RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNX17 (Homo sapiens)

Ensembl gene IDs: ENSG00000115234

Ensembl transcript IDs: ENST00000233575.7, ENST00000427123.5, ENST00000440760.5, ENST00000453453.1, ENST00000464279.5, ENST00000484886.1, ENST00000489402.1, ENST00000493711.1, ENST00000494893.5, ENST00000537606.5

Found 646 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCATCGCATGCGGGTGACCCGGAAGGAGCCTTCTCGGAGTTGCTaGCCAGGCAGGCGGAGCTGCAGGCTGAGCTCACTGTTGCCCGCG +
Preference number: 1 (lower is better)
Translates to: QHRMRVTRKEPSRSC*PGRRSCRLSSLLPA
Trigger: CGCGGGCAACAGTGAGCTCAGCCTGCAGCTCCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTCCTTCCGGGTCACCCGCATGCGATGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR CCA 90 bp ACTGGGCCAGACCAAACACAGACCTCTGCCCATCCCCTTGGCCTTTaGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATAT +
Preference number: 1 (lower is better)
Translates to: TGPDQTQTSAHPLGL*PMAPRGQKRPRGRY
Trigger: ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATGGGCAGAGGTCTGTGTTTGGTCTGGCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR CCA 90 bp TTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATaGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTG +
Preference number: 1 (lower is better)
Translates to: LAHGSKRPEAAQREI*FLPKAGSHGPLDFV
Trigger: CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR CCA 90 bp CAGACCAAACACAGACCTCTGCCCATCCCCTTGGCCTTTGGCCCATaGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCT +
Preference number: 1 (lower is better)
Translates to: QTKHRPLPIPLAFGP*LQEARSGPEGDMVP
Trigger: AGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATGGGCAGAGGTCTGTGTTTGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR CCA 90 bp CTCCAATGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTaGCATCTGTGCTGGGACTGCCAATTCCCCGCAAGCTCACGGCAC +
Preference number: 1 (lower is better)
Translates to: LQCPRRRNCRGHHWH*HLCWDCQFPASSRH
Trigger: GTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR GCA 90 bp CCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTaGTGGGACTGCCAATTCCCCGCAAGCTCACGGCACTCAGCTTAC +
Preference number: 1 (lower is better)
Translates to: PRRRNCRGHHWHWHL*WDCQFPASSRHSAY
Trigger: GTAAGCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR CCA 90 bp CGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTaGGACTGCCAATTCCCCGCAAGCTCACGGCACTCAGCTTACTTG +
Preference number: 1 (lower is better)
Translates to: RRRNCRGHHWHWHLC*DCQFPASSRHSAYL
Trigger: CAAGTAAGCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR CCA 90 bp CCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGTGGACATCACTaGCACTGGCATCTGTGCTGGGACTGCCAATTCCCCGCAAGCTCA +
Preference number: 1 (lower is better)
Translates to: PHLQCPRRRNCRGHH*HWHLCWDCQFPASS
Trigger: TGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR GCA 90 bp CTGAGTTTAATGATGGGGAACTGGGCCAGACCAAACACAGACCTCTaGCCATCCCCTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAA +
Preference number: 1 (lower is better)
Translates to: LSLMMGNWARPNTDL*PSPWPLAHGSKRPE
Trigger: TTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATGGGCAGAGGTCTGTGTTTGGTCTGGCCCAGTTCCCCATCATTAAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR CCA 90 bp GAGCTCACTGTTGCCCGCGCTCACCACCACAGGACAGTCCTTTTCTaGGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGCCATAGTG +
Preference number: 1 (lower is better)
Translates to: ELTVARAHHHRTVLF*EVSHTGIKAQVAIV
Trigger: CACTATGGCTACTTGCGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCTGTGGTGGTGAGCGCGGGCAACAGTGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR GCA 90 bp CGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGGACTaGCAATTCCCCGCAAGCTCACGGCACTCAGCTTACTTGAGAGTT +
Preference number: 1 (lower is better)
Translates to: RNCRGHHWHWHLCWD*QFPASSRHSAYLRV
Trigger: AACTCTCAAGTAAGCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR GCA 90 bp GTGGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTaGCGTGGACATCACTGGCACTGGCATCTGTGCTGGGACTGCCAA +
Preference number: 1 (lower is better)
Translates to: VEITDPHLQCPRRRN*RGHHWHWHLCWDCQ
Trigger: TTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR CCA 90 bp GATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGTaGACATCACTGGCACTGGCATCTGTGCTGGGACTGCCAATTCCC +
Preference number: 1 (lower is better)
Translates to: DYRSSSPMPSKAKLP*TSLALASVLGLPIP
Trigger: GGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR GCA 90 bp AGGGCAGACATCCAAGCAGTGGAGATTACAGATCCTCATCTCCAATaGCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCAT +
Preference number: 1 (lower is better)
Translates to: RADIQAVEITDPHLQ*PRRRNCRGHHWHWH
Trigger: ATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCTTGGATGTCTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR GCA 90 bp CTCAGGAACTCCTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTaGCGGTGCTGTTCCTTGGTGACCAAGATCCACCCACGCTCAATA +
Preference number: 1 (lower is better)
Translates to: LRNSFLETFSCRDLS*RCCSLVTKIHPRSI
Trigger: TATTGAGCGTGGGTGGATCTTGGTCACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR TCA 90 bp ATACCGTCTGAGCATAAAGCAGGTTCAGGCCAACCCGGTTCTCCATaGCATCGTCATCATAGGCAGAGTCCCAATAACTCTTCCTTAGCA +
Preference number: 1 (lower is better)
Translates to: IPSEHKAGSGQPGSP*HRHHRQSPNNSSLA
Trigger: TGCTAAGGAAGAGTTATTGGGACTCTGCCTATGATGACGATGTCATGGAGAACCGGGTTGGCCTGAACCTGCTTTATGCTCAGACGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR GCA 90 bp AACTCCTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTaGTGTTCCTTGGTGACCAAGATCCACCCACGCTCAATATCTGAT +
Preference number: 1 (lower is better)
Translates to: NSFLETFSCRDLSCR*CSLVTKIHPRSISD
Trigger: ATCAGATATTGAGCGTGGGTGGATCTTGGTCACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR CCA 90 bp AGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGCAGTaGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATT +
Preference number: 1 (lower is better)
Translates to: SFCKFLWGRGQTSKQ*RLQILISNALEGEI
Trigger: AATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR TCA 90 bp GTCTCTTCCTTAGCACAATCTTATACTCTTGACTCCGAAGGCTGGTaGCAGACACATAAGGCAGCTCAAACTCTTGCAACTTCCGTACAA +
Preference number: 1 (lower is better)
Translates to: VSSLAQSYTLDSEGW*QTHKAAQTLATSVQ
Trigger: TTGTACGGAAGTTGCAAGAGTTTGAGCTGCCTTATGTGTCTGTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGTGCTAAGGAAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453453.1
3UTR TCA 90 bp AACTCTTCCTTAGCACAATCTTATACTCTTGACTCCGAAGGCTGGTaGCAGACACATAAGGCAGCTCAAACTCTTGCAACTTCCGTACAA +
Preference number: 1 (lower is better)
Translates to: NSSLAQSYTLDSEGW*QTHKAAQTLATSVQ
Trigger: TTGTACGGAAGTTGCAAGAGTTTGAGCTGCCTTATGTGTCTGTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGTGCTAAGGAAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR TCA 90 bp AGAGGAGGTGACCCGCCAGCATCGCATGCGGGTGACCCGGAAGGAGCCTTCTCGGGCGGAGCTGCAGGCTaGGCTCACTGTTGCCCGCGC +
Preference number: 2 (lower is better)
Translates to: RGGDPPASHAGDPEGAFSGGAAG*AHCCPR
Trigger: GCGCGGGCAACAGTGAGCTCAGCCTGCAGCTCCGCC...CGAGAAGGCTCCTTCCGGGTCACCCGCATGCGATGCTGGCGGGTCACCTCCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp GCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGGGCGGAGCTGCAGGCTaGGCTCACTGTTGCCCGCGC +
Preference number: 2 (lower is better)
Translates to: ARSGPEGDMVPPQGRQPWGGAAG*AHCCPR
Trigger: GCGCGGGCAACAGTGAGCTCAGCCTGCAGCTCCGCC...CCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp TGGTACAGAGGAGGTGACCCGCCAGCATCGCATGCGGGTGACCCGGAAGGAGCCAGCATCGCATGCGGGTaGCCCGGAAGGAGCCTTCTC +
Preference number: 2 (lower is better)
Translates to: WYRGGDPPASHAGDPEGASIACG*PGRSLL
Trigger: GAGAAGGCTCCTTCCGGGTCACCCGCATGCGATGCT...GGCTCCTTCCGGGTCACCCGCATGCGATGCTGGCGGGTCACCTCCTCTGTACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR GCA 90 bp CAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCGAGCCTTCTCGGAGTTaGTGGCCAGGCAGGCGGAGC +
Preference number: 2 (lower is better)
Translates to: QKRPRGRYGSSPRQAAMVEPSRS*WPGRRS
Trigger: GCTCCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTC...GACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp CAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTCTCGGAGTTGCTaGCCAGGCAGGCGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: QKRPRGRYGSSPRQAAMVPSRSC*PGRRSC
Trigger: GCAGCTCCGCCTGCCTGGCCAGCAACTCCGAGAAGG...GACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR GCA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCAGGGGCAATCCTCTGTaGAGCCAGCCCAGGGGACAA +
Preference number: 2 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPRGNPL*SQPRGQ
Trigger: TTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCCCT...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR GCA 90 bp AGAGGAGGTGACCCGCCAGCATCGCATGCGGGTGACCCGGAAGGAGCCTTCTCGTCCTCTGTGGGGACCTaGTGTGTCTCCTGTTGTGCC +
Preference number: 2 (lower is better)
Translates to: RGGDPPASHAGDPEGAFSSSVGT*CVSCCA
Trigger: GGCACAACAGGAGACACAGCAGGTCCCCACAGAGGA...CGAGAAGGCTCCTTCCGGGTCACCCGCATGCGATGCTGGCGGGTCACCTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR CCA 90 bp AATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTCCTCCGCCCCTAGCATaGGGGACACAGGCACAGGGC +
Preference number: 2 (lower is better)
Translates to: NPLCSQPRGQGKVGYEAPPPPLA*GTQAQG
Trigger: GCCCTGTGCCTGTGTCCCCCATGCTAGGGGCGGAGG...AGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR TCA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCGGACCTTGCCTTGACTaGGGCACTTCACGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPGPCLD*GTSRAQ
Trigger: CTGAGCTCGTGAAGTGCCTCAGTCAAGGCAAGGTCC...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
3UTR-3UTR TCA 90 bp GCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTACAGGGGACCTTGCCTTaGCTGAGGCACTTCACGAGC +
Preference number: 2 (lower is better)
Translates to: AAQREIWFLPKAGSHGPLQGTLP*LRHFTS
Trigger: GCTCGTGAAGTGCCTCAGTCAAGGCAAGGTCCCCTG...TAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
3UTR-3UTR TCA 90 bp AAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCTGCTTGCTGGCTGTCTaGGCGTCTCAGAGTACCCCC +
Preference number: 2 (lower is better)
Translates to: KRPEAAQREIWFLPKAGSCLLAV*ASQSTP
Trigger: GGGGGTACTCTGAGACGCTCAGACAGCCAGCAAGCA...GCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR GCA 90 bp GCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTGGCACTGGCATCTGTaGTGGGACTGCCAATTCCCC +
Preference number: 2 (lower is better)
Translates to: ARSGPEGDMVPPQGRQPWWHWHL*WDCQFP
Trigger: GGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCA...CCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp GTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGACATCCCCTTGGCCTTTaGCCCATGGCTCCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: VQPAQGTRKGRIRGPWPRHPLGL*PMAPRG
Trigger: GCCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATG...TCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR CCA 90 bp CGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGGACTGCCCTTCTCGGAGTTGCTaGCCAGGCAGGCGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: RRRNCRGHHWHWHLCWDCPSRSC*PGRRSC
Trigger: GCAGCTCCGCCTGCCTGGCCAGCAACTCCGAGAAGG...GCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR CAA 90 bp AACTGGGCCAGACCAAACACAGACCTCTGCCCATCCCCTTGGCCTTaGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATA +
Preference number: 2 (lower is better)
Translates to: NWARPNTDLCPSPWP*AHGSKRPEAAQREI
Trigger: TATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATGGGCAGAGGTCTGTGTTTGGTCTGGCCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR TCA 90 bp GTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGGACCTTGCCTTGACTaGGGCACTTCACGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: VQPAQGTRKGRIRGPWPRGPCLD*GTSRAQ
Trigger: CTGAGCTCGTGAAGTGCCTCAGTCAAGGCAAGGTCC...TCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
3UTR-3UTR TCA 90 bp TGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGCCGGGTGGCATCAGGTaGCTCAAGCAGTGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: CPRRRNCRGHHWHWHLCWPGGIR*LKQWWG
Trigger: TCCCCACCACTGCTTGAGTCACCTGATGCCACCCGG...CCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR GCA 90 bp CCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCATCCTCTGTGGGGACCTaGTGTGTCTCCTGTTGTGCC +
Preference number: 2 (lower is better)
Translates to: PMAPRGQKRPRGRYGSSPSSVGT*CVSCCA
Trigger: GGCACAACAGGAGACACAGCAGGTCCCCACAGAGGA...TGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR CCA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCAGGACACTTCCTCTGTaGGGACCTGCTGTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPRTLPL*GPAVSP
Trigger: AGGAGACACAGCAGGTCCCCACAGAGGAAGTGTCCT...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR TCA 90 bp GATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCAAAAGGCGGAGCTGCAGGCTaGGCTCACTGTTGCCCGCGC +
Preference number: 2 (lower is better)
Translates to: DMVPPQGRQPWSLRLCAKGGAAG*AHCCPR
Trigger: GCGCGGGCAACAGTGAGCTCAGCCTGCAGCTCCGCC...TTTTGCACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR GCA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCGGCCTGGGCTGCTCGTaGTTCCACTGGGCAATGGTA +
Preference number: 2 (lower is better)
Translates to: WHRGPALKREGAILCAASGLGCS*FHWAMV
Trigger: TACCATTGCCCAGTGGAAGCACGAGCAGCCCAGGCC...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp TGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGGCCCAGAGGGAGATATaGTTCCTCCCCAAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: CPRRRNCRGHHWHWHLCWAQREI*FLPKAG
Trigger: GCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGC...CCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCGCTTCCACTGGGCAATaGTACAGAGGAGGTGACCCG +
Preference number: 2 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGASTGQ*YRGGDP
Trigger: CGGGTCACCTCCTCTGTACCATTGCCCAGTGGAAGC...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp GCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGCTCATCATGATAGCCTaGGGGCTAGTGATGGTGACC +
Preference number: 2 (lower is better)
Translates to: ARSGPEGDMVPPQGRQPWLIMIA*GLVMVT
Trigger: GGTCACCATCACTAGCCCCCAGGCTATCATGATGAG...CCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGCTGCTCCCAAGCAATaGGTCTTGCCGAACCTGTGG +
Preference number: 2 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYAAPKQ*VLPNLW
Trigger: CCACAGGTTCGGCAAGACCCATTGCTTGGGAGCAGC...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440760.5
3UTR-3UTR TCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATATCGAGGGCCAGCTCTaGAAAGAGAAGGGGCAATCC +
Preference number: 2 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYIEGQL*KEKGQS
Trigger: GGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGAT...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR TCA 90 bp GCACTGGCATCTGTGCTGGGACTGCCAATTCCCCGCAAGCTCACGGCACTCAGCGACGCAGGAAACTGTTaGAAGTCTCGCTGCTCCCAA +
Preference number: 2 (lower is better)
Translates to: ALASVLGLPIPRKLTALSDAGNC*KSRCSQ
Trigger: TTGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTC...GCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR TCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATCTTTCTGCCCGTTGCTaGGCAGCACTTCCAAGGACA +
Preference number: 2 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYLSARC*AALPRT
Trigger: TGTCCTTGGAAGTGCTGCTCAGCAACGGGCAGAAAG...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR TCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCGACTCCGAAGGCTGGTaGCAGACACATAAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGDSEGW*QTHKAA
Trigger: AGCTGCCTTATGTGTCTGTCACCAGCCTTCGGAGTC...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp GAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTCCGGGTGGCATCAGGTaGCTCAAGCAGTGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: EGDMVPPQGRQPWSLRLCPGGIR*LKQWWG
Trigger: TCCCCACCACTGCTTGAGTCACCTGATGCCACCCGG...ACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp GTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGGTAAAGGGAGACACTaGTGTCCACGTGTAGGGAAG +
Preference number: 2 (lower is better)
Translates to: VQPAQGTRKGRIRGPWPRGKGRH*CPRVGK
Trigger: CTTCCCTACACGTGGACATCAGTGTCTCCCTTTACC...TCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440760.5
3UTR-3UTR GCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATCCAAACACAGACCTCTaGCCATCCCCTTGGCCTTTG +
Preference number: 2 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYPNTDL*PSPWPL
Trigger: CAAAGGCCAAGGGGATGGGCAGAGGTCTGTGTTTGG...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR GCA 90 bp TTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCATCTGTGCTGGGACTaGCAATTCCCCGCAAGCTCA +
Preference number: 2 (lower is better)
Translates to: LAHGSKRPEAAQREIWFLHLCWD*QFPASS
Trigger: TGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATG...GAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp CAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCTCTCTTGCAGAGATTTaGGTTGCCGGTGCTGTTCCT +
Preference number: 2 (lower is better)
Translates to: QKRPRGRYGSSPRQAAMVSLAEI*VAGAVP
Trigger: AGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGA...GACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR GCA 90 bp GAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTAGGGGCAATCCTCTGTaGAGCCAGCCCAGGGGACAA +
Preference number: 2 (lower is better)
Translates to: EGDMVPPQGRQPWSLRLCRGNPL*SQPRGQ
Trigger: TTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCCCT...ACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR GCA 90 bp GTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGATTGACCAGAACTTTCTaGCCGTTGCTGAGCAGCACT +
Preference number: 2 (lower is better)
Translates to: VQPAQGTRKGRIRGPWPRLTRTF*PLLSST
Trigger: AGTGCTGCTCAGCAACGGGCAGAAAGTTCTGGTCAA...TCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR CCA 90 bp ATCATGATAGCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCGCTTCCACTGGGCAATaGTACAGAGGAGGTGACCCG +
Preference number: 2 (lower is better)
Translates to: IMIAWGLVMVTHCSRSLLASTGQ*YRGGDP
Trigger: CGGGTCACCTCCTCTGTACCATTGCCCAGTGGAAGC...GAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGCTATCATGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCTGCTCGTGCTTCCACTaGGCAATGGTACAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: WHRGPALKREGAILCAASCSCFH*AMVQRR
Trigger: CCTCCTCTGTACCATTGCCCAGTGGAAGCACGAGCA...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp TTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCGACTTCACTGCTTGCTaGCTGTCTGAGCGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: LAHGSKRPEAAQREIWFLDFTAC*LSERLR
Trigger: TCTGAGACGCTCAGACAGCCAGCAAGCAGTGAAGTC...GAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR CAA 90 bp ATGATAGCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTaGCTCATGAGGTATTCAAAAGCCAGTTCCAGGCGCACCTCACCC +
Preference number: 2 (lower is better)
Translates to: MIAWGLVMVTHCSRS*LMRYSKASSRRTSP
Trigger: GGGTGAGGTGCGCCTGGAACTGGCTTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGCTATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp ATCATGATAGCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCATCGAGGGCCAGCTCTaGAAAGAGAAGGGGCAATCC +
Preference number: 2 (lower is better)
Translates to: IMIAWGLVMVTHCSRSLLIEGQL*KEKGQS
Trigger: GGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGAT...GAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGCTATCATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp GATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCAAAAGGGAAGCAGGGGCAGTaGGAGGGAACCAGAGGTAGG +
Preference number: 2 (lower is better)
Translates to: DMVPPQGRQPWSLRLCAKGKQGQ*EGTRGR
Trigger: CCTACCTCTGGTTCCCTCTCACTGCCCCTGCTTCCC...TTTTGCACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
3UTR-3UTR TCA 90 bp GGACACAGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACACAGGGGACCTTGCCTTaGCTGAGGCACTTCACGAGC +
Preference number: 2 (lower is better)
Translates to: GHRHRASFCKFLWGRGQTQGTLP*LRHFTS
Trigger: GCTCGTGAAGTGCCTCAGTCAAGGCAAGGTCCCCTG...TGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
3UTR-3UTR TCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATTCTCTTGCAGAGATTTaGGTTGCCGGTGCTGTTCCT +
Preference number: 2 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYSLAEI*VAGAVP
Trigger: AGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGA...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR GCA 90 bp GGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGCCATAGTGCCGCAGCGTCTCCAAACACAGACCTCTaGCCATCCCCTTGGCCTTTG +
Preference number: 2 (lower is better)
Translates to: GSQPHRHQSASSHSAAASPNTDL*PSPWPL
Trigger: CAAAGGCCAAGGGGATGGGCAGAGGTCTGTGTTTGG...AGACGCTGCGGCACTATGGCTACTTGCGCTTTGATGCCTGTGTGGCTGACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR GCA 90 bp TTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCTTGACCAGAACTTTCTaGCCGTTGCTGAGCAGCACT +
Preference number: 2 (lower is better)
Translates to: LAHGSKRPEAAQREIWFLLTRTF*PLLSST
Trigger: AGTGCTGCTCAGCAACGGGCAGAAAGTTCTGGTCAA...GAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR GCA 90 bp TTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCGATCCTCATCTCCAATaGCCTCGAAGGCGAAATTGC +
Preference number: 2 (lower is better)
Translates to: LAHGSKRPEAAQREIWFLDPHLQ*PRRRNC
Trigger: GCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATC...GAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp AGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTTTCTGTAAATTCCTCTaGGGTAGAGGGCAGACATCC +
Preference number: 2 (lower is better)
Translates to: SGPEGDMVPPQGRQPWSLFCKFL*GRGQTS
Trigger: GGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAA...AAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR CCA 90 bp TCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGTTCTGTAAATTCCTCTaGGGTAGAGGGCAGACATCC +
Preference number: 2 (lower is better)
Translates to: SSVQPAQGTRKGRIRGPWFCKFL*GRGQTS
Trigger: GGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAA...CCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR CCA 90 bp TTGCTGAGCAGCACTTCCAAGGACACTTCCTCTGTGGGGACCTGCTGTGTCTCCGCTGCTCCCAAGCAATaGGTCTTGCCGAACTCACTC +
Preference number: 2 (lower is better)
Translates to: LLSSTSKDTSSVGTCCVSAAPKQ*VLPNSL
Trigger: GAGTGAGTTCGGCAAGACCCATTGCTTGGGAGCAGC...GGAGACACAGCAGGTCCCCACAGAGGAAGTGTCCTTGGAAGTGCTGCTCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427123.5
3UTR-3UTR CCA 90 bp TGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGCTCATCATGATAGCCTaGGGGCTAGTGATGGTGACC +
Preference number: 2 (lower is better)
Translates to: CPRRRNCRGHHWHWHLCWLIMIA*GLVMVT
Trigger: GGTCACCATCACTAGCCCCCAGGCTATCATGATGAG...CCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp GAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTCACTGGCATCTGTGCTaGGACTGCCAATTCCCCGCA +
Preference number: 2 (lower is better)
Translates to: EGDMVPPQGRQPWSLRLCHWHLC*DCQFPA
Trigger: TGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTG...ACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp AAAGCGCAAGTAGCCATAGTGCCGCAGCGTCTGGGCCAGTCTCAGGAACTCCTTGACGCAGGAAACTGTTaGAAGTCTCGCTGCTCCCAA +
Preference number: 2 (lower is better)
Translates to: KAQVAIVPQRLGQSQELLDAGNC*KSRCSQ
Trigger: TTGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTC...AAGGAGTTCCTGAGACTGGCCCAGACGCTGCGGCACTATGGCTACTTGCGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR TCA 90 bp CAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGACTCCGAAGGCTGGTaGCAGACACATAAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: QREIWFLPKAGSHGPLDFDSEGW*QTHKAA
Trigger: AGCTGCCTTATGTGTCTGTCACCAGCCTTCGGAGTC...AAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp AATGGTACAGAGGAGGTGACCCGCCAGCATCGCATGCGGGTGACCCGGAAGGAGACAATCTTATACTCTTaGCTCCGAAGGCTGGTGACA +
Preference number: 2 (lower is better)
Translates to: NGTEEVTRQHRMRVTRKETILYS*LRRLVT
Trigger: TGTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGT...CTCCTTCCGGGTCACCCGCATGCGATGCTGGCGGGTCACCTCCTCTGTACCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp GGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATTCAAAAATGGTACAGAGGAGGTaGCCCGCCAGCATCGCATGC +
Preference number: 2 (lower is better)
Translates to: GLVMVTHCSRSLLMRYSKMVQRR*PASIAC
Trigger: GCATGCGATGCTGGCGGGTCACCTCCTCTGTACCAT...TTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR GCA 90 bp ATCATGATAGCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCTGGAAGATCCAGCTTTaGAGCTACAGCCTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: IMIAWGLVMVTHCSRSLLWKIQL*SYSLQD
