RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNX13 (Homo sapiens)

Ensembl gene IDs: ENSG00000071189

Ensembl transcript IDs: ENST00000409076.6, ENST00000409604.1, ENST00000428135.7, ENST00000444712.5, ENST00000471744.1, ENST00000474067.5, ENST00000475800.5, ENST00000482558.5, ENST00000492626.5, ENST00000494402.5, ENST00000496855.1, ENST00000498463.5, ENST00000611725.4

Found 565 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCTGCCCCCTCTTCACTTAGCTGTATCCTCTCCAACTGTGAGCTaGAGTAGGCAAACAATTGTGTACATCTCTTCCTATTTCCATGTT +
Preference number: 1 (lower is better)
Translates to: PLPPLHLAVSSPTVS*SRQTIVYISSYFHV
Trigger: AACATGGAAATAGGAAGAGATGTACACAATTGTTTGCCTACTCCAGCTCACAGTTGGAGAGGATACAGCTAAGTGAAGAGGGGGCAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR TCA 90 bp AGGTTTTCCACATCTCCTCACTGTTTAGGTTGCGCCGGTGTACAGTaGTGGCATATAATGCATATGTCTTGCCATGATCATTACAAACGC +
Preference number: 1 (lower is better)
Translates to: RFSTSPHCLGCAGVQ*WHIMHMSCHDHYKR
Trigger: GCGTTTGTAATGATCATGGCAAGACATATGCATTATATGCCATCACTGTACACCGGCGCAACCTAAACAGTGAGGAGATGTGGAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR CCA 90 bp CCTTTTTCAGGGTCGGAGCACTGTTTACAATGGGTGTTTGGACAATaGCAACAGGAGGCACAAACAACAATTGCTTCCTTACTCCTTAAA +
Preference number: 1 (lower is better)
Translates to: PFSGSEHCLQWVFGQ*QQEAQTTIASLLLK
Trigger: TTTAAGGAGTAAGGAAGCAATTGTTGTTTGTGCCTCCTGTTGCCATTGTCCAAACACCCATTGTAAACAGTGCTCCGACCCTGAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR CCA 90 bp ATTGATTCCTTTTTCAGGGTCGGAGCACTGTTTACAATGGGTGTTTaGACAATGGCAACAGGAGGCACAAACAACAATTGCTTCCTTACT +
Preference number: 1 (lower is better)
Translates to: IDSFFRVGALFTMGV*TMATGGTNNNCFLT
Trigger: AGTAAGGAAGCAATTGTTGTTTGTGCCTCCTGTTGCCATTGTCCAAACACCCATTGTAAACAGTGCTCCGACCCTGAAAAAGGAATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR CCA 90 bp CCTCGTGCAAGGATTTCCCTGACAAAGTATCGCATGATCTTGTTCTaGAAATCTCCAGGAGGTAGCAATAAATATAGTAAGACCTCACAC +
Preference number: 1 (lower is better)
Translates to: PRARISLTKYRMILF*KSPGGSNKYSKTSH
Trigger: GTGTGAGGTCTTACTATATTTATTGCTACCTCCTGGAGATTTCCAGAACAAGATCATGCGATACTTTGTCAGGGAAATCCTTGCACGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR CCA 90 bp ATTGATTTATTGATTCCTTTTTCAGGGTCGGAGCACTGTTTACAATaGGTGTTTGGACAATGGCAACAGGAGGCACAAACAACAATTGCT +
Preference number: 1 (lower is better)
Translates to: IDLLIPFSGSEHCLQ*VFGQWQQEAQTTIA
Trigger: AGCAATTGTTGTTTGTGCCTCCTGTTGCCATTGTCCAAACACCCATTGTAAACAGTGCTCCGACCCTGAAAAAGGAATCAATAAATCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR CCA 90 bp GCTTTCCTTAGCTTTCATATATACACTCTGGCACTTTGTCATTGCTaGAGAATGCTGATTAGTTTGAAATGGAAGAAACCAACGCCATTC +
Preference number: 1 (lower is better)
Translates to: AFLSFHIYTLALCHC*RMLISLKWKKPTPF
Trigger: GAATGGCGTTGGTTTCTTCCATTTCAAACTAATCAGCATTCTCCAGCAATGACAAAGTGCCAGAGTGTATATATGAAAGCTAAGGAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
3UTR TCA 90 bp CATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTaGAGACTTTCAAATTTCATAGCTGCCTTTCGCTCACTTAATTCA +
Preference number: 1 (lower is better)
Translates to: HGNKDICEQICMQSP*RLSNFIAAFRSLNS
Trigger: TGAATTAAGTGAGCGAAAGGCAGCTATGAAATTTGAAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR TCA 90 bp AGTGTGATGGAGTATGTTAGTGTGTGTTTTGGGAGGAAACATGATTaGAAAGAAATCAAGATTAGTAACAACCTGACCAGAGAATCTTAC +
Preference number: 1 (lower is better)
Translates to: SVMEYVSVCFGRKHD*KEIKISNNLTRESY
Trigger: GTAAGATTCTCTGGTCAGGTTGTTACTAATCTTGATTTCTTTTCAATCATGTTTCCTCCCAAAACACACACTAACATACTCCATCACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR GCA 90 bp TATTGTCATCCACATTATCGTCAAGTTGAGCCGAAACTCGGCGATGTTCAGGGTCATTGTCTACAAGAATaGTGTCCAGGGGGACTGTGC +
Preference number: 2 (lower is better)
Translates to: YCHPHYRQVEPKLGDVQGHCLQE*CPGGLC
Trigger: GCACAGTCCCCCTGGACAGCATTCTTGTAGACAATG...ACCCTGAACATCGCCGAGTTTCGGCTCAACTTGACGATAATGTGGATGACAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR GCA 90 bp AACGACGATAGGTTTTCCACATCTCCTCACTGTTTAGGTTGCGCCGGTGTACAGCATGCGCACATAAAGTaGATTCTGTCTGAAGGAAGG +
Preference number: 2 (lower is better)
Translates to: NDDRFSTSPHCLGCAGVQHAHIK*ILSEGR
Trigger: CCTTCCTTCAGACAGAATGCACTTTATGTGCGCATG...CTGTACACCGGCGCAACCTAAACAGTGAGGAGATGTGGAAAACCTATCGTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR GCA 90 bp AATACCTTTCCGTGTTGTCTCAGCCCCAATAATGTGCTTCAGCTCATCTGGCATAATAAAACTTCTAGCTaGTGTTGGGCGGTAACCCGG +
Preference number: 2 (lower is better)
Translates to: NTFPCCLSPNNVLQLIWHNKTSS*CWAVTR
Trigger: CCGGGTTACCGCCCAACAGCAGCTAGAAGTTTTATT...ATGCCAGATGAGCTGAAGCACATTATTGGGGCTGAGACAACACGGAAAGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR TCA 90 bp ATTCAGGTCACACTACAGACTAATTGTATCAGATTTTCTGGAGGTGGGGTCCAGTATCCTCTCCAACTGTaGGCTGGAGTAGGCAAACAA +
Preference number: 2 (lower is better)
Translates to: IQVTLQTNCIRFSGGGVQYPLQL*AGVGKQ
Trigger: TTGTTTGCCTACTCCAGCTCACAGTTGGAGAGGATA...CTGGACCCCACCTCCAGAAAATCTGATACAATTAGTCTGTAGTGTGACCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR GCA 90 bp TGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGATTTCTTTGCCTGACTaGAATCGCTGTATTCTTGAG +
Preference number: 2 (lower is better)
Translates to: CCPGGLCKVSQSLLQVSQISLPD*NRCILE
Trigger: CTCAAGAATACAGCGATTGCAGTCAGGCAAAGAAAT...CTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR GCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTTGTCCAGGGGGACTGTaGAAAGTTTCCCAAAGTTTG +
Preference number: 2 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSCPGGL*KVSQSL
Trigger: CAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACA...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR GCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTAACCAACGCCATTCTTaGTTGAGATGGGGGCAGTTT +
Preference number: 2 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSNQRHS*LRWGQF
Trigger: AAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTT...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
3UTR-3UTR TCA 90 bp TCGGCTACTTGTTCAGGTGAAGTCATCCAGTCAACATGGTCAACTATTTTTCTACTGCTGCCTTATCTCTaGCTGCTTCTAGCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: SATCSGEVIQSTWSTIFLLLPYL*LLLALQ
Trigger: TTGGAGAGCTAGAAGCAGTCAGAGATAAGGCAGCAG...TAGAAAAATAGTTGACCATGTTGACTGGATGACTTCACCTGAACAAGTAGCCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR TCA 90 bp TGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGATTTATTTCTTTGCCTaGCTGCAATCGCTGTATTCT +
Preference number: 2 (lower is better)
Translates to: CCPGGLCKVSQSLLQVSQIYFFA*LQSLYS
Trigger: AGAATACAGCGATTGCAGTCAGGCAAAGAAATAAAT...CTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR TCA 90 bp CAAAATGCATCTCTGAAACGTTTCACTGAGTCGGCTACTTGTTCAGGTGAAGTCGCATATGTCTTGCCATaGTCATTACAAACGCCTGTG +
Preference number: 2 (lower is better)
Translates to: QNASLKRFTESATCSGEVAYVLP*SLQTPV
Trigger: CACAGGCGTTTGTAATGATCATGGCAAGACATATGC...GACTTCACCTGAACAAGTAGCCGACTCAGTGAAACGTTTCAGAGATGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAGGCTACTTGTTCAGGTaGAGTCATCCAGTCAACATG +
Preference number: 2 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKGYLFR*SHPVNM
Trigger: CATGTTGACTGGATGACTTCACCTGAACAAGTAGCC...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR TCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTTTTAAAGGTATACACTaGGGGGTCTTGCCTACTAGC +
Preference number: 2 (lower is better)
Translates to: GADTTVFELSPRRSVHTIFKGIH*GVLPTS
Trigger: GCTAGTAGGCAAGACCCCTCAGTGTATACCTTTAAA...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000428135.7
ENST00000611725.4
3UTR-3UTR TCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTCTTTATTTCCCTAATTaGTGGCCAGTGCTCCTCACA +
Preference number: 2 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSLYFPN*WPVLLT
Trigger: TGTGAGGAGCACTGGCCATCAATTAGGGAAATAAAG...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR-3UTR TCA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAATAGGTGCAATGAGATaGAGGATTAGCCTTGGTGAA +
Preference number: 2 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSAIGAMR*RISLGE
Trigger: TTCACCAAGGCTAATCCTTCATCTCATTGCACCTAT...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611725.4
3UTR-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAAACCAACGCCATTCTTaGTTGAGATGGGGGCAGTTT +
Preference number: 2 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKNQRHS*LRWGQF
Trigger: AAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
3UTR CAA 90 bp CTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTaGCTGCAAGTTTCACAGTATTTATTTCTTTGCCTGACTGCAATC +
Preference number: 2 (lower is better)
Translates to: LQECCPGGLCKVSQS*LQVSQYLFLCLTAI
Trigger: GATTGCAGTCAGGCAAAGAAATAAATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR CAA 90 bp ATATACACTCTGGCACTTTGTCATTGCTGGAGAATGCTGATTAGTTaGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCA +
Preference number: 2 (lower is better)
Translates to: IYTLALCHCWRMLIS*KWKKPTPFLLEMGA
Trigger: TGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAAACTAATCAGCATTCTCCAGCAATGACAAAGTGCCAGAGTGTATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
3UTR-3UTR TCA 90 bp CTCTTGGAGATGCCTTTTCTGATAAATACTGTTCATAAATTCCAACAGCAGCTGCTGCTGCCTTATCTCTaGCTGCTTCTAGCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: LLEMPFLINTVHKFQQQLLLPYL*LLLALQ
Trigger: TTGGAGAGCTAGAAGCAGTCAGAGATAAGGCAGCAG...CAGCTGCTGTTGGAATTTATGAACAGTATTTATCAGAAAAGGCATCTCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR TCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTAGACACAACAGTATTTaGGTTAAGCCCCAGAAGATC +
Preference number: 2 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSRHNSI*VKPQKI
Trigger: GATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCT...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
3UTR-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAGGCAGGGAGACACCCTaGGAAGAAGAAATACTATTT +
Preference number: 2 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKGRETP*EEEILF
Trigger: AAATAGTATTTCTTCTTCTCAGGGTGTCTCCCTGCC...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAGACCACAGCTCTTTCTaGTGTAAAAGACAGATGTGC +
Preference number: 2 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKDHSSF*CKRQMC
Trigger: GCACATCTGTCTTTTACATCAGAAAGAGCTGTGGTC...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR-3UTR GCA 90 bp CCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAACAAGCTCAGCTAACATaGGCACATAAAGTGCATTCT +
Preference number: 2 (lower is better)
Translates to: PGQNEHQLHRVECHLFCKQAQLT*AHKVHS
Trigger: AGAATGCACTTTATGTGCGCATGTTAGCTGAGCTTG...TTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR GCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTCTGGCACTTTGTCATTaGTGGAGAATGCTGATTAGT +
Preference number: 2 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSLALCH*WRMLIS
Trigger: ACTAATCAGCATTCTCCAGCAATGACAAAGTGCCAG...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
3UTR-3UTR CCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTAAGCTCCCAAATAACTaGGATACCAATACTCTGTCC +
Preference number: 2 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSKLPNN*DTNTLS
Trigger: GGACAGAGTATTGGTATCCCAGTTATTTGGGAGCTT...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR-3UTR TCA 90 bp ATTCAGGTCACACTACAGACTAATTGTATCAGATTTTCTGGAGGTGGGGTCCAGCTTAAAGTTAATGTATaGGTACCCCCTACCATAGTC +
Preference number: 2 (lower is better)
Translates to: IQVTLQTNCIRFSGGGVQLKVNV*VPPTIV
Trigger: GACTATGGTAGGGGGTACTCATACATTAACTTTAAG...CTGGACCCCACCTCCAGAAAATCTGATACAATTAGTCTGTAGTGTGACCTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR TCA 90 bp GGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGTATTTATTTTCTGTTGAGCCTTTCTaGATACTCGTAAGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: GGLCKVSQSLLQVSQYLFSVEPF*ILVSVC
Trigger: GCACACACTTACGAGTATTCAGAAAGGCTCAACAGA...AAATAAATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR TCA 90 bp ACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTCAATCGCTGTATTCTTaGGTCACATACCTTCTTTAC +
Preference number: 2 (lower is better)
Translates to: TLSTRMLSRGTVQSFPKFQSLYS*VTYLLY
Trigger: GTAAAGAAGGTATGTGACTCAAGAATACAGCGATTG...AAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR TCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTTCTCTAATTTTAGCATaGCCACAGCTCTTTCTGATG +
Preference number: 2 (lower is better)
Translates to: GADTTVFELSPRRSVHTISLILA*PQLFLM
Trigger: CATCAGAAAGAGCTGTGGTCATGCTAAAATTAGAGA...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR-3UTR GCA 90 bp ACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTATACTCGTAAGTGTGTaGCAAAGTCATCTACAATGC +
Preference number: 2 (lower is better)
Translates to: TLSTRMLSRGTVQSFPKFILVSV*QSHLQC
Trigger: GCATTGTAGATGACTTTGGCACACACTTACGAGTAT...AAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR GCA 90 bp GACTGCAATCGCTGTATTCTTGAGTCACATACCTTCTTTACGAATAGTAAGCTACATCTTTGGGGGAAGTaGACACTAGATCACGGCAAA +
Preference number: 2 (lower is better)
Translates to: DCNRCILESHTFFTNSKLHLWGK*TLDHGK
Trigger: TTTGCCGTGATCTAGTGTGCACTTCCCCCAAAGATG...TAGCTTACTATTCGTAAAGAAGGTATGTGACTCAAGAATACAGCGATTGCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTCCACATGCTTCTTTTTaGACAAAGAATGCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: GADTTVFELSPRRSVHTIPHASF*TKNAKR
Trigger: CCTTTTGGCATTCTTTGTGCAAAAAGAAGCATGTGG...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000428135.7
ENST00000611725.4
3UTR-3UTR GCA 90 bp CCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAAATGAGAGCCACCACATaGTTCTTTTTGCACAAAGAA +
Preference number: 2 (lower is better)
Translates to: PGQNEHQLHRVECHLFCKMRATT*FFLHKE
Trigger: TTCTTTGTGCAAAAAGAAGCATGTGGTGGCTCTCAT...TTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000611725.4
3UTR-3UTR GCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTGGGGAGACTTTCAGATaGGATAACAAAGAAAAGTTC +
Preference number: 2 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSGETFR*DNKEKF
Trigger: GAACTTTTCTTTGTTATCGCATCTGAAAGTCTCCCC...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000611725.4
3UTR-3UTR CCA 90 bp ATTCAGGTCACACTACAGACTAATTGTATCAGATTTTCTGGAGGTGGGGTCCAGATACAACTCCAAGGGTaGAAACAGAAGTGGATAGAT +
Preference number: 2 (lower is better)
Translates to: IQVTLQTNCIRFSGGGVQIQLQG*KQKWID
Trigger: ATCTATCCACTTCTGTTTCCACCCTTGGAGTTGTAT...CTGGACCCCACCTCCAGAAAATCTGATACAATTAGTCTGTAGTGTGACCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR CCA 90 bp TTCATATACCTTTCTTTGAATGTCATCAAAGATTTCAGGGGTTGGATCTTCATGACTTCTAGCTGCTGTTaGGCGGTAACCCGGTATCCT +
Preference number: 2 (lower is better)
Translates to: FIYLSLNVIKDFRGWIFMTSSCC*AVTRYP
Trigger: AGGATACCGGGTTACCGCCCAACAGCAGCTAGAAGT...CATGAAGATCCAACCCCTGAAATCTTTGATGACATTCAAAGAAAGGTATATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR CCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTACCAAGTGCATCCATTaGTCAATGGCACAATTGATT +
Preference number: 2 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSTKCIH*SMAQLI
Trigger: AATCAATTGTGCCATTGACCAATGGATGCACTTGGT...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR-3UTR CCA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAGCAAAGAACAGCACCTaGCACATAATAACTTTCAAT +
Preference number: 2 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSAAKNST*HIITFN
Trigger: ATTGAAAGTTATTATGTGCCAGGTGCTGTTCTTTGC...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611725.4
3UTR CAA 90 bp CTCAAGGAAAACTGGATAACTTGCTGGAGAGGTTCATCAATTATATaGGCACCCGTCAATCTTCTATCAATCTTAATAGTCCTGGCTTCC +
Preference number: 2 (lower is better)
Translates to: LKENWITCWRGSSII*APVNLLSILIVLAS
Trigger: GGAAGCCAGGACTATTAAGATTGATAGAAGATTGACGGGTGCCAATATAATTGATGAACCTCTCCAGCAAGTTATCCAGTTTTCCTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444712.5
3UTR-3UTR TCA 90 bp CCAACTGTGAGCTGGAGTAGGCAAACAATTGTGTACATCTCTTCCTATTTCCATTCAAAATGTGGAGTGTaGTGGAGTATGTTAGTGTGT +
Preference number: 2 (lower is better)
Translates to: PTVSWSRQTIVYISSYFHSKCGV*WSMLVC
Trigger: ACACACTAACATACTCCATCACACTCCACATTTTGA...ATGGAAATAGGAAGAGATGTACACAATTGTTTGCCTACTCCAGCTCACAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR TCA 90 bp ATTTTAGTCATTCCCTCTGCCAAGCTATCAGGAAGGGATTTAACTGCATTTGAAAAGAATAGATGTGCTTaGCCTCCAGTTTGCTGCATG +
Preference number: 2 (lower is better)
Translates to: ILVIPSAKLSGRDLTAFEKNRCA*PPVCCM
Trigger: CATGCAGCAAACTGGAGGTCAAGCACATCTATTCTT...TTCAAATGCAGTTAAATCCCTTCCTGATAGCTTGGCAGAGGGAATGACTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR TCA 90 bp TGCCATGATCATTACAAACGCCTGTGTCTGAAATGTAGGCATGAAGTTGTACTGGGCATGAAGTTGTACTaGGTCATCAGAAGAAACATT +
Preference number: 2 (lower is better)
Translates to: CHDHYKRLCLKCRHEVVLGMKLY*VIRRNI
Trigger: AATGTTTCTTCTGATGACTCAGTACAACTTCATGCC...CAGTACAACTTCATGCCTACATTTCAGACACAGGCGTTTGTAATGATCATGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAGGTCAATGGCACAATTaGTTTCAGCAACTATTTGGA +
Preference number: 2 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKGQWHN*FQQLFG
Trigger: TCCAAATAGTTGCTGAAATCAATTGTGCCATTGACC...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR-3UTR TCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTTGTTCTGTGTGTTTTTaGGTCTCTCTATTTCTACTG +
Preference number: 2 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSCSVCF*VSLFLL
Trigger: CAGTAGAAATAGAGAGACTCAAAAACACACAGAACA...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000611725.4
3UTR-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAATTCAGCTCATCTAAATaGAGTGGAGGAAAACACACA +
Preference number: 2 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKFSSSK*SGGKHT
Trigger: TGTGTGTTTTCCTCCACTTCATTTAGATGAGCTGAA...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
3UTR-3UTR GCA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTTCAGGTTTACAAATCTaGCTCTGCCCCCTCTTCACT +
Preference number: 2 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFSGLQI*LCPLFT
Trigger: AGTGAAGAGGGGGCAGAGGCAGATTTGTAAACCTGA...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR GCA 90 bp ACATTTGAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTACATTGTCTACAAGAATaGTGTCCAGGGGGACTGTGC +
Preference number: 2 (lower is better)
Translates to: TFERSSKDKFMLPVGDPLHCLQE*CPGGLC
Trigger: GCACAGTCCCCCTGGACAGCATTCTTGTAGACAATG...TAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTCAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAATACACTGAGGGGTCTTaGCTACTAGCTTTATTTTGT +
Preference number: 2 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKYTEGS*LLALFC
Trigger: ACAAAATAAAGCTAGTAGGCAAGACCCCTCAGTGTA...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428135.7
ENST00000611725.4
3UTR-3UTR CCA 90 bp TTCCATCCTTCAGAGTCCTTGAAGAACTACTTTGTTAACGGTGTCAAAAACTCATCTCCAACTGTGAGCTaGAGTAGGCAAACAATTGTG +
Preference number: 2 (lower is better)
Translates to: FHPSESLKNYFVNGVKNSSPTVS*SRQTIV
Trigger: CACAATTGTTTGCCTACTCCAGCTCACAGTTGGAGA...TGAGTTTTTGACACCGTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR CCA 90 bp GATCTTTTAACATGTCAAGCTCAGCTAACATGCGCACATAAAGTGCATTCTGTCATCCTTCTTCATCTTTaGGGGAAGTGCACACTAGAT +
Preference number: 2 (lower is better)
Translates to: DLLTCQAQLTCAHKVHSVILLHL*GKCTLD
Trigger: ATCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGAT...GACAGAATGCACTTTATGTGCGCATGTTAGCTGAGCTTGACATGTTAAAAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR CCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTCAGCATTACCCTAAGTaGAATATTGTCATCCACATT +
Preference number: 2 (lower is better)
Translates to: GADTTVFELSPRRSVHTIQHYPK*NIVIHI
Trigger: AATGTGGATGACAATATTCCACTTAGGGTAATGCTG...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR TCA 90 bp GACTGCAATCGCTGTATTCTTGAGTCACATACCTTCTTTACGAATAGTAAGCTACCAGTCTATTTCTTTTaGCCTTTCTGGACCTTAGCT +
Preference number: 2 (lower is better)
Translates to: DCNRCILESHTFFTNSKLPVYFF*PFWTLA
Trigger: AGCTAAGGTCCAGAAAGGTCAAAAGAAATAGACTGG...TAGCTTACTATTCGTAAAGAAGGTATGTGACTCAAGAATACAGCGATTGCAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR TCA 90 bp GAGAAGCAGCATTACCCTAAGTGGAATATTGTCATCCACATTATCGTCAAGTTGCAATCGCTGTATTCTTaGGTCACATACCTTCTTTAC +
Preference number: 2 (lower is better)
Translates to: EKQHYPKWNIVIHIIVKLQSLYS*VTYLLY
Trigger: GTAAAGAAGGTATGTGACTCAAGAATACAGCGATTG...CAACTTGACGATAATGTGGATGACAATATTCCACTTAGGGTAATGCTGCTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR GCA 90 bp GAGAAGCAGCATTACCCTAAGTGGAATATTGTCATCCACATTATCGTCAAGTTGATACTCGTAAGTGTGTaGCAAAGTCATCTACAATGC +
Preference number: 2 (lower is better)
Translates to: EKQHYPKWNIVIHIIVKLILVSV*QSHLQC
Trigger: GCATTGTAGATGACTTTGGCACACACTTACGAGTAT...CAACTTGACGATAATGTGGATGACAATATTCCACTTAGGGTAATGCTGCTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR GCA 90 bp GATCTAAGATACTGTAATTCTTCTGCTGCCTTATCTCTGACTGCTTCTAGCTCTAAGAAGAATTCCTCGTaGAAGGATTTCCCTGACAAA +
Preference number: 2 (lower is better)
Translates to: DLRYCNSSAALSLTASSSKKNSS*KDFPDK
Trigger: TTTGTCAGGGAAATCCTTGCACGAGGAATTCTTCTT...AGAGCTAGAAGCAGTCAGAGATAAGGCAGCAGAAGAATTACAGTATCTTAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR GCA 90 bp TGCCATGATCATTACAAACGCCTGTGTCTGAAATGTAGGCATGAAGTTGTACTGCAGTATTTATTTCTTTaGCTGACTGCAATCGCTGTA +
Preference number: 2 (lower is better)
Translates to: CHDHYKRLCLKCRHEVVLQYLFL*LTAIAV
Trigger: TACAGCGATTGCAGTCAGGCAAAGAAATAAATACTG...CAGTACAACTTCATGCCTACATTTCAGACACAGGCGTTTGTAATGATCATGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTTTAATTTGCTATTTCTaGAGTTACCTAAGGCATGTC +
Preference number: 2 (lower is better)
