RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000205302

Ensembl transcript IDs: ENST00000379516.7, ENST00000505854.5, ENST00000505934.5, ENST00000506847.5, ENST00000506874.1, ENST00000510372.5, ENST00000512394.5, ENST00000514030.1, ENST00000514949.1

Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCAAACACATGCTAAGGATACTTCGATATATAAATTGTATCCAGTaGCTCACTAGAGATGACTTAGTTACACATACCATATCTTGTTCC +
Preference number: 1 (lower is better)
Translates to: SKHMLRILRYINCIQ*LTRDDLVTHTISCS
Trigger: GGAACAAGATATGGTATGTGTAACTAAGTCATCTCTAGTGAGTCACTGGATACAATTTATATATCGAAGTATCCTTAGCATGTGTTTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
3UTR-3UTR TCA 90 bp CTTGATTGTCATTTTGTTGACAGCGTCGGCAGCCTTGTTCACCATCCTCAATATTGCTCTAGGCAGCTCTaGACTTTCCAAGAACTGCCT +
Preference number: 2 (lower is better)
Translates to: LDCHFVDSVGSLVHHPQYCSRQL*TFQELP
Trigger: AGGCAGTTCTTGGAAAGTTCAGAGCTGCCTAGAGCA...ATATTGAGGATGGTGAACAAGGCTGCCGACGCTGTCAACAAAATGACAATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512394.5
3UTR-3UTR TCA 90 bp CGGCAGCCTTGTTCACCATCCTCAATATTCCTGCTCCACTCAGAGCCTGTGTATAACCAAGAAAGTCGCTaGATCTTCTTTTCACTGAAA +
Preference number: 2 (lower is better)
Translates to: RQPCSPSSIFLLHSEPVYNQESR*IFFSLK
Trigger: TTTCAGTGAAAAGAAGATTCAGCGACTTTCTTGGTT...ATACACAGGCTCTGAGTGGAGCAGGAATATTGAGGATGGTGAACAAGGCTGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512394.5
3UTR-3UTR GCA 90 bp CGGCAGCCTTGTTCACCATCCTCAATATTCCTGCTCCACTCAGAGCCTGTGTATTGTTGTTACTCTATATaGCATATAGGCATTCATGCC +
Preference number: 2 (lower is better)
Translates to: RQPCSPSSIFLLHSEPVYCCYSI*HIGIHA
Trigger: GGCATGAATGCCTATATGGCATATAGAGTAACAACA...ATACACAGGCTCTGAGTGGAGCAGGAATATTGAGGATGGTGAACAAGGCTGCCG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512394.5
3UTR-3UTR GCA 90 bp CTTGGTCATCCCTACTATACTCTTTTCTGGAGCTGGTGGCACAATATAACCAACCTTGCTAATTTGCTGTaGAAACCAAGAAAGTCGCTG +
Preference number: 2 (lower is better)
Translates to: LGHPYYTLFWSWWHNITNLANLL*KPRKSL
Trigger: CAGCGACTTTCTTGGTTTGCACAGCAAATTAGCAAG...GTTGGTTATATTGTGCCACCAGCTCCAGAAAAGAGTATAGTAGGGATGACCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512394.5
3UTR-3UTR CCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAAGTGTCGAAGGGAGGGTaGGTGATTCTATTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQVSKGG*VILLSL
Trigger: AAGAGACAATAGAATCACCCACCCTCCCTTCGACAC...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
3UTR-3UTR CCA 90 bp ACTGCTCTAGGCAGCTCTGAACTTTCCAAGAACTGCCTTAAATCAGGATCCTGTTACTATACTCTTTTCTaGAGCTGGTGGCACAATATA +
Preference number: 2 (lower is better)
Translates to: TALGSSELSKNCLKSGSCYYTLF*SWWHNI
Trigger: TATATTGTGCCACCAGCTCCAGAAAAGAGTATAGTA...ACAGGATCCTGATTTAAGGCAGTTCTTGGAAAGTTCAGAGCTGCCTAGAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512394.5
3UTR-3UTR TCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAACCAAATCCTTCACTGTaGGGGTTAGGAATGATAATT +
Preference number: 2 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQPNPSL*GLGMII
Trigger: AATTATCATTCCTAACCCTCACAGTGAAGGATTTGG...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
3UTR-3UTR CCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAACAAAATGACTTTGACTaGCCTATCTGCAGTCACTAT +
Preference number: 2 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQQNDFD*PICSHY
Trigger: ATAGTGACTGCAGATAGGCCAGTCAAAGTCATTTTG...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
3UTR CAA 90 bp CAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAACAGTaGGAAGAAATAAGTTCTCTGTATCCCAAAAGATTTCCTAGAATT +
Preference number: 2 (lower is better)
Translates to: QLPYLLQSYQRLKQQ*EEISSLYPKRFPRI
Trigger: AATTCTAGGAAATCTTTTGGGATACAGAGAACTTATTTCTTCCAACTGTTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
3UTR CAA 90 bp TCCCTTTTATTGCTATTTCCATGTCTGACCCATTATCTACTTTCATaGTTACATGAAACCAAATCCTTCACTGTGAGGGTTAGGAATGAT +
Preference number: 2 (lower is better)
Translates to: SLLLLFPCLTHYLLS*LHETKSFTVRVRND
Trigger: ATCATTCCTAACCCTCACAGTGAAGGATTTGGTTTCATGTAACAATGAAAGTAGATAATGGGTCAGACATGGAAATAGCAATAAAAGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
3UTR-3UTR GCA 90 bp TCCAAGAACTGCCTTAAATCAGGATCCTGTAGTAAAGTTGGATGTTTTACTGTTATTTGCTTGCTAATTTaGTGTGCAAACCAAGAAAGT +
Preference number: 2 (lower is better)
Translates to: SKNCLKSGSCSKVGCFTVICLLI*CANQES
Trigger: ACTTTCTTGGTTTGCACAGCAAATTAGCAAGCAAAT...AACAGTAAAACATCCAACTTTACTACAGGATCCTGATTTAAGGCAGTTCTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512394.5
3UTR GCA 72 bp AGCGTCGGCAGCCTTGTTCACCATCCTCAATATTCCTaGTCCACTCAGAGCCTGTGTATTAACTGCTCTAGG +
Preference number: 3 (lower is better)
Translates to: SVGSLVHHPQYS*STQSLCINCSR
Trigger: CCTAGAGCAGTTAATACACAGGCTCTGAGTGGAGCAGGAATATTGAGGATGGTGAACAAGGCTGCCGACGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512394.5
3UTR-3UTR CAA 90 bp ATTTTGTTGACAGCGTCGGCAGCCTTGTTCACCATCCTCAATATTCCTGCTCCATGGAAAGAGATGTCTTaGTTGTTACTCTATATGCCA +
Preference number: 3 (lower is better)
Translates to: ILLTASAALFTILNIPAPWKEMS*LLLYMP
Trigger: TGGCATATAGAGTAACAACAAAGACATCTCTTTCCA...TGGAGCAGGAATATTGAGGATGGTGAACAAGGCTGCCGACGCTGTCAACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512394.5
3UTR GCA 72 bp TTAACTGCTCTAGGCAGCTCTGAACTTTCCAAGAACTaGCTTAAATCAGGATCCTGTAGTAAAGTTGGATGT +
Preference number: 3 (lower is better)
Translates to: LTALGSSELSKN*LKSGSCSKVGC
Trigger: ACATCCAACTTTACTACAGGATCCTGATTTAAGGCAGTTCTTGGAAAGTTCAGAGCTGCCTAGAGCAGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512394.5
3UTR CCA 72 bp CATACCATATCTTGTTCCTATGGAAGGGATATGTGGTaGTTAAGCTCAAGAAGAGGGGTGTTTGTAAGAATA +
Preference number: 3 (lower is better)
Translates to: HTISCSYGRDMW*LSSRRGVFVRI
Trigger: TATTCTTACAAACACCCCTCTTCTTGAGCTTAACCACCACATATCCCTTCCATAGGAACAAGATATGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
3UTR CCA 72 bp GCAACCTCCCTTCCTTTAAAACAAAATGACTTTGACTaGCCTATCTGCAGTCACTATTATGGAATATCTGCT +
Preference number: 3 (lower is better)
Translates to: ATSLPLKQNDFD*PICSHYYGISA
Trigger: AGCAGATATTCCATAATAGTGACTGCAGATAGGCCAGTCAAAGTCATTTTGTTTTAAAGGAAGGGAGGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAGGGGCAGGGGAAAGGTaGGACGCGCGGCAGCTACGC +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILGAGER*DARQLR
Trigger: GCGTAGCTGCCGCGCGTCTCACCTTTCCCCTGCCCC...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR TCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCCAAGCACATCCCTCTaGCAGGCACCGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNPSTSL*QAPEVG
Trigger: CCCCACCTCCGGTGCCTGTCAGAGGGATGTGCTTGG...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR TCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTCGCAGGCTGCTCTCCTaGGGAGGCCCTGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLIRRLLS*GGPALS
Trigger: GCTGAGCGCAGGGCCTCCTCAGGAGAGCAGCCTGCG...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR TCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCGGTTCTGGCCCCTCTaGGGATTAGGTCGGCACCCG +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNRFWPL*GLGRHP