Trigger: GTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCA...GAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGCTATCATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR GCA 90 bp GCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATTGCAGAGATTTGAGTTaGCGGTGCTGTTCCTTGGTG +
Preference number: 2 (lower is better)
Translates to: AWGLVMVTHCSRSLLMRYCRDLS*RCCSLV
Trigger: CACCAAGGAACAGCACCGGCAACTCAAATCTCTGCA...ATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR GCA 90 bp AGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATTCATCAACCATGGACTaGAAGCAGATGCTCATCATG +
Preference number: 2 (lower is better)
Translates to: RPEAAQREIWFLPKAGSHSSTMD*KQMLIM
Trigger: CATGATGAGCATCTGCTTGCAGTCCATGGTTGATGA...ATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGGCCCAGAGGGAGATATaGTTCCTCCCCAAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKAQREI*FLPKAG
Trigger: GCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGC...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR CCA 90 bp CACGCTCAATATCTGATACCGTCTGAGCATAAAGCAGGTTCAGGCCAACCCGGTCATCCCCTTGGCCTTTaGCCCATGGCTCCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: HAQYLIPSEHKAGSGQPGHPLGL*PMAPRG
Trigger: GCCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATG...ACCGGGTTGGCCTGAACCTGCTTTATGCTCAGACGGTATCAGATATTGAGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR CCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATTTAATGATGGGGAACTaGGCCAGACCAAACACAGAC +
Preference number: 2 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYLMMGN*ARPNTD
Trigger: GTCTGTGTTTGGTCTGGCCCAGTTCCCCATCATTAA...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR CAA 90 bp AGTGGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATaGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGGACTGCCA +
Preference number: 2 (lower is better)
Translates to: SGDYRSSSPMPSKAK*PWTSLALASVLGLP
Trigger: TGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp TTTGGCCTTACCCTTAGCATAGTAGTCCATGCTGTGATGGGGGAAGCAGGGGCAATCGAGGGCCAGCTCTaGAAAGAGAAGGGGCAATCC +
Preference number: 2 (lower is better)
Translates to: FGLTLSIVVHAVMGEAGAIEGQL*KEKGQS
Trigger: GGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGAT...TGCCCCTGCTTCCCCCATCACAGCATGGACTACTATGCTAAGGGTAAGGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
3UTR-3UTR TCA 90 bp CTGTGCTGGGACTGCCAATTCCCCGCAAGCTCACGGCACTCAGCTTACTTGAGACTGAAGTTAGCACGTTaGCCAGAACTTTCTGCCCGT +
Preference number: 2 (lower is better)
Translates to: LCWDCQFPASSRHSAYLRLKLAR*PELSAR
Trigger: ACGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAG...TCTCAAGTAAGCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR TCA 90 bp TCCAATGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTCCGAACCTGTGGCAGTaGTTAAAGGGGAACTACAGC +
Preference number: 2 (lower is better)
Translates to: SNALEGEIAVDITGTGICPNLWQ*LKGNYS
Trigger: GCTGTAGTTCCCCTTTAATCACTGCCACAGGTTCGG...ACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440760.5
3UTR-3UTR GCA 90 bp GATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCAAAAGGGGACTTCACTGCTTaGTGGCTGTCTGAGCGTCTC +
Preference number: 2 (lower is better)
Translates to: DMVPPQGRQPWSLRLCAKGDFTA*WLSERL
Trigger: GAGACGCTCAGACAGCCAGCAAGCAGTGAAGTCCCC...TTTTGCACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCTTCTGTAAATTCCTCTaGGGTAGAGGGCAGACATCC +
Preference number: 2 (lower is better)
Translates to: WHRGPALKREGAILCAASFCKFL*GRGQTS
Trigger: GGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAA...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR CCA 90 bp TTACTTGAGAGTTTGACCATAGACTCCCGGGTGGCATCAGGTGACTCAAGCAGTGCCCAGAGGGAGATATaGTTCCTCCCCAAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: LLESLTIDSRVASGDSSSAQREI*FLPKAG
Trigger: GCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGC...ACTGCTTGAGTCACCTGATGCCACCCGGGAGTCTATGGTCAAACTCTCAAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp CAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTAGGACAGTCCTTTTCTaGGAAGTCAGCCACACAGGC +
Preference number: 2 (lower is better)
Translates to: QREIWFLPKAGSHGPLDFRTVLF*EVSHTG
Trigger: GCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCT...AAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp CTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAATCGAGGGCCAGCTCTaGAAAGAGAAGGGGCAATCC +
Preference number: 2 (lower is better)
Translates to: LIWHRGPALKREGAILCAIEGQL*KEKGQS
Trigger: GGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGAT...TGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR TCA 90 bp CACGCTCAATATCTGATACCGTCTGAGCATAAAGCAGGTTCAGGCCAACCCGGTCTTTCTGCCCGTTGCTaGGCAGCACTTCCAAGGACA +
Preference number: 2 (lower is better)
Translates to: HAQYLIPSEHKAGSGQPGLSARC*AALPRT
Trigger: TGTCCTTGGAAGTGCTGCTCAGCAACGGGCAGAAAG...ACCGGGTTGGCCTGAACCTGCTTTATGCTCAGACGGTATCAGATATTGAGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR TCA 90 bp CTGTGCTGGGACTGCCAATTCCCCGCAAGCTCACGGCACTCAGCTTACTTGAGACCCACGCTCAATATCTaGTACCGTCTGAGCATAAAG +
Preference number: 2 (lower is better)
Translates to: LCWDCQFPASSRHSAYLRPTLNI*YRLSIK
Trigger: CTTTATGCTCAGACGGTATCAGATATTGAGCGTGGG...TCTCAAGTAAGCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR TCA 90 bp GGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGCCATAGTGCCGCAGCGTCTCCCACGCTCAATATCTaGTACCGTCTGAGCATAAAG +
Preference number: 2 (lower is better)
Translates to: GSQPHRHQSASSHSAAASPTLNI*YRLSIK
Trigger: CTTTATGCTCAGACGGTATCAGATATTGAGCGTGGG...AGACGCTGCGGCACTATGGCTACTTGCGCTTTGATGCCTGTGTGGCTGACTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR GCA 90 bp ACCCGCCGGCGCAGCATCTTCCTGATACTGCCGCCAGATTTCTTCACCATCAGTCCAAGCAATGGGTCTTaGCGAACTCACTCACTGTTT +
Preference number: 2 (lower is better)
Translates to: TRRRSIFLILPPDFFTISPSNGS*RTHSLF
Trigger: AAACAGTGAGTGAGTTCGGCAAGACCCATTGCTTGG...ACTGATGGTGAAGAAATCTGGCGGCAGTATCAGGAAGATGCTGCGCCGGCGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427123.5
3UTR-3UTR GCA 90 bp GAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGATCCTCATCTCCAATaGCCTCGAAGGCGAAATTGC +
Preference number: 2 (lower is better)
Translates to: EGDMVPPQGRQPWSLRLCDPHLQ*PRRRNC
Trigger: GCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATC...ACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp TCCTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTTGCATCCCCTTGGCCTTTaGCCCATGGCTCCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: SFLETFSCRDLSCRCCSLHPLGL*PMAPRG
Trigger: GCCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATG...CAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp ACCCGCCGGCGCAGCATCTTCCTGATACTGCCGCCAGATTTCTTCACCATCAGTTTAATGATGGGGAACTaGGCCAGACCAAACACAGAC +
Preference number: 2 (lower is better)
Translates to: TRRRSIFLILPPDFFTISLMMGN*ARPNTD
Trigger: GTCTGTGTTTGGTCTGGCCCAGTTCCCCATCATTAA...ACTGATGGTGAAGAAATCTGGCGGCAGTATCAGGAAGATGCTGCGCCGGCGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGTGCTCGTGCTTCCACTaGGCAATGGTACAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKCSCFH*AMVQRR
Trigger: CCTCCTCTGTACCATTGCCCAGTGGAAGCACGAGCA...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp CATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCATCAGTTCATCAACCATaGACTGCAAGCAGATGCTCA +
Preference number: 2 (lower is better)
Translates to: HRGPALKREGAILCAASPSVHQP*TASRCS
Trigger: TGAGCATCTGCTTGCAGTCCATGGTTGATGAACTGA...TGGGCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp CTCCTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTTGGTGCTGTTCCTTGGTaGCCAAGATCCACCCACGCT +
Preference number: 2 (lower is better)
Translates to: LLLGDFLLQRFELPVLFLGAVPW*PRSTHA
Trigger: AGCGTGGGTGGATCTTGGTCACCAAGGAACAGCACC...AAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp GCACTCAGCTTACTTGAGAGTTTGACCATAGACTCCCGGGTGGCATCAGGTGACCCCACGCTCAATATCTaGTACCGTCTCTTCCTTAGC +
Preference number: 2 (lower is better)
Translates to: ALSLLESLTIDSRVASGDPTLNI*YRLFLS
Trigger: GCTAAGGAAGAGACGGTATCAGATATTGAGCGTGGG...GTCACCTGATGCCACCCGGGAGTCTATGGTCAAACTCTCAAGTAAGCTGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453453.1
3UTR-3UTR GCA 90 bp CTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCACTGTGTCTCCTGTTGTaGCCGACGCAGGAAACTGTT +
Preference number: 2 (lower is better)
Translates to: LIWHRGPALKREGAILCALCLLL*PTQETV
Trigger: AACAGTTTCCTGCGTCGGGCACAACAGGAGACACAG...TGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR GCA 90 bp ATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATTCAAAAGCCAGTTCCTGGAAGATCCAGCTTTaGAGCTACAGCCTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: MVTHCSRSLLMRYSKASSWKIQL*SYSLQD
Trigger: GTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCA...GGAACTGGCTTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp CTGTGCTGGGACTGCCAATTCCCCGCAAGCTCACGGCACTCAGCTTACTTGAGATCCAATCAAGTCATCTaGAAGATCCAGCTTTGCAGC +
Preference number: 2 (lower is better)
Translates to: LCWDCQFPASSRHSAYLRSNQVI*KIQLCS
Trigger: GCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGA...TCTCAAGTAAGCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp CTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAAAGGCGAAATTGCCGTaGACATCACTGGCACTGGCA +
Preference number: 2 (lower is better)
Translates to: LIWHRGPALKREGAILCAKAKLP*TSLALA
Trigger: TGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTT...TGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp CTTATACTCTTGACTCCGAAGGCTGGTGACAGACACATAAGGCAGCTCAAACTCATCGAGGGCCAGCTCTaGAAAGAGAAGGGGCAATCC +
Preference number: 2 (lower is better)
Translates to: LILLTPKAGDRHIRQLKLIEGQL*KEKGQS
Trigger: GGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGAT...GAGTTTGAGCTGCCTTATGTGTCTGTCACCAGCCTTCGGAGTCAAGAGTATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR TCA 90 bp TTACTTGAGAGTTTGACCATAGACTCCCGGGTGGCATCAGGTGACTCAAGCAGTCAACCCGGTTCTCCATaGCATCGTCATCATAGGCAG +
Preference number: 2 (lower is better)
Translates to: LLESLTIDSRVASGDSSSQPGSP*HRHHRQ
Trigger: CTGCCTATGATGACGATGTCATGGAGAACCGGGTTG...ACTGCTTGAGTCACCTGATGCCACCCGGGAGTCTATGGTCAAACTCTCAAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR GCA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGTGCAGAGATTTGAGTTaGCGGTGCTGTTCCTTGGTG +
Preference number: 2 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKCRDLS*RCCSLV
Trigger: CACCAAGGAACAGCACCGGCAACTCAAATCTCTGCA...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp TCCTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTTGAGGACACTTCCTCTGTaGGGACCTGCTGTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: SFLETFSCRDLSCRCCSLRTLPL*GPAVSP
Trigger: AGGAGACACAGCAGGTCCCCACAGAGGAAGTGTCCT...CAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR CAA 90 bp TCTCAGGAACTCCTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTaGCCGGTGCTGTTCCTTGGTGACCAAGATCCACCCACGCTCAAT +
Preference number: 2 (lower is better)
Translates to: SQELLLGDFLLQRFE*PVLFLGDQDPPTLN
Trigger: ATTGAGCGTGGGTGGATCTTGGTCACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR GCA 90 bp GGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGCCATAGTGCCGCAGCGTCTAACTCACTCACTGTTTaGATAAATTCTTCACCTGCC +
Preference number: 2 (lower is better)
Translates to: GSQPHRHQSASSHSAAASNSLTV*INSSPA
Trigger: GGCAGGTGAAGAATTTATGCAAACAGTGAGTGAGTT...AGACGCTGCGGCACTATGGCTACTTGCGCTTTGATGCCTGTGTGGCTGACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427123.5
3UTR-3UTR GCA 90 bp AGTATCCAATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGACTGTGTCTCCTGTTGTaGCCGACGCAGGAAACTGTT +
Preference number: 2 (lower is better)
Translates to: SIQSSHLEDPALQLQPPGLCLLL*PTQETV
Trigger: AACAGTTTCCTGCGTCGGGCACAACAGGAGACACAG...TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR GCA 90 bp TCCAATGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGGCAGCTCAAACTCTTaGAACTTCCGTACAAAAGAA +
Preference number: 2 (lower is better)
Translates to: SNALEGEIAVDITGTGICGSSNS*NFRTKE
Trigger: TTCTTTTGTACGGAAGTTGCAAGAGTTTGAGCTGCC...ACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp CACAGGACAGTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGCAAGTATTCTGTAAATTCCTCTaGGGTAGAGGGCAGACATCC +
Preference number: 2 (lower is better)
Translates to: HRTVLFWEVSHTGIKAQVFCKFL*GRGQTS
Trigger: GGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAA...TACTTGCGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp ATACTAAATGCTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATGCTTCCACTGGGCAATaGTACAGAGGAGGTGACCCG +
Preference number: 2 (lower is better)
Translates to: ILNANLASRASSEKRRGNASTGQ*YRGGDP
Trigger: CGGGTCACCTCCTCTGTACCATTGCCCAGTGGAAGC...ATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR CAA 90 bp TTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTaGGTGACCAAGATCCACCCACGCTCAATATCTGATACCGTCTCT +
Preference number: 2 (lower is better)
Translates to: LETFSCRDLSCRCCS*VTKIHPRSISDTVS
Trigger: AGAGACGGTATCAGATATTGAGCGTGGGTGGATCTTGGTCACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453453.1
3UTR-3UTR TCA 90 bp CTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTTGGTGACAGGACATCCTCAGTCTaGTCTGAAGTTAGCACGTTG +
Preference number: 2 (lower is better)
Translates to: LGDFLLQRFELPVLFLGDRTSSV*SEVSTL
Trigger: CAACGTGCTAACTTCAGATCAGACTGAGGATGTCCT...GTCACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR TCA 90 bp ATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATTCAAAAGCCAGTTCCACAATCTTATACTCTTaGCTCCGAAGGCTGGTGACA +
Preference number: 2 (lower is better)
Translates to: MVTHCSRSLLMRYSKASSTILYS*LRRLVT
Trigger: TGTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGT...GGAACTGGCTTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR GCA 90 bp AGGAACTCCTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTCATAAATTCTTCACCTaGCCCACCCTTGGCTGCCAT +
Preference number: 2 (lower is better)
Translates to: RNSFLETFSCRDLSCRCCHKFFT*PTLGCH
Trigger: ATGGCAGCCAAGGGTGGGGCAGGTGAAGAATTTATG...ACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427123.5
3UTR-3UTR CCA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGATGCTGAATTGGCAATaGCAGGCAATTTGGCCTTAC +
Preference number: 2 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKMLNWQ*QAIWPY
Trigger: GTAAGGCCAAATTGCCTGCCATTGCCAATTCAGCAT...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
3UTR-3UTR CCA 90 bp CTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCATCAGGAACTCCTTCTTaGAGACTTTCTCTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: LIWHRGPALKREGAILCASGTPS*RLSLAE
Trigger: CTCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGA...TGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp GTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGCCATAGTGTCAGGAACTCCTTCTTaGAGACTTTCTCTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: VLFWEVSHTGIKAQVAIVSGTPS*RLSLAE
Trigger: CTCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGA...CACTATGGCTACTTGCGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp ATAAAGCAGGTTCAGGCCAACCCGGTTCTCCATGACATCGTCATCATAGGCAGATCCAATCAAGTCATCTaGAAGATCCAGCTTTGCAGC +
Preference number: 2 (lower is better)
Translates to: IKQVQANPVLHDIVIIGRSNQVI*KIQLCS
Trigger: GCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGA...TCTGCCTATGATGACGATGTCATGGAGAACCGGGTTGGCCTGAACCTGCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR TCA 90 bp TCCAAGCAGTGGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTACAATCTTATACTCTTaGCTCCGAAGGCTGGTGACA +
Preference number: 2 (lower is better)
Translates to: SKQWRLQILISNALEGEITILYS*LRRLVT
Trigger: TGTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGT...AATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR GCA 90 bp TTACTTGAGAGTTTGACCATAGACTCCCGGGTGGCATCAGGTGACTCAAGCAGTGGCAGCTCAAACTCTTaGAACTTCCGTACAAAAGAA +
Preference number: 2 (lower is better)
Translates to: LLESLTIDSRVASGDSSSGSSNS*NFRTKE
Trigger: TTCTTTTGTACGGAAGTTGCAAGAGTTTGAGCTGCC...ACTGCTTGAGTCACCTGATGCCACCCGGGAGTCTATGGTCAAACTCTCAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CCA 90 bp TCCTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTTGTCCAATCAAGTCATCTaGAAGATCCAGCTTTGCAGC +
Preference number: 2 (lower is better)
Translates to: SFLETFSCRDLSCRCCSLSNQVI*KIQLCS
Trigger: GCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGA...CAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR GCA 72 bp GTTCCAGGCGCACCTCACCCCGGCCCCGGCCTGGGCTaGTCGTGCTTCCACTGGGCAATGGTACAGAGGAGG +
Preference number: 3 (lower is better)
Translates to: VPGAPHPGPGLG*SCFHWAMVQRR
Trigger: CCTCCTCTGTACCATTGCCCAGTGGAAGCACGAGCAGCCCAGGCCGGGGCCGGGGTGAGGTGCGCCTGGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATCCTCTGCCCATCCCCTaGGCCTTTGGCCCATGGCTC +
Preference number: 3 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYPLPIP*AFGPWL
Trigger: GAGCCATGGGCCAAAGGCCAAGGGGATGGGCAGAGG...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR CAA 90 bp CATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCAGGAGCCTTCTCGGAGTaGCTGGCCAGGCAGGCGGAG +
Preference number: 3 (lower is better)
Translates to: HRGPALKREGAILCAASPGAFSE*LARQAE
Trigger: CTCCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTCC...TGGGCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp AAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCCAGGGGACCTTGCCTaGACTGAGGCACTTCACGAG +
Preference number: 3 (lower is better)
Translates to: KRPEAAQREIWFLPKAGSPGDLA*TEALHE
Trigger: CTCGTGAAGTGCCTCAGTCAAGGCAAGGTCCCCTGG...GCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
3UTR-3UTR CAA 90 bp GCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTACCCTCGAAGGCGAAATaGCCGTGGACATCACTGGCA +
Preference number: 3 (lower is better)
Translates to: AAQREIWFLPKAGSHGPLPSKAK*PWTSLA
Trigger: TGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGG...TAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp ATCATGATAGCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCCCATCCCCTTGGCCTTaGGCCCATGGCTCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: IMIAWGLVMVTHCSRSLLPSPWP*AHGSKR
Trigger: CCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATGG...GAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGCTATCATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp CTGTGCTGGGACTGCCAATTCCCCGCAAGCTCACGGCACTCAGCTTACTTGAGACCATCCCCTTGGCCTTaGGCCCATGGCTCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: LCWDCQFPASSRHSAYLRPSPWP*AHGSKR
Trigger: CCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATGG...TCTCAAGTAAGCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCAGGGGACCTTGCCTaGACTGAGGCACTTCACGAG +
Preference number: 3 (lower is better)
Translates to: WHRGPALKREGAILCAASPGDLA*TEALHE
Trigger: CTCGTGAAGTGCCTCAGTCAAGGCAAGGTCCCCTGG...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
3UTR-3UTR CAA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATTGCCGGTGCTGTTCCTaGGTGACCAAGATCCACCCA +
Preference number: 3 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYCRCCS*VTKIHP
Trigger: TGGGTGGATCTTGGTCACCAAGGAACAGCACCGGCA...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp CCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGAGGCTGAGCTCACTGTaGCCCGCGCTCACCACCACA +
Preference number: 3 (lower is better)
Translates to: PHLQCPRRRNCRGHHWHWRLSSL*PALTTT
Trigger: TGTGGTGGTGAGCGCGGGCAACAGTGAGCTCAGCCT...CCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp GGACACAGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACAGGAGCCTTCTCGGAGTaGCTGGCCAGGCAGGCGGAG +
Preference number: 3 (lower is better)
Translates to: GHRHRASFCKFLWGRGQTGAFSE*LARQAE
Trigger: CTCCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTCC...TGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR GCA 72 bp CGTGGACATCACTGGCACTGGCATCTGTGCTGGGACTaGCAATTCCCCGCAAGCTCACGGCACTCAGCTTAC +
Preference number: 3 (lower is better)
Translates to: RGHHWHWHLCWD*QFPASSRHSAY
Trigger: GTAAGCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR GCA 72 bp CGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTaGTGGGACTGCCAATTCCCCGCAAGCTCACGGCAC +
Preference number: 3 (lower is better)
Translates to: RNCRGHHWHWHL*WDCQFPASSRH
Trigger: GTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR CCA 72 bp CCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTaGCATCTGTGCTGGGACTGCCAATTCCCCGCAAGC +
Preference number: 3 (lower is better)
Translates to: PRRRNCRGHHWH*HLCWDCQFPAS
Trigger: GCTTGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp TTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCGACGCAGGAAACTGTaGAAAGTCTCGCTGCTCCCA +
Preference number: 3 (lower is better)
Translates to: LAHGSKRPEAAQREIWFLRRRKL*KVSLLP
Trigger: TGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCG...GAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR CAA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGGGAGCCTTCTCGGAGTaGCTGGCCAGGCAGGCGGAG +
Preference number: 3 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKGAFSE*LARQAE
Trigger: CTCCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTCC...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp CTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCACCTCTGCCCATCCCCTaGGCCTTTGGCCCATGGCTC +
Preference number: 3 (lower is better)
Translates to: LIWHRGPALKREGAILCAPLPIP*AFGPWL
Trigger: GAGCCATGGGCCAAAGGCCAAGGGGATGGGCAGAGG...TGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR CAA 90 bp CCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCTGCTGTGTCTCCTGTaGTGCCCGACGCAGGAAACT +
Preference number: 3 (lower is better)
Translates to: PHLQCPRRRNCRGHHWHWLLCLL*CPTQET
Trigger: AGTTTCCTGCGTCGGGCACAACAGGAGACACAGCAG...CCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR CAA 90 bp ACCCGCCGGCGCAGCATCTTCCTGATACTGCCGCCAGATTTCTTCACCATCAGTCTGCTGTGTCTCCTGTaGTGCCCGACGCAGGAAACT +
Preference number: 3 (lower is better)
Translates to: TRRRSIFLILPPDFFTISLLCLL*CPTQET
Trigger: AGTTTCCTGCGTCGGGCACAACAGGAGACACAGCAG...ACTGATGGTGAAGAAATCTGGCGGCAGTATCAGGAAGATGCTGCGCCGGCGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR CCA 72 bp CAATGCCCTCGAAGGCGAAATTGCCGTGGACATCACTaGCACTGGCATCTGTGCTGGGACTGCCAATTCCCC +
Preference number: 3 (lower is better)
Translates to: QCPRRRNCRGHH*HWHLCWDCQFP
Trigger: GGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp TTGCTGAGCAGCACTTCCAAGGACACTTCCTCTGTGGGGACCTGCTGTGTCTCCCGACGCAGGAAACTGTaGAAAGTCTCGCTGCTCCCA +
Preference number: 3 (lower is better)
Translates to: LLSSTSKDTSSVGTCCVSRRRKL*KVSLLP
Trigger: TGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCG...GGAGACACAGCAGGTCCCCACAGAGGAAGTGTCCTTGGAAGTGCTGCTCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR CAA 90 bp ACCCGCCGGCGCAGCATCTTCCTGATACTGCCGCCAGATTTCTTCACCATCAGTCTGGAAGATCCAGCTTaGCAGCTACAGCCTCCAGGA +
Preference number: 3 (lower is better)
Translates to: TRRRSIFLILPPDFFTISLEDPA*QLQPPG
Trigger: TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAG...ACTGATGGTGAAGAAATCTGGCGGCAGTATCAGGAAGATGCTGCGCCGGCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp ATCATGATAGCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCCTGGAAGATCCAGCTTaGCAGCTACAGCCTCCAGGA +
Preference number: 3 (lower is better)
Translates to: IMIAWGLVMVTHCSRSLLLEDPA*QLQPPG
Trigger: TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAG...GAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGCTATCATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp AAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCTCAGGAACTCCTTCTaGGAGACTTTCTCTTGCAGA +
Preference number: 3 (lower is better)
Translates to: KRPEAAQREIWFLPKAGSLRNSF*ETFSCR
Trigger: TCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGAG...GCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR TCA 72 bp GCTGTGTCTCCTGTTGTGCCCGACGCAGGAAACTGTTaGAAGTCTCGCTGCTCCCAAGCAATGGGTCTTGCC +
Preference number: 3 (lower is better)
Translates to: AVSPVVPDAGNC*KSRCSQAMGLA
Trigger: GGCAAGACCCATTGCTTGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCGGGCACAACAGGAGACACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR CCA 72 bp GTTGCCCGCGCTCACCACCACAGGACAGTCCTTTTCTaGGAAGTCAGCCACACAGGCATCAAAGCGCAAGTA +
Preference number: 3 (lower is better)
Translates to: VARAHHHRTVLF*EVSHTGIKAQV
Trigger: TACTTGCGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCTGTGGTGGTGAGCGCGGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR CCA 72 bp TCCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGTaGACATCACTGGCACTGGCATCTGTGCTGGGACTG +
Preference number: 3 (lower is better)
Translates to: SSSPMPSKAKLP*TSLALASVLGL
Trigger: CAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp CAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCATACTAAATGCTAATTaGGCATCGAGGGCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: QKRPRGRYGSSPRQAAMVILNAN*ASRASS