Translates to: GADTTVFELSPRRSVHTILICYF*SYLRHV
Trigger: GACATGCCTTAGGTAACTGCAGAAATAGCAAATTAA...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428135.7
ENST00000611725.4
3UTR-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAAGAACATATGAGAAATaGCTAGTACAGTGCCTGATA +
Preference number: 2 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKRTYEK*LVQCLI
Trigger: TATCAGGCACTGTACTAGGCATTTCTCATATGTTCT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
3UTR-3UTR CCA 90 bp ATTCAGGTCACACTACAGACTAATTGTATCAGATTTTCTGGAGGTGGGGTCCAGATGGTATTCAAAATGTaGAGTGTGATGGAGTATGTT +
Preference number: 2 (lower is better)
Translates to: IQVTLQTNCIRFSGGGVQMVFKM*SVMEYV
Trigger: AACATACTCCATCACACTCCACATTTTGAATACCAT...CTGGACCCCACCTCCAGAAAATCTGATACAATTAGTCTGTAGTGTGACCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR CCA 90 bp CAAAATGCATCTCTGAAACGTTTCACTGAGTCGGCTACTTGTTCAGGTGAAGTCAAAGATTTCAGGGGTTaGATCTTCATGATTCAAAGT +
Preference number: 2 (lower is better)
Translates to: QNASLKRFTESATCSGEVKDFRG*IFMIQS
Trigger: ACTTTGAATCATGAAGATCCAACCCCTGAAATCTTT...GACTTCACCTGAACAAGTAGCCGACTCAGTGAAACGTTTCAGAGATGCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR CCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAACTGATTAGTTTGAAATaGAAGAAACCAACGCCATTC +
Preference number: 2 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKLISLK*KKPTPF
Trigger: GAATGGCGTTGGTTTCTTCCATTTCAAACTAATCAG...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
3UTR CAA 90 bp CTATCAGGAAGGGATTTAACTGCATTTGAAACATTCCTCATTGAATaGCGAAGTGGATTTACAAAAGTGTCCATCTTGCGAGCAAAATCC +
Preference number: 2 (lower is better)
Translates to: LSGRDLTAFETFLIE*RSGFTKVSILRAKS
Trigger: GGATTTTGCTCGCAAGATGGACACTTTTGTAAATCCACTTCGCAATTCAATGAGGAATGTTTCAAATGCAGTTAAATCCCTTCCTGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR TCA 90 bp GAGAAGCAGCATTACCCTAAGTGGAATATTGTCATCCACATTATCGTCAAGTTGATTTATTTCTTTGCCTaGCTGCAATCGCTGTATTCT +
Preference number: 2 (lower is better)
Translates to: EKQHYPKWNIVIHIIVKLIYFFA*LQSLYS
Trigger: AGAATACAGCGATTGCAGTCAGGCAAAGAAATAAAT...CAACTTGACGATAATGTGGATGACAATATTCCACTTAGGGTAATGCTGCTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR TCA 90 bp GATCTAAGTGAAAACAAGACAGTGATATCTTGTTCCAATCTTAAAGCTCCCAAATTTAAAGGTATACACTaGGGGGTCTTGCCTACTAGC +
Preference number: 2 (lower is better)
Translates to: DLSENKTVISCSNLKAPKFKGIH*GVLPTS
Trigger: GCTAGTAGGCAAGACCCCTCAGTGTATACCTTTAAA...TTTGGGAGCTTTAAGATTGGAACAAGATATCACTGTCTTGTTTTCACTTAGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR-3UTR GCA 90 bp CTCTTGGAGATGCCTTTTCTGATAAATACTGTTCATAAATTCCAACAGCAGCTGAAGAAGAATTCCTCGTaGAAGGATTTCCCTGACAAA +
Preference number: 2 (lower is better)
Translates to: LLEMPFLINTVHKFQQQLKKNSS*KDFPDK
Trigger: TTTGTCAGGGAAATCCTTGCACGAGGAATTCTTCTT...CAGCTGCTGTTGGAATTTATGAACAGTATTTATCAGAAAAGGCATCTCCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR GCA 90 bp CTCTTGGAGATGCCTTTTCTGATAAATACTGTTCATAAATTCCAACAGCAGCTGATTTCTTTGCCTGACTaGAATCGCTGTATTCTTGAG +
Preference number: 2 (lower is better)
Translates to: LLEMPFLINTVHKFQQQLISLPD*NRCILE
Trigger: CTCAAGAATACAGCGATTGCAGTCAGGCAAAGAAAT...CAGCTGCTGTTGGAATTTATGAACAGTATTTATCAGAAAAGGCATCTCCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR GCA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGTACACTGAGGGGTCTTaGCTACTAGCTTTATTTTGT +
Preference number: 2 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQYTEGS*LLALFC
Trigger: ACAAAATAAAGCTAGTAGGCAAGACCCCTCAGTGTA...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611725.4
3UTR-3UTR CCA 90 bp ACATTTGAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTATCCCTCAAGGAAAACTaGATAACTTGCTGGAGAGGT +
Preference number: 2 (lower is better)
Translates to: TFERSSKDKFMLPVGDPLSLKEN*ITCWRG
Trigger: ACCTCTCCAGCAAGTTATCCAGTTTTCCTTGAGGGA...TAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTCAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444712.5
3UTR-3UTR TCA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTATCCTTCAGAGTCCTTaGAGAACTACTTTGTTAACG +
Preference number: 2 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFILQSP*RTTLLT
Trigger: CGTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGAT...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR CCA 90 bp GAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAAAAGATATCCTTCTTCATCTTTaGGGGAAGTGCACACTAGAT +
Preference number: 2 (lower is better)
Translates to: ERSSKDKFMLPVGDPLKDILLHL*GKCTLD
Trigger: ATCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGAT...ATCTTTTAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR TCA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTTATTTCCATGTTCAGTaGCTTCATGCTGATAGCTTA +
Preference number: 2 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFYFHVQ*LHADSL
Trigger: TAAGCTATCAGCATGAAGTCACTGAACATGGAAATA...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR TCA 90 bp CTTCAACTTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATGCTGTACCTTTCACTTaGTCATCTTTCTCTGTTATT +
Preference number: 2 (lower is better)
Translates to: LQLQRRYLQDLLLYLSLDAVPFT*SSFSVI
Trigger: AATAACAGAGAAAGATGATCAAGTGAAAGGTACAGC...ATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAAGTTGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR TCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAACTGATTAAGAACATATaGGAAATGCCTAGTACAGTG +
Preference number: 2 (lower is better)
Translates to: PERDVSRIIHLANPQYIKLIKNI*EMPSTV
Trigger: CACTGTACTAGGCATTTCTCATATGTTCTTAATCAG...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611725.4
3UTR-3UTR GCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATCTACAAGATCTTCTaGTGTACCTTTCACTTGATC +
Preference number: 2 (lower is better)
Translates to: PERDVSRIIHLANPQYIKIYKIF*CTFHLI
Trigger: GATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGAT...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR GCA 90 bp ACTCTTGTTCTCATTCGAATACTTTTATCTCTGCATGGAACAGCCTCTGCTAAAAAGTTTCCCAAAGTTTaGTGCAAGTTTCACAGTATT +
Preference number: 2 (lower is better)
Translates to: TLVLIRILLSLHGTASAKKFPKV*CKFHSI
Trigger: AATACTGTGAAACTTGCAGCAAACTTTGGGAAACTT...TTTAGCAGAGGCTGTTCCATGCAGAGATAAAAGTATTCGAATGAGAACAAGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR GCA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCATGAGAGCCACCACATaGTTCTTTTTGCACAAAGAA +
Preference number: 2 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRIMRATT*FFLHKE
Trigger: TTCTTTGTGCAAAAAGAAGCATGTGGTGGCTCTCAT...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR-3UTR GCA 90 bp CTTCAACTTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATGAAAACTGGATAACTTaGTGGAGAGGTTCATCAATT +
Preference number: 2 (lower is better)
Translates to: LQLQRRYLQDLLLYLSLDENWIT*WRGSSI
Trigger: AATTGATGAACCTCTCCAGCAAGTTATCCAGTTTTC...ATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAAGTTGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444712.5
3UTR CAA 90 bp GAAATACTATTTCTTCCACCAGAGCCACTAAGGATCTTTTCTCACTaGCAAGTTGCAATGAAAGGGATTTCATTTTATGTAATTCTGAAG +
Preference number: 2 (lower is better)
Translates to: EILFLPPEPLRIFSH*QVAMKGISFYVILK
Trigger: CTTCAGAATTACATAAAATGAAATCCCTTTCATTGCAACTTGCAAGTGAGAAAAGATCCTTAGTGGCTCTGGTGGAAGAAATAGTATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR-3UTR TCA 90 bp TTCATATACCTTTCTTTGAATGTCATCAAAGATTTCAGGGGTTGGATCTTCATGGCTGTACCTTTCACTTaGTCATCTTTCTCTGTTATT +
Preference number: 2 (lower is better)
Translates to: FIYLSLNVIKDFRGWIFMAVPFT*SSFSVI
Trigger: AATAACAGAGAAAGATGATCAAGTGAAAGGTACAGC...CATGAAGATCCAACCCCTGAAATCTTTGATGACATTCAAAGAAAGGTATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR CAA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTTCCTCACTGTTTAGGTaGCGCCGGTGTACAGTGATG +
Preference number: 3 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSSSLFR*RRCTVM
Trigger: CATCACTGTACACCGGCGCAACCTAAACAGTGAGGA...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR CCA 72 bp GGGTCGGAGCACTGTTTACAATGGGTGTTTGGACAATaGCAACAGGAGGCACAAACAACAATTGCTTCCTTA +
Preference number: 3 (lower is better)
Translates to: GSEHCLQWVFGQ*QQEAQTTIASL
Trigger: TAAGGAAGCAATTGTTGTTTGTGCCTCCTGTTGCCATTGTCCAAACACCCATTGTAAACAGTGCTCCGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR CAA 90 bp TGCAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAAATCCTTCTTCATCTTaGGGGGAAGTGCACACTAGA +
Preference number: 3 (lower is better)
Translates to: CNIVYKNAVQGDCAKFPKNPSSS*GEVHTR
Trigger: TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATT...TTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR GCA 72 bp AATCCCTTAGGAATCCTTCTTCATCTTTGGGGGAAGTaGACACTAGATCACGGCAAACCTCCTTCTCCATTT +
Preference number: 3 (lower is better)
Translates to: NPLGILLHLWGK*TLDHGKPPSPF
Trigger: AAATGGAGAAGGAGGTTTGCCGTGATCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATTCCTAAGGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR CCA 72 bp TTTTTCAGGGTCGGAGCACTGTTTACAATGGGTGTTTaGACAATGGCAACAGGAGGCACAAACAACAATTGC +
Preference number: 3 (lower is better)
Translates to: FFRVGALFTMGV*TMATGGTNNNC
Trigger: GCAATTGTTGTTTGTGCCTCCTGTTGCCATTGTCCAAACACCCATTGTAAACAGTGCTCCGACCCTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR CCA 72 bp TTGATTCCTTTTTCAGGGTCGGAGCACTGTTTACAATaGGTGTTTGGACAATGGCAACAGGAGGCACAAACA +
Preference number: 3 (lower is better)
Translates to: LIPFSGSEHCLQ*VFGQWQQEAQT
Trigger: TGTTTGTGCCTCCTGTTGCCATTGTCCAAACACCCATTGTAAACAGTGCTCCGACCCTGAAAAAGGAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR CCA 72 bp TTAGTCCTGGACAAAATGAACACCAGCTTCATAGAGTaGAGTGTCACCTTTTCTGCAAAGAAGGCGCTTGAG +
Preference number: 3 (lower is better)
Translates to: LVLDKMNTSFIE*SVTFSAKKALE
Trigger: CTCAAGCGCCTTCTTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
3UTR-3UTR CAA 90 bp ACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTAATCCTTCTTCATCTTaGGGGGAAGTGCACACTAGA +
Preference number: 3 (lower is better)
Translates to: TLSTRMLSRGTVQSFPKFNPSSS*GEVHTR
Trigger: TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATT...AAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR CAA 90 bp TGCAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAAAGTATCGCATGATCTaGTTCTGGAAATCTCCAGGA +
Preference number: 3 (lower is better)
Translates to: CNIVYKNAVQGDCAKFPKKYRMI*FWKSPG
Trigger: TCCTGGAGATTTCCAGAACAAGATCATGCGATACTT...TTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR CAA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAGACCGTGAATGCAGTTaGTTGAAAAGTTCACGGAAT +
Preference number: 3 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSADRECS*LKSSRN
Trigger: ATTCCGTGAACTTTTCAACAAACTGCATTCACGGTC...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
3UTR-3UTR CAA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTCTGCAAAGAAGGCGCTaGAGTAGTTTGAAGTTTCTG +
Preference number: 3 (lower is better)
Translates to: GADTTVFELSPRRSVHTILQRRR*SSLKFL
Trigger: CAGAAACTTCAAACTACTCAAGCGCCTTCTTTGCAG...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
3UTR TCA 72 bp ACATCTCCTCACTGTTTAGGTTGCGCCGGTGTACAGTaGTGGCATATAATGCATATGTCTTGCCATGATCAT +
Preference number: 3 (lower is better)
Translates to: TSPHCLGCAGVQ*WHIMHMSCHDH
Trigger: ATGATCATGGCAAGACATATGCATTATATGCCATCACTGTACACCGGCGCAACCTAAACAGTGAGGAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR TCA 72 bp CTAAGTGGAATATTGTCATCCACATTATCGTCAAGTTaGGCCGAAACTCGGCGATGTTCAGGGTCTGAATCA +
Preference number: 3 (lower is better)
Translates to: LSGILSSTLSSS*AETRRCSGSES
Trigger: TGATTCAGACCCTGAACATCGCCGAGTTTCGGCTCAACTTGACGATAATGTGGATGACAATATTCCACTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR CAA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCACTCTGTTATTTTCTGTaGAGCCTTTCTGAATACTCG +
Preference number: 3 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSALCYFL*SLSEYS
Trigger: CGAGTATTCAGAAAGGCTCAACAGAAAATAACAGAG...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR CAA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTTTTAATACCAGGATCTaGGCTCAGTGGTCTGATAAG +
Preference number: 3 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSFNTRI*AQWSDK
Trigger: CTTATCAGACCACTGAGCCAAGATCCTGGTATTAAA...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR-3UTR CAA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTAGGATCTTTTCTCACTaGCAAGTTGCAATGAAAGGG +
Preference number: 3 (lower is better)
Translates to: GADTTVFELSPRRSVHTIRIFSH*QVAMKG
Trigger: CCCTTTCATTGCAACTTGCAAGTGAGAAAAGATCCT...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR CCA 72 bp GCTAAGGTTATCAGTCAGTACAGCATACAAAGGGAATaGAGAGCACTGGCTAACCAAACATCAGTTAAGAGA +
Preference number: 3 (lower is better)
Translates to: AKVISQYSIQRE*RALANQTSVKR
Trigger: TCTCTTAACTGATGTTTGGTTAGCCAGTGCTCTCCATTCCCTTTGTATGCTGTACTGACTGATAACCTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR CAA 90 bp TCACACAAATCCCTTAGGAATCCTTCTTCATCTTTGGGGGAAGTGCACACTAGAGGTTCATCAATTATATaGGCACCCGTCAATCTTCTA +
Preference number: 3 (lower is better)
Translates to: SHKSLRNPSSSLGEVHTRGSSII*APVNLL
Trigger: TAGAAGATTGACGGGTGCCAATATAATTGATGAACC...TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATTCCTAAGGGATTTGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444712.5
3UTR TCA 72 bp GCTCAGCTAACATGCGCACATAAAGTGCATTCTGTCTaGAGGAAGGATAAAATCTTTCATCTCGTAGCATCA +
Preference number: 3 (lower is better)
Translates to: AQLTCAHKVHSV*RKDKIFHLVAS
Trigger: TGATGCTACGAGATGAAAGATTTTATCCTTCCTTCAGACAGAATGCACTTTATGTGCGCATGTTAGCTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR CAA 90 bp ATTCAGGTCACACTACAGACTAATTGTATCAGATTTTCTGGAGGTGGGGTCCAGAATCAGCTTAAAATTTaGTTGACGAGAACCACACAC +
Preference number: 3 (lower is better)
Translates to: IQVTLQTNCIRFSGGGVQNQLKI*LTRTTH
Trigger: GTGTGTGGTTCTCGTCAACAAAATTTTAAGCTGATT...CTGGACCCCACCTCCAGAAAATCTGATACAATTAGTCTGTAGTGTGACCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR CAA 90 bp GATCTTTTAACATGTCAAGCTCAGCTAACATGCGCACATAAAGTGCATTCTGTCAAGTATCGCATGATCTaGTTCTGGAAATCTCCAGGA +
Preference number: 3 (lower is better)
Translates to: DLLTCQAQLTCAHKVHSVKYRMI*FWKSPG
Trigger: TCCTGGAGATTTCCAGAACAAGATCATGCGATACTT...GACAGAATGCACTTTATGTGCGCATGTTAGCTGAGCTTGACATGTTAAAAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR CAA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAATGGTCAATGGCACAATaGATTTCAGCAACTATTTGG +
Preference number: 3 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKWSMAQ*ISATIW
Trigger: CCAAATAGTTGCTGAAATCAATTGTGCCATTGACCA...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR-3UTR CAA 90 bp TTGCCTGACTGCAATCGCTGTATTCTTGAGTCACATACCTTCTTTACGAATAGTCTGAATGAGTGCGTTTaGAAGAGTCTGCCTAATTTC +
Preference number: 3 (lower is better)
Translates to: LPDCNRCILESHTFFTNSLNECV*KSLPNF
Trigger: GAAATTAGGCAGACTCTTCAAAACGCACTCATTCAG...ACTATTCGTAAAGAAGGTATGTGACTCAAGAATACAGCGATTGCAGTCAGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444712.5
3UTR-3UTR CAA 90 bp TTCTCATGTGGAAGTCATGGAAGTCACTATAACGACGATAGGTTTTCCACATCTGCAATCGCTGTATTCTaGAGTCACATACCTTCTTTA +
Preference number: 3 (lower is better)
Translates to: FSCGSHGSHYNDDRFSTSAIAVF*SHIPSL
Trigger: TAAAGAAGGTATGTGACTCAAGAATACAGCGATTGC...AGATGTGGAAAACCTATCGTCGTTATAGTGACTTCCATGACTTCCACATGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR CAA 90 bp TTCCAACAGCAGCTGCTCTTAAAAGACCTTTGGTTTGGTTGGTTTGATGTTTTCACAGTATTTATTTCTTaGCCTGACTGCAATCGCTGT +
Preference number: 3 (lower is better)
Translates to: FQQQLLLKDLWFGWFDVFTVFIS*PDCNRC
Trigger: ACAGCGATTGCAGTCAGGCAAAGAAATAAATACTGT...GAAAACATCAAACCAACCAAACCAAAGGTCTTTTAAGAGCAGCTGCTGTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR CAA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAAGAATGCTGATTAGTTaGAAATGGAAGAAACCAACG +
Preference number: 3 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKRMLIS*KWKKPT
Trigger: CGTTGGTTTCTTCCATTTCAAACTAATCAGCATTCT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
3UTR-3UTR CAA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAATTTATCTCTGAACCATaGTTTTGTGCTTTCCTTAGC +
Preference number: 3 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKFISEP*FCAFLS
Trigger: GCTAAGGAAAGCACAAAACAATGGTTCAGAGATAAA...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
3UTR CCA 72 bp GAATACTTCATCCATGAGAAGCAGCATTACCCTAAGTaGAATATTGTCATCCACATTATCGTCAAGTTGAGC +
Preference number: 3 (lower is better)
Translates to: EYFIHEKQHYPK*NIVIHIIVKLS
Trigger: GCTCAACTTGACGATAATGTGGATGACAATATTCCACTTAGGGTAATGCTGCTTCTCATGGATGAAGTATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR-3UTR CAA 90 bp GATCTAAGATACTGTAATTCTTCTGCTGCCTTATCTCTGACTGCTTCTAGCTCTTGCTGTACCTTTCACTaGATCATCTTTCTCTGTTAT +
Preference number: 3 (lower is better)
Translates to: DLRYCNSSAALSLTASSSCCTFH*IIFLCY
Trigger: ATAACAGAGAAAGATGATCAAGTGAAAGGTACAGCA...AGAGCTAGAAGCAGTCAGAGATAAGGCAGCAGAAGAATTACAGTATCTTAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR CAA 90 bp CTCTTGGAGATGCCTTTTCTGATAAATACTGTTCATAAATTCCAACAGCAGCTGACAGTATTTATTTCTTaGCCTGACTGCAATCGCTGT +
Preference number: 3 (lower is better)
Translates to: LLEMPFLINTVHKFQQQLTVFIS*PDCNRC
Trigger: ACAGCGATTGCAGTCAGGCAAAGAAATAAATACTGT...CAGCTGCTGTTGGAATTTATGAACAGTATTTATCAGAAAAGGCATCTCCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR CAA 90 bp TTCTCATGTGGAAGTCATGGAAGTCACTATAACGACGATAGGTTTTCCACATCTAAAGTTTCCCAAAGTTaGCTGCAAGTTTCACAGTAT +
Preference number: 3 (lower is better)
Translates to: FSCGSHGSHYNDDRFSTSKVSQS*LQVSQY
Trigger: ATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTT...AGATGTGGAAAACCTATCGTCGTTATAGTGACTTCCATGACTTCCACATGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR-3UTR CAA 90 bp ACTCTTGTTCTCATTCGAATACTTTTATCTCTGCATGGAACAGCCTCTGCTAAATTTGGTTTGGTTGGTTaGATGTTTTCCATCTCTCTG +
Preference number: 3 (lower is better)
Translates to: TLVLIRILLSLHGTASAKFGLVG*MFSISL
Trigger: CAGAGAGATGGAAAACATCAAACCAACCAAACCAAA...TTTAGCAGAGGCTGTTCCATGCAGAGATAAAAGTATTCGAATGAGAACAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR TCA 72 bp ACAATTGTGTACATCTCTTCCTATTTCCATGTTCAGTaGCTTCATGCTGATAGCTTAAAACTGAACGTGGTG +
Preference number: 3 (lower is better)
Translates to: TIVYISSYFHVQ*LHADSLKLNVV
Trigger: CACCACGTTCAGTTTTAAGCTATCAGCATGAAGTCACTGAACATGGAAATAGGAAGAGATGTACACAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR TCA 72 bp AAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTaGAGACTTTCAAATTTCATAGCTGCCTTTCGCTCA +
Preference number: 3 (lower is better)
Translates to: KDICEQICMQSP*RLSNFIAAFRS
Trigger: TGAGCGAAAGGCAGCTATGAAATTTGAAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR CCA 72 bp TTGATAAGCATACAACTCCAAGGGTGGAAACAGAAGTaGATAGATGTAATAGAGCCTAGTCTTAATGCTAAG +
Preference number: 3 (lower is better)
Translates to: LISIQLQGWKQK*IDVIEPSLNAK
Trigger: CTTAGCATTAAGACTAGGCTCTATTACATCTATCCACTTCTGTTTCCACCCTTGGAGTTGTATGCTTATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR CAA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTCATCCTTCAGAGTCCTaGAAGAACTACTTTGTTAAC +
Preference number: 3 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFHPSES*KNYFVN
Trigger: GTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGATG...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR TCA 72 bp TCTTTTACTCAAATCAAAGGCATCAGTGCCAGTCTATaGAATTCAGCAAGTCACATCATTTCCCAAAGTTTG +
Preference number: 3 (lower is better)
Translates to: SFTQIKGISASL*NSASHIISQSL
Trigger: CAAACTTTGGGAAATGATGTGACTTGCTGAATTTCATAGACTGGCACTGATGCCTTTGATTTGAGTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR-3UTR CAA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTATGTTAGTGTGTGTTTaGGGAGGAAACATGATTGAA +
Preference number: 3 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFMLVCV*GGNMIE
Trigger: TTCAATCATGTTTCCTCCCAAAACACACACTAACAT...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR TCA 72 bp TTCTTCACAAACATTCCTGAACTTAAAGTTAATGTATaGGTACCCCCTACCATAGTCCTCAAAAATATACGG +
Preference number: 3 (lower is better)
Translates to: FFTNIPELKVNV*VPPTIVLKNIR
Trigger: CCGTATATTTTTGAGGACTATGGTAGGGGGTACTCATACATTAACTTTAAGTTCAGGAATGTTTGTGAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR TCA 72 bp TTTAAAACTATGCAGAAATCCTGCATAGAAGGGATGTaGATACTTCTAAGATGGATAAAATGGACAGTCAGA +
Preference number: 3 (lower is better)
Translates to: FKTMQKSCIEGM*ILLRWIKWTVR
Trigger: TCTGACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTCTGCATAGTTTTAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR GCA 72 bp TTCTGTTTATATTTCTGCATCTGCTTTGACCGTGAATaGAGTTTGTTGAAAAGTTCACGGAATTTATACTGT +
Preference number: 3 (lower is better)
Translates to: FCLYFCICFDRE*SLLKSSRNLYC
Trigger: ACAGTATAAATTCCGTGAACTTTTCAACAAACTGCATTCACGGTCAAAGCAGATGCAGAAATATAAACAGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
3UTR GCA 72 bp TATTACATGACCTTTATTTCCCTAATTGATGGCCAGTaGTCCTCACATTATATAGAAATGCTTTTTCACATG +
Preference number: 3 (lower is better)
Translates to: YYMTFISLIDGQ*SSHYIEMLFHM
Trigger: CATGTGAAAAAGCATTTCTATATAATGTGAGGAGCACTGGCCATCAATTAGGGAAATAAAGGTCATGTAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp CCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAAAGCAGCAGCGAAAACTaGTCGGGCCGCCGCCAACGG +
Preference number: 4 (lower is better)
Translates to: PGQNEHQLHRVECHLFCKSSSEN*SGRRQR
Trigger: CCGTTGGCGGCGGCCCGAGCAGTTTTCGCTGCTGCT...TTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR CCA 90 bp CCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAATTTACTCGGCTTCGCTaGCCTCCCCTCGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: PGQNEHQLHRVECHLFCKFTRLR*PPLGPV