Trigger: CGGGTGCCGACCTAATCCTCAGAGGGGCCAGAACCG...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR GCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCCAGCGCTCACTTCATTaGGCTCCCCTGGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIQRSLH*APLAAA
Trigger: TGCCGCTGCCAGGGGAGCGCAATGAAGTGAGCGCTG...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR CCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCGATCCTCAAAGTCGGTaGGCTTCCCGTCCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIDPQSR*ASRPPA
Trigger: CGCTGGGGGACGGGAAGCCCACCGACTTTGAGGATC...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CCA 90 bp CTTGATTGTCATTTTGTTGACAGCGTCGGCAGCCTTGTTCACCATCCTCAATATGATCCTCAAAGTCGGTaGGCTTCCCGTCCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LDCHFVDSVGSLVHHPQYDPQSR*ASRPPA
Trigger: CGCTGGGGGACGGGAAGCCCACCGACTTTGAGGATC...ATATTGAGGATGGTGAACAAGGCTGCCGACGCTGTCAACAAAATGACAATCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR CCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTCATTGCGCTCCCCTaGCAGCGGCACACCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIFIALP*QRHTLP
Trigger: AGGGAGGGTGTGCCGCTGCCAGGGGAGCGCAATGAA...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR CCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTGCAAACACGGGGGATaGGGAGGGACAAGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATICKHGG*GGTSRG
Trigger: GCCCCGACTTGTCCCTCCCCATCCCCCGTGTTTGCA...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR CCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATGACAGGCACCGGAGGTaGGGCTCGCGTCACAGGTGT +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNDRHRR*GSRHRC
Trigger: ACACCTGTGACGCGAGCCCCACCTCCGGTGCCTGTC...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR TCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTGGAGACAGTGCTGGTaGACAGGTCCTCTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIWRQCW*TGPLRP
Trigger: AGGACGGAGAGGACCTGTTCACCAGCACTGTCTCCA...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp CTTGGTCATCCCTACTATACTCTTTTCTGGAGCTGGTGGCACAATATAACCAACTGGAGACAGTGCTGGTaGACAGGTCCTCTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LGHPYYTLFWSWWHNITNWRQCW*TGPLRP
Trigger: AGGACGGAGAGGACCTGTTCACCAGCACTGTCTCCA...GTTGGTTATATTGTGCCACCAGCTCCAGAAAAGAGTATAGTAGGGATGACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR CCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATGAAGGCCAGCTGAGCTaGGAAAGCGCCGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNEGQLS*ESAAAM
Trigger: CATTGCAGCGGCGCTTTCCCAGCTCAGCTGGCCTTC...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR TCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATGGAACCAGCAGTCCGTaGAGGGCCATTCCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNGTSSP*RAIPGK
Trigger: TTTCCCAGGAATGGCCCTTCACGGACTGCTGGTTCC...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR GCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAAAAGCGCCGCTGCAATaGTCGGTTCGGTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILKAPLQ*SVRFWP
Trigger: GGGCCAGAACCGAACCGAGCATTGCAGCGGCGCTTT...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR CCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATGGCACACCCTCCCTCTaGAAAGGAAAAGCGAGCACC +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNGTPSL*KGKAST
Trigger: GGTGCTCGCTTTTCCTTTCCAGAGGGAGGGTGTGCC...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR GCA 90 bp CGGCAGCCTTGTTCACCATCCTCAATATTCCTGCTCCACTCAGAGCCTGTGTATCTTGCTAATTTGCTGTaGAAACCAAGAAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: RQPCSPSSIFLLHSEPVYLANLL*KPRKSL
Trigger: CAGCGACTTTCTTGGTTTGCACAGCAAATTAGCAAG...ATACACAGGCTCTGAGTGGAGCAGGAATATTGAGGATGGTGAACAAGGCTGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR GCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTACTGGGAAAGCGCCGCTaGAATGCTCGGTTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILLGKRR*NARFGS
Trigger: AGAACCGAACCGAGCATTGCAGCGGCGCTTTCCCAG...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR GCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTGAAGAGGAGGACGTaGAAGAGACACCGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATILKRRT*KRHRGR
Trigger: CCTTCCTCGGTGTCTCTTGCACGTCCTCCTCTTCAA...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR CCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCGTGAAGGGCCATTCCTaGGAAAGTGCACCCATTCGT +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIVKGHS*ESAPIR
Trigger: ACGAATGGGTGCACTTTCCCAGGAATGGCCCTTCAC...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR TCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATGCCTCCAAAGTCCCTaGGCCAGTGACTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILCLQSP*ASDLDF
Trigger: GAAGTCCAAGTCACTGGCTCAGGGACTTTGGAGGCA...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTAGCCCTTCTCCGGCTTaGAGAGGAGGACGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLISPSPA*RGGRAR
Trigger: TCTTGCACGTCCTCCTCTTCAAGCCGGAGAAGGGCT...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR GCA 90 bp CACTTTGACCTTGGTCATCCCTACTATACTCTTTTCTGGAGCTGGTGGCACAATCATCCTCAATATTCCTaGTCCACTCAGAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: HFDLGHPYYTLFWSWWHNHPQYS*STQSLC
Trigger: ACACAGGCTCTGAGTGGAGCAGGAATATTGAGGATG...ATTGTGCCACCAGCTCCAGAAAAGAGTATAGTAGGGATGACCAAGGTCAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR GCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAGGAGGTTTACTGGGATaGAGAGCAAGCCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILGGLLG*RASPSP
Trigger: CGGAGAAGGGCTTGCTCTGCATCCCAGTAAACCTCC...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR CCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAAAGCCTCCCAAGTAGCTaGGACCACAAGCACACCCCA +
Preference number: 4 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQSLPSS*DHKHTP
Trigger: TGGGGTGTGCTTGTGGTCCCAGCTACTTGGGAGGCT...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATTCGGTGGAGGTTTACTaGGATGCAGAGCAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNSVEVY*DAEQAL
Trigger: AAGGGCTTGCTCTGCATCCCAGTAAACCTCCACCGA...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR TCA 90 bp CAAAGTATTGCAGAATGTCATGCCACAGTCCACTTAATTCAAAGAGGGTCAGGATGCTCTAGGCAGCTCTaGACTTTCCAAGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: QSIAECHATVHLIQRGSGCSRQL*TFQELP
Trigger: AGGCAGTTCTTGGAAAGTTCAGAGCTGCCTAGAGCA...TCCTGACCCTCTTTGAATTAAGTGGACTGTGGCATGACATTCTGCAATACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATTCTCTTTCCCCTTGTTaGACTTTCGCCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNSLSPC*TFASHS
Trigger: AGAGTGGGAGGCGAAAGTGCAACAAGGGGAAAGAGA...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTGCATGTGAGTCACTGTaGCTGGCCCATCAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLIACESL*LAHQAL
Trigger: AAGGGCTTGATGGGCCAGGCACAGTGACTCACATGC...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTACCATTCCTGGGAAAGTaGACCCATTCGTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILPFLGK*THSFPT
