RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNX11 (Homo sapiens)

Ensembl gene IDs: ENSG00000002919

Ensembl transcript IDs: ENST00000359238.7, ENST00000393405.6, ENST00000452859.6, ENST00000577310.1, ENST00000578861.5, ENST00000580219.5, ENST00000580875.1, ENST00000581298.5, ENST00000581705.5, ENST00000582104.5, ENST00000582481.1, ENST00000583320.5, ENST00000584335.5

Found 521 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCATCCCCAGAGCCCTCTCTTTCAGGCAGGCAGAAACAAAGCCCTTaGACCCCACTGCACTGCGCAACACAGCAGAGACGCTGGTGGCGG +
Preference number: 1 (lower is better)
Translates to: PSPEPSLSGRQKQSP*TPLHCATQQRRWWR
Trigger: CCGCCACCAGCGTCTCTGCTGTGTTGCGCAGTGCAGTGGGGTGCAAGGGCTTTGTTTCTGCCTGCCTGAAAGAGAGGGCTCTGGGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR GCA 90 bp AGCCCTCTCTTTCAGGCAGGCAGAAACAAAGCCCTTGCACCCCACTaGACTGCGCAACACAGCAGAGACGCTGGTGGCGGAAGCCCTGGA +
Preference number: 1 (lower is better)
Translates to: SPLFQAGRNKALAPH*TAQHSRDAGGGSPG
Trigger: TCCAGGGCTTCCGCCACCAGCGTCTCTGCTGTGTTGCGCAGTGCAGTGGGGTGCAAGGGCTTTGTTTCTGCCTGCCTGAAAGAGAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR GCA 90 bp GGCTGTTACTGTTCCCTCTGGCTGTGGCCAGCCACTTCTCTCTCATaGATGACCATGAGCTGTTGTGCAGGTCTCAGGCTCCACTCAGCC +
Preference number: 1 (lower is better)
Translates to: GCYCSLWLWPATSLS*MTMSCCAGLRLHSA
Trigger: GGCTGAGTGGAGCCTGAGACCTGCACAACAGCTCATGGTCATGCATGAGAGAGAAGTGGCTGGCCACAGCCAGAGGGAACAGTAACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR TCA 90 bp TGCCTGTGGCACTCGGCTCCTACCAGCTCTGGCTCTCAGTGGAGATaGAGAATGGCAGCAGGAGGACAGAATGCCTCATTGTCTGAAGGA +
Preference number: 1 (lower is better)
Translates to: CLWHSAPTSSGSQWR*RMAAGGQNASLSEG
Trigger: TCCTTCAGACAATGAGGCATTCTGTCCTCCTGCTGCCATTCTTCATCTCCACTGAGAGCCAGAGCTGGTAGGAGCCGAGTGCCACAGGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR CCA 90 bp CTCCCACAGCCCTCCTCACAGACTGAAGAGTGGAGGTTCCCTCTTTaGGTCTTCCAAAATCACAGCATAATGGTGAGGAGAGGGGTGGGA +
Preference number: 1 (lower is better)
Translates to: LPQPSSQTEEWRFPL*VFQNHSIMVRRGVG
Trigger: TCCCACCCCTCTCCTCACCATTATGCTGTGATTTTGGAAGACCCAAAGAGGGAACCTCCACTCTTCAGTCTGTGAGGAGGGCTGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581705.5
3UTR TCA 90 bp TGTGCCCAGTCCCACCTGAGTAAGTCTCCTGGCCCGCATCTTCTCTaGCCATCTCAGAGCAGAACCCAGAGCTCACTTTTCCAAAACTGT +
Preference number: 1 (lower is better)
Translates to: CAQSHLSKSPGPHLL*PSQSRTQSSLFQNC
Trigger: ACAGTTTTGGAAAAGTGAGCTCTGGGTTCTGCTCTGAGATGGTCAGAGAAGATGCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581705.5
3UTR GCA 90 bp TCCATGCAAGGAGGTAGGCAAGAGGCCAGCCTCCCACAAACAAAGTaGTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGAT +
Preference number: 1 (lower is better)
Translates to: SMQGGRQEASLPQTK*SRATAKTEASQDGD
Trigger: ATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAGGCTGGCCTCTTGCCTACCTCCTTGCATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR GCA 90 bp CAGGGGAGGCGGGCAGGAAAGAGGGATGAATACCAGCCAGGGCTTTaGATCTGCCTGTTGACAAACTTTATTTCTCTTTCAGCACCTGGC +
Preference number: 1 (lower is better)
Translates to: QGRRAGKRDEYQPGL*ICLLTNFISLSAPG
Trigger: GCCAGGTGCTGAAAGAGAAATAAAGTTTGTCAACAGGCAGATGCAAAGCCCTGGCTGGTATTCATCCCTCTTTCCTGCCCGCCTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR CCA 90 bp TCTATCTCAGGCACCGAGAGCTGGCTTTGCAGGAATAGGTGCAACTaGCTGTCTGACAGGAGAACCACACTCTGCAGGACCTTTTCAAGG +
Preference number: 1 (lower is better)
Translates to: SISGTESWLCRNRCN*LSDRRTTLCRTFSR
Trigger: CCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCCTGCAAAGCCAGCTCTCGGTGCCTGAGATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
3UTR CCA 90 bp AGTCAACAACTGGAGCCCACACTTCTAAATGGTCCTTTTCTTCACTaGGAGGCGGTGAGGGAGAGCTCCTCCTACCCGATCTTGGAAGAA +
Preference number: 1 (lower is better)
Translates to: SQQLEPTLLNGPFLH*EAVRESSSYPILEE
Trigger: TTCTTCCAAGATCGGGTAGGAGGAGCTCTCCCTCACCGCCTCCCAGTGAAGAAAAGGACCATTTAGAAGTGTGGGCTCCAGTTGTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581705.5
3UTR GCA 90 bp CCAGCTCTTTGGAAGACAATCCTTCCTCCAGTGGTGAACTTGAGCTaGACACACAATGCAGGAGGGCTACAGAGCACAGTTCTGAAGCAT +
Preference number: 1 (lower is better)
Translates to: PALWKTILPPVVNLS*THNAGGLQSTVLKH
Trigger: ATGCTTCAGAACTGTGCTCTGTAGCCCTCCTGCATTGTGTGTGCAGCTCAAGTTCACCACTGGAGGAAGGATTGTCTTCCAAAGAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR CCA 90 bp TGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTaGTCCTACATACAAATGACCTGCAGAAACTCAGATCCCAGGAGA +
Preference number: 1 (lower is better)
Translates to: CHIRVPKTGHLRRYS*SYIQMTCRNSDPRR
Trigger: TCTCCTGGGATCTGAGTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
3UTR CCA 90 bp AAGGTTCACGCCCAGAACTGTGAGAAGAGTTGGATCCCAGCTCTTTaGAAGACAATCCTTCCTCCAGTGGTGAACTTGAGCTGCACACAC +
Preference number: 1 (lower is better)
Translates to: KVHAQNCEKSWIPAL*KTILPPVVNLSCTH
Trigger: GTGTGTGCAGCTCAAGTTCACCACTGGAGGAAGGATTGTCTTCCAAAGAGCTGGGATCCAACTCTTCTCACAGTTCTGGGCGTGAACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR TCA 90 bp GGACCTTTTCAAGGAAGTGCTGCAGACCTTGTCGTCGCTTCTCAATaGACTCATCTGAGGTGCCGAAGAAGGTTGACTTCCCAGGAAGTT +
Preference number: 1 (lower is better)
Translates to: GPFQGSAADLVVASQ*THLRCRRRLTSQEV
Trigger: AACTTCCTGGGAAGTCAACCTTCTTCGGCACCTCAGATGAGTTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTCCTTGAAAAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583320.5
3UTR CCA 90 bp AGATCAGAGAGCTTCAGGCACAGCTGGGTTCACAGCTGCACCATTTaGAGCATTGGGCTCATTAATATTCATGAGCCATCCCCACCAATC +
Preference number: 1 (lower is better)
Translates to: RSESFRHSWVHSCTI*SIGLINIHEPSPPI
Trigger: GATTGGTGGGGATGGCTCATGAATATTAATGAGCCCAATGCTCCAAATGGTGCAGCTGTGAACCCAGCTGTGCCTGAAGCTCTCTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR TCA 90 bp CAGGAAAGAGGGATGAATACCAGCCAGGGCTTTGCATCTGCCTGTTaGCAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGAC +
Preference number: 1 (lower is better)
Translates to: QERGMNTSQGFASAC*QTLFLFQHLAPQTD
Trigger: GTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGTCAACAGGCAGATGCAAAGCCCTGGCTGGTATTCATCCCTCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR GCA 90 bp GAAGACAATCCTTCCTCCAGTGGTGAACTTGAGCTGCACACACAATaGAGGAGGGCTACAGAGCACAGTTCTGAAGCATTATTTCCACAC +
Preference number: 1 (lower is better)
Translates to: EDNPSSSGELELHTQ*RRATEHSSEALFPH
Trigger: GTGTGGAAATAATGCTTCAGAACTGTGCTCTGTAGCCCTCCTGCATTGTGTGTGCAGCTCAAGTTCACCACTGGAGGAAGGATTGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR GCA 90 bp GAAGTTTCGAGATCAGAGAGCTTCAGGCACAGCTGGGTTCACAGCTaGACCATTTGGAGCATTGGGCTCATTAATATTCATGAGCCATCC +
Preference number: 1 (lower is better)
Translates to: EVSRSESFRHSWVHS*TIWSIGLINIHEPS
Trigger: GGATGGCTCATGAATATTAATGAGCCCAATGCTCCAAATGGTGCAGCTGTGAACCCAGCTGTGCCTGAAGCTCTCTGATCTCGAAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR CCA 90 bp AGCTCCTGTCTGGAAGTTTCGAGATCAGAGAGCTTCAGGCACAGCTaGGTTCACAGCTGCACCATTTGGAGCATTGGGCTCATTAATATT +
Preference number: 1 (lower is better)
Translates to: SSCLEVSRSESFRHS*VHSCTIWSIGLINI
Trigger: AATATTAATGAGCCCAATGCTCCAAATGGTGCAGCTGTGAACCCAGCTGTGCCTGAAGCTCTCTGATCTCGAAACTTCCAGACAGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR CCA 90 bp AGGATTCCAAAAAGAAAGGAGCCCACTCTAACCCTGCGGAAAAGATaGCCACATGTCTGCTTTATAACCAGAAGAGACAGTAACAGCCCG +
Preference number: 1 (lower is better)
Translates to: RIPKRKEPTLTLRKR*PHVCFITRRDSNSP
Trigger: CGGGCTGTTACTGTCTCTTCTGGTTATAAAGCAGACATGTGGCCATCTTTTCCGCAGGGTTAGAGTGGGCTCCTTTCTTTTTGGAATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR TCA 90 bp TTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCGTGCCCAGTCCCACCTaGGTAAGTCTCCTGGCCCGC +
Preference number: 2 (lower is better)
Translates to: FLFQHLAPQTDCEDGSSIVPSPT*VSLLAR
Trigger: GCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCAC...GATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR TCA 90 bp CCTTTTCTTCACTGGGAGGCGGTGAGGGAGAGCTCCTCCTACCCGATCTTGGAAGGCCCGCATCTTCTCTaGCCATCTCAGAGCAGAACC +
Preference number: 2 (lower is better)
Translates to: PFLHWEAVRESSSYPILEGPHLL*PSQSRT
Trigger: GGTTCTGCTCTGAGATGGTCAGAGAAGATGCGGGCC...TTCCAAGATCGGGTAGGAGGAGCTCTCCCTCACCGCCTCCCAGTGAAGAAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581705.5
3UTR-3UTR TCA 90 bp GTAGGCAAGAGGCCAGCCTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAAGTGCCCAGTCCCACCTaGGTAAGTCTCCTGGCCCGC +
Preference number: 2 (lower is better)
Translates to: VGKRPASHKQSALGLQQKVPSPT*VSLLAR
Trigger: GCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCAC...TTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAGGCTGGCCTCTTGCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR TCA 90 bp CATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAGTGCCCAGTCCCACCTaGGTAAGTCTCCTGGCCCGC +
Preference number: 2 (lower is better)
Translates to: HTGPQNWSPEEILLVLHTVPSPT*VSLLAR
Trigger: GCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCAC...TGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR CCA 90 bp TTGGAAGACAATCCTTCCTCCAGTGGTGAACTTGAGCTGCACACACAATGCAGGCAGCAGAGACGCTGGTaGCGGAAGCCCTGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LEDNPSSSGELELHTQCRQQRRW*RKPWRQ
Trigger: CTGCCTCCAGGGCTTCCGCCACCAGCGTCTCTGCTG...CCTGCATTGTGTGTGCAGCTCAAGTTCACCACTGGAGGAAGGATTGTCTTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR TCA 90 bp CCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATGGCCCGCATCTTCTCTaGCCATCTCAGAGCAGAACC +
Preference number: 2 (lower is better)
Translates to: PHTGPQNWSPEEILLVLHGPHLL*PSQSRT
Trigger: GGTTCTGCTCTGAGATGGTCAGAGAAGATGCGGGCC...ATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR TCA 90 bp GCTCCACTCAGCCAGGCTAAGGTCTCGGGACATAAATCCCCAGCAGCAGGAGTCCCACTCCCAGTGGGATaGTGTTCAATATGGCAGCTT +
Preference number: 2 (lower is better)
Translates to: APLSQAKVSGHKSPAAGVPLPVG*CSIWQL
Trigger: AAGCTGCCATATTGAACATCATCCCACTGGGAGTGG...GACTCCTGCTGCTGGGGATTTATGTCCCGAGACCTTAGCCTGGCTGAGTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR TCA 90 bp GAAAGTAAATATTCATCCCCCTGTCCATGCAAGGAGGTAGGCAAGAGGCCAGCCGGCCCGCATCTTCTCTaGCCATCTCAGAGCAGAACC +
Preference number: 2 (lower is better)
Translates to: ESKYSSPCPCKEVGKRPAGPHLL*PSQSRT
Trigger: GGTTCTGCTCTGAGATGGTCAGAGAAGATGCGGGCC...GGCTGGCCTCTTGCCTACCTCCTTGCATGGACAGGGGGATGAATATTTACTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR TCA 90 bp CACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACTCAGATGTGCCCAGTCCCACCTaGGTAAGTCTCCTGGCCCGC +
Preference number: 2 (lower is better)
Translates to: HLRRYSWSYIQMTCRNSDVPSPT*VSLLAR
Trigger: GCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCAC...ATCTGAGTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR GCA 90 bp TTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCATCATCCCCCTGTCCATaGAAGGAGGTAGGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: FSFSTWHLRQTARMEAASSSPCP*KEVGKR
Trigger: CCTCTTGCCTACCTCCTTGCATGGACAGGGGGATGA...TGATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR GCA 90 bp TTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCAGGTAAACAGAAACAAAGCCCTTaGACCCCACTGCACTGCGCA +
Preference number: 2 (lower is better)
Translates to: FSTWHLRQTARMEAASGKQKQSP*TPLHCA
Trigger: TGCGCAGTGCAGTGGGGTGCAAGGGCTTTGTTTCTG...TTTACCTGATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR GCA 90 bp GCACAGCATGATCTCCTCCCACAGCCCTCCTCACAGACTGAAGAGTGGAGGTTCCTTTGCAGGAATAGGTaGAACTGGCTGTCTGACAGG +
Preference number: 2 (lower is better)
Translates to: AQHDLLPQPSSQTEEWRFLCRNR*NWLSDR
Trigger: CCTGTCAGACAGCCAGTTGCACCTATTCCTGCAAAG...GAACCTCCACTCTTCAGTCTGTGAGGAGGGCTGTGGGAGGAGATCATGCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581705.5
3UTR-3UTR CCA 90 bp CAGGCTTCTATCTCAGGCACCGAGAGCTGGCTTTGCAGGAATAGGTGCAACTGGCATCAGACACAGTCATaGTACTTCGGCCCTGGACAC +
Preference number: 2 (lower is better)
Translates to: QASISGTESWLCRNRCNWHQTQS*YFGPGH
Trigger: GTGTCCAGGGCCGAAGTACCATGACTGTGTCTGATG...CCAGTTGCACCTATTCCTGCAAAGCCAGCTCTCGGTGCCTGAGATAGAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
3UTR-3UTR TCA 90 bp CACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGGGCCCGCATCTTCTCTaGCCATCTCAGAGCAGAACC +
Preference number: 2 (lower is better)
Translates to: HKQSALGLQQKLKPAKMGGPHLL*PSQSRT
Trigger: GGTTCTGCTCTGAGATGGTCAGAGAAGATGCGGGCC...CCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR TCA 90 bp ATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCAGGGGCTGTAATGACTaGCCTCTGTCAATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: ICHIRVPKTGHLRRYSWSRGCND*PLSISP
Trigger: TGGGCTGATTGACAGAGGTCAGTCATTACAGCCCCT...GGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR CCA 90 bp CTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCAGGCAAAATAAAGGCCCCTaGGCTGTTACTGTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: LFQHLAPQTDCEDGSSIRQNKGP*AVTVPS
Trigger: AGAGGGAACAGTAACAGCCCAGGGGCCTTTATTTTG...CCTGATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR CAA 90 bp TGGATCCCAGCTCTTTGGAAGACAATCCTTCCTCCAGTGGTGAACTaGAGCTGCACACACAATGCAGGAGGGCTACAGAGCACAGTTCTG +
Preference number: 2 (lower is better)
Translates to: WIPALWKTILPPVVN*SCTHNAGGLQSTVL
Trigger: CAGAACTGTGCTCTGTAGCCCTCCTGCATTGTGTGTGCAGCTCAAGTTCACCACTGGAGGAAGGATTGTCTTCCAAAGAGCTGGGATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR CAA 90 bp AGAGCTTCAGGCACAGCTGGGTTCACAGCTGCACCATTTGGAGCATaGGGCTCATTAATATTCATGAGCCATCCCCACCAATCGGCAGAG +
Preference number: 2 (lower is better)
Translates to: RASGTAGFTAAPFGA*GSLIFMSHPHQSAE
Trigger: CTCTGCCGATTGGTGGGGATGGCTCATGAATATTAATGAGCCCAATGCTCCAAATGGTGCAGCTGTGAACCCAGCTGTGCCTGAAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR-3UTR TCA 90 bp CACACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTGGCACTCGGCTCCTACCAGCCCAAGCAGAGGTaGCTAGAAGACACTAAGCAG +
Preference number: 2 (lower is better)
Translates to: HTNLRVEQCRMPVALGSYQPKQR*LEDTKQ
Trigger: CTGCTTAGTGTCTTCTAGTCACCTCTGCTTGGGCTG...GTAGGAGCCGAGTGCCACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR TCA 90 bp CATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAGGGGCTGTAATGACTaGCCTCTGTCAATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: HTGPQNWSPEEILLVLHTRGCND*PLSISP
Trigger: TGGGCTGATTGACAGAGGTCAGTCATTACAGCCCCT...TGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR TCA 90 bp CATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACACCAAAACTGGTCACCTaGGGAGATACTCCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: HTGPQNWSPEEILLVLHTPKLVT*GDTPGP
Trigger: AGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGG...TGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR GCA 90 bp GGCTCATTAATATTCATGAGCCATCCCCACCAATCGGCAGAGCGGATGCCATTAGAGCTGCACACACAATaGAGGAGGGCTACAGAGCAC +
Preference number: 2 (lower is better)
Translates to: GSLIFMSHPHQSAERMPLELHTQ*RRATEH
Trigger: GTGCTCTGTAGCCCTCCTGCATTGTGTGTGCAGCTC...TAATGGCATCCGCTCTGCCGATTGGTGGGGATGGCTCATGAATATTAATGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR-3UTR TCA 90 bp CTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACGTGCCCAGTCCCACCTaGGTAAGTCTCCTGGCCCGC +
Preference number: 2 (lower is better)
Translates to: LFKSNSPCVLCLTYKHLHVPSPT*VSLLAR
Trigger: GCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCAC...GTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR TCA 90 bp CTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCAGGTACAGAGCACAGTTCTaGAGCATTATTTCCACACTG +
Preference number: 2 (lower is better)
Translates to: LFQHLAPQTDCEDGSSIRYRAQF*SIISTL
Trigger: CAGTGTGGAAATAATGCTTCAGAACTGTGCTCTGTA...CCTGATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR TCA 90 bp GCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGACACGTCGTCGCTTCTCAATaGACTCATCTGAGGTGCCGA +
Preference number: 2 (lower is better)
Translates to: AVMTDLCQSAQAEVTRRHVVASQ*THLRCR
Trigger: TCGGCACCTCAGATGAGTTCATTGAGAAGCGACGAC...GTGTCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581705.5
3UTR-3UTR GCA 90 bp ACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGGAGCTGCACACACAATaGAGGAGGGCTACAGAGCAC +
Preference number: 2 (lower is better)
Translates to: TNFISLSAPGTSDRLRGWELHTQ*RRATEH
Trigger: GTGCTCTGTAGCCCTCCTGCATTGTGTGTGCAGCTC...CCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR GCA 90 bp TGCCGAAGAAGGTTGACTTCCCAGGAAGTTCAGGAACAGGCACCAAACCAGCATCTTTGCAGGAATAGGTaGAACTGGCTGTCTGACAGG +
Preference number: 2 (lower is better)
Translates to: CRRRLTSQEVQEQAPNQHLCRNR*NWLSDR
Trigger: CCTGTCAGACAGCCAGTTGCACCTATTCCTGCAAAG...ATGCTGGTTTGGTGCCTGTTCCTGAACTTCCTGGGAAGTCAACCTTCTTCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583320.5
3UTR-3UTR GCA 90 bp CTCTCTTCCTGGGCCCAGCCACAGTTTGACATAGCATATCGAAGAATGGCATCAACCGAGAGCTGGCTTTaGAGGAATAGGTGCAACTGG +
Preference number: 2 (lower is better)
Translates to: LSSWAQPQFDIAYRRMASTESWL*RNRCNW
Trigger: CCAGTTGCACCTATTCCTGCAAAGCCAGCTCTCGGT...TGATGCCATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCCCAGGAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
3UTR-3UTR CCA 90 bp TTGGAAGACAATCCTTCCTCCAGTGGTGAACTTGAGCTGCACACACAATGCAGGTGTTACTGTTCCCTCTaGCTGTGGCCAGCCACTTCT +
Preference number: 2 (lower is better)
Translates to: LEDNPSSSGELELHTQCRCYCSL*LWPATS
Trigger: AGAAGTGGCTGGCCACAGCCAGAGGGAACAGTAACA...CCTGCATTGTGTGTGCAGCTCAAGTTCACCACTGGAGGAAGGATTGTCTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR CCA 90 bp TTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCTGGATCCCAGCTCTTTaGAAGACAATCCTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: FLFQHLAPQTDCEDGSSIWIPAL*KTILPP