Trigger: GACCGGGCCGAGGGGAGGCCAGCGAAGCCGAGTAAA...TTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR GCA 90 bp CCAACTGTGAGCTGGAGTAGGCAAACAATTGTGTACATCTCTTCCTATTTCCATAGCAGCAGCGAAAACTaGTCGGGCCGCCGCCAACGG +
Preference number: 4 (lower is better)
Translates to: PTVSWSRQTIVYISSYFHSSSEN*SGRRQR
Trigger: CCGTTGGCGGCGGCCCGAGCAGTTTTCGCTGCTGCT...ATGGAAATAGGAAGAGATGTACACAATTGTTTGCCTACTCCAGCTCACAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR GCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTGCCAACGGCGGCAACTaGTCCTTCAGTCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSANGGN*SFSLLP
Trigger: CGGGAGAAGACTGAAGGAGCAGTTGCCGCCGTTGGC...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CCA 90 bp GATCTAAGATACTGTAATTCTTCTGCTGCCTTATCTCTGACTGCTTCTAGCTCTTTTACTCGGCTTCGCTaGCCTCCCCTCGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: DLRYCNSSAALSLTASSSFTRLR*PPLGPV
Trigger: GACCGGGCCGAGGGGAGGCCAGCGAAGCCGAGTAAA...AGAGCTAGAAGCAGTCAGAGATAAGGCAGCAGAAGAATTACAGTATCTTAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444712.5
CDS-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAGCCAACGGCGGCAACTaGTCCTTCAGTCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKANGGN*SFSLLP
Trigger: CGGGAGAAGACTGAAGGAGCAGTTGCCGCCGTTGGC...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp CTCTTGGAGATGCCTTTTCTGATAAATACTGTTCATAAATTCCAACAGCAGCTGAGCAGCAGCGAAAACTaGTCGGGCCGCCGCCAACGG +
Preference number: 4 (lower is better)
Translates to: LLEMPFLINTVHKFQQQLSSSEN*SGRRQR
Trigger: CCGTTGGCGGCGGCCCGAGCAGTTTTCGCTGCTGCT...CAGCTGCTGTTGGAATTTATGAACAGTATTTATCAGAAAAGGCATCTCCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp TTCCATCCTTCAGAGTCCTTGAAGAACTACTTTGTTAACGGTGTCAAAAACTCATTTACTCGGCTTCGCTaGCCTCCCCTCGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: FHPSESLKNYFVNGVKNSFTRLR*PPLGPV
Trigger: GACCGGGCCGAGGGGAGGCCAGCGAAGCCGAGTAAA...TGAGTTTTTGACACCGTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR GCA 90 bp AACGACGATAGGTTTTCCACATCTCCTCACTGTTTAGGTTGCGCCGGTGTACAGCATCTTTGGGGGAAGTaGACACTAGATCACGGCAAA +
Preference number: 4 (lower is better)
Translates to: NDDRFSTSPHCLGCAGVQHLWGK*TLDHGK
Trigger: TTTGCCGTGATCTAGTGTGCACTTCCCCCAAAGATG...CTGTACACCGGCGCAACCTAAACAGTGAGGAGATGTGGAAAACCTATCGTCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAATTTACTCGGCTTCGCTaGCCTCCCCTCGGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKFTRLR*PPLGPV
Trigger: GACCGGGCCGAGGGGAGGCCAGCGAAGCCGAGTAAA...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CCA 90 bp GTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGTATTACTTCTAGCTGCTGTTaGGCGGTAACCCGGTATCCT +
Preference number: 4 (lower is better)
Translates to: VQGDCAKFPKVCCKFHSITSSCC*AVTRYP
Trigger: AGGATACCGGGTTACCGCCCAACAGCAGCTAGAAGT...AATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp AATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACTCTGAAACGTTTCACTaGGTCGGCTACTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: NAVQGDCAKFPKVCCKFHSETFH*VGYLFR
Trigger: CCTGAACAAGTAGCCGACTCAGTGAAACGTTTCAGA...GTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR GCA 90 bp GACTGCAATCGCTGTATTCTTGAGTCACATACCTTCTTTACGAATAGTAAGCTAGCCAACGGCGGCAACTaGTCCTTCAGTCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: DCNRCILESHTFFTNSKLANGGN*SFSLLP
Trigger: CGGGAGAAGACTGAAGGAGCAGTTGCCGCCGTTGGC...TAGCTTACTATTCGTAAAGAAGGTATGTGACTCAAGAATACAGCGATTGCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCAGCAGCAGCGAAAACTaGTCGGGCCGCCGCCAACGG +
Preference number: 4 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRISSSEN*SGRRQR
Trigger: CCGTTGGCGGCGGCCCGAGCAGTTTTCGCTGCTGCT...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCAGCAGCAGCGAAAACTaGTCGGGCCGCCGCCAACGG +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCSSSEN*SGRRQR
Trigger: CCGTTGGCGGCGGCCCGAGCAGTTTTCGCTGCTGCT...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp TTCCATCCTTCAGAGTCCTTGAAGAACTACTTTGTTAACGGTGTCAAAAACTCACCAGGAAGCGGAGGTTaGAGTGAGCCGAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: FHPSESLKNYFVNGVKNSPGSGG*SEPRLR
Trigger: GCGCAATCTCGGCTCACTGCAACCTCCGCTTCCTGG...TGAGTTTTTGACACCGTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR GCA 90 bp TGCAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAACATTGTCTACAAGAATaGTGTCCAGGGGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: CNIVYKNAVQGDCAKFPKHCLQE*CPGGLC
Trigger: GCACAGTCCCCCTGGACAGCATTCTTGTAGACAATG...TTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp TGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGTCCCTCAAGGAAAACTaGATAACTTGCTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: CCPGGLCKVSQSLLQVSQSLKEN*ITCWRG
Trigger: ACCTCTCCAGCAAGTTATCCAGTTTTCCTTGAGGGA...CTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTTTCACTTTTAAAGCCTaGGGCTCAGGGAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIFTFKA*GSGRGQ
Trigger: TTGGCCCCTCCCTGAGCCCCAGGCTTTAAAAGTGAA...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR TCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTCTGCTGCCTTATCTCTaGCTGCTTCTAGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTILLPYL*LLLALQ
Trigger: TTGGAGAGCTAGAAGCAGTCAGAGATAAGGCAGCAG...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp AATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAAGAATAGATGTGCTTaGCCTCCAGTTTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: NAVQGDCAKFPKVCCKFHKNRCA*PPVCCM
Trigger: CATGCAGCAAACTGGAGGTCAAGCACATCTATTCTT...GTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp GTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGTATTTGCGCCGGTGTACAGTaGTGGCATATAATGCATATG +
Preference number: 4 (lower is better)
Translates to: VQGDCAKFPKVCCKFHSICAGVQ*WHIMHM
Trigger: CATATGCATTATATGCCATCACTGTACACCGGCGCA...AATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp TGCAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAATGCGCCGGTGTACAGTaGTGGCATATAATGCATATG +
Preference number: 4 (lower is better)
Translates to: CNIVYKNAVQGDCAKFPKCAGVQ*WHIMHM
Trigger: CATATGCATTATATGCCATCACTGTACACCGGCGCA...TTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCATCTGAAACGTTTCACTaGGTCGGCTACTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSASETFH*VGYLFR
Trigger: CCTGAACAAGTAGCCGACTCAGTGAAACGTTTCAGA...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR TCA 90 bp AACGACGATAGGTTTTCCACATCTCCTCACTGTTTAGGTTGCGCCGGTGTACAGAGACACAACAGTATTTaGGTTAAGCCCCAGAAGATC +
Preference number: 4 (lower is better)
Translates to: NDDRFSTSPHCLGCAGVQRHNSI*VKPQKI
Trigger: GATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCT...CTGTACACCGGCGCAACCTAAACAGTGAGGAGATGTGGAAAACCTATCGTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR TCA 90 bp CCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAAAACGCCATTCTTGCTTaGGATGGGGGCAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PGQNEHQLHRVECHLFCKNAILA*DGGSFL
Trigger: GAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTT...TTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR GCA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTGCCAACGGCGGCAACTaGTCCTTCAGTCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFANGGN*SFSLLP
Trigger: CGGGAGAAGACTGAAGGAGCAGTTGCCGCCGTTGGC...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR GCA 90 bp TGCAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAACATCTTTGGGGGAAGTaGACACTAGATCACGGCAAA +
Preference number: 4 (lower is better)
Translates to: CNIVYKNAVQGDCAKFPKHLWGK*TLDHGK
Trigger: TTTGCCGTGATCTAGTGTGCACTTCCCCCAAAGATG...TTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTCATTGTCTACAAGAATaGTGTCCAGGGGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSHCLQE*CPGGLC
Trigger: GCACAGTCCCCCTGGACAGCATTCTTGTAGACAATG...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAATAAAACTTCTAGCTaGTGTTGGGCGGTAACCCGG +
Preference number: 4 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSANKTSS*CWAVTR
Trigger: CCGGGTTACCGCCCAACAGCAGCTAGAAGTTTTATT...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR GCA 90 bp AATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACCATGCGCACATAAAGTaGATTCTGTCTGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: NAVQGDCAKFPKVCCKFHHAHIK*ILSEGR
Trigger: CCTTCCTTCAGACAGAATGCACTTTATGTGCGCATG...GTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAACTTCTAGCTGCTGTTaGGCGGTAACCCGGTATCCT +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKTSSCC*AVTRYP
Trigger: AGGATACCGGGTTACCGCCCAACAGCAGCTAGAAGT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CCA 90 bp AAAAATTGTAGTGCAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAACTTCTAGCTGCTGTTaGGCGGTAACCCGGTATCCT +
Preference number: 4 (lower is better)
Translates to: KNCSATLSTRMLSRGTVQTSSCC*AVTRYP
Trigger: AGGATACCGGGTTACCGCCCAACAGCAGCTAGAAGT...TTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTGCACTACAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp CCAACTGTGAGCTGGAGTAGGCAAACAATTGTGTACATCTCTTCCTATTTCCATTCTTGTAGACTTGCCTaGCTAGAGGAGAGGGTGATC +
Preference number: 4 (lower is better)
Translates to: PTVSWSRQTIVYISSYFHSCRLA*LEERVI
Trigger: GATCACCCTCTCCTCTAGTCAGGCAAGTCTACAAGA...ATGGAAATAGGAAGAGATGTACACAATTGTTTGCCTACTCCAGCTCACAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR TCA 90 bp TGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGGGGGTTGGATCTTCATaGTTCAAAGTATCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: CCPGGLCKVSQSLLQVSQGVGSS*FKVSAN
Trigger: ATTAGCAGATACTTTGAATCATGAAGATCCAACCCC...CTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp TGCAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAACAAACGCCTGTGTCTaGAATGTAGGCATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: CNIVYKNAVQGDCAKFPKTNACV*NVGMKL
Trigger: CAACTTCATGCCTACATTTCAGACACAGGCGTTTGT...TTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTTGCGCCGGTGTACAGTaGTGGCATATAATGCATATG +
Preference number: 4 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSCAGVQ*WHIMHM
Trigger: CATATGCATTATATGCCATCACTGTACACCGGCGCA...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp CCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAATGCGCCGGTGTACAGTaGTGGCATATAATGCATATG +
Preference number: 4 (lower is better)
Translates to: PGQNEHQLHRVECHLFCKCAGVQ*WHIMHM
Trigger: CATATGCATTATATGCCATCACTGTACACCGGCGCA...TTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR TCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTACATTATCGTCAAGTTaGGCCGAAACTCGGCGATGT +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTITLSSS*AETRRC
Trigger: ACATCGCCGAGTTTCGGCTCAACTTGACGATAATGT...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTACATTATCGTCAAGTTaGGCCGAAACTCGGCGATGT +
Preference number: 4 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSTLSSS*AETRRC
Trigger: ACATCGCCGAGTTTCGGCTCAACTTGACGATAATGT...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTGGCTACTTGTTCAGGTaGAGTCATCCAGTCAACATG +
Preference number: 4 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSGYLFR*SHPVNM
Trigger: CATGTTGACTGGATGACTTCACCTGAACAAGTAGCC...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTGCCAAAATGCATCTCTaGAACGTTTCACTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIAKMHL*NVSLSR
Trigger: CCGACTCAGTGAAACGTTTCAGAGATGCATTTTGGC...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAAACGCCATTCTTGCTTaGGATGGGGGCAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKNAILA*DGGSFL
Trigger: GAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp TTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATCATCTTTGCCAACGGCGGCAACTaGTCCTTCAGTCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: FKEGIYKIFCCTFHLIIFANGGN*SFSLLP
Trigger: CGGGAGAAGACTGAAGGAGCAGTTGCCGCCGTTGGC...AAAGATGATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTCATCTTTGGGGGAAGTaGACACTAGATCACGGCAAA +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIHLWGK*TLDHGK
Trigger: TTTGCCGTGATCTAGTGTGCACTTCCCCCAAAGATG...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTTTCCCCATCCCCATATaGATAGACTGGCCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSFPIPI*IDWPQL
Trigger: TAACTGAGGCCAGTCTATCCATATGGGGATGGGGAA...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CCA 90 bp TCACACAAATCCCTTAGGAATCCTTCTTCATCTTTGGGGGAAGTGCACACTAGATTCCCCATCCCCATATaGATAGACTGGCCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: SHKSLRNPSSSLGEVHTRFPIPI*IDWPQL
Trigger: TAACTGAGGCCAGTCTATCCATATGGGGATGGGGAA...TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATTCCTAAGGGATTTGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTTTCCCCATCCCCATATaGATAGACTGGCCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIFPIPI*IDWPQL
Trigger: TAACTGAGGCCAGTCTATCCATATGGGGATGGGGAA...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
3UTR CAA 72 bp CTTTTTCAGGGTCGGAGCACTGTTTACAATGGGTGTTaGGACAATGGCAACAGGAGGCACAAACAACAATTG +
Preference number: 4 (lower is better)
Translates to: LFQGRSTVYNGC*DNGNRRHKQQL
Trigger: CAATTGTTGTTTGTGCCTCCTGTTGCCATTGTCCAAACACCCATTGTAAACAGTGCTCCGACCCTGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR TCA 90 bp CCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAATCTGTTGAGCCTTTCTaGATACTCGTAAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: PGQNEHQLHRVECHLFCKSVEPF*ILVSVC
Trigger: GCACACACTTACGAGTATTCAGAAAGGCTCAACAGA...TTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR TCA 90 bp TTCCAACAGCAGCTGCTCTTAAAAGACCTTTGGTTTGGTTGGTTTGATGTTTTCCTGCTGCCTTATCTCTaGCTGCTTCTAGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: FQQQLLLKDLWFGWFDVFLLPYL*LLLALQ
Trigger: TTGGAGAGCTAGAAGCAGTCAGAGATAAGGCAGCAG...GAAAACATCAAACCAACCAAACCAAAGGTCTTTTAAGAGCAGCTGCTGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTAAGAATAGATGTGCTTaGCCTCCAGTTTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIKNRCA*PPVCCM
Trigger: CATGCAGCAAACTGGAGGTCAAGCACATCTATTCTT...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTGCATATGTCTTGCCATaGTCATTACAAACGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIAYVLP*SLQTPV
Trigger: CACAGGCGTTTGTAATGATCATGGCAAGACATATGC...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000428135.7
CDS-3UTR TCA 90 bp TGCCATGATCATTACAAACGCCTGTGTCTGAAATGTAGGCATGAAGTTGTACTGGGCTACTTGTTCAGGTaGAGTCATCCAGTCAACATG +
Preference number: 4 (lower is better)
Translates to: CHDHYKRLCLKCRHEVVLGYLFR*SHPVNM
Trigger: CATGTTGACTGGATGACTTCACCTGAACAAGTAGCC...CAGTACAACTTCATGCCTACATTTCAGACACAGGCGTTTGTAATGATCATGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR TCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTGACCACAGCTCTTTCTaGTGTAAAAGACAGATGTGC +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIDHSSF*CKRQMC
Trigger: GCACATCTGTCTTTTACATCAGAAAGAGCTGTGGTC...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAGCATATGTCTTGCCATaGTCATTACAAACGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKAYVLP*SLQTPA
Trigger: GGCAGGCGTTTGTAATGATCATGGCAAGACATATGC...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR GCA 90 bp GAGAAGCAGCATTACCCTAAGTGGAATATTGTCATCCACATTATCGTCAAGTTGTCAGAAAAAGGACAATaGCAAGGCTTCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: EKQHYPKWNIVIHIIVKLSEKGQ*QGFPIP
Trigger: GGGGATGGGGAAGCCTTGGCATTGTCCTTTTTCTGA...CAACTTGACGATAATGTGGATGACAATATTCCACTTAGGGTAATGCTGCTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR GCA 90 bp AACGACGATAGGTTTTCCACATCTCCTCACTGTTTAGGTTGCGCCGGTGTACAGGAAAACTGGATAACTTaGTGGAGAGGTTCATCAATT +
Preference number: 4 (lower is better)
Translates to: NDDRFSTSPHCLGCAGVQENWIT*WRGSSI
Trigger: AATTGATGAACCTCTCCAGCAAGTTATCCAGTTTTC...CTGTACACCGGCGCAACCTAAACAGTGAGGAGATGTGGAAAACCTATCGTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAATGTCCAGGGGGACTGTaGAAAGTTTCCCAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKCPGGL*KVSQSL
Trigger: CAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACA...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp TGCCATGATCATTACAAACGCCTGTGTCTGAAATGTAGGCATGAAGTTGTACTGTGTCCAGGGGGACTGTaGAAAGTTTCCCAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: CHDHYKRLCLKCRHEVVLCPGGL*KVSQSL
Trigger: CAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACA...CAGTACAACTTCATGCCTACATTTCAGACACAGGCGTTTGTAATGATCATGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAAATAAAACTTCTAGCTaGTGTTGGGCGGTAACCCGG +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKNKTSS*CWAVTR
Trigger: CCGGGTTACCGCCCAACAGCAGCTAGAAGTTTTATT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp TCACACAAATCCCTTAGGAATCCTTCTTCATCTTTGGGGGAAGTGCACACTAGACATGCGCACATAAAGTaGATTCTGTCTGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SHKSLRNPSSSLGEVHTRHAHIK*ILSEGR
Trigger: CCTTCCTTCAGACAGAATGCACTTTATGTGCGCATG...TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATTCCTAAGGGATTTGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCACAAGCTCAGCTAACATaGGCACATAAAGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSAQAQLT*AHKVHS
Trigger: AGAATGCACTTTATGTGCGCATGTTAGCTGAGCTTG...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR GCA 90 bp CCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAATTTAGTCATTCCCTCTaGCAAGCTATCAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PGQNEHQLHRVECHLFCKFSHSL*QAIRKG
Trigger: TCCCTTCCTGATAGCTTGGCAGAGGGAATGACTAAA...TTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR GCA 90 bp GTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGTATTCTGGCACTTTGTCATTaGTGGAGAATGCTGATTAGT +
Preference number: 4 (lower is better)
Translates to: VQGDCAKFPKVCCKFHSILALCH*WRMLIS
Trigger: ACTAATCAGCATTCTCCAGCAATGACAAAGTGCCAG...AATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CCA 90 bp TGCCATGATCATTACAAACGCCTGTGTCTGAAATGTAGGCATGAAGTTGTACTGTTCCCCATCCCCATATaGATAGACTGGCCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: CHDHYKRLCLKCRHEVVLFPIPI*IDWPQL
Trigger: TAACTGAGGCCAGTCTATCCATATGGGGATGGGGAA...CAGTACAACTTCATGCCTACATTTCAGACACAGGCGTTTGTAATGATCATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp ATTCAGGTCACACTACAGACTAATTGTATCAGATTTTCTGGAGGTGGGGTCCAGTCTCCAACTGTGAGCTaGAGTAGGCAAACAATTGTG +
Preference number: 4 (lower is better)
Translates to: IQVTLQTNCIRFSGGGVQSPTVS*SRQTIV
Trigger: CACAATTGTTTGCCTACTCCAGCTCACAGTTGGAGA...CTGGACCCCACCTCCAGAAAATCTGATACAATTAGTCTGTAGTGTGACCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR TCA 90 bp ATTTTAGTCATTCCCTCTGCCAAGCTATCAGGAAGGGATTTAACTGCATTTGAACTGCTGCCTTATCTCTaGCTGCTTCTAGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: ILVIPSAKLSGRDLTAFELLPYL*LLLALQ
Trigger: TTGGAGAGCTAGAAGCAGTCAGAGATAAGGCAGCAG...TTCAAATGCAGTTAAATCCCTTCCTGATAGCTTGGCAGAGGGAATGACTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR TCA 90 bp TGCAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAACAATCGCTGTATTCTTaGGTCACATACCTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: CNIVYKNAVQGDCAKFPKQSLYS*VTYLLY
Trigger: GTAAAGAAGGTATGTGACTCAAGAATACAGCGATTG...TTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp ACTCTTGTTCTCATTCGAATACTTTTATCTCTGCATGGAACAGCCTCTGCTAAAAACGCCATTCTTGCTTaGGATGGGGGCAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: TLVLIRILLSLHGTASAKNAILA*DGGSFL
Trigger: GAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTT...TTTAGCAGAGGCTGTTCCATGCAGAGATAAAAGTATTCGAATGAGAACAAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAATTTAAAGGTATACACTaGGGGGTCTTGCCTACTAGC +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKFKGIH*GVLPTS
Trigger: GCTAGTAGGCAAGACCCCTCAGTGTATACCTTTAAA...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTTTCCAGCTAGATAACTaGGTCAGTCCATATAGCACA +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIFQLDN*VSPYST
Trigger: TGTGCTATATGGACTGACTCAGTTATCTAGCTGGAA...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR TCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTAAACCGATGGTGCTGTaGCTAAGAGTGAGCAAATTT +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIKPMVL*LRVSKF
Trigger: AAATTTGCTCACTCTTAGTCACAGCACCATCGGTTT...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR TCA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCATTCAGCTCATCTAAATaGAGTGGAGGAAAACACACA +
Preference number: 4 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSAFSSSK*SGGKHT
Trigger: TGTGTGTTTTCCTCCACTTCATTTAGATGAGCTGAA...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR GCA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGTCAGAAAAAGGACAATaGCAAGGCTTCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQSEKGQ*QGFPIP
Trigger: GGGGATGGGGAAGCCTTGGCATTGTCCTTTTTCTGA...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR GCA 90 bp ATTCAGGTCACACTACAGACTAATTGTATCAGATTTTCTGGAGGTGGGGTCCAGGAACTGTTCCTACACTaGAAAACCTATGGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: IQVTLQTNCIRFSGGGVQELFLH*KTYGFQ
Trigger: CTGGAAACCATAGGTTTTGCAGTGTAGGAACAGTTC...CTGGACCCCACCTCCAGAAAATCTGATACAATTAGTCTGTAGTGTGACCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR GCA 90 bp CAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTAAGAAGAATTCCTCGTaGAAGGATTTCCCTGACAAA +
Preference number: 4 (lower is better)
Translates to: QHCLQECCPGGLCKVSQSKKNSS*KDFPDK
