATTTCTCTAAACAGTAAGAGGCTTTTCAGGAGTAGGAACGATTAGATTCATTCAGGCTGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS TCA 72 bp AAGGTGAAAATATATCAAAGGTTTAGGAATTCAGTGTaGAGGCAGCAGACGGAAGGACAAGTATTACGGAGG +
Preference number: 6 (lower is better)
Translates to: KVKIYQRFRNSV*RQQTEGQVLRR
Trigger: CCTCCGTAATACTTGTCCTTCCGTCTGCTGCCTTCACACTGAATTCCTAAACCTTTGATATATTTTCACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 72 bp TCTTGTAACTCTCTATGGTCAATTCTTACAGCATCGTaGCCTATAAACAAGTCCCATTGTCACCATATGGAG +
Preference number: 6 (lower is better)
Translates to: SCNSLWSILTAS*PINKSHCHHME
Trigger: CTCCATATGGTGACAATGGGACTTGTTTATAGGCCACGATGCTGTAAGAATTGACCATAGAGAGTTACAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CAA 90 bp GTGAATCGTTCCTTCCCAGGTCAGATTCTGTCTGTGACTACAGACTaGATGTTCTTATACAGGATAAAATACACGGCTGCAGAATACATT +
Preference number: 6 (lower is better)
Translates to: VNRSFPGQILSVTTD*MFLYRIKYTAAEYI
Trigger: AATGTATTCTGCAGCCGTGTATTTTATCCTGTATAAGAACATCAAGTCTGTAGTCACAGACAGAATCTGACCTGGGAAGGAACGATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS CCA 72 bp AAGATGTTTCTCTTCAGAGTAAATGGGGATAGCTGTTaGAAGGTGTTAAGCAGGAACACAGAGTGCTTAAAT +
Preference number: 6 (lower is better)
Translates to: KMFLFRVNGDSC*KVLSRNTECLN
Trigger: ATTTAAGCACTCTGTGTTCCTGCTTAACACCTTCCAACAGCTATCCCCATTTACTCTGAAGAGAAACATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1
CDS GCA 72 bp AGACTTGATGTTCTTATACAGGATAAAATACACGGCTaGAGAATACATTCAAGGTATTTGGGCTCTGAGAGT +
Preference number: 6 (lower is better)
Translates to: RLDVLIQDKIHG*RIHSRYLGSES
Trigger: ACTCTCAGAGCCCAAATACCTTGAATGTATTCTGCAGCCGTGTATTTTATCCTGTATAAGAACATCAAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604751.1