Trigger: TGGAGGAAGGATTGTCTTCCAAAGAGCTGGGATCCA...GATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR TCA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCGTGCCCAGTCCCACCTaGGTAAGTCTCCTGGCCCGC +
Preference number: 2 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFVPSPT*VSLLAR
Trigger: GCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCAC...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR TCA 90 bp ACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACCAGCCCAAGCAGAGGTaGCTAGAAGACACTAAGCAG +
Preference number: 2 (lower is better)
Translates to: TGHLRRYSWSYIQMTCRNQPKQR*LEDTKQ
Trigger: CTGCTTAGTGTCTTCTAGTCACCTCTGCTTGGGCTG...GTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR TCA 90 bp CTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATAGGGGCTGTAATGACTaGCCTCTGTCAATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: LPQTKCSRATAKTEASQDRGCND*PLSISP
Trigger: TGGGCTGATTGACAGAGGTCAGTCATTACAGCCCCT...ATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR TCA 90 bp CAAGAGGCCAGCCTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAACCACTCCCAGTGGGATaGTGTTCAATATGGCAGCTT +
Preference number: 2 (lower is better)
Translates to: QEASLPQTKCSRATAKTEPLPVG*CSIWQL
Trigger: AAGCTGCCATATTGAACATCATCCCACTGGGAGTGG...TTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAGGCTGGCCTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR TCA 90 bp GCCCAGCCACAGTTTGACATAGCATATCGAAGAATGGCATCAGACACAGTCATGGTCGTCGCTTCTCAATaGACTCATCTGAGGTGCCGA +
Preference number: 2 (lower is better)
Translates to: AQPQFDIAYRRMASDTVMVVASQ*THLRCR
Trigger: TCGGCACCTCAGATGAGTTCATTGAGAAGCGACGAC...CATGACTGTGTCTGATGCCATTCTTCGATATGCTATGTCAAACTGTGGCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
3UTR-3UTR GCA 90 bp TTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACTCCCACAAACAAAGTaGTCTAGGGCTACAGCAAAA +
Preference number: 2 (lower is better)
Translates to: LPHTGPQNWSPEEILLVLLPQTK*SRATAK
Trigger: TTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAG...TAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR GCA 90 bp TCTTCCTGGGCCCAGCCACAGTTTGACATAGCATATCGAAGAATGGCATCAGACACCTTTTCAAGGAAGTaGTGCAGACCTTGTCGTCGC +
Preference number: 2 (lower is better)
Translates to: SSWAQPQFDIAYRRMASDTFSRK*CRPCRR
Trigger: GCGACGACAAGGTCTGCAGCACTTCCTTGAAAAGGT...GTCTGATGCCATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCCCAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
3UTR-3UTR GCA 90 bp TGCCGAAGAAGGTTGACTTCCCAGGAAGTTCAGGAACAGGCACCAAACCAGCATAGGAGAACCACACTCTaGAGGACCTTTTCAAGGAAG +
Preference number: 2 (lower is better)
Translates to: CRRRLTSQEVQEQAPNQHRRTTL*RTFSRK
Trigger: CTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCT...ATGCTGGTTTGGTGCCTGTTCCTGAACTTCCTGGGAAGTCAACCTTCTTCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583320.5
3UTR-3UTR CCA 90 bp CATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACACAGTATTTGTTCCCATaGAAGAGGCATAAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: HTGPQNWSPEEILLVLHTQYLFP*KRHKGL
Trigger: CAGCCCCTTATGCCTCTTCCATGGGAACAAATACTG...TGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR CCA 90 bp CTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATACGGGTCCCCAAAACTaGTCACCTGAGGAGATACTC +
Preference number: 2 (lower is better)
Translates to: LPQTKCSRATAKTEASQDTGPQN*SPEEIL
Trigger: GAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGT...ATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR CCA 90 bp TTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCCATAACCACTCCCAGTaGGATGATGTTCAATATGGC +
Preference number: 2 (lower is better)
Translates to: FLFQHLAPQTDCEDGSSIHNHSQ*DDVQYG
Trigger: GCCATATTGAACATCATCCCACTGGGAGTGGTTATG...GATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR CAA 90 bp GCAGGAAAGAGGGATGAATACCAGCCAGGGCTTTGCATCTGCCTGTaGACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGA +
Preference number: 2 (lower is better)
Translates to: AGKRDEYQPGLCICL*TNFISLSAPGTSDR
Trigger: TCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGTCAACAGGCAGATGCAAAGCCCTGGCTGGTATTCATCCCTCTTTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR-3UTR TCA 90 bp CAGCCAGGGCTTTGCATCTGCCTGTTGACAAACTTTATTTCTCTTTCAGCACCTCAGCCCAAGCAGAGGTaGCTAGAAGACACTAAGCAG +
Preference number: 2 (lower is better)
Translates to: QPGLCICLLTNFISLSAPQPKQR*LEDTKQ
Trigger: CTGCTTAGTGTCTTCTAGTCACCTCTGCTTGGGCTG...AGGTGCTGAAAGAGAAATAAAGTTTGTCAACAGGCAGATGCAAAGCCCTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR-3UTR TCA 90 bp AACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAAAGGGGCTGTAATGACTaGCCTCTGTCAATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: NWSPEEILLVLHTNDLQKRGCND*PLSISP
Trigger: TGGGCTGATTGACAGAGGTCAGTCATTACAGCCCCT...TTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR TCA 90 bp ACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTGGCACTCGGCTCCTACCAGGGTCCTACATACAAATaGCCTGCAGAAACTCAGATC +
Preference number: 2 (lower is better)
Translates to: TNLRVEQCRMPVALGSYQGPTYK*PAETQI
Trigger: GATCTGAGTTTCTGCAGGTCATTTGTATGTAGGACC...CTGGTAGGAGCCGAGTGCCACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR TCA 90 bp CAGCAGCAGGAGTCACAGCACCAGTTCCATTCAGTGGTATCAGTGAAAGAAAAACCAAAACTGGTCACCTaGGGAGATACTCCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: QQQESQHQFHSVVSVKEKPKLVT*GDTPGP
Trigger: AGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGG...TTTTTCTTTCACTGATACCACTGAATGGAACTGGTGCTGTGACTCCTGCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR GCA 90 bp GTTGACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGCTGGAGGCAGGGAGCTaGTACCAAAGGAGAAGAAAA +
Preference number: 2 (lower is better)
Translates to: VDKLYFSFSTWHLRQTARLEAGS*YQRRRK
Trigger: TTTTCTTCTCCTTTGGTAGCAGCTCCCTGCCTCCAG...CCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR GCA 90 bp TCTTCCTGGGCCCAGCCACAGTTTGACATAGCATATCGAAGAATGGCATCAGACTTTTCAAGGAAGTGCTaGAGACCTTGTCGTCGCTTC +
Preference number: 2 (lower is better)
Translates to: SSWAQPQFDIAYRRMASDFSRKC*RPCRRF
Trigger: GAAGCGACGACAAGGTCTGCAGCACTTCCTTGAAAA...GTCTGATGCCATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCCCAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
3UTR-3UTR GCA 90 bp CCTTGTCGTCGCTTCTCAATGAACTCATCTGAGGTGCCGAAGAAGGTTGACTTCAGGAGAACCACACTCTaGAGGACCTTTTCAAGGAAG +
Preference number: 2 (lower is better)
Translates to: PCRRFSMNSSEVPKKVDFRRTTL*RTFSRK
Trigger: CTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCT...GAAGTCAACCTTCTTCGGCACCTCAGATGAGTTCATTGAGAAGCGACGACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
3UTR-3UTR CCA 90 bp GGCTCATTAATATTCATGAGCCATCCCCACCAATCGGCAGAGCGGATGCCATTACAGTATTTGTTCCCATaGAAGAGGCATAAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GSLIFMSHPHQSAERMPLQYLFP*KRHKGL
Trigger: CAGCCCCTTATGCCTCTTCCATGGGAACAAATACTG...TAATGGCATCCGCTCTGCCGATTGGTGGGGATGGCTCATGAATATTAATGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR-3UTR CCA 90 bp CTCTCTTCCTGGGCCCAGCCACAGTTTGACATAGCATATCGAAGAATGGCATCACAGTATTTGTTCCCATaGAAGAGGCATAAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: LSSWAQPQFDIAYRRMASQYLFP*KRHKGL
Trigger: CAGCCCCTTATGCCTCTTCCATGGGAACAAATACTG...TGATGCCATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCCCAGGAAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581705.5
3UTR-3UTR CCA 90 bp CATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACACATAACCACTCCCAGTaGGATGATGTTCAATATGGC +
Preference number: 2 (lower is better)
Translates to: HTGPQNWSPEEILLVLHTHNHSQ*DDVQYG
Trigger: GCCATATTGAACATCATCCCACTGGGAGTGGTTATG...TGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR TCA 90 bp TTGGAAGACAATCCTTCCTCCAGTGGTGAACTTGAGCTGCACACACAATGCAGGGGTCCTACATACAAATaGCCTGCAGAAACTCAGATC +
Preference number: 2 (lower is better)
Translates to: LEDNPSSSGELELHTQCRGPTYK*PAETQI
Trigger: GATCTGAGTTTCTGCAGGTCATTTGTATGTAGGACC...CCTGCATTGTGTGTGCAGCTCAAGTTCACCACTGGAGGAAGGATTGTCTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR GCA 90 bp GTTGACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGTGGCAGCTTAGAATTTaGCACATACGGGTCCCCAAA +
Preference number: 2 (lower is better)
Translates to: VDKLYFSFSTWHLRQTARWQLRI*HIRVPK
Trigger: TTTGGGGACCCGTATGTGGCAAATTCTAAGCTGCCA...CCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR CCA 90 bp GAGGGGAAGGATCACACACACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTCAGTATTTGTTCCCATaGAAGAGGCATAAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: EGKDHTHKPKSRAMQNACQYLFP*KRHKGL
Trigger: CAGCCCCTTATGCCTCTTCCATGGGAACAAATACTG...ACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGTGTGTGTGATCCTTCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR TCA 90 bp TCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCAGGCCCGCATCTTCTCTaGCCATCTCAGAGCAGAACC +
Preference number: 2 (lower is better)
Translates to: SVQKQQPLCLMFNLQTSAGPHLL*PSQSRT
Trigger: GGTTCTGCTCTGAGATGGTCAGAGAAGATGCGGGCC...TGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR CCA 90 bp CAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAACTGAGGAGATACTCCTaGTCCTACATACAAATGACC +
Preference number: 2 (lower is better)
Translates to: QSALGLQQKLKPAKMGIQLRRYS*SYIQMT
Trigger: GGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAG...TTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR CCA 90 bp GAATACCAGCCAGGGCTTTGCATCTGCCTGTTGACAAACTTTATTTCTCTTTCAACGGGTCCCCAAAACTaGTCACCTGAGGAGATACTC +
Preference number: 2 (lower is better)
Translates to: EYQPGLCICLLTNFISLSTGPQN*SPEEIL
Trigger: GAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGT...TGAAAGAGAAATAAAGTTTGTCAACAGGCAGATGCAAAGCCCTGGCTGGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR-3UTR TCA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCGTGCAACTGGCTGTCTaGCAGGAGAACCACACTCTG +
Preference number: 2 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFVQLAV*QENHTL
Trigger: CAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCAC...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581705.5
3UTR-3UTR GCA 90 bp GTTGACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGTACATACAAATGACCTaGAGAAACTCAGATCCCAGG +
Preference number: 2 (lower is better)
Translates to: VDKLYFSFSTWHLRQTARYIQMT*RNSDPR
Trigger: CCTGGGATCTGAGTTTCTGCAGGTCATTTGTATGTA...CCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR GCA 90 bp ACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACATACATACAAATGACCTaGAGAAACTCAGATCCCAGG +
Preference number: 2 (lower is better)
Translates to: TKCSRATAKTEASQDGDTYIQMT*RNSDPR
Trigger: CCTGGGATCTGAGTTTCTGCAGGTCATTTGTATGTA...TGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR GCA 90 bp CTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACACCGAGAGCTGGCTTTaGAGGAATAGGTGCAACTGG +
Preference number: 2 (lower is better)
Translates to: LFKSNSPCVLCLTYKHLHTESWL*RNRCNW
Trigger: CCAGTTGCACCTATTCCTGCAAAGCCAGCTCTCGGT...GTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581705.5
3UTR-3UTR CCA 90 bp CAGCAGCAGGAGTCACAGCACCAGTTCCATTCAGTGGTATCAGTGAAAGAAAAACTGAGGAGATACTCCTaGTCCTACATACAAATGACC +
Preference number: 2 (lower is better)
Translates to: QQQESQHQFHSVVSVKEKLRRYS*SYIQMT
Trigger: GGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAG...TTTTTCTTTCACTGATACCACTGAATGGAACTGGTGCTGTGACTCCTGCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR TCA 90 bp GGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTAGGGGCTGTAATGACTaGCCTCTGTCAATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: GSVQKQQPLCLMFNLQTSRGCND*PLSISP
Trigger: TGGGCTGATTGACAGAGGTCAGTCATTACAGCCCCT...AGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR GCA 90 bp AAGGATCACACACACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTGGCACTTACATACAAATGACCTaGAGAAACTCAGATCCCAGG +
Preference number: 2 (lower is better)
Translates to: KDHTHKPKSRAMQNACGTYIQMT*RNSDPR
Trigger: CCTGGGATCTGAGTTTCTGCAGGTCATTTGTATGTA...AGTGCCACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGTGTGTGTGATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR GCA 90 bp GGCTCATTAATATTCATGAGCCATCCCCACCAATCGGCAGAGCGGATGCCATTACTGACATTTTGGATTTaGCTCTGTAGGTTTTCTATC +
Preference number: 2 (lower is better)
Translates to: GSLIFMSHPHQSAERMPLLTFWI*LCRFSI
Trigger: GATAGAAAACCTACAGAGGCAAATCCAAAATGTCAG...TAATGGCATCCGCTCTGCCGATTGGTGGGGATGGCTCATGAATATTAATGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR-3UTR TCA 90 bp CTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATCAGCCCAAGCAGAGGTaGCTAGAAGACACTAAGCAG +
Preference number: 2 (lower is better)
Translates to: LMFNLQTSAQYLFPWKRHQPKQR*LEDTKQ
Trigger: CTGCTTAGTGTCTTCTAGTCACCTCTGCTTGGGCTG...ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR TCA 90 bp ATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGCAGCCCAAGCAGAGGTaGCTAGAAGACACTAAGCAG +
Preference number: 2 (lower is better)
Translates to: MFNLQTSAQYLFPWKRHKQPKQR*LEDTKQ
Trigger: CTGCTTAGTGTCTTCTAGTCACCTCTGCTTGGGCTG...CTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR TCA 90 bp TTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGGCTGTAATGACTaGCCTCTGTCAATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: LCLTYKHLHSICSHGRGIRGCND*PLSISP
Trigger: TGGGCTGATTGACAGAGGTCAGTCATTACAGCCCCT...TATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR GCA 90 bp GTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGTTTTCAAGGAAGTGCTaGAGACCTTGTCGTCGCTTC +
Preference number: 2 (lower is better)
Translates to: VLFKSNSPCVLCLTYKHLFSRKC*RPCRRF
Trigger: GAAGCGACGACAAGGTCTGCAGCACTTCCTTGAAAA...CAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581705.5
3UTR-3UTR CCA 90 bp GTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCAGTATTTGTTCCCATaGAAGAGGCATAAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: VLFKSNSPCVLCLTYKHLQYLFP*KRHKGL
Trigger: CAGCCCCTTATGCCTCTTCCATGGGAACAAATACTG...CAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR CCA 90 bp ATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGCAAAATAAAGGCCCCTaGGCTGTTACTGTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: MFNLQTSAQYLFPWKRHKQNKGP*AVTVPS
Trigger: AGAGGGAACAGTAACAGCCCAGGGGCCTTTATTTTG...CTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR GCA 90 bp ATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGTACATACAAATGACCTaGAGAAACTCAGATCCCAGG +
Preference number: 2 (lower is better)
Translates to: MFNLQTSAQYLFPWKRHKYIQMT*RNSDPR
Trigger: CCTGGGATCTGAGTTTCTGCAGGTCATTTGTATGTA...CTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
3UTR-3UTR TCA 90 bp ATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGATTCAGTGGTATCAGTaGAAGAAAAAGCAAGGAGGT +
Preference number: 2 (lower is better)
Translates to: MFNLQTSAQYLFPWKRHKIQWYQ*KKKQGG
Trigger: ACCTCCTTGCTTTTTCTTTCACTGATACCACTGAAT...CTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR GCA 72 bp GAGCCCTCTCTTTCAGGCAGGCAGAAACAAAGCCCTTaGACCCCACTGCACTGCGCAACACAGCAGAGACGC +
Preference number: 3 (lower is better)
Translates to: EPSLSGRQKQSP*TPLHCATQQRR
Trigger: GCGTCTCTGCTGTGTTGCGCAGTGCAGTGGGGTGCAAGGGCTTTGTTTCTGCCTGCCTGAAAGAGAGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR CCA 72 bp ACAGCCCGGGACAGCCTTTCCCAAAATAAAGGCCCCTaGGCTGTTACTGTTCCCTCTGGCTGTGGCCAGCCA +
Preference number: 3 (lower is better)
Translates to: TARDSLSQNKGP*AVTVPSGCGQP
Trigger: TGGCTGGCCACAGCCAGAGGGAACAGTAACAGCCCAGGGGCCTTTATTTTGGGAAAGGCTGTCCCGGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR CCA 72 bp GGCACCGAGAGCTGGCTTTGCAGGAATAGGTGCAACTaGCTGTCTGACAGGAGAACCACACTCTGCAGGACC +
Preference number: 3 (lower is better)
Translates to: GTESWLCRNRCN*LSDRRTTLCRT
Trigger: GGTCCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCCTGCAAAGCCAGCTCTCGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
3UTR-3UTR CAA 90 bp CTTTCTCAGCCACACGAACTCACGGTAGCGGCGCCGCACACAGGAAGTCTTGGCGAAGTGCTGCAGACCTaGTCGTCGCTTCTCAATGAA +
Preference number: 3 (lower is better)
Translates to: LSQPHELTVAAPHTGSLGEVLQT*SSLLNE
Trigger: TTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTC...GCCAAGACTTCCTGTGTGCGGCGCCGCTACCGTGAGTTCGTGTGGCTGAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583320.5
3UTR-3UTR CAA 90 bp CTTTCTCAGCCACACGAACTCACGGTAGCGGCGCCGCACACAGGAAGTCTTGGCGTAAAGGCTTTGCTGTaGGTCTGTAATCCCAGCTAC +
Preference number: 3 (lower is better)
Translates to: LSQPHELTVAAPHTGSLGVKALL*VCNPSY
Trigger: GTAGCTGGGATTACAGACCAACAGCAAAGCCTTTAC...GCCAAGACTTCCTGTGTGCGGCGCCGCTACCGTGAGTTCGTGTGGCTGAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583320.5
3UTR-3UTR CAA 90 bp GAGGGAGAGCTCCTCCTACCCGATCTTGGAAGAAAGCAGCAACTCTTAGGCTGGAGGTGCCGAAGAAGGTaGACTTCCCAGGAAGTTCAG +
Preference number: 3 (lower is better)
Translates to: EGELLLPDLGRKQQLLGWRCRRR*TSQEVQ
Trigger: CTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACCT...CCAGCCTAAGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGGAGCTCTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583320.5
3UTR TCA 72 bp TCCCACCTGAGTAAGTCTCCTGGCCCGCATCTTCTCTaGCCATCTCAGAGCAGAACCCAGAGCTCACTTTTC +
Preference number: 3 (lower is better)
Translates to: SHLSKSPGPHLL*PSQSRTQSSLF
Trigger: GAAAAGTGAGCTCTGGGTTCTGCTCTGAGATGGTCAGAGAAGATGCGGGCCAGGAGACTTACTCAGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581705.5