Trigger: TTTGTCAGGGAAATCCTTGCACGAGGAATTCTTCTT...ACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGTATTATTTCTTTGCCTGACTaGAATCGCTGTATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: VQGDCAKFPKVCCKFHSIISLPD*NRCILE
Trigger: CTCAAGAATACAGCGATTGCAGTCAGGCAAAGAAAT...AATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAATTTCTTTGCCTGACTaGAATCGCTGTATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSAISLPD*NRCILE
Trigger: CTCAAGAATACAGCGATTGCAGTCAGGCAAAGAAAT...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR GCA 90 bp TTGCCTGACTGCAATCGCTGTATTCTTGAGTCACATACCTTCTTTACGAATAGTTGTCCAGGGGGACTGTaGAAAGTTTCCCAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: LPDCNRCILESHTFFTNSCPGGL*KVSQSL
Trigger: CAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACA...ACTATTCGTAAAGAAGGTATGTGACTCAAGAATACAGCGATTGCAGTCAGGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTGCCATTTGGCCAAAATaGATCTCTGAAACGTTTCAC +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIAIWPK*ISETFH
Trigger: GTGAAACGTTTCAGAGATGCATTTTGGCCAAATGGC...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp TCGGCTACTTGTTCAGGTGAAGTCATCCAGTCAACATGGTCAACTATTTTTCTAAACCAACGCCATTCTTaGTTGAGATGGGGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: SATCSGEVIQSTWSTIFLNQRHS*LRWGQF
Trigger: AAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTT...TAGAAAAATAGTTGACCATGTTGACTGGATGACTTCACCTGAACAAGTAGCCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTCTGGCACTTTGTCATTaGTGGAGAATGCTGATTAGT +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTILALCH*WRMLIS
Trigger: ACTAATCAGCATTCTCCAGCAATGACAAAGTGCCAG...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTTGTAAAAGACAGATGTaGATAGAGAAGGTGCACCAC +
Preference number: 4 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSCKRQM*IEKVHH
Trigger: GTGGTGCACCTTCTCTATGCACATCTGTCTTTTACA...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTTTAAGGCTAACCAAGTaGATCCATTGGTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTILRLTK*IHWSMA
Trigger: TGCCATTGACCAATGGATGCACTTGGTTAGCCTTAA...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CCA 90 bp AACGACGATAGGTTTTCCACATCTCCTCACTGTTTAGGTTGCGCCGGTGTACAGGTTCATCAATTATATTaGCACCCGTCAATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: NDDRFSTSPHCLGCAGVQVHQLY*HPSIFY
Trigger: ATAGAAGATTGACGGGTGCCAATATAATTGATGAAC...CTGTACACCGGCGCAACCTAAACAGTGAGGAGATGTGGAAAACCTATCGTCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp TGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGAACTGGATAACTTGCTaGAGAGGTTCATCAATTATA +
Preference number: 4 (lower is better)
Translates to: CCPGGLCKVSQSLLQVSQNWITC*RGSSII
Trigger: TATAATTGATGAACCTCTCCAGCAAGTTATCCAGTT...CTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAATCCCTCAAGGAAAACTaGATAACTTGCTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKSLKEN*ITCWRG
Trigger: ACCTCTCCAGCAAGTTATCCAGTTTTCCTTGAGGGA...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CCA 90 bp TCACACAAATCCCTTAGGAATCCTTCTTCATCTTTGGGGGAAGTGCACACTAGAATCCTTCTTCATCTTTaGGGGAAGTGCACACTAGAT +
Preference number: 4 (lower is better)
Translates to: SHKSLRNPSSSLGEVHTRILLHL*GKCTLD
Trigger: ATCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGAT...TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATTCCTAAGGGATTTGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTATCCTTCTTCATCTTTaGGGGAAGTGCACACTAGAT +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIILLHL*GKCTLD
Trigger: ATCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGAT...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CCA 90 bp TTCCAACAGCAGCTGCTCTTAAAAGACCTTTGGTTTGGTTGGTTTGATGTTTTCCGCATGATCTTGTTCTaGAAATCTCCAGGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: FQQQLLLKDLWFGWFDVFRMILF*KSPGGS
Trigger: GCTACCTCCTGGAGATTTCCAGAACAAGATCATGCG...GAAAACATCAAACCAACCAAACCAAAGGTCTTTTAAGAGCAGCTGCTGTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTAAGCTCCCAAATAACTaGGATACCAATACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIKLPNN*DTNTLS
Trigger: GGACAGAGTATTGGTATCCCAGTTATTTGGGAGCTT...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR CAA 72 bp CTGATTAGTTTGAAATGGAAGAAACCAACGCCATTCTaGCTTGAGATGGGGGCAGTTTTCTCTCAATGTTGC +
Preference number: 4 (lower is better)
Translates to: LISLKWKKPTPF*LEMGAVFSQCC
Trigger: GCAACATTGAGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAAACTAATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp CCAACTGTGAGCTGGAGTAGGCAAACAATTGTGTACATCTCTTCCTATTTCCATATCAGTGCCAGTCTATaGAATTCAGCAAGTCACATC +
Preference number: 4 (lower is better)
Translates to: PTVSWSRQTIVYISSYFHISASL*NSASHI
Trigger: GATGTGACTTGCTGAATTTCATAGACTGGCACTGAT...ATGGAAATAGGAAGAGATGTACACAATTGTTTGCCTACTCCAGCTCACAGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR TCA 90 bp TTGCCTGACTGCAATCGCTGTATTCTTGAGTCACATACCTTCTTTACGAATAGTAAGAATAGATGTGCTTaGCCTCCAGTTTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: LPDCNRCILESHTFFTNSKNRCA*PPVCCM
Trigger: CATGCAGCAAACTGGAGGTCAAGCACATCTATTCTT...ACTATTCGTAAAGAAGGTATGTGACTCAAGAATACAGCGATTGCAGTCAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAATTTGCCCATGTTGTCTaGCATTTTAGTCATTCCCTC +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKFAHVV*HFSHSL
Trigger: GAGGGAATGACTAAAATGTCAGACAACATGGGCAAA...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAAGACACAACAGTATTTaGGTTAAGCCCCAGAAGATC +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKRHNSI*VKPQKI
Trigger: GATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAACTCTTTCTCCAGACCTaGAAGAGATGTTTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKLFLQT*KRCFKD
Trigger: ATCCTTGAAACATCTCTTTCAGGTCTGGAGAAAGAG...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTTCAGAAAAAGGACAATaGCAAGGCTTCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFSEKGQ*QGFPIP
Trigger: GGGGATGGGGAAGCCTTGGCATTGTCCTTTTTCTGA...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR GCA 90 bp CTTCAACTTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATTCAGAAAAAGGACAATaGCAAGGCTTCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: LQLQRRYLQDLLLYLSLDSEKGQ*QGFPIP
Trigger: GGGGATGGGGAAGCCTTGGCATTGTCCTTTTTCTGA...ATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAAGTTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAGAAAACTGGATAACTTaGTGGAGAGGTTCATCAATT +
Preference number: 4 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSAENWIT*WRGSSI
Trigger: AATTGATGAACCTCTCCAGCAAGTTATCCAGTTTTC...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR GCA 90 bp TTCCATCCTTCAGAGTCCTTGAAGAACTACTTTGTTAACGGTGTCAAAAACTCATCAGGTTTACAAATCTaGCTCTGCCCCCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: FHPSESLKNYFVNGVKNSSGLQI*LCPLFT
Trigger: AGTGAAGAGGGGGCAGAGGCAGATTTGTAAACCTGA...TGAGTTTTTGACACCGTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR GCA 90 bp TATTGTCATCCACATTATCGTCAAGTTGAGCCGAAACTCGGCGATGTTCAGGGTATCTACAAGATCTTCTaGTGTACCTTTCACTTGATC +
Preference number: 4 (lower is better)
Translates to: YCHPHYRQVEPKLGDVQGIYKIF*CTFHLI
Trigger: GATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGAT...ACCCTGAACATCGCCGAGTTTCGGCTCAACTTGACGATAATGTGGATGACAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR GCA 90 bp ACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTAAGAAGAATTCCTCGTaGAAGGATTTCCCTGACAAA +
Preference number: 4 (lower is better)
Translates to: TLSTRMLSRGTVQSFPKFKKNSS*KDFPDK
Trigger: TTTGTCAGGGAAATCCTTGCACGAGGAATTCTTCTT...AAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTAAGAAGAATTCCTCGTaGAAGGATTTCCCTGACAAA +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIKKNSS*KDFPDK
Trigger: TTTGTCAGGGAAATCCTTGCACGAGGAATTCTTCTT...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTATTTCTTTGCCTGACTaGAATCGCTGTATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIISLPD*NRCILE
Trigger: CTCAAGAATACAGCGATTGCAGTCAGGCAAAGAAAT...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGTGTCCAGGGGGACTGTaGAAAGTTTCCCAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQCPGGL*KVSQSL
Trigger: CAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACA...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR GCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAACATTGTCTACAAGAATaGTGTCCAGGGGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKHCLQE*CPGGLC
Trigger: GCACAGTCCCCCTGGACAGCATTCTTGTAGACAATG...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp TTTATGCTTCCTGTAGGAGACCCATTAAAAGATTCTCCATCCCCATCATCGGATCAAGCTCAGCTAACATaGGCACATAAAGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: FMLPVGDPLKDSPSPSSDQAQLT*AHKVHS
Trigger: AGAATGCACTTTATGTGCGCATGTTAGCTGAGCTTG...ATCCGATGATGGGGATGGAGAATCTTTTAATGGGTCTCCTACAGGAAGCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp TTTATGCTTCCTGTAGGAGACCCATTAAAAGATTCTCCATCCCCATCATCGGATCAGCCTCTGCTAAAATaGCATTTGGCCAAAATGCAT +
Preference number: 4 (lower is better)
Translates to: FMLPVGDPLKDSPSPSSDQPLLK*HLAKMH
Trigger: ATGCATTTTGGCCAAATGGCATTTTAGCAGAGGCTG...ATCCGATGATGGGGATGGAGAATCTTTTAATGGGTCTCCTACAGGAAGCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAACAGCCTCTGCTAAAATaGCATTTGGCCAAAATGCAT +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKQPLLK*HLAKMH
Trigger: ATGCATTTTGGCCAAATGGCATTTTAGCAGAGGCTG...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTGAATACTTTTATCTCTaGATGGAACAGCCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIEYFYL*MEQPLL
Trigger: TAGCAGAGGCTGTTCCATGCAGAGATAAAAGTATTC...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAGAACATATGAGAAATaGCTAGTACAGTGCCTGATA +
Preference number: 4 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSARTYEK*LVQCLI
Trigger: TATCAGGCACTGTACTAGGCATTTCTCATATGTTCT...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR CCA 90 bp TTCCATCCTTCAGAGTCCTTGAAGAACTACTTTGTTAACGGTGTCAAAAACTCATTCCCCATCCCCATATaGATAGACTGGCCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: FHPSESLKNYFVNGVKNSFPIPI*IDWPQL
Trigger: TAACTGAGGCCAGTCTATCCATATGGGGATGGGGAA...TGAGTTTTTGACACCGTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CCA 90 bp TTCTCATGTGGAAGTCATGGAAGTCACTATAACGACGATAGGTTTTCCACATCTTCCCTCAAGGAAAACTaGATAACTTGCTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: FSCGSHGSHYNDDRFSTSSLKEN*ITCWRG
Trigger: ACCTCTCCAGCAAGTTATCCAGTTTTCCTTGAGGGA...AGATGTGGAAAACCTATCGTCGTTATAGTGACTTCCATGACTTCCACATGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp ATAACTCCCCAAATGGTATTCAAAATGTGGAGTGTGATGGAGTATGTTAGTGTGTGGGTGTTTGGACAATaGCAACAGGAGGCACAAACA +
Preference number: 4 (lower is better)
Translates to: ITPQMVFKMWSVMEYVSVWVFGQ*QQEAQT
Trigger: TGTTTGTGCCTCCTGTTGCCATTGTCCAAACACCCA...CACACTAACATACTCCATCACACTCCACATTTTGAATACCATTTGGGGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CCA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGCGCATGATCTTGTTCTaGAAATCTCCAGGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQRMILF*KSPGGS
Trigger: GCTACCTCCTGGAGATTTCCAGAACAAGATCATGCG...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR CCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTGCACTTTGTCATTGCTaGAGAATGCTGATTAGTTTG +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIALCHC*RMLISL
Trigger: CAAACTAATCAGCATTCTCCAGCAATGACAAAGTGC...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTTATCCTCTCCAACTGTaGGCTGGAGTAGGCAAACAA +
Preference number: 4 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFYPLQL*AGVGKQ
Trigger: TTGTTTGCCTACTCCAGCTCACAGTTGGAGAGGATA...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR TCA 90 bp ATTCAGGTCACACTACAGACTAATTGTATCAGATTTTCTGGAGGTGGGGTCCAGCAGGTATCACACAACTaGCTTTTGATAAGCATACAA +
Preference number: 4 (lower is better)
Translates to: IQVTLQTNCIRFSGGGVQQVSHN*LLISIQ
Trigger: TTGTATGCTTATCAAAAGTCAGTTGTGTGATACCTG...CTGGACCCCACCTCCAGAAAATCTGATACAATTAGTCTGTAGTGTGACCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR TCA 90 bp ATAACTTGCTGGAGAGGTTCATCAATTATATTGGCACCCGTCAATCTTCTATCATCTGTTGAGCCTTTCTaGATACTCGTAAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: ITCWRGSSIILAPVNLLSSVEPF*ILVSVC
Trigger: GCACACACTTACGAGTATTCAGAAAGGCTCAACAGA...TGATAGAAGATTGACGGGTGCCAATATAATTGATGAACCTCTCCAGCAAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444712.5
CDS-3UTR TCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTGCTGTACCTTTCACTTaGTCATCTTTCTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIAVPFT*SSFSVI
Trigger: AATAACAGAGAAAGATGATCAAGTGAAAGGTACAGC...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp TCAATTATATTGGCACCCGTCAATCTTCTATCAATCTTAATAGTCCTGGCTTCCGCATATGTCTTGCCATaGTCATTACAAACGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SIILAPVNLLSILIVLASAYVLP*SLQTPV
Trigger: CACAGGCGTTTGTAATGATCATGGCAAGACATATGC...GGAAGCCAGGACTATTAAGATTGATAGAAGATTGACGGGTGCCAATATAATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444712.5
CDS-3UTR TCA 90 bp GAAATCCTGCATAGAAGGGATGTGAATACTTCTAAGATGGATAAAATGGACAGTTCTGAAACGTTTCACTaGGTCGGCTACTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: EILHRRDVNTSKMDKMDSSETFH*VGYLFR
Trigger: CCTGAACAAGTAGCCGACTCAGTGAAACGTTTCAGA...ACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR TCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAGCCAAAATGCATCTCTaGAACGTTTCACTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKAKMHL*NVSLSR
Trigger: CCGACTCAGTGAAACGTTTCAGAGATGCATTTTGGC...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp GAAATCCTGCATAGAAGGGATGTGAATACTTCTAAGATGGATAAAATGGACAGTCACTTATGGCCATGCTaGTGCTTCCTACAGACATGT +
Preference number: 4 (lower is better)
Translates to: EILHRRDVNTSKMDKMDSHLWPC*CFLQTC
Trigger: ACATGTCTGTAGGAAGCATCAGCATGGCCATAAGTG...ACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp GATCTAAGTGAAAACAAGACAGTGATATCTTGTTCCAATCTTAAAGCTCCCAAATCAGAAAAAGGACAATaGCAAGGCTTCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: DLSENKTVISCSNLKAPKSEKGQ*QGFPIP
Trigger: GGGGATGGGGAAGCCTTGGCATTGTCCTTTTTCTGA...TTTGGGAGCTTTAAGATTGGAACAAGATATCACTGTCTTGTTTTCACTTAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTGAAAACTGGATAACTTaGTGGAGAGGTTCATCAATT +
Preference number: 4 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSENWIT*WRGSSI
Trigger: AATTGATGAACCTCTCCAGCAAGTTATCCAGTTTTC...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp TCACACAAATCCCTTAGGAATCCTTCTTCATCTTTGGGGGAAGTGCACACTAGAATCTACAAGATCTTCTaGTGTACCTTTCACTTGATC +
Preference number: 4 (lower is better)
Translates to: SHKSLRNPSSSLGEVHTRIYKIF*CTFHLI
Trigger: GATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGAT...TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATTCCTAAGGGATTTGTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GAAATCCTGCATAGAAGGGATGTGAATACTTCTAAGATGGATAAAATGGACAGTCATCTTTGGGGGAAGTaGACACTAGATCACGGCAAA +
Preference number: 4 (lower is better)
Translates to: EILHRRDVNTSKMDKMDSHLWGK*TLDHGK
Trigger: TTTGCCGTGATCTAGTGTGCACTTCCCCCAAAGATG...ACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAAAGAAGAATTCCTCGTaGAAGGATTTCCCTGACAAA +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKKKNSS*KDFPDK
Trigger: TTTGTCAGGGAAATCCTTGCACGAGGAATTCTTCTT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp AAAAATTGTAGTGCAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAATTTCTTTGCCTGACTaGAATCGCTGTATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: KNCSATLSTRMLSRGTVQISLPD*NRCILE
Trigger: CTCAAGAATACAGCGATTGCAGTCAGGCAAAGAAAT...TTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTGCACTACAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTCAGTATTTATTTCTTTaGCTGACTGCAATCGCTGTA +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIQYLFL*LTAIAV
Trigger: TACAGCGATTGCAGTCAGGCAAAGAAATAAATACTG...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp TCACACAAATCCCTTAGGAATCCTTCTTCATCTTTGGGGGAAGTGCACACTAGACAGTATTTATTTCTTTaGCTGACTGCAATCGCTGTA +
Preference number: 4 (lower is better)
Translates to: SHKSLRNPSSSLGEVHTRQYLFL*LTAIAV
Trigger: TACAGCGATTGCAGTCAGGCAAAGAAATAAATACTG...TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATTCCTAAGGGATTTGTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTCAGTATTTATTTCTTTaGCTGACTGCAATCGCTGTA +
Preference number: 4 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSQYLFL*LTAIAV
Trigger: TACAGCGATTGCAGTCAGGCAAAGAAATAAATACTG...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCCATTGTCTACAAGAATaGTGTCCAGGGGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCHCLQE*CPGGLC
Trigger: GCACAGTCCCCCTGGACAGCATTCTTGTAGACAATG...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGCATGCGCACATAAAGTaGATTCTGTCTGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQHAHIK*ILSEGR
Trigger: CCTTCCTTCAGACAGAATGCACTTTATGTGCGCATG...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR GCA 90 bp GAGAAGCAGCATTACCCTAAGTGGAATATTGTCATCCACATTATCGTCAAGTTGCAAGCTCAGCTAACATaGGCACATAAAGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: EKQHYPKWNIVIHIIVKLQAQLT*AHKVHS
Trigger: AGAATGCACTTTATGTGCGCATGTTAGCTGAGCTTG...CAACTTGACGATAATGTGGATGACAATATTCCACTTAGGGTAATGCTGCTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTGGAGCTAACAGTAACTaGAAATATGCATTTAGATCC +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIGANSN*KYAFRS
Trigger: GGATCTAAATGCATATTTGCAGTTACTGTTAGCTCC...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGTATTTATTTCGCCATTTGGCCAAAATaGATCTCTGAAACGTTTCAC +
Preference number: 4 (lower is better)
Translates to: GDCAKFPKVCCKFHSIYFAIWPK*ISETFH
Trigger: GTGAAACGTTTCAGAGATGCATTTTGGCCAAATGGC...GAAATAAATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAGAATACTTTTATCTCTaGATGGAACAGCCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKEYFYL*MEQPLL
Trigger: TAGCAGAGGCTGTTCCATGCAGAGATAAAAGTATTC...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAAACCAACGCCATTCTTaGTTGAGATGGGGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKNQRHS*LRWGQF
Trigger: AAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTT...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAACCACATGCTTCTTTTTaGACAAAGAATGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKPHASF*TKNAKR
Trigger: CCTTTTGGCATTCTTTGTGCAAAAAGAAGCATGTGG...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTCTAATTGATGGCCAGTaGTCCTCACATTATATAGAA +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTILIDGQ*SSHYIE
Trigger: TTCTATATAATGTGAGGAGCACTGGCCATCAATTAG...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CCA 90 bp ATAACTCCCCAAATGGTATTCAAAATGTGGAGTGTGATGGAGTATGTTAGTGTGTCCCTCAAGGAAAACTaGATAACTTGCTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ITPQMVFKMWSVMEYVSVSLKEN*ITCWRG
Trigger: ACCTCTCCAGCAAGTTATCCAGTTTTCCTTGAGGGA...CACACTAACATACTCCATCACACTCCACATTTTGAATACCATTTGGGGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CCA 90 bp TTCCATCCTTCAGAGTCCTTGAAGAACTACTTTGTTAACGGTGTCAAAAACTCATTCTGGAAAACGCACTaGACTGACACAGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: FHPSESLKNYFVNGVKNSFWKTH*TDTDAF
Trigger: AAAGGCATCTGTGTCAGTCCAGTGCGTTTTCCAGAA...TGAGTTTTTGACACCGTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CCA 90 bp ATAACTCCCCAAATGGTATTCAAAATGTGGAGTGTGATGGAGTATGTTAGTGTGGCTCTTTTTGTCCCATaGCTACTTAATGCCAATCCC +
Preference number: 4 (lower is better)
Translates to: ITPQMVFKMWSVMEYVSVALFVP*LLNANP
Trigger: GGGATTGGCATTAAGTAGCCATGGGACAAAAAGAGC...CACACTAACATACTCCATCACACTCCACATTTTGAATACCATTTGGGGAGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CCA 90 bp ATAACTCCCCAAATGGTATTCAAAATGTGGAGTGTGATGGAGTATGTTAGTGTGTTTACAATGGGTGTTTaGACAATGGCAACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ITPQMVFKMWSVMEYVSVFTMGV*TMATGG
Trigger: GCCTCCTGTTGCCATTGTCCAAACACCCATTGTAAA...CACACTAACATACTCCATCACACTCCACATTTTGAATACCATTTGGGGAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CCA 90 bp GAAATCCTGCATAGAAGGGATGTGAATACTTCTAAGATGGATAAAATGGACAGTCGCATGATCTTGTTCTaGAAATCTCCAGGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: EILHRRDVNTSKMDKMDSRMILF*KSPGGS
Trigger: GCTACCTCCTGGAGATTTCCAGAACAAGATCATGCG...ACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CCA 90 bp TCACACAAATCCCTTAGGAATCCTTCTTCATCTTTGGGGGAAGTGCACACTAGACTGATTAGTTTGAAATaGAAGAAACCAACGCCATTC +
Preference number: 4 (lower is better)
Translates to: SHKSLRNPSSSLGEVHTRLISLK*KKPTPF
Trigger: GAATGGCGTTGGTTTCTTCCATTTCAAACTAATCAG...TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATTCCTAAGGGATTTGTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTCTGATTAGTTTGAAATaGAAGAAACCAACGCCATTC +
Preference number: 4 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSLISLK*KKPTPF
Trigger: GAATGGCGTTGGTTTCTTCCATTTCAAACTAATCAG...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAGCACTTTGTCATTGCTaGAGAATGCTGATTAGTTTG +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKALCHC*RMLISL
Trigger: CAAACTAATCAGCATTCTCCAGCAATGACAAAGTGC...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAGCCTGCCACAGCATATaGGTCATAGTCAGCATATAC +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKACHSI*VIVSIY
Trigger: GTATATGCTGACTATGACCCATATGCTGTGGCAGGC...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR TCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAATCTGTTGAGCCTTTCTaGATACTCGTAAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKSVEPF*ILVSVC
Trigger: GCACACACTTACGAGTATTCAGAAAGGCTCAACAGA...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp GATCTTTTAACATGTCAAGCTCAGCTAACATGCGCACATAAAGTGCATTCTGTCCAATCGCTGTATTCTTaGGTCACATACCTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: DLLTCQAQLTCAHKVHSVQSLYS*VTYLLY