Trigger: AGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT...GACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR CAA 90 bp TCCTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTTGCCTCTGCCCATCCCCTaGGCCTTTGGCCCATGGCTC +
Preference number: 3 (lower is better)
Translates to: SFLETFSCRDLSCRCCSLPLPIP*AFGPWL
Trigger: GAGCCATGGGCCAAAGGCCAAGGGGATGGGCAGAGG...CAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp ATCATGATAGCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCCCCAAGCAATGGGTCTaGCCGAACTCACTCACTGTT +
Preference number: 3 (lower is better)
Translates to: IMIAWGLVMVTHCSRSLLPKQWV*PNSLTV
Trigger: AACAGTGAGTGAGTTCGGCAAGACCCATTGCTTGGG...GAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGCTATCATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427123.5
3UTR-3UTR CAA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATCACAATCTTATACTCTaGACTCCGAAGGCTGGTGAC +
Preference number: 3 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYHNLIL*TPKAGD
Trigger: GTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGTG...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp GCACTCAGCTTACTTGAGAGTTTGACCATAGACTCCCGGGTGGCATCAGGTGACTGCCGGTGCTGTTCCTaGGTGACCAAGATCCACCCA +
Preference number: 3 (lower is better)
Translates to: ALSLLESLTIDSRVASGDCRCCS*VTKIHP
Trigger: TGGGTGGATCTTGGTCACCAAGGAACAGCACCGGCA...GTCACCTGATGCCACCCGGGAGTCTATGGTCAAACTCTCAAGTAAGCTGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR GCA 72 bp ACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTaGCGTGGACATCACTGGCACTGGCATCTGTGCTGG +
Preference number: 3 (lower is better)
Translates to: TDPHLQCPRRRN*RGHHWHWHLCW
Trigger: CCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp CGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGGACTGCCTTGGAGACTTTCTCTaGCAGAGATTTGAGTTGCCG +
Preference number: 3 (lower is better)
Translates to: RRRNCRGHHWHWHLCWDCLGDFL*QRFELP
Trigger: CGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAG...GCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp TCCAAGCAGTGGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTAGGCTGAGCTCACTGTaGCCCGCGCTCACCACCACA +
Preference number: 3 (lower is better)
Translates to: SKQWRLQILISNALEGEIRLSSL*PALTTT
Trigger: TGTGGTGGTGAGCGCGGGCAACAGTGAGCTCAGCCT...AATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp TGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGCACTGTAGCCGGTCCTaGCTCATGAGGTATTCAAAA +
Preference number: 3 (lower is better)
Translates to: CPRRRNCRGHHWHWHLCWHCSRS*LMRYSK
Trigger: TTTTGAATACCTCATGAGCAAGGACCGGCTACAGTG...CCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp AATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTATACTAAATGCTAATTaGGCATCGAGGGCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: NPLCSQPRGQGKVGYEAPILNAN*ASRASS
Trigger: AGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT...AGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR-3UTR CAA 90 bp ATCATGATAGCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCCACAATCTTATACTCTaGACTCCGAAGGCTGGTGAC +
Preference number: 3 (lower is better)
Translates to: IMIAWGLVMVTHCSRSLLHNLIL*TPKAGD
Trigger: GTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGTG...GAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGCTATCATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR GCA 72 bp GCCGAACTCACTCACTGTTTGCATAAATTCTTCACCTaGCCCACCCTTGGCTGCCATCTAGGTGAGTCCAGT +
Preference number: 3 (lower is better)
Translates to: AELTHCLHKFFT*PTLGCHLGESS
Trigger: ACTGGACTCACCTAGATGGCAGCCAAGGGTGGGGCAGGTGAAGAATTTATGCAAACAGTGAGTGAGTTCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427123.5
3UTR-3UTR CAA 90 bp CACGCTCAATATCTGATACCGTCTGAGCATAAAGCAGGTTCAGGCCAACCCGGTAGAACTTTCTGCCCGTaGCTGAGCAGCACTTCCAAG +
Preference number: 3 (lower is better)
Translates to: HAQYLIPSEHKAGSGQPGRTFCP*LSSTSK
Trigger: CTTGGAAGTGCTGCTCAGCAACGGGCAGAAAGTTCT...ACCGGGTTGGCCTGAACCTGCTTTATGCTCAGACGGTATCAGATATTGAGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR-3UTR CAA 90 bp TCCAATGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTCACTGTAGCCGGTCCTaGCTCATGAGGTATTCAAAA +
Preference number: 3 (lower is better)
Translates to: SNALEGEIAVDITGTGICHCSRS*LMRYSK
Trigger: TTTTGAATACCTCATGAGCAAGGACCGGCTACAGTG...ACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp CTGTGTCTCCTGTTGTGCCCGACGCAGGAAACTGTTGAAAGTCTCGCTGCTCCCGAACTCACTCACTGTTaGCATAAATTCTTCACCTGC +
Preference number: 3 (lower is better)
Translates to: LCLLLCPTQETVESLAAPELTHC*HKFFTC
Trigger: GCAGGTGAAGAATTTATGCAAACAGTGAGTGAGTTC...GGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCGGGCACAACAGGAGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427123.5
3UTR-3UTR CAA 90 bp AGCAGTGGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGTTCTCTTGCAGAGATTaGAGTTGCCGGTGCTGTTCC +
Preference number: 3 (lower is better)
Translates to: SSGDYRSSSPMPSKAKLPFSCRD*SCRCCS
Trigger: GGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAA...CGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR GCA 72 bp GCCAGTCTCAGGAACTCCTTCTTGGAGACTTTCTCTTaGAGAGATTTGAGTTGCCGGTGCTGTTCCTTGGTG +
Preference number: 3 (lower is better)
Translates to: ASLRNSFLETFS*RDLSCRCCSLV
Trigger: CACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGAGACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR GCA 72 bp ATCCAAGCAGTGGAGATTACAGATCCTCATCTCCAATaGCCTCGAAGGCGAAATTGCCGTGGACATCACTGG +
Preference number: 3 (lower is better)
Translates to: IQAVEITDPHLQ*PRRRNCRGHHW
Trigger: CCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCTTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp GATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCAAAACACAATCTTATACTCTaGACTCCGAAGGCTGGTGAC +
Preference number: 3 (lower is better)
Translates to: DMVPPQGRQPWSLRLCAKHNLIL*TPKAGD
Trigger: GTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGTG...TTTTGCACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp GATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCAAAACTTGGAGACTTTCTCTaGCAGAGATTTGAGTTGCCG +
Preference number: 3 (lower is better)
Translates to: DMVPPQGRQPWSLRLCAKLGDFL*QRFELP
Trigger: CGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAG...TTTTGCACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp AGCAGTGGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGCTCAGGAACTCCTTCTaGGAGACTTTCTCTTGCAGA +
Preference number: 3 (lower is better)
Translates to: SSGDYRSSSPMPSKAKLPLRNSF*ETFSCR
Trigger: TCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGAG...CGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR TCA 72 bp GAGCATAAAGCAGGTTCAGGCCAACCCGGTTCTCCATaGCATCGTCATCATAGGCAGAGTCCCAATAACTCT +
Preference number: 3 (lower is better)
Translates to: EHKAGSGQPGSP*HRHHRQSPNNS
Trigger: AGAGTTATTGGGACTCTGCCTATGATGACGATGTCATGGAGAACCGGGTTGGCCTGAACCTGCTTTATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR GCA 72 bp TCCTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTaGCGGTGCTGTTCCTTGGTGACCAAGATCCACCCA +
Preference number: 3 (lower is better)
Translates to: SFLETFSCRDLS*RCCSLVTKIHP
Trigger: TGGGTGGATCTTGGTCACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR CCA 72 bp AAATTCCTCTGGGGTAGAGGGCAGACATCCAAGCAGTaGAGATTACAGATCCTCATCTCCAATGCCCTCGAA +
Preference number: 3 (lower is better)
Translates to: KFLWGRGQTSKQ*RLQILISNALE
Trigger: TTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCTTGGATGTCTGCCCTCTACCCCAGAGGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp GGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATTCAAAAATACTAAATGCTAATTaGGCATCGAGGGCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: GLVMVTHCSRSLLMRYSKILNAN*ASRASS
Trigger: AGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT...TTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp TCCAAGCAGTGGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTTTGCAGAGATTTGAGTaGCCGGTGCTGTTCCTTGGT +
Preference number: 3 (lower is better)
Translates to: SKQWRLQILISNALEGEILQRFE*PVLFLG
Trigger: ACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAA...AATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
3UTR-3UTR CAA 90 bp AGACTAAAGTATCCAATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCTGAAGTTAGCACGTaGACCAGAACTTTCTGCCCG +
Preference number: 3 (lower is better)
Translates to: RLKYPIKSSGRSSFAATASEVST*TRTFCP
Trigger: CGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAGA...GGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGATACTTTAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
3UTR CCA 72 bp CAGGAAACTGTTGAAAGTCTCGCTGCTCCCAAGCAATaGGTCTTGCCGAACTCACTCACTGTTTGCATAAAT +
Preference number: 3 (lower is better)
Translates to: QETVESLAAPKQ*VLPNSLTVCIN
Trigger: ATTTATGCAAACAGTGAGTGAGTTCGGCAAGACCCATTGCTTGGGAGCAGCGAGACTTTCAACAGTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427123.5
3UTR TCA 72 bp TTAGCACAATCTTATACTCTTGACTCCGAAGGCTGGTaGCAGACACATAAGGCAGCTCAAACTCTTGCAACT +
Preference number: 3 (lower is better)
Translates to: LAQSYTLDSEGW*QTHKAAQTLAT
Trigger: AGTTGCAAGAGTTTGAGCTGCCTTATGTGTCTGTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCGGGCTCCGGACTGTaGGGGCCGCAGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGPGSGL*GPQRLC
Trigger: GCAGAGCCGCTGCGGCCCTCACAGTCCGGAGCCCGG...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGCGGAGCTGCAGGCTaGGCTCACTGTTGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: RPEAAQREIWFLPKAGSHGGAAG*AHCCPR
Trigger: GCGCGGGCAACAGTGAGCTCAGCCTGCAGCTCCGCC...ATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp TGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCGGCGGAGCTGCAGGCTaGGCTCACTGTTGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: WPMAPRGQKRPRGRYGSSGGAAG*AHCCPR
Trigger: GCGCGGGCAACAGTGAGCTCAGCCTGCAGCTCCGCC...GGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CGCATGCGGGTGACCCGGAAGGAGCCTTCTCGGAGTTGCTGGCCAGGCAGGCGGATGGTACAGAGGAGGTaGCCCGCCAGCATCGCATGC +
Preference number: 4 (lower is better)
Translates to: RMRVTRKEPSRSCWPGRRMVQRR*PASIAC
Trigger: GCATGCGATGCTGGCGGGTCACCTCCTCTGTACCAT...CCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTCCTTCCGGGTCACCCGCATGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp GTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAACGCTCCCCCTCCGCTaGTCAGCGAGTCCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: VQPAQGTRKGRIRGPWPRTLPLR*SASPRS
Trigger: GCTGCGGGGACTCGCTGAGCAGCGGAGGGGGAGCGT...TCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000537606.5
CDS-3UTR CCA 90 bp GTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAACCCCGGCCCCGGCCTaGGCTGCTCGTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: VQPAQGTRKGRIRGPWPRTPAPA*AARAST
Trigger: AGTGGAAGCACGAGCAGCCCAGGCCGGGGCCGGGGT...TCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp ATCATGATAGCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCCCGGGCTCCGGACTGTaGGGGCCGCAGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: IMIAWGLVMVTHCSRSLLPGSGL*GPQRLC
Trigger: GCAGAGCCGCTGCGGCCCTCACAGTCCGGAGCCCGG...GAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGCTATCATGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp ATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGGGCGGAGCTGCAGGCTaGGCTCACTGTTGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: MAPRGQKRPRGRYGSSPRGGAAG*AHCCPR
Trigger: GCGCGGGCAACAGTGAGCTCAGCCTGCAGCTCCGCC...CCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp ATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGACGCTCCCCCTCCGCTaGTCAGCGAGTCCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: MAPRGQKRPRGRYGSSPRTLPLR*SASPRS
Trigger: GCTGCGGGGACTCGCTGAGCAGCGGAGGGGGAGCGT...CCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000537606.5
CDS-3UTR GCA 90 bp TGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCGCCGCTGTCCCCGCTaGGGGACTCGGTTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: WPMAPRGQKRPRGRYGSSRRCPR*GTRFRE
Trigger: TTCCCGAAACCGAGTCCCGCAGCGGGGACAGCGGCG...GGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp GCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTACGCCGCTGTCCCCGCTaGGGGACTCGGTTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: AAQREIWFLPKAGSHGPLRRCPR*GTRFRE
Trigger: TTCCCGAAACCGAGTCCCGCAGCGGGGACAGCGGCG...TAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCCTTCTCGGAGTTGCTaGCCAGGCAGGCGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPPSRSC*PGRRSC
Trigger: GCAGCTCCGCCTGCCTGGCCAGCAACTCCGAGAAGG...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATACCCCGGCCCCGGCCTaGGCTGCTCGTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYTPAPA*AARAST
Trigger: AGTGGAAGCACGAGCAGCCCAGGCCGGGGCCGGGGT...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp TGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCCCTCCGCCCCTAGCATaGGGGACACAGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: WLQEARSGPEGDMVPPQGPPPLA*GTQAQG
Trigger: GCCCTGTGCCTGTGTCCCCCATGCTAGGGGCGGAGG...GCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCACCTCCGCCCCTAGCATaGGGGACACAGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: PMAPRGQKRPRGRYGSSPPPPLA*GTQAQG
Trigger: GCCCTGTGCCTGTGTCCCCCATGCTAGGGGCGGAGG...TGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCCGGGTGGCATCAGGTaGCTCAAGCAGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPPGGIR*LKQWWG
Trigger: TCCCCACCACTGCTTGAGTCACCTGATGCCACCCGG...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCGGGAAGCAGGGGCAGTaGGAGGGAACCAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPGKQGQ*EGTRGR
Trigger: CCTACCTCTGGTTCCCTCTCACTGCCCCTGCTTCCC...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR GCA 90 bp CATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCAACGCTCCCCCTCCGCTaGTCAGCGAGTCCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: HRGPALKREGAILCAASPTLPLR*SASPRS
Trigger: GCTGCGGGGACTCGCTGAGCAGCGGAGGGGGAGCGT...TGGGCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000537606.5
CDS-3UTR GCA 90 bp GCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATACGCTCCCCCTCCGCTaGTCAGCGAGTCCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: AWGLVMVTHCSRSLLMRYTLPLR*SASPRS
Trigger: GCTGCGGGGACTCGCTGAGCAGCGGAGGGGGAGCGT...ATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR GCA 90 bp CGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCAGGGGAGCCTTCTCGGAGTTaGTGGCCAGGCAGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: RGPALKREGAILCAASPGEPSRS*WPGRRS
Trigger: GCTCCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTC...CCCTGGGCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGTCCCACCTGCTCGTaGAGCCCCAGGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PMAPRGQKRPRGRYGSSPSPTCS*SPRSWL
Trigger: CAGCCAGCTCCTGGGGCTGCACGAGCAGGTGGGACT...TGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440760.5
CDS-3UTR CCA 90 bp AAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTCCTTCTCGGAGTTGCTaGCCAGGCAGGCGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KRPRGRYGSSPRQAAMVPPSRSC*PGRRSC
Trigger: GCAGCTCCGCCTGCCTGGCCAGCAACTCCGAGAAGG...AGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp GGACACAGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACACCGGGCTCCGGACTGTaGGGGCCGCAGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GHRHRASFCKFLWGRGQTPGSGL*GPQRLC
Trigger: GCAGAGCCGCTGCGGCCCTCACAGTCCGGAGCCCGG...TGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCACCGGGTGGCATCAGGTaGCTCAAGCAGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PMAPRGQKRPRGRYGSSPPGGIR*LKQWWG
Trigger: TCCCCACCACTGCTTGAGTCACCTGATGCCACCCGG...TGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCAGGGGGGAAGCAGGGGCAGTaGGAGGGAACCAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: RGPALKREGAILCAASPGGKQGQ*EGTRGR
Trigger: CCTACCTCTGGTTCCCTCTCACTGCCCCTGCTTCCC...CCCTGGGCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR GCA 90 bp CATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCACGCCGCTGTCCCCGCTaGGGGACTCGGTTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: HRGPALKREGAILCAASPRRCPR*GTRFRE
Trigger: TTCCCGAAACCGAGTCCCGCAGCGGGGACAGCGGCG...TGGGCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp GTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGATTCCGAAGCTGCTCGTaGAGCCCCAGGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VQPAQGTRKGRIRGPWPRFRSCS*SPRSWL
Trigger: CAGCCAGCTCCTGGGGCTGCACGAGCAGCTTCGGAA...TCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000427123.5
CDS-3UTR CCA 90 bp CCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAGTGGGACGTCGGTTCTaGGACGCAATCGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PMAPRGQKRPRGRYGSSPVGRRF*DAIAWA
Trigger: TGCCCAGGCGATTGCGTCCCAGAACCGACGTCCCAC...TGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537606.5
CDS-3UTR CCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGCGATCCGATGTaGGAAGGCGGTGGGACGTCG +
Preference number: 4 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGPCDPM*EGGGTS
Trigger: CGACGTCCCACCGCCTTCCCACATCGGATCGCAGGG...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537606.5
CDS-3UTR TCA 90 bp AGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGGGCGGAGCTGCAGGCTaGGCTCACTGTTGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: REIWFLPKAGSHGPLDFVGGAAG*AHCCPR
Trigger: GCGCGGGCAACAGTGAGCTCAGCCTGCAGCTCCGCC...CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCAGCATCGCATGCGGGTaGCCCGGAAGGAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGSIACG*PGRSLL
Trigger: GAGAAGGCTCCTTCCGGGTCACCCGCATGCGATGCT...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCATGCTTGCTGGCTGTCTaGGCGTCTCAGAGTACCCCC +
Preference number: 4 (lower is better)
Translates to: PMAPRGQKRPRGRYGSSPCLLAV*ASQSTP
Trigger: GGGGGTACTCTGAGACGCTCAGACAGCCAGCAAGCA...TGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CGCATGCGGGTGACCCGGAAGGAGCCTTCTCGGAGTTGCTGGCCAGGCAGGCGGTTGACCAGAACTTTCTaGCCGTTGCTGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: RMRVTRKEPSRSCWPGRRLTRTF*PLLSST
Trigger: AGTGCTGCTCAGCAACGGGCAGAAAGTTCTGGTCAA...CCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTCCTTCCGGGTCACCCGCATGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp GCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGGCCTGGGCTGCTCGTaGTTCCACTGGGCAATGGTA +
Preference number: 4 (lower is better)
Translates to: AAQREIWFLPKAGSHGPLGLGCS*FHWAMV
Trigger: TACCATTGCCCAGTGGAAGCACGAGCAGCCCAGGCC...TAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp AGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGCCTGGGCTGCTCGTaGTTCCACTGGGCAATGGTA +
Preference number: 4 (lower is better)
Translates to: RPEAAQREIWFLPKAGSHGLGCS*FHWAMV
Trigger: TACCATTGCCCAGTGGAAGCACGAGCAGCCCAGGCC...ATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCTGGCACTGGCATCTGTaGTGGGACTGCCAATTCCCC +
Preference number: 4 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPWHWHL*WDCQFP
Trigger: GGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCA...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp AGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATAGGGGCAATCCTCTGTaGAGCCAGCCCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: RPEAAQREIWFLPKAGSHRGNPL*SQPRGQ
Trigger: TTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCCCT...ATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGGCTTCCACTGGGCAATaGTACAGAGGAGGTGACCCG +
Preference number: 4 (lower is better)
Translates to: ARSGPEGDMVPPQGRQPWASTGQ*YRGGDP
Trigger: CGGGTCACCTCCTCTGTACCATTGCCCAGTGGAAGC...CCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp ACCCGCCGGCGCAGCATCTTCCTGATACTGCCGCCAGATTTCTTCACCATCAGTCCTCCGCCCCTAGCATaGGGGACACAGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: TRRRSIFLILPPDFFTISPPPLA*GTQAQG
Trigger: GCCCTGTGCCTGTGTCCCCCATGCTAGGGGCGGAGG...ACTGATGGTGAAGAAATCTGGCGGCAGTATCAGGAAGATGCTGCGCCGGCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp AAAGCGCAAGTAGCCATAGTGCCGCAGCGTCTGGGCCAGTCTCAGGAACTCCTTCCTCCGCCCCTAGCATaGGGGACACAGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: KAQVAIVPQRLGQSQELLPPPLA*GTQAQG
Trigger: GCCCTGTGCCTGTGTCCCCCATGCTAGGGGCGGAGG...AAGGAGTTCCTGAGACTGGCCCAGACGCTGCGGCACTATGGCTACTTGCGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp TGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCCATCCCCTTGGCCTTTaGCCCATGGCTCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: WLQEARSGPEGDMVPPQGHPLGL*PMAPRG
Trigger: GCCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATG...GCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGATGTGGGAAGGCGGTaGGACGTCGGTTCTGGGACG +
Preference number: 4 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYDVGRR*DVGSGT
Trigger: CGTCCCAGAACCGACGTCCCACCGCCTTCCCACATC...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537606.5
CDS-3UTR TCA 90 bp CGCATGCGGGTGACCCGGAAGGAGCCTTCTCGGAGTTGCTGGCCAGGCAGGCGGAGGACATCCTCAGTCTaGTCTGAAGTTAGCACGTTG +
Preference number: 4 (lower is better)
Translates to: RMRVTRKEPSRSCWPGRRRTSSV*SEVSTL
Trigger: CAACGTGCTAACTTCAGATCAGACTGAGGATGTCCT...CCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTCCTTCCGGGTCACCCGCATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp CCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAGGTGCTGTTCCTTGGTaGCCAAGATCCACCCACGCT +
Preference number: 4 (lower is better)
Translates to: PMAPRGQKRPRGRYGSSPGAVPW*PRSTHA
Trigger: AGCGTGGGTGGATCTTGGTCACCAAGGAACAGCACC...TGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTGCTGTTCCTTGGTaGCCAAGATCCACCCACGCT +
Preference number: 4 (lower is better)
Translates to: RPEAAQREIWFLPKAGSHGAVPW*PRSTHA
Trigger: AGCGTGGGTGGATCTTGGTCACCAAGGAACAGCACC...ATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGAAATGGTACAGAGGAGGTaGCCCGCCAGCATCGCATGC +
Preference number: 4 (lower is better)
Translates to: QPAQGTRKGRIRGPWPREMVQRR*PASIAC
Trigger: GCATGCGATGCTGGCGGGTCACCTCCTCTGTACCAT...TTCTCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCGGCGCAGCATCTTCCTaGTACTGCCGCCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPGAASS*YCRQIS
Trigger: AGAAATCTGGCGGCAGTATCAGGAAGATGCTGCGCC...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTGGACCTTGCCTTGACTaGGGCACTTCACGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SGPEGDMVPPQGRQPWSLGPCLD*GTSRAQ
Trigger: CTGAGCTCGTGAAGTGCCTCAGTCAAGGCAAGGTCC...AAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR TCA 90 bp CCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAGGACCTTGCCTTGACTaGGGCACTTCACGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PMAPRGQKRPRGRYGSSPGPCLD*GTSRAQ
Trigger: CTGAGCTCGTGAAGTGCCTCAGTCAAGGCAAGGTCC...TGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR TCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCAGGGGACCTTGCCTTaGCTGAGGCACTTCACGAGC +
Preference number: 4 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGQGTLP*LRHFTS
Trigger: GCTCGTGAAGTGCCTCAGTCAAGGCAAGGTCCCCTG...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR GCA 90 bp AGAGGAGGTGACCCGCCAGCATCGCATGCGGGTGACCCGGAAGGAGCCTTCTCGCTGTGTCTCCTGTTGTaGCCGACGCAGGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: RGGDPPASHAGDPEGAFSLCLLL*PTQETV
Trigger: AACAGTTTCCTGCGTCGGGCACAACAGGAGACACAG...CGAGAAGGCTCCTTCCGGGTCACCCGCATGCGATGCTGGCGGGTCACCTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp GCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTATCCTCTGTGGGGACCTaGTGTGTCTCCTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: AAQREIWFLPKAGSHGPLSSVGT*CVSCCA
Trigger: GGCACAACAGGAGACACAGCAGGTCCCCACAGAGGA...TAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp TTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCGGCCTGGGCTGCTCGTaGTTCCACTGGGCAATGGTA +
Preference number: 4 (lower is better)
Translates to: LAHGSKRPEAAQREIWFLGLGCS*FHWAMV
Trigger: TACCATTGCCCAGTGGAAGCACGAGCAGCCCAGGCC...GAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp AGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGGGACTTCACTGCTTaGTGGCTGTCTGAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: RPEAAQREIWFLPKAGSHGDFTA*WLSERL
Trigger: GAGACGCTCAGACAGCCAGCAAGCAGTGAAGTCCCC...ATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp TGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCGGGGACTTCACTGCTTaGTGGCTGTCTGAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: WLQEARSGPEGDMVPPQGGDFTA*WLSERL
Trigger: GAGACGCTCAGACAGCCAGCAAGCAGTGAAGTCCCC...GCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGAAAGGGGCAATCCTCTGTaGAGCCAGCCCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: QPAQGTRKGRIRGPWPRERGNPL*SQPRGQ