3UTR CCA 72 bp CTGGAAGTTTCGAGATCAGAGAGCTTCAGGCACAGCTaGGTTCACAGCTGCACCATTTGGAGCATTGGGCTC +
Preference number: 3 (lower is better)
Translates to: LEVSRSESFRHS*VHSCTIWSIGL
Trigger: GAGCCCAATGCTCCAAATGGTGCAGCTGTGAACCCAGCTGTGCCTGAAGCTCTCTGATCTCGAAACTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR-3UTR CAA 90 bp GAGGCGGTGAGGGAGAGCTCCTCCTACCCGATCTTGGAAGAAAGCAGCAACTCTTTGGCAGTAAAGGCTTaGCTGTTGGTCTGTAATCCC +
Preference number: 3 (lower is better)
Translates to: EAVRESSSYPILEESSNSLAVKA*LLVCNP
Trigger: GGGATTACAGACCAACAGCAAAGCCTTTACTGCCAA...AGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGGAGCTCTCCCTCACCGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583320.5
3UTR TCA 72 bp CAAGGAAGTGCTGCAGACCTTGTCGTCGCTTCTCAATaGACTCATCTGAGGTGCCGAAGAAGGTTGACTTCC +
Preference number: 3 (lower is better)
Translates to: QGSAADLVVASQ*THLRCRRRLTS
Trigger: GGAAGTCAACCTTCTTCGGCACCTCAGATGAGTTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTCCTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
3UTR GCA 72 bp TGGAAGACAATCCTTCCTCCAGTGGTGAACTTGAGCTaGACACACAATGCAGGAGGGCTACAGAGCACAGTT +
Preference number: 3 (lower is better)
Translates to: WKTILPPVVNLS*THNAGGLQSTV
Trigger: AACTGTGCTCTGTAGCCCTCCTGCATTGTGTGTGCAGCTCAAGTTCACCACTGGAGGAAGGATTGTCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR CCA 72 bp GCCCAGAACTGTGAGAAGAGTTGGATCCCAGCTCTTTaGAAGACAATCCTTCCTCCAGTGGTGAACTTGAGC +
Preference number: 3 (lower is better)
Translates to: AQNCEKSWIPAL*KTILPPVVNLS
Trigger: GCTCAAGTTCACCACTGGAGGAAGGATTGTCTTCCAAAGAGCTGGGATCCAACTCTTCTCACAGTTCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR TCA 72 bp AAGAATGGCAGCAGGAGGACAGAATGCCTCATTGTCTaGAGGAGAGCGTGTTGTTTCTCATCTCCATCCCCA +
Preference number: 3 (lower is better)
Translates to: KNGSRRTECLIV*RRACCFSSPSP
Trigger: TGGGGATGGAGATGAGAAACAACACGCTCTCCTTCAGACAATGAGGCATTCTGTCCTCCTGCTGCCATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR CCA 72 bp CGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTaGTCCTACATACAAATGACCTGCAGAAACTCAGAT +
Preference number: 3 (lower is better)
Translates to: RVPKTGHLRRYS*SYIQMTCRNSD
Trigger: ATCTGAGTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
3UTR CCA 72 bp CCTAACAAGGTTCACGCCCAGAACTGTGAGAAGAGTTaGATCCCAGCTCTTTGGAAGACAATCCTTCCTCCA +
Preference number: 3 (lower is better)
Translates to: PNKVHAQNCEKS*IPALWKTILPP
Trigger: TGGAGGAAGGATTGTCTTCCAAAGAGCTGGGATCCAACTCTTCTCACAGTTCTGGGCGTGAACCTTGTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR CCA 72 bp AGCTTCAGGCACAGCTGGGTTCACAGCTGCACCATTTaGAGCATTGGGCTCATTAATATTCATGAGCCATCC +
Preference number: 3 (lower is better)
Translates to: SFRHSWVHSCTI*SIGLINIHEPS
Trigger: GGATGGCTCATGAATATTAATGAGCCCAATGCTCCAAATGGTGCAGCTGTGAACCCAGCTGTGCCTGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR-3UTR CAA 90 bp ACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTGGCACTCGGCTCCTACCAGACATCTGCACAGTATTaGTTCCCATGGAAGAGGCAT +
Preference number: 3 (lower is better)
Translates to: TNLRVEQCRMPVALGSYQTSAQY*FPWKRH
Trigger: ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGT...CTGGTAGGAGCCGAGTGCCACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR-3UTR CAA 90 bp CAGCCAGGGCTTTGCATCTGCCTGTTGACAAACTTTATTTCTCTTTCAGCACCTCTGAAGGAGAGCGTGTaGTTTCTCATCTCCATCCCC +
Preference number: 3 (lower is better)
Translates to: QPGLCICLLTNFISLSAPLKESV*FLISIP
Trigger: GGGGATGGAGATGAGAAACAACACGCTCTCCTTCAG...AGGTGCTGAAAGAGAAATAAAGTTTGTCAACAGGCAGATGCAAAGCCCTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR-3UTR CAA 90 bp CAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGGAAGTGCTGCAGACCTaGTCGTCGCTTCTCAATGAA +
Preference number: 3 (lower is better)
Translates to: QNWSPEEILLVLHTNDLQEVLQT*SSLLNE
Trigger: TTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTC...CTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581705.5
3UTR TCA 72 bp GGGATGAATACCAGCCAGGGCTTTGCATCTGCCTGTTaGCAAACTTTATTTCTCTTTCAGCACCTGGCACCT +
Preference number: 3 (lower is better)
Translates to: GMNTSQGFASAC*QTLFLFQHLAP
Trigger: AGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGTCAACAGGCAGATGCAAAGCCCTGGCTGGTATTCATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR GCA 72 bp AGAACCACACTCTGCAGGACCTTTTCAAGGAAGTGCTaGAGACCTTGTCGTCGCTTCTCAATGAACTCATCT +
Preference number: 3 (lower is better)
Translates to: RTTLCRTFSRKC*RPCRRFSMNSS
Trigger: AGATGAGTTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
3UTR-3UTR CAA 90 bp AAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAACAACATCTGCACAGTATTaGTTCCCATGGAAGAGGCAT +
Preference number: 3 (lower is better)
Translates to: KCSRATAKTEASQDGDTTTSAQY*FPWKRH
Trigger: ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGT...TGTTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR CAA 90 bp CTCAGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGACATCTGCACAGTATTaGTTCCCATGGAAGAGGCAT +
Preference number: 3 (lower is better)
Translates to: LRSQESNIGFCSKATAPVTSAQY*FPWKRH
Trigger: ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGT...CACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
3UTR GCA 72 bp CGGGCAGGAAAGAGGGATGAATACCAGCCAGGGCTTTaGATCTGCCTGTTGACAAACTTTATTTCTCTTTCA +
Preference number: 3 (lower is better)
Translates to: RAGKRDEYQPGL*ICLLTNFISLS
Trigger: TGAAAGAGAAATAAAGTTTGTCAACAGGCAGATGCAAAGCCCTGGCTGGTATTCATCCCTCTTTCCTGCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR GCA 72 bp AGATCAGAGAGCTTCAGGCACAGCTGGGTTCACAGCTaGACCATTTGGAGCATTGGGCTCATTAATATTCAT +
Preference number: 3 (lower is better)
Translates to: RSESFRHSWVHS*TIWSIGLINIH
Trigger: ATGAATATTAATGAGCCCAATGCTCCAAATGGTGCAGCTGTGAACCCAGCTGTGCCTGAAGCTCTCTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
3UTR CCA 72 bp CCAGCCAAGATGGGGATACAACATAACCACTCCCAGTaGGATGATGTTCAATATGGCAGCTTAGAATTTGCC +
Preference number: 3 (lower is better)
Translates to: PAKMGIQHNHSQ*DDVQYGSLEFA
Trigger: GGCAAATTCTAAGCTGCCATATTGAACATCATCCCACTGGGAGTGGTTATGTTGTATCCCCATCTTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
3UTR-3UTR CAA 90 bp ATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGCATGACCATGAGCTGTaGTGCAGGTCTCAGGCTCCA +
Preference number: 3 (lower is better)
Translates to: MFNLQTSAQYLFPWKRHKHDHEL*CRSQAP
Trigger: TGGAGCCTGAGACCTGCACAACAGCTCATGGTCATG...CTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp GTAGCTGCTTTCTCAGCCACACGAACTCACGGTAGCGGCGCCGCACACAGGAAGTCGCCGGTGCCCCGGTaGACGACGGGAGACGCCCCA +
Preference number: 4 (lower is better)
Translates to: VAAFSATRTHGSGAAHRKSPVPR*TTGDAP
Trigger: TGGGGCGTCTCCCGTCGTGCACCGGGGCACCGGCGA...CTTCCTGTGTGCGGCGCCGCTACCGTGAGTTCGTGTGGCTGAGAAAGCAGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583320.5
CDS-3UTR TCA 90 bp CTTTCTCAGCCACACGAACTCACGGTAGCGGCGCCGCACACAGGAAGTCTTGGCGCTTCTCCTTCCGGGTaGGTCGCCGGTGCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: LSQPHELTVAAPHTGSLGASPSG*VAGAPV
Trigger: CACCGGGGCACCGGCGACTCACCCGGAAGGAGAAGC...GCCAAGACTTCCTGTGTGCGGCGCCGCTACCGTGAGTTCGTGTGGCTGAGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583320.5
CDS-3UTR GCA 90 bp GAGCCCTCTCTTTCAGGCAGGCAGAAACAAAGCCCTTGCACCCCACTGCACTGCTGGGACGCCGGAGAGTaGACGCAGGTGCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: EPSLSGRQKQSPCTPLHCWDAGE*TQVPGE
Trigger: CTCACCCGGCACCTGCGTGCACTCTCCGGCGTCCCA...GCAGTGCAGTGGGGTGCAAGGGCTTTGTTTCTGCCTGCCTGAAAGAGAGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393405.6
CDS-3UTR GCA 90 bp GGAGCCCACACTTCTAAATGGTCCTTTTCTTCACTGGGAGGCGGTGAGGGAGAGCGGGTGAGTCGCCGGTaGCCCGGTGCACGACGGGAG +
Preference number: 4 (lower is better)
Translates to: GAHTSKWSFSSLGGGEGERVSRR*PGARRE
Trigger: CTCCCGTCGTGCACCGGGGCACCGGCGACTCACCCG...CTCTCCCTCACCGCCTCCCAGTGAAGAAAAGGACCATTTAGAAGTGTGGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581705.5
CDS-3UTR TCA 90 bp CACCCCACTGCACTGCGCAACACAGCAGAGACGCTGGTGGCGGAAGCCCTGGAGGTCGTCGCTTCTCAATaGACTCATCTGAGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: HPTALRNTAETLVAEALEVVASQ*THLRCR
Trigger: TCGGCACCTCAGATGAGTTCATTGAGAAGCGACGAC...CTCCAGGGCTTCCGCCACCAGCGTCTCTGCTGTGTTGCGCAGTGCAGTGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp GCTCCACTCAGCCAGGCTAAGGTCTCGGGACATAAATCCCCAGCAGCAGGAGTCTTCACTGGGAGGCGGTaGGGGAGAGCTCCTCCTACC +
Preference number: 4 (lower is better)
Translates to: APLSQAKVSGHKSPAAGVFTGRR*GRAPPT
Trigger: GGTAGGAGGAGCTCTCCCTCACCGCCTCCCAGTGAA...GACTCCTGCTGCTGGGGATTTATGTCCCGAGACCTTAGCCTGGCTGAGTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp AGGCTCCACTCAGCCAGGCTAAGGTCTCGGGACATAAATCCCCAGCAGCAGGAGACACAGCAGAGACGCTaGTGGCGGAAGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RLHSARLRSRDINPQQQETQQRR*WRKPWR
Trigger: CCTCCAGGGCTTCCGCCACCAGCGTCTCTGCTGTGT...CTCCTGCTGCTGGGGATTTATGTCCCGAGACCTTAGCCTGGCTGAGTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp TACCTGCCCTGTGCCCAGTCCCACCTGAGTAAGTCTCCTGGCCCGCATCTTCTCGCCCTCCTCACAGACTaGAGAGTGGAGGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: YLPCAQSHLSKSPGPHLLALLTD*RVEVPS
Trigger: AGAGGGAACCTCCACTCTTCAGTCTGTGAGGAGGGC...GAGAAGATGCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCACAGGGCAGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GCAACTGGCTGTCTGACAGGAGAACCACACTCTGCAGGACCTTTTCAAGGAAGTGCTTCTCCTTCCGGGTaGGTCGCCGGTGCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: ATGCLTGEPHSAGPFQGSASPSG*VAGAPV
Trigger: CACCGGGGCACCGGCGACTCACCCGGAAGGAGAAGC...ACTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR GCA 90 bp AATAGGTGCAACTGGCTGTCTGACAGGAGAACCACACTCTGCAGGACCTTTTCACGGGTGAGTCGCCGGTaGCCCGGTGCACGACGGGAG +
Preference number: 4 (lower is better)
Translates to: NRCNWLSDRRTTLCRTFSRVSRR*PGARRE
Trigger: CTCCCGTCGTGCACCGGGGCACCGGCGACTCACCCG...TGAAAAGGTCCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCACCTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR CCA 90 bp TACCTGCCCTGTGCCCAGTCCCACCTGAGTAAGTCTCCTGGCCCGCATCTTCTCGGTCCTTTTCTTCACTaGGAGGCGGTGAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: YLPCAQSHLSKSPGPHLLGPFLH*EAVRES
Trigger: GCTCTCCCTCACCGCCTCCCAGTGAAGAAAAGGACC...GAGAAGATGCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCACAGGGCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp GCTCCACTCAGCCAGGCTAAGGTCTCGGGACATAAATCCCCAGCAGCAGGAGTCGGCCCGGGCTCTGAGTaGGATTCCCGCTTCCGAATA +
Preference number: 4 (lower is better)
Translates to: APLSQAKVSGHKSPAAGVGPGSE*DSRFRI
Trigger: TATTCGGAAGCGGGAATCCCACTCAGAGCCCGGGCC...GACTCCTGCTGCTGGGGATTTATGTCCCGAGACCTTAGCCTGGCTGAGTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp CCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATGTGCCCAGTCCCACCTaGGTAAGTCTCCTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PHTGPQNWSPEEILLVLHVPSPT*VSLLAR
Trigger: GCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCAC...ATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp ATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACAGGCCCGGGCTCTaGGTGGGATTCCCGCTTCCG +
Preference number: 4 (lower is better)
Translates to: ICHIRVPKTGHLRRYSWSYRPGL*VGFPLP
Trigger: CGGAAGCGGGAATCCCACTCAGAGCCCGGGCCTGTA...GGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
CDS-3UTR TCA 90 bp CACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGGCTTCTCCTTCCGGGTaGGTCGCCGGTGCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: HKQSALGLQQKLKPAKMGASPSG*VAGAPV
Trigger: CACCGGGGCACCGGCGACTCACCCGGAAGGAGAAGC...CCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp CTTTCTCAGCCACACGAACTCACGGTAGCGGCGCCGCACACAGGAAGTCTTGGCGTCGTCGCTTCTCAATaGACTCATCTGAGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: LSQPHELTVAAPHTGSLGVVASQ*THLRCR
Trigger: TCGGCACCTCAGATGAGTTCATTGAGAAGCGACGAC...GCCAAGACTTCCTGTGTGCGGCGCCGCTACCGTGAGTTCGTGTGGCTGAGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583320.5
CDS-3UTR TCA 90 bp TTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCTTCACTGGGAGGCGGTaGGGGAGAGCTCCTCCTACC +
Preference number: 4 (lower is better)
Translates to: FLFQHLAPQTDCEDGSSIFTGRR*GRAPPT
Trigger: GGTAGGAGGAGCTCTCCCTCACCGCCTCCCAGTGAA...GATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp TTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTATTCACTGGGAGGCGGTaGGGGAGAGCTCCTCCTACC +
Preference number: 4 (lower is better)
Translates to: LPHTGPQNWSPEEILLVLFTGRR*GRAPPT
Trigger: GGTAGGAGGAGCTCTCCCTCACCGCCTCCCAGTGAA...TAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CCCCTCCACTCTGAACTAAATGCCATGACAGTCCCACAGCATAGGCTGGTAGTAGTGCCCAGTCCCACCTaGGTAAGTCTCCTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: PLHSELNAMTVPQHRLVVVPSPT*VSLLAR
Trigger: GCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCAC...TACTACCAGCCTATGCTGTGGGACTGTCATGGCATTTAGTTCAGAGTGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp TACCTGCCCTGTGCCCAGTCCCACCTGAGTAAGTCTCCTGGCCCGCATCTTCTCAGGGGCTGTAATGACTaGCCTCTGTCAATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: YLPCAQSHLSKSPGPHLLRGCND*PLSISP
Trigger: TGGGCTGATTGACAGAGGTCAGTCATTACAGCCCCT...GAGAAGATGCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCACAGGGCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CACACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTGGCACTCGGCTCCTACTACAGGCCCGGGCTCTaGGTGGGATTCCCGCTTCCG +
Preference number: 4 (lower is better)
Translates to: HTNLRVEQCRMPVALGSYYRPGL*VGFPLP
Trigger: CGGAAGCGGGAATCCCACTCAGAGCCCGGGCCTGTA...GTAGGAGCCGAGTGCCACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393405.6
CDS-3UTR GCA 90 bp GAGCCCTCTCTTTCAGGCAGGCAGAAACAAAGCCCTTGCACCCCACTGCACTGCGAGCTGCACACACAATaGAGGAGGGCTACAGAGCAC +
Preference number: 4 (lower is better)
Translates to: EPSLSGRQKQSPCTPLHCELHTQ*RRATEH
Trigger: GTGCTCTGTAGCCCTCCTGCATTGTGTGTGCAGCTC...GCAGTGCAGTGGGGTGCAAGGGCTTTGTTTCTGCCTGCCTGAAAGAGAGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp AACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACGGGTGAGTCGCCGGTaGCCCGGTGCACGACGGGAG +
Preference number: 4 (lower is better)
Translates to: NWSPEEILLVLHTNDLQKRVSRR*PGARRE
Trigger: CTCCCGTCGTGCACCGGGGCACCGGCGACTCACCCG...TTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
CDS-3UTR CCA 90 bp CTGCTTTCTCAGCCACACGAACTCACGGTAGCGGCGCCGCACACAGGAAGTCTTTCAGGCACCGAGAGCTaGCTTTGCAGGAATAGGTGC +
Preference number: 4 (lower is better)
Translates to: LLSQPHELTVAAPHTGSLSGTES*LCRNRC
Trigger: GCACCTATTCCTGCAAAGCCAGCTCTCGGTGCCTGA...AAGACTTCCTGTGTGCGGCGCCGCTACCGTGAGTTCGTGTGGCTGAGAAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583320.5
CDS-3UTR CCA 90 bp CTTTCTCAGCCACACGAACTCACGGTAGCGGCGCCGCACACAGGAAGTCTTGGCCATCAGACACAGTCATaGTACTTCGGCCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: LSQPHELTVAAPHTGSLGHQTQS*YFGPGH
Trigger: GTGTCCAGGGCCGAAGTACCATGACTGTGTCTGATG...GCCAAGACTTCCTGTGTGCGGCGCCGCTACCGTGAGTTCGTGTGGCTGAGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583320.5
CDS-3UTR TCA 90 bp GCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGACACGTGCCCAGTCCCACCTaGGTAAGTCTCCTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: AVMTDLCQSAQAEVTRRHVPSPT*VSLLAR
Trigger: GCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCAC...GTGTCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GCTCCACTCAGCCAGGCTAAGGTCTCGGGACATAAATCCCCAGCAGCAGGAGTCCCAAAACTGGTCACCTaGGGAGATACTCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: APLSQAKVSGHKSPAAGVPKLVT*GDTPGP
Trigger: AGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGG...GACTCCTGCTGCTGGGGATTTATGTCCCGAGACCTTAGCCTGGCTGAGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp GGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAACATAACCACTCCTACAGGCCCGGGCTCTaGGTGGGATTCCCGCTTCCG +
Preference number: 4 (lower is better)
Translates to: GLQQKLKPAKMGIQHNHSYRPGL*VGFPLP
Trigger: CGGAAGCGGGAATCCCACTCAGAGCCCGGGCCTGTA...GGAGTGGTTATGTTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp CTCTCTTCCTGGGCCCAGCCACAGTTTGACATAGCATATCGAAGAATGGCATCATACAGGCCCGGGCTCTaGGTGGGATTCCCGCTTCCG +
Preference number: 4 (lower is better)
Translates to: LSSWAQPQFDIAYRRMASYRPGL*VGFPLP
Trigger: CGGAAGCGGGAATCCCACTCAGAGCCCGGGCCTGTA...TGATGCCATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCCCAGGAAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR CCA 90 bp GCTCCACTCAGCCAGGCTAAGGTCTCGGGACATAAATCCCCAGCAGCAGGAGTCCATCAGACACAGTCATaGTACTTCGGCCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: APLSQAKVSGHKSPAAGVHQTQS*YFGPGH
Trigger: GTGTCCAGGGCCGAAGTACCATGACTGTGTCTGATG...GACTCCTGCTGCTGGGGATTTATGTCCCGAGACCTTAGCCTGGCTGAGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp AGGCTCCACTCAGCCAGGCTAAGGTCTCGGGACATAAATCCCCAGCAGCAGGAGCATCAGACACAGTCATaGTACTTCGGCCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: RLHSARLRSRDINPQQQEHQTQS*YFGPGH
Trigger: GTGTCCAGGGCCGAAGTACCATGACTGTGTCTGATG...CTCCTGCTGCTGGGGATTTATGTCCCGAGACCTTAGCCTGGCTGAGTGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp ACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACATAGCGCGGCTCCGCTaGCCAAGGCCCCGGACTGGA +
Preference number: 4 (lower is better)
Translates to: TGHLRRYSWSYIQMTCRNIARLR*PRPRTG
Trigger: TCCAGTCCGGGGCCTTGGCCAGCGGAGCCGCGCTAT...GTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
CDS-3UTR CCA 90 bp ACACAGGAAGTCTTGGCAGTAAAGGCTTTGCTGTTGGTCTGTAATCCCAGCTACATAGCGCGGCTCCGCTaGCCAAGGCCCCGGACTGGA +
Preference number: 4 (lower is better)
Translates to: TQEVLAVKALLLVCNPSYIARLR*PRPRTG