Trigger: GTAAAGAAGGTATGTGACTCAAGAATACAGCGATTG...GACAGAATGCACTTTATGTGCGCATGTTAGCTGAGCTTGACATGTTAAAAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAATTTATTTCTTTGCCTaGCTGCAATCGCTGTATTCT +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKIYFFA*LQSLYS
Trigger: AGAATACAGCGATTGCAGTCAGGCAAAGAAATAAAT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp GAAATCCTGCATAGAAGGGATGTGAATACTTCTAAGATGGATAAAATGGACAGTAAGAATAGATGTGCTTaGCCTCCAGTTTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: EILHRRDVNTSKMDKMDSKNRCA*PPVCCM
Trigger: CATGCAGCAAACTGGAGGTCAAGCACATCTATTCTT...ACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR TCA 90 bp GATCTAAGATACTGTAATTCTTCTGCTGCCTTATCTCTGACTGCTTCTAGCTCTGGGGTTGGATCTTCATaGTTCAAAGTATCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: DLRYCNSSAALSLTASSSGVGSS*FKVSAN
Trigger: ATTAGCAGATACTTTGAATCATGAAGATCCAACCCC...AGAGCTAGAAGCAGTCAGAGATAAGGCAGCAGAAGAATTACAGTATCTTAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAATTTCAAACTGTTCAGTaGTTCTCATGTGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKFQTVQ*FSCGSH
Trigger: ATGACTTCCACATGAGAATCACTGAACAGTTTGAAA...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp ATTTTAGTCATTCCCTCTGCCAAGCTATCAGGAAGGGATTTAACTGCATTTGAATTTGCCCATGTTGTCTaGCATTTTAGTCATTCCCTC +
Preference number: 4 (lower is better)
Translates to: ILVIPSAKLSGRDLTAFEFAHVV*HFSHSL
Trigger: GAGGGAATGACTAAAATGTCAGACAACATGGGCAAA...TTCAAATGCAGTTAAATCCCTTCCTGATAGCTTGGCAGAGGGAATGACTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR TCA 90 bp TTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATCATCTTTACATTATCGTCAAGTTaGGCCGAAACTCGGCGATGT +
Preference number: 4 (lower is better)
Translates to: FKEGIYKIFCCTFHLIIFTLSSS*AETRRC
Trigger: ACATCGCCGAGTTTCGGCTCAACTTGACGATAATGT...AAAGATGATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR TCA 90 bp GATCTAAGTGAAAACAAGACAGTGATATCTTGTTCCAATCTTAAAGCTCCCAAAGGCTACTTGTTCAGGTaGAGTCATCCAGTCAACATG +
Preference number: 4 (lower is better)
Translates to: DLSENKTVISCSNLKAPKGYLFR*SHPVNM
Trigger: CATGTTGACTGGATGACTTCACCTGAACAAGTAGCC...TTTGGGAGCTTTAAGATTGGAACAAGATATCACTGTCTTGTTTTCACTTAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR TCA 90 bp GAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAAAAGATGCCAAAATGCATCTCTaGAACGTTTCACTGAGTCGG +
Preference number: 4 (lower is better)
Translates to: ERSSKDKFMLPVGDPLKDAKMHL*NVSLSR
Trigger: CCGACTCAGTGAAACGTTTCAGAGATGCATTTTGGC...ATCTTTTAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAATGCATAGAAGGGATGTaGATACTTCTAAGATGGATA +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKCIEGM*ILLRWI
Trigger: TATCCATCTTAGAAGTATTCACATCCCTTCTATGCA...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR TCA 90 bp GAAATCCTGCATAGAAGGGATGTGAATACTTCTAAGATGGATAAAATGGACAGTGGGCAGAGGCATATATaGAAATCACTGCACTTATGG +
Preference number: 4 (lower is better)
Translates to: EILHRRDVNTSKMDKMDSGQRHI*KSLHLW
Trigger: CCATAAGTGCAGTGATTTTCATATATGCCTCTGCCC...ACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR TCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAATGTTCTGTGTGTTTTTaGGTCTCTCTATTTCTACTG +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKCSVCF*VSLFLL
Trigger: CAGTAGAAATAGAGAGACTCAAAAACACACAGAACA...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR TCA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGATAGGTGCAATGAGATaGAGGATTAGCCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQIGAMR*RISLGE
Trigger: TTCACCAAGGCTAATCCTTCATCTCATTGCACCTAT...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR GCA 90 bp CCAACTGTGAGCTGGAGTAGGCAAACAATTGTGTACATCTCTTCCTATTTCCATGAAAACTGGATAACTTaGTGGAGAGGTTCATCAATT +
Preference number: 4 (lower is better)
Translates to: PTVSWSRQTIVYISSYFHENWIT*WRGSSI
Trigger: AATTGATGAACCTCTCCAGCAAGTTATCCAGTTTTC...ATGGAAATAGGAAGAGATGTACACAATTGTTTGCCTACTCCAGCTCACAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR GCA 90 bp GGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGTATTTATTTCATACTCGTAAGTGTGTaGCAAAGTCATCTACAATGC +
Preference number: 4 (lower is better)
Translates to: GDCAKFPKVCCKFHSIYFILVSV*QSHLQC
Trigger: GCATTGTAGATGACTTTGGCACACACTTACGAGTAT...GAAATAAATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAATCTACAAGATCTTCTaGTGTACCTTTCACTTGATC +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKIYKIF*CTFHLI
Trigger: GATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGAT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAACAGTATTTATTTCTTTaGCTGACTGCAATCGCTGTA +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKQYLFL*LTAIAV
Trigger: TACAGCGATTGCAGTCAGGCAAAGAAATAAATACTG...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp CCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAAAAGTTTCCCAAAGTTTaGTGCAAGTTTCACAGTATT +
Preference number: 4 (lower is better)
Translates to: PGQNEHQLHRVECHLFCKKFPKV*CKFHSI
Trigger: AATACTGTGAAACTTGCAGCAAACTTTGGGAAACTT...TTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR GCA 90 bp ACATTTGAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAAATAAAACTTCTAGCTaGTGTTGGGCGGTAACCCGG +
Preference number: 4 (lower is better)
Translates to: TFERSSKDKFMLPVGDPLNKTSS*CWAVTR
Trigger: CCGGGTTACCGCCCAACAGCAGCTAGAAGTTTTATT...TAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTCAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTATAATGCATATGTCTTaGCATGATCATTACAAACGC +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIIMHMS*HDHYKR
Trigger: GCGTTTGTAATGATCATGGCAAGACATATGCATTAT...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTCAGGAAGTTTCAATATaGTTGAGAGACTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIQEVSI*LRDFQT
Trigger: AGTTTGAAAGTCTCTCAAGCATATTGAAACTTCCTG...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTCATTCCTCATTGAATTaGGAAGTGGATTTACAAAAG +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIHSSLN*EVDLQK
Trigger: CTTTTGTAAATCCACTTCGCAATTCAATGAGGAATG...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp TGCCATGATCATTACAAACGCCTGTGTCTGAAATGTAGGCATGAAGTTGTACTGTGCTTTGACCGTGAATaGAGTTTGTTGAAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: CHDHYKRLCLKCRHEVVLCFDRE*SLLKSS
Trigger: TGAACTTTTCAACAAACTGCATTCACGGTCAAAGCA...CAGTACAACTTCATGCCTACATTTCAGACACAGGCGTTTGTAATGATCATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR GCA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTTTCTGTTTATATTTCTaGATCTGCTTTGACCGTGAA +
Preference number: 4 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSFCLYF*ICFDRE
Trigger: TTCACGGTCAAAGCAGATGCAGAAATATAAACAGAA...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAACCTACAAAATCATTATaGCAAACAAACTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKPTKSL*QTNSSK
Trigger: CTTGGAGGAGTTTGTTTGGCATAATGATTTTGTAGG...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGATCATTACAAACGCCTaGCACAGCATATGGGTCATA +
Preference number: 4 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQIITNA*HSIWVI
Trigger: TATGACCCATATGCTGTGGCAGGCGTTTGTAATGAT...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR GCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAGAAGGCAAACATAAGTaGAAAGAACAGCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKEGKHK*KEQHLA
Trigger: TGCCAGGTGCTGTTCTTTGCACTTATGTTTGCCTTC...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR CCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTGTTCATCAATTATATTaGCACCCGTCAATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIVHQLY*HPSIFY
Trigger: ATAGAAGATTGACGGGTGCCAATATAATTGATGAAC...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CCA 90 bp TCACACAAATCCCTTAGGAATCCTTCTTCATCTTTGGGGGAAGTGCACACTAGAAACTGGATAACTTGCTaGAGAGGTTCATCAATTATA +
Preference number: 4 (lower is better)
Translates to: SHKSLRNPSSSLGEVHTRNWITC*RGSSII
Trigger: TATAATTGATGAACCTCTCCAGCAAGTTATCCAGTT...TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATTCCTAAGGGATTTGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp CCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAAAACTGGATAACTTGCTaGAGAGGTTCATCAATTATA +
Preference number: 4 (lower is better)
Translates to: PGQNEHQLHRVECHLFCKNWITC*RGSSII
Trigger: TATAATTGATGAACCTCTCCAGCAAGTTATCCAGTT...TTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR CCA 90 bp ATAACTCCCCAAATGGTATTCAAAATGTGGAGTGTGATGGAGTATGTTAGTGTGGGGTGGAAACAGAAGTaGATAGATGTAATAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ITPQMVFKMWSVMEYVSVGWKQK*IDVIEP
Trigger: AGGCTCTATTACATCTATCCACTTCTGTTTCCACCC...CACACTAACATACTCCATCACACTCCACATTTTGAATACCATTTGGGGAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CCA 90 bp CCAACTGTGAGCTGGAGTAGGCAAACAATTGTGTACATCTCTTCCTATTTCCATAAAATCAAGTATTTCTaGAAAACGCACTGGACTGAC +
Preference number: 4 (lower is better)
Translates to: PTVSWSRQTIVYISSYFHKIKYF*KTHWTD
Trigger: GTCAGTCCAGTGCGTTTTCCAGAAATACTTGATTTT...ATGGAAATAGGAAGAGATGTACACAATTGTTTGCCTACTCCAGCTCACAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CCA 90 bp TTCCATCCTTCAGAGTCCTTGAAGAACTACTTTGTTAACGGTGTCAAAAACTCAGAGCACTGTTTACAATaGGTGTTTGGACAATGGCAA +
Preference number: 4 (lower is better)
Translates to: FHPSESLKNYFVNGVKNSEHCLQ*VFGQWQ
Trigger: TTGCCATTGTCCAAACACCCATTGTAAACAGTGCTC...TGAGTTTTTGACACCGTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGATGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CCA 90 bp TTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATCATCTTTCGCATGATCTTGTTCTaGAAATCTCCAGGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: FKEGIYKIFCCTFHLIIFRMILF*KSPGGS
Trigger: GCTACCTCCTGGAGATTTCCAGAACAAGATCATGCG...AAAGATGATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTAAAGATTTCAGGGGTTaGATCTTCATGATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GADTTVFELSPRRSVHTIKDFRG*IFMIQS
Trigger: ACTTTGAATCATGAAGATCCAACCCCTGAAATCTTT...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAATTCATATATACACTCTaGCACTTTGTCATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKFIYTL*HFVIAG
Trigger: TCCAGCAATGACAAAGTGCCAGAGTGTATATATGAA...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp TTCCATCCTTCAGAGTCCTTGAAGAACTACTTTGTTAACGGTGTCAAAAACTCACTTAAAGTTAATGTATaGGTACCCCCTACCATAGTC +
Preference number: 4 (lower is better)
Translates to: FHPSESLKNYFVNGVKNSLKVNV*VPPTIV
Trigger: GACTATGGTAGGGGGTACTCATACATTAACTTTAAG...TGAGTTTTTGACACCGTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGATGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR TCA 90 bp ATAACTCCCCAAATGGTATTCAAAATGTGGAGTGTGATGGAGTATGTTAGTGTGATCCTTCAGAGTCCTTaGAGAACTACTTTGTTAACG +
Preference number: 4 (lower is better)
Translates to: ITPQMVFKMWSVMEYVSVILQSP*RTTLLT
Trigger: CGTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGAT...CACACTAACATACTCCATCACACTCCACATTTTGAATACCATTTGGGGAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR TCA 90 bp CTCTTGGAGATGCCTTTTCTGATAAATACTGTTCATAAATTCCAACAGCAGCTGTTCATTTCACTCCACTaGGCAGGGACTTTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: LLEMPFLINTVHKFQQQLFISLH*AGTLFY
Trigger: ATAAAACAAAGTCCCTGCTCAGTGGAGTGAAATGAA...CAGCTGCTGTTGGAATTTATGAACAGTATTTATCAGAAAAGGCATCTCCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR TCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCTCTGTTGAGCCTTTCTaGATACTCGTAAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCSVEPF*ILVSVC
Trigger: GCACACACTTACGAGTATTCAGAAAGGCTCAACAGA...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCACAAACGCCTGTGTCTaGAATGTAGGCATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRITNACV*NVGMKL
Trigger: CAACTTCATGCCTACATTTCAGACACAGGCGTTTGT...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR TCA 90 bp GAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAAAAGATACAAACGCCTGTGTCTaGAATGTAGGCATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ERSSKDKFMLPVGDPLKDTNACV*NVGMKL
Trigger: CAACTTCATGCCTACATTTCAGACACAGGCGTTTGT...ATCTTTTAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp TTGCCTGACTGCAATCGCTGTATTCTTGAGTCACATACCTTCTTTACGAATAGTTTTCAAACTGTTCAGTaGTTCTCATGTGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LPDCNRCILESHTFFTNSFQTVQ*FSCGSH
Trigger: ATGACTTCCACATGAGAATCACTGAACAGTTTGAAA...ACTATTCGTAAAGAAGGTATGTGACTCAAGAATACAGCGATTGCAGTCAGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAACTCTTTCTCCAGACCTaGAAGAGATGTTTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKLFLQT*KRCFKD
Trigger: ATCCTTGAAACATCTCTTTCAGGTCTGGAGAAAGAG...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCTTTAAAGGTATACACTaGGGGGTCTTGCCTACTAGC +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCFKGIH*GVLPTS
Trigger: GCTAGTAGGCAAGACCCCTCAGTGTATACCTTTAAA...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCGGCAGGGAGACACCCTaGGAAGAAGAAATACTATTT +
Preference number: 4 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRIGRETP*EEEILF
Trigger: AAATAGTATTTCTTCTTCTCAGGGTGTCTCCCTGCC...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR TCA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGAGCATATACTGTGTCTaGAATGTAGGCATGAAGTTG +
Preference number: 4 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQSIYCV*NVGMKL
Trigger: CAACTTCATGCCTACATTTCAGACACAGTATATGCT...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR GCA 90 bp ATTTTAGTCATTCCCTCTGCCAAGCTATCAGGAAGGGATTTAACTGCATTTGAAATACTCGTAAGTGTGTaGCAAAGTCATCTACAATGC +
Preference number: 4 (lower is better)
Translates to: ILVIPSAKLSGRDLTAFEILVSV*QSHLQC
Trigger: GCATTGTAGATGACTTTGGCACACACTTACGAGTAT...TTCAAATGCAGTTAAATCCCTTCCTGATAGCTTGGCAGAGGGAATGACTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR GCA 90 bp AAAAATTGTAGTGCAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAAGTTTCCCAAAGTTTaGTGCAAGTTTCACAGTATT +
Preference number: 4 (lower is better)
Translates to: KNCSATLSTRMLSRGTVQKFPKV*CKFHSI
Trigger: AATACTGTGAAACTTGCAGCAAACTTTGGGAAACTT...TTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTGCACTACAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCCATGCGCACATAAAGTaGATTCTGTCTGAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRIHAHIK*ILSEGR
Trigger: CCTTCCTTCAGACAGAATGCACTTTATGTGCGCATG...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp GAAATCCTGCATAGAAGGGATGTGAATACTTCTAAGATGGATAAAATGGACAGTCAAGCTCAGCTAACATaGGCACATAAAGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: EILHRRDVNTSKMDKMDSQAQLT*AHKVHS
Trigger: AGAATGCACTTTATGTGCGCATGTTAGCTGAGCTTG...ACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAATAATGCATATGTCTTaGCATGATCATTACAAACGC +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKIMHMS*HDHYKR
Trigger: GCGTTTGTAATGATCATGGCAAGACATATGCATTAT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAACAGGAAGTTTCAATATaGTTGAGAGACTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKQEVSI*LRDFQT
Trigger: AGTTTGAAAGTCTCTCAAGCATATTGAAACTTCCTG...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp TTTATGCTTCCTGTAGGAGACCCATTAAAAGATTCTCCATCCCCATCATCGGATCAGGAAGTTTCAATATaGTTGAGAGACTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: FMLPVGDPLKDSPSPSSDQEVSI*LRDFQT
Trigger: AGTTTGAAAGTCTCTCAAGCATATTGAAACTTCCTG...ATCCGATGATGGGGATGGAGAATCTTTTAATGGGTCTCCTACAGGAAGCATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAACATTCCTCATTGAATTaGGAAGTGGATTTACAAAAG +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKHSSLN*EVDLQK
Trigger: CTTTTGTAAATCCACTTCGCAATTCAATGAGGAATG...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAAAAGATTTTAGTCATTCCCTCTaGCAAGCTATCAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: ERSSKDKFMLPVGDPLKDFSHSL*QAIRKG
Trigger: TCCCTTCCTGATAGCTTGGCAGAGGGAATGACTAAA...ATCTTTTAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR GCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCTTTAGTCATTCCCTCTaGCAAGCTATCAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCFSHSL*QAIRKG
Trigger: TCCCTTCCTGATAGCTTGGCAGAGGGAATGACTAAA...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GAAATCCTGCATAGAAGGGATGTGAATACTTCTAAGATGGATAAAATGGACAGTGCCATTTGGCCAAAATaGATCTCTGAAACGTTTCAC +
Preference number: 4 (lower is better)
Translates to: EILHRRDVNTSKMDKMDSAIWPK*ISETFH
Trigger: GTGAAACGTTTCAGAGATGCATTTTGGCCAAATGGC...ACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CCA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCTCCCTCAAGGAAAACTaGATAACTTGCTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRISLKEN*ITCWRG
Trigger: ACCTCTCCAGCAAGTTATCCAGTTTTCCTTGAGGGA...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CCA 90 bp ATAACTCCCCAAATGGTATTCAAAATGTGGAGTGTGATGGAGTATGTTAGTGTGGGCAGAATATTTTCCTaGAAAAGGTGCCTTATGTCA +
Preference number: 4 (lower is better)
Translates to: ITPQMVFKMWSVMEYVSVGRIFS*KRCLMS
Trigger: TGACATAAGGCACCTTTTCCAGGAAAATATTCTGCC...CACACTAACATACTCCATCACACTCCACATTTTGAATACCATTTGGGGAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CCA 90 bp ATAACTCCCCAAATGGTATTCAAAATGTGGAGTGTGATGGAGTATGTTAGTGTGATACAACTCCAAGGGTaGAAACAGAAGTGGATAGAT +
Preference number: 4 (lower is better)
Translates to: ITPQMVFKMWSVMEYVSVIQLQG*KQKWID
Trigger: ATCTATCCACTTCTGTTTCCACCCTTGGAGTTGTAT...CACACTAACATACTCCATCACACTCCACATTTTGAATACCATTTGGGGAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CCA 90 bp CTTCAACTTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATATCCTTCTTCATCTTTaGGGGAAGTGCACACTAGAT +
Preference number: 4 (lower is better)
Translates to: LQLQRRYLQDLLLYLSLDILLHL*GKCTLD
Trigger: ATCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGAT...ATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAAGTTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAAAAGATTTCAGGGGTTaGATCTTCATGATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKKDFRG*IFMIQS
Trigger: ACTTTGAATCATGAAGATCCAACCCCTGAAATCTTT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
3UTR CAA 72 bp GCTGCCTTATCTCTGACTGCTTCTAGCTCTCCAATATaGTCACTCAATTTAATAATGTTCATAAAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AALSLTASSSPI*SLNLIMFIKAS
Trigger: TGAGGCCTTTATGAACATTATTAAATTGAGTGACAATATTGGAGAGCTAGAAGCAGTCAGAGATAAGGCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTTCAAAATGTGGAGTGTaGTGGAGTATGTTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFSKCGV*WSMLVC
Trigger: ACACACTAACATACTCCATCACACTCCACATTTTGA...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR TCA 90 bp GAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAAAAGATCCAGTCTATTTCTTTTaGCCTTTCTGGACCTTAGCT +
Preference number: 4 (lower is better)
Translates to: ERSSKDKFMLPVGDPLKDPVYFF*PFWTLA
Trigger: AGCTAAGGTCCAGAAAGGTCAAAAGAAATAGACTGG...ATCTTTTAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR TCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAGGCATGAAGTTGTACTaGGTCATCAGAAGAAACATT +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKGMKLY*VIRRNI
Trigger: AATGTTTCTTCTGATGACTCAGTACAACTTCATGCC...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp CTCTTGGAGATGCCTTTTCTGATAAATACTGTTCATAAATTCCAACAGCAGCTGTTTCAAACTGTTCAGTaGTTCTCATGTGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LLEMPFLINTVHKFQQQLFQTVQ*FSCGSH
Trigger: ATGACTTCCACATGAGAATCACTGAACAGTTTGAAA...CAGCTGCTGTTGGAATTTATGAACAGTATTTATCAGAAAAGGCATCTCCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCTTTGCCCATGTTGTCTaGCATTTTAGTCATTCCCTC +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCFAHVV*HFSHSL
Trigger: GAGGGAATGACTAAAATGTCAGACAACATGGGCAAA...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCAGACACAACAGTATTTaGGTTAAGCCCCAGAAGATC +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCRHNSI*VKPQKI
Trigger: GATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCT...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCCTCTTTCTCCAGACCTaGAAGAGATGTTTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCLFLQT*KRCFKD
Trigger: ATCCTTGAAACATCTCTTTCAGGTCTGGAGAAAGAG...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp GAAATCCTGCATAGAAGGGATGTGAATACTTCTAAGATGGATAAAATGGACAGTGGTCAATGGCACAATTaGTTTCAGCAACTATTTGGA +
Preference number: 4 (lower is better)
Translates to: EILHRRDVNTSKMDKMDSGQWHN*FQQLFG
Trigger: TCCAAATAGTTGCTGAAATCAATTGTGCCATTGACC...ACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR TCA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGCTGATTAAGAACATATaGGAAATGCCTAGTACAGTG +
Preference number: 4 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQLIKNI*EMPSTV
Trigger: CACTGTACTAGGCATTTCTCATATGTTCTTAATCAG...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR GCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATACTCGTAAGTGTGTaGCAAAGTCATCTACAATGC +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKILVSV*QSHLQC
Trigger: GCATTGTAGATGACTTTGGCACACACTTACGAGTAT...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp TTCTCATGTGGAAGTCATGGAAGTCACTATAACGACGATAGGTTTTCCACATCTATAATGCATATGTCTTaGCATGATCATTACAAACGC +
Preference number: 4 (lower is better)
Translates to: FSCGSHGSHYNDDRFSTSIMHMS*HDHYKR
Trigger: GCGTTTGTAATGATCATGGCAAGACATATGCATTAT...AGATGTGGAAAACCTATCGTCGTTATAGTGACTTCCATGACTTCCACATGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp GATCTAAGTGAAAACAAGACAGTGATATCTTGTTCCAATCTTAAAGCTCCCAAACAGCCTCTGCTAAAATaGCATTTGGCCAAAATGCAT +
Preference number: 4 (lower is better)
Translates to: DLSENKTVISCSNLKAPKQPLLK*HLAKMH
