Pregenerated sensors for SNX18 (Homo sapiens)
Ensembl gene IDs: ENSG00000178996Ensembl transcript IDs: ENST00000326277.5, ENST00000343017.11, ENST00000381410.5
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTCCCTGCTCAGGAGTAGGTTTCCCTGCCCAGCCGCCCCTACACTaGACTTTCACAGGCAAGACTGCCTCCCTAACTCCCACACCTCCC | + |
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Preference number: 1 (lower is better) Translates to: FPCSGVGFPAQPPLH*TFTGKTASLTPTPP Trigger: GGGAGGTGTGGGAGTTAGGGAGGCAGTCTTGCCTGTGAAAGTCCAGTGTAGGGGCGGCTGGGCAGGGAAACCTACTCCTGAGCAGGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR TCA 90 bp | CACCAGAAAGGCAGTGAGCACTTCACCAGTAAAGGCCAGACCCGCTaGGGAAACAGGGACAGTAGGTTTCCCTGCTCAGGAGTAGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: HQKGSEHFTSKGQTR*GNRDSRFPCSGVGF Trigger: GAAACCTACTCCTGAGCAGGGAAACCTACTGTCCCTGTTTCCTCAGCGGGTCTGGCCTTTACTGGTGAAGTGCTCACTGCCTTTCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR TCA 90 bp | AGTACTGATGTCCAGGGTACTCCCTTTCAGCGGCAGCAACAAGACTaGAAACGTTTGATCATTCTCCCAGCAAGCCCCTTCCCCCATAGG | + |
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Preference number: 1 (lower is better) Translates to: STDVQGTPFQRQQQD*KRLIILPASPFPHR Trigger: CCTATGGGGGAAGGGGCTTGCTGGGAGAATGATCAAACGTTTTCAGTCTTGTTGCTGCCGCTGAAAGGGAGTACCCTGGACATCAGTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR CCA 90 bp | TCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTaGACGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTC | + |
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Preference number: 1 (lower is better) Translates to: SLILGANWVPSDTTA*TGNKITTHGCRTSL Trigger: GAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCGTCCAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR CCA 90 bp | CGTGCACTGGCTTTACATTTCACTTTTGAATGCGTTCCCTCATCCTaGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGGACGGGGA | + |
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Preference number: 1 (lower is better) Translates to: RALALHFTFECVPSS*VQTGYLQIQQLGRG Trigger: TCCCCGTCCAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTCAAAAGTGAAATGTAAAGCCAGTGCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR GCA 90 bp | CACTGGCTTTACATTTCACTTTTGAATGCGTTCCCTCATCCTGGGTaGAAACTGGGTACCTTCAGATACAACAGCTTGGACGGGGAACAA | + |
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Preference number: 1 (lower is better) Translates to: HWLYISLLNAFPHPG*KLGTFRYNSLDGEQ Trigger: TTGTTCCCCGTCCAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTCAAAAGTGAAATGTAAAGCCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR GCA 90 bp | AGACAATCAAGGGAGGCAAACTTCAGTTCAATACAAGAAAAGACATaGCAGAGATCAGGGTTGCTCATAAACGGACTGGCCCACCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: RQSREANFSSIQEKT*QRSGLLINGLAHQK Trigger: TTTCTGGTGGGCCAGTCCGTTTATGAGCAACCCTGATCTCTGGCATGTCTTTTCTTGTATTGAACTGAAGTTTGCCTCCCTTGATTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR CCA 90 bp | TCAGTGAAGCCTGGGAAAATCTCAATTACTATAATATTCGTGCACTaGCTTTACATTTCACTTTTGAATGCGTTCCCTCATCCTGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: SVKPGKISITIIFVH*LYISLLNAFPHPGC Trigger: GCACCCAGGATGAGGGAACGCATTCAAAAGTGAAATGTAAAGCCAGTGCACGAATATTATAGTAATTGAGATTTTCCCAGGCTTCACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR GCA 90 bp | AATTACTATAATATTCGTGCACTGGCTTTACATTTCACTTTTGAATaGGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAA | + |
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Preference number: 1 (lower is better) Translates to: NYYNIRALALHFTFE*VPSSWVQTGYLQIQ Trigger: TTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTCAAAAGTGAAATGTAAAGCCAGTGCACGAATATTATAGTAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR TCA 90 bp | TTCTATTTACAGACATCCGTTCTTCTCCATTATTTCCTCACTTTTTaGAACTCACCACTAAGTGACAGTGCAGTGTTCAAACAGATACCT | + |
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Preference number: 1 (lower is better) Translates to: FYLQTSVLLHYFLTF*NSPLSDSAVFKQIP Trigger: AGGTATCTGTTTGAACACTGCACTGTCACTTAGTGGTGAGTTTCAAAAAGTGAGGAAATAATGGAGAAGAACGGATGTCTGTAAATAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCAAATGTCTGAAGGCGGTCCCAGGGAACAGAAAGACAATCAAGGGAGGCAAAGGCCAGACCCGCTaGGGAAACAGGGACAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: VSKCLKAVPGNRKTIKGGKGQTR*GNRDSR Trigger: CCTACTGTCCCTGTTTCCTCAGCGGGTCTGGCCTTT...GCCTCCCTTGATTGTCTTTCTGTTCCCTGGGACCGCCTTCAGACATTTGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR-3UTR TCA 90 bp | GAATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTCAAATTGATGACAGCTaGTCGTCCCACCCCACCGCC | + |
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Preference number: 2 (lower is better) Translates to: ECVPSSWVQTGYLQIQQLQIDDS*SSHPTA Trigger: GGCGGTGGGGTGGGACGATCAGCTGTCATCAATTTG...AAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR-3UTR GCA 90 bp | ATTCTCCCAGCAAGCCCCTTCCCCCATAGGAGTCAGAAGACCAGTCACGCATTTGACAGTAGGTTTCCCTaGTCAGGAGTAGGTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: ILPASPFPHRSQKTSHAFDSRFP*SGVGFP Trigger: AGGGAAACCTACTCCTGAGCAGGGAAACCTACTGTC...AAATGCGTGACTGGTCTTCTGACTCCTATGGGGGAAGGGGCTTGCTGGGAGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR-3UTR GCA 90 bp | ATTCTCCCAGCAAGCCCCTTCCCCCATAGGAGTCAGAAGACCAGTCACGCATTTTCACTTCGTAAAGGTTaGAGGCAAGAATTCTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: ILPASPFPHRSQKTSHAFSLRKG*RQEFFA Trigger: TGCAAAGAATTCTTGCCTGCAACCTTTACGAAGTGA...AAATGCGTGACTGGTCTTCTGACTCCTATGGGGGAAGGGGCTTGCTGGGAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR-3UTR GCA 90 bp | GAATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTAAAACCAGGCTCAAGTaGACACCCTGTGTTACAAAC | + |
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Preference number: 2 (lower is better) Translates to: ECVPSSWVQTGYLQIQQLKTRLK*TPCVTN Trigger: GTTTGTAACACAGGGTGTGCACTTGAGCCTGGTTTT...AAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCAAATGTCTGAAGGCGGTCCCAGGGAACAGAAAGACAATCAAGGGAGGCTATTTCCTCACTTTTTaGAACTCACCACTAAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: VSKCLKAVPGNRKTIKGGYFLTF*NSPLSD Trigger: GTCACTTAGTGGTGAGTTTCAAAAAGTGAGGAAATA...GCCTCCCTTGATTGTCTTTCTGTTCCCTGGGACCGCCTTCAGACATTTGGAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR-3UTR TCA 90 bp | TGCCAAGAAAGTTACTACTGTCTACTAAAATTAGTACTGATGTCCAGGGTACTCCTGTCTCCAAATGTCTaGAGGCGGTCCCAGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: CQESYYCLLKLVLMSRVLLSPNV*RRSQGT Trigger: TGTTCCCTGGGACCGCCTTCAGACATTTGGAGACAG...GAGTACCCTGGACATCAGTACTAATTTTAGTAGACAGTAGTAACTTTCTTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR-3UTR CCA 90 bp | GTGGAAATGAGAAAATTGAATGCTTATGGACTTAAAGGTATCAGACATGGCATTTGCGTTCCCTCATCCTaGGTGCAAACTGGGTACCTT | + |
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Preference number: 2 (lower is better) Translates to: VEMRKLNAYGLKGIRHGICVPSS*VQTGYL Trigger: AAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCA...AATGCCATGTCTGATACCTTTAAGTCCATAAGCATTCAATTTTCTCATTTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR CAA 90 bp | ATCTCAATTACTATAATATTCGTGCACTGGCTTTACATTTCACTTTaGAATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: ISITIIFVHWLYISL*NAFPHPGCKLGTFR Trigger: TCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTCAAAAGTGAAATGTAAAGCCAGTGCACGAATATTATAGTAATTGAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR-3UTR TCA 90 bp | GGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGATTATATTCATTCTATAGAGGTGTGGAAGGGTaGAAGCAGATTTCTATTTAC | + |