Trigger: TTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCCCT...TTCTCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp TTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCAGGGGCAATCCTCTGTaGAGCCAGCCCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: LAHGSKRPEAAQREIWFLRGNPL*SQPRGQ
Trigger: TTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCCCT...GAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGCTTCCACTGGGCAATaGTACAGAGGAGGTGACCCG +
Preference number: 4 (lower is better)
Translates to: AAQREIWFLPKAGSHGPLASTGQ*YRGGDP
Trigger: CGGGTCACCTCCTCTGTACCATTGCCCAGTGGAAGC...TAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCGCTTCCACTGGGCAATaGTACAGAGGAGGTGACCCG +
Preference number: 4 (lower is better)
Translates to: KRPEAAQREIWFLPKAGSASTGQ*YRGGDP
Trigger: CGGGTCACCTCCTCTGTACCATTGCCCAGTGGAAGC...GCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GGACACAGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACAACCCCGGCCCCGGCCTaGGCTGCTCGTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: GHRHRASFCKFLWGRGQTTPAPA*AARAST
Trigger: AGTGGAAGCACGAGCAGCCCAGGCCGGGGCCGGGGT...TGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGACACTGGCATCTGTGCTaGGACTGCCAATTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: VQPAQGTRKGRIRGPWPRHWHLC*DCQFPA
Trigger: TGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTG...TCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCGGACATCACTGGCACTaGCATCTGTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: KRPEAAQREIWFLPKAGSGHHWH*HLCWDC
Trigger: GCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCC...GCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTTGCCGTGGACATCACTaGCACTGGCATCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGPEGDMVPPQGRQPWSLCRGHH*HWHLCW
Trigger: CCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCA...AAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGAAGCCCAGAGGGAGATATaGTTCCTCCCCAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QPAQGTRKGRIRGPWPREAQREI*FLPKAG
Trigger: GCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGC...TTCTCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGAACATCCCCTTGGCCTTTaGCCCATGGCTCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QPAQGTRKGRIRGPWPREHPLGL*PMAPRG
Trigger: GCCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATG...TTCTCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCAGGGCTTTCTGCCCGTTGCTaGGCAGCACTTCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: RGPALKREGAILCAASPGLSARC*AALPRT
Trigger: TGTCCTTGGAAGTGCTGCTCAGCAACGGGCAGAAAG...CCCTGGGCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTGACTCCGAAGGCTGGTaGCAGACACATAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KRPRGRYGSSPRQAAMVPDSEGW*QTHKAA
Trigger: AGCTGCCTTATGTGTCTGTCACCAGCCTTCGGAGTC...AGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCGACTCCGAAGGCTGGTaGCAGACACATAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KRPEAAQREIWFLPKAGSDSEGW*QTHKAA
Trigger: AGCTGCCTTATGTGTCTGTCACCAGCCTTCGGAGTC...GCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCGGTGCTGTTCCTTGGTaGCCAAGATCCACCCACGCT +
Preference number: 4 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGGAVPW*PRSTHA
Trigger: AGCGTGGGTGGATCTTGGTCACCAAGGAACAGCACC...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CACAGGACAGTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGGCGGAGCTGCAGGCTaGGCTCACTGTTGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: HRTVLFWEVSHTGIKAQVGGAAG*AHCCPR
Trigger: GCGCGGGCAACAGTGAGCTCAGCCTGCAGCTCCGCC...TACTTGCGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp TTGCTGAGCAGCACTTCCAAGGACACTTCCTCTGTGGGGACCTGCTGTGTCTCCAGCATCGCATGCGGGTaGCCCGGAAGGAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLSSTSKDTSSVGTCCVSSIACG*PGRSLL
Trigger: GAGAAGGCTCCTTCCGGGTCACCCGCATGCGATGCT...GGAGACACAGCAGGTCCCCACAGAGGAAGTGTCCTTGGAAGTGCTGCTCAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR TCA 90 bp AATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTTGCTTGCTGGCTGTCTaGGCGTCTCAGAGTACCCCC +
Preference number: 4 (lower is better)
Translates to: NPLCSQPRGQGKVGYEAPCLLAV*ASQSTP
Trigger: GGGGGTACTCTGAGACGCTCAGACAGCCAGCAAGCA...AGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTATCGAGGGCCAGCTCTaGAAAGAGAAGGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: KRPRGRYGSSPRQAAMVPIEGQL*KEKGQS
Trigger: GGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGAT...AGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAATCGAGGGCCAGCTCTaGAAAGAGAAGGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: PMAPRGQKRPRGRYGSSPIEGQL*KEKGQS
Trigger: GGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGAT...TGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp TGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCATCGAGGGCCAGCTCTaGAAAGAGAAGGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: WLQEARSGPEGDMVPPQGIEGQL*KEKGQS
Trigger: GGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGAT...GCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCAGGGGACCTTGCCTTaGCTGAGGCACTTCACGAGC +
Preference number: 4 (lower is better)
Translates to: WHRGPALKREGAILCAASQGTLP*LRHFTS
Trigger: GCTCGTGAAGTGCCTCAGTCAAGGCAAGGTCCCCTG...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR TCA 90 bp GCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGGGTAAAGGGAGACACTaGTGTCCACGTGTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: ARSGPEGDMVPPQGRQPWGKGRH*CPRVGK
Trigger: CTTCCCTACACGTGGACATCAGTGTCTCCCTTTACC...CCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440760.5
CDS-3UTR GCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATTCCTCTGTGGGGACCTaGTGTGTCTCCTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYSSVGT*CVSCCA
Trigger: GGCACAACAGGAGACACAGCAGGTCCCCACAGAGGA...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGAATCCTCTGTGGGGACCTaGTGTGTCTCCTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: QPAQGTRKGRIRGPWPRESSVGT*CVSCCA
Trigger: GGCACAACAGGAGACACAGCAGGTCCCCACAGAGGA...TTCTCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp ACTGTTGAAAGTCTCGCTGCTCCCAAGCAATGGGTCTTGCCGAACCTGTGGCAGGAGCCTTCTCGGAGTTaGTGGCCAGGCAGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: TVESLAAPKQWVLPNLWQEPSRS*WPGRRS
Trigger: GCTCCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTC...CTGCCACAGGTTCGGCAAGACCCATTGCTTGGGAGCAGCGAGACTTTCAACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440760.5
CDS-3UTR GCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCGGGGACTTCACTGCTTaGTGGCTGTCTGAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGGDFTA*WLSERL
Trigger: GAGACGCTCAGACAGCCAGCAAGCAGTGAAGTCCCC...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp ATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGGGGGACTTCACTGCTTaGTGGCTGTCTGAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: MAPRGQKRPRGRYGSSPRGDFTA*WLSERL
Trigger: GAGACGCTCAGACAGCCAGCAAGCAGTGAAGTCCCC...CCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp AGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTCATCTGTGCTGGGACTaGCAATTCCCCGCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SGPEGDMVPPQGRQPWSLHLCWD*QFPASS
Trigger: TGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATG...AAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp AGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATCCTCGAAGGCGAAATTaGCGTGGACATCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: RPEAAQREIWFLPKAGSHPRRRN*RGHHWH
Trigger: GTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGG...ATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp GCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTACCAAACACAGACCTCTaGCCATCCCCTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: AAQREIWFLPKAGSHGPLPNTDL*PSPWPL
Trigger: CAAAGGCCAAGGGGATGGGCAGAGGTCTGTGTTTGG...TAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp AAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTCCAAACACAGACCTCTaGCCATCCCCTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: KRPRGRYGSSPRQAAMVPPNTDL*PSPWPL
Trigger: CAAAGGCCAAGGGGATGGGCAGAGGTCTGTGTTTGG...AGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CACCACCACAGGACAGTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGGGTGCTAGTCCCACCTaGTCGTGCAGCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HHHRTVLFWEVSHTGIKAGASPT*SCSPRS
Trigger: GCTCCTGGGGCTGCACGAGCAGGTGGGACTAGCACC...CGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCTGTGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440760.5
CDS-3UTR CCA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCAGGACAGTCCTTTTCTaGGAAGTCAGCCACACAGGC +
Preference number: 4 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPRTVLF*EVSHTG
Trigger: GCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCT...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGAGGACAGTCCTTTTCTaGGAAGTCAGCCACACAGGC +
Preference number: 4 (lower is better)
Translates to: ARSGPEGDMVPPQGRQPWRTVLF*EVSHTG
Trigger: GCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCT...CCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTATGCTCGTGCTTCCACTaGGCAATGGTACAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AAQREIWFLPKAGSHGPLCSCFH*AMVQRR
Trigger: CCTCCTCTGTACCATTGCCCAGTGGAAGCACGAGCA...TAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp TGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCTGCTCGTGCTTCCACTaGGCAATGGTACAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WLQEARSGPEGDMVPPQGCSCFH*AMVQRR
Trigger: CCTCCTCTGTACCATTGCCCAGTGGAAGCACGAGCA...GCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGACCCCGGCCCCGGCCTaGGCTGCTCGTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKTPAPA*AARAST
Trigger: AGTGGAAGCACGAGCAGCCCAGGCCGGGGCCGGGGT...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCGACTTCACTGCTTGCTaGCTGTCTGAGCGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPDFTAC*LSERLR
Trigger: TCTGAGACGCTCAGACAGCCAGCAAGCAGTGAAGTC...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp ATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGGGACATCACTGGCACTaGCATCTGTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: MAPRGQKRPRGRYGSSPRGHHWH*HLCWDC
Trigger: GCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCC...CCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp TTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCGGACATCACTGGCACTaGCATCTGTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: LAHGSKRPEAAQREIWFLGHHWH*HLCWDC
Trigger: GCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCC...GAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGCCCAGAGGGAGATATaGTTCCTCCCCAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NPLCSQPRGQGKVGYEAPAQREI*FLPKAG
Trigger: GCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGC...AGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTCATCCCCTTGGCCTTTaGCCCATGGCTCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: NPLCSQPRGQGKVGYEAPHPLGL*PMAPRG
Trigger: GCCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATG...AGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp TGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCGACGCAGGAAACTGTTaGAAGTCTCGCTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: WPMAPRGQKRPRGRYGSSDAGNC*KSRCSQ
Trigger: TTGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTC...GGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCTTTCTGCCCGTTGCTaGGCAGCACTTCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGLSARC*AALPRT
Trigger: TGTCCTTGGAAGTGCTGCTCAGCAACGGGCAGAAAG...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGAAGACTCCGAAGGCTGGTaGCAGACACATAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QPAQGTRKGRIRGPWPREDSEGW*QTHKAA
Trigger: AGCTGCCTTATGTGTCTGTCACCAGCCTTCGGAGTC...TTCTCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp TGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCCAACCCGGTTCTCCATaGCATCGTCATCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: WLQEARSGPEGDMVPPQGQPGSP*HRHHRQ
Trigger: CTGCCTATGATGACGATGTCATGGAGAACCGGGTTG...GCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000537606.5
CDS-3UTR TCA 90 bp GTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGACAACCCGGTTCTCCATaGCATCGTCATCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: VQPAQGTRKGRIRGPWPRQPGSP*HRHHRQ
Trigger: CTGCCTATGATGACGATGTCATGGAGAACCGGGTTG...TCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000537606.5
CDS-3UTR TCA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCGGTGCTGTTCCTTGGTaGCCAAGATCCACCCACGCT +
Preference number: 4 (lower is better)
Translates to: WHRGPALKREGAILCAASGAVPW*PRSTHA
Trigger: AGCGTGGGTGGATCTTGGTCACCAAGGAACAGCACC...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGAGCATCGCATGCGGGTaGCCCGGAAGGAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: REIWFLPKAGSHGPLDFVSIACG*PGRSLL
Trigger: GAGAAGGCTCCTTCCGGGTCACCCGCATGCGATGCT...CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp GTTGCTGAGCAGCACTTCCAAGGACACTTCCTCTGTGGGGACCTGCTGTGTCTCATGGTACAGAGGAGGTaGCCCGCCAGCATCGCATGC +
Preference number: 4 (lower is better)
Translates to: VAEQHFQGHFLCGDLLCLMVQRR*PASIAC
Trigger: GCATGCGATGCTGGCGGGTCACCTCCTCTGTACCAT...GAGACACAGCAGGTCCCCACAGAGGAAGTGTCCTTGGAAGTGCTGCTCAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR TCA 90 bp ATCATGATAGCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCATGGTACAGAGGAGGTaGCCCGCCAGCATCGCATGC +
Preference number: 4 (lower is better)
Translates to: IMIAWGLVMVTHCSRSLLMVQRR*PASIAC
Trigger: GCATGCGATGCTGGCGGGTCACCTCCTCTGTACCAT...GAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGCTATCATGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp AAAGCGCAAGTAGCCATAGTGCCGCAGCGTCTGGGCCAGTCTCAGGAACTCCTTTGCTTGCTGGCTGTCTaGGCGTCTCAGAGTACCCCC +
Preference number: 4 (lower is better)
Translates to: KAQVAIVPQRLGQSQELLCLLAV*ASQSTP
Trigger: GGGGGTACTCTGAGACGCTCAGACAGCCAGCAAGCA...AAGGAGTTCCTGAGACTGGCCCAGACGCTGCGGCACTATGGCTACTTGCGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGCGCCGCTGTCCCCGCTaGGGGACTCGGTTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKRRCPR*GTRFRE
Trigger: TTCCCGAAACCGAGTCCCGCAGCGGGGACAGCGGCG...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp TGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCTGGAAGATCCAGCTTTaGAGCTACAGCCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: WPMAPRGQKRPRGRYGSSWKIQL*SYSLQD
Trigger: GTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCA...GGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp AATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTTGGCACTGGCATCTGTaGTGGGACTGCCAATTCCCC +
Preference number: 4 (lower is better)
Translates to: NPLCSQPRGQGKVGYEAPWHWHL*WDCQFP
Trigger: GGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCA...AGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGAACCTCGAAGGCGAAATTaGCGTGGACATCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: QPAQGTRKGRIRGPWPREPRRRN*RGHHWH
Trigger: GTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGG...TTCTCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCGCTGCTCCCAAGCAATaGGTCTTGCCGAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGAAPKQ*VLPNSL
Trigger: CAAGCTGTTCGGCAAGACCCATTGCTTGGGAGCAGC...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR CCA 90 bp AAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCAGGACAGTCCTTTTCTaGGAAGTCAGCCACACAGGC +
Preference number: 4 (lower is better)
Translates to: KRPEAAQREIWFLPKAGSRTVLF*EVSHTG
Trigger: GCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCT...GCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGACTCATCATGATAGCCTaGGGGCTAGTGATGGTGACC +
Preference number: 4 (lower is better)
Translates to: VQPAQGTRKGRIRGPWPRLIMIA*GLVMVT
Trigger: GGTCACCATCACTAGCCCCCAGGCTATCATGATGAG...TCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp TGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCCTCATCATGATAGCCTaGGGGCTAGTGATGGTGACC +
Preference number: 4 (lower is better)
Translates to: WLQEARSGPEGDMVPPQGLIMIA*GLVMVT
Trigger: GGTCACCATCACTAGCCCCCAGGCTATCATGATGAG...GCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCTCATCATGATAGCCTaGGGGCTAGTGATGGTGACC +
Preference number: 4 (lower is better)
Translates to: KRPEAAQREIWFLPKAGSLIMIA*GLVMVT
Trigger: GGTCACCATCACTAGCCCCCAGGCTATCATGATGAG...GCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTGACTTCACTGCTTGCTaGCTGTCTGAGCGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: KRPRGRYGSSPRQAAMVPDFTAC*LSERLR
Trigger: TCTGAGACGCTCAGACAGCCAGCAAGCAGTGAAGTC...AGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp TCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGAAGGCGAAATTGCCGTaGACATCACTGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: SSVQPAQGTRKGRIRGPWKAKLP*TSLALA
Trigger: TGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTT...CCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCTTTCTGCCCGTTGCTaGGCAGCACTTCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: WHRGPALKREGAILCAASLSARC*AALPRT
Trigger: TGTCCTTGGAAGTGCTGCTCAGCAACGGGCAGAAAG...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCAGGACATCCTCAGTCTaGTCTGAAGTTAGCACGTTG +
Preference number: 4 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPRTSSV*SEVSTL
Trigger: CAACGTGCTAACTTCAGATCAGACTGAGGATGTCCT...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AAAGCGCAAGTAGCCATAGTGCCGCAGCGTCTGGGCCAGTCTCAGGAACTCCTTGGTGCTGTTCCTTGGTaGCCAAGATCCACCCACGCT +
Preference number: 4 (lower is better)
Translates to: KAQVAIVPQRLGQSQELLGAVPW*PRSTHA
Trigger: AGCGTGGGTGGATCTTGGTCACCAAGGAACAGCACC...AAGGAGTTCCTGAGACTGGCCCAGACGCTGCGGCACTATGGCTACTTGCGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp CCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCATCTCTTGCAGAGATTTaGGTTGCCGGTGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: PMAPRGQKRPRGRYGSSPSLAEI*VAGAVP
Trigger: AGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGA...TGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCTCTCTTGCAGAGATTTaGGTTGCCGGTGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KRPEAAQREIWFLPKAGSSLAEI*VAGAVP
Trigger: AGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGA...GCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp TCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGGCCGGTCCTTGCTCATaGGGTATTCAAAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SSVQPAQGTRKGRIRGPWAGPCS*GIQKPV
Trigger: AACTGGCTTTTGAATACCTCATGAGCAAGGACCGGC...CCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCGCAGCATCTTCCTaGTACTGCCGCCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: NPLCSQPRGQGKVGYEAPGAASS*YCRQIS
Trigger: AGAAATCTGGCGGCAGTATCAGGAAGATGCTGCGCC...AGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTTGCTTGCTGGCTGTCTaGGCGTCTCAGAGTACCCCC +
Preference number: 4 (lower is better)
Translates to: QREIWFLPKAGSHGPLDFCLLAV*ASQSTP
Trigger: GGGGGTACTCTGAGACGCTCAGACAGCCAGCAAGCA...AAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AGGCTGAGTTTAATGATGGGGAACTGGGCCAGACCAAACACAGACCTCTGCCCACCGGGTGGCATCAGGTaGCTCAAGCAGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RLSLMMGNWARPNTDLCPPGGIR*LKQWWG
Trigger: TCCCCACCACTGCTTGAGTCACCTGATGCCACCCGG...TGGGCAGAGGTCTGTGTTTGGTCTGGCCCAGTTCCCCATCATTAAACTCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATTCGGGAATGGAAAAGTaGATGTTCCCTACGGCACGG +
Preference number: 4 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYSGMEK*MFPTAR
Trigger: CCGTGCCGTAGGGAACATGCACTTTTCCATTCCCGA...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp TGTTCCTTGGTGACCAAGATCCACCCACGCTCAATATCTGATACCGTCTCTTCCCGCCGCTGTCCCCGCTaGGGGACTCGGTTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: CSLVTKIHPRSISDTVSSRRCPR*GTRFRE
Trigger: TTCCCGAAACCGAGTCCCGCAGCGGGGACAGCGGCG...GGAAGAGACGGTATCAGATATTGAGCGTGGGTGGATCTTGGTCACCAAGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453453.1
CDS-3UTR GCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATTGGAAGATCCAGCTTTaGAGCTACAGCCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYWKIQL*SYSLQD
Trigger: GTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCA...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp GTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGCCATAGTGGAGCCTTCTCGGAGTTaGTGGCCAGGCAGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: VLFWEVSHTGIKAQVAIVEPSRS*WPGRRS
Trigger: GCTCCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTC...CACTATGGCTACTTGCGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp TCCAATGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGGCCTGGGCTGCTCGTaGTTCCACTGGGCAATGGTA +
Preference number: 4 (lower is better)
Translates to: SNALEGEIAVDITGTGICGLGCS*FHWAMV
Trigger: TACCATTGCCCAGTGGAAGCACGAGCAGCCCAGGCC...ACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp CGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGGACTGCCATCTGTGCTGGGACTaGCAATTCCCCGCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: RRRNCRGHHWHWHLCWDCHLCWD*QFPASS
Trigger: TGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATG...GCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp GTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGATCCTCATCTCCAATaGCCTCGAAGGCGAAATTGC +
Preference number: 4 (lower is better)
Translates to: VQPAQGTRKGRIRGPWPRDPHLQ*PRRRNC
Trigger: GCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATC...TCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CACCACCACAGGACAGTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGAGGGGCAATCCTCTGTaGAGCCAGCCCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: HHHRTVLFWEVSHTGIKARGNPL*SQPRGQ
Trigger: TTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCCCT...CGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCTGTGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp TGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCCATAAATTCTTCACCTaGCCCACCCTTGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: WLQEARSGPEGDMVPPQGHKFFT*PTLGCH
Trigger: ATGGCAGCCAAGGGTGGGGCAGGTGAAGAATTTATG...GCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427123.5
CDS-3UTR CCA 90 bp TTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCTCATCATGATAGCCTaGGGGCTAGTGATGGTGACC +
Preference number: 4 (lower is better)
Translates to: LAHGSKRPEAAQREIWFLLIMIA*GLVMVT
Trigger: GGTCACCATCACTAGCCCCCAGGCTATCATGATGAG...GAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AAAGCGCAAGTAGCCATAGTGCCGCAGCGTCTGGGCCAGTCTCAGGAACTCCTTCACTGGCATCTGTGCTaGGACTGCCAATTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: KAQVAIVPQRLGQSQELLHWHLC*DCQFPA
Trigger: TGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTG...AAGGAGTTCCTGAGACTGGCCCAGACGCTGCGGCACTATGGCTACTTGCGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp GGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGCCATAGTGCCGCAGCGTCTTGCCGTGGACATCACTaGCACTGGCATCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GSQPHRHQSASSHSAAASCRGHH*HWHLCW
Trigger: CCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCA...AGACGCTGCGGCACTATGGCTACTTGCGCTTTGATGCCTGTGTGGCTGACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp CTGTGCTGGGACTGCCAATTCCCCGCAAGCTCACGGCACTCAGCTTACTTGAGATGCCGTGGACATCACTaGCACTGGCATCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LCWDCQFPASSRHSAYLRCRGHH*HWHLCW
Trigger: CCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCA...TCTCAAGTAAGCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATAAGGCGAAATTGCCGTaGACATCACTGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYKAKLP*TSLALA
Trigger: TGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTT...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCTTCTGTAAATTCCTCTaGGGTAGAGGGCAGACATCC +
Preference number: 4 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPFCKFL*GRGQTS
Trigger: GGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAA...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CACCACCACAGGACAGTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGGCCCAGAGGGAGATATaGTTCCTCCCCAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: HHHRTVLFWEVSHTGIKAAQREI*FLPKAG
Trigger: GCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGC...CGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCTGTGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp AGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCATCCCCTTGGCCTTTaGCCCATGGCTCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: REIWFLPKAGSHGPLDFVHPLGL*PMAPRG
Trigger: GCCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATG...CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp TGCAAAATACTAAATGCTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGCCGGGCTCCGGACTGTaGGGGCCGCAGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CKILNANLASRASSEKRRPGSGL*GPQRLC