Trigger: TCCAGTCCGGGGCCTTGGCCAGCGGAGCCGCGCTAT...GTAGCTGGGATTACAGACCAACAGCAAAGCCTTTACTGCCAAGACTTCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583320.5
3UTR CAA 72 bp CGGCGCCGCACACAGGAAGTCTTGGCAGTAAAGGCTTaGCTGTTGGTCTGTAATCCCAGCTACTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: RRRTQEVLAVKA*LLVCNPSYLGG
Trigger: GCCTCCCAAGTAGCTGGGATTACAGACCAACAGCAAAGCCTTTACTGCCAAGACTTCCTGTGTGCGGCGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583320.5
CDS-3UTR TCA 90 bp CCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATGCCCTCCTCACAGACTaGAGAGTGGAGGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PHTGPQNWSPEEILLVLHALLTD*RVEVPS
Trigger: AGAGGGAACCTCCACTCTTCAGTCTGTGAGGAGGGC...ATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp AAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAACAGTGCCCAGTCCCACCTaGGTAAGTCTCCTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: KCSRATAKTEASQDGDTTVPSPT*VSLLAR
Trigger: GCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCAC...TGTTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp AGGCTCCACTCAGCCAGGCTAAGGTCTCGGGACATAAATCCCCAGCAGCAGGAGCCACTCCCAGTGGGATaGTGTTCAATATGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RLHSARLRSRDINPQQQEPLPVG*CSIWQL
Trigger: AAGCTGCCATATTGAACATCATCCCACTGGGAGTGG...CTCCTGCTGCTGGGGATTTATGTCCCGAGACCTTAGCCTGGCTGAGTGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR GCA 90 bp CACGAACTCACGGTAGCGGCGCCGCACACAGGAAGTCTTGGCAGTAAAGGCTTTACCGAGAGCTGGCTTTaGAGGAATAGGTGCAACTGG +
Preference number: 4 (lower is better)
Translates to: HELTVAAPHTGSLGSKGFTESWL*RNRCNW
Trigger: CCAGTTGCACCTATTCCTGCAAAGCCAGCTCTCGGT...AAAGCCTTTACTGCCAAGACTTCCTGTGTGCGGCGCCGCTACCGTGAGTTCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583320.5
CDS-3UTR GCA 90 bp GTAGGCAAGAGGCCAGCCTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAAGCCCTTGCACCCCACTaGACTGCGCAACACAGCAGA +
Preference number: 4 (lower is better)
Translates to: VGKRPASHKQSALGLQQKALAPH*TAQHSR
Trigger: TCTGCTGTGTTGCGCAGTGCAGTGGGGTGCAAGGGC...TTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAGGCTGGCCTCTTGCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp CAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAACCCCCTCCACTCACTTaGGACGCCGGAGAGTGCACG +
Preference number: 4 (lower is better)
Translates to: QSALGLQQKLKPAKMGIQPPPLT*DAGECT
Trigger: CGTGCACTCTCCGGCGTCCCAAGTGAGTGGAGGGGG...TTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp CTCAGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGCCCCCTCCACTCACTTaGGACGCCGGAGAGTGCACG +
Preference number: 4 (lower is better)
Translates to: LRSQESNIGFCSKATAPVPPPLT*DAGECT
Trigger: CGTGCACTCTCCGGCGTCCCAAGTGAGTGGAGGGGG...CACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp GCAACTGGCTGTCTGACAGGAGAACCACACTCTGCAGGACCTTTTCAAGGAAGTGGCCCGGGCTCTGAGTaGGATTCCCGCTTCCGAATA +
Preference number: 4 (lower is better)
Translates to: ATGCLTGEPHSAGPFQGSGPGSE*DSRFRI
Trigger: TATTCGGAAGCGGGAATCCCACTCAGAGCCCGGGCC...ACTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR TCA 90 bp GAGGGAGAGCTCCTCCTACCCGATCTTGGAAGAAAGCAGCAACTCTTAGGCTGGTTGGAAGGAAACATCTaGGAACAGCACCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: EGELLLPDLGRKQQLLGWLEGNI*EQHQLP
Trigger: GGGGAGCTGGTGCTGTTCTCAGATGTTTCCTTCCAA...CCAGCCTAAGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGGAGCTCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583320.5
CDS-3UTR TCA 90 bp CTTTGCAGGAATAGGTGCAACTGGCTGTCTGACAGGAGAACCACACTCTGCAGGGTGCAACTGGCTGTCTaGCAGGAGAACCACACTCTG +
Preference number: 4 (lower is better)
Translates to: LCRNRCNWLSDRRTTLCRVQLAV*QENHTL
Trigger: CAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCAC...CCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCCTGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR TCA 90 bp GCGAGGATGGAAGCAGCATCAGGTAAATTATACCTAACAAGGTTCACGCCCAGATTCACTGGGAGGCGGTaGGGGAGAGCTCCTCCTACC +
Preference number: 4 (lower is better)
Translates to: ARMEAASGKLYLTRFTPRFTGRR*GRAPPT
Trigger: GGTAGGAGGAGCTCTCCCTCACCGCCTCCCAGTGAA...TCTGGGCGTGAACCTTGTTAGGTATAATTTACCTGATGCTGCTTCCATCCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp GTAGGCAAGAGGCCAGCCTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAAGCCCTCCTCACAGACTaGAGAGTGGAGGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: VGKRPASHKQSALGLQQKALLTD*RVEVPS
Trigger: AGAGGGAACCTCCACTCTTCAGTCTGTGAGGAGGGC...TTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAGGCTGGCCTCTTGCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp CATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAGGCCCGCATCTTCTCTaGCCATCTCAGAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: HTGPQNWSPEEILLVLHTGPHLL*PSQSRT
Trigger: GGTTCTGCTCTGAGATGGTCAGAGAAGATGCGGGCC...TGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp AACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAAGTGCCCAGTCCCACCTaGGTAAGTCTCCTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: NWSPEEILLVLHTNDLQKVPSPT*VSLLAR
Trigger: GCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCAC...TTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp CTGCTTTCTCAGCCACACGAACTCACGGTAGCGGCGCCGCACACAGGAAGTCTTAGGAGAACCACACTCTaGAGGACCTTTTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLSQPHELTVAAPHTGSLRRTTL*RTFSRK
Trigger: CTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCT...AAGACTTCCTGTGTGCGGCGCCGCTACCGTGAGTTCGTGTGGCTGAGAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583320.5
CDS-3UTR GCA 90 bp CTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCAGGCTTTGCAGGAATAGGTaGAACTGGCTGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: LFQHLAPQTDCEDGSSIRLCRNR*NWLSDR
Trigger: CCTGTCAGACAGCCAGTTGCACCTATTCCTGCAAAG...CCTGATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp AGGCCCCTGGGCTGTTACTGTTCCCTCTGGCTGTGGCCAGCCACTTCTCTCTCACTCCCACAAACAAAGTaGTCTAGGGCTACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: RPLGCYCSLWLWPATSLSLPQTK*SRATAK
Trigger: TTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAG...TGAGAGAGAAGTGGCTGGCCACAGCCAGAGGGAACAGTAACAGCCCAGGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp CTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCAGGCTGGAGGCAGGGAGCTaGTACCAAAGGAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: LFQHLAPQTDCEDGSSIRLEAGS*YQRRRK
Trigger: TTTTCTTCTCCTTTGGTAGCAGCTCCCTGCCTCCAG...CCTGATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp GAGCCCTCTCTTTCAGGCAGGCAGAAACAAAGCCCTTGCACCCCACTGCACTGCTATGAAAGGAAATACTaGCAGCGCTCACTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: EPSLSGRQKQSPCTPLHCYERKY*QRSLPP
Trigger: AGGAGGGAGTGAGCGCTGGCAGTATTTCCTTTCATA...GCAGTGCAGTGGGGTGCAAGGGCTTTGTTTCTGCCTGCCTGAAAGAGAGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp ACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGGCTGTTGGGACGCCGGAGAGTaGACGCAGGTGCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TYKHLHSICSHGRGIRGCWDAGE*TQVPGE
Trigger: CTCACCCGGCACCTGCGTGCACTCTCCGGCGTCCCA...ACAGCCCCTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
CDS-3UTR CCA 90 bp TTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTATCAGGCACCGAGAGCTaGCTTTGCAGGAATAGGTGC +
Preference number: 4 (lower is better)
Translates to: LPHTGPQNWSPEEILLVLSGTES*LCRNRC
Trigger: GCACCTATTCCTGCAAAGCCAGCTCTCGGTGCCTGA...TAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCAGGATGGTACTTCGGCCCTaGACACAGGCTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: LFQHLAPQTDCEDGSSIRMVLRP*TQASIS
Trigger: TGAGATAGAAGCCTGTGTCCAGGGCCGAAGTACCAT...CCTGATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp GTAGGCAAGAGGCCAGCCTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAAGGTCCTTTTCTTCACTaGGAGGCGGTGAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VGKRPASHKQSALGLQQKGPFLH*EAVRES
Trigger: GCTCTCCCTCACCGCCTCCCAGTGAAGAAAAGGACC...TTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAGGCTGGCCTCTTGCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp CATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAGGTCCTTTTCTTCACTaGGAGGCGGTGAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: HTGPQNWSPEEILLVLHTGPFLH*EAVRES
Trigger: GCTCTCCCTCACCGCCTCCCAGTGAAGAAAAGGACC...TGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp TACCTGCCCTGTGCCCAGTCCCACCTGAGTAAGTCTCCTGGCCCGCATCTTCTCGCCCACACTTCTAAATaGTCCTTTTCTTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: YLPCAQSHLSKSPGPHLLAHTSK*SFSSLG
Trigger: TCCCAGTGAAGAAAAGGACCATTTAGAAGTGTGGGC...GAGAAGATGCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCACAGGGCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp TACCTGCCCTGTGCCCAGTCCCACCTGAGTAAGTCTCCTGGCCCGCATCTTCTCCTGAGGAGATACTCCTaGTCCTACATACAAATGACC +
Preference number: 4 (lower is better)
Translates to: YLPCAQSHLSKSPGPHLLLRRYS*SYIQMT
Trigger: GGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAG...GAGAAGATGCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCACAGGGCAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GCAACTGGCTGTCTGACAGGAGAACCACACTCTGCAGGACCTTTTCAAGGAAGTGGTGCCGAAGAAGGTTaGCTTCCCAGGAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: ATGCLTGEPHSAGPFQGSGAEEG*LPRKFR
Trigger: CCTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACC...ACTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR TCA 90 bp TTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTAGTCGTCGCTTCTCAATaGACTCATCTGAGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: LPHTGPQNWSPEEILLVLVVASQ*THLRCR
Trigger: TCGGCACCTCAGATGAGTTCATTGAGAAGCGACGAC...TAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GTAGGCAAGAGGCCAGCCTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAAGTGCAACTGGCTGTCTaGCAGGAGAACCACACTCTG +
Preference number: 4 (lower is better)
Translates to: VGKRPASHKQSALGLQQKVQLAV*QENHTL
Trigger: CAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCAC...TTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAGGCTGGCCTCTTGCCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp GGAATAGGTGCAACTGGCTGTCTGACAGGAGAACCACACTCTGCAGGACCTTTTGTGCAACTGGCTGTCTaGCAGGAGAACCACACTCTG +
Preference number: 4 (lower is better)
Translates to: GIGATGCLTGEPHSAGPFVQLAV*QENHTL
Trigger: CAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCAC...AAAAGGTCCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR TCA 90 bp TTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTATCTCCTTTAGCCAGGTaGGAAGAGCTCTGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LPHTGPQNWSPEEILLVLSPLAR*EELCLS
Trigger: AGAGAGGCAGAGCTCTTCTCACCTGGCTAAAGGAGA...TAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGGCCCTCCTCACAGACTaGAGAGTGGAGGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HKQSALGLQQKLKPAKMGALLTD*RVEVPS
Trigger: AGAGGGAACCTCCACTCTTCAGTCTGTGAGGAGGGC...CCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp CTCTCTTCCTGGGCCCAGCCACAGTTTGACATAGCATATCGAAGAATGGCATCATCCAAAGGCACAGCATaGTCTCCTCCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LSSWAQPQFDIAYRRMASSKGTA*SPPTAL
Trigger: GAGGGCTGTGGGAGGAGATCATGCTGTGCCTTTGGA...TGATGCCATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCCCAGGAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581705.5
CDS-3UTR TCA 90 bp TTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTAAGGGGCTGTAATGACTaGCCTCTGTCAATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LPHTGPQNWSPEEILLVLRGCND*PLSISP
Trigger: TGGGCTGATTGACAGAGGTCAGTCATTACAGCCCCT...TAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp ATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCACCGAGAGCTGGCTTTaGAGGAATAGGTGCAACTGG +
Preference number: 4 (lower is better)
Translates to: ICHIRVPKTGHLRRYSWSTESWL*RNRCNW
Trigger: CCAGTTGCACCTATTCCTGCAAAGCCAGCTCTCGGT...GGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp CACACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTGGCACTCGGCTCCTACTCATCCCCCTGTCCATaGAAGGAGGTAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: HTNLRVEQCRMPVALGSYSSPCP*KEVGKR
Trigger: CCTCTTGCCTACCTCCTTGCATGGACAGGGGGATGA...GTAGGAGCCGAGTGCCACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp GGGGCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGACAGAAACAAAGCCCTTaGACCCCACTGCACTGCGCA +
Preference number: 4 (lower is better)
Translates to: GAVMTDLCQSAQAEVTRRQKQSP*TPLHCA
Trigger: TGCGCAGTGCAGTGGGGTGCAAGGGCTTTGTTTCTG...TCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp CTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCAGGTATGAAAGGAAATACTaGCAGCGCTCACTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LFQHLAPQTDCEDGSSIRYERKY*QRSLPP
Trigger: AGGAGGGAGTGAGCGCTGGCAGTATTTCCTTTCATA...CCTGATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp GTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGTCGCCGGTGCCCCGGTaGACGACGGGAGACGCCCCA +
Preference number: 4 (lower is better)
Translates to: VLFKSNSPCVLCLTYKHLSPVPR*TTGDAP
Trigger: TGGGGCGTCTCCCGTCGTGCACCGGGGCACCGGCGA...CAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
CDS-3UTR GCA 90 bp GGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTTCGCCGGTGCCCCGGTaGACGACGGGAGACGCCCCA +
Preference number: 4 (lower is better)
Translates to: GSVQKQQPLCLMFNLQTSSPVPR*TTGDAP
Trigger: TGGGGCGTCTCCCGTCGTGCACCGGGGCACCGGCGA...AGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
CDS-3UTR CCA 90 bp ACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTGGCACTCGGCTCCTACCAGTCAGGCACCGAGAGCTaGCTTTGCAGGAATAGGTGC +
Preference number: 4 (lower is better)
Translates to: TNLRVEQCRMPVALGSYQSGTES*LCRNRC
Trigger: GCACCTATTCCTGCAAAGCCAGCTCTCGGTGCCTGA...CTGGTAGGAGCCGAGTGCCACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp CAGGCTTCTATCTCAGGCACCGAGAGCTGGCTTTGCAGGAATAGGTGCAACTGGATGGTACTTCGGCCCTaGACACAGGCTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: QASISGTESWLCRNRCNWMVLRP*TQASIS
Trigger: TGAGATAGAAGCCTGTGTCCAGGGCCGAAGTACCAT...CCAGTTGCACCTATTCCTGCAAAGCCAGCTCTCGGTGCCTGAGATAGAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR CCA 90 bp TTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTAACGGGTCCCCAAAACTaGTCACCTGAGGAGATACTC +
Preference number: 4 (lower is better)
Translates to: LPHTGPQNWSPEEILLVLTGPQN*SPEEIL
Trigger: GAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGT...TAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp AGGCTCCACTCAGCCAGGCTAAGGTCTCGGGACATAAATCCCCAGCAGCAGGAGAACTGTGAGAAGAGTTaGATCCCAGCTCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: RLHSARLRSRDINPQQQENCEKS*IPALWK
Trigger: CTTCCAAAGAGCTGGGATCCAACTCTTCTCACAGTT...CTCCTGCTGCTGGGGATTTATGTCCCGAGACCTTAGCCTGGCTGAGTGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp ACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGGGCCCGGGCTCTGAGTaGGATTCCCGCTTCCGAATA +
Preference number: 4 (lower is better)
Translates to: TNFISLSAPGTSDRLRGWGPGSE*DSRFRI
Trigger: TATTCGGAAGCGGGAATCCCACTCAGAGCCCGGGCC...CCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393405.6
CDS-3UTR TCA 90 bp CATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACATTGGAAGGAAACATCTaGGAACAGCACCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: HTGPQNWSPEEILLVLHTLEGNI*EQHQLP
Trigger: GGGGAGCTGGTGCTGTTCTCAGATGTTTCCTTCCAA...TGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000582104.5
CDS-3UTR TCA 90 bp GGGGCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGATCTCCTTTAGCCAGGTaGGAAGAGCTCTGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GAVMTDLCQSAQAEVTRRSPLAR*EELCLS
Trigger: AGAGAGGCAGAGCTCTTCTCACCTGGCTAAAGGAGA...TCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GCAACTGGCTGTCTGACAGGAGAACCACACTCTGCAGGACCTTTTCAAGGAAGTTCTCCTTTAGCCAGGTaGGAAGAGCTCTGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: ATGCLTGEPHSAGPFQGSSPLAR*EELCLS
Trigger: AGAGAGGCAGAGCTCTTCTCACCTGGCTAAAGGAGA...ACTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR TCA 90 bp ACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACGCCCTCCTCACAGACTaGAGAGTGGAGGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TGHLRRYSWSYIQMTCRNALLTD*RVEVPS
Trigger: AGAGGGAACCTCCACTCTTCAGTCTGTGAGGAGGGC...GTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp ACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACATCCAAAGGCACAGCATaGTCTCCTCCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TKCSRATAKTEASQDGDTSKGTA*SPPTAL
Trigger: GAGGGCTGTGGGAGGAGATCATGCTGTGCCTTTGGA...TGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp ACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGTCCAAAGGCACAGCATaGTCTCCTCCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TNFISLSAPGTSDRLRGWSKGTA*SPPTAL
Trigger: GAGGGCTGTGGGAGGAGATCATGCTGTGCCTTTGGA...CCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp CTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATTCCAAAGGCACAGCATaGTCTCCTCCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LPQTKCSRATAKTEASQDSKGTA*SPPTAL
Trigger: GAGGGCTGTGGGAGGAGATCATGCTGTGCCTTTGGA...ATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp GGGGCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGAAGGGGCTGTAATGACTaGCCTCTGTCAATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GAVMTDLCQSAQAEVTRRRGCND*PLSISP
Trigger: TGGGCTGATTGACAGAGGTCAGTCATTACAGCCCCT...TCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp ATATGGCAGCTTAGAATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGTCACGCCCAGAACTGTaGGAAGAGTTGGATCCCAGC +