Trigger: TGTGGGGAACGAATGGGTGCACTTTCCCAGGAATGG...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR CCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCGCTAGGCAATGGCTTTaGCTTCAGGTAGGAATGCTT +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIARQWL*LQVGML
Trigger: AAGCATTCCTACCTGAAGCCAAAGCCATTGCCTAGC...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAAGCCTCCCAAGAAGCTaGGACTACAGGCATGTGAGT +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILSLPRS*DYRHVS
Trigger: ACTCACATGCCTGTAGTCCCAGCTTCTTGGGAGGCT...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
3UTR CAA 72 bp ATCTTGATTGTCATTTTGTTGACAGCGTCGGCAGCCTaGTTCACCATCCTCAATATTCCTGCTCCACTCAGA +
Preference number: 4 (lower is better)
Translates to: ILIVILLTASAA*FTILNIPAPLR
Trigger: TCTGAGTGGAGCAGGAATATTGAGGATGGTGAACAAGGCTGCCGACGCTGTCAACAAAATGACAATCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR TCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCGGCAGCTGTGTTGGCTaGAAGTTCTTTTCTATGACA +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIGSCVG*KFFSMT
Trigger: TGTCATAGAAAAGAACTTTCAGCCAACACAGCTGCC...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTCTGAACAGGAGAAGTaGAGATTGATGGGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATISEQEK*RLMGEV
Trigger: CACTTCACCCATCAATCTTCACTTCTCCTGTTCAGA...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTCCATAGATTACCATaGCCTATCTTCATGGCCCTC +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNLHRLP*PIFMAL
Trigger: GAGGGCCATGAAGATAGGTCATGGTAATCTATGGAG...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTAGTGACAGGTGTGACTaGAGGAGAAGGTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLISDRCD*RRRFRG
Trigger: TCCTCGGAACCTTCTCCTGCAGTCACACCTGTCACT...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp CAAAGTATTGCAGAATGTCATGCCACAGTCCACTTAATTCAAAGAGGGTCAGGACTTCTCCTCAACCTCTaGAAGCTGAGACAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: QSIAECHATVHLIQRGSGLLLNL*KLRQSS
Trigger: AGAGCTTTGTCTCAGCTTGCAGAGGTTGAGGAGAAG...TCCTGACCCTCTTTGAATTAAGTGGACTGTGGCATGACATTCTGCAATACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTCTCCTCAACCTCTaGAAGCTGAGACAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNLLLNL*KLRQSS
Trigger: AGAGCTTTGTCTCAGCTTGCAGAGGTTGAGGAGAAG...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp CAAAGTATTGCAGAATGTCATGCCACAGTCCACTTAATTCAAAGAGGGTCAGGAGCATCTTCCCATTTCTaGCAGCACTTCATTCGATGG +
Preference number: 4 (lower is better)
Translates to: QSIAECHATVHLIQRGSGASSHF*QHFIRW
Trigger: CCATCGAATGAAGTGCTGGCAGAAATGGGAAGATGC...TCCTGACCCTCTTTGAATTAAGTGGACTGTGGCATGACATTCTGCAATACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CCA 90 bp CTTGGTCATCCCTACTATACTCTTTTCTGGAGCTGGTGGCACAATATAACCAACAACTTCTGTGGGTTTTaGGCCATTGGAGTTTGCACT +
Preference number: 4 (lower is better)
Translates to: LGHPYYTLFWSWWHNITNNFCGF*AIGVCT
Trigger: AGTGCAAACTCCAATGGCCCAAAACCCACAGAAGTT...GTTGGTTATATTGTGCCACCAGCTCCAGAAAAGAGTATAGTAGGGATGACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR CCA 90 bp CACTTTGACCTTGGTCATCCCTACTATACTCTTTTCTGGAGCTGGTGGCACAATACTCTTTTCTGGAGCTaGTGGCACAATATAACCAAC +
Preference number: 4 (lower is better)
Translates to: HFDLGHPYYTLFWSWWHNTLFWS*WHNITN
Trigger: GTTGGTTATATTGTGCCACCAGCTCCAGAAAAGAGT...ATTGTGCCACCAGCTCCAGAAAAGAGTATAGTAGGGATGACCAAGGTCAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR CCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCCTTATTGCTAGGCAATaGCTTTGGCTTCAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATILIARQ*LWLQVG
Trigger: TCCTACCTGAAGCCAAAGCCATTGCCTAGCAATAAG...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CCA 90 bp CAAAGTATTGCAGAATGTCATGCCACAGTCCACTTAATTCAAAGAGGGTCAGGAGTGTCGAAGGGAGGGTaGGTGATTCTATTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: QSIAECHATVHLIQRGSGVSKGG*VILLSL
Trigger: AAGAGACAATAGAATCACCCACCCTCCCTTCGACAC...TCCTGACCCTCTTTGAATTAAGTGGACTGTGGCATGACATTCTGCAATACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp CAAAGTATTGCAGAATGTCATGCCACAGTCCACTTAATTCAAAGAGGGTCAGGACTTCTTTACCCACTTTaGCCTTGGTCATCCCTACTA +
Preference number: 4 (lower is better)
Translates to: QSIAECHATVHLIQRGSGLLYPL*PWSSLL
Trigger: TAGTAGGGATGACCAAGGTCAAAGTGGGTAAAGAAG...TCCTGACCCTCTTTGAATTAAGTGGACTGTGGCATGACATTCTGCAATACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTTGCTCTAGGCAGCTCTaGACTTTCCAAGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLICSRQL*TFQELP
Trigger: AGGCAGTTCTTGGAAAGTTCAGAGCTGCCTAGAGCA...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATGGCAGCTGTGTTGGCTaGAAGTTCTTTTCTATGACA +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNGSCVG*KFFSMT
Trigger: TGTCATAGAAAAGAACTTTCAGCCAACACAGCTGCC...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTCAACCTCTGCAAGCTaGGACAAAGCTCTAGATAAA +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATISTSAS*DKALDK
Trigger: TTTATCTAGAGCTTTGTCTCAGCTTGCAGAGGTTGA...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAAAAGTCCCTGAGCCAGTaGCTTGGACTTCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQKSLSQ*LGLPFH
Trigger: GTGAAAAGGAAGTCCAAGTCACTGGCTCAGGGACTT...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp TTAACTGCTCTAGGCAGCTCTGAACTTTCCAAGAACTGCCTTAAATCAGGATCCTGCACTAATATCTTCTaGAGGAAGACTAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LTALGSSELSKNCLKSGSCTNIF*RKTSWF
Trigger: GAACCAGCTAGTCTTCCTGCAGAAGATATTAGTGCA...GGATCCTGATTTAAGGCAGTTCTTGGAAAGTTCAGAGCTGCCTAGAGCAGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR GCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTGCACTAATATCTTCTaGAGGAAGACTAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATICTNIF*RKTSWF
Trigger: GAACCAGCTAGTCTTCCTGCAGAAGATATTAGTGCA...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTACATCCTCAATATTCCTaGTCCACTCAGAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILHPQYS*STQSLC
Trigger: ACACAGGCTCTGAGTGGAGCAGGAATATTGAGGATG...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAGCATCTTCCCATTTCTaGCAGCACTTCATTCGATGG +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILASSHF*QHFIRW
Trigger: CCATCGAATGAAGTGCTGGCAGAAATGGGAAGATGC...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTTCTCTTTCCCCTTGTTaGACTTTCGCCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLISLSPC*TFASHS
Trigger: AGAGTGGGAGGCGAAAGTGCAACAAGGGGAAAGAGA...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTATGATCTTGGCTCACTaGAACCTCCACCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLIMILAH*NLHLPG
Trigger: ACCAGGAAGGTGGAGGTTGCAGTGAGCCAAGATCAT...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCCTTCAATCTCTTCCCTaGATCTATCAAAGATCACGG +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATILQSLP*IYQRSR
Trigger: CCGTGATCTTTGATAGATCCAGGGAAGAGATTGAAG...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCCAGCACTTCATTCGATaGTCAAACACACCTTTCACT +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIQHFIR*SNTPFT
Trigger: AGTGAAAGGTGTGTTTGACCATCGAATGAAGTGCTG...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTGTGAGTCACTGTGCCTaGCCCATCAAGCCCTTATTA +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLIVSHCA*PIKPLL