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Preference number: 2 (lower is better) Translates to: GIPATLLSDPILRLYSFYRGVEG*KQISIY Trigger: GTAAATAGAAATCTGCTTTCACCCTTCCACACCTCT...ATAGAATGAATATAATCTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR-3UTR GCA 90 bp | TGCCAAGAAAGTTACTACTGTCTACTAAAATTAGTACTGATGTCCAGGGTACTCATACAAGAAAAGACATaGCAGAGATCAGGGTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: CQESYYCLLKLVLMSRVLIQEKT*QRSGLL Trigger: GAGCAACCCTGATCTCTGGCATGTCTTTTCTTGTAT...GAGTACCCTGGACATCAGTACTAATTTTAGTAGACAGTAGTAACTTTCTTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR-3UTR GCA 90 bp | AACTTCAGTTCAATACAAGAAAAGACATGCCAGAGATCAGGGTTGCTCATAAACATTTGCAAATTCTGGTaGTTTAGCAAAGGTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: NFSSIQEKTCQRSGLLINICKFW*FSKGQR Trigger: TCTCTGACCTTTGCTAAAGCACCAGAATTTGCAAAT...GTTTATGAGCAACCCTGATCTCTGGCATGTCTTTTCTTGTATTGAACTGAAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR-3UTR CCA 90 bp | AAGGGTGAAAGCAGATTTCTATTTACAGACATCCGTTCTTCTCCATTATTTCCTAACAGATACCTAACATaGTTTAGGTCCCCTTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: KGESRFLFTDIRSSPLFPNRYLT*FRSPSN Trigger: ATTAGAAGGGGACCTAAACCATGTTAGGTATCTGTT...AGGAAATAATGGAGAAGAACGGATGTCTGTAAATAGAAATCTGCTTTCACCCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR-3UTR CCA 90 bp | TGCCAAGAAAGTTACTACTGTCTACTAAAATTAGTACTGATGTCCAGGGTACTCTTAATTTGCAAATTCTaGTGCTTTAGCAAAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: CQESYYCLLKLVLMSRVLLICKF*CFSKGQ Trigger: CTGACCTTTGCTAAAGCACCAGAATTTGCAAATTAA...GAGTACCCTGGACATCAGTACTAATTTTAGTAGACAGTAGTAACTTTCTTGGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR-3UTR CCA 90 bp | GTGGAAATGAGAAAATTGAATGCTTATGGACTTAAAGGTATCAGACATGGCATTTGTATCAGTGAAGCCTaGGAAAATCTCAATTACTAT | + |
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Preference number: 2 (lower is better) Translates to: VEMRKLNAYGLKGIRHGICISEA*ENLNYY Trigger: ATAGTAATTGAGATTTTCCCAGGCTTCACTGATACA...AATGCCATGTCTGATACCTTTAAGTCCATAAGCATTCAATTTTCTCATTTCCAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR CCA 72 bp | TCAGGAGTAGGTTTCCCTGCCCAGCCGCCCCTACACTaGACTTTCACAGGCAAGACTGCCTCCCTAACTCCC | + |
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Preference number: 3 (lower is better) Translates to: SGVGFPAQPPLH*TFTGKTASLTP Trigger: GGGAGTTAGGGAGGCAGTCTTGCCTGTGAAAGTCCAGTGTAGGGGCGGCTGGGCAGGGAAACCTACTCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR TCA 72 bp | GGCAGTGAGCACTTCACCAGTAAAGGCCAGACCCGCTaGGGAAACAGGGACAGTAGGTTTCCCTGCTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: GSEHFTSKGQTR*GNRDSRFPCSG Trigger: TCCTGAGCAGGGAAACCTACTGTCCCTGTTTCCTCAGCGGGTCTGGCCTTTACTGGTGAAGTGCTCACTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR TCA 72 bp | GTCCAGGGTACTCCCTTTCAGCGGCAGCAACAAGACTaGAAACGTTTGATCATTCTCCCAGCAAGCCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: VQGTPFQRQQQD*KRLIILPASPF Trigger: GAAGGGGCTTGCTGGGAGAATGATCAAACGTTTTCAGTCTTGTTGCTGCCGCTGAAAGGGAGTACCCTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR CCA 72 bp | CTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTaGACGGGGAACAAGATTACGACACATGGCTGTAGA | + |
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Preference number: 3 (lower is better) Translates to: LGANWVPSDTTA*TGNKITTHGCR Trigger: TCTACAGCCATGTGTCGTAATCTTGTTCCCCGTCCAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR GCA 72 bp | TACATTTCACTTTTGAATGCGTTCCCTCATCCTGGGTaGAAACTGGGTACCTTCAGATACAACAGCTTGGAC | + |
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Preference number: 3 (lower is better) Translates to: YISLLNAFPHPG*KLGTFRYNSLD Trigger: GTCCAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTCAAAAGTGAAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR GCA 72 bp | AATATTCGTGCACTGGCTTTACATTTCACTTTTGAATaGGTTCCCTCATCCTGGGTGCAAACTGGGTACCTT | + |
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Preference number: 3 (lower is better) Translates to: NIRALALHFTFE*VPSSWVQTGYL Trigger: AAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTCAAAAGTGAAATGTAAAGCCAGTGCACGAATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR CCA 72 bp | GCTTTACATTTCACTTTTGAATGCGTTCCCTCATCCTaGGTGCAAACTGGGTACCTTCAGATACAACAGCTT | + |
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Preference number: 3 (lower is better) Translates to: ALHFTFECVPSS*VQTGYLQIQQL Trigger: AAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTCAAAAGTGAAATGTAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR GCA 72 bp | AGTTGGACAGCTAACTCACTGGGATACCAGCAACGCTaGTCTCAGATCCAATACTCAGATTATATTCATTCT | + |
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Preference number: 3 (lower is better) Translates to: SWTANSLGYQQR*SQIQYSDYIHS Trigger: AGAATGAATATAATCTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCCAGTGAGTTAGCTGTCCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR TCA 72 bp | CAGACATCCGTTCTTCTCCATTATTTCCTCACTTTTTaGAACTCACCACTAAGTGACAGTGCAGTGTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: QTSVLLHYFLTF*NSPLSDSAVFK Trigger: TTTGAACACTGCACTGTCACTTAGTGGTGAGTTTCAAAAAGTGAGGAAATAATGGAGAAGAACGGATGTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| 3UTR GCA 72 bp | ACTCTGTCTAATAAAAACAGTAAAACCAGGCTCAAGTaGACACCCTGTGTTACAAACACATCACATATCAGG | + |
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Preference number: 3 (lower is better) Translates to: TLSNKNSKTRLK*TPCVTNTSHIR Trigger: CCTGATATGTGATGTGTTTGTAACACAGGGTGTGCACTTGAGCCTGGTTTTACTGTTTTTATTAGACAGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR CCA 72 bp | CCTGGGAAAATCTCAATTACTATAATATTCGTGCACTaGCTTTACATTTCACTTTTGAATGCGTTCCCTCAT | + |
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Preference number: 3 (lower is better) Translates to: PGKISITIIFVH*LYISLLNAFPH Trigger: ATGAGGGAACGCATTCAAAAGTGAAATGTAAAGCCAGTGCACGAATATTATAGTAATTGAGATTTTCCCAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR TCA 90 bp | TTTCCCTGCTCAGGAGTAGGTTTCCCTGCCCAGCCGCCCCTACACTGGACTTTCCTGGGTTCTCCGACCTaGAGTCGTACAGCGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: FPCSGVGFPAQPPLHWTFLGSPT*SRTAPG Trigger: CCCGGGCGCTGTACGACTTCAGGTCGGAGAACCCAG...GAAAGTCCAGTGTAGGGGCGGCTGGGCAGGGAAACCTACTCCTGAGCAGGGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR TCA 90 bp | ATTCTCCCAGCAAGCCCCTTCCCCCATAGGAGTCAGAAGACCAGTCACGCATTTGGTCGCCGCGGCTGTTaGCCCCCTCGAGCCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: ILPASPFPHRSQKTSHAFGRRGC*PPRASP Trigger: AGGGCTGGCTCGAGGGGGTCAACAGCCGCGGCGACC...AAATGCGTGACTGGTCTTCTGACTCCTATGGGGGAAGGGGCTTGCTGGGAGAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR GCA 90 bp | ATTCTCCCAGCAAGCCCCTTCCCCCATAGGAGTCAGAAGACCAGTCACGCATTTGCGGTAGCGGCCGGCTaGGCCCACACCCGCCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: ILPASPFPHRSQKTSHAFAVAAG*AHTRRR Trigger: TCTTCGGCGGGTGTGGGCGCAGCCGGCCGCTACCGC...AAATGCGTGACTGGTCTTCTGACTCCTATGGGGGAAGGGGCTTGCTGGGAGAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR GCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTGCGGCAAACCCACGCTaGCCGGACCAGCCGGTCGCG | + |