Preference number: 4 (lower is better)
Translates to: IWQLRICHIRVPKTGHLRSRPEL*EELDPS
Trigger: GCTGGGATCCAACTCTTCTCACAGTTCTGGGCGTGA...CCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAATTCTAAGCTGCCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp GTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGGCTTCTCCTTCCGGGTaGGTCGCCGGTGCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: VLFKSNSPCVLCLTYKHLASPSG*VAGAPV
Trigger: CACCGGGGCACCGGCGACTCACCCGGAAGGAGAAGC...CAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
CDS-3UTR TCA 90 bp GCAACTGGCTGTCTGACAGGAGAACCACACTCTGCAGGACCTTTTCAAGGAAGTTGTACTGCCAACAAATaGTCCAGGCTGGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ATGCLTGEPHSAGPFQGSCTANK*SRLAPE
Trigger: CTCAGGAGCCAGCCTGGATCATTTGTTGGCAGTACA...ACTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581705.5
CDS-3UTR TCA 90 bp GCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAACATAACGCTTTGCTGTTGGTCTaGGAACAGCACCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: ALGLQQKLKPAKMGIQHNALLLV*EQHQLP
Trigger: GGGGAGCTGGTGCTGTTCTCAGACCAACAGCAAAGC...GTTATGTTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452859.6
CDS-3UTR GCA 90 bp CCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACCTTTTCAAGGAAGTaGTGCAGACCTTGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: PHTGPQNWSPEEILLVLHTFSRK*CRPCRR
Trigger: GCGACGACAAGGTCTGCAGCACTTCCTTGAAAAGGT...ATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp CAAGAGGCCAGCCTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAATCATCCCCCTGTCCATaGAAGGAGGTAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: QEASLPQTKCSRATAKTESSPCP*KEVGKR
Trigger: CCTCTTGCCTACCTCCTTGCATGGACAGGGGGATGA...TTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAGGCTGGCCTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR GCA 90 bp ATATGGCAGCTTAGAATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGGACCATGAGCTGTTGTaGAGGTCTCAGGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: IWQLRICHIRVPKTGHLRDHELL*RSQAPL
Trigger: GAGTGGAGCCTGAGACCTGCACAACAGCTCATGGTC...CCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAATTCTAAGCTGCCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp GGGGCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGAGTGGTGAACTTGAGCTaGACACACAATGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GAVMTDLCQSAQAEVTRRVVNLS*THNAGG
Trigger: CCCTCCTGCATTGTGTGTGCAGCTCAAGTTCACCAC...TCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp GGGGCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGAAGCTGGGTTCACAGCTaGACCATTTGGAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: GAVMTDLCQSAQAEVTRRSWVHS*TIWSIG
Trigger: CCCAATGCTCCAAATGGTGCAGCTGTGAACCCAGCT...TCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR GCA 90 bp CTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACTGGGACGCCGGAGAGTaGACGCAGGTGCCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LFKSNSPCVLCLTYKHLHWDAGE*TQVPGE
Trigger: CTCACCCGGCACCTGCGTGCACTCTCCGGCGTCCCA...GTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
CDS-3UTR GCA 90 bp ATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGCGGGTGAGTCGCCGGTaGCCCGGTGCACGACGGGAG +
Preference number: 4 (lower is better)
Translates to: MFNLQTSAQYLFPWKRHKRVSRR*PGARRE
Trigger: CTCCCGTCGTGCACCGGGGCACCGGCGACTCACCCG...CTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
CDS-3UTR GCA 90 bp GAGCCCTCTCTTTCAGGCAGGCAGAAACAAAGCCCTTGCACCCCACTGCACTGCTCAGCCAATATGTACTaGCAACAAATGATCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EPSLSGRQKQSPCTPLHCSANMY*QQMIQA
Trigger: AGCCTGGATCATTTGTTGGCAGTACATATTGGCTGA...GCAGTGCAGTGGGGTGCAAGGGCTTTGTTTCTGCCTGCCTGAAAGAGAGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393405.6
CDS-3UTR CCA 90 bp CTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGTCCTTTTCTTCACTaGGAGGCGGTGAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LPQTKCSRATAKTEASQDGPFLH*EAVRES
Trigger: GCTCTCCCTCACCGCCTCCCAGTGAAGAAAAGGACC...ATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp CAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGGGTCCTTTTCTTCACTaGGAGGCGGTGAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QNWSPEEILLVLHTNDLQGPFLH*EAVRES
Trigger: GCTCTCCCTCACCGCCTCCCAGTGAAGAAAAGGACC...CTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCAGGCTGAGGAGATACTCCTaGTCCTACATACAAATGACC +
Preference number: 4 (lower is better)
Translates to: LFQHLAPQTDCEDGSSIRLRRYS*SYIQMT
Trigger: GGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAG...CCTGATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp CATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAACGGGTCCCCAAAACTaGTCACCTGAGGAGATACTC +
Preference number: 4 (lower is better)
Translates to: HTGPQNWSPEEILLVLHTTGPQN*SPEEIL
Trigger: GAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGT...TGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CAGCCAGGGCTTTGCATCTGCCTGTTGACAAACTTTATTTCTCTTTCAGCACCTTGCACTCGGGGGTCCTaGACACGCACTGTAATCACC +
Preference number: 4 (lower is better)
Translates to: QPGLCICLLTNFISLSAPCTRGS*TRTVIT
Trigger: GGTGATTACAGTGCGTGTTCAGGACCCCCGAGTGCA...AGGTGCTGAAAGAGAAATAAAGTTTGTCAACAGGCAGATGCAAAGCCCTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR TCA 90 bp GACAATCCTTCCTCCAGTGGTGAACTTGAGCTGCACACACAATGCAGGAGGGCTGGCCCAGCCACAGTTTaGCATAGCATATCGAAGAAT +
Preference number: 4 (lower is better)
Translates to: DNPSSSGELELHTQCRRAGPATV*HSISKN
Trigger: ATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCC...AGCCCTCCTGCATTGTGTGTGCAGCTCAAGTTCACCACTGGAGGAAGGATTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp AGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTCCAAAGGCACAGCATaGTCTCCTCCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSQESNIGFCSKATAPVSSKGTA*SPPTAL
Trigger: GAGGGCTGTGGGAGGAGATCATGCTGTGCCTTTGGA...AGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp AGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTGGCCCGCATCTTCTCTaGCCATCTCAGAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: RSQESNIGFCSKATAPVSGPHLL*PSQSRT
Trigger: GGTTCTGCTCTGAGATGGTCAGAGAAGATGCGGGCC...AGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp AAGGTTCACGCCCAGAACTGTGAGAAGAGTTGGATCCCAGCTCTTTGGAAGACACAGCCCAAGCAGAGGTaGCTAGAAGACACTAAGCAG +
Preference number: 4 (lower is better)
Translates to: KVHAQNCEKSWIPALWKTQPKQR*LEDTKQ
Trigger: CTGCTTAGTGTCTTCTAGTCACCTCTGCTTGGGCTG...TGTCTTCCAAAGAGCTGGGATCCAACTCTTCTCACAGTTCTGGGCGTGAACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp GGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAACATAACCACTCCCAGCCCAAGCAGAGGTaGCTAGAAGACACTAAGCAG +
Preference number: 4 (lower is better)
Translates to: GLQQKLKPAKMGIQHNHSQPKQR*LEDTKQ
Trigger: CTGCTTAGTGTCTTCTAGTCACCTCTGCTTGGGCTG...GGAGTGGTTATGTTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp CCCCTCCACTCTGAACTAAATGCCATGACAGTCCCACAGCATAGGCTGGTAGTACCACTCCCAGTGGGATaGTGTTCAATATGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PLHSELNAMTVPQHRLVVPLPVG*CSIWQL
Trigger: AAGCTGCCATATTGAACATCATCCCACTGGGAGTGG...TACTACCAGCCTATGCTGTGGGACTGTCATGGCATTTAGTTCAGAGTGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp TTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCGAATGCCTCATTGTCTaGAGGAGAGCGTGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: FLFQHLAPQTDCEDGSSIECLIV*RRACCF
Trigger: GAAACAACACGCTCTCCTTCAGACAATGAGGCATTC...GATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp TTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCAGGTAAAGAATGCCTCATTGTCTaGAGGAGAGCGTGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: FSTWHLRQTARMEAASGKECLIV*RRACCF
Trigger: GAAACAACACGCTCTCCTTCAGACAATGAGGCATTC...TTTACCTGATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp ATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCAAAGCCCCTCCACTCTaGACTAAATGCCATGACAGT +
Preference number: 4 (lower is better)
Translates to: ICHIRVPKTGHLRRYSWSKAPPL*TKCHDS
Trigger: ACTGTCATGGCATTTAGTTCAGAGTGGAGGGGCTTT...GGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp GAGGGGAAGGATCACACACACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTTCACGCCCAGAACTGTaGGAAGAGTTGGATCCCAGC +
Preference number: 4 (lower is better)
Translates to: EGKDHTHKPKSRAMQNACSRPEL*EELDPS
Trigger: GCTGGGATCCAACTCTTCTCACAGTTCTGGGCGTGA...ACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGTGTGTGTGATCCTTCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp CCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATTCTGTCGGGTTTTTGTaGGGGTTGCACATGGAGTTT +
Preference number: 4 (lower is better)
Translates to: PHTGPQNWSPEEILLVLHSVGFL*GLHMEF
Trigger: AAACTCCATGTGCAACCCTCACAAAAACCCGACAGA...ATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR GCA 90 bp TTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTATTTTCAAGGAAGTGCTaGAGACCTTGTCGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: LPHTGPQNWSPEEILLVLFSRKC*RPCRRF
Trigger: GAAGCGACGACAAGGTCTGCAGCACTTCCTTGAAAA...TAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp GGGGCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGAACCTTTTCAAGGAAGTaGTGCAGACCTTGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: GAVMTDLCQSAQAEVTRRTFSRK*CRPCRR
Trigger: GCGACGACAAGGTCTGCAGCACTTCCTTGAAAAGGT...TCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp GGAATAGGTGCAACTGGCTGTCTGACAGGAGAACCACACTCTGCAGGACCTTTTCTTTGCAGGAATAGGTaGAACTGGCTGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: GIGATGCLTGEPHSAGPFLCRNR*NWLSDR
Trigger: CCTGTCAGACAGCCAGTTGCACCTATTCCTGCAAAG...AAAAGGTCCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR GCA 90 bp AAGTGCTGCAGACCTTGTCGTCGCTTCTCAATGAACTCATCTGAGGTGCCGAAGCTTTGCAGGAATAGGTaGAACTGGCTGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: KCCRPCRRFSMNSSEVPKLCRNR*NWLSDR
Trigger: CCTGTCAGACAGCCAGTTGCACCTATTCCTGCAAAG...CTTCGGCACCTCAGATGAGTTCATTGAGAAGCGACGACAAGGTCTGCAGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR GCA 90 bp GCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGACACACCGAGAGCTGGCTTTaGAGGAATAGGTGCAACTGG +
Preference number: 4 (lower is better)
Translates to: AVMTDLCQSAQAEVTRRHTESWL*RNRCNW
Trigger: CCAGTTGCACCTATTCCTGCAAAGCCAGCTCTCGGT...GTGTCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp CTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCAGGTACATACAAATGACCTaGAGAAACTCAGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: LFQHLAPQTDCEDGSSIRYIQMT*RNSDPR
Trigger: CCTGGGATCTGAGTTTCTGCAGGTCATTTGTATGTA...CCTGATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp CAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGTCATCCCCCTGTCCATaGAAGGAGGTAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: QNWSPEEILLVLHTNDLQSSPCP*KEVGKR
Trigger: CCTCTTGCCTACCTCCTTGCATGGACAGGGGGATGA...CTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR GCA 90 bp ACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACACAGAAACAAAGCCCTTaGACCCCACTGCACTGCGCA +
Preference number: 4 (lower is better)
Translates to: TKCSRATAKTEASQDGDTQKQSP*TPLHCA
Trigger: TGCGCAGTGCAGTGGGGTGCAAGGGCTTTGTTTCTG...TGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp CAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGGAGCTGCACACACAATaGAGGAGGGCTACAGAGCAC +
Preference number: 4 (lower is better)
Translates to: QNWSPEEILLVLHTNDLQELHTQ*RRATEH
Trigger: GTGCTCTGTAGCCCTCCTGCATTGTGTGTGCAGCTC...CTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp ACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGTCTTTGAATGGCTCCTaGTGTCCCAGCAGCCTAGCC +
Preference number: 4 (lower is better)
Translates to: TNFISLSAPGTSDRLRGWSLNGS*CPSSLA
Trigger: GGCTAGGCTGCTGGGACAGCAGGAGCCATTCAAAGA...CCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR GCA 90 bp TTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATATCGCCGGTGCCCCGGTaGACGACGGGAGACGCCCCA +
Preference number: 4 (lower is better)
Translates to: LCLTYKHLHSICSHGRGISPVPR*TTGDAP
Trigger: TGGGGCGTCTCCCGTCGTGCACCGGGGCACCGGCGA...TATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
CDS-3UTR CCA 90 bp GGGGCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGAAGGAATAGGTGCAACTaGCTGTCTGACAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: GAVMTDLCQSAQAEVTRRRNRCN*LSDRRT
Trigger: GGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCCT...TCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp GAAAGTAAATATTCATCCCCCTGTCCATGCAAGGAGGTAGGCAAGAGGCCAGCCATGGTACTTCGGCCCTaGACACAGGCTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: ESKYSSPCPCKEVGKRPAMVLRP*TQASIS
Trigger: TGAGATAGAAGCCTGTGTCCAGGGCCGAAGTACCAT...GGCTGGCCTCTTGCCTACCTCCTTGCATGGACAGGGGGATGAATATTTACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp GGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCATCAGACACAGTCATaGTACTTCGGCCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: GPQNWSPEEILLVLHTNDHQTQS*YFGPGH
Trigger: GTGTCCAGGGCCGAAGTACCATGACTGTGTCTGATG...GTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CTCTCTTCCTGGGCCCAGCCACAGTTTGACATAGCATATCGAAGAATGGCATCACATCAGACACAGTCATaGTACTTCGGCCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: LSSWAQPQFDIAYRRMASHQTQS*YFGPGH
Trigger: GTGTCCAGGGCCGAAGTACCATGACTGTGTCTGATG...TGATGCCATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCCCAGGAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR CCA 90 bp CAGGCTTCTATCTCAGGCACCGAGAGCTGGCTTTGCAGGAATAGGTGCAACTGGGCCCACACTTCTAAATaGTCCTTTTCTTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: QASISGTESWLCRNRCNWAHTSK*SFSSLG
Trigger: TCCCAGTGAAGAAAAGGACCATTTAGAAGTGTGGGC...CCAGTTGCACCTATTCCTGCAAAGCCAGCTCTCGGTGCCTGAGATAGAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581705.5
CDS-3UTR CCA 90 bp TTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCATGGAGGTTCCCTCTTTaGGTCTTCCAAAATCACAGC +
Preference number: 4 (lower is better)
Translates to: FSFSTWHLRQTARMEAASWRFPL*VFQNHS
Trigger: GCTGTGATTTTGGAAGACCCAAAGAGGGAACCTCCA...TGATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp ATATGGCAGCTTAGAATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGTGTTACTGTTCCCTCTaGCTGTGGCCAGCCACTTCT +
Preference number: 4 (lower is better)
Translates to: IWQLRICHIRVPKTGHLRCYCSL*LWPATS
Trigger: AGAAGTGGCTGGCCACAGCCAGAGGGAACAGTAACA...CCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAATTCTAAGCTGCCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp CACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGTGTTACTGTTCCCTCTaGCTGTGGCCAGCCACTTCT +
Preference number: 4 (lower is better)
Translates to: HKQSALGLQQKLKPAKMGCYCSL*LWPATS
Trigger: AGAAGTGGCTGGCCACAGCCAGAGGGAACAGTAACA...CCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp GACAATCCTTCCTCCAGTGGTGAACTTGAGCTGCACACACAATGCAGGAGGGCTCAAAATAAAGGCCCCTaGGCTGTTACTGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: DNPSSSGELELHTQCRRAQNKGP*AVTVPS
Trigger: AGAGGGAACAGTAACAGCCCAGGGGCCTTTATTTTG...AGCCCTCCTGCATTGTGTGTGCAGCTCAAGTTCACCACTGGAGGAAGGATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp ACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGGGCTCCTACCAGCTCTaGCTCTCAGTGGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: TNFISLSAPGTSDRLRGWGSYQL*LSVEMK
Trigger: CTTCATCTCCACTGAGAGCCAGAGCTGGTAGGAGCC...CCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp CTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATAATGCAGAATGCCTGTaGCACTCGGCTCCTACCAGC +
Preference number: 4 (lower is better)
Translates to: LPQTKCSRATAKTEASQDNAECL*HSAPTS
Trigger: GCTGGTAGGAGCCGAGTGCCACAGGCATTCTGCATT...ATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp ATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCGACAGACTGCGAGGATaGAAGCAGCATCAGGTAAAT +
Preference number: 4 (lower is better)
Translates to: ICHIRVPKTGHLRRYSWSDRLRG*KQHQVN
Trigger: ATTTACCTGATGCTGCTTCCATCCTCGCAGTCTGTC...GGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
3UTR CAA 72 bp GGCACAGCTGGGTTCACAGCTGCACCATTTGGAGCATaGGGCTCATTAATATTCATGAGCCATCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: GTAGFTAAPFGA*GSLIFMSHPHQ
Trigger: TTGGTGGGGATGGCTCATGAATATTAATGAGCCCAATGCTCCAAATGGTGCAGCTGTGAACCCAGCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR TCA 90 bp ACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACATTGGAAGGAAACATCTaGGAACAGCACCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TKCSRATAKTEASQDGDTLEGNI*EQHQLP
Trigger: GGGGAGCTGGTGCTGTTCTCAGATGTTTCCTTCCAA...TGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR TCA 90 bp AGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTGGTGCCGAAGAAGGTTaGCTTCCCAGGAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RSQESNIGFCSKATAPVSGAEEG*LPRKFR
Trigger: CCTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACC...AGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp AAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAACAGTCGTCGCTTCTCAATaGACTCATCTGAGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: KCSRATAKTEASQDGDTTVVASQ*THLRCR
Trigger: TCGGCACCTCAGATGAGTTCATTGAGAAGCGACGAC...TGTTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp AACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAAGTGCAACTGGCTGTCTaGCAGGAGAACCACACTCTG +
Preference number: 4 (lower is better)
Translates to: NWSPEEILLVLHTNDLQKVQLAV*QENHTL