Trigger: TAATAAGGGCTTGATGGGCCAGGCACAGTGACTCAC...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAACCTGAGCCAGTGACTTaGACTTCCTTTTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQPEPVT*TSFSQV
Trigger: CACCTGTGAAAAGGAAGTCCAAGTCACTGGCTCAGG...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCAGTTTCCTAAGTTGCTaGTCCAGATTCTCAAATTGC +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATISFLSC*SRFSNC
Trigger: GCAATTTGAGAATCTGGATCAGCAACTTAGGAAACT...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCGAAAGTTCTTTTCTATaGCAGACCAAGGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIESSFL*QTKAST
Trigger: TGTTGAAGCCTTGGTCTGTCATAGAAAAGAACTTTC...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp CAAAGTATTGCAGAATGTCATGCCACAGTCCACTTAATTCAAAGAGGGTCAGGATCAACCTCTGCAAGCTaGGACAAAGCTCTAGATAAA +
Preference number: 4 (lower is better)
Translates to: QSIAECHATVHLIQRGSGSTSAS*DKALDK
Trigger: TTTATCTAGAGCTTTGTCTCAGCTTGCAGAGGTTGA...TCCTGACCCTCTTTGAATTAAGTGGACTGTGGCATGACATTCTGCAATACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCGCAAAAGCTTGTTCTTaGTGTAACTGGTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIAKACS*CNWSIF
Trigger: GAAGATAGACCAGTTACATCAAGAACAAGCTTTTGC...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTCTTCTGTGGCTTCTaGAAAAAGATCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIFFCGF*KKIFSV
Trigger: GACAGAGAAGATCTTTTTGCAGAAGCCACAGAAGAA...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp ACTGCTCTAGGCAGCTCTGAACTTTCCAAGAACTGCCTTAAATCAGGATCCTGTTGTTGTTACTCTATATaGCATATAGGCATTCATGCC +
Preference number: 4 (lower is better)
Translates to: TALGSSELSKNCLKSGSCCCYSI*HIGIHA
Trigger: GGCATGAATGCCTATATGGCATATAGAGTAACAACA...ACAGGATCCTGATTTAAGGCAGTTCTTGGAAAGTTCAGAGCTGCCTAGAGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR GCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTCATCCTCAATATTCCTaGTCCACTCAGAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLIHPQYS*STQSLC
Trigger: ACACAGGCTCTGAGTGGAGCAGGAATATTGAGGATG...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAAACTTCTGTGGGTTTTaGGCCATTGGAGTTTGCACT +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILNFCGF*AIGVCT
Trigger: AGTGCAAACTCCAATGGCCCAAAACCCACAGAAGTT...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCAGCACTTCATTCGATaGTCAAACACACCTTTCACT +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNQHFIR*SNTPFT
Trigger: AGTGAAAGGTGTGTTTGACCATCGAATGAAGTGCTG...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCCATATCTTGTTCCTATaGAAGGGATATGTGGTGGTT +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIHILFL*KGYVVV
Trigger: AACCACCACATATCCCTTCCATAGGAACAAGATATG...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTTTCAAAAGAGCTCGGTaGAGGTTTACTGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLIFKRAR*RFTGMQ
Trigger: CTGCATCCCAGTAAACCTCCACCGAGCTCTTTTGAA...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR TCA 90 bp TGTTGTTACTCTATATGCCATATAGGCATTCATGCCATCACCAACTTTTTCTGGCTTCTTTACCCACTTTaGCCTTGGTCATCCCTACTA +
Preference number: 4 (lower is better)
Translates to: CCYSICHIGIHAITNFFWLLYPL*PWSSLL
Trigger: TAGTAGGGATGACCAAGGTCAAAGTGGGTAAAGAAG...CCAGAAAAAGTTGGTGATGGCATGAATGCCTATATGGCATATAGAGTAACAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR TCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTCTTCTTTACCCACTTTaGCCTTGGTCATCCCTACTA +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLILLYPL*PWSSLL
Trigger: TAGTAGGGATGACCAAGGTCAAAGTGGGTAAAGAAG...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCAGCTGTTGTTGTGTTTaGACTAGTGATTCTAAGTAC +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATISCCCV*TSDSKY
Trigger: GTACTTAGAATCACTAGTTCAAACACAACAACAGCT...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCAAGATAACGAGAAGATaGACAAAATCCATGGGACTT +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIKITRR*TKSMGL
Trigger: AAGTCCCATGGATTTTGTTCATCTTCTCGTTATCTT...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAACACCACACCCAGCCATaGCTTAAATTTTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQHHTQP*LKFSSA
Trigger: TGCTGATGAAAATTTAAGTCATGGCTGGGTGTGGTG...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCCAAATCCTTCACTGTaGGGGTTAGGAATGATAATT +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNPNPSL*GLGMII
Trigger: AATTATCATTCCTAACCCTCACAGTGAAGGATTTGG...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp CTTGGTCATCCCTACTATACTCTTTTCTGGAGCTGGTGGCACAATATAACCAACGCTTCTTCTTCAATCTaGAAAAAGATCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LGHPYYTLFWSWWHNITNASSSI*KKIFSV
Trigger: GACAGAGAAGATCTTTTTGCAGATTGAAGAAGAAGC...GTTGGTTATATTGTGCCACCAGCTCCAGAAAAGAGTATAGTAGGGATGACCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR CCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAAAACTTCTGTGGGTTTTaGGCCATTGGAGTTTGCACT +
Preference number: 4 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQNFCGF*AIGVCT
Trigger: AGTGCAAACTCCAATGGCCCAAAACCCACAGAAGTT...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTACTTCAATCTCTTCCCTaGATCTATCAAAGATCACGG +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILLQSLP*IYQRSR
Trigger: CCGTGATCTTTGATAGATCCAGGGAAGAGATTGAAG...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTACTATACTCTTTTCTaGAGCTGGTGGCACAATATA +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIYYTLF*SWWHNI
Trigger: TATATTGTGCCACCAGCTCCAGAAAAGAGTATAGTA...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTCTTATTGCTAGGCAATaGCTTTGGCTTCAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLILIARQ*LWLQVG
Trigger: TCCTACCTGAAGCCAAAGCCATTGCCTAGCAATAAG...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CCA 90 bp CAAAGTATTGCAGAATGTCATGCCACAGTCCACTTAATTCAAAGAGGGTCAGGATATGGAAGGGATATGTaGTGGTTAAGCTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: QSIAECHATVHLIQRGSGYGRDM*WLSSRR
Trigger: TCTTCTTGAGCTTAACCACCACATATCCCTTCCATA...TCCTGACCCTCTTTGAATTAAGTGGACTGTGGCATGACATTCTGCAATACTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTAGATAAAGCAGTATaGTCCTCAGAATTACCTAAC +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNLDKAV*SSELPN
Trigger: GTTAGGTAATTCTGAGGATCATACTGCTTTATCTAG...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTACCTTCTCTACTCATCTaGCTTCCTCCTTTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILPSLLI*LPPLKK
Trigger: TTTCTTTAAAGGAGGAAGTCAGATGAGTAGAGAAGG...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTACTAGTGAATATGATATaGAAATGCCTCCAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILLVNMI*KCLQSP
Trigger: GGGACTTTGGAGGCATTTTCATATCATATTCACTAG...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAAATCTTATCAGCGTCTaGAGCAACAGTTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILNLISV*SNSWKK
Trigger: TTTCTTCCAACTGTTGCTTCAGACGCTGATAAGATT...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAATCTGTGTATTCACCTTaGCTGGCTTCAGTTACAAAG +
Preference number: 4 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQSVYSP*LASVTK