Trigger: ATGCATTTTGGCCAAATGGCATTTTAGCAGAGGCTG...TTTGGGAGCTTTAAGATTGGAACAAGATATCACTGTCTTGTTTTCACTTAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp CTTCAACTTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATGAATACTTTTATCTCTaGATGGAACAGCCTCTGCTA +
Preference number: 4 (lower is better)
Translates to: LQLQRRYLQDLLLYLSLDEYFYL*MEQPLL
Trigger: TAGCAGAGGCTGTTCCATGCAGAGATAAAAGTATTC...ATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAAGTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR GCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGAGAGCCACCACATaGTTCTTTTTGCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKMRATT*FFLHKE
Trigger: TTCTTTGTGCAAAAAGAAGCATGTGGTGGCTCTCAT...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GAAATCCTGCATAGAAGGGATGTGAATACTTCTAAGATGGATAAAATGGACAGTAATTTCGAAAGTTCTTaGCTAAAGGCACCACTGACT +
Preference number: 4 (lower is better)
Translates to: EILHRRDVNTSKMDKMDSNFESS*LKAPLT
Trigger: AGTCAGTGGTGCCTTTAGGCAAGAACTTTCGAAATT...ACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAGGGGAGACTTTCAGATaGGATAACAAAGAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKGETFR*DNKEKF
Trigger: GAACTTTTCTTTGTTATCGCATCTGAAAGTCTCCCC...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR CCA 90 bp GAGAAGCAGCATTACCCTAAGTGGAATATTGTCATCCACATTATCGTCAAGTTGAAAGATTTCAGGGGTTaGATCTTCATGATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: EKQHYPKWNIVIHIIVKLKDFRG*IFMIQS
Trigger: ACTTTGAATCATGAAGATCCAACCCCTGAAATCTTT...CAACTTGACGATAATGTGGATGACAATATTCCACTTAGGGTAATGCTGCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CCA 90 bp TTCTCATGTGGAAGTCATGGAAGTCACTATAACGACGATAGGTTTTCCACATCTAAAGATTTCAGGGGTTaGATCTTCATGATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: FSCGSHGSHYNDDRFSTSKDFRG*IFMIQS
Trigger: ACTTTGAATCATGAAGATCCAACCCCTGAAATCTTT...AGATGTGGAAAACCTATCGTCGTTATAGTGACTTCCATGACTTCCACATGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp ATTTTAGTCATTCCCTCTGCCAAGCTATCAGGAAGGGATTTAACTGCATTTGAACAGCATTACCCTAAGTaGAATATTGTCATCCACATT +
Preference number: 4 (lower is better)
Translates to: ILVIPSAKLSGRDLTAFEQHYPK*NIVIHI
Trigger: AATGTGGATGACAATATTCCACTTAGGGTAATGCTG...TTCAAATGCAGTTAAATCCCTTCCTGATAGCTTGGCAGAGGGAATGACTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CCA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGCAGCATTACCCTAAGTaGAATATTGTCATCCACATT +
Preference number: 4 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQQHYPK*NIVIHI
Trigger: AATGTGGATGACAATATTCCACTTAGGGTAATGCTG...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR CCA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGCTGATTAGTTTGAAATaGAAGAAACCAACGCCATTC +
Preference number: 4 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQLISLK*KKPTPF
Trigger: GAATGGCGTTGGTTTCTTCCATTTCAAACTAATCAG...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR CCA 90 bp GAAATCCTGCATAGAAGGGATGTGAATACTTCTAAGATGGATAAAATGGACAGTTTAATACCAGGATCTTaGCTCAGTGGTCTGATAAGT +
Preference number: 4 (lower is better)
Translates to: EILHRRDVNTSKMDKMDSLIPGS*LSGLIS
Trigger: ACTTATCAGACCACTGAGCCAAGATCCTGGTATTAA...ACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CCA 90 bp GAAATCCTGCATAGAAGGGATGTGAATACTTCTAAGATGGATAAAATGGACAGTACCAAGTGCATCCATTaGTCAATGGCACAATTGATT +
Preference number: 4 (lower is better)
Translates to: EILHRRDVNTSKMDKMDSTKCIH*SMAQLI
Trigger: AATCAATTGTGCCATTGACCAATGGATGCACTTGGT...ACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CCA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGGCAAAGAACAGCACCTaGCACATAATAACTTTCAAT +
Preference number: 4 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQAKNST*HIITFN
Trigger: ATTGAAAGTTATTATGTGCCAGGTGCTGTTCTTTGC...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR CCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCTTCCCTTTAAGGAAGTaGCAGGTAAAGGAGACTTTC +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCFPLRK*QVKETF
Trigger: GAAAGTCTCCTTTACCTGCCACTTCCTTAAAGGGAA...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
3UTR CAA 72 bp CTTCAACCAGCTGCGAGTAATTCCAAAGCAAGTGACTaGGTTTTCATAGAAACTACCTTGTCATATTCATAT +
Preference number: 4 (lower is better)
Translates to: LQPAASNSKASD*VFIETTLSYSY
Trigger: ATATGAATATGACAAGGTAGTTTCTATGAAAACCAAGTCACTTGCTTTGGAATTACTCGCAGCTGGTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409604.1
3UTR CAA 72 bp AGGGATTTAACTGCATTTGAAACATTCCTCATTGAATaGCGAAGTGGATTTACAAAAGTGTCCATCTTGCGA +
Preference number: 4 (lower is better)
Translates to: RDLTAFETFLIE*RSGFTKVSILR
Trigger: TCGCAAGATGGACACTTTTGTAAATCCACTTCGCAATTCAATGAGGAATGTTTCAAATGCAGTTAAATCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
3UTR CAA 72 bp AATCATTATGCCAAACAAACTCCTCCAAGTCGTACATaGCACAGTCTCCAACTGTTAAACAAATTAGCCAAT +
Preference number: 4 (lower is better)
Translates to: NHYAKQTPPSRT*HSLQLLNKLAN
Trigger: ATTGGCTAATTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGCATAATGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
3UTR CAA 72 bp AACTGGATAACTTGCTGGAGAGGTTCATCAATTATATaGGCACCCGTCAATCTTCTATCAATCTTAATAGTC +
Preference number: 4 (lower is better)
Translates to: NWITCWRGSSII*APVNLLSILIV
Trigger: GACTATTAAGATTGATAGAAGATTGACGGGTGCCAATATAATTGATGAACCTCTCCAGCAAGTTATCCAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444712.5
CDS-3UTR TCA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTTGCATGCAGAGTCCTTaGAGACTTTCAAATTTCATA +
Preference number: 4 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFCMQSP*RLSNFI
Trigger: TATGAAATTTGAAAGTCTTCAAGGACTCTGCATGCA...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR TCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCCAATCGCTGTATTCTTaGGTCACATACCTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCQSLYS*VTYLLY
Trigger: GTAAAGAAGGTATGTGACTCAAGAATACAGCGATTG...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCGGGGTTGGATCTTCATaGTTCAAAGTATCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRIGVGSS*FKVSAN
Trigger: ATTAGCAGATACTTTGAATCATGAAGATCCAACCCC...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR TCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCGGGGTTGGATCTTCATaGTTCAAAGTATCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCGVGSS*FKVSAN
Trigger: ATTAGCAGATACTTTGAATCATGAAGATCCAACCCC...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCGGCATGAAGTTGTACTaGGTCATCAGAAGAAACATT +
Preference number: 4 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRIGMKLY*VIRRNI
Trigger: AATGTTTCTTCTGATGACTCAGTACAACTTCATGCC...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR TCA 90 bp TTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATCATCTTTGGCATGAAGTTGTACTaGGTCATCAGAAGAAACATT +
Preference number: 4 (lower is better)
Translates to: FKEGIYKIFCCTFHLIIFGMKLY*VIRRNI
Trigger: AATGTTTCTTCTGATGACTCAGTACAACTTCATGCC...AAAGATGATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCGGCATGAAGTTGTACTaGGTCATCAGAAGAAACATT +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCGMKLY*VIRRNI
Trigger: AATGTTTCTTCTGATGACTCAGTACAACTTCATGCC...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp GATCTAAGTGAAAACAAGACAGTGATATCTTGTTCCAATCTTAAAGCTCCCAAATCTCTAATTTTAGCATaGCCACAGCTCTTTCTGATG +
Preference number: 4 (lower is better)
Translates to: DLSENKTVISCSNLKAPKSLILA*PQLFLM
Trigger: CATCAGAAAGAGCTGTGGTCATGCTAAAATTAGAGA...TTTGGGAGCTTTAAGATTGGAACAAGATATCACTGTCTTGTTTTCACTTAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCATACTCGTAAGTGTGTaGCAAAGTCATCTACAATGC +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCILVSV*QSHLQC
Trigger: GCATTGTAGATGACTTTGGCACACACTTACGAGTAT...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGCAGGAAGTTTCAATATaGTTGAGAGACTTTCAAACT +
Preference number: 4 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQQEVSI*LRDFQT
Trigger: AGTTTGAAAGTCTCTCAAGCATATTGAAACTTCCTG...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR GCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAATGCTTTGACCGTGAATaGAGTTTGTTGAAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKCFDRE*SLLKSS
Trigger: TGAACTTTTCAACAAACTGCATTCACGGTCAAAGCA...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAACCTACAAAATCATTATaGCAAACAAACTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKPTKSL*QTNSSK
Trigger: CTTGGAGGAGTTTGTTTGGCATAATGATTTTGTAGG...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCATGAGAGCCACCACATaGTTCTTTTTGCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCMRATT*FFLHKE
Trigger: TTCTTTGTGCAAAAAGAAGCATGTGGTGGCTCTCAT...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGTTAATTTGCTATTTCTaGAGTTACCTAAGGCATGTC +
Preference number: 4 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQLICYF*SYLRHV
Trigger: GACATGCCTTAGGTAACTGCAGAAATAGCAAATTAA...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR GCA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCTACACTGAGGGGTCTTaGCTACTAGCTTTATTTTGT +
Preference number: 4 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRIYTEGS*LLALFC
Trigger: ACAAAATAAAGCTAGTAGGCAAGACCCCTCAGTGTA...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CCA 90 bp TTCCATCCTTCAGAGTCCTTGAAGAACTACTTTGTTAACGGTGTCAAAAACTCAAACTGGATAACTTGCTaGAGAGGTTCATCAATTATA +
Preference number: 4 (lower is better)
Translates to: FHPSESLKNYFVNGVKNSNWITC*RGSSII
Trigger: TATAATTGATGAACCTCTCCAGCAAGTTATCCAGTT...TGAGTTTTTGACACCGTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGATGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CCA 90 bp TTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATCATCTTTGCACTTTGTCATTGCTaGAGAATGCTGATTAGTTTG +
Preference number: 4 (lower is better)
Translates to: FKEGIYKIFCCTFHLIIFALCHC*RMLISL
Trigger: CAAACTAATCAGCATTCTCCAGCAATGACAAAGTGC...AAAGATGATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAATTCATATATACACTCTaGCACTTTGTCATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKFIYTL*HFVIAG
Trigger: TCCAGCAATGACAAAGTGCCAGAGTGTATATATGAA...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp TTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATCATCTTTGCTGTACCTTTCACTTaGTCATCTTTCTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: FKEGIYKIFCCTFHLIIFAVPFT*SSFSVI
Trigger: AATAACAGAGAAAGATGATCAAGTGAAAGGTACAGC...AAAGATGATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCGCTGTACCTTTCACTTaGTCATCTTTCTCTGTTATT +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCAVPFT*SSFSVI
Trigger: AATAACAGAGAAAGATGATCAAGTGAAAGGTACAGC...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR TCA 90 bp ACATTTGAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAATTTATTTCTTTGCCTaGCTGCAATCGCTGTATTCT +
Preference number: 4 (lower is better)
Translates to: TFERSSKDKFMLPVGDPLIYFFA*LQSLYS
Trigger: AGAATACAGCGATTGCAGTCAGGCAAAGAAATAAAT...TAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTCAAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR TCA 90 bp GATCTAAGTGAAAACAAGACAGTGATATCTTGTTCCAATCTTAAAGCTCCCAAATTTCAAACTGTTCAGTaGTTCTCATGTGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: DLSENKTVISCSNLKAPKFQTVQ*FSCGSH
Trigger: ATGACTTCCACATGAGAATCACTGAACAGTTTGAAA...TTTGGGAGCTTTAAGATTGGAACAAGATATCACTGTCTTGTTTTCACTTAGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp GATCTAAGTGAAAACAAGACAGTGATATCTTGTTCCAATCTTAAAGCTCCCAAAGAAAACTGGATAACTTaGTGGAGAGGTTCATCAATT +
Preference number: 4 (lower is better)
Translates to: DLSENKTVISCSNLKAPKENWIT*WRGSSI
Trigger: AATTGATGAACCTCTCCAGCAAGTTATCCAGTTTTC...TTTGGGAGCTTTAAGATTGGAACAAGATATCACTGTCTTGTTTTCACTTAGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCGGAGCTAACAGTAACTaGAAATATGCATTTAGATCC +
Preference number: 4 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRIGANSN*KYAFRS
Trigger: GGATCTAAATGCATATTTGCAGTTACTGTTAGCTCC...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCGGAGCTAACAGTAACTaGAAATATGCATTTAGATCC +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCGANSN*KYAFRS
Trigger: GGATCTAAATGCATATTTGCAGTTACTGTTAGCTCC...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GATCTAAGTGAAAACAAGACAGTGATATCTTGTTCCAATCTTAAAGCTCCCAAATGCTTTGACCGTGAATaGAGTTTGTTGAAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: DLSENKTVISCSNLKAPKCFDRE*SLLKSS
Trigger: TGAACTTTTCAACAAACTGCATTCACGGTCAAAGCA...TTTGGGAGCTTTAAGATTGGAACAAGATATCACTGTCTTGTTTTCACTTAGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR GCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAATTCTGTTTATATTTCTaGATCTGCTTTGACCGTGAA +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKFCLYF*ICFDRE
Trigger: TTCACGGTCAAAGCAGATGCAGAAATATAAACAGAA...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp ACATTTGAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTACCTACAAAATCATTATaGCAAACAAACTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TFERSSKDKFMLPVGDPLPTKSL*QTNSSK
Trigger: CTTGGAGGAGTTTGTTTGGCATAATGATTTTGTAGG...TAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTCAAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CCA 90 bp TTCATATACCTTTCTTTGAATGTCATCAAAGATTTCAGGGGTTGGATCTTCATGCCCATATGGATAGACTaGCCTCAGTTAACATTATTA +
Preference number: 4 (lower is better)
Translates to: FIYLSLNVIKDFRGWIFMPIWID*PQLTLL
Trigger: TAATAATGTTAACTGAGGCCAGTCTATCCATATGGG...CATGAAGATCCAACCCCTGAAATCTTTGATGACATTCAAAGAAAGGTATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAGTTCATCAATTATATTaGCACCCGTCAATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKVHQLY*HPSIFY
Trigger: ATAGAAGATTGACGGGTGCCAATATAATTGATGAAC...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CCA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTGTTCATCAATTATATTaGCACCCGTCAATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFVHQLY*HPSIFY
Trigger: ATAGAAGATTGACGGGTGCCAATATAATTGATGAAC...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CCA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTATGGTATTCAAAATGTaGAGTGTGATGGAGTATGTT +
Preference number: 4 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFMVFKM*SVMEYV
Trigger: AACATACTCCATCACACTCCACATTTTGAATACCAT...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCCAGCATTACCCTAAGTaGAATATTGTCATCCACATT +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCQHYPK*NIVIHI
Trigger: AATGTGGATGACAATATTCCACTTAGGGTAATGCTG...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CCA 90 bp TTCATATACCTTTCTTTGAATGTCATCAAAGATTTCAGGGGTTGGATCTTCATGTTCATATATACACTCTaGCACTTTGTCATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: FIYLSLNVIKDFRGWIFMFIYTL*HFVIAG
Trigger: TCCAGCAATGACAAAGTGCCAGAGTGTATATATGAA...CATGAAGATCCAACCCCTGAAATCTTTGATGACATTCAAAGAAAGGTATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CCA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATCTACAAAAACCCCTaGCATAGTAACTATACCATA +
Preference number: 4 (lower is better)
Translates to: PERDVSRIIHLANPQYIKIYKNP*HSNYTI
Trigger: TATGGTATAGTTACTATGCCAGGGGTTTTTGTAGAT...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611725.4
3UTR CAA 72 bp AGGCTAACCAAGTGCATCCATTGGTCAATGGCACAATaGATTTCAGCAACTATTTGGAATATCCTAATTATA +
Preference number: 4 (lower is better)
Translates to: RLTKCIHWSMAQ*ISATIWNILII
Trigger: TATAATTAGGATATTCCAAATAGTTGCTGAAATCAATTGTGCCATTGACCAATGGATGCACTTGGTTAGCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
3UTR CAA 72 bp TATTTATTTCTTTGCCTGACTGCAATCGCTGTATTCTaGAGTCACATACCTTCTTTACGAATAGTAAGCTAT +
Preference number: 4 (lower is better)
Translates to: YLFLCLTAIAVF*SHIPSLRIVSY
Trigger: ATAGCTTACTATTCGTAAAGAAGGTATGTGACTCAAGAATACAGCGATTGCAGTCAGGCAAAGAAATAAATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
3UTR CAA 72 bp TTATATTTCTGCATCTGCTTTGACCGTGAATGCAGTTaGTTGAAAAGTTCACGGAATTTATACTGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LYFCICFDRECS*LKSSRNLYCGN
Trigger: ATTTCCACAGTATAAATTCCGTGAACTTTTCAACAAACTGCATTCACGGTCAAAGCAGATGCAGAAATATAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
3UTR CAA 72 bp TTCACATCACTTAAAGCCAAGTCAGAATACCAACTGTaGCTTAGTAGCTATAAACCTTGGATAGGTTATTTA +
Preference number: 4 (lower is better)
Translates to: FTSLKAKSEYQL*LSSYKPWIGYL
Trigger: TAAATAACCTATCCAAGGTTTATAGCTACTAAGCAACAGTTGGTATTCTGACTTGGCTTTAAGTGATGTGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR GCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCAAGTTTCCCAAAGTTTaGTGCAAGTTTCACAGTATT +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCKFPKV*CKFHSI
Trigger: AATACTGTGAAACTTGCAGCAAACTTTGGGAAACTT...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp GAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAAAAGATAAGTTTCCCAAAGTTTaGTGCAAGTTTCACAGTATT +
Preference number: 4 (lower is better)
Translates to: ERSSKDKFMLPVGDPLKDKFPKV*CKFHSI
Trigger: AATACTGTGAAACTTGCAGCAAACTTTGGGAAACTT...ATCTTTTAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR GCA 90 bp ACATTTGAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTACATTCCTCATTGAATTaGGAAGTGGATTTACAAAAG +
Preference number: 4 (lower is better)
Translates to: TFERSSKDKFMLPVGDPLHSSLN*EVDLQK
Trigger: CTTTTGTAAATCCACTTCGCAATTCAATGAGGAATG...TAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTCAAATGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR GCA 90 bp TTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATCATCTTTATCTTTCTGACATTTTaGCCATGTTGTCTGACATTT +
Preference number: 4 (lower is better)
Translates to: FKEGIYKIFCCTFHLIIFIFLTF*PCCLTF
Trigger: AAATGTCAGACAACATGGGCAAAATGTCAGAAAGAT...AAAGATGATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR GCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCATCTTTCTGACATTTTaGCCATGTTGTCTGACATTT +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCIFLTF*PCCLTF
Trigger: AAATGTCAGACAACATGGGCAAAATGTCAGAAAGAT...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR GCA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCTTAATTTGCTATTTCTaGAGTTACCTAAGGCATGTC +
Preference number: 4 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCLICYF*SYLRHV
Trigger: GACATGCCTTAGGTAACTGCAGAAATAGCAAATTAA...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CCA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCGTTCATCAATTATATTaGCACCCGTCAATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRIVHQLY*HPSIFY
Trigger: ATAGAAGATTGACGGGTGCCAATATAATTGATGAAC...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CCA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCAACTGGATAACTTGCTaGAGAGGTTCATCAATTATA +
Preference number: 4 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRINWITC*RGSSII
Trigger: TATAATTGATGAACCTCTCCAGCAAGTTATCCAGTT...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS CCA 90 bp TGCTCCTTCAGTCTTCTCCCGGGCGGCGGTTTTACTCGGCTTCGCTaGCCTCCCCTCGGCCCGGTCGCTCGCGACGGACGCGCCGCCATC +
Preference number: 5 (lower is better)
Translates to: CSFSLLPGGGFTRLR*PPLGPVARDGRAAI
Trigger: GATGGCGGCGCGTCCGTCGCGAGCGACCGGGCCGAGGGGAGGCCAGCGAAGCCGAGTAAAACCGCCGCCCGGGAGAAGACTGAAGGAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409604.1
ENST00000428135.7
ENST00000444712.5
ENST00000471744.1
ENST00000474067.5
ENST00000475800.5
CDS GCA 90 bp GTAGCAGCAGCGAAAACTGCTCGGGCCGCCGCCAACGGCGGCAACTaGTCCTTCAGTCTTCTCCCGGGCGGCGGTTTTACTCGGCTTCGC +
Preference number: 5 (lower is better)
Translates to: VAAAKTARAAANGGN*SFSLLPGGGFTRLR
Trigger: GCGAAGCCGAGTAAAACCGCCGCCCGGGAGAAGACTGAAGGAGCAGTTGCCGCCGTTGGCGGCGGCCCGAGCAGTTTTCGCTGCTGCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000409076.6
ENST00000409604.1
ENST00000428135.7
ENST00000444712.5
ENST00000471744.1
ENST00000474067.5
ENST00000475800.5
ENST00000611725.4
CDS GCA 90 bp TCCCTAGCCTCGCCTCATGGCAACAGCCGTAGCAGCAGCGAAAACTaGTCGGGCCGCCGCCAACGGCGGCAACTGCTCCTTCAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SLASPHGNSRSSSEN*SGRRQRRQLLLQSS
Trigger: AGAAGACTGAAGGAGCAGTTGCCGCCGTTGGCGGCGGCCCGAGCAGTTTTCGCTGCTGCTACGGCTGTTGCCATGAGGCGAGGCTAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000409076.6
ENST00000409604.1
ENST00000428135.7
ENST00000444712.5
ENST00000471744.1
ENST00000474067.5
ENST00000475800.5
ENST00000482558.5
ENST00000611725.4
CDS TCA 90 bp TGCTTTCTTCCCTTACATTCTCCCAAACAGAGTCAGTCTCTCTGCTaGGTTGTGTGGAGCTGGGAGAGGGGTGACACAAGCAACCCTGTT +
Preference number: 5 (lower is better)
Translates to: CFLPLHSPKQSQSLC*VVWSWERGDTSNPV
Trigger: AACAGGGTTGCTTGTGTCACCCCTCTCCCAGCTCCACACAACTCAGCAGAGAGACTGACTCTGTTTGGGAGAATGTAAGGGAAGAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498463.5
CDS-3UTR CAA 90 bp AACGACGATAGGTTTTCCACATCTCCTCACTGTTTAGGTTGCGCCGGTGTACAGTCCTCACTGTTTAGGTaGCGCCGGTGTACAGTGATG +
Preference number: 5 (lower is better)
Translates to: NDDRFSTSPHCLGCAGVQSSLFR*RRCTVM
Trigger: CATCACTGTACACCGGCGCAACCTAAACAGTGAGGA...CTGTACACCGGCGCAACCTAAACAGTGAGGAGATGTGGAAAACCTATCGTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS CCA 90 bp ATAATCAATGGAGATAGAGGAAAGGGCCTGAGAGGGCAGCATGGCTaGAAATACCTAGCAGGGCAATCTTTGCGTGTGATGGTAGCAACA +
Preference number: 5 (lower is better)
Translates to: IINGDRGKGLRGQHG*KYLAGQSLRVMVAT
Trigger: TGTTGCTACCATCACACGCAAAGATTGCCCTGCTAGGTATTTCCAGCCATGCTGCCCTCTCAGGCCCTTTCCTCTATCTCCATTGATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS-3UTR CAA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCACACATTATCGTCAAGTaGAGCCGAAACTCGGCGATG +
Preference number: 5 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSAHIIVK*SRNSAM
Trigger: CATCGCCGAGTTTCGGCTCAACTTGACGATAATGTG...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR CAA 90 bp AATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACCCTCCAAGTCGTACATaGCACAGTCTCCAACTGTTA +