Trigger: GCAGAGCCGCTGCGGCCCTCACAGTCCGGAGCCCGG...CCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTATTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AAAGCGCAAGTAGCCATAGTGCCGCAGCGTCTGGGCCAGTCTCAGGAACTCCTTCTTTCTGCCCGTTGCTaGGCAGCACTTCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: KAQVAIVPQRLGQSQELLLSARC*AALPRT
Trigger: TGTCCTTGGAAGTGCTGCTCAGCAACGGGCAGAAAG...AAGGAGTTCCTGAGACTGGCCCAGACGCTGCGGCACTATGGCTACTTGCGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp CAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCAGGACATCCTCAGTCTaGTCTGAAGTTAGCACGTTG +
Preference number: 4 (lower is better)
Translates to: QKRPRGRYGSSPRQAAMVRTSSV*SEVSTL
Trigger: CAACGTGCTAACTTCAGATCAGACTGAGGATGTCCT...GACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCTCTCTTGCAGAGATTTaGGTTGCCGGTGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGSLAEI*VAGAVP
Trigger: AGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGA...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp TTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCTCTCTTGCAGAGATTTaGGTTGCCGGTGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LAHGSKRPEAAQREIWFLSLAEI*VAGAVP
Trigger: AGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGA...GAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGAAGCCGGTCCTTGCTCATaGGGTATTCAAAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: QPAQGTRKGRIRGPWPREAGPCS*GIQKPV
Trigger: AACTGGCTTTTGAATACCTCATGAGCAAGGACCGGC...TTCTCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGGGCGCAGCATCTTCCTaGTACTGCCGCCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: PHLQCPRRRNCRGHHWHWGAASS*YCRQIS
Trigger: AGAAATCTGGCGGCAGTATCAGGAAGATGCTGCGCC...CCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGCCGGGTGGCATCAGGTaGCTCAAGCAGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKPGGIR*LKQWWG
Trigger: TCCCCACCACTGCTTGAGTCACCTGATGCCACCCGG...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp AGCAGTGGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGTTCCGAAGCTGCTCGTaGAGCCCCAGGAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSGDYRSSSPMPSKAKLPFRSCS*SPRSWL
Trigger: CAGCCAGCTCCTGGGGCTGCACGAGCAGCTTCGGAA...CGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427123.5
CDS-3UTR GCA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCTGTGTCTCCTGTTGTaGCCGACGCAGGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: WHRGPALKREGAILCAASLCLLL*PTQETV
Trigger: AACAGTTTCCTGCGTCGGGCACAACAGGAGACACAG...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATTTGACCAGAACTTTCTaGCCGTTGCTGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYLTRTF*PLLSST
Trigger: AGTGCTGCTCAGCAACGGGCAGAAAGTTCTGGTCAA...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp TTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCTGCAGAGATTTGAGTTaGCGGTGCTGTTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LAHGSKRPEAAQREIWFLCRDLS*RCCSLV
Trigger: CACCAAGGAACAGCACCGGCAACTCAAATCTCTGCA...GAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGAATGCAGAGATTTGAGTTaGCGGTGCTGTTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QPAQGTRKGRIRGPWPRECRDLS*RCCSLV
Trigger: CACCAAGGAACAGCACCGGCAACTCAAATCTCTGCA...TTCTCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp GCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCATCAACCATGGACTaGAAGCAGATGCTCATCATG +
Preference number: 4 (lower is better)
Translates to: ARSGPEGDMVPPQGRQPWSSTMD*KQMLIM
Trigger: CATGATGAGCATCTGCTTGCAGTCCATGGTTGATGA...CCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp GAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGGGGACTTCACTGCTTaGTGGCTGTCTGAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: EGDMVPPQGRQPWSLRLCGDFTA*WLSERL
Trigger: GAGACGCTCAGACAGCCAGCAAGCAGTGAAGTCCCC...ACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp GAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTTGGCACTGGCATCTGTaGTGGGACTGCCAATTCCCC +
Preference number: 4 (lower is better)
Translates to: EGDMVPPQGRQPWSLRLCWHWHL*WDCQFP
Trigger: GGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCA...ACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CTGTGCTGGGACTGCCAATTCCCCGCAAGCTCACGGCACTCAGCTTACTTGAGACCTCGAAGGCGAAATTaGCGTGGACATCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: LCWDCQFPASSRHSAYLRPRRRN*RGHHWH
Trigger: GTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGG...TCTCAAGTAAGCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp ATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGGATCCTCATCTCCAATaGCCTCGAAGGCGAAATTGC +
Preference number: 4 (lower is better)
Translates to: MAPRGQKRPRGRYGSSPRDPHLQ*PRRRNC
Trigger: GCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATC...CCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGAAGATCCTCATCTCCAATaGCCTCGAAGGCGAAATTGC +
Preference number: 4 (lower is better)
Translates to: QPAQGTRKGRIRGPWPREDPHLQ*PRRRNC
Trigger: GCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATC...TTCTCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp ACCCGCCGGCGCAGCATCTTCCTGATACTGCCGCCAGATTTCTTCACCATCAGTCCAAACACAGACCTCTaGCCATCCCCTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: TRRRSIFLILPPDFFTISPNTDL*PSPWPL
Trigger: CAAAGGCCAAGGGGATGGGCAGAGGTCTGTGTTTGG...ACTGATGGTGAAGAAATCTGGCGGCAGTATCAGGAAGATGCTGCGCCGGCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp AGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCCATTTTGGGAGCCCTaGGATCCGATGTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: REIWFLPKAGSHGPLDFVPFWEP*DPMWEG
Trigger: GCCTTCCCACATCGGATCGCAGGGCTCCCAAAATGG...CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537606.5
CDS-3UTR CCA 90 bp CAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGCTTCCACTGGGCAATaGTACAGAGGAGGTGACCCG +
Preference number: 4 (lower is better)
Translates to: QREIWFLPKAGSHGPLDFASTGQ*YRGGDP
Trigger: CGGGTCACCTCCTCTGTACCATTGCCCAGTGGAAGC...AAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCACTGGCATCTGTGCTaGGACTGCCAATTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: REIWFLPKAGSHGPLDFVHWHLC*DCQFPA
Trigger: TGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTG...CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGGACATCACTGGCACTaGCATCTGTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: EGDMVPPQGRQPWSLRLCGHHWH*HLCWDC
Trigger: GCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCC...ACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp TGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGAAGGCGAAATTGCCGTaGACATCACTGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: CPRRRNCRGHHWHWHLCWKAKLP*TSLALA
Trigger: TGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTT...CCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp GGACACAGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACAGCCCAGAGGGAGATATaGTTCCTCCCCAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GHRHRASFCKFLWGRGQTAQREI*FLPKAG
Trigger: GCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGC...TGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCAGGGTTAATGATGGGGAACTaGGCCAGACCAAACACAGAC +
Preference number: 4 (lower is better)
Translates to: RGPALKREGAILCAASPGLMMGN*ARPNTD
Trigger: GTCTGTGTTTGGTCTGGCCCAGTTCCCCATCATTAA...CCCTGGGCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCATGCTGAATTGGCAATaGCAGGCAATTTGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPMLNWQ*QAIWPY
Trigger: GTAAGGCCAAATTGCCTGCCATTGCCAATTCAGCAT...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR CCA 90 bp ACTGTTGAAAGTCTCGCTGCTCCCAAGCAATGGGTCTTGCCGAACCTGTGGCAGGCTGCTCCCAAGCAATaGGTCTTGCCGAACCTGTGG +
Preference number: 4 (lower is better)
Translates to: TVESLAAPKQWVLPNLWQAAPKQ*VLPNLW
Trigger: CCACAGGTTCGGCAAGACCCATTGCTTGGGAGCAGC...CTGCCACAGGTTCGGCAAGACCCATTGCTTGGGAGCAGCGAGACTTTCAACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440760.5
3UTR CAA 72 bp TGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTaGCTCATGAGGTATTCAAAAGCCAGTTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: WGLVMVTHCSRS*LMRYSKASSRR
Trigger: GCGCCTGGAACTGGCTTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp AATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTCTGAAGTTAGCACGTTaGCCAGAACTTTCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: NPLCSQPRGQGKVGYEAPLKLAR*PELSAR
Trigger: ACGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAG...AGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCACAATCTTATACTCTTaGCTCCGAAGGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: KRPEAAQREIWFLPKAGSTILYS*LRRLVT
Trigger: TGTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGT...GCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCACGCTCAATATCTaGTACCGTCTGAGCATAAAG +
Preference number: 4 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGPTLNI*YRLSIK
Trigger: CTTTATGCTCAGACGGTATCAGATATTGAGCGTGGG...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000537606.5
CDS-3UTR TCA 90 bp CTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAATGGTACAGAGGAGGTaGCCCGCCAGCATCGCATGC +
Preference number: 4 (lower is better)
Translates to: LIWHRGPALKREGAILCAMVQRR*PASIAC
Trigger: GCATGCGATGCTGGCGGGTCACCTCCTCTGTACCAT...TGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCAGCCGGTCCTTGCTCATaGGGTATTCAAAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: HRGPALKREGAILCAASPAGPCS*GIQKPV
Trigger: AACTGGCTTTTGAATACCTCATGAGCAAGGACCGGC...TGGGCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CACCACCACAGGACAGTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGGGCGCAGCATCTTCCTaGTACTGCCGCCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: HHHRTVLFWEVSHTGIKAGAASS*YCRQIS
Trigger: AGAAATCTGGCGGCAGTATCAGGAAGATGCTGCGCC...CGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCTGTGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp CTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTTGGTGACCCGGGTGGCATCAGGTaGCTCAAGCAGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LGDFLLQRFELPVLFLGDPGGIR*LKQWWG
Trigger: TCCCCACCACTGCTTGAGTCACCTGATGCCACCCGG...GTCACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp GAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTATCGAGGGCCAGCTCTaGAAAGAGAAGGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: EGDMVPPQGRQPWSLRLCIEGQL*KEKGQS
Trigger: GGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGAT...ACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp AAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTCTTGCCGAACAGCTTaGATGTACTTCTCTAACTGC +
Preference number: 4 (lower is better)
Translates to: KRPRGRYGSSPRQAAMVPSCRTA*MYFSNC
Trigger: GCAGTTAGAGAAGTACATGCAAGCTGTTCGGCAAGA...AGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR GCA 90 bp TTGCTGAGCAGCACTTCCAAGGACACTTCCTCTGTGGGGACCTGCTGTGTCTCCCTGTGTCTCCTGTTGTaGCCGACGCAGGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: LLSSTSKDTSSVGTCCVSLCLLL*PTQETV
Trigger: AACAGTTTCCTGCGTCGGGCACAACAGGAGACACAG...GGAGACACAGCAGGTCCCCACAGAGGAAGTGTCCTTGGAAGTGCTGCTCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR GCA 90 bp TTTGGCCTTACCCTTAGCATAGTAGTCCATGCTGTGATGGGGGAAGCAGGGGCATCCTCTGTGGGGACCTaGTGTGTCTCCTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: FGLTLSIVVHAVMGEAGASSVGT*CVSCCA
Trigger: GGCACAACAGGAGACACAGCAGGTCCCCACAGAGGA...TGCCCCTGCTTCCCCCATCACAGCATGGACTACTATGCTAAGGGTAAGGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR GCA 90 bp AAAGCGCAAGTAGCCATAGTGCCGCAGCGTCTGGGCCAGTCTCAGGAACTCCTTTGGAAGATCCAGCTTTaGAGCTACAGCCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KAQVAIVPQRLGQSQELLWKIQL*SYSLQD
Trigger: GTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCA...AAGGAGTTCCTGAGACTGGCCCAGACGCTGCGGCACTATGGCTACTTGCGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCTGCAGAGATTTGAGTTaGCGGTGCTGTTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: WHRGPALKREGAILCAASCRDLS*RCCSLV
Trigger: CACCAAGGAACAGCACCGGCAACTCAAATCTCTGCA...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp TCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGTTGGAGACTTTCTCTTaGAGAGATTTGAGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: SSVQPAQGTRKGRIRGPWLETFS*RDLSCR
Trigger: CCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAA...CCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCTCATCAACCATGGACTaGAAGCAGATGCTCATCATG +
Preference number: 4 (lower is better)
Translates to: QKRPRGRYGSSPRQAAMVSSTMD*KQMLIM
Trigger: CATGATGAGCATCTGCTTGCAGTCCATGGTTGATGA...GACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp AGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCATCTGTGCTGGGACTaGCAATTCCCCGCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: REIWFLPKAGSHGPLDFVHLCWD*QFPASS
Trigger: TGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATG...CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp TTTGGCCTTACCCTTAGCATAGTAGTCCATGCTGTGATGGGGGAAGCAGGGGCATGGCACTGGCATCTGTaGTGGGACTGCCAATTCCCC +
Preference number: 4 (lower is better)
Translates to: FGLTLSIVVHAVMGEAGAWHWHL*WDCQFP
Trigger: GGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCA...TGCCCCTGCTTCCCCCATCACAGCATGGACTACTATGCTAAGGGTAAGGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR GCA 90 bp ACGTTGACCAGAACTTTCTGCCCGTTGCTGAGCAGCACTTCCAAGGACACTTCCTGGCACTGGCATCTGTaGTGGGACTGCCAATTCCCC +
Preference number: 4 (lower is better)
Translates to: TLTRTFCPLLSSTSKDTSWHWHL*WDCQFP
Trigger: GGGGAATTGGCAGTCCCAGCACAGATGCCAGTGCCA...GGAAGTGTCCTTGGAAGTGCTGCTCAGCAACGGGCAGAAAGTTCTGGTCAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR CCA 90 bp TGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCACTCGGTTTCGGGAATaGAAAAGTGCATGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: WPMAPRGQKRPRGRYGSSTRFRE*KSACSL
Trigger: TAGGGAACATGCACTTTTCCATTCCCGAAACCGAGT...GGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp TCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGACTCGGTTTCGGGAATaGAAAAGTGCATGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: SSVQPAQGTRKGRIRGPWTRFRE*KSACSL
Trigger: TAGGGAACATGCACTTTTCCATTCCCGAAACCGAGT...CCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGGCTGCTCCCAAGCAATaGGTCTTGCCGAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: REIWFLPKAGSHGPLDFVAAPKQ*VLPNSL
Trigger: CAAGCTGTTCGGCAAGACCCATTGCTTGGGAGCAGC...CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR CCA 90 bp AGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGAGGACACTTCCTCTGTaGGGACCTGCTGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: REIWFLPKAGSHGPLDFVRTLPL*GPAVSP
Trigger: AGGAGACACAGCAGGTCCCCACAGAGGAAGTGTCCT...CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCAGGGTCCAATCAAGTCATCTaGAAGATCCAGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RGPALKREGAILCAASPGSNQVI*KIQLCS
Trigger: GCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGA...CCCTGGGCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCTCAGGAACTCCTTCTTaGAGACTTTCTCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QKRPRGRYGSSPRQAAMVSGTPS*RLSLAE
Trigger: CTCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGA...GACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CTTATACTCTTGACTCCGAAGGCTGGTGACAGACACATAAGGCAGCTCAAACTCCCTTCTCGGAGTTGCTaGCCAGGCAGGCGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LILLTPKAGDRHIRQLKLPSRSC*PGRRSC
Trigger: GCAGCTCCGCCTGCCTGGCCAGCAACTCCGAGAAGG...GAGTTTGAGCTGCCTTATGTGTCTGTCACCAGCCTTCGGAGTCAAGAGTATAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp AGGAACTCCTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTCCTTCTCGGAGTTGCTaGCCAGGCAGGCGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RNSFLETFSCRDLSCRCCPSRSC*PGRRSC
Trigger: GCAGCTCCGCCTGCCTGGCCAGCAACTCCGAGAAGG...ACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp ATACTAAATGCTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATACCCCGGCCCCGGCCTaGGCTGCTCGTGCTTCCACT +
Preference number: 4 (lower is better)
Translates to: ILNANLASRASSEKRRGNTPAPA*AARAST
Trigger: AGTGGAAGCACGAGCAGCCCAGGCCGGGGCCGGGGT...ATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp TGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCTCAGTTCATCAACCATaGACTGCAAGCAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: WPMAPRGQKRPRGRYGSSSVHQP*TASRCS
Trigger: TGAGCATCTGCTTGCAGTCCATGGTTGATGAACTGA...GGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGCCATAGTGCCGCAGCGTCTAAGGCGAAATTGCCGTaGACATCACTGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: GSQPHRHQSASSHSAAASKAKLP*TSLALA
Trigger: TGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTT...AGACGCTGCGGCACTATGGCTACTTGCGCTTTGATGCCTGTGTGGCTGACTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp CTGTGCTGGGACTGCCAATTCCCCGCAAGCTCACGGCACTCAGCTTACTTGAGAAAGGCGAAATTGCCGTaGACATCACTGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: LCWDCQFPASSRHSAYLRKAKLP*TSLALA
Trigger: TGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTT...TCTCAAGTAAGCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCTTCTGTAAATTCCTCTaGGGTAGAGGGCAGACATCC +
Preference number: 4 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGFCKFL*GRGQTS
Trigger: GGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAA...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCCAGAGGGAGATATaGTTCCTCCCCAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LIWHRGPALKREGAILCAAQREI*FLPKAG
Trigger: GCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGC...TGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCTTAATGATGGGGAACTaGGCCAGACCAAACACAGAC +
Preference number: 4 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGLMMGN*ARPNTD
Trigger: GTCTGTGTTTGGTCTGGCCCAGTTCCCCATCATTAA...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAATGCTGAATTGGCAATaGCAGGCAATTTGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: VQPAQGTRKGRIRGPWPRMLNWQ*QAIWPY
Trigger: GTAAGGCCAAATTGCCTGCCATTGCCAATTCAGCAT...TCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
3UTR CAA 72 bp TGCTGTGTCTCCTGTTGTGCCCGACGCAGGAAACTGTaGAAAGTCTCGCTGCTCCCAAGCAATGGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: CCVSCCARRRKL*KVSLLPSNGSC
Trigger: GCAAGACCCATTGCTTGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCGGGCACAACAGGAGACACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR TCA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCAGGACATCCTCAGTCTaGTCTGAAGTTAGCACGTTG +
Preference number: 4 (lower is better)
Translates to: WHRGPALKREGAILCAASRTSSV*SEVSTL
Trigger: CAACGTGCTAACTTCAGATCAGACTGAGGATGTCCT...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATACAATCTTATACTCTTaGCTCCGAAGGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYTILYS*LRRLVT
Trigger: TGTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGT...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGGACTGCCCCACGCTCAATATCTaGTACCGTCTGAGCATAAAG +
Preference number: 4 (lower is better)
Translates to: RRRNCRGHHWHWHLCWDCPTLNI*YRLSIK
Trigger: CTTTATGCTCAGACGGTATCAGATATTGAGCGTGGG...GCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR TCA 90 bp TCCTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTTGAGCATCGCATGCGGGTaGCCCGGAAGGAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SFLETFSCRDLSCRCCSLSIACG*PGRSLL
Trigger: GAGAAGGCTCCTTCCGGGTCACCCGCATGCGATGCT...CAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp CAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGAATCTTGCCGAACAGCTTaGATGTACTTCTCTAACTGC +
Preference number: 4 (lower is better)
Translates to: QPAQGTRKGRIRGPWPRESCRTA*MYFSNC
Trigger: GCAGTTAGAGAAGTACATGCAAGCTGTTCGGCAAGA...TTCTCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR GCA 90 bp GTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGCCATAGTGTCCTCTGTGGGGACCTaGTGTGTCTCCTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: VLFWEVSHTGIKAQVAIVSSVGT*CVSCCA
Trigger: GGCACAACAGGAGACACAGCAGGTCCCCACAGAGGA...CACTATGGCTACTTGCGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp TGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCGGCAGCTCAAACTCTTaGAACTTCCGTACAAAAGAA +
Preference number: 4 (lower is better)
Translates to: WLQEARSGPEGDMVPPQGGSSNS*NFRTKE
Trigger: TTCTTTTGTACGGAAGTTGCAAGAGTTTGAGCTGCC...GCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CTGTGCTGGGACTGCCAATTCCCCGCAAGCTCACGGCACTCAGCTTACTTGAGATGCAGAGATTTGAGTTaGCGGTGCTGTTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LCWDCQFPASSRHSAYLRCRDLS*RCCSLV
Trigger: CACCAAGGAACAGCACCGGCAACTCAAATCTCTGCA...TCTCAAGTAAGCTGAGTGCCGTGAGCTTGCGGGGAATTGGCAGTCCCAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCTTGGAGACTTTCTCTTaGAGAGATTTGAGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGLETFS*RDLSCR
Trigger: CCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAA...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp GGACACAGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACACATCTGTGCTGGGACTaGCAATTCCCCGCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: GHRHRASFCKFLWGRGQTHLCWD*QFPASS
Trigger: TGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATG...TGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GCACTCAGCTTACTTGAGAGTTTGACCATAGACTCCCGGGTGGCATCAGGTGACAGGACACTTCCTCTGTaGGGACCTGCTGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ALSLLESLTIDSRVASGDRTLPL*GPAVSP
Trigger: AGGAGACACAGCAGGTCCCCACAGAGGAAGTGTCCT...GTCACCTGATGCCACCCGGGAGTCTATGGTCAAACTCTCAAGTAAGCTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp TTTGGCCTTACCCTTAGCATAGTAGTCCATGCTGTGATGGGGGAAGCAGGGGCAAGGACACTTCCTCTGTaGGGACCTGCTGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FGLTLSIVVHAVMGEAGARTLPL*GPAVSP
Trigger: AGGAGACACAGCAGGTCCCCACAGAGGAAGTGTCCT...TGCCCCTGCTTCCCCCATCACAGCATGGACTACTATGCTAAGGGTAAGGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR CCA 90 bp CAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGAATCCAATCAAGTCATCTaGAAGATCCAGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: QPAQGTRKGRIRGPWPRESNQVI*KIQLCS
Trigger: GCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGA...TTCTCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp TCTGAAGTTAGCACGTTGACCAGAACTTTCTGCCCGTTGCTGAGCAGCACTTCCGCTTCCACTGGGCAATaGTACAGAGGAGGTGACCCG +
Preference number: 4 (lower is better)
Translates to: SEVSTLTRTFCPLLSSTSASTGQ*YRGGDP
Trigger: CGGGTCACCTCCTCTGTACCATTGCCCAGTGGAAGC...GGAAGTGCTGCTCAGCAACGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR CCA 90 bp AGGCTGAGTTTAATGATGGGGAACTGGGCCAGACCAAACACAGACCTCTGCCCATGCTCGTGCTTCCACTaGGCAATGGTACAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RLSLMMGNWARPNTDLCPCSCFH*AMVQRR
Trigger: CCTCCTCTGTACCATTGCCCAGTGGAAGCACGAGCA...TGGGCAGAGGTCTGTGTTTGGTCTGGCCCAGTTCCCCATCATTAAACTCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGACTTCACTGCTTGCTaGCTGTCTGAGCGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: EGDMVPPQGRQPWSLRLCDFTAC*LSERLR
Trigger: TCTGAGACGCTCAGACAGCCAGCAAGCAGTGAAGTC...ACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AGCAGTGGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGCACTGGCATCTGTGCTaGGACTGCCAATTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: SSGDYRSSSPMPSKAKLPHWHLC*DCQFPA
Trigger: TGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTG...CGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp GGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATTCAAAACACTGGCATCTGTGCTaGGACTGCCAATTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GLVMVTHCSRSLLMRYSKHWHLC*DCQFPA
Trigger: TGCGGGGAATTGGCAGTCCCAGCACAGATGCCAGTG...TTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp ATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGACATCCAAGCAGTaGAGATTACAGATCCTCATC +
Preference number: 4 (lower is better)
Translates to: MAPRGQKRPRGRYGSSPRQTSKQ*RLQILI
Trigger: GATGAGGATCTGTAATCTCCACTGCTTGGATGTCTG...CCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GCACTCAGCTTACTTGAGAGTTTGACCATAGACTCCCGGGTGGCATCAGGTGACGCTGCTCCCAAGCAATaGGTCTTGCCGAACTCACTC +
Preference number: 4 (lower is better)
Translates to: ALSLLESLTIDSRVASGDAAPKQ*VLPNSL
Trigger: GAGTGAGTTCGGCAAGACCCATTGCTTGGGAGCAGC...GTCACCTGATGCCACCCGGGAGTCTATGGTCAAACTCTCAAGTAAGCTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427123.5
3UTR CAA 72 bp TACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATaGCCGTGGACATCACTGGCACTGGCATCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: YRSSSPMPSKAK*PWTSLALASVL
Trigger: CAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp AGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCTGAAGTTAGCACGTTaGCCAGAACTTTCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: REIWFLPKAGSHGPLDFVLKLAR*PELSAR