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Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSAANPR*PDQPVA Trigger: CGCGACCGGCTGGTCCGGGCAGCGTGGGTTTGCCGC...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CCA 90 bp | ATTCTCCCAGCAAGCCCCTTCCCCCATAGGAGTCAGAAGACCAGTCACGCATTTACAGGTCGGAGCGCGTaGACAGGCGGTAGCGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: ILPASPFPHRSQKTSHAFTGRSA*TGGSGR Trigger: CCGGCCGCTACCGCCTGTCCACGCGCTCCGACCTGT...AAATGCGTGACTGGTCTTCTGACTCCTATGGGGGAAGGGGCTTGCTGGGAGAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR CCA 90 bp | ATTCTCCCAGCAAGCCCCTTCCCCCATAGGAGTCAGAAGACCAGTCACGCATTTCGGTGGCCGAGCTCTTaGGCCCCGACGGGTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: ILPASPFPHRSQKTSHAFRWPSS*APTGGA Trigger: AGCACCACCCGTCGGGGCCCAAGAGCTCGGCCACCG...AAATGCGTGACTGGTCTTCTGACTCCTATGGGGGAAGGGGCTTGCTGGGAGAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR TCA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGGAGCCGAGGCCCACCTaGGGGGCCCGCGGTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLEPRPT*GARGTA Trigger: AGCAGTACCGCGGGCCCCTCAGGTGGGCCTCGGCTC...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR GCA 90 bp | GGACAGCTAACTCACTGGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGCCGGGTATGCTCCGCTaGCCAGAGCGCCCGGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: GQLTHWDTSNAALRSNTQPGMLR*PERPAR Trigger: ACGAGCCGGGCGCTCTGGGCAGCGGAGCATACCCGG...CTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCCAGTGAGTTAGCTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR CCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTCCCTGGCGCGCGGACTaGAGCCCCGAAGGCGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSPWRAD*SPEGGK Trigger: TTTGCCGCCTTCGGGGCTCCAGTCCGCGCGCCAGGG...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTGTACTGCTCGAGCCCTaGCGCGCGGACTGGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSVLLEP*RADWSP Trigger: GGGGCTCCAGTCCGCGCGCCAGGGCTCGAGCAGTAC...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTCGGTGGCCGAGCTCTTaGGCCCCGACGGGTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSRWPSS*APTGGA Trigger: AGCACCACCCGTCGGGGCCCAAGAGCTCGGCCACCG...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR GCA 90 bp | AGGCGGTCCCAGGGAACAGAAAGACAATCAAGGGAGGCAAACTTCAGTTCAATACGGGCGGCTGGAAGGTaGTCGGAGGCGGCGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RRSQGTERQSREANFSSIRAAGR*SEAAPA Trigger: AGCAGGCGCCGCCTCCGAGCACCTTCCAGCCGCCCG...TATTGAACTGAAGTTTGCCTCCCTTGATTGTCTTTCTGTTCCCTGGGACCGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR GCA 90 bp | GAATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTCCGGGTATGCTCCGCTaGCCAGAGCGCCCGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ECVPSSWVQTGYLQIQQLPGMLR*PERPAR Trigger: ACGAGCCGGGCGCTCTGGGCAGCGGAGCATACCCGG...AAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR GCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTGTCGAGGTCCGGGTATaGTCCGCTGCCCAGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSVEVRV*SAAQSA Trigger: GGCGCTCTGGGCAGCGGAGCATACCCGGACCTCGAC...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR GCA 90 bp | GGACAGCTAACTCACTGGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGCGATGCACCGGCACCTaGGTGTGCGTGGGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQLTHWDTSNAALRSNTQRCTGT*VCVGTS Trigger: GCTGGTGCCCACGCACACGCAGGTGCCGGTGCATCG...CTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCCAGTGAGTTAGCTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR GCA 90 bp | TTTCCCTGCTCAGGAGTAGGTTTCCCTGCCCAGCCGCCCCTACACTGGACTTTCTTGAAGCCGGTCACCTaGTTGCGCGCGAACTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FPCSGVGFPAQPPLHWTFLKPVT*LRANSL Trigger: CAACGAGTTCGCGCGCAAGCAGGTGACCGGCTTCAA...GAAAGTCCAGTGTAGGGGCGGCTGGGCAGGGAAACCTACTCCTGAGCAGGGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR TCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTCTGGGTTCTCCGACCTaGAGTCGTACAGCGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSLGSPT*SRTAPG Trigger: CCCGGGCGCTGTACGACTTCAGGTCGGAGAACCCAG...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR GCA 90 bp | GGACAGCTAACTCACTGGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGAGCCGGTCACCTGCTTaGGCGCGAACTCGTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GQLTHWDTSNAALRSNTQSRSPA*ARTRWP Trigger: CGGCCAACGAGTTCGCGCGCAAGCAGGTGACCGGCT...CTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCCAGTGAGTTAGCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR GCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTAGCCGGTCACCTGCTTaGGCGCGAACTCGTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSSRSPA*ARTRWP Trigger: CGGCCAACGAGTTCGCGCGCAAGCAGGTGACCGGCT...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR GCA 90 bp | GGACAGCTAACTCACTGGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGACGGGATCCAGGTCCTaGCTGGGCTGCTCCGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GQLTHWDTSNAALRSNTQTGSRS*LGCSAK Trigger: CTTCGCGGAGCAGCCCAGGCAGGACCTGGATCCCGT...CTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCCAGTGAGTTAGCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR CCA 90 bp | GAGACTGCTGTCTCCAAATGTCTGAAGGCGGTCCCAGGGAACAGAAAGACAATCGCTCGTCCGCCACCGTaGAGCTGTCGTCCCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ETAVSKCLKAVPGNRKTIARPPP*SCRPTR Trigger: ACGAGTGGGACGACAGCTCCACGGTGGCGGACGAGC...GATTGTCTTTCTGTTCCCTGGGACCGCCTTCAGACATTTGGAGACAGCAGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR TCA 90 bp | TCCTCTACCAAAGCAGAGATTGAGAGGTGTGGAAGGGTGAAAGCAGATTTCTATGAGCCGAGGCCCACCTaGGGGGCCCGCGGTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTKAEIERCGRVKADFYEPRPT*GARGTA Trigger: AGCAGTACCGCGGGCCCCTCAGGTGGGCCTCGGCTC...ATAGAAATCTGCTTTCACCCTTCCACACCTCTCAATCTCTGCTTTGGTAGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR TCA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGCGTTGGCCGTGTGGTTaGGCTGCAGCGCGCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLRWPCG*AAARCR Trigger: ACGACAGCGCGCTGCAGCTCAACCACACGGCCAACG...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR GCA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGACGGGATCCAGGTCCTaGCTGGGCTGCTCCGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLTGSRS*LGCSAK Trigger: CTTCGCGGAGCAGCCCAGGCAGGACCTGGATCCCGT...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CCA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGGCTCGTCCGCCACCGTaGAGCTGTCGTCCCACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLARPPP*SCRPTR Trigger: ACGAGTGGGACGACAGCTCCACGGTGGCGGACGAGC...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR TCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTAGGTGGAGAAGCGATTaGGGTTGCGGCTCACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSRWRSD*GCGSRW Trigger: CCACCGTGAGCCGCAACCTCAATCGCTTCTCCACCT...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR TCA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGCCTCCCCGCCGGACTTaGCGAAGGTGGAGAAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLPPRRT*RRWRSD Trigger: ATCGCTTCTCCACCTTCGTCAAGTCCGGCGGGGAGG...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR GCA 90 bp | GAATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGCCGTGTGGTTGAGCTaGAGCGCGCTGTCGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: ECVPSSWVQTGYLQIQQLAVWLS*SALSSI Trigger: GATGGACGACAGCGCGCTGCAGCTCAACCACACGGC...AAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR GCA 90 bp | GGGTACTCCCTTTCAGCGGCAGCAACAAGACTGAAAACGTTTGATCATTCTCCCCCCACCGAGAAGGCCTaGTGGTCCAGCTCAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GYSLSAAATRLKTFDHSPPTEKA*WSSSKA Trigger: GGCCTTTGAGCTGGACCAGCAGGCCTTCTCGGTGGG...GGGAGAATGATCAAACGTTTTCAGTCTTGTTGCTGCCGCTGAAAGGGAGTACCC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR GCA 90 bp | GAATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTCCCACCGAGAAGGCCTaGTGGTCCAGCTCAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ECVPSSWVQTGYLQIQQLPTEKA*WSSSKA Trigger: GGCCTTTGAGCTGGACCAGCAGGCCTTCTCGGTGGG...AAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTAACTCGTTGGCCGTGTaGTTGAGCTGCAGCGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSNSLAV*LSCSAL Trigger: CAGCGCGCTGCAGCTCAACCACACGGCCAACGAGTT...