Trigger: CTTTGTAACTGAAGCCAGTCAAGGTGAATACACAGA...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAATGCACTAATATCTTCTaGAGGAAGACTAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQCTNIF*RKTSWF
Trigger: GAACCAGCTAGTCTTCCTGCAGAAGATATTAGTGCA...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp CAAAGTATTGCAGAATGTCATGCCACAGTCCACTTAATTCAAAGAGGGTCAGGATGTTGTTACTCTATATaGCATATAGGCATTCATGCC +
Preference number: 4 (lower is better)
Translates to: QSIAECHATVHLIQRGSGCCYSI*HIGIHA
Trigger: GGCATGAATGCCTATATGGCATATAGAGTAACAACA...TCCTGACCCTCTTTGAATTAAGTGGACTGTGGCATGACATTCTGCAATACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATTGTTGTTACTCTATATaGCATATAGGCATTCATGCC +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNCCYSI*HIGIHA
Trigger: GGCATGAATGCCTATATGGCATATAGAGTAACAACA...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTCTTGCTAATTTGCTGTaGAAACCAAGAAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLILANLL*KPRKSL
Trigger: CAGCGACTTTCTTGGTTTGCACAGCAAATTAGCAAG...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCATTTGCTTGCTAATTTaGTGTGCAAACCAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: VESSITGTTSKVFLTATIICLLI*CANQES
Trigger: ACTTTCTTGGTTTGCACAGCAAATTAGCAAGCAAAT...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp CAAAGTATTGCAGAATGTCATGCCACAGTCCACTTAATTCAAAGAGGGTCAGGAATACCTTTCAAGAGCTaGTCTCCGTTTTTCTACAAA +
Preference number: 4 (lower is better)
Translates to: QSIAECHATVHLIQRGSGIPFKS*SPFFYK
Trigger: TTTGTAGAAAAACGGAGAGCAGCTCTTGAAAGGTAT...TCCTGACCCTCTTTGAATTAAGTGGACTGTGGCATGACATTCTGCAATACTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATATACCTTTCAAGAGCTaGTCTCCGTTTTTCTACAAA +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNIPFKS*SPFFYK
Trigger: TTTGTAGAAAAACGGAGAGCAGCTCTTGAAAGGTAT...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATTTCTCAAATTGCTGCTaGTTTTCTTCAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNFSNCC*FSSNHA
Trigger: TGCATGGTTTGAAGAAAAGCAGCAGCAATTTGAGAA...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTACTCTTTTCTGGAGCTaGTGGCACAATATAACCAAC +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLITLFWS*WHNITN
Trigger: GTTGGTTATATTGTGCCACCAGCTCCAGAAAAGAGT...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CCA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATTACTATACTCTTTTCTaGAGCTGGTGGCACAATATA +
Preference number: 4 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNYYTLF*SWWHNI
Trigger: TATATTGTGCCACCAGCTCCAGAAAAGAGTATAGTA...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAAGCAGACATACTCTTTaGTTCAATTCTAGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILSRHTL*FNSRSN
Trigger: ATTGCTCCTAGAATTGAATCAAAGAGTATGTCTGCT...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAAACCAAGAAAGTCGCTaGATCTTCTTTTCACTGAAA +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILNQESR*IFFSLK
Trigger: TTTCAGTGAAAAGAAGATTCAGCGACTTTCTTGGTT...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTAGTTTCCTAAGTTGCTaGTCCAGATTCTCAAATTGC +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLISFLSC*SRFSNC
Trigger: GCAATTTGAGAATCTGGATCAGCAACTTAGGAAACT...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTGAAAGTTCTTTTCTATaGCAGACCAAGGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLIESSFL*QTKAST
Trigger: TGTTGAAGCCTTGGTCTGTCATAGAAAAGAACTTTC...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAAGCTGTTGTTGTGTTTaGACTAGTGATTCTAAGTAC +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILSCCCV*TSDSKY
Trigger: GTACTTAGAATCACTAGTTCAAACACAACAACAGCT...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATGCTATTTCCATGTCTaGCCCATTATCTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILCYFHV*PIIYFH
Trigger: ATGAAAGTAGATAATGGGTCAGACATGGAAATAGCA...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTTTCTTCTGTGGCTTCTaGAAAAAGATCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLIFFCGF*KKIFSV
Trigger: GACAGAGAAGATCTTTTTGCAGAAGCCACAGAAGAA...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp CAAAGTATTGCAGAATGTCATGCCACAGTCCACTTAATTCAAAGAGGGTCAGGACTTTTCTTCAAACCATaGATCCGATTCATTCATCTT +
Preference number: 4 (lower is better)
Translates to: QSIAECHATVHLIQRGSGLFFKP*IRFIHL
Trigger: AAGATGAATGAATCGGATGCATGGTTTGAAGAAAAG...TCCTGACCCTCTTTGAATTAAGTGGACTGTGGCATGACATTCTGCAATACTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAACTGCAGTCACTATTATaGAATATCTGCTATCTCCCT +
Preference number: 4 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQLQSLL*NICYLP
Trigger: AGGGAGATAGCAGATATTCCATAATAGTGACTGCAG...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTCAAAATGACTTTGACTaGCCTATCTGCAGTCACTAT +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLIQNDFD*PICSHY
Trigger: ATAGTGACTGCAGATAGGCCAGTCAAAGTCATTTTG...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR TCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTAGCAGACATACTCTTTaGTTCAATTCTAGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLISRHTL*FNSRSN
Trigger: ATTGCTCCTAGAATTGAATCAAAGAGTATGTCTGCT...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTCTAGATAAAGCAGTATaGTCCTCAGAATTACCTAAC +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLILDKAV*SSELPN
Trigger: GTTAGGTAATTCTGAGGATCATACTGCTTTATCTAG...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR TCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTATTCCTTGTCAACTGTaGGCACAGATGATATACTTT +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLIIPCQL*AQMIYF
Trigger: AAAGTATATCATCTGTGCTCACAGTTGACAAGGAAT...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp TGTTGTTACTCTATATGCCATATAGGCATTCATGCCATCACCAACTTTTTCTGGATACCTTTCAAGAGCTaGTCTCCGTTTTTCTACAAA +
Preference number: 4 (lower is better)
Translates to: CCYSICHIGIHAITNFFWIPFKS*SPFFYK
Trigger: TTTGTAGAAAAACGGAGAGCAGCTCTTGAAAGGTAT...CCAGAAAAAGTTGGTGATGGCATGAATGCCTATATGGCATATAGAGTAACAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR GCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAATTCTCAAATTGCTGCTaGTTTTCTTCAAACCATGCA +
Preference number: 4 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQFSNCC*FSSNHA
Trigger: TGCATGGTTTGAAGAAAAGCAGCAGCAATTTGAGAA...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAAGATTCTCAAATTGCTaGTGCTTTTCTTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: ESSITGTTSKVFLTATILRFSNC*CFSSNH
Trigger: ATGGTTTGAAGAAAAGCAGCAGCAATTTGAGAATCT...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAAGCTTTGTGTTGTGCTTaGTTATTCATCAAATCATGG +
Preference number: 4 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQALCCA*LFIKSW
Trigger: CCATGATTTGATGAATAAGCAAGCACAACACAAAGC...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAATTTGACTGGCCTATCTaGAGTCACTATTATGGAATA +
Preference number: 4 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQFDWPI*SHYYGI
Trigger: TATTCCATAATAGTGACTGCAGATAGGCCAGTCAAA...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTTGTATTCACCTTGACTaGCTTCAGTTACAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLICIHLD*LQLQSF
Trigger: GAAACTTTGTAACTGAAGCCAGTCAAGGTGAATACA...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