Trigger: CAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCAC...TTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GGGGCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGAGGCCCAGCCACAGTTTaGCATAGCATATCGAAGAAT +
Preference number: 4 (lower is better)
Translates to: GAVMTDLCQSAQAEVTRRGPATV*HSISKN
Trigger: ATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCC...TCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GGAATAGGTGCAACTGGCTGTCTGACAGGAGAACCACACTCTGCAGGACCTTTTGGCCCAGCCACAGTTTaGCATAGCATATCGAAGAAT +
Preference number: 4 (lower is better)
Translates to: GIGATGCLTGEPHSAGPFGPATV*HSISKN
Trigger: ATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCC...AAAAGGTCCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR TCA 90 bp CTCAGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTCCTTTAGCCAGGTaGGAAGAGCTCTGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LRSQESNIGFCSKATAPVSPLAR*EELCLS
Trigger: AGAGAGGCAGAGCTCTTCTCACCTGGCTAAAGGAGA...CACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp ACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGGCTGTTCCAAAGGCACAGCATaGTCTCCTCCCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TYKHLHSICSHGRGIRGCSKGTA*SPPTAL
Trigger: GAGGGCTGTGGGAGGAGATCATGCTGTGCCTTTGGA...ACAGCCCCTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp ACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGGCTGTGGCCCGCATCTTCTCTaGCCATCTCAGAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: TYKHLHSICSHGRGIRGCGPHLL*PSQSRT
Trigger: GGTTCTGCTCTGAGATGGTCAGAGAAGATGCGGGCC...ACAGCCCCTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GAAGAGTTGGATCCCAGCTCTTTGGAAGACAATCCTTCCTCCAGTGGTGAACTTCAGCCCAAGCAGAGGTaGCTAGAAGACACTAAGCAG +
Preference number: 4 (lower is better)
Translates to: EELDPSSLEDNPSSSGELQPKQR*LEDTKQ
Trigger: CTGCTTAGTGTCTTCTAGTCACCTCTGCTTGGGCTG...AAGTTCACCACTGGAGGAAGGATTGTCTTCCAAAGAGCTGGGATCCAACTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp GACCTTTTCAAGGAAGTGCTGCAGACCTTGTCGTCGCTTCTCAATGAACTCATCCAGCCCAAGCAGAGGTaGCTAGAAGACACTAAGCAG +
Preference number: 4 (lower is better)
Translates to: DLFKEVLQTLSSLLNELIQPKQR*LEDTKQ
Trigger: CTGCTTAGTGTCTTCTAGTCACCTCTGCTTGGGCTG...GATGAGTTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTCCTTGAAAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581705.5
CDS-3UTR TCA 90 bp CCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATGGTCCTACATACAAATaGCCTGCAGAAACTCAGATC +
Preference number: 4 (lower is better)
Translates to: PHTGPQNWSPEEILLVLHGPTYK*PAETQI
Trigger: GATCTGAGTTTCTGCAGGTCATTTGTATGTAGGACC...ATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp AAGGATCACACACACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTGGCACTGGCAGAACTAGCTGCTaGGCACCAACTCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KDHTHKPKSRAMQNACGTGRTSC*APTPGR
Trigger: TCTTCCTGGAGTTGGTGCTCAGCAGCTAGTTCTGCC...AGTGCCACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGTGTGTGTGATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR GCA 90 bp AAGTGCTGCAGACCTTGTCGTCGCTTCTCAATGAACTCATCTGAGGTGCCGAAGTTTTCAAGGAAGTGCTaGAGACCTTGTCGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: KCCRPCRRFSMNSSEVPKFSRKC*RPCRRF
Trigger: GAAGCGACGACAAGGTCTGCAGCACTTCCTTGAAAA...CTTCGGCACCTCAGATGAGTTCATTGAGAAGCGACGACAAGGTCTGCAGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR GCA 90 bp CCCCTCCACTCTGAACTAAATGCCATGACAGTCCCACAGCATAGGCTGGTAGTAAGGAGAACCACACTCTaGAGGACCTTTTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PLHSELNAMTVPQHRLVVRRTTL*RTFSRK
Trigger: CTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCT...TACTACCAGCCTATGCTGTGGGACTGTCATGGCATTTAGTTCAGAGTGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp GGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTTTGCAGGAATAGGTaGAACTGGCTGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: GPQNWSPEEILLVLHTNDLCRNR*NWLSDR
Trigger: CCTGTCAGACAGCCAGTTGCACCTATTCCTGCAAAG...GTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp CTCAGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGACCGAGAGCTGGCTTTaGAGGAATAGGTGCAACTGG +
Preference number: 4 (lower is better)
Translates to: LRSQESNIGFCSKATAPVTESWL*RNRCNW
Trigger: CCAGTTGCACCTATTCCTGCAAAGCCAGCTCTCGGT...CACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp ACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACACCGAGAGCTGGCTTTaGAGGAATAGGTGCAACTGG +
Preference number: 4 (lower is better)
Translates to: TGHLRRYSWSYIQMTCRNTESWL*RNRCNW
Trigger: CCAGTTGCACCTATTCCTGCAAAGCCAGCTCTCGGT...GTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp CTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGTGGTGAACTTGAGCTaGACACACAATGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPQTKCSRATAKTEASQDVVNLS*THNAGG
Trigger: CCCTCCTGCATTGTGTGTGCAGCTCAAGTTCACCAC...ATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCGAGAGTGCACGCAGGTaGCGGGTGAGGGACGGCGAA +
Preference number: 4 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFESARR*RVRDGE
Trigger: TTCGCCGTCCCTCACCCGGCACCTGCGTGCACTCTC...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452859.6
ENST00000580219.5
CDS-3UTR CCA 90 bp GGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACACCTCCTCCTGTTCTTaGTTCTCCGACATCCTACAC +
Preference number: 4 (lower is better)
Translates to: GPQNWSPEEILLVLHTNDTSSCS*FSDILH
Trigger: GTGTAGGATGTCGGAGAACCAAGAACAGGAGGAGGT...GTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000581705.5
CDS-3UTR CCA 90 bp CTCTCTTCCTGGGCCCAGCCACAGTTTGACATAGCATATCGAAGAATGGCATCAAGGAATAGGTGCAACTaGCTGTCTGACAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: LSSWAQPQFDIAYRRMASRNRCN*LSDRRT
Trigger: GGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCCT...TGATGCCATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCCCAGGAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR CCA 90 bp AAGGATCACACACACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTGGCACTTCAGGCACCGAGAGCTaGCTTTGCAGGAATAGGTGC +
Preference number: 4 (lower is better)
Translates to: KDHTHKPKSRAMQNACGTSGTES*LCRNRC
Trigger: GCACCTATTCCTGCAAAGCCAGCTCTCGGTGCCTGA...AGTGCCACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGTGTGTGTGATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp AGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTCAGGCACCGAGAGCTaGCTTTGCAGGAATAGGTGC +
Preference number: 4 (lower is better)
Translates to: RSQESNIGFCSKATAPVSSGTES*LCRNRC
Trigger: GCACCTATTCCTGCAAAGCCAGCTCTCGGTGCCTGA...AGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp TCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACTCAGATCAGGCACCGAGAGCTaGCTTTGCAGGAATAGGTGC +
Preference number: 4 (lower is better)
Translates to: SPEEILLVLHTNDLQKLRSGTES*LCRNRC
Trigger: GCACCTATTCCTGCAAAGCCAGCTCTCGGTGCCTGA...TCTGAGTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp GGGGCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGATGGAGGTTCCCTCTTTaGGTCTTCCAAAATCACAGC +
Preference number: 4 (lower is better)
Translates to: GAVMTDLCQSAQAEVTRRWRFPL*VFQNHS
Trigger: GCTGTGATTTTGGAAGACCCAAAGAGGGAACCTCCA...TCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp GGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACTCACAGACTGAAGAGTaGAGGTTCCCTCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: GPQNWSPEEILLVLHTNDSQTEE*RFPLWV
Trigger: GACCCAAAGAGGGAACCTCCACTCTTCAGTCTGTGA...GTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp GCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGACACTCACAGACTGAAGAGTaGAGGTTCCCTCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: AVMTDLCQSAQAEVTRRHSQTEE*RFPLWV
Trigger: GACCCAAAGAGGGAACCTCCACTCTTCAGTCTGTGA...GTGTCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATCTGAGGAGATACTCCTaGTCCTACATACAAATGACC +
Preference number: 4 (lower is better)
Translates to: PHTGPQNWSPEEILLVLHLRRYS*SYIQMT
Trigger: GGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAG...ATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp GTTGACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGACGGGTCCCCAAAACTaGTCACCTGAGGAGATACTC +
Preference number: 4 (lower is better)
Translates to: VDKLYFSFSTWHLRQTARTGPQN*SPEEIL
Trigger: GAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGT...CCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp CAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAAACGGGTCCCCAAAACTaGTCACCTGAGGAGATACTC +
Preference number: 4 (lower is better)
Translates to: QSALGLQQKLKPAKMGIQTGPQN*SPEEIL
Trigger: GAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGT...TTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp AAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAACAAGCTTCAGGCACAGCTaGGTTCACAGCTGCACCATT +
Preference number: 4 (lower is better)
Translates to: KCSRATAKTEASQDGDTTSFRHS*VHSCTI
Trigger: AATGGTGCAGCTGTGAACCCAGCTGTGCCTGAAGCT...TGTTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR CCA 90 bp CAAGAGGCCAGCCTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAACCTCCAGCTCCTGTCTaGAAGTTTCGAGATCAGAGA +
Preference number: 4 (lower is better)
Translates to: QEASLPQTKCSRATAKTEPPAPV*KFRDQR
Trigger: TCTCTGATCTCGAAACTTCCAGACAGGAGCTGGAGG...TTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAGGCTGGCCTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR CCA 90 bp GGCTCATTAATATTCATGAGCCATCCCCACCAATCGGCAGAGCGGATGCCATTAATCCATGTCTTTGAATaGCTCCTGCTGTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSLIFMSHPHQSAERMPLIHVFE*LLLSQQ
Trigger: CTGCTGGGACAGCAGGAGCCATTCAAAGACATGGAT...TAATGGCATCCGCTCTGCCGATTGGTGGGGATGGCTCATGAATATTAATGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR CCA 90 bp GCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGACACACAAATGATCCAGGCTaGCTCCTGAGAACAGCACCA +
Preference number: 4 (lower is better)
Translates to: AVMTDLCQSAQAEVTRRHTNDPG*LLRTAP
Trigger: TGGTGCTGTTCTCAGGAGCCAGCCTGGATCATTTGT...GTGTCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393405.6
ENST00000581705.5
CDS-3UTR CCA 90 bp CATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACACTTACCTCCTGTTCTTaGTTCTCCGACATCCTACAC +
Preference number: 4 (lower is better)
Translates to: HTGPQNWSPEEILLVLHTLTSCS*FSDILH
Trigger: GTGTAGGATGTCGGAGAACCAAGAACAGGAGGTAAG...TGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582104.5
CDS-3UTR TCA 90 bp AGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTGTCGTCGCTTCTCAATaGACTCATCTGAGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: RSQESNIGFCSKATAPVSVVASQ*THLRCR
Trigger: TCGGCACCTCAGATGAGTTCATTGAGAAGCGACGAC...AGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp TTGGAAGACAATCCTTCCTCCAGTGGTGAACTTGAGCTGCACACACAATGCAGGGGCCCAGCCACAGTTTaGCATAGCATATCGAAGAAT +
Preference number: 4 (lower is better)
Translates to: LEDNPSSSGELELHTQCRGPATV*HSISKN
Trigger: ATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCC...CCTGCATTGTGTGTGCAGCTCAAGTTCACCACTGGAGGAAGGATTGTCTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp TCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACTCAGATCTCCTTTAGCCAGGTaGGAAGAGCTCTGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SPEEILLVLHTNDLQKLRSPLAR*EELCLS
Trigger: AGAGAGGCAGAGCTCTTCTCACCTGGCTAAAGGAGA...TCTGAGTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGATTCACTGGGAGGCGGTaGGGGAGAGCTCCTCCTACC +
Preference number: 4 (lower is better)
Translates to: PCVLCLTYKHLHSICSHGFTGRR*GRAPPT
Trigger: GGTAGGAGGAGCTCTCCCTCACCGCCTCCCAGTGAA...TCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GTAGGCAAGAGGCCAGCCTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAAAAAACTGTTTCTAACTaGCCAGGGTCCAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: VGKRPASHKQSALGLQQKKTVSN*PGSKGT
Trigger: TGTGCCTTTGGACCCTGGTCAGTTAGAAACAGTTTT...TTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAGGCTGGCCTCTTGCCTAC
49% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp AGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTCAGCCCAAGCAGAGGTaGCTAGAAGACACTAAGCAG +
Preference number: 4 (lower is better)
Translates to: RSQESNIGFCSKATAPVSQPKQR*LEDTKQ
Trigger: CTGCTTAGTGTCTTCTAGTCACCTCTGCTTGGGCTG...AGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GGGGCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGAGGTCCTACATACAAATaGCCTGCAGAAACTCAGATC +
Preference number: 4 (lower is better)
Translates to: GAVMTDLCQSAQAEVTRRGPTYK*PAETQI
Trigger: GATCTGAGTTTCTGCAGGTCATTTGTATGTAGGACC...TCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACTCAGATCCAAAACTGGTCACCTaGGGAGATACTCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: HLRRYSWSYIQMTCRNSDPKLVT*GDTPGP
Trigger: AGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGG...ATCTGAGTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp TCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACTCAGACCAAAACTGGTCACCTaGGGAGATACTCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SPEEILLVLHTNDLQKLRPKLVT*GDTPGP
Trigger: AGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGG...TCTGAGTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp ACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACACCACTCCCAGTGGGATaGTGTTCAATATGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TKCSRATAKTEASQDGDTPLPVG*CSIWQL
Trigger: AAGCTGCCATATTGAACATCATCCCACTGGGAGTGG...TGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp ATATGGCAGCTTAGAATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAAAGCCCCTCCACTCTaGACTAAATGCCATGACAGT +
Preference number: 4 (lower is better)
Translates to: IWQLRICHIRVPKTGHLRKAPPL*TKCHDS
Trigger: ACTGTCATGGCATTTAGTTCAGAGTGGAGGGGCTTT...CCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAATTCTAAGCTGCCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp ATATGGCAGCTTAGAATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGTTTTCAAGGAAGTGCTaGAGACCTTGTCGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: IWQLRICHIRVPKTGHLRFSRKC*RPCRRF
Trigger: GAAGCGACGACAAGGTCTGCAGCACTTCCTTGAAAA...CCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAATTCTAAGCTGCCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp GACCTTTTCAAGGAAGTGCTGCAGACCTTGTCGTCGCTTCTCAATGAACTCATCACCTTTTCAAGGAAGTaGTGCAGACCTTGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: DLFKEVLQTLSSLLNELITFSRK*CRPCRR
Trigger: GCGACGACAAGGTCTGCAGCACTTCCTTGAAAAGGT...GATGAGTTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTCCTTGAAAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR GCA 90 bp TTGGAAGACAATCCTTCCTCCAGTGGTGAACTTGAGCTGCACACACAATGCAGGAGGAGAACCACACTCTaGAGGACCTTTTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LEDNPSSSGELELHTQCRRRTTL*RTFSRK
Trigger: CTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCT...CCTGCATTGTGTGTGCAGCTCAAGTTCACCACTGGAGGAAGGATTGTCTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp ACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACACTTTGCAGGAATAGGTaGAACTGGCTGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: TKCSRATAKTEASQDGDTLCRNR*NWLSDR
Trigger: CCTGTCAGACAGCCAGTTGCACCTATTCCTGCAAAG...TGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR GCA 90 bp CCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGTGGCAGCTTAGAATTTaGCACATACGGGTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PQNWSPEEILLVLHTNDLWQLRI*HIRVPK
Trigger: TTTGGGGACCCGTATGTGGCAAATTCTAAGCTGCCA...CAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp ACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGGCTGTGACCATGAGCTGTTGTaGAGGTCTCAGGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: TYKHLHSICSHGRGIRGCDHELL*RSQAPL
Trigger: GAGTGGAGCCTGAGACCTGCACAACAGCTCATGGTC...ACAGCCCCTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp TTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTATCAGCCAATATGTACTaGCAACAAATGATCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LPHTGPQNWSPEEILLVLSANMY*QQMIQA
Trigger: AGCCTGGATCATTTGTTGGCAGTACATATTGGCTGA...TAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393405.6
ENST00000581705.5
CDS-3UTR GCA 90 bp CTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATGAGAGTGCACGCAGGTaGCGGGTGAGGGACGGCGAA +
Preference number: 4 (lower is better)
Translates to: LMFNLQTSAQYLFPWKRHESARR*RVRDGE
Trigger: TTCGCCGTCCCTCACCCGGCACCTGCGTGCACTCTC...ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452859.6
ENST00000580219.5
CDS-3UTR CCA 90 bp GCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAACATAACAGGAATAGGTGCAACTaGCTGTCTGACAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: ALGLQQKLKPAKMGIQHNRNRCN*LSDRRT
Trigger: GGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCCT...GTTATGTTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp GCCCAGCCACAGTTTGACATAGCATATCGAAGAATGGCATCAGACACAGTCATGAGGAATAGGTGCAACTaGCTGTCTGACAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: AQPQFDIAYRRMASDTVMRNRCN*LSDRRT
Trigger: GGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCCT...CATGACTGTGTCTGATGCCATTCTTCGATATGCTATGTCAAACTGTGGCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR CCA 90 bp AAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAACAATGGTACTTCGGCCCTaGACACAGGCTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: KCSRATAKTEASQDGDTTMVLRP*TQASIS
Trigger: TGAGATAGAAGCCTGTGTCCAGGGCCGAAGTACCAT...TGTTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp AAGGTTCACGCCCAGAACTGTGAGAAGAGTTGGATCCCAGCTCTTTGGAAGACACCTCCTACCCGATCTTaGAAGAAAGCAGCAACTCTT +