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR TCA 90 bp | GGGTACTCCCTTTCAGCGGCAGCAACAAGACTGAAAACGTTTGATCATTCTCCCAGGTGGAGAAGCGATTaGGGTTGCGGCTCACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GYSLSAAATRLKTFDHSPRWRSD*GCGSRW Trigger: CCACCGTGAGCCGCAACCTCAATCGCTTCTCCACCT...GGGAGAATGATCAAACGTTTTCAGTCTTGTTGCTGCCGCTGAAAGGGAGTACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR GCA 90 bp | GAATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTTGGGGTCGTCGATGGTaGACTGGAACGGGTAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ECVPSSWVQTGYLQIQQLWGRRW*TGTGRG Trigger: ACCCCTACCCGTTCCAGTGCACCATCGACGACCCCA...AAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR GCA 90 bp | GGACAGCTAACTCACTGGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGCTTTCTCGTCGGTGCTaGTGGGGCACGTCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GQLTHWDTSNAALRSNTQLSRRC*WGTSGS Trigger: ACTTCCTGACGTGCCCCAGCAGCACCGACGAGAAAG...CTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCCAGTGAGTTAGCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR GCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTCTTTCTCGTCGGTGCTaGTGGGGCACGTCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSLSRRC*WGTSGS Trigger: ACTTCCTGACGTGCCCCAGCAGCACCGACGAGAAAG...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR GCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTTTGAAGCCGGTCACCTaGTTGCGCGCGAACTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSLKPVT*LRANSL Trigger: CAACGAGTTCGCGCGCAAGCAGGTGACCGGCTTCAA...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CCA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGTGGTGGGGTCGTCGATaGTGCACTGGAACGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLWWGRR*CTGTGR Trigger: CCTACCCGTTCCAGTGCACCATCGACGACCCCACCA...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CCA 90 bp | GAATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGCACCTGCGTGTGCGTaGGCACCAGCTTGTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ECVPSSWVQTGYLQIQQLAPACA*APACRR Trigger: TCTCCTACAAGCTGGTGCCCACGCACACGCAGGTGC...AAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CCA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGCCAGCACTGGGTGGCTaGCCATGTGGTTCATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLPALGG*PCGSST Trigger: GGTGGATGAACCACATGGCCAGCCACCCAGTGCTGG...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CCA 90 bp | GAATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTACCGAGAAGGCCTGCTaGTCCAGCTCAAAGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ECVPSSWVQTGYLQIQQLTEKAC*SSSKAW Trigger: CCAGGCCTTTGAGCTGGACCAGCAGGCCTTCTCGGT...AAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CCA 90 bp | GGACAGCTAACTCACTGGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGCGAAGAGCTCGCCAATaGCGTCATAGGCATCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GQLTHWDTSNAALRSNTQRRARQ*RHRHLR Trigger: CCGGAGATGCCTATGACGCCATTGGCGAGCTCTTCG...CTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCCAGTGAGTTAGCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR TCA 90 bp | GTCTCCAAATGTCTGAAGGCGGTCCCAGGGAACAGAAAGACAATCAAGGGAGGCAGCTCTTCATGCCCTTaGACTTGGTCTGCTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSKCLKAVPGNRKTIKGGSSSCP*TWSAWW Trigger: CCACCAAGCAGACCAAGTTCAAGGGCATGAAGAGCT...GCCTCCCTTGATTGTCTTTCTGTTCCCTGGGACCGCCTTCAGACATTTGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR TCA 90 bp | GTCTCCAAATGTCTGAAGGCGGTCCCAGGGAACAGAAAGACAATCAAGGGAGGCGACTGGCCCACCTTCTaGTACTCCTTTTTGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSKCLKAVPGNRKTIKGGDWPTF*YSFLKP Trigger: CGGCTTCAAAAAGGAGTATCAGAAGGTGGGCCAGTC...GCCTCCCTTGATTGTCTTTCTGTTCCCTGGGACCGCCTTCAGACATTTGGAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR TCA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGCAAATTGATGACAGCTaGTCGTCCCACCCCACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLQIDDS*SSHPTA Trigger: GGCGGTGGGGTGGGACGATCAGCTGTCATCAATTTG...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR GCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTATGCCGTCAGCCTTCTaGACCTCCATCTTCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSMPSAF*TSIFPS Trigger: GGAAGGGAAGATGGAGGTGCAGAAGGCTGACGGCAT...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTCAGCGAGATCTCTCCTaGGTTCTCCGACCTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSQRDLS*VLRPEV Trigger: GACTTCAGGTCGGAGAACCCAGGAGAGATCTCGCTG...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CCA 90 bp | GAGACTGCTGTCTCCAAATGTCTGAAGGCGGTCCCAGGGAACAGAAAGACAATCACTTGGTCTGCTTGGTaGGGTCGTCGATGGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: ETAVSKCLKAVPGNRKTITWSAW*GRRWCT Trigger: AGTGCACCATCGACGACCCCACCAAGCAGACCAAGT...GATTGTCTTTCTGTTCCCTGGGACCGCCTTCAGACATTTGGAGACAGCAGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR CCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTACTTGGTCTGCTTGGTaGGGTCGTCGATGGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSTWSAW*GRRWCT Trigger: AGTGCACCATCGACGACCCCACCAAGCAGACCAAGT...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CCA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGCGAAGAGCTCGCCAATaGCGTCATAGGCATCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLRRARQ*RHRHLR Trigger: CCGGAGATGCCTATGACGCCATTGGCGAGCTCTTCG...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR TCA 90 bp | CCCCTTCTAATTCTACCCTCGTCTCAAGATTACAGATTTGAGCAGCTCATTACTCGTTGGCCGTGTGGTTaGGCTGCAGCGCGCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PLLILPSSQDYRFEQLITRWPCG*AAARCR Trigger: ACGACAGCGCGCTGCAGCTCAACCACACGGCCAACG...AGTAATGAGCTGCTCAAATCTGTAATCTTGAGACGAGGGTAGAATTAGAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR TCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTGACTGGCCCACCTTCTaGTACTCCTTTTTGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSDWPTF*YSFLKP Trigger: CGGCTTCAAAAAGGAGTATCAGAAGGTGGGCCAGTC...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR TCA 90 bp | GAATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGTGTTACAGCGATCCTaGATGCCGTCAGCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ECVPSSWVQTGYLQIQQLVLQRS*MPSAFC Trigger: GCAGAAGGCTGACGGCATTCAGGATCGCTGTAACAC...AAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR TCA 90 bp | CCCCTTCTAATTCTACCCTCGTCTCAAGATTACAGATTTGAGCAGCTCATTACTCCTCCCCGCCGGACTTaGCGAAGGTGGAGAAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLILPSSQDYRFEQLITPPRRT*RRWRSD Trigger: ATCGCTTCTCCACCTTCGTCAAGTCCGGCGGGGAGG...AGTAATGAGCTGCTCAAATCTGTAATCTTGAGACGAGGGTAGAATTAGAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR TCA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGAGCTCTTCATGCCCTTaGACTTGGTCTGCTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLSSSCP*TWSAWW Trigger: CCACCAAGCAGACCAAGTTCAAGGGCATGAAGAGCT...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR TCA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGTTAGCCAGATGCCCCTaGTACAGCGCTAATAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLLARCP*YSANRS Trigger: GGACCTATTAGCGCTGTATCAGGGGCATCTGGCTAA...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
||
| CDS-3UTR GCA 90 bp | GTGGAAATGAGAAAATTGAATGCTTATGGACTTAAAGGTATCAGACATGGCATTCGGGCGGCTGGAAGGTaGTCGGAGGCGGCGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VEMRKLNAYGLKGIRHGIRAAGR*SEAAPA Trigger: AGCAGGCGCCGCCTCCGAGCACCTTCCAGCCGCCCG...AATGCCATGTCTGATACCTTTAAGTCCATAAGCATTCAATTTTCTCATTTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