3UTR CAA 72 bp TTGCTATTTCCATGTCTGACCCATTATCTACTTTCATaGTTACATGAAACCAAATCCTTCACTGTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: LLFPCLTHYLLS*LHETKSFTVRV
Trigger: AACCCTCACAGTGAAGGATTTGGTTTCATGTAACAATGAAAGTAGATAATGGGTCAGACATGGAAATAGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTCTTTTCTTCAAACCATaGATCCGATTCATTCATCTT +
Preference number: 4 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLILFFKP*IRFIHL
Trigger: AAGATGAATGAATCGGATGCATGGTTTGAAGAAAAG...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR GCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAAAGATTCTCAAATTGCTaGTGCTTTTCTTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQRFSNC*CFSSNH
Trigger: ATGGTTTGAAGAAAAGCAGCAGCAATTTGAGAATCT...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR GCA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAAAAAATTTTCTGGTCTTaGAGTGCACTATTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQKIFWS*SALFSA
Trigger: TGCACTAAATAGTGCACTGCAAGACCAGAAAATTTT...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CCA 90 bp CTTTGTTGTTACTCTATATGCCATATAGGCATTCATGCCATCACCAACTTTTTCTACTATACTCTTTTCTaGAGCTGGTGGCACAATATA +
Preference number: 4 (lower is better)
Translates to: LCCYSICHIGIHAITNFFYYTLF*SWWHNI
Trigger: TATATTGTGCCACCAGCTCCAGAAAAGAGTATAGTA...GAAAAAGTTGGTGATGGCATGAATGCCTATATGGCATATAGAGTAACAACAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR GCA 90 bp TTGTTGTTACTCTATATGCCATATAGGCATTCATGCCATCACCAACTTTTTCTGATTTGCTTGCTAATTTaGTGTGCAAACCAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: LLLLYMPYRHSCHHQLFLICLLI*CANQES
Trigger: ACTTTCTTGGTTTGCACAGCAAATTAGCAAGCAAAT...CAGAAAAAGTTGGTGATGGCATGAATGCCTATATGGCATATAGAGTAACAACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512394.5
3UTR CAA 72 bp TATGCTGATCCCAAGTTCAGCTTGTTTCACAATATTTaGCTGCCTTGGTCTTTAACTTTTGATCTCATTAAG +
Preference number: 4 (lower is better)
Translates to: YADPKFSLFHNI*LPWSLTFDLIK
Trigger: CTTAATGAGATCAAAAGTTAAAGACCAAGGCAGCAAAATATTGTGAAACAAGCTGAACTTGGGATCAGCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS TCA 90 bp GCTGGGAAAGCGCCGCTGCAATGCTCGGTTCGGTTCTGGCCCCTCTaGGGATTAGGTCGGCACCCGCGGGCCGCAGGCTGCTCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: AGKAPLQCSVRFWPL*GLGRHPRAAGCSPE
Trigger: CTCAGGAGAGCAGCCTGCGGCCCGCGGGTGCCGACCTAATCCTCAGAGGGGCCAGAACCGAACCGAGCATTGCAGCGGCGCTTTCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS CCA 90 bp GCCCTGCGCTCAGCCCAAGCACATCCCTCTGACAGGCACCGGAGGTaGGGCTCGCGTCACAGGTGTCACCCCAAGACGGTCCTTGCAAAC +
Preference number: 5 (lower is better)
Translates to: ALRSAQAHPSDRHRR*GSRHRCHPKTVLAN
Trigger: GTTTGCAAGGACCGTCTTGGGGTGACACCTGTGACGCGAGCCCCACCTCCGGTGCCTGTCAGAGGGATGTGCTTGGGCTGAGCGCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS TCA 90 bp CGGCTTGAAGAGGAGGACGTGCAAGAGACACCGAGGAAGGCCAGCTaGGCTGGGAAAGCGCCGCTGCAATGCTCGGTTCGGTTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RLEEEDVQETPRKAS*AGKAPLQCSVRFWP
Trigger: GGGCCAGAACCGAACCGAGCATTGCAGCGGCGCTTTCCCAGCTCAGCTGGCCTTCCTCGGTGTCTCTTGCACGTCCTCCTCTTCAAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS GCA 90 bp CCTCAAGAGGAACCAGCAGTCCGTGAAGGGCCATTCCTGGGAAAGTaGACCCATTCGTTCCCCACAGACCCTCGGCCCCTCAGCGCTCAC +
Preference number: 5 (lower is better)
Translates to: PQEEPAVREGPFLGK*THSFPTDPRPLSAH
Trigger: GTGAGCGCTGAGGGGCCGAGGGTCTGTGGGGAACGAATGGGTGCACTTTCCCAGGAATGGCCCTTCACGGACTGCTGGTTCCTCTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS CCA 90 bp AGCAGCTCCCTCAAGAGGAACCAGCAGTCCGTGAAGGGCCATTCCTaGGAAAGTGCACCCATTCGTTCCCCACAGACCCTCGGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: SSSLKRNQQSVKGHS*ESAPIRSPQTLGPS
Trigger: TGAGGGGCCGAGGGTCTGTGGGGAACGAATGGGTGCACTTTCCCAGGAATGGCCCTTCACGGACTGCTGGTTCCTCTTGAGGGAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS TCA 90 bp CTCGGTGGAGGTTTACTGGGATGCAGAGCAAGCCCTTCTCCGGCTTaGAGAGGAGGACGTGCAAGAGACACCGAGGAAGGCCAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LGGGLLGCRASPSPA*RGGRARDTEEGQLS
Trigger: GCTCAGCTGGCCTTCCTCGGTGTCTCTTGCACGTCCTCCTCTTCAAGCCGGAGAAGGGCTTGCTCTGCATCCCAGTAAACCTCCACCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS TCA 90 bp CAGTCCAAATCAGAAGCAGCTCCCTCAAGAGGAACCAGCAGTCCGTaGAGGGCCATTCCTGGGAAAGTGCACCCATTCGTTCCCCACAGA +
Preference number: 5 (lower is better)
Translates to: QSKSEAAPSRGTSSP*RAIPGKVHPFVPHR
Trigger: TCTGTGGGGAACGAATGGGTGCACTTTCCCAGGAATGGCCCTTCACGGACTGCTGGTTCCTCTTGAGGGAGCTGCTTCTGATTTGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR CAA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTCAGCGCTCACTTCATaGCGCTCCCCTGGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: VESSITGTTSKVFLTATISALTS*RSPGSG
Trigger: GCCGCTGCCAGGGGAGCGCAATGAAGTGAGCGCTGA...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR CAA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAACCCCAAGACGGTCCTaGCAAACACGGGGGATGGGG +
Preference number: 5 (lower is better)
Translates to: ESSITGTTSKVFLTATILTPRRS*QTRGMG
Trigger: CCCCATCCCCCGTGTTTGCAAGGACCGTCTTGGGGT...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR CAA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATAAGCCCTTCTCCGGCTaGAAGAGGAGGACGTGCAAG +
Preference number: 5 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNKPFSG*KRRTCK
Trigger: CTTGCACGTCCTCCTCTTCAAGCCGGAGAAGGGCTT...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS-3UTR CAA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCATCTCTTTCCCCTTGTaGCACTTTCGCCTCCCACTC +
Preference number: 5 (lower is better)
Translates to: VESSITGTTSKVFLTATIISFPL*HFRLPL
Trigger: GAGTGGGAGGCGAAAGTGCAACAAGGGGAAAGAGAT...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp TTAACTGCTCTAGGCAGCTCTGAACTTTCCAAGAACTGCCTTAAATCAGGATCCACAGCGTCGGCAGCCTaGTTCACCATCCTCAATATT +
Preference number: 5 (lower is better)
Translates to: LTALGSSELSKNCLKSGSTASAA*FTILNI
Trigger: AATATTGAGGATGGTGAACAAGGCTGCCGACGCTGT...GGATCCTGATTTAAGGCAGTTCTTGGAAAGTTCAGAGCTGCCTAGAGCAGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR CAA 90 bp CAAAGTATTGCAGAATGTCATGCCACAGTCCACTTAATTCAAAGAGGGTCAGGAATCTCTTTCCCCTTGTaGCACTTTCGCCTCCCACTC +
Preference number: 5 (lower is better)
Translates to: QSIAECHATVHLIQRGSGISFPL*HFRLPL
Trigger: GAGTGGGAGGCGAAAGTGCAACAAGGGGAAAGAGAT...TCCTGACCCTCTTTGAATTAAGTGGACTGTGGCATGACATTCTGCAATACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CAA 90 bp ACTGCTCTAGGCAGCTCTGAACTTTCCAAGAACTGCCTTAAATCAGGATCCTGTTCTTCTTTACCCACTTaGACCTTGGTCATCCCTACT +
Preference number: 5 (lower is better)
Translates to: TALGSSELSKNCLKSGSCSSLPT*TLVIPT
Trigger: AGTAGGGATGACCAAGGTCAAAGTGGGTAAAGAAGA...ACAGGATCCTGATTTAAGGCAGTTCTTGGAAAGTTCAGAGCTGCCTAGAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR CAA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTGATTGTCATTTTGTaGACAGCGTCGGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: VESSITGTTSKVFLTATILIVIL*TASAAL
Trigger: CAAGGCTGCCGACGCTGTCAACAAAATGACAATCAA...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCACGGCAACAATCTTATaGCTAGGCAATGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: VESSITGTTSKVFLTATITATIL*LGNGFG