Trigger: ACGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAG...CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AGCAGTGGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGGACTCCGAAGGCTGGTaGCAGACACATAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSGDYRSSSPMPSKAKLPDSEGW*QTHKAA
Trigger: AGCTGCCTTATGTGTCTGTCACCAGCCTTCGGAGTC...CGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp AATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTACAATCTTATACTCTTaGCTCCGAAGGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: NPLCSQPRGQGKVGYEAPTILYS*LRRLVT
Trigger: TGTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGT...AGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGGCCGGTCCTTGCTCATaGGGTATTCAAAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: REIWFLPKAGSHGPLDFVAGPCS*GIQKPV
Trigger: AACTGGCTTTTGAATACCTCATGAGCAAGGACCGGC...CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp CTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGGCGCAGCATCTTCCTaGTACTGCCGCCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: LIWHRGPALKREGAILCAGAASS*YCRQIS
Trigger: AGAAATCTGGCGGCAGTATCAGGAAGATGCTGCGCC...TGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AGTATCCAATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGATGCTTGCTGGCTGTCTaGGCGTCTCAGAGTACCCCC +
Preference number: 4 (lower is better)
Translates to: SIQSSHLEDPALQLQPPGCLLAV*ASQSTP
Trigger: GGGGGTACTCTGAGACGCTCAGACAGCCAGCAAGCA...TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp GGACACAGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACACCGAACCTGTGGCAGTaGTTAAAGGGGAACTACAGC +
Preference number: 4 (lower is better)
Translates to: GHRHRASFCKFLWGRGQTPNLWQ*LKGNYS
Trigger: GCTGTAGTTCCCCTTTAATCACTGCCACAGGTTCGG...TGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440760.5
CDS-3UTR GCA 90 bp AGGCTGAGTTTAATGATGGGGAACTGGGCCAGACCAAACACAGACCTCTGCCCACTGTGTCTCCTGTTGTaGCCGACGCAGGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: RLSLMMGNWARPNTDLCPLCLLL*PTQETV
Trigger: AACAGTTTCCTGCGTCGGGCACAACAGGAGACACAG...TGGGCAGAGGTCTGTGTTTGGTCTGGCCCAGTTCCCCATCATTAAACTCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp TTTGGCCTTACCCTTAGCATAGTAGTCCATGCTGTGATGGGGGAAGCAGGGGCACTGTGTCTCCTGTTGTaGCCGACGCAGGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: FGLTLSIVVHAVMGEAGALCLLL*PTQETV
Trigger: AACAGTTTCCTGCGTCGGGCACAACAGGAGACACAG...TGCCCCTGCTTCCCCCATCACAGCATGGACTACTATGCTAAGGGTAAGGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR GCA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGCAGCTCAAACTCTTaGAACTTCCGTACAAAAGAA +
Preference number: 4 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYGSSNS*NFRTKE
Trigger: TTCTTTTGTACGGAAGTTGCAAGAGTTTGAGCTGCC...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp ATACTAAATGCTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATGAGCCTTCTCGGAGTTaGTGGCCAGGCAGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: ILNANLASRASSEKRRGNEPSRS*WPGRRS
Trigger: GCTCCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTC...ATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp AGGAACTCCTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTGGCCTGGGCTGCTCGTaGTTCCACTGGGCAATGGTA +
Preference number: 4 (lower is better)
Translates to: RNSFLETFSCRDLSCRCCGLGCS*FHWAMV
Trigger: TACCATTGCCCAGTGGAAGCACGAGCAGCCCAGGCC...ACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp TGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGTCATCAACCATGGACTaGAAGCAGATGCTCATCATG +
Preference number: 4 (lower is better)
Translates to: CPRRRNCRGHHWHWHLCWSSTMD*KQMLIM
Trigger: CATGATGAGCATCTGCTTGCAGTCCATGGTTGATGA...CCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp GTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGCCATAGTGCATCTGTGCTGGGACTaGCAATTCCCCGCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: VLFWEVSHTGIKAQVAIVHLCWD*QFPASS
Trigger: TGAGCTTGCGGGGAATTGGCAGTCCCAGCACAGATG...CACTATGGCTACTTGCGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp TCTGAAGTTAGCACGTTGACCAGAACTTTCTGCCCGTTGCTGAGCAGCACTTCCCCTCGAAGGCGAAATTaGCGTGGACATCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: SEVSTLTRTFCPLLSSTSPRRRN*RGHHWH
Trigger: GTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGG...GGAAGTGCTGCTCAGCAACGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR CCA 90 bp CATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCAACTCGGTTTCGGGAATaGAAAAGTGCATGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: HRGPALKREGAILCAASPTRFRE*KSACSL
Trigger: TAGGGAACATGCACTTTTCCATTCCCGAAACCGAGT...TGGGCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATTCCAATCAAGTCATCTaGAAGATCCAGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: AWGLVMVTHCSRSLLMRYSNQVI*KIQLCS
Trigger: GCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGA...ATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp GCACTCAGCTTACTTGAGAGTTTGACCATAGACTCCCGGGTGGCATCAGGTGACAGGACAGTCCTTTTCTaGGAAGTCAGCCACACAGGC +
Preference number: 4 (lower is better)
Translates to: ALSLLESLTIDSRVASGDRTVLF*EVSHTG
Trigger: GCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCT...GTCACCTGATGCCACCCGGGAGTCTATGGTCAAACTCTCAAGTAAGCTGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp AGCAGTGGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGTGCTCGTGCTTCCACTaGGCAATGGTACAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SSGDYRSSSPMPSKAKLPCSCFH*AMVQRR
Trigger: CCTCCTCTGTACCATTGCCCAGTGGAAGCACGAGCA...CGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCTCAGTTCATCAACCATaGACTGCAAGCAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: WHRGPALKREGAILCAASSVHQP*TASRCS
Trigger: TGAGCATCTGCTTGCAGTCCATGGTTGATGAACTGA...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTTCAGTTCATCAACCATaGACTGCAAGCAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: NPLCSQPRGQGKVGYEAPSVHQP*TASRCS
Trigger: TGAGCATCTGCTTGCAGTCCATGGTTGATGAACTGA...AGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGACATCCTCGGACATCACTGGCACTaGCATCTGTGCTGGGACTGC +
Preference number: 4 (lower is better)
Translates to: NQVIWKIQLCSYSLQDILGHHWH*HLCWDC
Trigger: GCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCC...GAGGATGTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp TTGCTGAGCAGCACTTCCAAGGACACTTCCTCTGTGGGGACCTGCTGTGTCTCCTTCTGTAAATTCCTCTaGGGTAGAGGGCAGACATCC +
Preference number: 4 (lower is better)
Translates to: LLSSTSKDTSSVGTCCVSFCKFL*GRGQTS
Trigger: GGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAA...GGAGACACAGCAGGTCCCCACAGAGGAAGTGTCCTTGGAAGTGCTGCTCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR CCA 90 bp GTTGCTGAGCAGCACTTCCAAGGACACTTCCTCTGTGGGGACCTGCTGTGTCTCTTCTGTAAATTCCTCTaGGGTAGAGGGCAGACATCC +
Preference number: 4 (lower is better)
Translates to: VAEQHFQGHFLCGDLLCLFCKFL*GRGQTS
Trigger: GGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAA...GAGACACAGCAGGTCCCCACAGAGGAAGTGTCCTTGGAAGTGCTGCTCAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR TCA 90 bp ATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATTCAAAAGCCAGTTCCCAACCCGGTTCTCCATaGCATCGTCATCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: MVTHCSRSLLMRYSKASSQPGSP*HRHHRQ
Trigger: CTGCCTATGATGACGATGTCATGGAGAACCGGGTTG...GGAACTGGCTTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR TCA 90 bp AGACTAAAGTATCCAATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCAGCATCGCATGCGGGTaGCCCGGAAGGAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RLKYPIKSSGRSSFAATASIACG*PGRSLL
Trigger: GAGAAGGCTCCTTCCGGGTCACCCGCATGCGATGCT...GGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGATACTTTAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp TTACTTGAGAGTTTGACCATAGACTCCCGGGTGGCATCAGGTGACTCAAGCAGTATCGAGGGCCAGCTCTaGAAAGAGAAGGGGCAATCC +
Preference number: 4 (lower is better)
Translates to: LLESLTIDSRVASGDSSSIEGQL*KEKGQS
Trigger: GGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGAT...ACTGCTTGAGTCACCTGATGCCACCCGGGAGTCTATGGTCAAACTCTCAAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp CACGCTCAATATCTGATACCGTCTGAGCATAAAGCAGGTTCAGGCCAACCCGGTTGGAAGATCCAGCTTTaGAGCTACAGCCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HAQYLIPSEHKAGSGQPGWKIQL*SYSLQD
Trigger: GTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCA...ACCGGGTTGGCCTGAACCTGCTTTATGCTCAGACGGTATCAGATATTGAGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR GCA 90 bp ACCCGCCGGCGCAGCATCTTCCTGATACTGCCGCCAGATTTCTTCACCATCAGTTCATCAACCATGGACTaGAAGCAGATGCTCATCATG +
Preference number: 4 (lower is better)
Translates to: TRRRSIFLILPPDFFTISSSTMD*KQMLIM
Trigger: CATGATGAGCATCTGCTTGCAGTCCATGGTTGATGA...ACTGATGGTGAAGAAATCTGGCGGCAGTATCAGGAAGATGCTGCGCCGGCGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp TTGCCGAACTCACTCACTGTTTGCATAAATTCTTCACCTGCCCCACCCTTGGCTCCAAACACAGACCTCTaGCCATCCCCTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LPNSLTVCINSSPAPPLAPNTDL*PSPWPL
Trigger: CAAAGGCCAAGGGGATGGGCAGAGGTCTGTGTTTGG...AGCCAAGGGTGGGGCAGGTGAAGAATTTATGCAAACAGTGAGTGAGTTCGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427123.5
CDS-3UTR CCA 90 bp ATCATGATAGCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCACTCGGTTTCGGGAATaGAAAAGTGCATGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: IMIAWGLVMVTHCSRSLLTRFRE*KSACSL
Trigger: TAGGGAACATGCACTTTTCCATTCCCGAAACCGAGT...GAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGCTATCATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp GTTGCTGAGCAGCACTTCCAAGGACACTTCCTCTGTGGGGACCTGCTGTGTCTCTCAGGAACTCCTTCTTaGAGACTTTCTCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VAEQHFQGHFLCGDLLCLSGTPS*RLSLAE
Trigger: CTCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGA...GAGACACAGCAGGTCCCCACAGAGGAAGTGTCCTTGGAAGTGCTGCTCAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR CCA 90 bp GATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCAAAAGACTTCACTGCTTGCTaGCTGTCTGAGCGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: DMVPPQGRQPWSLRLCAKDFTAC*LSERLR
Trigger: TCTGAGACGCTCAGACAGCCAGCAAGCAGTGAAGTC...TTTTGCACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGGACTTCACTGCTTGCTaGCTGTCTGAGCGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKDFTAC*LSERLR
Trigger: TCTGAGACGCTCAGACAGCCAGCAAGCAGTGAAGTC...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTTGGTTGCCGTGGACATCACTaGCACTGGCATCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGDFLLQRFELPVLFLGCRGHH*HWHLCW
Trigger: CCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCA...ACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp AGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGTTCTGTAAATTCCTCTaGGGTAGAGGGCAGACATCC +
Preference number: 4 (lower is better)
Translates to: REIWFLPKAGSHGPLDFVFCKFL*GRGQTS
Trigger: GGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAA...CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTTTAATGATGGGGAACTaGGCCAGACCAAACACAGAC +
Preference number: 4 (lower is better)
Translates to: QREIWFLPKAGSHGPLDFLMMGN*ARPNTD
Trigger: GTCTGTGTTTGGTCTGGCCCAGTTCCCCATCATTAA...AAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp TCCAATGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTACAATCTTATACTCTTaGCTCCGAAGGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: SNALEGEIAVDITGTGICTILYS*LRRLVT
Trigger: TGTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGT...ACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp GGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATTCAAAACCCACGCTCAATATCTaGTACCGTCTCTTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: GLVMVTHCSRSLLMRYSKPTLNI*YRLFLS
Trigger: GCTAAGGAAGAGACGGTATCAGATATTGAGCGTGGG...TTTTGAATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453453.1
CDS-3UTR GCA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGTTGACCAGAACTTTCTaGCCGTTGCTGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKLTRTF*PLLSST
Trigger: AGTGCTGCTCAGCAACGGGCAGAAAGTTCTGGTCAA...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp GATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCAAAATTGACCAGAACTTTCTaGCCGTTGCTGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: DMVPPQGRQPWSLRLCAKLTRTF*PLLSST
Trigger: AGTGCTGCTCAGCAACGGGCAGAAAGTTCTGGTCAA...TTTTGCACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp GATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCAAAATGCAGAGATTTGAGTTaGCGGTGCTGTTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: DMVPPQGRQPWSLRLCAKCRDLS*RCCSLV
Trigger: CACCAAGGAACAGCACCGGCAACTCAAATCTCTGCA...TTTTGCACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp ACCTGCTGTGTCTCCTGTTGTGCCCGACGCAGGAAACTGTTGAAAGTCTCGCTGTTGGAGACTTTCTCTTaGAGAGATTTGAGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: TCCVSCCARRRKLLKVSLLETFS*RDLSCR
Trigger: CCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAA...CAGCGAGACTTTCAACAGTTTCCTGCGTCGGGCACAACAGGAGACACAGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR GCA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGGATCCTCATCTCCAATaGCCTCGAAGGCGAAATTGC +
Preference number: 4 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKDPHLQ*PRRRNC
Trigger: GCAATTTCGCCTTCGAGGGCATTGGAGATGAGGATC...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp AGACTAAAGTATCCAATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCAGGGGCAATCCTCTGTaGAGCCAGCCCAGGGGACAA +
Preference number: 4 (lower is better)
Translates to: RLKYPIKSSGRSSFAATARGNPL*SQPRGQ
Trigger: TTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCCCT...GGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGATACTTTAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp CTTATACTCTTGACTCCGAAGGCTGGTGACAGACACATAAGGCAGCTCAAACTCCCAAACACAGACCTCTaGCCATCCCCTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LILLTPKAGDRHIRQLKLPNTDL*PSPWPL
Trigger: CAAAGGCCAAGGGGATGGGCAGAGGTCTGTGTTTGG...GAGTTTGAGCTGCCTTATGTGTCTGTCACCAGCCTTCGGAGTCAAGAGTATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp AGTATCCAATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGAAGGACACTTCCTCTGTaGGGACCTGCTGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SIQSSHLEDPALQLQPPGRTLPL*GPAVSP
Trigger: AGGAGACACAGCAGGTCCCCACAGAGGAAGTGTCCT...TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp CAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTTCAGGAACTCCTTCTTaGAGACTTTCTCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QREIWFLPKAGSHGPLDFSGTPS*RLSLAE
Trigger: CTCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGA...AAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR CAA 72 bp TCTGAAGTTAGCACGTTGACCAGAACTTTCTGCCCGTaGCTGAGCAGCACTTCCAAGGACACTTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SEVSTLTRTFCP*LSSTSKDTSSV
Trigger: CACAGAGGAAGTGTCCTTGGAAGTGCTGCTCAGCAACGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR TCA 90 bp TTGCCGAACTCACTCACTGTTTGCATAAATTCTTCACCTGCCCCACCCTTGGCTCTGAAGTTAGCACGTTaGCCAGAACTTTCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: LPNSLTVCINSSPAPPLALKLAR*PELSAR
Trigger: ACGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAG...AGCCAAGGGTGGGGCAGGTGAAGAATTTATGCAAACAGTGAGTGAGTTCGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427123.5
CDS-3UTR TCA 90 bp AATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGACATCCTCCTGAAGTTAGCACGTTaGCCAGAACTTTCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: NQVIWKIQLCSYSLQDILLKLAR*PELSAR
Trigger: ACGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAG...GAGGATGTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp ACGTTGACCAGAACTTTCTGCCCGTTGCTGAGCAGCACTTCCAAGGACACTTCCACAATCTTATACTCTTaGCTCCGAAGGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: TLTRTFCPLLSSTSKDTSTILYS*LRRLVT
Trigger: TGTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGT...GGAAGTGTCCTTGGAAGTGCTGCTCAGCAACGGGCAGAAAGTTCTGGTCAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR GCA 90 bp AGCACTTCCAAGGACACTTCCTCTGTGGGGACCTGCTGTGTCTCCTGTTGTGCCGTCTATAGAACAGCTTaGATGTACTTCTCTAACTGC +
Preference number: 4 (lower is better)
Translates to: STSKDTSSVGTCCVSCCAVYRTA*MYFSNC
Trigger: GCAGTTAGAGAAGTACATGCAAGCTGTTCTATAGAC...GGCACAACAGGAGACACAGCAGGTCCCCACAGAGGAAGTGTCCTTGGAAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427123.5
CDS-3UTR CCA 90 bp AGGCTGAGTTTAATGATGGGGAACTGGGCCAGACCAAACACAGACCTCTGCCCAACTCGGTTTCGGGAATaGAAAAGTGCATGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: RLSLMMGNWARPNTDLCPTRFRE*KSACSL
Trigger: TAGGGAACATGCACTTTTCCATTCCCGAAACCGAGT...TGGGCAGAGGTCTGTGTTTGGTCTGGCCCAGTTCCCCATCATTAAACTCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp GATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCAAAAAGAGAAAAGCTTCTTTaGGGGGAATGCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: DMVPPQGRQPWSLRLCAKREKLL*GECRKH
Trigger: GTGCTTCCTGCATTCCCCCCAAAGAAGCTTTTCTCT...TTTTGCACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000537606.5
CDS-3UTR CCA 90 bp GTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGCCATAGTGAGAGAAAAGCTTCTTTaGGGGGAATGCAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: VLFWEVSHTGIKAQVAIVREKLL*GECRKH
Trigger: GTGCTTCCTGCATTCCCCCCAAAGAAGCTTTTCTCT...CACTATGGCTACTTGCGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427123.5
CDS-3UTR CCA 90 bp TTGAAAGTCTCGCTGCTCCCAAGCAATGGGTCTTGCCGAACCTGTGGCAGTGATCAGACATCCAAGCAGTaGAGATTACAGATCCTCATC +
Preference number: 4 (lower is better)
Translates to: LKVSLLPSNGSCRTCGSDQTSKQ*RLQILI
Trigger: GATGAGGATCTGTAATCTCCACTGCTTGGATGTCTG...ATCACTGCCACAGGTTCGGCAAGACCCATTGCTTGGGAGCAGCGAGACTTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440760.5
CDS-3UTR CCA 90 bp TGCAAAATACTAAATGCTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGCATCCCCTTGGCCTTTaGCCCATGGCTCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: CKILNANLASRASSEKRRHPLGL*PMAPRG
Trigger: GCCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATG...CCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTATTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGTTAATGATGGGGAACTaGGCCAGACCAAACACAGAC +
Preference number: 4 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKLMMGN*ARPNTD
Trigger: GTCTGTGTTTGGTCTGGCCCAGTTCCCCATCATTAA...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp AGTATCCAATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGACTGAAGTTAGCACGTTaGCCAGAACTTTCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: SIQSSHLEDPALQLQPPGLKLAR*PELSAR
Trigger: ACGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAG...TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp CATAAGGCAGCTCAAACTCTTGCAACTTCCGTACAAAAGAAAAGGCTCCATCCTGACTCCGAAGGCTGGTaGCAGACACATAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HKAAQTLATSVQKKRLHPDSEGW*QTHKAA
Trigger: AGCTGCCTTATGTGTCTGTCACCAGCCTTCGGAGTC...AGGATGGAGCCTTTTCTTTTGTACGGAAGTTGCAAGAGTTTGAGCTGCCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp AATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGACATCCTCCCCACGCTCAATATCTaGTACCGTCTGAGCATAAAG +
Preference number: 4 (lower is better)
Translates to: NQVIWKIQLCSYSLQDILPTLNI*YRLSIK
Trigger: CTTTATGCTCAGACGGTATCAGATATTGAGCGTGGG...GAGGATGTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR TCA 90 bp AGTATCCAATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGATGGCTGCCATCTAGGTaGGTCCAGTCTATAGAACAG +
Preference number: 4 (lower is better)
Translates to: SIQSSHLEDPALQLQPPGWLPSR*VQSIEQ
Trigger: CTGTTCTATAGACTGGACTCACCTAGATGGCAGCCA...TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427123.5
CDS-3UTR GCA 90 bp ACGTTGACCAGAACTTTCTGCCCGTTGCTGAGCAGCACTTCCAAGGACACTTCCGGCAGCTCAAACTCTTaGAACTTCCGTACAAAAGAA +
Preference number: 4 (lower is better)
Translates to: TLTRTFCPLLSSTSKDTSGSSNS*NFRTKE
Trigger: TTCTTTTGTACGGAAGTTGCAAGAGTTTGAGCTGCC...GGAAGTGTCCTTGGAAGTGCTGCTCAGCAACGGGCAGAAAGTTCTGGTCAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR GCA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGTTGGAGACTTTCTCTTaGAGAGATTTGAGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKLETFS*RDLSCR
Trigger: CCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAA...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp CAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTAACTCACTCACTGTTTaGATAAATTCTTCACCTGCC +
Preference number: 4 (lower is better)
Translates to: QREIWFLPKAGSHGPLDFNSLTV*INSSPA
Trigger: GGCAGGTGAAGAATTTATGCAAACAGTGAGTGAGTT...AAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427123.5
CDS-3UTR CCA 90 bp GATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCAAAATCCAATCAAGTCATCTaGAAGATCCAGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: DMVPPQGRQPWSLRLCAKSNQVI*KIQLCS
Trigger: GCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGA...TTTTGCACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CATAAGGCAGCTCAAACTCTTGCAACTTCCGTACAAAAGAAAAGGCTCCATCCTTGCTCGTGCTTCCACTaGGCAATGGTACAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HKAAQTLATSVQKKRLHPCSCFH*AMVQRR
Trigger: CCTCCTCTGTACCATTGCCCAGTGGAAGCACGAGCA...AGGATGGAGCCTTTTCTTTTGTACGGAAGTTGCAAGAGTTTGAGCTGCCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp CACGCTCAATATCTGATACCGTCTGAGCATAAAGCAGGTTCAGGCCAACCCGGTTCAGTTCATCAACCATaGACTGCAAGCAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: HAQYLIPSEHKAGSGQPGSVHQP*TASRCS
Trigger: TGAGCATCTGCTTGCAGTCCATGGTTGATGAACTGA...ACCGGGTTGGCCTGAACCTGCTTTATGCTCAGACGGTATCAGATATTGAGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR CCA 90 bp CTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCATCAGTTCATCAACCATaGACTGCAAGCAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: LIWHRGPALKREGAILCASVHQP*TASRCS
Trigger: TGAGCATCTGCTTGCAGTCCATGGTTGATGAACTGA...TGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp TGCAAAATACTAAATGCTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGTGCCGTGGACATCACTaGCACTGGCATCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CKILNANLASRASSEKRRCRGHH*HWHLCW
Trigger: CCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCA...CCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTATTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGCAGACATCCAAGCAGTaGAGATTACAGATCCTCATC +
Preference number: 4 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKQTSKQ*RLQILI
Trigger: GATGAGGATCTGTAATCTCCACTGCTTGGATGTCTG...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
3UTR CAA 72 bp TTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTaGGTGACCAAGATCCACCCACGCTCAATATCTGAT +
Preference number: 4 (lower is better)
Translates to: FSCRDLSCRCCS*VTKIHPRSISD
Trigger: ATCAGATATTGAGCGTGGGTGGATCTTGGTCACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp AGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACATCCAAGGGCAGCTCAAACTCTTaGAACTTCCGTACAAAAGAA +
Preference number: 4 (lower is better)
Translates to: RHRASFCKFLWGRGQTSKGSSNS*NFRTKE
Trigger: TTCTTTTGTACGGAAGTTGCAAGAGTTTGAGCTGCC...CTTGGATGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp GTATCCAATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGACTTGGAGACTTTCTCTTaGAGAGATTTGAGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: VSNQVIWKIQLCSYSLQDLETFS*RDLSCR
Trigger: CCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAA...GTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR GCA 90 bp AGTATCCAATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGACCAAGCAATGGGTCTTaGCGAACTCACTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: SIQSSHLEDPALQLQPPGPSNGS*RTHSLF
Trigger: AAACAGTGAGTGAGTTCGGCAAGACCCATTGCTTGG...TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427123.5
CDS-3UTR CCA 90 bp GTATCCAATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGACTCAGGAACTCCTTCTTaGAGACTTTCTCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VSNQVIWKIQLCSYSLQDSGTPS*RLSLAE
Trigger: CTCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGA...GTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp TCCAAGCAGTGGAGATTACAGATCCTCATCTCCAATGCCCTCGAAGGCGAAATTTTAATGATGGGGAACTaGGCCAGACCAAACACAGAC +
Preference number: 4 (lower is better)
Translates to: SKQWRLQILISNALEGEILMMGN*ARPNTD
Trigger: GTCTGTGTTTGGTCTGGCCCAGTTCCCCATCATTAA...AATTTCGCCTTCGAGGGCATTGGAGATGAGGATCTGTAATCTCCACTGCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp ATACTAAATGCTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATTCTCTTGCAGAGATTTaGGTTGCCGGTGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: ILNANLASRASSEKRRGNSLAEI*VAGAVP
Trigger: AGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGA...ATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp TGCAAAATACTAAATGCTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGTGGAAGATCCAGCTTTaGAGCTACAGCCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: CKILNANLASRASSEKRRWKIQL*SYSLQD