Preference number: 5 (lower is better)
Translates to: NAVQGDCAKFPKVCCKFHPPSRT*HSLQLL
Trigger: TAACAGTTGGAGACTGTGCAATGTACGACTTGGAGG...GTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS TCA 90 bp CTAAAATATGGCATGCCACTCTCTCCTGGCCTGTACAACTTCCACTaGGAAGTCTGCTGGCAAATGTACTGGAGCACCATTCCATGTTTT +
Preference number: 5 (lower is better)
Translates to: LKYGMPLSPGLYNFH*EVCWQMYWSTIPCF
Trigger: AAAACATGGAATGGTGCTCCAGTACATTTGCCAGCAGACTTCTCAGTGGAAGTTGTACAGGCCAGGAGAGAGTGGCATGCCATATTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS-3UTR CAA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTCAACGCCATTCTTGCTaGAGATGGGGGCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: GADTTVFELSPRRSVHTIQRHSC*RWGQFS
Trigger: AGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTG...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS CCA 90 bp TTATTGCAGTCTTTACAGTCTGGGCTTGTTTGTCCCAGTCCTTCTTaGGAAGGCTTTCCAGGTATTCAAAGGAACTTGGGTGTTGTGATC +
Preference number: 5 (lower is better)
Translates to: LLQSLQSGLVCPSPS*EGFPGIQRNLGVVI
Trigger: GATCACAACACCCAAGTTCCTTTGAATACCTGGAAAGCCTTCCCAAGAAGGACTGGGACAAACAAGCCCAGACTGTAAAGACTGCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS-3UTR CAA 90 bp AATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACGGTACTTCTCTGAGTTaGTTTTTCCAAACAGGAGAG +
Preference number: 5 (lower is better)
Translates to: NAVQGDCAKFPKVCCKFHGTSLS*FFQTGE
Trigger: CTCTCCTGTTTGGAAAAACAAACTCAGAGAAGTACC...GTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CAA 90 bp AATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACCTGAATGAGTGCGTTTaGAAGAGTCTGCCTAATTTC +
Preference number: 5 (lower is better)
Translates to: NAVQGDCAKFPKVCCKFHLNECV*KSLPNF
Trigger: GAAATTAGGCAGACTCTTCAAAACGCACTCATTCAG...GTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp ATTCAGGTCACACTACAGACTAATTGTATCAGATTTTCTGGAGGTGGGGTCCAGGTTTACAATGGGTGTTaGGACAATGGCAACAGGAGG +
Preference number: 5 (lower is better)
Translates to: IQVTLQTNCIRFSGGGVQVYNGC*DNGNRR
Trigger: CCTCCTGTTGCCATTGTCCAAACACCCATTGTAAAC...CTGGACCCCACCTCCAGAAAATCTGATACAATTAGTCTGTAGTGTGACCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CAA 90 bp GTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGTATTAATCCTTCTTCATCTTaGGGGGAAGTGCACACTAGA +
Preference number: 5 (lower is better)
Translates to: VQGDCAKFPKVCCKFHSINPSSS*GEVHTR
Trigger: TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATT...AATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAATCCTTCTTCATCTTaGGGGGAAGTGCACACTAGA +
Preference number: 5 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSANPSSS*GEVHTR
Trigger: TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATT...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR CAA 90 bp AACGACGATAGGTTTTCCACATCTCCTCACTGTTTAGGTTGCGCCGGTGTACAGACAGTATTTATTTCTTaGCCTGACTGCAATCGCTGT +
Preference number: 5 (lower is better)
Translates to: NDDRFSTSPHCLGCAGVQTVFIS*PDCNRC
Trigger: ACAGCGATTGCAGTCAGGCAAAGAAATAAATACTGT...CTGTACACCGGCGCAACCTAAACAGTGAGGAGATGTGGAAAACCTATCGTCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAACACATTATCGTCAAGTaGAGCCGAAACTCGGCGATG +
Preference number: 5 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKHIIVK*SRNSAM
Trigger: CATCGCCGAGTTTCGGCTCAACTTGACGATAATGTG...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAACAACGCCATTCTTGCTaGAGATGGGGGCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKQRHSC*RWGQFS
Trigger: AGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTG...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp CAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTATACACTCTGGCACTTaGTCATTGCTGGAGAATGCT +
Preference number: 5 (lower is better)
Translates to: QHCLQECCPGGLCKVSQSIHSGT*SLLENA
Trigger: AGCATTCTCCAGCAATGACAAAGTGCCAGAGTGTAT...ACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CAA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAATACACTCTGGCACTTaGTCATTGCTGGAGAATGCT +
Preference number: 5 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSAIHSGT*SLLENA
Trigger: AGCATTCTCCAGCAATGACAAAGTGCCAGAGTGTAT...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR CAA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTCCTCCAAGTCGTACATaGCACAGTCTCCAACTGTTA +
Preference number: 5 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSPPSRT*HSLQLL
Trigger: TAACAGTTGGAGACTGTGCAATGTACGACTTGGAGG...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAGGTACTTCTCTGAGTTaGTTTTTCCAAACAGGAGAG +
Preference number: 5 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSAGTSLS*FFQTGE
Trigger: CTCTCCTGTTTGGAAAAACAAACTCAGAGAAGTACC...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR CAA 90 bp GTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGTATTGGAAAACTGGATAACTaGCTGGAGAGGTTCATCAAT +
Preference number: 5 (lower is better)
Translates to: VQGDCAKFPKVCCKFHSIGKLDN*LERFIN
Trigger: ATTGATGAACCTCTCCAGCAAGTTATCCAGTTTTCC...AATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCCTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTGGAGAGGGTGATCGCTaGGCAGTAAAGGCGATCTTC +
Preference number: 5 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFGEGDR*AVKAIF
Trigger: GAAGATCGCCTTTACTGCCAAGCGATCACCCTCTCC...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CAA 90 bp GACTGCAATCGCTGTATTCTTGAGTCACATACCTTCTTTACGAATAGTAAGCTATCCTCACTGTTTAGGTaGCGCCGGTGTACAGTGATG +
Preference number: 5 (lower is better)
Translates to: DCNRCILESHTFFTNSKLSSLFR*RRCTVM
Trigger: CATCACTGTACACCGGCGCAACCTAAACAGTGAGGA...TAGCTTACTATTCGTAAAGAAGGTATGTGACTCAAGAATACAGCGATTGCAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGTCCTCACTGTTTAGGTaGCGCCGGTGTACAGTGATG +
Preference number: 5 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQSSLFR*RRCTVM
Trigger: CATCACTGTACACCGGCGCAACCTAAACAGTGAGGA...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR CAA 90 bp AACGACGATAGGTTTTCCACATCTCCTCACTGTTTAGGTTGCGCCGGTGTACAGGACATTTTGCCCATGTaGTCTGACATTTTAGTCATT +
Preference number: 5 (lower is better)
Translates to: NDDRFSTSPHCLGCAGVQDILPM*SDILVI
Trigger: AATGACTAAAATGTCAGACAACATGGGCAAAATGTC...CTGTACACCGGCGCAACCTAAACAGTGAGGAGATGTGGAAAACCTATCGTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CAA 90 bp GAGAAGCAGCATTACCCTAAGTGGAATATTGTCATCCACATTATCGTCAAGTTGCACATTATCGTCAAGTaGAGCCGAAACTCGGCGATG +
Preference number: 5 (lower is better)
Translates to: EKQHYPKWNIVIHIIVKLHIIVK*SRNSAM
Trigger: CATCGCCGAGTTTCGGCTCAACTTGACGATAATGTG...CAACTTGACGATAATGTGGATGACAATATTCCACTTAGGGTAATGCTGCTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CAA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTCTGCAAAGAAGGCGCTaGAGTAGTTTGAAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSLQRRR*SSLKFL
Trigger: CAGAAACTTCAAACTACTCAAGCGCCTTCTTTGCAG...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp CCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAACTGCAAAGAAGGCGCTaGAGTAGTTTGAAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: PGQNEHQLHRVECHLFCKLQRRR*SSLKFL
Trigger: CAGAAACTTCAAACTACTCAAGCGCCTTCTTTGCAG...TTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR CAA 90 bp TCGGCTACTTGTTCAGGTGAAGTCATCCAGTCAACATGGTCAACTATTTTTCTAAAACCAACGCCATTCTaGCTTGAGATGGGGGCAGTT +
Preference number: 5 (lower is better)
Translates to: SATCSGEVIQSTWSTIFLKPTPF*LEMGAV
Trigger: AACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTT...TAGAAAAATAGTTGACCATGTTGACTGGATGACTTCACCTGAACAAGTAGCCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS CCA 90 bp TCCTCTGATAATACTTTGCTGAAGTTCCTAATCCACACTAAAATATaGCATGCCACTCTCTCCTGGCCTGTACAACTTCCACTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: SSDNTLLKFLIHTKI*HATLSWPVQLPLRS
Trigger: ACTTCTCAGTGGAAGTTGTACAGGCCAGGAGAGAGTGGCATGCCATATTTTAGTGTGGATTAGGAACTTCAGCAAAGTATTATCAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS-3UTR CAA 90 bp CAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTGGTTCATCAATTATATaGGCACCCGTCAATCTTCTA +
Preference number: 5 (lower is better)
Translates to: QHCLQECCPGGLCKVSQSGSSII*APVNLL
Trigger: TAGAAGATTGACGGGTGCCAATATAATTGATGAACC...ACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp ATTCAGGTCACACTACAGACTAATTGTATCAGATTTTCTGGAGGTGGGGTCCAGCTGAATGAGTGCGTTTaGAAGAGTCTGCCTAATTTC +
Preference number: 5 (lower is better)
Translates to: IQVTLQTNCIRFSGGGVQLNECV*KSLPNF
Trigger: GAAATTAGGCAGACTCTTCAAAACGCACTCATTCAG...CTGGACCCCACCTCCAGAAAATCTGATACAATTAGTCTGTAGTGTGACCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CAA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTCTGAATGAGTGCGTTTaGAAGAGTCTGCCTAATTTC +
Preference number: 5 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSLNECV*KSLPNF
Trigger: GAAATTAGGCAGACTCTTCAAAACGCACTCATTCAG...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp ATTCAGGTCACACTACAGACTAATTGTATCAGATTTTCTGGAGGTGGGGTCCAGACTGAGAAGCTCTTTTaGTCCCATGGCTACTTAATG +
Preference number: 5 (lower is better)
Translates to: IQVTLQTNCIRFSGGGVQTEKLF*SHGYLM
Trigger: CATTAAGTAGCCATGGGACAAAAAGAGCTTCTCAGT...CTGGACCCCACCTCCAGAAAATCTGATACAATTAGTCTGTAGTGTGACCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CAA 90 bp CAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTCTCTGTTATTTTCTGTaGAGCCTTTCTGAATACTCG +
Preference number: 5 (lower is better)
Translates to: QHCLQECCPGGLCKVSQSLCYFL*SLSEYS
Trigger: CGAGTATTCAGAAAGGCTCAACAGAAAATAACAGAG...ACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTTGCTTGACCTCCAGTTaGCTGCATGTAATCCATAAA +
Preference number: 5 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSCLTSS*LHVIHK
Trigger: TTTATGGATTACATGCAGCAAACTGGAGGTCAAGCA...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp CAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAAGTTTTGGTTTGGTTGGTTaGATGTTTTCCATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: QHCLQECCPGGLCKVSQSFGLVG*MFSISL
Trigger: CAGAGAGATGGAAAACATCAAACCAACCAAACCAAA...ACTTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAACCCTAAGTGGAATATaGTCATCCACATTATCGTCA +
Preference number: 5 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSATLSGI*SSTLSS
Trigger: TGACGATAATGTGGATGACAATATTCCACTTAGGGT...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR CAA 90 bp TCACACAAATCCCTTAGGAATCCTTCTTCATCTTTGGGGGAAGTGCACACTAGAGACCGTGAATGCAGTTaGTTGAAAAGTTCACGGAAT +
Preference number: 5 (lower is better)
Translates to: SHKSLRNPSSSLGEVHTRDRECS*LKSSRN
Trigger: ATTCCGTGAACTTTTCAACAAACTGCATTCACGGTC...TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATTCCTAAGGGATTTGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CAA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTGACCGTGAATGCAGTTaGTTGAAAAGTTCACGGAAT +
Preference number: 5 (lower is better)
Translates to: GADTTVFELSPRRSVHTIDRECS*LKSSRN
Trigger: ATTCCGTGAACTTTTCAACAAACTGCATTCACGGTC...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp ACTCTTGTTCTCATTCGAATACTTTTATCTCTGCATGGAACAGCCTCTGCTAAACAACGCCATTCTTGCTaGAGATGGGGGCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: TLVLIRILLSLHGTASAKQRHSC*RWGQFS
Trigger: AGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTG...TTTAGCAGAGGCTGTTCCATGCAGAGATAAAAGTATTCGAATGAGAACAAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS CCA 90 bp TCTGATTTTTCCACCCAAAAGGACACATATCTCTGTCTCCAGGATTaGTCTGTGGTGTCTTATTTAGTCCATTTGGTGAGGCCAATGTTT +
Preference number: 5 (lower is better)
Translates to: SDFSTQKDTYLCLQD*SVVSYLVHLVRPMF
Trigger: AAACATTGGCCTCACCAAATGGACTAAATAAGACACCACAGACCAATCCTGGAGACAGAGATATGTGTCCTTTTGGGTGGAAAAATCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS-3UTR CAA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAACTGAATGAGTGCGTTTaGAAGAGTCTGCCTAATTTC +
Preference number: 5 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKLNECV*KSLPNF
Trigger: GAAATTAGGCAGACTCTTCAAAACGCACTCATTCAG...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp ATTCAGGTCACACTACAGACTAATTGTATCAGATTTTCTGGAGGTGGGGTCCAGCATCCTTCAGAGTCCTaGAAGAACTACTTTGTTAAC +
Preference number: 5 (lower is better)
Translates to: IQVTLQTNCIRFSGGGVQHPSES*KNYFVN
Trigger: GTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGATG...CTGGACCCCACCTCCAGAAAATCTGATACAATTAGTCTGTAGTGTGACCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CAA 90 bp TCACACAAATCCCTTAGGAATCCTTCTTCATCTTTGGGGGAAGTGCACACTAGACTCTGTTATTTTCTGTaGAGCCTTTCTGAATACTCG +
Preference number: 5 (lower is better)
Translates to: SHKSLRNPSSSLGEVHTRLCYFL*SLSEYS
Trigger: CGAGTATTCAGAAAGGCTCAACAGAAAATAACAGAG...TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATTCCTAAGGGATTTGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTCTCTGTTATTTTCTGTaGAGCCTTTCTGAATACTCG +
Preference number: 5 (lower is better)
Translates to: GADTTVFELSPRRSVHTILCYFL*SLSEYS
Trigger: CGAGTATTCAGAAAGGCTCAACAGAAAATAACAGAG...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp CCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAAGCAATCGCTGTATTCTaGAGTCACATACCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: PGQNEHQLHRVECHLFCKAIAVF*SHIPSL
Trigger: TAAAGAAGGTATGTGACTCAAGAATACAGCGATTGC...TTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR CAA 90 bp GTCCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAAAGTTTCCCAAAGTTaGCTGCAAGTTTCACAGTAT +
Preference number: 5 (lower is better)
Translates to: VLDKMNTSFIEWSVTFSAKVSQS*LQVSQY
Trigger: ATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTT...TGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR CAA 90 bp CCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAATTTGGTTTGGTTGGTTaGATGTTTTCCATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: PGQNEHQLHRVECHLFCKFGLVG*MFSISL
Trigger: CAGAGAGATGGAAAACATCAAACCAACCAAACCAAA...TTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR CAA 90 bp GATCTAAGTGAAAACAAGACAGTGATATCTTGTTCCAATCTTAAAGCTCCCAAATCCTCACTGTTTAGGTaGCGCCGGTGTACAGTGATG +
Preference number: 5 (lower is better)
Translates to: DLSENKTVISCSNLKAPKSSLFR*RRCTVM
Trigger: CATCACTGTACACCGGCGCAACCTAAACAGTGAGGA...TTTGGGAGCTTTAAGATTGGAACAAGATATCACTGTCTTGTTTTCACTTAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp TCACACAAATCCCTTAGGAATCCTTCTTCATCTTTGGGGGAAGTGCACACTAGAACCCTAAGTGGAATATaGTCATCCACATTATCGTCA +
Preference number: 5 (lower is better)
Translates to: SHKSLRNPSSSLGEVHTRTLSGI*SSTLSS
Trigger: TGACGATAATGTGGATGACAATATTCCACTTAGGGT...TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATTCCTAAGGGATTTGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CAA 90 bp TGCAACATTGTCTACAAGAATGCTGTCCAGGGGGACTGTGCAAAGTTTCCCAAATTTATCTCTGAACCATaGTTTTGTGCTTTCCTTAGC +
Preference number: 5 (lower is better)
Translates to: CNIVYKNAVQGDCAKFPKFISEP*FCAFLS
Trigger: GCTAAGGAAAGCACAAAACAATGGTTCAGAGATAAA...TTTGGGAAACTTTGCACAGTCCCCCTGGACAGCATTCTTGTAGACAATGTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CAA 90 bp GGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGTATTTATTTCGGAAAACTGGATAACTaGCTGGAGAGGTTCATCAAT +
Preference number: 5 (lower is better)
Translates to: GDCAKFPKVCCKFHSIYFGKLDN*LERFIN
Trigger: ATTGATGAACCTCTCCAGCAAGTTATCCAGTTTTCC...GAAATAAATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp CCAACTGTGAGCTGGAGTAGGCAAACAATTGTGTACATCTCTTCCTATTTCCATGGAGTAGGCAAACAATaGTGTACATCTCTTCCTATT +
Preference number: 5 (lower is better)
Translates to: PTVSWSRQTIVYISSYFHGVGKQ*CTSLPI
Trigger: AATAGGAAGAGATGTACACAATTGTTTGCCTACTCC...ATGGAAATAGGAAGAGATGTACACAATTGTTTGCCTACTCCAGCTCACAGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CAA 90 bp AAAGCGGGGGATGCCTTCATCATTTCAGGAGCTAACAGTAACTGCAAATATGCATGCTGTACCTTTCACTaGATCATCTTTCTCTGTTAT +
Preference number: 5 (lower is better)
Translates to: KAGDAFIISGANSNCKYACCTFH*IIFLCY
Trigger: ATAACAGAGAAAGATGATCAAGTGAAAGGTACAGCA...TGCATATTTGCAGTTACTGTTAGCTCCTGAAATGATGAAGGCATCCCCCGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CAA 90 bp GGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGTATTTATTTAAGTATCGCATGATCTaGTTCTGGAAATCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: GGLCKVSQSLLQVSQYLFKYRMI*FWKSPG
Trigger: TCCTGGAGATTTCCAGAACAAGATCATGCGATACTT...AAATAAATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp GGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGTATTTATTTCAAGTATCGCATGATCTaGTTCTGGAAATCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: GDCAKFPKVCCKFHSIYFKYRMI*FWKSPG
Trigger: TCCTGGAGATTTCCAGAACAAGATCATGCGATACTT...GAAATAAATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp GATCTAAGATACTGTAATTCTTCTGCTGCCTTATCTCTGACTGCTTCTAGCTCTTGCTTGACCTCCAGTTaGCTGCATGTAATCCATAAA +
Preference number: 5 (lower is better)
Translates to: DLRYCNSSAALSLTASSSCLTSS*LHVIHK
Trigger: TTTATGGATTACATGCAGCAAACTGGAGGTCAAGCA...AGAGCTAGAAGCAGTCAGAGATAAGGCAGCAGAAGAATTACAGTATCTTAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAATTTGGTTTGGTTGGTTaGATGTTTTCCATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKFGLVG*MFSISL
Trigger: CAGAGAGATGGAAAACATCAAACCAACCAAACCAAA...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTGACATTTTGCCCATGTaGTCTGACATTTTAGTCATT +
Preference number: 5 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSDILPM*SDILVI
Trigger: AATGACTAAAATGTCAGACAACATGGGCAAAATGTC...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp GGTGCAGACACAACAGTATTTGAGTTAAGCCCCAGAAGATCTGTCCATACCATTCGTGAATGCAGTTTGTaGAAAAGTTCACGGAATTTA +
Preference number: 5 (lower is better)
Translates to: GADTTVFELSPRRSVHTIRECSL*KSSRNL
Trigger: TAAATTCCGTGAACTTTTCAACAAACTGCATTCACG...AATGGTATGGACAGATCTTCTGGGGCTTAACTCAAATACTGTTGTGTCTGCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp CCTGGACAAAATGAACACCAGCTTCATAGAGTGGAGTGTCACCTTTTCTGCAAACGTGAATGCAGTTTGTaGAAAAGTTCACGGAATTTA +
Preference number: 5 (lower is better)
Translates to: PGQNEHQLHRVECHLFCKRECSL*KSSRNL
Trigger: TAAATTCCGTGAACTTTTCAACAAACTGCATTCACG...TTTGCAGAAAAGGTGACACTCCACTCTATGAAGCTGGTGTTCATTTTGTCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000611725.4
CDS-3UTR CAA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAACACAGAAATCTCTCTaGGTAGTGGTGGATTATAGA +
Preference number: 5 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKTQKSL*VVVDYR
Trigger: TCTATAATCCACCACTACCAAGAGAGATTTCTGTGT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCAAACCAACGCCATTCTaGCTTGAGATGGGGGCAGTT +
Preference number: 5 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRIKPTPF*LEMGAV
Trigger: AACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTT...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCAAACCAACGCCATTCTaGCTTGAGATGGGGGCAGTT +
Preference number: 5 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCKPTPF*LEMGAV
Trigger: AACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTT...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp TTGAAATGGAAGAAACCAACGCCATTCTTGCTTGAGATGGGGGCAGTTTTCTCTAGAATGCTGATTAGTTaGAAATGGAAGAAACCAACG +
Preference number: 5 (lower is better)
Translates to: LKWKKPTPFLLEMGAVFSRMLIS*KWKKPT
Trigger: CGTTGGTTTCTTCCATTTCAAACTAATCAGCATTCT...AGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTTTCTTCCATTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAACCTCCAAGTCGTACATaGCACAGTCTCCAACTGTTA +
Preference number: 5 (lower is better)
Translates to: PERDVSRIIHLANPQYIKPPSRT*HSLQLL
Trigger: TAACAGTTGGAGACTGTGCAATGTACGACTTGGAGG...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp CTCTTGGAGATGCCTTTTCTGATAAATACTGTTCATAAATTCCAACAGCAGCTGCTGAATGAGTGCGTTTaGAAGAGTCTGCCTAATTTC +
Preference number: 5 (lower is better)
Translates to: LLEMPFLINTVHKFQQQLLNECV*KSLPNF
Trigger: GAAATTAGGCAGACTCTTCAAAACGCACTCATTCAG...CAGCTGCTGTTGGAATTTATGAACAGTATTTATCAGAAAAGGCATCTCCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp ATAACTCCCCAAATGGTATTCAAAATGTGGAGTGTGATGGAGTATGTTAGTGTGCTGACACAGATGCCTTaGATTCTAACAAAAGACTCC +
Preference number: 5 (lower is better)
Translates to: ITPQMVFKMWSVMEYVSVLTQMP*ILTKDS
Trigger: GGAGTCTTTTGTTAGAATCAAAGGCATCTGTGTCAG...CACACTAACATACTCCATCACACTCCACATTTTGAATACCATTTGGGGAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CAA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAAATCCTTCTTCATCTTaGGGGGAAGTGCACACTAGA +
Preference number: 5 (lower is better)
Translates to: PERDVSRIIHLANPQYIKNPSSS*GEVHTR
Trigger: TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATT...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAAAAGTTTCCCAAAGTTaGCTGCAAGTTTCACAGTAT +
Preference number: 5 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKKVSQS*LQVSQY
Trigger: ATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp TCAATTATATTGGCACCCGTCAATCTTCTATCAATCTTAATAGTCCTGGCTTCCTGCTTGACCTCCAGTTaGCTGCATGTAATCCATAAA +
Preference number: 5 (lower is better)
Translates to: SIILAPVNLLSILIVLASCLTSS*LHVIHK
Trigger: TTTATGGATTACATGCAGCAAACTGGAGGTCAAGCA...GGAAGCCAGGACTATTAAGATTGATAGAAGATTGACGGGTGCCAATATAATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444712.5
CDS-3UTR CAA 90 bp CTTCAACTTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATCTGCAAAGAAGGCGCTaGAGTAGTTTGAAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LQLQRRYLQDLLLYLSLDLQRRR*SSLKFL
Trigger: CAGAAACTTCAAACTACTCAAGCGCCTTCTTTGCAG...ATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAAGTTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CAA 90 bp TGCCATGATCATTACAAACGCCTGTGTCTGAAATGTAGGCATGAAGTTGTACTGAGAATGCTGATTAGTTaGAAATGGAAGAAACCAACG +