Preference number: 4 (lower is better)
Translates to: KVHAQNCEKSWIPALWKTPPTRS*KKAATL
Trigger: AAGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGG...TGTCTTCCAAAGAGCTGGGATCCAACTCTTCTCACAGTTCTGGGCGTGAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp CACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGCCTCCTACCCGATCTTaGAAGAAAGCAGCAACTCTT +
Preference number: 4 (lower is better)
Translates to: HKQSALGLQQKLKPAKMGPPTRS*KKAATL
Trigger: AAGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGG...CCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp AATAGGTGCAACTGGCTGTCTGACAGGAGAACCACACTCTGCAGGACCTTTTCACCTCCTACCCGATCTTaGAAGAAAGCAGCAACTCTT +
Preference number: 4 (lower is better)
Translates to: NRCNWLSDRRTTLCRTFSPPTRS*KKAATL
Trigger: AAGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGG...TGAAAAGGTCCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCACCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR CCA 90 bp CCTTGTCGTCGCTTCTCAATGAACTCATCTGAGGTGCCGAAGAAGGTTGACTTCCAGTATTTGTTCCCATaGAAGAGGCATAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PCRRFSMNSSEVPKKVDFQYLFP*KRHKGL
Trigger: CAGCCCCTTATGCCTCTTCCATGGGAACAAATACTG...GAAGTCAACCTTCTTCGGCACCTCAGATGAGTTCATTGAGAAGCGACGACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581705.5
CDS-3UTR CCA 90 bp CCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGTATTTGTTCCCATaGAAGAGGCATAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PQNWSPEEILLVLHTNDLQYLFP*KRHKGL
Trigger: CAGCCCCTTATGCCTCTTCCATGGGAACAAATACTG...CAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CCCCTCCACTCTGAACTAAATGCCATGACAGTCCCACAGCATAGGCTGGTAGTAACCCTGCGGAAAAGATaGCCACATGTCTGCTTTATA +
Preference number: 4 (lower is better)
Translates to: PLHSELNAMTVPQHRLVVTLRKR*PHVCFI
Trigger: TATAAAGCAGACATGTGGCCATCTTTTCCGCAGGGT...TACTACCAGCCTATGCTGTGGGACTGTCATGGCATTTAGTTCAGAGTGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp GGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTACACAGCAGAGACGCTaGTGGCGGAAGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSVQKQQPLCLMFNLQTSTQQRR*WRKPWR
Trigger: CCTCCAGGGCTTCCGCCACCAGCGTCTCTGCTGTGT...AGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp ACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGGCTGTGGCTCCTACCAGCTCTaGCTCTCAGTGGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: TYKHLHSICSHGRGIRGCGSYQL*LSVEMK
Trigger: CTTCATCTCCACTGAGAGCCAGAGCTGGTAGGAGCC...ACAGCCCCTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp TTGGAAGACAATCCTTCCTCCAGTGGTGAACTTGAGCTGCACACACAATGCAGGTGGATCCCAGCTCTTTaGAAGACAATCCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LEDNPSSSGELELHTQCRWIPAL*KTILPP
Trigger: TGGAGGAAGGATTGTCTTCCAAAGAGCTGGGATCCA...CCTGCATTGTGTGTGCAGCTCAAGTTCACCACTGGAGGAAGGATTGTCTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp AAGGTTCACGCCCAGAACTGTGAGAAGAGTTGGATCCCAGCTCTTTGGAAGACAGACAGACTGCGAGGATaGAAGCAGCATCAGGTAAAT +
Preference number: 4 (lower is better)
Translates to: KVHAQNCEKSWIPALWKTDRLRG*KQHQVN
Trigger: ATTTACCTGATGCTGCTTCCATCCTCGCAGTCTGTC...TGTCTTCCAAAGAGCTGGGATCCAACTCTTCTCACAGTTCTGGGCGTGAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp TTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAATAGCGCGGCTCCGCTaGCCAAGGCCCCGGACTGGA +
Preference number: 4 (lower is better)
Translates to: LCLTYKHLHSICSHGRGIIARLR*PRPRTG
Trigger: TCCAGTCCGGGGCCTTGGCCAGCGGAGCCGCGCTAT...TATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
CDS-3UTR CCA 90 bp TGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAATAGCGCGGCTCCGCTaGCCAAGGCCCCGGACTGGA +
Preference number: 4 (lower is better)
Translates to: CVLCLTYKHLHSICSHGRIARLR*PRPRTG
Trigger: TCCAGTCCGGGGCCTTGGCCAGCGGAGCCGCGCTAT...TCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
CDS-3UTR CCA 90 bp ACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACACAAATGATCCAGGCTaGCTCCTGAGAACAGCACCA +
Preference number: 4 (lower is better)
Translates to: TGHLRRYSWSYIQMTCRNTNDPG*LLRTAP
Trigger: TGGTGCTGTTCTCAGGAGCCAGCCTGGATCATTTGT...GTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393405.6
ENST00000581705.5
CDS-3UTR CCA 90 bp AGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTTGGAAGGAAACATTTaGGACGCCGGAGAGTGCACG +
Preference number: 4 (lower is better)
Translates to: RSQESNIGFCSKATAPVSLEGNI*DAGECT
Trigger: CGTGCACTCTCCGGCGTCCCAAATGTTTCCTTCCAA...AGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580219.5
CDS-3UTR TCA 90 bp CAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTGGTGCCGAAGAAGGTTaGCTTCCCAGGAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QESNIGFCSKATAPVSYVGAEEG*LPRKFR
Trigger: CCTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACC...AACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTGTGCAACTGGCTGTCTaGCAGGAGAACCACACTCTG +
Preference number: 4 (lower is better)
Translates to: QESNIGFCSKATAPVSYVVQLAV*QENHTL
Trigger: CAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCAC...AACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGAAAACTGTTTCTAACTaGCCAGGGTCCAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: PQNWSPEEILLVLHTNDLKTVSN*PGSKGT
Trigger: TGTGCCTTTGGACCCTGGTCAGTTAGAAACAGTTTT...CAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACGGCCCGCATCTTCTCTaGCCATCTCAGAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: LFKSNSPCVLCLTYKHLHGPHLL*PSQSRT
Trigger: GGTTCTGCTCTGAGATGGTCAGAGAAGATGCGGGCC...GTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp ATATGGCAGCTTAGAATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGGGTCCTACATACAAATaGCCTGCAGAAACTCAGATC +
Preference number: 4 (lower is better)
Translates to: IWQLRICHIRVPKTGHLRGPTYK*PAETQI
Trigger: GATCTGAGTTTCTGCAGGTCATTTGTATGTAGGACC...CCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAATTCTAAGCTGCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp GAGGGGAAGGATCACACACACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTTTTTCAAGGAAGTGCTaGAGACCTTGTCGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: EGKDHTHKPKSRAMQNACFSRKC*RPCRRF
Trigger: GAAGCGACGACAAGGTCTGCAGCACTTCCTTGAAAA...ACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGTGTGTGTGATCCTTCCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp AGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTACCTTTTCAAGGAAGTaGTGCAGACCTTGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: RSQESNIGFCSKATAPVSTFSRK*CRPCRR
Trigger: GCGACGACAAGGTCTGCAGCACTTCCTTGAAAAGGT...AGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp CACACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTGGCACTCGGCTCCTACTACATACAAATGACCTaGAGAAACTCAGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: HTNLRVEQCRMPVALGSYYIQMT*RNSDPR
Trigger: CCTGGGATCTGAGTTTCTGCAGGTCATTTGTATGTA...GTAGGAGCCGAGTGCCACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp CAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGTGGCAGCTTAGAATTTaGCACATACGGGTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: QNWSPEEILLVLHTNDLQWQLRI*HIRVPK
Trigger: TTTGGGGACCCGTATGTGGCAAATTCTAAGCTGCCA...CTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp ACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACATGGCAGCTTAGAATTTaGCACATACGGGTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: TKCSRATAKTEASQDGDTWQLRI*HIRVPK
Trigger: TTTGGGGACCCGTATGTGGCAAATTCTAAGCTGCCA...TGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR GCA 90 bp CCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCTCCCACAAACAAAGTaGTCTAGGGCTACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: PQNWSPEEILLVLHTNDLLPQTK*SRATAK
Trigger: TTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAG...CAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR GCA 90 bp GAAAGTAAATATTCATCCCCCTGTCCATGCAAGGAGGTAGGCAAGAGGCCAGCCAGATGGCCACATGTCTaGTTTATAACCAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: ESKYSSPCPCKEVGKRPARWPHV*FITRRD
Trigger: GTCTCTTCTGGTTATAAAGCAGACATGTGGCCATCT...GGCTGGCCTCTTGCCTACCTCCTTGCATGGACAGGGGGATGAATATTTACTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCGCCCTTGCACCCCACTaGACTGCGCAACACAGCAGA +
Preference number: 4 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFALAPH*TAQHSR
Trigger: TCTGCTGTGTTGCGCAGTGCAGTGGGGTGCAAGGGC...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp AAGTGCTGCAGACCTTGTCGTCGCTTCTCAATGAACTCATCTGAGGTGCCGAAGACACCAAAAGCCCATTaGAAGGAAACATCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: KCCRPCRRFSMNSSEVPKTPKAH*KETSEN
Trigger: GTTCTCAGATGTTTCCTTCCAATGGGCTTTTGGTGT...CTTCGGCACCTCAGATGAGTTCATTGAGAAGCGACGACAAGGTCTGCAGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583320.5
CDS-3UTR CCA 90 bp CACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACTCAGATACCTCCTCCTGTTCTTaGTTCTCCGACATCCTACAC +
Preference number: 4 (lower is better)
Translates to: HLRRYSWSYIQMTCRNSDTSSCS*FSDILH
Trigger: GTGTAGGATGTCGGAGAACCAAGAACAGGAGGAGGT...ATCTGAGTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000581705.5
CDS-3UTR CCA 90 bp AGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTAGGAATAGGTGCAACTaGCTGTCTGACAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: RSQESNIGFCSKATAPVSRNRCN*LSDRRT
Trigger: GGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCCT...AGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp AGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTCACAGACTGAAGAGTaGAGGTTCCCTCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: RSQESNIGFCSKATAPVSSQTEE*RFPLWV
Trigger: GACCCAAAGAGGGAACCTCCACTCTTCAGTCTGTGA...AGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp TCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACTCAGATCACAGACTGAAGAGTaGAGGTTCCCTCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: SPEEILLVLHTNDLQKLRSQTEE*RFPLWV
Trigger: GACCCAAAGAGGGAACCTCCACTCTTCAGTCTGTGA...TCTGAGTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp AAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAACACAGTATTTGTTCCCATaGAAGAGGCATAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KCSRATAKTEASQDGDTTQYLFP*KRHKGL
Trigger: CAGCCCCTTATGCCTCTTCCATGGGAACAAATACTG...TGTTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp ACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGGCTGTACGGGTCCCCAAAACTaGTCACCTGAGGAGATACTC +
Preference number: 4 (lower is better)
Translates to: TYKHLHSICSHGRGIRGCTGPQN*SPEEIL
Trigger: GAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGT...ACAGCCCCTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp GGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAACATAACCACTCCCATAACCACTCCCAGTaGGATGATGTTCAATATGGC +
Preference number: 4 (lower is better)
Translates to: GLQQKLKPAKMGIQHNHSHNHSQ*DDVQYG
Trigger: GCCATATTGAACATCATCCCACTGGGAGTGGTTATG...GGAGTGGTTATGTTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp ATATGGCAGCTTAGAATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGACCCTGCGGAAAAGATaGCCACATGTCTGCTTTATA +
Preference number: 4 (lower is better)
Translates to: IWQLRICHIRVPKTGHLRTLRKR*PHVCFI
Trigger: TATAAAGCAGACATGTGGCCATCTTTTCCGCAGGGT...CCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAATTCTAAGCTGCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp TGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGACAGCAGAGACGCTGGTaGCGGAAGCCCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CVLCLTYKHLHSICSHGRQQRRW*RKPWRQ
Trigger: CTGCCTCCAGGGCTTCCGCCACCAGCGTCTCTGCTG...TCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp TTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATACAGCAGAGACGCTGGTaGCGGAAGCCCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LCLTYKHLHSICSHGRGIQQRRW*RKPWRQ
Trigger: CTGCCTCCAGGGCTTCCGCCACCAGCGTCTCTGCTG...TATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp CTCAGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTGGATCCCAGCTCTTTaGAAGACAATCCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LRSQESNIGFCSKATAPVWIPAL*KTILPP
Trigger: TGGAGGAAGGATTGTCTTCCAAAGAGCTGGGATCCA...CACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp CTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACGGTGCCGAAGAAGGTTaGCTTCCCAGGAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LFKSNSPCVLCLTYKHLHGAEEG*LPRKFR
Trigger: CCTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACC...GTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp TCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACTCAGAGGCCCAGCCACAGTTTaGCATAGCATATCGAAGAAT +
Preference number: 4 (lower is better)
Translates to: SPEEILLVLHTNDLQKLRGPATV*HSISKN
Trigger: ATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCC...TCTGAGTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCGCCCTCCTCACAGACTaGAGAGTGGAGGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFALLTD*RVEVPS
Trigger: AGAGGGAACCTCCACTCTTCAGTCTGTGAGGAGGGC...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAAAAAACTGTTTCTAACTaGCCAGGGTCCAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: QSALGLQQKLKPAKMGIQKTVSN*PGSKGT
Trigger: TGTGCCTTTGGACCCTGGTCAGTTAGAAACAGTTTT...TTGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp GGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGGCCCGCATCTTCTCTaGCCATCTCAGAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: GSVQKQQPLCLMFNLQTSGPHLL*PSQSRT
Trigger: GGTTCTGCTCTGAGATGGTCAGAGAAGATGCGGGCC...AGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTCCAAAACTGGTCACCTaGGGAGATACTCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: QESNIGFCSKATAPVSYVPKLVT*GDTPGP
Trigger: AGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGG...AACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAATTCAGTGGTATCAGTaGAAGAAAAAGCAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: HTGPQNWSPEEILLVLHTIQWYQ*KKKQGG
Trigger: ACCTCCTTGCTTTTTCTTTCACTGATACCACTGAAT...TGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp CAAGAGGCCAGCCTCCCACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAATACAGAGCACAGTTCTaGAGCATTATTTCCACACTG +
Preference number: 4 (lower is better)
Translates to: QEASLPQTKCSRATAKTEYRAQF*SIISTL
Trigger: CAGTGTGGAAATAATGCTTCAGAACTGTGCTCTGTA...TTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAGGCTGGCCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp CAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTGTACTGCCAACAAATaGTCCAGGCTGGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: QESNIGFCSKATAPVSYVCTANK*SRLAPE
Trigger: CTCAGGAGCCAGCCTGGATCATTTGTTGGCAGTACA...AACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393405.6
ENST00000581705.5
CDS-3UTR GCA 90 bp AGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTAGGAGAACCACACTCTaGAGGACCTTTTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RSQESNIGFCSKATAPVSRRTTL*RTFSRK
Trigger: CTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCT...AGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp TCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACTCAGAAGGAGAACCACACTCTaGAGGACCTTTTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPEEILLVLHTNDLQKLRRRTTL*RTFSRK
Trigger: CTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCT...TCTGAGTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp AGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTGGCAGCTTAGAATTTaGCACATACGGGTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: RSQESNIGFCSKATAPVSWQLRI*HIRVPK
Trigger: TTTGGGGACCCGTATGTGGCAAATTCTAAGCTGCCA...AGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp GTTGACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGCTCCCACAAACAAAGTaGTCTAGGGCTACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: VDKLYFSFSTWHLRQTARLPQTK*SRATAK
Trigger: TTTTGCTGTAGCCCTAGAGCACTTTGTTTGTGGGAG...CCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp AAGGTTCACGCCCAGAACTGTGAGAAGAGTTGGATCCCAGCTCTTTGGAAGACAAGATGGCCACATGTCTaGTTTATAACCAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: KVHAQNCEKSWIPALWKTRWPHV*FITRRD
Trigger: GTCTCTTCTGGTTATAAAGCAGACATGTGGCCATCT...TGTCTTCCAAAGAGCTGGGATCCAACTCTTCTCACAGTTCTGGGCGTGAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp ACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGGCTGTCTGGAGGCAGGGAGCTaGTACCAAAGGAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TYKHLHSICSHGRGIRGCLEAGS*YQRRRK
Trigger: TTTTCTTCTCCTTTGGTAGCAGCTCCCTGCCTCCAG...ACAGCCCCTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp ATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCCTGACATTTTGGATTTaGCTCTGTAGGTTTTCTATC +
Preference number: 4 (lower is better)
Translates to: ICHIRVPKTGHLRRYSWSLTFWI*LCRFSI
Trigger: GATAGAAAACCTACAGAGGCAAATCCAAAATGTCAG...GGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR CCA 90 bp AACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACCTCCTACCCGATCTTaGAAGAAAGCAGCAACTCTT +
Preference number: 4 (lower is better)
Translates to: NWSPEEILLVLHTNDLQKPPTRS*KKAATL
Trigger: AAGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGG...TTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCGGTCCTTTTCTTCACTaGGAGGCGGTGAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFGPFLH*EAVRES
Trigger: GCTCTCCCTCACCGCCTCCCAGTGAAGAAAAGGACC...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp AGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTGGAGGTTCCCTCTTTaGGTCTTCCAAAATCACAGC +