||
| CDS-3UTR GCA 90 bp | TGCCAAGAAAGTTACTACTGTCTACTAAAATTAGTACTGATGTCCAGGGTACTCGTCGAGGTCCGGGTATaGTCCGCTGCCCAGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CQESYYCLLKLVLMSRVLVEVRV*SAAQSA Trigger: GGCGCTCTGGGCAGCGGAGCATACCCGGACCTCGAC...GAGTACCCTGGACATCAGTACTAATTTTAGTAGACAGTAGTAACTTTCTTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR GCA 90 bp | GTGGAAATGAGAAAATTGAATGCTTATGGACTTAAAGGTATCAGACATGGCATTGCGGTAGCGGCCGGCTaGGCCCACACCCGCCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VEMRKLNAYGLKGIRHGIAVAAG*AHTRRR Trigger: TCTTCGGCGGGTGTGGGCGCAGCCGGCCGCTACCGC...AATGCCATGTCTGATACCTTTAAGTCCATAAGCATTCAATTTTCTCATTTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
||
| CDS-3UTR GCA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGTACAGCGATCCTGAATaGCGTCAGCCTTCTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLYSDPE*RQPSAP Trigger: AGGTGCAGAAGGCTGACGGCATTCAGGATCGCTGTA...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
||
| CDS-3UTR GCA 90 bp | TCCTCTACCAAAGCAGAGATTGAGAGGTGTGGAAGGGTGAAAGCAGATTTCTATAGGAGTAGGTTTCCCTaGCCAGCCGCCCCTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSTKAEIERCGRVKADFYRSRFP*PAAPTL Trigger: CAGTGTAGGGGCGGCTGGGCAGGGAAACCTACTCCT...ATAGAAATCTGCTTTCACCCTTCCACACCTCTCAATCTCTGCTTTGGTAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR GCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTTTCCCTCATCCTGGGTaGAAACTGGGTACCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSFPHPG*KLGTFR Trigger: TCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAA...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
||
| CDS-3UTR CCA 90 bp | TTAGGTCCCCTTCTAATTCTACCCTCGTCTCAAGATTACAGATTTGAGCAGCTCAACTCGTTGGCCGTGTaGTTGAGCTGCAGCGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGPLLILPSSQDYRFEQLNSLAV*LSCSAL Trigger: CAGCGCGCTGCAGCTCAACCACACGGCCAACGAGTT...GAGCTGCTCAAATCTGTAATCTTGAGACGAGGGTAGAATTAGAAGGGGACCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | GAATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTTGCGTTCCCTCATCCTaGGTGCAAACTGGGTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: ECVPSSWVQTGYLQIQQLCVPSS*VQTGYL Trigger: AAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCA...AAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
||
| CDS-3UTR TCA 90 bp | GAATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTTCTGATACTCCTTTTTaGAGCCGGTCACCTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ECVPSSWVQTGYLQIQQLSDTPF*SRSPAC Trigger: GCAAGCAGGTGACCGGCTTCAAAAAGGAGTATCAGA...AAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381410.5 |
||
| CDS-3UTR TCA 90 bp | AGGCGGTCCCAGGGAACAGAAAGACAATCAAGGGAGGCAAACTTCAGTTCAATACAGGCTTTACCTTTCTaGACGTGGATGATGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRSQGTERQSREANFSSIQALPF*TWMMSG Trigger: CCCGGACATCATCCACGTTCAGAAAGGTAAAGCCTG...TATTGAACTGAAGTTTGCCTCCCTTGATTGTCTTTCTGTTCCCTGGGACCGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR GCA 90 bp | GGACAGCTAACTCACTGGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGACACTCCATATCACCTaGTCTAAGGGCCAGGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GQLTHWDTSNAALRSNTQTLHIT*SKGQAL Trigger: TAAAGCCTGGCCCTTAGAGCAGGTGATATGGAGTGT...CTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCCAGTGAGTTAGCTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | GGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGATTATATTCATTCTATCATCGCTGCCTTGGCTaGCCTGGTAGCCGCCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GIPATLLSDPILRLYSFYHRCLG*PGSRRR Trigger: TCTACGGCGGCTACCAGGCCAGCCAAGGCAGCGATG...ATAGAATGAATATAATCTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | GTGGAAATGAGAAAATTGAATGCTTATGGACTTAAAGGTATCAGACATGGCATTACAGGTCGGAGCGCGTaGACAGGCGGTAGCGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VEMRKLNAYGLKGIRHGITGRSA*TGGSGR Trigger: CCGGCCGCTACCGCCTGTCCACGCGCTCCGACCTGT...AATGCCATGTCTGATACCTTTAAGTCCATAAGCATTCAATTTTCTCATTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
||
| CDS-3UTR GCA 90 bp | TCCTCTACCAAAGCAGAGATTGAGAGGTGTGGAAGGGTGAAAGCAGATTTCTATCCCTTGAACTTGGTCTaGTTGGTGGGGTCGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSTKAEIERCGRVKADFYPLNLV*LVGSSM Trigger: CATCGACGACCCCACCAAGCAGACCAAGTTCAAGGG...ATAGAAATCTGCTTTCACCCTTCCACACCTCTCAATCTCTGCTTTGGTAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR GCA 90 bp | GTGGAAATGAGAAAATTGAATGCTTATGGACTTAAAGGTATCAGACATGGCATTCGATGCACCGGCACCTaGGTGTGCGTGGGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VEMRKLNAYGLKGIRHGIRCTGT*VCVGTS Trigger: GCTGGTGCCCACGCACACGCAGGTGCCGGTGCATCG...AATGCCATGTCTGATACCTTTAAGTCCATAAGCATTCAATTTTCTCATTTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
||
| CDS-3UTR GCA 90 bp | TGCCAAGAAAGTTACTACTGTCTACTAAAATTAGTACTGATGTCCAGGGTACTCGCCGTGTGGTTGAGCTaGAGCGCGCTGTCGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: CQESYYCLLKLVLMSRVLAVWLS*SALSSI Trigger: GATGGACGACAGCGCGCTGCAGCTCAACCACACGGC...GAGTACCCTGGACATCAGTACTAATTTTAGTAGACAGTAGTAACTTTCTTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR GCA 90 bp | GGGTACTCCCTTTCAGCGGCAGCAACAAGACTGAAAACGTTTGATCATTCTCCCTCGCCCCTTTCAGCCTaGACAATACACTCCATATCA | + |
|
Preference number: 4 (lower is better) Translates to: GYSLSAAATRLKTFDHSPSPLSA*TIHSIS Trigger: TGATATGGAGTGTATTGTGCAGGCTGAAAGGGGCGA...GGGAGAATGATCAAACGTTTTCAGTCTTGTTGCTGCCGCTGAAAGGGAGTACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR GCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTCATTTCACTTTTGAATaGGTTCCCTCATCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSHFTFE*VPSSWV Trigger: CACCCAGGATGAGGGAACGCATTCAAAAGTGAAATG...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
||
| CDS-3UTR CCA 90 bp | TTAGGTCCCCTTCTAATTCTACCCTCGTCTCAAGATTACAGATTTGAGCAGCTCCAGCGAGATCTCTCCTaGGTTCTCCGACCTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGPLLILPSSQDYRFEQLQRDLS*VLRPEV Trigger: GACTTCAGGTCGGAGAACCCAGGAGAGATCTCGCTG...GAGCTGCTCAAATCTGTAATCTTGAGACGAGGGTAGAATTAGAAGGGGACCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | CCCCTTCTAATTCTACCCTCGTCTCAAGATTACAGATTTGAGCAGCTCATTACTGGGTCAGGAAGAAGTTaGCGCCCACCATCTCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLLILPSSQDYRFEQLITGSGRS*RPPSRP Trigger: AGGACGAGATGGTGGGCGCCAACTTCTTCCTGACCC...AGTAATGAGCTGCTCAAATCTGTAATCTTGAGACGAGGGTAGAATTAGAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | TTTCCCTGCTCAGGAGTAGGTTTCCCTGCCCAGCCGCCCCTACACTGGACTTTCTTAATTTGCAAATTCTaGTGCTTTAGCAAAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPCSGVGFPAQPPLHWTFLICKF*CFSKGQ Trigger: CTGACCTTTGCTAAAGCACCAGAATTTGCAAATTAA...GAAAGTCCAGTGTAGGGGCGGCTGGGCAGGGAAACCTACTCCTGAGCAGGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTTCAGATACAACAGCTTaGACGGGGAACAAGATTACG | + |
|
Preference number: 4 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSSDTTA*TGNKIT Trigger: CGTAATCTTGTTCCCCGTCCAAGCTGTTGTATCTGA...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
||