Preference number: 5 (lower is better)
Translates to: CHDHYKRLCLKCRHEVVLRMLIS*KWKKPT
Trigger: CGTTGGTTTCTTCCATTTCAAACTAATCAGCATTCT...CAGTACAACTTCATGCCTACATTTCAGACACAGGCGTTTGTAATGATCATGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CAA 90 bp GAAATCCTGCATAGAAGGGATGTGAATACTTCTAAGATGGATAAAATGGACAGTATACACTCTGGCACTTaGTCATTGCTGGAGAATGCT +
Preference number: 5 (lower is better)
Translates to: EILHRRDVNTSKMDKMDSIHSGT*SLLENA
Trigger: AGCATTCTCCAGCAATGACAAAGTGCCAGAGTGTAT...ACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp GCCAAACAAACTCCTCCAAGTCGTACATTGCACAGTCTCCAACTGTTAAACAAAATGATTGCAGTTATCTaGCAGGGCTCTATTTTGAAA +
Preference number: 5 (lower is better)
Translates to: AKQTPPSRTLHSLQLLNKMIAVI*QGSILK
Trigger: TTTCAAAATAGAGCCCTGCAAGATAACTGCAATCAT...TTTGTTTAACAGTTGGAGACTGTGCAATGTACGACTTGGAGGAGTTTGTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGAAGGAGACTTTCTACTaGGGCAGGATTTTGATAGGT +
Preference number: 5 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQKETFY*GRILIG
Trigger: ACCTATCAAAATCCTGCCCAAGTAGAAAGTCTCCTT...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR CAA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTGGTACTTCTCTGAGTTaGTTTTTCCAAACAGGAGAG +
Preference number: 5 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFGTSLS*FFQTGE
Trigger: CTCTCCTGTTTGGAAAAACAAACTCAGAGAAGTACC...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CAA 90 bp ATGGCAATAAAGACATTTGTGAACAAATCTGCATGCAGAGTCCTTGAAGACTTTGGAAAACTGGATAACTaGCTGGAGAGGTTCATCAAT +
Preference number: 5 (lower is better)
Translates to: MAIKTFVNKSACRVLEDFGKLDN*LERFIN
Trigger: ATTGATGAACCTCTCCAGCAAGTTATCCAGTTTTCC...AAAGTCTTCAAGGACTCTGCATGCAGATTTGTTCACAAATGTCTTTATTGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CAA 90 bp TTCCATCCTTCAGAGTCCTTGAAGAACTACTTTGTTAACGGTGTCAAAAACTCAAGTGAGACCAAGGTTTaGTTAAACAAAACAGGGTTC +
Preference number: 5 (lower is better)
Translates to: FHPSESLKNYFVNGVKNSSETKV*LNKTGF
Trigger: GAACCCTGTTTTGTTTAACAAAACCTTGGTCTCACT...TGAGTTTTTGACACCGTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGATGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CAA 90 bp TTCCATCCTTCAGAGTCCTTGAAGAACTACTTTGTTAACGGTGTCAAAAACTCACTGCATGCAGAGTCCTaGAAGACTTTCAAATTTCAT +
Preference number: 5 (lower is better)
Translates to: FHPSESLKNYFVNGVKNSLHAES*KTFKFH
Trigger: ATGAAATTTGAAAGTCTTCAAGGACTCTGCATGCAG...TGAGTTTTTGACACCGTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGATGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CAA 90 bp TTCCAACAGCAGCTGCTCTTAAAAGACCTTTGGTTTGGTTGGTTTGATGTTTTCTGCTGTACCTTTCACTaGATCATCTTTCTCTGTTAT +
Preference number: 5 (lower is better)
Translates to: FQQQLLLKDLWFGWFDVFCCTFH*IIFLCY
Trigger: ATAACAGAGAAAGATGATCAAGTGAAAGGTACAGCA...GAAAACATCAAACCAACCAAACCAAAGGTCTTTTAAGAGCAGCTGCTGTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp TTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATCATCTTTAATCCTTCTTCATCTTaGGGGGAAGTGCACACTAGA +
Preference number: 5 (lower is better)
Translates to: FKEGIYKIFCCTFHLIIFNPSSS*GEVHTR
Trigger: TCTAGTGTGCACTTCCCCCAAAGATGAAGAAGGATT...AAAGATGATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp ACTCTTGTTCTCATTCGAATACTTTTATCTCTGCATGGAACAGCCTCTGCTAAAGCAATCGCTGTATTCTaGAGTCACATACCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: TLVLIRILLSLHGTASAKAIAVF*SHIPSL
Trigger: TAAAGAAGGTATGTGACTCAAGAATACAGCGATTGC...TTTAGCAGAGGCTGTTCCATGCAGAGATAAAAGTATTCGAATGAGAACAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CAA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGACAGTATTTATTTCTTaGCCTGACTGCAATCGCTGT +
Preference number: 5 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQTVFIS*PDCNRC
Trigger: ACAGCGATTGCAGTCAGGCAAAGAAATAAATACTGT...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR CAA 90 bp GGGGGACTGTGCAAAGTTTCCCAAAGTTTGCTGCAAGTTTCACAGTATTTATTTAAAGTTTCCCAAAGTTaGCTGCAAGTTTCACAGTAT +
Preference number: 5 (lower is better)
Translates to: GGLCKVSQSLLQVSQYLFKVSQS*LQVSQY
Trigger: ATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTT...AAATAAATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTTGCACAGTCCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp GACTGCAATCGCTGTATTCTTGAGTCACATACCTTCTTTACGAATAGTAAGCTAAATTGTAGTGCAACATaGTCTACAAGAATGCTGTCC +
Preference number: 5 (lower is better)
Translates to: DCNRCILESHTFFTNSKLNCSAT*STRMLS
Trigger: GGACAGCATTCTTGTAGACAATGTTGCACTACAATT...TAGCTTACTATTCGTAAAGAAGGTATGTGACTCAAGAATACAGCGATTGCAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp GACTGCAATCGCTGTATTCTTGAGTCACATACCTTCTTTACGAATAGTAAGCTATTTGGTTTGGTTGGTTaGATGTTTTCCATCTCTCTG +
Preference number: 5 (lower is better)
Translates to: DCNRCILESHTFFTNSKLFGLVG*MFSISL
Trigger: CAGAGAGATGGAAAACATCAAACCAACCAAACCAAA...TAGCTTACTATTCGTAAAGAAGGTATGTGACTCAAGAATACAGCGATTGCAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAATTTAATACCAGGATCTaGGCTCAGTGGTCTGATAAG +
Preference number: 5 (lower is better)
Translates to: PERDVSRIIHLANPQYIKFNTRI*AQWSDK
Trigger: CTTATCAGACCACTGAGCCAAGATCCTGGTATTAAA...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp GATCTAAGTGAAAACAAGACAGTGATATCTTGTTCCAATCTTAAAGCTCCCAAAGGTACTTCTCTGAGTTaGTTTTTCCAAACAGGAGAG +
Preference number: 5 (lower is better)
Translates to: DLSENKTVISCSNLKAPKGTSLS*FFQTGE
Trigger: CTCTCCTGTTTGGAAAAACAAACTCAGAGAAGTACC...TTTGGGAGCTTTAAGATTGGAACAAGATATCACTGTCTTGTTTTCACTTAGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCGGAAAACTGGATAACTaGCTGGAGAGGTTCATCAAT +
Preference number: 5 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRIGKLDN*LERFIN
Trigger: ATTGATGAACCTCTCCAGCAAGTTATCCAGTTTTCC...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCGGAAAACTGGATAACTaGCTGGAGAGGTTCATCAAT +
Preference number: 5 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCGKLDN*LERFIN
Trigger: ATTGATGAACCTCTCCAGCAAGTTATCCAGTTTTCC...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp ATAACTCCCCAAATGGTATTCAAAATGTGGAGTGTGATGGAGTATGTTAGTGTGATGTTAGTGTGTGTTTaGGGAGGAAACATGATTGAA +
Preference number: 5 (lower is better)
Translates to: ITPQMVFKMWSVMEYVSVMLVCV*GGNMIE
Trigger: TTCAATCATGTTTCCTCCCAAAACACACACTAACAT...CACACTAACATACTCCATCACACTCCACATTTTGAATACCATTTGGGGAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CAA 90 bp ATAACTCCCCAAATGGTATTCAAAATGTGGAGTGTGATGGAGTATGTTAGTGTGAATCAGCTTAAAATTTaGTTGACGAGAACCACACAC +
Preference number: 5 (lower is better)
Translates to: ITPQMVFKMWSVMEYVSVNQLKI*LTRTTH
Trigger: GTGTGTGGTTCTCGTCAACAAAATTTTAAGCTGATT...CACACTAACATACTCCATCACACTCCACATTTTGAATACCATTTGGGGAGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CAA 90 bp TTCCATCCTTCAGAGTCCTTGAAGAACTACTTTGTTAACGGTGTCAAAAACTCAAATAAGACTTTTTCTTaGGTTAAGGCTCTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: FHPSESLKNYFVNGVKNSNKTFS*VKALLS
Trigger: ACTCAGCAGAGCCTTAACCAAAGAAAAAGTCTTATT...TGAGTTTTTGACACCGTTAACAAAGTAGTTCTTCAAGGACTCTGAAGGATGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS-3UTR CAA 90 bp ATGCATCTATTTACGCACTTAATGCAAAAGCTACTGGGAGACAATATAGCACAGTGCTGTACCTTTCACTaGATCATCTTTCTCTGTTAT +
Preference number: 5 (lower is better)
Translates to: MHLFTHLMQKLLGDNIAQCCTFH*IIFLCY
Trigger: ATAACAGAGAAAGATGATCAAGTGAAAGGTACAGCA...CTGTGCTATATTGTCTCCCAGTAGCTTTTGCATTAAGTGCGTAAATAGATGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611725.4
CDS-3UTR CAA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCAAGTATCGCATGATCTaGTTCTGGAAATCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCKYRMI*FWKSPG
Trigger: TCCTGGAGATTTCCAGAACAAGATCATGCGATACTT...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp CTTCAACTTCAAAGAAGGTATCTACAAGATCTTCTGCTGTACCTTTCACTTGATACAGTATTTATTTCTTaGCCTGACTGCAATCGCTGT +
Preference number: 5 (lower is better)
Translates to: LQLQRRYLQDLLLYLSLDTVFIS*PDCNRC
Trigger: ACAGCGATTGCAGTCAGGCAAAGAAATAAATACTGT...ATCAAGTGAAAGGTACAGCAGAAGATCTTGTAGATACCTTCTTTGAAGTTGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAACAGTATTTATTTCTTaGCCTGACTGCAATCGCTGT +
Preference number: 5 (lower is better)
Translates to: PERDVSRIIHLANPQYIKTVFIS*PDCNRC
Trigger: ACAGCGATTGCAGTCAGGCAAAGAAATAAATACTGT...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAAATTGTAGTGCAACATaGTCTACAAGAATGCTGTCC +
Preference number: 5 (lower is better)
Translates to: PERDVSRIIHLANPQYIKNCSAT*STRMLS
Trigger: GGACAGCATTCTTGTAGACAATGTTGCACTACAATT...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp GATCTAAGTGAAAACAAGACAGTGATATCTTGTTCCAATCTTAAAGCTCCCAAATGCTTGACCTCCAGTTaGCTGCATGTAATCCATAAA +
Preference number: 5 (lower is better)
Translates to: DLSENKTVISCSNLKAPKCLTSS*LHVIHK
Trigger: TTTATGGATTACATGCAGCAAACTGGAGGTCAAGCA...TTTGGGAGCTTTAAGATTGGAACAAGATATCACTGTCTTGTTTTCACTTAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp GAAATCCTGCATAGAAGGGATGTGAATACTTCTAAGATGGATAAAATGGACAGTACACAGAAATCTCTCTaGGTAGTGGTGGATTATAGA +
Preference number: 5 (lower is better)
Translates to: EILHRRDVNTSKMDKMDSTQKSL*VVVDYR
Trigger: TCTATAATCCACCACTACCAAGAGAGATTTCTGTGT...ACTGTCCATTTTATCCATCTTAGAAGTATTCACATCCCTTCTATGCAGGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCAACCAAGTGCATCCATaGGTCAATGGCACAATTGAT +
Preference number: 5 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCNQVHP*VNGTID
Trigger: ATCAATTGTGCCATTGACCAATGGATGCACTTGGTT...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS TCA 90 bp CTGACTTTCTTTGATTATACCAATTATATGTTCTGTGTTCCACAGTaGGTCTGCATCTGTAATTCTGGCTGGCTACTTTGTAAATTCTTG +
Preference number: 5 (lower is better)
Translates to: LTFFDYTNYMFCVPQ*VCICNSGWLLCKFL
Trigger: CAAGAATTTACAAAGTAGCCAGCCAGAATTACAGATGCAGACTCACTGTGGAACACAGAACATATAATTGGTATAATCAAAGAAAGTCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS-3UTR CAA 90 bp GATCTAAGTGAAAACAAGACAGTGATATCTTGTTCCAATCTTAAAGCTCCCAAACTCTGTTATTTTCTGTaGAGCCTTTCTGAATACTCG +
Preference number: 5 (lower is better)
Translates to: DLSENKTVISCSNLKAPKLCYFL*SLSEYS
Trigger: CGAGTATTCAGAAAGGCTCAACAGAAAATAACAGAG...TTTGGGAGCTTTAAGATTGGAACAAGATATCACTGTCTTGTTTTCACTTAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCGCAATCGCTGTATTCTaGAGTCACATACCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCAIAVF*SHIPSL
Trigger: TAAAGAAGGTATGTGACTCAAGAATACAGCGATTGC...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp GAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAAAAGATGCAATCGCTGTATTCTaGAGTCACATACCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: ERSSKDKFMLPVGDPLKDAIAVF*SHIPSL
Trigger: TAAAGAAGGTATGTGACTCAAGAATACAGCGATTGC...ATCTTTTAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCAATTGTAGTGCAACATaGTCTACAAGAATGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRINCSAT*STRMLS
Trigger: GGACAGCATTCTTGTAGACAATGTTGCACTACAATT...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp TTCATATACCTTTCTTTGAATGTCATCAAAGATTTCAGGGGTTGGATCTTCATGAATTGTAGTGCAACATaGTCTACAAGAATGCTGTCC +
Preference number: 5 (lower is better)
Translates to: FIYLSLNVIKDFRGWIFMNCSAT*STRMLS
Trigger: GGACAGCATTCTTGTAGACAATGTTGCACTACAATT...CATGAAGATCCAACCCCTGAAATCTTTGATGACATTCAAAGAAAGGTATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409076.6
ENST00000444712.5
CDS-3UTR CAA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCACCCTAAGTGGAATATaGTCATCCACATTATCGTCA +
Preference number: 5 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRITLSGI*SSTLSS
Trigger: TGACGATAATGTGGATGACAATATTCCACTTAGGGT...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp CCTGAAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAACGTGAATGCAGTTTGTaGAAAAGTTCACGGAATTTA +
Preference number: 5 (lower is better)
Translates to: PERDVSRIIHLANPQYIKRECSL*KSSRNL
Trigger: TAAATTCCGTGAACTTTTCAACAAACTGCATTCACG...TTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409076.6
ENST00000428135.7
ENST00000611725.4
CDS-3UTR CAA 90 bp GAAAGGTCATCTAAAGACAAATTTATGCTTCCTGTAGGAGACCCATTAAAAGATACACAGAAATCTCTCTaGGTAGTGGTGGATTATAGA +
Preference number: 5 (lower is better)
Translates to: ERSSKDKFMLPVGDPLKDTQKSL*VVVDYR
Trigger: TCTATAATCCACCACTACCAAGAGAGATTTCTGTGT...ATCTTTTAATGGGTCTCCTACAGGAAGCATAAATTTGTCTTTAGATGACCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS-3UTR CAA 90 bp AAAGAGATGTTTCAAGGATCATTCACCTGGCTAATCCACAATATATCAAAATGCTGGTCAATGGCACAATaGATTTCAGCAACTATTTGG +
Preference number: 5 (lower is better)
Translates to: KEMFQGSFTWLIHNISKCWSMAQ*ISATIW
Trigger: CCAAATAGTTGCTGAAATCAATTGTGCCATTGACCA...GCATTTTGATATATTGTGGATTAGCCAGGTGAATGATCCTTGAAACATCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp GATCTAAGTGAAAACAAGACAGTGATATCTTGTTCCAATCTTAAAGCTCCCAAATGCTGTACCTTTCACTaGATCATCTTTCTCTGTTAT +
Preference number: 5 (lower is better)
Translates to: DLSENKTVISCSNLKAPKCCTFH*IIFLCY
Trigger: ATAACAGAGAAAGATGATCAAGTGAAAGGTACAGCA...TTTGGGAGCTTTAAGATTGGAACAAGATATCACTGTCTTGTTTTCACTTAGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp GATCTAAGTGAAAACAAGACAGTGATATCTTGTTCCAATCTTAAAGCTCCCAAAAAAGTTTCCCAAAGTTaGCTGCAAGTTTCACAGTAT +
Preference number: 5 (lower is better)
Translates to: DLSENKTVISCSNLKAPKKVSQS*LQVSQY
Trigger: ATACTGTGAAACTTGCAGCAAACTTTGGGAAACTTT...TTTGGGAGCTTTAAGATTGGAACAAGATATCACTGTCTTGTTTTCACTTAGATC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS-3UTR CAA 90 bp AGCTTTAAAGGAAGGCTTTATTCTGTTAATAACCCTCACTTTGTAAGTAGGATCAGAATGCTGATTAGTTaGAAATGGAAGAAACCAACG +
Preference number: 5 (lower is better)
Translates to: SFKGRLYSVNNPHFVSRIRMLIS*KWKKPT
Trigger: CGTTGGTTTCTTCCATTTCAAACTAATCAGCATTCT...GATCCTACTTACAAAGTGAGGGTTATTAACAGAATAAAGCCTTCCTTTAAAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428135.7
CDS CCA 72 bp AGTCTTCTCCCGGGCGGCGGTTTTACTCGGCTTCGCTaGCCTCCCCTCGGCCCGGTCGCTCGCGACGGACGC +
Preference number: 6 (lower is better)
Translates to: SLLPGGGFTRLR*PPLGPVARDGR
Trigger: GCGTCCGTCGCGAGCGACCGGGCCGAGGGGAGGCCAGCGAAGCCGAGTAAAACCGCCGCCCGGGAGAAGACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000409604.1
ENST00000428135.7
ENST00000444712.5
ENST00000471744.1
ENST00000474067.5
ENST00000475800.5
CDS GCA 72 bp GCGAAAACTGCTCGGGCCGCCGCCAACGGCGGCAACTaGTCCTTCAGTCTTCTCCCGGGCGGCGGTTTTACT +
Preference number: 6 (lower is better)
Translates to: AKTARAAANGGN*SFSLLPGGGFT
Trigger: AGTAAAACCGCCGCCCGGGAGAAGACTGAAGGAGCAGTTGCCGCCGTTGGCGGCGGCCCGAGCAGTTTTCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000409076.6
ENST00000409604.1
ENST00000428135.7
ENST00000444712.5
ENST00000471744.1
ENST00000474067.5
ENST00000475800.5
ENST00000482558.5
ENST00000611725.4
CDS GCA 72 bp TCGCCTCATGGCAACAGCCGTAGCAGCAGCGAAAACTaGTCGGGCCGCCGCCAACGGCGGCAACTGCTCCTT +
Preference number: 6 (lower is better)
Translates to: SPHGNSRSSSEN*SGRRQRRQLLL
Trigger: AAGGAGCAGTTGCCGCCGTTGGCGGCGGCCCGAGCAGTTTTCGCTGCTGCTACGGCTGTTGCCATGAGGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000409076.6
ENST00000409604.1
ENST00000428135.7
ENST00000444712.5
ENST00000471744.1
ENST00000474067.5
ENST00000475800.5
ENST00000482558.5
ENST00000611725.4
CDS TCA 72 bp CCCTTACATTCTCCCAAACAGAGTCAGTCTCTCTGCTaGGTTGTGTGGAGCTGGGAGAGGGGTGACACAAGC +
Preference number: 6 (lower is better)
Translates to: PLHSPKQSQSLC*VVWSWERGDTS
Trigger: GCTTGTGTCACCCCTCTCCCAGCTCCACACAACTCAGCAGAGAGACTGACTCTGTTTGGGAGAATGTAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498463.5
CDS GCA 72 bp TTTGTTAAACAAAACAGGGTTCCAGGAAGCGGAGGTTaGAGTGAGCCGAGATTGCGCCATTGTACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: FVKQNRVPGSGG*SEPRLRHCTPA
Trigger: GGCTGGAGTACAATGGCGCAATCTCGGCTCACTGCAACCTCCGCTTCCTGGAACCCTGTTTTGTTTAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS GCA 72 bp CTGCCTCCATGCTCTCTTCTCTCAGGCAGAAACTCTTaGTTTCTTCCCTTACATTCTCCCAAACAGAGTCAG +
Preference number: 6 (lower is better)
Translates to: LPPCSLLSGRNS*FLPLHSPKQSQ
Trigger: CTGACTCTGTTTGGGAGAATGTAAGGGAAGAAAGCAAGAGTTTCTGCCTGAGAGAAGAGAGCATGGAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494402.5
ENST00000498463.5
CDS CAA 72 bp GTCTTTACAGTCTGGGCTTGTTTGTCCCAGTCCTTCTaGGGAAGGCTTTCCAGGTATTCAAAGGAACTTGGG +
Preference number: 6 (lower is better)
Translates to: VFTVWACLSQSF*GRLSRYSKELG
Trigger: CCCAAGTTCCTTTGAATACCTGGAAAGCCTTCCCAAGAAGGACTGGGACAAACAAGCCCAGACTGTAAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS CCA 72 bp TCTTTACAGTCTGGGCTTGTTTGTCCCAGTCCTTCTTaGGAAGGCTTTCCAGGTATTCAAAGGAACTTGGGT +
Preference number: 6 (lower is better)
Translates to: SLQSGLVCPSPS*EGFPGIQRNLG
Trigger: ACCCAAGTTCCTTTGAATACCTGGAAAGCCTTCCCAAGAAGGACTGGGACAAACAAGCCCAGACTGTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS CAA 72 bp GAGTTAGGCATTTATTGCAGTCTTTACAGTCTGGGCTaGTTTGTCCCAGTCCTTCTTGGGAAGGCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: ELGIYCSLYSLG*FVPVLLGKAFQ
Trigger: CTGGAAAGCCTTCCCAAGAAGGACTGGGACAAACAAGCCCAGACTGTAAAGACTGCAATAAATGCCTAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS CCA 72 bp TCCACCCAAAAGGACACATATCTCTGTCTCCAGGATTaGTCTGTGGTGTCTTATTTAGTCCATTTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: STQKDTYLCLQD*SVVSYLVHLVR
Trigger: CCTCACCAAATGGACTAAATAAGACACCACAGACCAATCCTGGAGACAGAGATATGTGTCCTTTTGGGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS CAA 90 bp TTTATTGCAGTCTTTACAGTCTGGGCTTGTTTGTCCCAGTCCTTCTaGGGAAGGCTTTCCAGGTATTCAAAGGAACTTGGGTGTTGTGAT +
Preference number: 6 (lower is better)
Translates to: FIAVFTVWACLSQSF*GRLSRYSKELGCCD
Trigger: ATCACAACACCCAAGTTCCTTTGAATACCTGGAAAGCCTTCCCAAGAAGGACTGGGACAAACAAGCCCAGACTGTAAAGACTGCAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS CAA 72 bp TTCCACCCAAAAGGACACATATCTCTGTCTCCAGGATaGGTCTGTGGTGTCTTATTTAGTCCATTTGGTGAG +
Preference number: 6 (lower is better)
Translates to: FHPKGHISLSPG*VCGVLFSPFGE
Trigger: CTCACCAAATGGACTAAATAAGACACCACAGACCAATCCTGGAGACAGAGATATGTGTCCTTTTGGGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS CAA 90 bp GACATTGAAGAGTTAGGCATTTATTGCAGTCTTTACAGTCTGGGCTaGTTTGTCCCAGTCCTTCTTGGGAAGGCTTTCCAGGTATTCAAA +
Preference number: 6 (lower is better)
Translates to: DIEELGIYCSLYSLG*FVPVLLGKAFQVFK
Trigger: TTTGAATACCTGGAAAGCCTTCCCAAGAAGGACTGGGACAAACAAGCCCAGACTGTAAAGACTGCAATAAATGCCTAACTCTTCAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS CAA 90 bp ATTATTGTTCAAATCATAAAACTTGTGCCAGGCTCCCCAATGAGGTaGGGAAACACATCCAATGCCCTTCCTCTAGCCAACTCCAAATCT +
Preference number: 6 (lower is better)
Translates to: IIVQIIKLVPGSPMR*GNTSNALPLANSKS
Trigger: AGATTTGGAGTTGGCTAGAGGAAGGGCATTGGATGTGTTTCCCAACCTCATTGGGGAGCCTGGCACAAGTTTTATGATTTGAACAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS TCA 72 bp TGTACAGTGATGGCATATAATGCATATGTCTTGCCATaGTCATTACAAACGCCTGCCACAGCATATGGGTCA +
Preference number: 6 (lower is better)
Translates to: CTVMAYNAYVLP*SLQTPATAYGS
Trigger: TGACCCATATGCTGTGGCAGGCGTTTGTAATGATCATGGCAAGACATATGCATTATATGCCATCACTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496855.1
ENST00000611725.4
CDS CCA 72 bp AATACTTTGCTGAAGTTCCTAATCCACACTAAAATATaGCATGCCACTCTCTCCTGGCCTGTACAACTTCCA +
Preference number: 6 (lower is better)
Translates to: NTLLKFLIHTKI*HATLSWPVQLP
Trigger: TGGAAGTTGTACAGGCCAGGAGAGAGTGGCATGCCATATTTTAGTGTGGATTAGGAACTTCAGCAAAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS CAA 72 bp CCTTCTTGGGAAGGCTTTCCAGGTATTCAAAGGAACTaGGGTGTTGTGATCTATGTTTCTAGTAACTGTAGC +
Preference number: 6 (lower is better)
Translates to: PSWEGFPGIQRN*GVVIYVSSNCS
Trigger: GCTACAGTTACTAGAAACATAGATCACAACACCCAAGTTCCTTTGAATACCTGGAAAGCCTTCCCAAGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS CAA 90 bp TGTCCCAGTCCTTCTTGGGAAGGCTTTCCAGGTATTCAAAGGAACTaGGGTGTTGTGATCTATGTTTCTAGTAACTGTAGCCATATATAC +
Preference number: 6 (lower is better)
Translates to: CPSPSWEGFPGIQRN*GVVIYVSSNCSHIY
Trigger: GTATATATGGCTACAGTTACTAGAAACATAGATCACAACACCCAAGTTCCTTTGAATACCTGGAAAGCCTTCCCAAGAAGGACTGGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS CAA 72 bp GGGCGAGACTCTAGTAGCAAACTGAATGAGTGCGTTTaGAAGAGTCTGCCTAATTTCAAGAAGAAAAGATTC +
Preference number: 6 (lower is better)
Translates to: GRDSSSKLNECV*KSLPNFKKKRF
Trigger: GAATCTTTTCTTCTTGAAATTAGGCAGACTCTTCAAAACGCACTCATTCAGTTTGCTACTAGAGTCTCGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409604.1
CDS CAA 72 bp TGCATCTGTAATTCTGGCTGGCTACTTTGTAAATTCTaGCTCCTAATCACGAGGGATGAGGAGTACAAATCT +
Preference number: 6 (lower is better)
Translates to: CICNSGWLLCKF*LLITRDEEYKS
Trigger: AGATTTGTACTCCTCATCCCTCGTGATTAGGAGCAAGAATTTACAAAGTAGCCAGCCAGAATTACAGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS TCA 72 bp CTTGATGCTTGTGGATGTTCACTGATGTCTGGACATTaGAGAGTTAGGCATTTATTGCAGTCTTTACAGTCT +
Preference number: 6 (lower is better)
Translates to: LDACGCSLMSGH*RVRHLLQSLQS
Trigger: AGACTGTAAAGACTGCAATAAATGCCTAACTCTTCAATGTCCAGACATCAGTGAACATCCACAAGCATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492626.5
CDS CAA 72 bp TCCCCAGCATCTAGTAGCAAACTGAATGAGTGCGTTTaGAAGAGTCTGCCTAATTTCAAGAAGAAAAGATTC +
Preference number: 6 (lower is better)
Translates to: SPASSSKLNECV*KSLPNFKKKRF
Trigger: GAATCTTTTCTTCTTGAAATTAGGCAGACTCTTCAAAACGCACTCATTCAGTTTGCTACTAGATGCTGGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409076.6
CDS CAA 72 bp GTGTCCTTACCTAGTAGCAAACTGAATGAGTGCGTTTaGAAGAGTCTGCCTAATTTCAAGAAGAAAAGATTC +
Preference number: 6 (lower is better)
Translates to: VSLPSSKLNECV*KSLPNFKKKRF
Trigger: GAATCTTTTCTTCTTGAAATTAGGCAGACTCTTCAAAACGCACTCATTCAGTTTGCTACTAGGTAAGGACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492626.5