Trigger: GTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCA...CCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTATTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CCA 90 bp CTTATACTCTTGACTCCGAAGGCTGGTGACAGACACATAAGGCAGCTCAAACTCCAGACATCCAAGCAGTaGAGATTACAGATCCTCATC +
Preference number: 4 (lower is better)
Translates to: LILLTPKAGDRHIRQLKLQTSKQ*RLQILI
Trigger: GATGAGGATCTGTAATCTCCACTGCTTGGATGTCTG...GAGTTTGAGCTGCCTTATGTGTCTGTCACCAGCCTTCGGAGTCAAGAGTATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp ATACTAAATGCTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATAGGACATCCTCAGTCTaGTCTGAAGTTAGCACGTTG +
Preference number: 4 (lower is better)
Translates to: ILNANLASRASSEKRRGNRTSSV*SEVSTL
Trigger: CAACGTGCTAACTTCAGATCAGACTGAGGATGTCCT...ATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR TCA 90 bp GAAAAGGCTCCATCCTCTTTTTCTCGAACTAAGAATAGACTAAAGTATCCAATCCTTTCTGCCCGTTGCTaGGCAGCACTTCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: EKAPSSFSRTKNRLKYPILSARC*AALPRT
Trigger: TGTCCTTGGAAGTGCTGCTCAGCAACGGGCAGAAAG...GATTGGATACTTTAGTCTATTCTTAGTTCGAGAAAAAGAGGATGGAGCCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR TCA 90 bp TGCAAAATACTAAATGCTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGCCCACGCTCAATATCTaGTACCGTCTGAGCATAAAG +
Preference number: 4 (lower is better)
Translates to: CKILNANLASRASSEKRRPTLNI*YRLSIK
Trigger: CTTTATGCTCAGACGGTATCAGATATTGAGCGTGGG...CCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTATTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000537606.5
CDS-3UTR CCA 90 bp GAAAAGGCTCCATCCTCTTTTTCTCGAACTAAGAATAGACTAAAGTATCCAATCAGGACACTTCCTCTGTaGGGACCTGCTGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: EKAPSSFSRTKNRLKYPIRTLPL*GPAVSP
Trigger: AGGAGACACAGCAGGTCCCCACAGAGGAAGTGTCCT...GATTGGATACTTTAGTCTATTCTTAGTTCGAGAAAAAGAGGATGGAGCCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp ATACTAAATGCTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCAGACATCCAAGCAGTaGAGATTACAGATCCTCATC +
Preference number: 4 (lower is better)
Translates to: ILNANLASRASSEKRRGNQTSKQ*RLQILI
Trigger: GATGAGGATCTGTAATCTCCACTGCTTGGATGTCTG...ATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR GCA 90 bp GAAAAGGCTCCATCCTCTTTTTCTCGAACTAAGAATAGACTAAAGTATCCAATCTTGACCAGAACTTTCTaGCCGTTGCTGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: EKAPSSFSRTKNRLKYPILTRTF*PLLSST
Trigger: AGTGCTGCTCAGCAACGGGCAGAAAGTTCTGGTCAA...GATTGGATACTTTAGTCTATTCTTAGTTCGAGAAAAAGAGGATGGAGCCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp AAAGAAAAGGCTCCATCCTCTTTTTCTCGAACTAAGAATAGACTAAAGTATCCAAGGACAGTCCTTTTCTaGGAAGTCAGCCACACAGGC +
Preference number: 4 (lower is better)
Translates to: KEKAPSSFSRTKNRLKYPRTVLF*EVSHTG
Trigger: GCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCT...TGGATACTTTAGTCTATTCTTAGTTCGAGAAAAAGAGGATGGAGCCTTTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp GAAAAGGCTCCATCCTCTTTTTCTCGAACTAAGAATAGACTAAAGTATCCAATCTCCAATCAAGTCATCTaGAAGATCCAGCTTTGCAGC +
Preference number: 4 (lower is better)
Translates to: EKAPSSFSRTKNRLKYPISNQVI*KIQLCS
Trigger: GCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGA...GATTGGATACTTTAGTCTATTCTTAGTTCGAGAAAAAGAGGATGGAGCCTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CCA 90 bp AAAGAAAAGGCTCCATCCTCTTTTTCTCGAACTAAGAATAGACTAAAGTATCCATCAGGAACTCCTTCTTaGAGACTTTCTCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: KEKAPSSFSRTKNRLKYPSGTPS*RLSLAE
Trigger: CTCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGA...TGGATACTTTAGTCTATTCTTAGTTCGAGAAAAAGAGGATGGAGCCTTTTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS CCA 90 bp AGGCGGAGCCGCCGCTGTCCCCGCTGCGGGACTCGGTTTCGGGAATaGAAAAGTGCATGTTCCCTACGGCACGGCACGGCCGGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: RRSRRCPRCGTRFRE*KSACSLRHGTAGLR
Trigger: CCGGAGCCCGGCCGTGCCGTGCCGTAGGGAACATGCACTTTTCCATTCCCGAAACCGAGTCCCGCAGCGGGGACAGCGGCGGCTCCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000464279.5
ENST00000484886.1
ENST00000489402.1
ENST00000494893.5
ENST00000537606.5
CDS-3UTR CAA 90 bp CGCATGCGGGTGACCCGGAAGGAGCCTTCTCGGAGTTGCTGGCCAGGCAGGCGGGGAGCCTTCTCGGAGTaGCTGGCCAGGCAGGCGGAG +
Preference number: 5 (lower is better)
Translates to: RMRVTRKEPSRSCWPGRRGAFSE*LARQAE
Trigger: CTCCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTCC...CCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTCCTTCCGGGTCACCCGCATGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS GCA 90 bp CCGCCGCTGTCCCCGCTGCGGGACTCGGTTTCGGGAATGGAAAAGTaGATGTTCCCTACGGCACGGCACGGCCGGGCTCCGGACTGTGAG +
Preference number: 5 (lower is better)
Translates to: PPLSPLRDSVSGMEK*MFPTARHGRAPDCE
Trigger: CTCACAGTCCGGAGCCCGGCCGTGCCGTGCCGTAGGGAACATGCACTTTTCCATTCCCGAAACCGAGTCCCGCAGCGGGGACAGCGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000464279.5
ENST00000484886.1
ENST00000489402.1
ENST00000494893.5
ENST00000537606.5
CDS GCA 90 bp CTGCTCAGCGAGTCCCCGCAGCCTCACTCGCCATTTTGGGAGCCCTaGGATCCGATGTGGGAAGGCGGTGGGACGTCGGTTCTGGGACGC +
Preference number: 5 (lower is better)
Translates to: LLSESPQPHSPFWEP*DPMWEGGGTSVLGR
Trigger: GCGTCCCAGAACCGACGTCCCACCGCCTTCCCACATCGGATCGCAGGGCTCCCAAAATGGCGAGTGAGGCTGCGGGGACTCGCTGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537606.5
CDS CCA 90 bp TCCCCGCAGCCTCACTCGCCATTTTGGGAGCCCTGCGATCCGATGTaGGAAGGCGGTGGGACGTCGGTTCTGGGACGCAATCGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: SPQPHSPFWEPCDPM*EGGGTSVLGRNRLG
Trigger: GCCCAGGCGATTGCGTCCCAGAACCGACGTCCCACCGCCTTCCCACATCGGATCGCAGGGCTCCCAAAATGGCGAGTGAGGCTGCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537606.5
CDS-3UTR CAA 90 bp CCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAGGAGCCTTCTCGGAGTaGCTGGCCAGGCAGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PMAPRGQKRPRGRYGSSPGAFSE*LARQAE
Trigger: CTCCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTCC...TGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCCTCTGCCCATCCCCTaGGCCTTTGGCCCATGGCTC +
Preference number: 5 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPPLPIP*AFGPWL
Trigger: GAGCCATGGGCCAAAGGCCAAGGGGATGGGCAGAGG...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGCCATCCCCTTGGCCTTaGGCCCATGGCTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: ARSGPEGDMVPPQGRQPWPSPWP*AHGSKR
Trigger: CCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATGG...CCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS CCA 90 bp TCACTCGCCATTTTGGGAGCCCTGCGATCCGATGTGGGAAGGCGGTaGGACGTCGGTTCTGGGACGCAATCGCCTGGGCATGCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: SLAILGALRSDVGRR*DVGSGTQSPGHAGN
Trigger: GTTCCCAGCATGCCCAGGCGATTGCGTCCCAGAACCGACGTCCCACCGCCTTCCCACATCGGATCGCAGGGCTCCCAAAATGGCGAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537606.5
CDS-3UTR CAA 90 bp AAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTAGGCTGAGCTCACTGTaGCCCGCGCTCACCACCACA +
Preference number: 5 (lower is better)
Translates to: KRPRGRYGSSPRQAAMVPRLSSL*PALTTT
Trigger: TGTGGTGGTGAGCGCGGGCAACAGTGAGCTCAGCCT...AGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCGGAGCCTTCTCGGAGTaGCTGGCCAGGCAGGCGGAG +
Preference number: 5 (lower is better)
Translates to: WHRGPALKREGAILCAASGAFSE*LARQAE
Trigger: CTCCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTCC...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp TGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCCCATCCCCTTGGCCTTaGGCCCATGGCTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: WLQEARSGPEGDMVPPQGPSPWP*AHGSKR
Trigger: CCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATGG...GCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp TTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCTCTGCCCATCCCCTaGGCCTTTGGCCCATGGCTC +
Preference number: 5 (lower is better)
Translates to: LAHGSKRPEAAQREIWFLPLPIP*AFGPWL
Trigger: GAGCCATGGGCCAAAGGCCAAGGGGATGGGCAGAGG...GAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp AAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTGCCTCACTCGCCATTTaGGGAGCCCTGCGATCCGAT +
Preference number: 5 (lower is better)
Translates to: KRPRGRYGSSPRQAAMVPASLAI*GALRSD
Trigger: ATCGGATCGCAGGGCTCCCAAAATGGCGAGTGAGGC...AGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233575.7
ENST00000440760.5
ENST00000537606.5
CDS-3UTR CAA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCTGCCGGTGCTGTTCCTaGGTGACCAAGATCCACCCA +
Preference number: 5 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPCRCCS*VTKIHP
Trigger: TGGGTGGATCTTGGTCACCAAGGAACAGCACCGGCA...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp ATCATGATAGCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCGGAGCCTTCTCGGAGTaGCTGGCCAGGCAGGCGGAG +
Preference number: 5 (lower is better)
Translates to: IMIAWGLVMVTHCSRSLLGAFSE*LARQAE
Trigger: CTCCGCCTGCCTGGCCAGCAACTCCGAGAAGGCTCC...GAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGCTATCATGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp ATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCCATCCCCTTGGCCTTaGGCCCATGGCTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: MAPRGQKRPRGRYGSSPRPSPWP*AHGSKR
Trigger: CCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATGG...CCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp ATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGGCCTCACTCGCCATTTaGGGAGCCCTGCGATCCGAT +
Preference number: 5 (lower is better)
Translates to: MAPRGQKRPRGRYGSSPRASLAI*GALRSD
Trigger: ATCGGATCGCAGGGCTCCCAAAATGGCGAGTGAGGC...CCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233575.7
ENST00000440760.5
ENST00000537606.5
CDS-3UTR CAA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCTGGAAGATCCAGCTTaGCAGCTACAGCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPLEDPA*QLQPPG
Trigger: TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAG...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGCTGGAAGATCCAGCTTaGCAGCTACAGCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: ARSGPEGDMVPPQGRQPWLEDPA*QLQPPG
Trigger: TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAG...CCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp CCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCATGCCGGTGCTGTTCCTaGGTGACCAAGATCCACCCA +
Preference number: 5 (lower is better)
Translates to: PMAPRGQKRPRGRYGSSPCRCCS*VTKIHP
Trigger: TGGGTGGATCTTGGTCACCAAGGAACAGCACCGGCA...TGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp TGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGAGGCTGAGCTCACTGTaGCCCGCGCTCACCACCACA +
Preference number: 5 (lower is better)
Translates to: CPRRRNCRGHHWHWHLCWRLSSL*PALTTT
Trigger: TGTGGTGGTGAGCGCGGGCAACAGTGAGCTCAGCCT...CCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCAGGCTGAGCTCACTGTaGCCCGCGCTCACCACCACA +
Preference number: 5 (lower is better)
Translates to: WHRGPALKREGAILCAASRLSSL*PALTTT
Trigger: TGTGGTGGTGAGCGCGGGCAACAGTGAGCTCAGCCT...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp AAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTCCCTCGAAGGCGAAATaGCCGTGGACATCACTGGCA +
Preference number: 5 (lower is better)
Translates to: KRPRGRYGSSPRQAAMVPPSKAK*PWTSLA
Trigger: TGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGG...AGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp AAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCCCTCGAAGGCGAAATaGCCGTGGACATCACTGGCA +
Preference number: 5 (lower is better)
Translates to: KRPEAAQREIWFLPKAGSPSKAK*PWTSLA
Trigger: TGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGG...GCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCATCCCCTTGGCCTTaGGCCCATGGCTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: WHRGPALKREGAILCAASPSPWP*AHGSKR
Trigger: CCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATGG...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGAATGCAGGAAGCACATaGGCCCCATACTCCTTCCGA +
Preference number: 5 (lower is better)
Translates to: ARSGPEGDMVPPQGRQPWNAGST*APYSFR
Trigger: TCGGAAGGAGTATGGGGCCAATGTGCTTCCTGCATT...CCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000537606.5
CDS-3UTR CAA 90 bp TGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCCGACGCAGGAAACTGTaGAAAGTCTCGCTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: WLQEARSGPEGDMVPPQGRRRKL*KVSLLP
Trigger: TGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCG...GCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp AAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCTGGAAGATCCAGCTTaGCAGCTACAGCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: KRPEAAQREIWFLPKAGSLEDPA*QLQPPG
Trigger: TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAG...GCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp TCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCTGGAAGATCCAGCTTaGCAGCTACAGCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: SSVQPAQGTRKGRIRGPWLEDPA*QLQPPG
Trigger: TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAG...CCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp AGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATCCCAAGCAATGGGTCTaGCCGAACAGCTTGCATGTA +
Preference number: 5 (lower is better)
Translates to: RPEAAQREIWFLPKAGSHPKQWV*PNSLHV
Trigger: TACATGCAAGCTGTTCGGCAAGACCCATTGCTTGGG...ATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR CAA 90 bp AATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTCTGCTGTGTCTCCTGTaGTGCCCGACGCAGGAAACT +
Preference number: 5 (lower is better)
Translates to: NPLCSQPRGQGKVGYEAPLLCLL*CPTQET
Trigger: AGTTTCCTGCGTCGGGCACAACAGGAGACACAGCAG...AGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp CCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGAACTTTCTGCCCGTaGCTGAGCAGCACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: PMAPRGQKRPRGRYGSSPRTFCP*LSSTSK
Trigger: CTTGGAAGTGCTGCTCAGCAACGGGCAGAAAGTTCT...TGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp AGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATAGAACTTTCTGCCCGTaGCTGAGCAGCACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: RPEAAQREIWFLPKAGSHRTFCP*LSSTSK
Trigger: CTTGGAAGTGCTGCTCAGCAACGGGCAGAAAGTTCT...ATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCTGCCGGTGCTGTTCCTaGGTGACCAAGATCCACCCA +
Preference number: 5 (lower is better)
Translates to: WHRGPALKREGAILCAASCRCCS*VTKIHP
Trigger: TGGGTGGATCTTGGTCACCAAGGAACAGCACCGGCA...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTTGCAGAGATTTGAGTaGCCGGTGCTGTTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: ARSGPEGDMVPPQGRQPWLQRFE*PVLFLG
Trigger: ACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAA...CCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp AGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGAGGCTGAGCTCACTGTaGCCCGCGCTCACCACCACA +
Preference number: 5 (lower is better)
Translates to: REIWFLPKAGSHGPLDFVRLSSL*PALTTT
Trigger: TGTGGTGGTGAGCGCGGGCAACAGTGAGCTCAGCCT...CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp CGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTGCTGGGACTGCCCCTCGAAGGCGAAATaGCCGTGGACATCACTGGCA +
Preference number: 5 (lower is better)
Translates to: RRRNCRGHHWHWHLCWDCPSKAK*PWTSLA
Trigger: TGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGG...GCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCAATGCAGGAAGCACATaGGCCCCATACTCCTTCCGA +
Preference number: 5 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGNAGST*APYSFR
Trigger: TCGGAAGGAGTATGGGGCCAATGTGCTTCCTGCATT...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000537606.5
CDS-3UTR CAA 90 bp AGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTTCTGAAGTTAGCACGTaGACCAGAACTTTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: SGPEGDMVPPQGRQPWSLSEVST*TRTFCP
Trigger: CGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAGA...AAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp AGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATTTGCAGAGATTTGAGTaGCCGGTGCTGTTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: RPEAAQREIWFLPKAGSHLQRFE*PVLFLG
Trigger: ACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAA...ATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGCTCAGGAACTCCTTCTaGGAGACTTTCTCTTGCAGA +
Preference number: 5 (lower is better)
Translates to: ARSGPEGDMVPPQGRQPWLRNSF*ETFSCR
Trigger: TCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGAG...CCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCACTGTAGCCGGTCCTaGCTCATGAGGTATTCAAAA +
Preference number: 5 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPHCSRS*LMRYSK
Trigger: TTTTGAATACCTCATGAGCAAGGACCGGCTACAGTG...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp AGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATAGCTTACTTGAGAGTTaGACCATAGACTCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: RPEAAQREIWFLPKAGSHSLLES*TIDSRV
Trigger: CACCCGGGAGTCTATGGTCAAACTCTCAAGTAAGCT...ATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCAAAACCTCTGCCCATCCCCTaGGCCTTTGGCCCATGGCTC +
Preference number: 5 (lower is better)
Translates to: DMVPPQGRQPWSLRLCAKPLPIP*AFGPWL
Trigger: GAGCCATGGGCCAAAGGCCAAGGGGATGGGCAGAGG...TTTTGCACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGCCATAGTGCCTCTGCCCATCCCCTaGGCCTTTGGCCCATGGCTC +
Preference number: 5 (lower is better)
Translates to: VLFWEVSHTGIKAQVAIVPLPIP*AFGPWL
Trigger: GAGCCATGGGCCAAAGGCCAAGGGGATGGGCAGAGG...CACTATGGCTACTTGCGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp CAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTCCAGGGGACCTTGCCTaGACTGAGGCACTTCACGAG +
Preference number: 5 (lower is better)
Translates to: QREIWFLPKAGSHGPLDFPGDLA*TEALHE
Trigger: CTCGTGAAGTGCCTCAGTCAAGGCAAGGTCCCCTGG...AAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS TCA 90 bp GTCCCACCCAAAGCCCTACCTGTTGTGCCCGACGCAGGAAACTGTTaGAAGTCTCGCTGCTCCCAAGCAATGGGTCTTGCCGAACAGCTT +
Preference number: 5 (lower is better)
Translates to: VPPKALPVVPDAGNC*KSRCSQAMGLAEQL
Trigger: AAGCTGTTCGGCAAGACCCATTGCTTGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCGGGCACAACAGGTAGGGCTTTGGGTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464279.5
CDS-3UTR CAA 90 bp GAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTCTGCTGTGTCTCCTGTaGTGCCCGACGCAGGAAACT +
Preference number: 5 (lower is better)
Translates to: EGDMVPPQGRQPWSLRLCLLCLL*CPTQET
Trigger: AGTTTCCTGCGTCGGGCACAACAGGAGACACAGCAG...ACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCAGGCAGCTCAAACTCTaGCAACTTCCGTACAAAAGA +
Preference number: 5 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPRQLKL*QLPYKR
Trigger: TCTTTTGTACGGAAGTTGCAAGAGTTTGAGCTGCCT...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp CAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCACAATCTTATACTCTaGACTCCGAAGGCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: QKRPRGRYGSSPRQAAMVHNLIL*TPKAGD
Trigger: GTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGTG...GACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp AAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTCTTGGAGACTTTCTCTaGCAGAGATTTGAGTTGCCG +
Preference number: 5 (lower is better)
Translates to: KRPRGRYGSSPRQAAMVPLGDFL*QRFELP
Trigger: CGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAG...AGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp CCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCACTCAGGAACTCCTTCTaGGAGACTTTCTCTTGCAGA +
Preference number: 5 (lower is better)
Translates to: PMAPRGQKRPRGRYGSSPLRNSF*ETFSCR
Trigger: TCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGAG...TGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp AAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTCACTGTAGCCGGTCCTaGCTCATGAGGTATTCAAAA +
Preference number: 5 (lower is better)
Translates to: KRPRGRYGSSPRQAAMVPHCSRS*LMRYSK
Trigger: TTTTGAATACCTCATGAGCAAGGACCGGCTACAGTG...AGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCATACTAAATGCTAATTaGGCATCGAGGGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPILNAN*ASRASS
Trigger: AGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCATGTCTATGCTGAATaGGCAATGGCAGGCAATTTG +
Preference number: 5 (lower is better)
Translates to: GPWLQEARSGPEGDMVPPHVYAE*AMAGNL
Trigger: CAAATTGCCTGCCATTGCCAATTCAGCATAGACATG...GGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR CAA 90 bp CATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCACCCAAGCAATGGGTCTaGCCGAACTCACTCACTGTT +
Preference number: 5 (lower is better)
Translates to: HRGPALKREGAILCAASPPKQWV*PNSLTV
Trigger: AACAGTGAGTGAGTTCGGCAAGACCCATTGCTTGGG...TGGGCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427123.5
CDS-3UTR CAA 90 bp CACCACCACAGGACAGTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGCGACGCAGGAAACTGTaGAAAGTCTCGCTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: HHHRTVLFWEVSHTGIKARRRKL*KVSLLP
Trigger: TGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCG...CGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCTGTGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp AGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCGACGCAGGAAACTGTaGAAAGTCTCGCTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: REIWFLPKAGSHGPLDFVRRRKL*KVSLLP
Trigger: TGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCG...CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp CCTCATCTCCAATGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGAGAACTTTCTGCCCGTaGCTGAGCAGCACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: PHLQCPRRRNCRGHHWHWRTFCP*LSSTSK
Trigger: CTTGGAAGTGCTGCTCAGCAACGGGCAGAAAGTTCT...CCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGAGATGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp CATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCCATCTGAAGTTAGCACGTaGACCAGAACTTTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: HRGPALKREGAILCAASPSEVST*TRTFCP
Trigger: CGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAGA...TGGGCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATTCTGAAGTTAGCACGTaGACCAGAACTTTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: AWGLVMVTHCSRSLLMRYSEVST*TRTFCP
Trigger: CGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAGA...ATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCTCTGAAGTTAGCACGTaGACCAGAACTTTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: WHRGPALKREGAILCAASSEVST*TRTFCP
Trigger: CGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAGA...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp TTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCACAATCTTATACTCTaGACTCCGAAGGCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: LAHGSKRPEAAQREIWFLHNLIL*TPKAGD
Trigger: GTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGTG...GAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCATGAGGTATTTGCAGAGATTTGAGTaGCCGGTGCTGTTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: AWGLVMVTHCSRSLLMRYLQRFE*PVLFLG
Trigger: ACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAA...ATACCTCATGAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCTTGCAGAGATTTGAGTaGCCGGTGCTGTTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: WHRGPALKREGAILCAASLQRFE*PVLFLG
Trigger: ACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAA...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GGGCAATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCTCAGGAACTCCTTCTaGGAGACTTTCTCTTGCAGA +
Preference number: 5 (lower is better)
Translates to: GQSSVQPAQGTRKGRIRGLRNSF*ETFSCR
Trigger: TCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGAG...GCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp ATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGCACTGTAGCCGGTCCTaGCTCATGAGGTATTCAAAA +
Preference number: 5 (lower is better)
Translates to: MAPRGQKRPRGRYGSSPRHCSRS*LMRYSK
Trigger: TTTTGAATACCTCATGAGCAAGGACCGGCTACAGTG...CCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GGACACAGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACACCCTCGAAGGCGAAATaGCCGTGGACATCACTGGCA +
Preference number: 5 (lower is better)
Translates to: GHRHRASFCKFLWGRGQTPSKAK*PWTSLA
Trigger: TGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGG...TGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GCACTCAGCTTACTTGAGAGTTTGACCATAGACTCCCGGGTGGCATCAGGTGACCCCTCGAAGGCGAAATaGCCGTGGACATCACTGGCA +
Preference number: 5 (lower is better)
Translates to: ALSLLESLTIDSRVASGDPSKAK*PWTSLA
Trigger: TGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGG...GTCACCTGATGCCACCCGGGAGTCTATGGTCAAACTCTCAAGTAAGCTGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS TCA 90 bp GAACTACAGCCTACGGGAACAAGAAGAGCGGGTAAAGGGAGACACTaGTGTCCACGTGTAGGGAAGGGCTTGAAGCTGTCTCAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: ELQPTGTRRAGKGRH*CPRVGKGLKLSQGR