| CDS-3UTR GCA 90 bp | CTTTTCCTGAAATTACTTCACTTCGTAAAGGTTGCAGGCAAGAATTCTTTGCAGTGGGGTCGTCGATGGTaGACTGGAACGGGTAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFLKLLHFVKVAGKNSLQWGRRW*TGTGRG Trigger: ACCCCTACCCGTTCCAGTGCACCATCGACGACCCCA...CTGCAAAGAATTCTTGCCTGCAACCTTTACGAAGTGAAGTAATTTCAGGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR GCA 90 bp | TTAGGTCCCCTTCTAATTCTACCCTCGTCTCAAGATTACAGATTTGAGCAGCTCTTTCACAGGCAAGACTaGCTCCCTAACTCCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: LGPLLILPSSQDYRFEQLFHRQD*LPNSHT Trigger: GGTGTGGGAGTTAGGGAGGCAGTCTTGCCTGTGAAA...GAGCTGCTCAAATCTGTAATCTTGAGACGAGGGTAGAATTAGAAGGGGACCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR GCA 90 bp | GAGACTGCTGTCTCCAAATGTCTGAAGGCGGTCCCAGGGAACAGAAAGACAATCATACAAGAAAAGACATaGCAGAGATCAGGGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ETAVSKCLKAVPGNRKTIIQEKT*QRSGLL Trigger: GAGCAACCCTGATCTCTGGCATGTCTTTTCTTGTAT...GATTGTCTTTCTGTTCCCTGGGACCGCCTTCAGACATTTGGAGACAGCAGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | TGCCAAGAAAGTTACTACTGTCTACTAAAATTAGTACTGATGTCCAGGGTACTCTGGTGGGGTCGTCGATaGTGCACTGGAACGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CQESYYCLLKLVLMSRVLWWGRR*CTGTGR Trigger: CCTACCCGTTCCAGTGCACCATCGACGACCCCACCA...GAGTACCCTGGACATCAGTACTAATTTTAGTAGACAGTAGTAACTTTCTTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | AGGGAACAGAAAGACAATCAAGGGAGGCAAACTTCAGTTCAATACAAGAAAAGAGCACCTGCGTGTGCGTaGGCACCAGCTTGTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: REQKDNQGRQTSVQYKKRAPACA*APACRR Trigger: TCTCCTACAAGCTGGTGCCCACGCACACGCAGGTGC...TCTTTTCTTGTATTGAACTGAAGTTTGCCTCCCTTGATTGTCTTTCTGTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | CTTTTCCTGAAATTACTTCACTTCGTAAAGGTTGCAGGCAAGAATTCTTTGCAGACCGAGAAGGCCTGCTaGTCCAGCTCAAAGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLKLLHFVKVAGKNSLQTEKAC*SSSKAW Trigger: CCAGGCCTTTGAGCTGGACCAGCAGGCCTTCTCGGT...CTGCAAAGAATTCTTGCCTGCAACCTTTACGAAGTGAAGTAATTTCAGGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | TCCTCTACCAAAGCAGAGATTGAGAGGTGTGGAAGGGTGAAAGCAGATTTCTATGGACAGCTAACTCACTaGGATACCAGCAACGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTKAEIERCGRVKADFYGQLTH*DTSNAA Trigger: AGCAGCGTTGCTGGTATCCCAGTGAGTTAGCTGTCC...ATAGAAATCTGCTTTCACCCTTCCACACCTCTCAATCTCTGCTTTGGTAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGATCCTGGGTGCAAACTaGGTACCTTCAGATACAACA | + |
|
Preference number: 4 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLILGAN*VPSDTT Trigger: TGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGAT...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
||
| CDS-3UTR TCA 90 bp | AGGGAACAGAAAGACAATCAAGGGAGGCAAACTTCAGTTCAATACAAGAAAAGAAAAGGCCAGACCCGCTaGGGAAACAGGGACAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: REQKDNQGRQTSVQYKKRKGQTR*GNRDSR Trigger: CCTACTGTCCCTGTTTCCTCAGCGGGTCTGGCCTTT...TCTTTTCTTGTATTGAACTGAAGTTTGCCTCCCTTGATTGTCTTTCTGTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | AGAAAGTTACTACTGTCTACTAAAATTAGTACTGATGTCCAGGGTACTCCCTTTCCAGCACTGGGTGGCTaGCCATGTGGTTCATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RKLLLSTKISTDVQGTPFPALGG*PCGSST Trigger: GGTGGATGAACCACATGGCCAGCCACCCAGTGCTGG...AAAGGGAGTACCCTGGACATCAGTACTAATTTTAGTAGACAGTAGTAACTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | CTGGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGATTATATTCATTCTGACCAGTCACGCATTTaGAAGGGGAAGGAGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGYQQRCSQIQYSDYIHSDQSRI*KGKERS Trigger: GCTTCTCTCCTTCCCCTTCCAAATGCGTGACTGGTC...AGAATGAATATAATCTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| 3UTR CAA 72 bp | AGTTCAATACAAGAAAAGACATGCCAGAGATCAGGGTaGCTCATAAACGGACTGGCCCACCAGAAAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSIQEKTCQRSG*LINGLAHQKGS Trigger: ACTGCCTTTCTGGTGGGCCAGTCCGTTTATGAGCAACCCTGATCTCTGGCATGTCTTTTCTTGTATTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR GCA 90 bp | CTGGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGATTATATTCATTCTAACCCACAGTGGTACTaGTGTCAAAGTCGCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGYQQRCSQIQYSDYIHSNPQWY*CQSRPF Trigger: AAAGGGGCGACTTTGACAGCAGTACCACTGTGGGTT...AGAATGAATATAATCTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR GCA 90 bp | CCCCTTCTAATTCTACCCTCGTCTCAAGATTACAGATTTGAGCAGCTCATTACTGACAGTAGGTTTCCCTaGTCAGGAGTAGGTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLLILPSSQDYRFEQLITDSRFP*SGVGFP Trigger: AGGGAAACCTACTCCTGAGCAGGGAAACCTACTGTC...AGTAATGAGCTGCTCAAATCTGTAATCTTGAGACGAGGGTAGAATTAGAAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR GCA 90 bp | TTAGGTCCCCTTCTAATTCTACCCTCGTCTCAAGATTACAGATTTGAGCAGCTCGGAAGGAAGCGAGACTaGTGTCTCCAAATGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGPLLILPSSQDYRFEQLGRKRD*CLQMSE Trigger: TTCAGACATTTGGAGACAGCAGTCTCGCTTCCTTCC...GAGCTGCTCAAATCTGTAATCTTGAGACGAGGGTAGAATTAGAAGGGGACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | GGACAGCTAACTCACTGGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGAACAGATACCTAACATaGTTTAGGTCCCCTTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GQLTHWDTSNAALRSNTQNRYLT*FRSPSN Trigger: ATTAGAAGGGGACCTAAACCATGTTAGGTATCTGTT...CTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCCAGTGAGTTAGCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR TCA 90 bp | GGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGATTATATTCATTCTATTCTGATACTCCTTTTTaGAGCCGGTCACCTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GIPATLLSDPILRLYSFYSDTPF*SRSPAC Trigger: GCAAGCAGGTGACCGGCTTCAAAAAGGAGTATCAGA...ATAGAATGAATATAATCTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR TCA 90 bp | GTGAAAGCAGATTTCTATTTACAGACATCCGTTCTTCTCCATTATTTCCTCACTCTGTCTCCAAATGTCTaGAGGCGGTCCCAGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VKADFYLQTSVLLHYFLTLSPNV*RRSQGT Trigger: TGTTCCCTGGGACCGCCTTCAGACATTTGGAGACAG...AGTGAGGAAATAATGGAGAAGAACGGATGTCTGTAAATAGAAATCTGCTTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR TCA 90 bp | TTAGGTCCCCTTCTAATTCTACCCTCGTCTCAAGATTACAGATTTGAGCAGCTCAAGACTGAAAACGTTTaGTCATTCTCCCAGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGPLLILPSSQDYRFEQLKTENV*SFSQQA Trigger: GGCTTGCTGGGAGAATGATCAAACGTTTTCAGTCTT...GAGCTGCTCAAATCTGTAATCTTGAGACGAGGGTAGAATTAGAAGGGGACCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR GCA 90 bp | AACTTCAGTTCAATACAAGAAAAGACATGCCAGAGATCAGGGTTGCTCATAAACACTCGAGGAGGAAGCTaGCTGTCGAGCAATCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: NFSSIQEKTCQRSGLLINTRGGS*LSSNPT Trigger: AGTTGGATTGCTCGACAGGCAGCTTCCTCCTCGAGT...GTTTATGAGCAACCCTGATCTCTGGCATGTCTTTTCTTGTATTGAACTGAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR CCA 90 bp | GTGGAAATGAGAAAATTGAATGCTTATGGACTTAAAGGTATCAGACATGGCATTGGGTCAGGAAGAAGTTaGCGCCCACCATCTCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VEMRKLNAYGLKGIRHGIGSGRS*RPPSRP Trigger: AGGACGAGATGGTGGGCGCCAACTTCTTCCTGACCC...AATGCCATGTCTGATACCTTTAAGTCCATAAGCATTCAATTTTCTCATTTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
||
| CDS-3UTR CCA 90 bp | AAGGGTGAAAGCAGATTTCTATTTACAGACATCCGTTCTTCTCCATTATTTCCTCAGCCGCCCCTACACTaGACTTTCACAGGCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: KGESRFLFTDIRSSPLFPQPPLH*TFTGKT Trigger: AGTCTTGCCTGTGAAAGTCCAGTGTAGGGGCGGCTG...AGGAAATAATGGAGAAGAACGGATGTCTGTAAATAGAAATCTGCTTTCACCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR TCA 90 bp | AAGGGTGAAAGCAGATTTCTATTTACAGACATCCGTTCTTCTCCATTATTTCCTTTAGCCAGATGCCCCTaGTACAGCGCTAATAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGESRFLFTDIRSSPLFPLARCP*YSANRS Trigger: GGACCTATTAGCGCTGTATCAGGGGCATCTGGCTAA...AGGAAATAATGGAGAAGAACGGATGTCTGTAAATAGAAATCTGCTTTCACCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR TCA 90 bp | TCCTCTACCAAAGCAGAGATTGAGAGGTGTGGAAGGGTGAAAGCAGATTTCTATAAACTCACCACTAAGTaGCAGTGCAGTGTTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SSTKAEIERCGRVKADFYKLTTK*QCSVQT Trigger: TGTTTGAACACTGCACTGTCACTTAGTGGTGAGTTT...ATAGAAATCTGCTTTCACCCTTCCACACCTCTCAATCTCTGCTTTGGTAGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR TCA 90 bp | AGGCGGTCCCAGGGAACAGAAAGACAATCAAGGGAGGCAAACTTCAGTTCAATATATTTCCTCACTTTTTaGAACTCACCACTAAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRSQGTERQSREANFSSIYFLTF*NSPLSD Trigger: GTCACTTAGTGGTGAGTTTCAAAAAGTGAGGAAATA...TATTGAACTGAAGTTTGCCTCCCTTGATTGTCTTTCTGTTCCCTGGGACCGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343017.11 |