Trigger: GCCAAAGCCATTGCCTAGCAATAAGATTGTTGCCGT...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTGGAGTTTTACCATGTaGGCCAGGCTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: VESSITGTTSKVFLTATIWSFTM*ARLVLN
Trigger: GTTCAAGACTAGCCTGGCCAACATGGTAAAACTCCA...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CAA 90 bp CTTGGTCATCCCTACTATACTCTTTTCTGGAGCTGGTGGCACAATATAACCAACGTGGGTTTTGGGCCATaGGAGTTTGCACTAATATCT +
Preference number: 5 (lower is better)
Translates to: LGHPYYTLFWSWWHNITNVGFGP*EFALIS
Trigger: AGATATTAGTGCAAACTCCAATGGCCCAAAACCCAC...GTTGGTTATATTGTGCCACCAGCTCCAGAAAAGAGTATAGTAGGGATGACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR CAA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTCTTCTTTACCCACTTaGACCTTGGTCATCCCTACT +
Preference number: 5 (lower is better)
Translates to: VESSITGTTSKVFLTATISSLPT*TLVIPT
Trigger: AGTAGGGATGACCAAGGTCAAAGTGGGTAAAGAAGA...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAACAGCGTCGGCAGCCTaGTTCACCATCCTCAATATT +
Preference number: 5 (lower is better)
Translates to: ESSITGTTSKVFLTATILTASAA*FTILNI
Trigger: AATATTGAGGATGGTGAACAAGGCTGCCGACGCTGT...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp CAAAGTATTGCAGAATGTCATGCCACAGTCCACTTAATTCAAAGAGGGTCAGGATTGATTGTCATTTTGTaGACAGCGTCGGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: QSIAECHATVHLIQRGSGLIVIL*TASAAL
Trigger: CAAGGCTGCCGACGCTGTCAACAAAATGACAATCAA...TCCTGACCCTCTTTGAATTAAGTGGACTGTGGCATGACATTCTGCAATACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CAA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATATCTTGATTGTCATTTaGTTGACAGCGTCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNILIVI*LTASAA
Trigger: GGCTGCCGACGCTGTCAACAAAATGACAATCAAGAT...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATGTGGGTTTTGGGCCATaGGAGTTTGCACTAATATCT +
Preference number: 5 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNVGFGP*EFALIS
Trigger: AGATATTAGTGCAAACTCCAATGGCCCAAAACCCAC...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATTCTTCTTTACCCACTTaGACCTTGGTCATCCCTACT +
Preference number: 5 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNSSLPT*TLVIPT
Trigger: AGTAGGGATGACCAAGGTCAAAGTGGGTAAAGAAGA...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAACGGCAACAATCTTATaGCTAGGCAATGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: ESSITGTTSKVFLTATILTATIL*LGNGFG
Trigger: GCCAAAGCCATTGCCTAGCAATAAGATTGTTGCCGT...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATACATGGTACCATTCCTaGTCAACTGTGAGCACAGAT +
Preference number: 5 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNTWYHS*STVSTD
Trigger: ATCTGTGCTCACAGTTGACAAGGAATGGTACCATGT...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CAA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAAATCTTGATTGTCATTTaGTTGACAGCGTCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQILIVI*LTASAA
Trigger: GGCTGCCGACGCTGTCAACAAAATGACAATCAAGAT...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CAA 90 bp TCTGAACTTTCCAAGAACTGCCTTAAATCAGGATCCTGTAGTAAAGTTGGATGTATCTTGATTGTCATTTaGTTGACAGCGTCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SELSKNCLKSGSCSKVGCILIVI*LTASAA
Trigger: GGCTGCCGACGCTGTCAACAAAATGACAATCAAGAT...ACATCCAACTTTACTACAGGATCCTGATTTAAGGCAGTTCTTGGAAAGTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR CAA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTAGCAAAGGCAGCTGTGTaGGCTGAAAGTTCTTTTCTA +
Preference number: 5 (lower is better)
Translates to: ESSITGTTSKVFLTATILAKAAV*AESSFL
Trigger: TAGAAAAGAACTTTCAGCCAACACAGCTGCCTTTGC...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAAAAAATCTCTTTCCCCTaGTTGCACTTTCGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQKISFP*LHFRLP
Trigger: TGGGAGGCGAAAGTGCAACAAGGGGAAAGAGATTTT...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CAA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTAAAATCTCTTTCCCCTaGTTGCACTTTCGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLIKISFP*LHFRLP
Trigger: TGGGAGGCGAAAGTGCAACAAGGGGAAAGAGATTTT...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCGATCCCAAGTTCAGCTaGTTTCACAATATTTTGCTG +
Preference number: 5 (lower is better)
Translates to: VESSITGTTSKVFLTATIDPKFS*FHNILL
Trigger: CAGCAAAATATTGTGAAACAAGCTGAACTTGGGATC...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CAA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCGTCTGAAGCAACAGTaGGAAGAAATAAGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNRLKQQ*EEISSL
Trigger: CAGAGAACTTATTTCTTCCAACTGTTGCTTCAGACG...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CAA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTGTGGGTTTTGGGCCATaGGAGTTTGCACTAATATCT +
Preference number: 5 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLIVGFGP*EFALIS
Trigger: AGATATTAGTGCAAACTCCAATGGCCCAAAACCCAC...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTGGAAAGAGATGTCTTaGTTGTTACTCTATATGCCA +
Preference number: 5 (lower is better)
Translates to: VESSITGTTSKVFLTATIWKEMS*LLLYMP
Trigger: TGGCATATAGAGTAACAACAAAGACATCTCTTTCCA...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp GTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCCCAACATGTAAATATTaGCTTGCTAATTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: VESSITGTTSKVFLTATIPTCKY*LANLLC
Trigger: GCACAGCAAATTAGCAAGCAAATATTTACATGTTGG...GATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp CTTTGTTGTTACTCTATATGCCATATAGGCATTCATGCCATCACCAACTTTTTCTTGATTGTCATTTTGTaGACAGCGTCGGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: LCCYSICHIGIHAITNFFLIVIL*TASAAL
Trigger: CAAGGCTGCCGACGCTGTCAACAAAATGACAATCAA...GAAAAAGTTGGTGATGGCATGAATGCCTATATGGCATATAGAGTAACAACAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR CAA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAAGCAAAGGCAGCTGTGTaGGCTGAAAGTTCTTTTCTA +
Preference number: 5 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQAKAAV*AESSFL
Trigger: TAGAAAAGAACTTTCAGCCAACACAGCTGCCTTTGC...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CAA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATTTCTGTGTATTCACCTaGACTGGCTTCAGTTACAAA +
Preference number: 5 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNFCVFT*TGFSYK
Trigger: TTTGTAACTGAAGCCAGTCAAGGTGAATACACAGAA...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CAA 90 bp CTTGGTCATCCCTACTATACTCTTTTCTGGAGCTGGTGGCACAATATAACCAACCAAAAATGTCTCCATTaGCTTCTTCTTCAATCTGCA +
Preference number: 5 (lower is better)
Translates to: LGHPYYTLFWSWWHNITNQKCLH*LLLQSA
Trigger: TGCAGATTGAAGAAGAAGCAAATGGAGACATTTTTG...GTTGGTTATATTGTGCCACCAGCTCCAGAAAAGAGTATAGTAGGGATGACCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR CAA 90 bp TGTGGAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCAGTTTACTTCAAATTaGCTTTGTGTTGTGCTTGCT +
Preference number: 5 (lower is better)
Translates to: CGIQHNWNNIQGLLNGNNQFTSN*LCVVLA