Trigger: CCTGCCTTGAGACAGCTTCAAGCCCTTCCCTACACGTGGACATCAGTGTCTCCCTTTACCCGCTCTTCTTGTTCCCGTAGGCTGTAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440760.5
ENST00000484886.1
CDS TCA 90 bp AGTCAGCAATCCAAGGAAAGCGTCTACCATTACCTCTGTCCAGCCTaGCCCCTAGCCCCACACTTGAGCGACCTCTCTGCAGTAAGTCCT +
Preference number: 5 (lower is better)
Translates to: SQQSKESVYHYLCPA*PLAPHLSDLSAVSP
Trigger: AGGACTTACTGCAGAGAGGTCGCTCAAGTGTGGGGCTAGGGGTCAGGCTGGACAGAGGTAATGGTAGACGCTTTCCTTGGATTGCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493711.1
CDS-3UTR CAA 90 bp GGACACAGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACACGACGCAGGAAACTGTaGAAAGTCTCGCTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: GHRHRASFCKFLWGRGQTRRRKL*KVSLLP
Trigger: TGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCG...TGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCAAAACTGCTGTGTCTCCTGTaGTGCCCGACGCAGGAAACT +
Preference number: 5 (lower is better)
Translates to: DMVPPQGRQPWSLRLCAKLLCLL*CPTQET
Trigger: AGTTTCCTGCGTCGGGCACAACAGGAGACACAGCAG...TTTTGCACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp TCTGAAGTTAGCACGTTGACCAGAACTTTCTGCCCGTTGCTGAGCAGCACTTCCCTGCTGTGTCTCCTGTaGTGCCCGACGCAGGAAACT +
Preference number: 5 (lower is better)
Translates to: SEVSTLTRTFCPLLSSTSLLCLL*CPTQET
Trigger: AGTTTCCTGCGTCGGGCACAACAGGAGACACAGCAG...GGAAGTGCTGCTCAGCAACGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR CAA 90 bp ATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATGGTTCCTCCCCAAGGAGGCAGCTCAAACTCTaGCAACTTCCGTACAAAAGA +
Preference number: 5 (lower is better)
Translates to: MAPRGQKRPRGRYGSSPRRQLKL*QLPYKR
Trigger: TCTTTTGTACGGAAGTTGCAAGAGTTTGAGCTGCCT...CCTTGGGGAGGAACCATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp AATCCTCTGTGCAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTCTTGGAGACTTTCTCTaGCAGAGATTTGAGTTGCCG +
Preference number: 5 (lower is better)
Translates to: NPLCSQPRGQGKVGYEAPLGDFL*QRFELP
Trigger: CGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAG...AGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTGCACAGAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp TGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAGCCAGCCTCAGGAACTCCTTCTaGGAGACTTTCTCTTGCAGA +
Preference number: 5 (lower is better)
Translates to: WHRGPALKREGAILCAASLRNSF*ETFSCR
Trigger: TCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGAG...GCTGGCTGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp AGTATCCAATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGAAGGCTGAGCTCACTGTaGCCCGCGCTCACCACCACA +
Preference number: 5 (lower is better)
Translates to: SIQSSHLEDPALQLQPPGRLSSL*PALTTT
Trigger: TGTGGTGGTGAGCGCGGGCAACAGTGAGCTCAGCCT...TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGATACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp GGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGCCATAGTGCCGCAGCGTCTAGCTTACTTGAGAGTTaGACCATAGACTCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: GSQPHRHQSASSHSAAASSLLES*TIDSRV
Trigger: CACCCGGGAGTCTATGGTCAAACTCTCAAGTAAGCT...AGACGCTGCGGCACTATGGCTACTTGCGCTTTGATGCCTGTGTGGCTGACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp CAGCCAGCCCAGGGGACAAGGAAAGGTAGGATACGAGGCCCCTGGCCAAGAGAAATACTAAATGCTAATTaGGCATCGAGGGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: QPAQGTRKGRIRGPWPREILNAN*ASRASS
Trigger: AGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT...TTCTCTTGGCCAGGGGCCTCGTATCCTACCTTTCCTTGTCCCCTGGGCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp CTTGGCCTTTGGCCCATGGCTCCAAGAGGCCAGAAGCGGCCCAGAGGGAGATATATACTAAATGCTAATTaGGCATCGAGGGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LGLWPMAPRGQKRPRGRYILNAN*ASRASS
Trigger: AGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT...ATATCTCCCTCTGGGCCGCTTCTGGCCTCTTGGAGCCATGGGCCAAAGGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp CTCCTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTTCCATCCCCTTGGCCTTaGGCCCATGGCTCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: LLLGDFLLQRFELPVLFLPSPWP*AHGSKR
Trigger: CCTCTTGGAGCCATGGGCCAAAGGCCAAGGGGATGG...AAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS GCA 90 bp GGTCCTTTCCTTAAATCTTGGTCCCACCCAAAGCCCTACCTGTTGTaGCCGACGCAGGAAACTGTTGAAAGTCTCGCTGCTCCCAAGCAA +
Preference number: 5 (lower is better)
Translates to: GPFLKSWSHPKPYLL*PTQETVESLAAPKQ
Trigger: TTGCTTGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCGGGCACAACAGGTAGGGCTTTGGGTGGGACCAAGATTTAAGGAAAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464279.5
CDS-3UTR CAA 90 bp GGACACAGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACACCCAAGCAATGGGTCTaGCCGAACAGCTTGCATGTA +
Preference number: 5 (lower is better)
Translates to: GHRHRASFCKFLWGRGQTPKQWV*PNSLHV
Trigger: TACATGCAAGCTGTTCGGCAAGACCCATTGCTTGGG...TGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR CAA 90 bp TCCAATGCCCTCGAAGGCGAAATTGCCGTGGACATCACTGGCACTGGCATCTGTTCTGAAGTTAGCACGTaGACCAGAACTTTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: SNALEGEIAVDITGTGICSEVST*TRTFCP
Trigger: CGGGCAGAAAGTTCTGGTCAACGTGCTAACTTCAGA...ACAGATGCCAGTGCCAGTGATGTCCACGGCAATTTCGCCTTCGAGGGCATTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp CACGCTCAATATCTGATACCGTCTGAGCATAAAGCAGGTTCAGGCCAACCCGGTCTGGAAGATCCAGCTTaGCAGCTACAGCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: HAQYLIPSEHKAGSGQPGLEDPA*QLQPPG
Trigger: TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAG...ACCGGGTTGGCCTGAACCTGCTTTATGCTCAGACGGTATCAGATATTGAGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427123.5
ENST00000440760.5
CDS-3UTR CAA 90 bp ATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGACATCCTCATGCCGGTGCTGTTCCTaGGTGACCAAGATCCACCCA +
Preference number: 5 (lower is better)
Translates to: IKSSGRSSFAATASRTSSCRCCS*VTKIHP
Trigger: TGGGTGGATCTTGGTCACCAAGGAACAGCACCGGCA...TGAGGATGTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp AGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGTTGCAGAGATTTGAGTaGCCGGTGCTGTTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: REIWFLPKAGSHGPLDFVLQRFE*PVLFLG
Trigger: ACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAA...CACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GAGGGAGATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTAGCTTACTTGAGAGTTaGACCATAGACTCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: EGDMVPPQGRQPWSLRLCSLLES*TIDSRV
Trigger: CACCCGGGAGTCTATGGTCAAACTCTCAAGTAAGCT...ACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp TTAAAGGGGAACTACAGCCTACGGGAACAAGAAGAGCGGGTAAAGGGAGACACTCGTGTAGGGAAGGGCTaGAAGCTGTCTCAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: LKGNYSLREQEERVKGDTRVGKG*KLSQGR
Trigger: CCTGCCTTGAGACAGCTTCAAGCCCTTCCCTACACG...AGTGTCTCCCTTTACCCGCTCTTCTTGTTCCCGTAGGCTGTAGTTCCCCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440760.5
CDS TCA 90 bp CCGGAAATGTCAGACAAGATAAACCAGGGCCCTACCCTGTGGCAGTaGTTAAAGGGGAACTACAGCCTACGGGAACAAGAAGAGCGGGTA +
Preference number: 5 (lower is better)
Translates to: PEMSDKINQGPTLWQ*LKGNYSLREQEERV
Trigger: TACCCGCTCTTCTTGTTCCCGTAGGCTGTAGTTCCCCTTTAATCACTGCCACAGGGTAGGGCCCTGGTTTATCTTGTCTGACATTTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484886.1
CDS-3UTR CAA 90 bp GTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGCAAGTAGCCATAGTGAGAACTTTCTGCCCGTaGCTGAGCAGCACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: VLFWEVSHTGIKAQVAIVRTFCP*LSSTSK
Trigger: CTTGGAAGTGCTGCTCAGCAACGGGCAGAAAGTTCT...CACTATGGCTACTTGCGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp AGTATCCAATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGATGCCGGTGCTGTTCCTaGGTGACCAAGATCCACCCA +
Preference number: 5 (lower is better)
Translates to: SIQSSHLEDPALQLQPPGCRCCS*VTKIHP
Trigger: TGGGTGGATCTTGGTCACCAAGGAACAGCACCGGCA...TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGATACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp TTTGGCCTTACCCTTAGCATAGTAGTCCATGCTGTGATGGGGGAAGCAGGGGCATTCTCTTGCAGAGATTaGAGTTGCCGGTGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: FGLTLSIVVHAVMGEAGAFSCRD*SCRCCS
Trigger: GGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAA...TGCCCCTGCTTCCCCCATCACAGCATGGACTACTATGCTAAGGGTAAGGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR CAA 90 bp CACCACCACAGGACAGTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGCACTGTAGCCGGTCCTaGCTCATGAGGTATTCAAAA +
Preference number: 5 (lower is better)
Translates to: HHHRTVLFWEVSHTGIKAHCSRS*LMRYSK
Trigger: TTTTGAATACCTCATGAGCAAGGACCGGCTACAGTG...CGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCTGTGGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp CACCACCACAGGACAGTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGAGGCAGCTCAAACTCTaGCAACTTCCGTACAAAAGA +
Preference number: 5 (lower is better)
Translates to: HHHRTVLFWEVSHTGIKARQLKL*QLPYKR
Trigger: TCTTTTGTACGGAAGTTGCAAGAGTTTGAGCTGCCT...CGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCTGTGGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp GGACACAGGCACAGGGCAAGTTTCTGTAAATTCCTCTGGGGTAGAGGGCAGACACACAATCTTATACTCTaGACTCCGAAGGCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: GHRHRASFCKFLWGRGQTHNLIL*TPKAGD
Trigger: GTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGTG...TGTCTGCCCTCTACCCCAGAGGAATTTACAGAAACTTGCCCTGTGCCTGTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp CTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCATTCTCTTGCAGAGATTaGAGTTGCCGGTGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: LIWHRGPALKREGAILCAFSCRD*SCRCCS
Trigger: GGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAA...TGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp ATCATGATAGCCTGGGGGCTAGTGATGGTGACCCACTGTAGCCGGTCCTTGCTCGAACTCACTCACTGTTaGCATAAATTCTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: IMIAWGLVMVTHCSRSLLELTHC*HKFFTC
Trigger: GCAGGTGAAGAATTTATGCAAACAGTGAGTGAGTTC...GAGCAAGGACCGGCTACAGTGGGTCACCATCACTAGCCCCCAGGCTATCATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427123.5
CDS TCA 90 bp AGCTCACCTGAGCATAAAGCAGGTTCAGGCCAACCCGGTTCTCCATaGCATCGTCATCATAGGCAGAGTCCCAATAACTCTTCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: SSPEHKAGSGQPGSP*HRHHRQSPNNSSLA
Trigger: TGCTAAGGAAGAGTTATTGGGACTCTGCCTATGATGACGATGTCATGGAGAACCGGGTTGGCCTGAACCTGCTTTATGCTCAGGTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493711.1
CDS-3UTR CAA 90 bp TGCAAAATACTAAATGCTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGCCTCACTCGCCATTTaGGGAGCCCTGCGATCCGAT +
Preference number: 5 (lower is better)
Translates to: CKILNANLASRASSEKRRASLAI*GALRSD
Trigger: ATCGGATCGCAGGGCTCCCAAAATGGCGAGTGAGGC...CCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTATTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233575.7
ENST00000440760.5
ENST00000537606.5
CDS-3UTR CAA 90 bp ATACTAAATGCTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCTGCTGTGTCTCCTGTaGTGCCCGACGCAGGAAACT +
Preference number: 5 (lower is better)
Translates to: ILNANLASRASSEKRRGNLLCLL*CPTQET
Trigger: AGTTTCCTGCGTCGGGCACAACAGGAGACACAGCAG...ATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp CTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCACACAATCTTATACTCTaGACTCCGAAGGCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: LIWHRGPALKREGAILCAHNLIL*TPKAGD
Trigger: GTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGTG...TGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp ATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGACATCCTCATTCTCTTGCAGAGATTaGAGTTGCCGGTGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: IKSSGRSSFAATASRTSSFSCRD*SCRCCS
Trigger: GGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAA...TGAGGATGTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp AATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGACATCCTCTTCTCTTGCAGAGATTaGAGTTGCCGGTGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: NQVIWKIQLCSYSLQDILFSCRD*SCRCCS
Trigger: GGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAA...GAGGATGTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp CACAGGACAGTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGCAAGTACTTGGAGACTTTCTCTaGCAGAGATTTGAGTTGCCG +
Preference number: 5 (lower is better)
Translates to: HRTVLFWEVSHTGIKAQVLGDFL*QRFELP
Trigger: CGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAG...TACTTGCGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp CACAGGACAGTCCTTTTCTGGGAAGTCAGCCACACAGGCATCAAAGCGCAAGTACTCAGGAACTCCTTCTaGGAGACTTTCTCTTGCAGA +
Preference number: 5 (lower is better)
Translates to: HRTVLFWEVSHTGIKAQVLRNSF*ETFSCR
Trigger: TCTGCAAGAGAAAGTCTCCAAGAAGGAGTTCCTGAG...TACTTGCGCTTTGATGCCTGTGTGGCTGACTTCCCAGAAAAGGACTGTCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp ATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGACATCCTCAAGCTTACTTGAGAGTTaGACCATAGACTCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: IKSSGRSSFAATASRTSSSLLES*TIDSRV
Trigger: CACCCGGGAGTCTATGGTCAAACTCTCAAGTAAGCT...TGAGGATGTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp CTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATCCTCTGTGCAAGGCAGCTCAAACTCTaGCAACTTCCGTACAAAAGA +
Preference number: 5 (lower is better)
Translates to: LIWHRGPALKREGAILCARQLKL*QLPYKR
Trigger: TCTTTTGTACGGAAGTTGCAAGAGTTTGAGCTGCCT...TGCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp GATATGGTTCCTCCCCAAGGCAGGCAGCCATGGTCCCTTAGACTTTGTGCAAAACATGTCTATGCTGAATaGGCAATGGCAGGCAATTTG +
Preference number: 5 (lower is better)
Translates to: DMVPPQGRQPWSLRLCAKHVYAE*AMAGNL
Trigger: CAAATTGCCTGCCATTGCCAATTCAGCATAGACATG...TTTTGCACAAAGTCTAAGGGACCATGGCTGCCTGCCTTGGGGAGGAACCATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000233575.7
ENST00000537606.5
CDS-3UTR CAA 90 bp ATACTAAATGCTAATTTGGCATCGAGGGCCAGCTCTGAAAAGAGAAGGGGCAATAGAACTTTCTGCCCGTaGCTGAGCAGCACTTCCAAG +
Preference number: 5 (lower is better)
Translates to: ILNANLASRASSEKRRGNRTFCP*LSSTSK
Trigger: CTTGGAAGTGCTGCTCAGCAACGGGCAGAAAGTTCT...ATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000537606.5
CDS-3UTR CAA 90 bp CTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTTGGTCACAATCTTATACTCTaGACTCCGAAGGCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: LLGDFLLQRFELPVLFLGHNLIL*TPKAGD
Trigger: GTCACCAGCCTTCGGAGTCAAGAGTATAAGATTGTG...ACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp AGTATCCAATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGACTTGGAGACTTTCTCTaGCAGAGATTTGAGTTGCCG +
Preference number: 5 (lower is better)
Translates to: SIQSSHLEDPALQLQPPGLGDFL*QRFELP
Trigger: CGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAG...TCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATTGGATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp AATCAAGTCATCTGGAAGATCCAGCTTTGCAGCTACAGCCTCCAGGACATCCTCATACTAAATGCTAATTaGGCATCGAGGGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: NQVIWKIQLCSYSLQDILILNAN*ASRASS
Trigger: AGAGCTGGCCCTCGATGCCAAATTAGCATTTAGTAT...GAGGATGTCCTGGAGGCTGTAGCTGCAAAGCTGGATCTTCCAGATGACTTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS GCA 90 bp GACTGGACAGAAAACCAGAATATAAGAACAGGAAGGAGCAGTTGTTaGGCGGACATTAAGCTTCTTAGGGAGTTCCCGGAAATGTCAGAC +
Preference number: 5 (lower is better)
Translates to: DWTENQNIRTGRSSC*ADIKLLREFPEMSD
Trigger: GTCTGACATTTCCGGGAACTCCCTAAGAAGCTTAATGTCCGCGCAACAACTGCTCCTTCCTGTTCTTATATTCTGGTTTTCTGTCCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484886.1
CDS-3UTR CAA 90 bp CTTCTTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTTGGTAGGCAGCTCAAACTCTaGCAACTTCCGTACAAAAGA +
Preference number: 5 (lower is better)
Translates to: LLGDFLLQRFELPVLFLGRQLKL*QLPYKR
Trigger: TCTTTTGTACGGAAGTTGCAAGAGTTTGAGCTGCCT...ACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS GCA 90 bp TTTAAGTCTCTCCCCATAGTCCTCAATATAGTCAACCTAGTTTCCTaGAACCACTCACCAGCTTGCATGTACTTCTCTAACTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: FKSLPIVLNIVNLVS*NHSPACMYFSNCSL
Trigger: GAGAGAGCAGTTAGAGAAGTACATGCAAGCTGGTGAGTGGTTGCAGGAAACTAGGTTGACTATATTGAGGACTATGGGGAGAGACTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489402.1
CDS-3UTR CAA 90 bp GAAAAGGCTCCATCCTCTTTTTCTCGAACTAAGAATAGACTAAAGTATCCAATCTTCTCTTGCAGAGATTaGAGTTGCCGGTGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: EKAPSSFSRTKNRLKYPIFSCRD*SCRCCS
Trigger: GGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAA...GATTGGATACTTTAGTCTATTCTTAGTTCGAGAAAAAGAGGATGGAGCCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS-3UTR CAA 90 bp AAAGAAAAGGCTCCATCCTCTTTTTCTCGAACTAAGAATAGACTAAAGTATCCAAGCTTACTTGAGAGTTaGACCATAGACTCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: KEKAPSSFSRTKNRLKYPSLLES*TIDSRV
Trigger: CACCCGGGAGTCTATGGTCAAACTCTCAAGTAAGCT...TGGATACTTTAGTCTATTCTTAGTTCGAGAAAAAGAGGATGGAGCCTTTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
CDS CAA 90 bp TCCCCCTCCGCTGCTCAGCGAGTCCCCGCAGCCTCACTCGCCATTTaGGGAGCCCTGCGATCCGATGTGGGAAGGCGGTGGGACGTCGGT +
Preference number: 6 (lower is better)
Translates to: SPSAAQRVPAASLAI*GALRSDVGRRWDVG
Trigger: ACCGACGTCCCACCGCCTTCCCACATCGGATCGCAGGGCTCCCAAAATGGCGAGTGAGGCTGCGGGGACTCGCTGAGCAGCGGAGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537606.5
CDS GCA 72 bp TCCCCGCTGCGGGACTCGGTTTCGGGAATGGAAAAGTaGATGTTCCCTACGGCACGGCACGGCCGGGCTCCG +
Preference number: 6 (lower is better)
Translates to: SPLRDSVSGMEK*MFPTARHGRAP
Trigger: CGGAGCCCGGCCGTGCCGTGCCGTAGGGAACATGCACTTTTCCATTCCCGAAACCGAGTCCCGCAGCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000464279.5
ENST00000484886.1
ENST00000489402.1
ENST00000494893.5
ENST00000537606.5
CDS CCA 72 bp CGCCGCTGTCCCCGCTGCGGGACTCGGTTTCGGGAATaGAAAAGTGCATGTTCCCTACGGCACGGCACGGCC +
Preference number: 6 (lower is better)
Translates to: RRCPRCGTRFRE*KSACSLRHGTA
Trigger: GGCCGTGCCGTGCCGTAGGGAACATGCACTTTTCCATTCCCGAAACCGAGTCCCGCAGCGGGGACAGCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000233575.7
ENST00000427123.5
ENST00000440760.5
ENST00000453453.1
ENST00000464279.5
ENST00000484886.1
ENST00000489402.1
ENST00000494893.5
ENST00000537606.5
CDS CAA 72 bp GCTGCTCAGCGAGTCCCCGCAGCCTCACTCGCCATTTaGGGAGCCCTGCGATCCGATGTGGGAAGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: AAQRVPAASLAI*GALRSDVGRRW
Trigger: CCACCGCCTTCCCACATCGGATCGCAGGGCTCCCAAAATGGCGAGTGAGGCTGCGGGGACTCGCTGAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537606.5
CDS GCA 72 bp GAGTCCCCGCAGCCTCACTCGCCATTTTGGGAGCCCTaGGATCCGATGTGGGAAGGCGGTGGGACGTCGGTT +
Preference number: 6 (lower is better)
Translates to: ESPQPHSPFWEP*DPMWEGGGTSV
Trigger: AACCGACGTCCCACCGCCTTCCCACATCGGATCGCAGGGCTCCCAAAATGGCGAGTGAGGCTGCGGGGACTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537606.5
CDS CCA 72 bp ATTTTGGGAGCCCTGCGATCCGATGTGGGAAGGCGGTaGGACGTCGGTTCTGGGACGCAATCGCCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: ILGALRSDVGRR*DVGSGTQSPGH
Trigger: ATGCCCAGGCGATTGCGTCCCAGAACCGACGTCCCACCGCCTTCCCACATCGGATCGCAGGGCTCCCAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537606.5
CDS CCA 72 bp CCTCACTCGCCATTTTGGGAGCCCTGCGATCCGATGTaGGAAGGCGGTGGGACGTCGGTTCTGGGACGCAAT +
Preference number: 6 (lower is better)
Translates to: PHSPFWEPCDPM*EGGGTSVLGRN
Trigger: ATTGCGTCCCAGAACCGACGTCCCACCGCCTTCCCACATCGGATCGCAGGGCTCCCAAAATGGCGAGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537606.5
CDS CAA 90 bp GGTCCCACCCAAAGCCCTACCTGTTGTGCCCGACGCAGGAAACTGTaGAAAGTCTCGCTGCTCCCAAGCAATGGGTCTTGCCGAACAGCT +
Preference number: 6 (lower is better)
Translates to: GPTQSPTCCARRRKL*KVSLLPSNGSCRTA
Trigger: AGCTGTTCGGCAAGACCCATTGCTTGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCGGGCACAACAGGTAGGGCTTTGGGTGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464279.5
CDS CCA 72 bp CAGGAAACTGTTGAAAGTCTCGCTGCTCCCAAGCAATaGGTCTTGCCGAACTGCTCGTGCAGCCCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: QETVESLAAPKQ*VLPNCSCSPRS
Trigger: GCTCCTGGGGCTGCACGAGCAGTTCGGCAAGACCCATTGCTTGGGAGCAGCGAGACTTTCAACAGTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494893.5
CDS TCA 72 bp TCCAAGGAAAGCGTCTACCATTACCTCTGTCCAGCCTaGCCCCTAGCCCCACACTTGAGCGACCTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: SKESVYHYLCPA*PLAPHLSDLSA
Trigger: TGCAGAGAGGTCGCTCAAGTGTGGGGCTAGGGGTCAGGCTGGACAGAGGTAATGGTAGACGCTTTCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493711.1
CDS TCA 72 bp AAAGCCCTACCTGTTGTGCCCGACGCAGGAAACTGTTaGAAGTCTCGCTGCTCCCAAGCAATGGGTCTTGCC +
Preference number: 6 (lower is better)
Translates to: KALPVVPDAGNC*KSRCSQAMGLA
Trigger: GGCAAGACCCATTGCTTGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCGGGCACAACAGGTAGGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464279.5
CDS CAA 72 bp CAAAGCCCTACCTGTTGTGCCCGACGCAGGAAACTGTaGAAAGTCTCGCTGCTCCCAAGCAATGGGTCTTGC +
Preference number: 6 (lower is better)
Translates to: QSPTCCARRRKL*KVSLLPSNGSC
Trigger: GCAAGACCCATTGCTTGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCGGGCACAACAGGTAGGGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464279.5
CDS TCA 72 bp CCTACGGGAACAAGAAGAGCGGGTAAAGGGAGACACTaGTGTCCACGTGTAGGGAAGGGCTTGAAGCTGTCT +
Preference number: 6 (lower is better)
Translates to: PTGTRRAGKGRH*CPRVGKGLKLS
Trigger: AGACAGCTTCAAGCCCTTCCCTACACGTGGACATCAGTGTCTCCCTTTACCCGCTCTTCTTGTTCCCGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440760.5
ENST00000484886.1
CDS CAA 90 bp CAAGGTCCTTTCCTTAAATCTTGGTCCCACCCAAAGCCCTACCTGTaGTGCCCGACGCAGGAAACTGTTGAAAGTCTCGCTGCTCCCAAG +
Preference number: 6 (lower is better)
Translates to: QGPFLKSWSHPKPYL*CPTQETVESLAAPK
Trigger: CTTGGGAGCAGCGAGACTTTCAACAGTTTCCTGCGTCGGGCACAACAGGTAGGGCTTTGGGTGGGACCAAGATTTAAGGAAAGGACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464279.5
CDS GCA 72 bp CTTAAATCTTGGTCCCACCCAAAGCCCTACCTGTTGTaGCCGACGCAGGAAACTGTTGAAAGTCTCGCTGCT +
Preference number: 6 (lower is better)
Translates to: LKSWSHPKPYLL*PTQETVESLAA
Trigger: AGCAGCGAGACTTTCAACAGTTTCCTGCGTCGGGCACAACAGGTAGGGCTTTGGGTGGGACCAAGATTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464279.5
CDS GCA 72 bp CCTCACCTCACTCACTGTTTGCATAAATTCTTCACCTaGCCCACCCTTGGCTGCCATCTAGGTGAGTCCAGT +
Preference number: 6 (lower is better)
Translates to: PHLTHCLHKFFT*PTLGCHLGESS
Trigger: ACTGGACTCACCTAGATGGCAGCCAAGGGTGGGGCAGGTGAAGAATTTATGCAAACAGTGAGTGAGGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489402.1
CDS CAA 72 bp TTCCTTAAATCTTGGTCCCACCCAAAGCCCTACCTGTaGTGCCCGACGCAGGAAACTGTTGAAAGTCTCGCT +
Preference number: 6 (lower is better)
Translates to: FLKSWSHPKPYL*CPTQETVESLA
Trigger: AGCGAGACTTTCAACAGTTTCCTGCGTCGGGCACAACAGGTAGGGCTTTGGGTGGGACCAAGATTTAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464279.5
CDS TCA 72 bp ATTCTTCACCTGCCCCACCCTTGGCTGCCATCTAGGTaGGTCCAGTCTATAGAACAGCTTGCATGTACTTCT +
Preference number: 6 (lower is better)
Translates to: ILHLPHPWLPSR*VQSIEQLACTS
Trigger: AGAAGTACATGCAAGCTGTTCTATAGACTGGACTCACCTAGATGGCAGCCAAGGGTGGGGCAGGTGAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427123.5
CDS TCA 72 bp TCAGACAAGATAAACCAGGGCCCTACCCTGTGGCAGTaGTTAAAGGGGAACTACAGCCTACGGGAACAAGAA +
Preference number: 6 (lower is better)
Translates to: SDKINQGPTLWQ*LKGNYSLREQE
Trigger: TTCTTGTTCCCGTAGGCTGTAGTTCCCCTTTAATCACTGCCACAGGGTAGGGCCCTGGTTTATCTTGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484886.1
CDS CAA 90 bp TTGGAGACTTTCTCTTGCAGAGATTTGAGTTGCCGGTGCTGTTCCTaGGTGACCAAGATCCACCCACGCTCAATATCTGATACCGTCTAT +
Preference number: 6 (lower is better)
Translates to: LETFSCRDLSCRCCS*VTKIHPRSISDTVY
Trigger: ATAGACGGTATCAGATATTGAGCGTGGGTGGATCTTGGTCACCAAGGAACAGCACCGGCAACTCAAATCTCTGCAAGAGAAAGTCTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493711.1
CDS TCA 72 bp GCCCCACACTTGAGCGACCTCTCTGCAGTAAGTCCTTaGTCTTGTCAGCTTAATAAAAGTAGGGAGAGTAGA +
Preference number: 6 (lower is better)
Translates to: APHLSDLSAVSP*SCQLNKSRESR
Trigger: TCTACTCTCCCTACTTTTATTAAGCTGACAAGATCAAGGACTTACTGCAGAGAGGTCGCTCAAGTGTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493711.1
CDS GCA 72 bp GAAAACCAGAATATAAGAACAGGAAGGAGCAGTTGTTaGGCGGACATTAAGCTTCTTAGGGAGTTCCCGGAA +
Preference number: 6 (lower is better)
Translates to: ENQNIRTGRSSC*ADIKLLREFPE
Trigger: TTCCGGGAACTCCCTAAGAAGCTTAATGTCCGCGCAACAACTGCTCCTTCCTGTTCTTATATTCTGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484886.1
CDS CAA 72 bp CTAGTATTTCTCATAGATGTTAGTGCCCAAATTGTTTaGCTAGTACACAGAGTTACACATCCTCGTACACTA +
Preference number: 6 (lower is better)
Translates to: LVFLIDVSAQIV*LVHRVTHPRTL
Trigger: TAGTGTACGAGGATGTGTAACTCTGTGTACTAGCAAAACAATTTGGGCACTAACATCTATGAGAAATACTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489402.1