||
| CDS-3UTR GCA 90 bp | GTGGAAATGAGAAAATTGAATGCTTATGGACTTAAAGGTATCAGACATGGCATTCCCTTGAACTTGGTCTaGTTGGTGGGGTCGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: VEMRKLNAYGLKGIRHGIPLNLV*LVGSSM Trigger: CATCGACGACCCCACCAAGCAGACCAAGTTCAAGGG...AATGCCATGTCTGATACCTTTAAGTCCATAAGCATTCAATTTTCTCATTTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR GCA 90 bp | GGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGATTATATTCATTCTATGGATACCAGCAACGCTaGTCTCAGATCCAATACTCA | + |
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Preference number: 4 (lower is better) Translates to: GIPATLLSDPILRLYSFYGYQQR*SQIQYS Trigger: TGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCC...ATAGAATGAATATAATCTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR CCA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGTGTATCAGTGAAGCCTaGGAAAATCTCAATTACTAT | + |
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Preference number: 4 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLCISEA*ENLNYY Trigger: ATAGTAATTGAGATTTTCCCAGGCTTCACTGATACA...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| 3UTR CAA 72 bp | ACTATAATATTCGTGCACTGGCTTTACATTTCACTTTaGAATGCGTTCCCTCATCCTGGGTGCAAACTGGGT | + |
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Preference number: 4 (lower is better) Translates to: TIIFVHWLYISL*NAFPHPGCKLG Trigger: ACCCAGTTTGCACCCAGGATGAGGGAACGCATTCAAAAGTGAAATGTAAAGCCAGTGCACGAATATTATAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR TCA 90 bp | AAGGGTGAAAGCAGATTTCTATTTACAGACATCCGTTCTTCTCCATTATTTCCTCGGCAGCAACAAGACTaGAAACGTTTGATCATTCTC | + |
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Preference number: 4 (lower is better) Translates to: KGESRFLFTDIRSSPLFPRQQQD*KRLIIL Trigger: GAGAATGATCAAACGTTTTCAGTCTTGTTGCTGCCG...AGGAAATAATGGAGAAGAACGGATGTCTGTAAATAGAAATCTGCTTTCACCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR GCA 90 bp | GGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGATTATATTCATTCTATTCACTTCGTAAAGGTTaGAGGCAAGAATTCTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: GIPATLLSDPILRLYSFYSLRKG*RQEFFA Trigger: TGCAAAGAATTCTTGCCTGCAACCTTTACGAAGTGA...ATAGAATGAATATAATCTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR GCA 90 bp | CTGGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGATTATATTCATTCTATTTGCAAATTCTGGTaGTTTAGCAAAGGTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LGYQQRCSQIQYSDYIHSICKFW*FSKGQR Trigger: TCTCTGACCTTTGCTAAAGCACCAGAATTTGCAAAT...AGAATGAATATAATCTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR TCA 90 bp | AGGGAACAGAAAGACAATCAAGGGAGGCAAACTTCAGTTCAATACAAGAAAAGAATCAAAGGTACTCTTTaGACCTTCGAGAAAGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: REQKDNQGRQTSVQYKKRIKGTL*TFEKEY Trigger: GTACTCTTTCTCGAAGGTTCAAAGAGTACCTTTGAT...TCTTTTCTTGTATTGAACTGAAGTTTGCCTCCCTTGATTGTCTTTCTGTTCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR TCA 90 bp | GTGAAAGCAGATTTCTATTTACAGACATCCGTTCTTCTCCATTATTTCCTCACTAGAGGTGTGGAAGGGTaGAAGCAGATTTCTATTTAC | + |
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Preference number: 4 (lower is better) Translates to: VKADFYLQTSVLLHYFLTRGVEG*KQISIY Trigger: GTAAATAGAAATCTGCTTTCACCCTTCCACACCTCT...AGTGAGGAAATAATGGAGAAGAACGGATGTCTGTAAATAGAAATCTGCTTTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR GCA 90 bp | GTGGAAATGAGAAAATTGAATGCTTATGGACTTAAAGGTATCAGACATGGCATTAAAACCAGGCTCAAGTaGACACCCTGTGTTACAAAC | + |
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Preference number: 4 (lower is better) Translates to: VEMRKLNAYGLKGIRHGIKTRLK*TPCVTN Trigger: GTTTGTAACACAGGGTGTGCACTTGAGCCTGGTTTT...AATGCCATGTCTGATACCTTTAAGTCCATAAGCATTCAATTTTCTCATTTCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR TCA 90 bp | GTGGAAATGAGAAAATTGAATGCTTATGGACTTAAAGGTATCAGACATGGCATTTTTACATTTCACTTTTaGATGCGTTCCCTCATCCTG | + |
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Preference number: 4 (lower is better) Translates to: VEMRKLNAYGLKGIRHGIFTFHF*MRSLIL Trigger: CAGGATGAGGGAACGCATTCAAAAGTGAAATGTAAA...AATGCCATGTCTGATACCTTTAAGTCCATAAGCATTCAATTTTCTCATTTCCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR TCA 90 bp | GTGGAAATGAGAAAATTGAATGCTTATGGACTTAAAGGTATCAGACATGGCATTAAACAACTGTATCAGTaGAGCCTGGGAAAATCTCAA | + |
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Preference number: 4 (lower is better) Translates to: VEMRKLNAYGLKGIRHGIKQLYQ*SLGKSQ Trigger: TTGAGATTTTCCCAGGCTTCACTGATACAGTTGTTT...AATGCCATGTCTGATACCTTTAAGTCCATAAGCATTCAATTTTCTCATTTCCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS CCA 90 bp | GGGGGACCGAGCCGCCGCGGGAACCCAGGGACAGGTCGGAGCGCGTaGACAGGCGGTAGCGGCCGGCTGCGCCCACACCCGCCGAAGACG | + |
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Preference number: 5 (lower is better) Translates to: GGPSRRGNPGTGRSA*TGGSGRLRPHPPKT Trigger: CGTCTTCGGCGGGTGTGGGCGCAGCCGGCCGCTACCGCCTGTCCACGCGCTCCGACCTGTCCCTGGGTTCCCGCGGCGGCTCGGTCCCCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000326277.5 ENST00000343017.11 ENST00000381410.5 |
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| CDS GCA 90 bp | ACCCAGGGACAGGTCGGAGCGCGTGGACAGGCGGTAGCGGCCGGCTaGGCCCACACCCGCCGAAGACGAGCCGTCGAGGTCCGGGTATGC | + |
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Preference number: 5 (lower is better) Translates to: TQGQVGARGQAVAAG*AHTRRRRAVEVRVC Trigger: GCATACCCGGACCTCGACGGCTCGTCTTCGGCGGGTGTGGGCGCAGCCGGCCGCTACCGCCTGTCCACGCGCTCCGACCTGTCCCTGGGT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000326277.5 ENST00000343017.11 ENST00000381410.5 |
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| CDS-3UTR CAA 90 bp | ATTCTCCCAGCAAGCCCCTTCCCCCATAGGAGTCAGAAGACCAGTCACGCATTTACGGTGGCCGAGCTCTaGGGCCCCGACGGGTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: ILPASPFPHRSQKTSHAFTVAEL*GPDGWC Trigger: GCACCACCCGTCGGGGCCCAAGAGCTCGGCCACCGT...AAATGCGTGACTGGTCTTCTGACTCCTATGGGGGAAGGGGCTTGCTGGGAGAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR CAA 90 bp | AATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTGACGGTGGCCGAGCTCTaGGGCCCCGACGGGTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: NAFPHPGCKLGTFRYNSLTVAEL*GPDGWC Trigger: GCACCACCCGTCGGGGCCCAAGAGCTCGGCCACCGT...CAAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CAA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTGAGAAGCGATTGAGGTaGCGGCTCACGGTGGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSEKRLR*RLTVAE Trigger: CTCGGCCACCGTGAGCCGCAACCTCAATCGCTTCTC...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CAA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTTTGCGCGCGAACTCGTaGGCCGTGTGGTTGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSLRANS*AVWLSC Trigger: GCAGCTCAACCACACGGCCAACGAGTTCGCGCGCAA...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CAA 90 bp | GAATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTAAGCCGGTCACCTGCTaGCGCGCGAACTCGTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: ECVPSSWVQTGYLQIQQLKPVTC*RANSLA Trigger: GGCCAACGAGTTCGCGCGCAAGCAGGTGACCGGCTT...AAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CAA 90 bp | TCCTCTACCAAAGCAGAGATTGAGAGGTGTGGAAGGGTGAAAGCAGATTTCTATGCCTCCCCGCCGGACTaGACGAAGGTGGAGAAGCGA | + |