Trigger: AGCAAGCACAACACAAAGCAAATTTGAAGTAAACTG...ATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTCCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CAA 90 bp CAAAGTATTGCAGAATGTCATGCCACAGTCCACTTAATTCAAAGAGGGTCAGGATACACATACCATATCTaGTTCCTATGGAAGGGATAT +
Preference number: 5 (lower is better)
Translates to: QSIAECHATVHLIQRGSGYTYHI*FLWKGY
Trigger: ATATCCCTTCCATAGGAACAAGATATGGTATGTGTA...TCCTGACCCTCTTTGAATTAAGTGGACTGTGGCATGACATTCTGCAATACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CAA 90 bp GAATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTACCAACATGTAAATATTaGCTTGCTAATTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: ESSITGTTSKVFLTATILPTCKY*LANLLC
Trigger: GCACAGCAAATTAGCAAGCAAATATTTACATGTTGG...TAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAAAAATTATACCTGCCCTaGAGAGTAACAACTAGGAGT +
Preference number: 5 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQKLYLP*RVTTRS
Trigger: ACTCCTAGTTGTTACTCTCAAGGGCAGGTATAATTT...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CAA 90 bp GATAGTAAACTACAGCTTCCCTATCTTCTACAATCTTATCAGCGTCTGAAGCAAATGAAGTTTCCTAAGTaGCTGATCCAGATTCTCAAA +
Preference number: 5 (lower is better)
Translates to: DSKLQLPYLLQSYQRLKQMKFPK*LIQILK
Trigger: TTTGAGAATCTGGATCAGCAACTTAGGAAACTTCAT...TTGCTTCAGACGCTGATAAGATTGTAGAAGATAGGGAAGCTGTAGTTTACTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379516.7
CDS-3UTR CAA 90 bp ATCCAGCATAACTGGAACAACATCCAAGGTCTTCTTAACGGCAACAATCTTATTATGAAGTTTCCTAAGTaGCTGATCCAGATTCTCAAA +
Preference number: 5 (lower is better)
Translates to: IQHNWNNIQGLLNGNNLIMKFPK*LIQILK
Trigger: TTTGAGAATCTGGATCAGCAACTTAGGAAACTTCAT...AATAAGATTGTTGCCGTTAAGAAGACCTTGGATGTTGTTCCAGTTATGCTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379516.7
ENST00000514949.1
CDS-3UTR CAA 90 bp TCCAAGAACTGCCTTAAATCAGGATCCTGTAGTAAAGTTGGATGTTTTACTGTTTGGAAAGAGATGTCTTaGTTGTTACTCTATATGCCA +
Preference number: 5 (lower is better)
Translates to: SKNCLKSGSCSKVGCFTVWKEMS*LLLYMP
Trigger: TGGCATATAGAGTAACAACAAAGACATCTCTTTCCA...AACAGTAAAACATCCAACTTTACTACAGGATCCTGATTTAAGGCAGTTCTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS-3UTR CAA 90 bp TTGTTGTTACTCTATATGCCATATAGGCATTCATGCCATCACCAACTTTTTCTGCCAACATGTAAATATTaGCTTGCTAATTTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: LLLLYMPYRHSCHHQLFLPTCKY*LANLLC
Trigger: GCACAGCAAATTAGCAAGCAAATATTTACATGTTGG...CAGAAAAAGTTGGTGATGGCATGAATGCCTATATGGCATATAGAGTAACAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512394.5
CDS TCA 72 bp GCGCCGCTGCAATGCTCGGTTCGGTTCTGGCCCCTCTaGGGATTAGGTCGGCACCCGCGGGCCGCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: APLQCSVRFWPL*GLGRHPRAAGC
Trigger: GCAGCCTGCGGCCCGCGGGTGCCGACCTAATCCTCAGAGGGGCCAGAACCGAACCGAGCATTGCAGCGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS CCA 72 bp TCAGCCCAAGCACATCCCTCTGACAGGCACCGGAGGTaGGGCTCGCGTCACAGGTGTCACCCCAAGACGGTC +
Preference number: 6 (lower is better)
Translates to: SAQAHPSDRHRR*GSRHRCHPKTV
Trigger: GACCGTCTTGGGGTGACACCTGTGACGCGAGCCCCACCTCCGGTGCCTGTCAGAGGGATGTGCTTGGGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS TCA 72 bp GAGGAGGACGTGCAAGAGACACCGAGGAAGGCCAGCTaGGCTGGGAAAGCGCCGCTGCAATGCTCGGTTCGG +
Preference number: 6 (lower is better)
Translates to: EEDVQETPRKAS*AGKAPLQCSVR
Trigger: CCGAACCGAGCATTGCAGCGGCGCTTTCCCAGCTCAGCTGGCCTTCCTCGGTGTCTCTTGCACGTCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS GCA 72 bp CACCGAGGAAGGCCAGCTGAGCTGGGAAAGCGCCGCTaGAATGCTCGGTTCGGTTCTGGCCCCTCTGAGGAT +
Preference number: 6 (lower is better)
Translates to: HRGRPAELGKRR*NARFGSGPSED
Trigger: ATCCTCAGAGGGGCCAGAACCGAACCGAGCATTGCAGCGGCGCTTTCCCAGCTCAGCTGGCCTTCCTCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS CCA 72 bp ACAGGTCCTCTCCGTCCTCCAGATCCTCAAAGTCGGTaGGCTTCCCGTCCCCCAGCGGAGGAGGTTCCCTCT +
Preference number: 6 (lower is better)
Translates to: TGPLRPPDPQSR*ASRPPAEEVPS
Trigger: AGAGGGAACCTCCTCCGCTGGGGGACGGGAAGCCCACCGACTTTGAGGATCTGGAGGACGGAGAGGACCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379516.7
ENST00000505854.5
ENST00000505934.5
ENST00000506874.1
ENST00000512394.5
CDS GCA 72 bp GAACCAGCAGTCCGTGAAGGGCCATTCCTGGGAAAGTaGACCCATTCGTTCCCCACAGACCCTCGGCCCCTC +
Preference number: 6 (lower is better)
Translates to: EPAVREGPFLGK*THSFPTDPRPL
Trigger: GAGGGGCCGAGGGTCTGTGGGGAACGAATGGGTGCACTTTCCCAGGAATGGCCCTTCACGGACTGCTGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS CCA 72 bp GGACGTGCAAGAGACACCGAGGAAGGCCAGCTGAGCTaGGAAAGCGCCGCTGCAATGCTCGGTTCGGTTCTG +
Preference number: 6 (lower is better)
Translates to: GRARDTEEGQLS*ESAAAMLGSVL
Trigger: CAGAACCGAACCGAGCATTGCAGCGGCGCTTTCCCAGCTCAGCTGGCCTTCCTCGGTGTCTCTTGCACGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS GCA 72 bp CAGAGCAAGCCCTTCTCCGGCTTGAAGAGGAGGACGTaGAAGAGACACCGAGGAAGGCCAGCTGAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: QSKPFSGLKRRT*KRHRGRPAELG
Trigger: TCCCAGCTCAGCTGGCCTTCCTCGGTGTCTCTTGCACGTCCTCCTCTTCAAGCCGGAGAAGGGCTTGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS CAA 90 bp GCTCGGTGGAGGTTTACTGGGATGCAGAGCAAGCCCTTCTCCGGCTaGAAGAGGAGGACGTGCAAGAGACACCGAGGAAGGCCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: ARWRFTGMQSKPFSG*KRRTCKRHRGRPAE
Trigger: CTCAGCTGGCCTTCCTCGGTGTCTCTTGCACGTCCTCCTCTTCAAGCCGGAGAAGGGCTTGCTCTGCATCCCAGTAAACCTCCACCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS CCA 72 bp CTCAAGAGGAACCAGCAGTCCGTGAAGGGCCATTCCTaGGAAAGTGCACCCATTCGTTCCCCACAGACCCTC +
Preference number: 6 (lower is better)
Translates to: LKRNQQSVKGHS*ESAPIRSPQTL
Trigger: GAGGGTCTGTGGGGAACGAATGGGTGCACTTTCCCAGGAATGGCCCTTCACGGACTGCTGGTTCCTCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS CAA 72 bp AGGTTTACTGGGATGCAGAGCAAGCCCTTCTCCGGCTaGAAGAGGAGGACGTGCAAGAGACACCGAGGAAGG +
Preference number: 6 (lower is better)
Translates to: RFTGMQSKPFSG*KRRTCKRHRGR
Trigger: CCTTCCTCGGTGTCTCTTGCACGTCCTCCTCTTCAAGCCGGAGAAGGGCTTGCTCTGCATCCCAGTAAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS TCA 72 bp TCAGAAGCAGCTCCCTCAAGAGGAACCAGCAGTCCGTaGAGGGCCATTCCTGGGAAAGTGCACCCATTCGTT +
Preference number: 6 (lower is better)
Translates to: SEAAPSRGTSSP*RAIPGKVHPFV
Trigger: AACGAATGGGTGCACTTTCCCAGGAATGGCCCTTCACGGACTGCTGGTTCCTCTTGAGGGAGCTGCTTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514949.1
CDS CAA 72 bp GACCAAGGCTTCAACACTGACATGAAGTTTCCTAAGTaGCTGATCCAGATTCTCAAATTGCTGCTGCTTTTC +
Preference number: 6 (lower is better)
Translates to: DQGFNTDMKFPK*LIQILKLLLLF
Trigger: GAAAAGCAGCAGCAATTTGAGAATCTGGATCAGCAACTTAGGAAACTTCATGTCAGTGTTGAAGCCTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379516.7
ENST00000506847.5
ENST00000510372.5
ENST00000514030.1
ENST00000514949.1
CDS CAA 90 bp TCTATGACAGACCAAGGCTTCAACACTGACATGAAGTTTCCTAAGTaGCTGATCCAGATTCTCAAATTGCTGCTGCTTTTCTTCAAACCA +
Preference number: 6 (lower is better)
Translates to: SMTDQGFNTDMKFPK*LIQILKLLLLFFKP
Trigger: TGGTTTGAAGAAAAGCAGCAGCAATTTGAGAATCTGGATCAGCAACTTAGGAAACTTCATGTCAGTGTTGAAGCCTTGGTCTGTCATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379516.7
ENST00000506847.5
ENST00000510372.5
ENST00000514030.1
ENST00000514949.1