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Preference number: 5 (lower is better) Translates to: SSTKAEIERCGRVKADFYASPPD*TKVEKR Trigger: TCGCTTCTCCACCTTCGTCAAGTCCGGCGGGGAGGC...ATAGAAATCTGCTTTCACCCTTCCACACCTCTCAATCTCTGCTTTGGTAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR CAA 90 bp | TTAGGTCCCCTTCTAATTCTACCCTCGTCTCAAGATTACAGATTTGAGCAGCTCAAGCCGGTCACCTGCTaGCGCGCGAACTCGTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: LGPLLILPSSQDYRFEQLKPVTC*RANSLA Trigger: GGCCAACGAGTTCGCGCGCAAGCAGGTGACCGGCTT...GAGCTGCTCAAATCTGTAATCTTGAGACGAGGGTAGAATTAGAAGGGGACCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR CAA 90 bp | TCCTCTACCAAAGCAGAGATTGAGAGGTGTGGAAGGGTGAAAGCAGATTTCTATAGGGTCAGGAAGAAGTaGGCGCCCACCATCTCGTCC | + |
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Preference number: 5 (lower is better) Translates to: SSTKAEIERCGRVKADFYRVRKK*APTISS Trigger: GGACGAGATGGTGGGCGCCAACTTCTTCCTGACCCT...ATAGAAATCTGCTTTCACCCTTCCACACCTCTCAATCTCTGCTTTGGTAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR CAA 90 bp | TTAGGTCCCCTTCTAATTCTACCCTCGTCTCAAGATTACAGATTTGAGCAGCTCTTGAACTTGGTCTGCTaGGTGGGGTCGTCGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: LGPLLILPSSQDYRFEQLLNLVC*VGSSMV Trigger: CACCATCGACGACCCCACCAAGCAGACCAAGTTCAA...GAGCTGCTCAAATCTGTAATCTTGAGACGAGGGTAGAATTAGAAGGGGACCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR CAA 90 bp | CTTTTCCTGAAATTACTTCACTTCGTAAAGGTTGCAGGCAAGAATTCTTTGCAGTTGCGCGCGAACTCGTaGGCCGTGTGGTTGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: LFLKLLHFVKVAGKNSLQLRANS*AVWLSC Trigger: GCAGCTCAACCACACGGCCAACGAGTTCGCGCGCAA...CTGCAAAGAATTCTTGCCTGCAACCTTTACGAAGTGAAGTAATTTCAGGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS GCA 90 bp | AGAAAGAGTACTCATTCCCTAATGCAAGATACTCGAGGAGGAAGCTaGCTGTCGAGCAATCCAACTTACACTCTAGGGAAAAGACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RKSTHSLMQDTRGGS*LSSNPTYTLGKRPR Trigger: CCTGGGTCTTTTCCCTAGAGTGTAAGTTGGATTGCTCGACAGGCAGCTTCCTCCTCGAGTATCTTGCATTAGGGAATGAGTACTCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR CAA 90 bp | GTGAAAGCAGATTTCTATTTACAGACATCCGTTCTTCTCCATTATTTCCTCACTGAGAAGCGATTGAGGTaGCGGCTCACGGTGGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: VKADFYLQTSVLLHYFLTEKRLR*RLTVAE Trigger: CTCGGCCACCGTGAGCCGCAACCTCAATCGCTTCTC...AGTGAGGAAATAATGGAGAAGAACGGATGTCTGTAAATAGAAATCTGCTTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS-3UTR CAA 90 bp | GAATGCGTTCCCTCATCCTGGGTGCAAACTGGGTACCTTCAGATACAACAGCTTTTCAGATACAACAGCTaGGACGGGGAACAAGATTAC | + |
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Preference number: 5 (lower is better) Translates to: ECVPSSWVQTGYLQIQQLFRYNS*DGEQDY Trigger: GTAATCTTGTTCCCCGTCCAAGCTGTTGTATCTGAA...AAGCTGTTGTATCTGAAGGTACCCAGTTTGCACCCAGGATGAGGGAACGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CAA 90 bp | CGGGGAACAAGATTACGACACATGGCTGTAGAACCAGTCTCGCTGCGTTACAGTCTTTACATTTCACTTTaGAATGCGTTCCCTCATCCT | + |
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Preference number: 5 (lower is better) Translates to: RGTRLRHMAVEPVSLRYSLYISL*NAFPHP Trigger: AGGATGAGGGAACGCATTCAAAAGTGAAATGTAAAG...ACTGTAACGCAGCGAGACTGGTTCTACAGCCATGTGTCGTAATCTTGTTCCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CAA 90 bp | GTGGAAATGAGAAAATTGAATGCTTATGGACTTAAAGGTATCAGACATGGCATTAGGGTCAGGAAGAAGTaGGCGCCCACCATCTCGTCC | + |
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Preference number: 5 (lower is better) Translates to: VEMRKLNAYGLKGIRHGIRVRKK*APTISS Trigger: GGACGAGATGGTGGGCGCCAACTTCTTCCTGACCCT...AATGCCATGTCTGATACCTTTAAGTCCATAAGCATTCAATTTTCTCATTTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CAA 90 bp | GTGGAAATGAGAAAATTGAATGCTTATGGACTTAAAGGTATCAGACATGGCATTTTGAACTTGGTCTGCTaGGTGGGGTCGTCGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: VEMRKLNAYGLKGIRHGILNLVC*VGSSMV Trigger: CACCATCGACGACCCCACCAAGCAGACCAAGTTCAA...AATGCCATGTCTGATACCTTTAAGTCCATAAGCATTCAATTTTCTCATTTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381410.5 |
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| CDS-3UTR CAA 90 bp | CTGGGATACCAGCAACGCTGCTCTCAGATCCAATACTCAGATTATATTCATTCTCATCAAAGGTACTCTTaGAACCTTCGAGAAAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: LGYQQRCSQIQYSDYIHSHQRYS*NLRERV Trigger: TACTCTTTCTCGAAGGTTCAAAGAGTACCTTTGATG...AGAATGAATATAATCTGAGTATTGGATCTGAGAGCAGCGTTGCTGGTATCCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343017.11 |
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| CDS TCA 72 bp | GGTCCCGACTCCCGGCGTCCCGAGCCGAGGCCCACCTaGGGGGCCCGCGGTACTGCTCGAGCCCTGGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: GPDSRRPEPRPT*GARGTARALAR Trigger: GCGCGCCAGGGCTCGAGCAGTACCGCGGGCCCCTCAGGTGGGCCTCGGCTCGGGACGCCGGGAGTCGGGACC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000326277.5 ENST00000381410.5 |
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| CDS GCA 72 bp | GCGCGGACTGGAGCCCCGAAGGCGGCAAACCCACGCTaGCCGGACCAGCCGGTCGCGCCCTCCGCGCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ARTGAPKAANPR*PDQPVAPSARL Trigger: GAGCCGCGCGGAGGGCGCGACCGGCTGGTCCGGGCAGCGTGGGTTTGCCGCCTTCGGGGCTCCAGTCCGCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326277.5 ENST00000381410.5 |
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| CDS CCA 72 bp | AGCCGCCGCGGGAACCCAGGGACAGGTCGGAGCGCGTaGACAGGCGGTAGCGGCCGGCTGCGCCCACACCCG | + |
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Preference number: 6 (lower is better) Translates to: SRRGNPGTGRSA*TGGSGRLRPHP Trigger: CGGGTGTGGGCGCAGCCGGCCGCTACCGCCTGTCCACGCGCTCCGACCTGTCCCTGGGTTCCCGCGGCGGCT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000326277.5 ENST00000343017.11 ENST00000381410.5 |
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| CDS GCA 72 bp | CAGGTCGGAGCGCGTGGACAGGCGGTAGCGGCCGGCTaGGCCCACACCCGCCGAAGACGAGCCGTCGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: QVGARGQAVAAG*AHTRRRRAVEV Trigger: GACCTCGACGGCTCGTCTTCGGCGGGTGTGGGCGCAGCCGGCCGCTACCGCCTGTCCACGCGCTCCGACCTG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000326277.5 ENST00000343017.11 ENST00000381410.5 |
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| CDS CAA 90 bp | AAGGCCTCCCCGCCGGACTTGACGAAGGTGGAGAAGCGATTGAGGTaGCGGCTCACGGTGGCCGAGCTCTTGGGCCCCGACGGGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: KASPPDLTKVEKRLR*RLTVAELLGPDGWC Trigger: GCACCACCCGTCGGGGCCCAAGAGCTCGGCCACCGTGAGCCGCAACCTCAATCGCTTCTCCACCTTCGTCAAGTCCGGCGGGGAGGCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000326277.5 ENST00000343017.11 ENST00000381410.5 |
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| CDS CAA 72 bp | CCGCCGGACTTGACGAAGGTGGAGAAGCGATTGAGGTaGCGGCTCACGGTGGCCGAGCTCTTGGGCCCCGAC | + |
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Preference number: 6 (lower is better) Translates to: PPDLTKVEKRLR*RLTVAELLGPD Trigger: GTCGGGGCCCAAGAGCTCGGCCACCGTGAGCCGCAACCTCAATCGCTTCTCCACCTTCGTCAAGTCCGGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000326277.5 ENST00000343017.11 ENST00000381410.5 |
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| CDS GCA 72 bp | ACAGTGGTACTGCTGTCAAAGTCGCCCCTTTCAGCCTaGACAATACACTCCATATCACCTGCTCTAAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: TVVLLSKSPLSA*TIHSISPALRA Trigger: GGCCCTTAGAGCAGGTGATATGGAGTGTATTGTGCAGGCTGAAAGGGGCGACTTTGACAGCAGTACCACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000326277.5 ENST00000343017.11 |
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