Preference number: 4 (lower is better)
Translates to: RSQESNIGFCSKATAPVSWRFPL*VFQNHS
Trigger: GCTGTGATTTTGGAAGACCCAAAGAGGGAACCTCCA...AGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp ACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGGCTGTTCACAGACTGAAGAGTaGAGGTTCCCTCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: TYKHLHSICSHGRGIRGCSQTEE*RFPLWV
Trigger: GACCCAAAGAGGGAACCTCCACTCTTCAGTCTGTGA...ACAGCCCCTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp AGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTCAGTATTTGTTCCCATaGAAGAGGCATAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSQESNIGFCSKATAPVSQYLFP*KRHKGL
Trigger: CAGCCCCTTATGCCTCTTCCATGGGAACAAATACTG...AGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp GAGGGGAAGGATCACACACACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTCACAGCTGCACCATTTaGAGCATTGGGCTCATTAAT +
Preference number: 4 (lower is better)
Translates to: EGKDHTHKPKSRAMQNACHSCTI*SIGLIN
Trigger: ATTAATGAGCCCAATGCTCCAAATGGTGCAGCTGTG...ACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGTGTGTGTGATCCTTCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR CCA 90 bp CTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATGGCCCGGGCTCTGAGTaGGATTCCCGCTTCCGAATA +
Preference number: 4 (lower is better)
Translates to: LMFNLQTSAQYLFPWKRHGPGSE*DSRFRI
Trigger: TATTCGGAAGCGGGAATCCCACTCAGAGCCCGGGCC...ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
CDS-3UTR TCA 90 bp GTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGGTGCAACTGGCTGTCTaGCAGGAGAACCACACTCTG +
Preference number: 4 (lower is better)
Translates to: VLFKSNSPCVLCLTYKHLVQLAV*QENHTL
Trigger: CAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCAC...CAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp TCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCAGTGCAACTGGCTGTCTaGCAGGAGAACCACACTCTG +
Preference number: 4 (lower is better)
Translates to: SVQKQQPLCLMFNLQTSAVQLAV*QENHTL
Trigger: CAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCAC...TGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGACACATTCAGTGGTATCAGTaGAAGAAAAAGCAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: AVMTDLCQSAQAEVTRRHIQWYQ*KKKQGG
Trigger: ACCTCCTTGCTTTTTCTTTCACTGATACCACTGAAT...GTGTCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR GCA 90 bp CTCAGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTACATACAAATGACCTaGAGAAACTCAGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: LRSQESNIGFCSKATAPVYIQMT*RNSDPR
Trigger: CCTGGGATCTGAGTTTCTGCAGGTCATTTGTATGTA...CACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp ACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGCCAGGGCTTTGCATCTaGCTGTTGACAAACTTTATT +
Preference number: 4 (lower is better)
Translates to: TNFISLSAPGTSDRLRGWPGLCI*LLTNFI
Trigger: AATAAAGTTTGTCAACAGGCAGATGCAAAGCCCTGG...CCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR CCA 90 bp GTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGTCAGGCACCGAGAGCTaGCTTTGCAGGAATAGGTGC +
Preference number: 4 (lower is better)
Translates to: VLFKSNSPCVLCLTYKHLSGTES*LCRNRC
Trigger: GCACCTATTCCTGCAAAGCCAGCTCTCGGTGCCTGA...CAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CAGCAGCAGGAGTCACAGCACCAGTTCCATTCAGTGGTATCAGTGAAAGAAAAAGCCCACACTTCTAAATaGTCCTTTTCTTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: QQQESQHQFHSVVSVKEKAHTSK*SFSSLG
Trigger: TCCCAGTGAAGAAAAGGACCATTTAGAAGTGTGGGC...TTTTTCTTTCACTGATACCACTGAATGGAACTGGTGCTGTGACTCCTGCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp TCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACTCAGACTGAGGAGATACTCCTaGTCCTACATACAAATGACC +
Preference number: 4 (lower is better)
Translates to: SPEEILLVLHTNDLQKLRLRRYS*SYIQMT
Trigger: GGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAG...TCTGAGTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCAATGCAGAATGCCTGTaGCACTCGGCTCCTACCAGC +
Preference number: 4 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFNAECL*HSAPTS
Trigger: GCTGGTAGGAGCCGAGTGCCACAGGCATTCTGCATT...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp TGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGATGCACTCGGGGGTCCTaGACACGCACTGTAATCACC +
Preference number: 4 (lower is better)
Translates to: CVLCLTYKHLHSICSHGRCTRGS*TRTVIT
Trigger: GGTGATTACAGTGCGTGTTCAGGACCCCCGAGTGCA...TCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATGGTGCCGAAGAAGGTTaGCTTCCCAGGAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LMFNLQTSAQYLFPWKRHGAEEG*LPRKFR
Trigger: CCTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACC...ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp ATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGTGCCGAAGAAGGTTaGCTTCCCAGGAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: MFNLQTSAQYLFPWKRHKGAEEG*LPRKFR
Trigger: CCTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACC...CTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGTCGTCGCTTCTCAATaGACTCATCTGAGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: GSVQKQQPLCLMFNLQTSVVASQ*THLRCR
Trigger: TCGGCACCTCAGATGAGTTCATTGAGAAGCGACGAC...AGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTGGCCCAGCCACAGTTTaGCATAGCATATCGAAGAAT +
Preference number: 4 (lower is better)
Translates to: QESNIGFCSKATAPVSYVGPATV*HSISKN
Trigger: ATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCC...AACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp TTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAGGCCCGCATCTTCTCTaGCCATCTCAGAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: LCLTYKHLHSICSHGRGIGPHLL*PSQSRT
Trigger: GGTTCTGCTCTGAGATGGTCAGAGAAGATGCGGGCC...TATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCAGGGGCTGTAATGACTaGCCTCTGTCAATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFRGCND*PLSISP
Trigger: TGGGCTGATTGACAGAGGTCAGTCATTACAGCCCCT...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCCAAAACTGGTCACCTaGGGAGATACTCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLFKSNSPCVLCLTYKHLPKLVT*GDTPGP
Trigger: AGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGG...CAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CATCTGCCTGTTGACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGACACCAAAAGCCCATTaGAAGGAAACATCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: HLPVDKLYFSFSTWHLRQTPKAH*KETSEN
Trigger: GTTCTCAGATGTTTCCTTCCAATGGGCTTTTGGTGT...CTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGTCAACAGGCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR CCA 90 bp TCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACATCAGACACAGTCATaGTACTTCGGCCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: SVQKQQPLCLMFNLQTSAHQTQS*YFGPGH
Trigger: GTGTCCAGGGCCGAAGTACCATGACTGTGTCTGATG...TGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp CAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTGGTCCTACATACAAATaGCCTGCAGAAACTCAGATC +
Preference number: 4 (lower is better)
Translates to: QESNIGFCSKATAPVSYVGPTYK*PAETQI
Trigger: GATCTGAGTTTCTGCAGGTCATTTGTATGTAGGACC...AACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCACCTTTTCAAGGAAGTaGTGCAGACCTTGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFTFSRK*CRPCRR
Trigger: GCGACGACAAGGTCTGCAGCACTTCCTTGAAAAGGT...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp CTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACTGGCAGCTTAGAATTTaGCACATACGGGTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LFKSNSPCVLCLTYKHLHWQLRI*HIRVPK
Trigger: TTTGGGGACCCGTATGTGGCAAATTCTAAGCTGCCA...GTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp TCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCATACCAGCCAGGGCTTTaGATCTGCCTGTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: SVQKQQPLCLMFNLQTSAYQPGL*ICLLTN
Trigger: GTTTGTCAACAGGCAGATGCAAAGCCCTGGCTGGTA...TGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR CCA 90 bp ACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGGCTGTACACCAAAAGCCCATTaGAAGGAAACATCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: TYKHLHSICSHGRGIRGCTPKAH*KETSEN
Trigger: GTTCTCAGATGTTTCCTTCCAATGGGCTTTTGGTGT...ACAGCCCCTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000582104.5
CDS-3UTR CCA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCAGGAATAGGTGCAACTaGCTGTCTGACAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFRNRCN*LSDRRT
Trigger: GGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCCT...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp TCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCAAGGAATAGGTGCAACTaGCTGTCTGACAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: SVQKQQPLCLMFNLQTSARNRCN*LSDRRT
Trigger: GGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCCT...TGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp GTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGATGGTACTTCGGCCCTaGACACAGGCTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: VLFKSNSPCVLCLTYKHLMVLRP*TQASIS
Trigger: TGAGATAGAAGCCTGTGTCCAGGGCCGAAGTACCAT...CAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACCCTCCTACCCGATCTTaGAAGAAAGCAGCAACTCTT +
Preference number: 4 (lower is better)
Translates to: LFKSNSPCVLCLTYKHLHPPTRS*KKAATL
Trigger: AAGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGG...GTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACTGGAGGTTCCCTCTTTaGGTCTTCCAAAATCACAGC +
Preference number: 4 (lower is better)
Translates to: LFKSNSPCVLCLTYKHLHWRFPL*VFQNHS
Trigger: GCTGTGATTTTGGAAGACCCAAAGAGGGAACCTCCA...GTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGGGCCCAGCCACAGTTTaGCATAGCATATCGAAGAAT +
Preference number: 4 (lower is better)
Translates to: VLFKSNSPCVLCLTYKHLGPATV*HSISKN
Trigger: ATTCTTCGATATGCTATGTCAAACTGTGGCTGGGCC...CAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp TGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGATCTCCTTTAGCCAGGTaGGAAGAGCTCTGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: CVLCLTYKHLHSICSHGRSPLAR*EELCLS
Trigger: AGAGAGGCAGAGCTCTTCTCACCTGGCTAAAGGAGA...TCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp CTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATACCTTTTCAAGGAAGTaGTGCAGACCTTGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: LMFNLQTSAQYLFPWKRHTFSRK*CRPCRR
Trigger: GCGACGACAAGGTCTGCAGCACTTCCTTGAAAAGGT...ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp CTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATCTTTGCAGGAATAGGTaGAACTGGCTGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: LMFNLQTSAQYLFPWKRHLCRNR*NWLSDR
Trigger: CCTGTCAGACAGCCAGTTGCACCTATTCCTGCAAAG...ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp CAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTACATACAAATGACCTaGAGAAACTCAGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: QESNIGFCSKATAPVSYVYIQMT*RNSDPR
Trigger: CCTGGGATCTGAGTTTCTGCAGGTCATTTGTATGTA...AACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp GTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGTCACCTCCTGTTCTCTaGAGACCATACTCTTACCTC +
Preference number: 4 (lower is better)
Translates to: VLFKSNSPCVLCLTYKHLSPPVL*RPYSYL
Trigger: GAGGTAAGAGTATGGTCTGCAGAGAACAGGAGGTGA...CAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580219.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATATGGTACTTCGGCCCTaGACACAGGCTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: LMFNLQTSAQYLFPWKRHMVLRP*TQASIS
Trigger: TGAGATAGAAGCCTGTGTCCAGGGCCGAAGTACCAT...ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp TGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGACATCAGACACAGTCATaGTACTTCGGCCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: CVLCLTYKHLHSICSHGRHQTQS*YFGPGH
Trigger: GTGTCCAGGGCCGAAGTACCATGACTGTGTCTGATG...TCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCTCCTACCCGATCTTaGAAGAAAGCAGCAACTCTT +
Preference number: 4 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFPPTRS*KKAATL
Trigger: AAGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGG...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATTCACAGACTGAAGAGTaGAGGTTCCCTCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: LMFNLQTSAQYLFPWKRHSQTEE*RFPLWV
Trigger: GACCCAAAGAGGGAACCTCCACTCTTCAGTCTGTGA...ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp ATACAACATAACCACTCCCAGTGGGATGATGTTCAATATGGCAGCTTAGAATTTCAGTATTTGTTCCCATaGAAGAGGCATAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: IQHNHSQWDDVQYGSLEFQYLFP*KRHKGL
Trigger: CAGCCCCTTATGCCTCTTCCATGGGAACAAATACTG...AAATTCTAAGCTGCCATATTGAACATCATCCCACTGGGAGTGGTTATGTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp CCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGACAGTATTTGTTCCCATaGAAGAGGCATAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PCVLCLTYKHLHSICSHGQYLFP*KRHKGL
Trigger: CAGCCCCTTATGCCTCTTCCATGGGAACAAATACTG...TCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGACAAAATAAAGGCCCCTaGGCTGTTACTGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PCVLCLTYKHLHSICSHGQNKGP*AVTVPS
Trigger: AGAGGGAACAGTAACAGCCCAGGGGCCTTTATTTTG...TCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CCA 90 bp TCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACTTACCTCCTGTTCTTaGTTCTCCGACATCCTACAC +
Preference number: 4 (lower is better)
Translates to: SVQKQQPLCLMFNLQTSALTSCS*FSDILH
Trigger: GTGTAGGATGTCGGAGAACCAAGAACAGGAGGTAAG...TGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580219.5
ENST00000582104.5
CDS-3UTR TCA 90 bp GTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGAAAACTGTTTCTAACTaGCCAGGGTCCAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: VLFKSNSPCVLCLTYKHLKTVSN*PGSKGT
Trigger: TGTGCCTTTGGACCCTGGTCAGTTAGAAACAGTTTT...CAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp ATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGAGGAGAACCACACTCTaGAGGACCTTTTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: MFNLQTSAQYLFPWKRHKRRTTL*RTFSRK
Trigger: CTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCT...CTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp TTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATACTTTGCAGGAATAGGTaGAACTGGCTGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: LCLTYKHLHSICSHGRGILCRNR*NWLSDR
Trigger: CCTGTCAGACAGCCAGTTGCACCTATTCCTGCAAAG...TATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp ATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGTCACCTCCTGTTCTCTaGAGACCATACTCTTACCTC +
Preference number: 4 (lower is better)
Translates to: MFNLQTSAQYLFPWKRHKSPPVL*RPYSYL
Trigger: GAGGTAAGAGTATGGTCTGCAGAGAACAGGAGGTGA...CTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580219.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATCCTCCTACCCGATCTTaGAAGAAAGCAGCAACTCTT +
Preference number: 4 (lower is better)
Translates to: LMFNLQTSAQYLFPWKRHPPTRS*KKAATL
Trigger: AAGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGG...ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCGCCCACACTTCTAAATaGTCCTTTTCTTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFAHTSK*SFSSLG
Trigger: TCCCAGTGAAGAAAAGGACCATTTAGAAGTGTGGGC...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCTGAGGAGATACTCCTaGTCCTACATACAAATGACC +
Preference number: 4 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFLRRYS*SYIQMT
Trigger: GGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAG...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp TCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACATAACCACTCCCAGTaGGATGATGTTCAATATGGC +
Preference number: 4 (lower is better)
Translates to: SVQKQQPLCLMFNLQTSAHNHSQ*DDVQYG
Trigger: GCCATATTGAACATCATCCCACTGGGAGTGGTTATG...TGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CCA 90 bp GTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGAACTGTGAGAAGAGTTaGATCCCAGCTCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: VLFKSNSPCVLCLTYKHLNCEKS*IPALWK
Trigger: CTTCCAAAGAGCTGGGATCCAACTCTTCTCACAGTT...CAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR TCA 90 bp CTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAAACTGTTTCTAACTaGCCAGGGTCCAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: LMFNLQTSAQYLFPWKRHKTVSN*PGSKGT
Trigger: TGTGCCTTTGGACCCTGGTCAGTTAGAAACAGTTTT...ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR TCA 90 bp ATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGTCCTACATACAAATaGCCTGCAGAAACTCAGATC +
Preference number: 4 (lower is better)
Translates to: MFNLQTSAQYLFPWKRHKGPTYK*PAETQI
Trigger: GATCTGAGTTTCTGCAGGTCATTTGTATGTAGGACC...CTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp TGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGATTTTCAAGGAAGTGCTaGAGACCTTGTCGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: CVLCLTYKHLHSICSHGRFSRKC*RPCRRF
Trigger: GAAGCGACGACAAGGTCTGCAGCACTTCCTTGAAAA...TCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp TTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGAGAACCACACTCTaGAGGACCTTTTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LCLTYKHLHSICSHGRGIRRTTL*RTFSRK
Trigger: CTTCCTTGAAAAGGTCCTGCAGAGTGTGGTTCTCCT...TATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp ATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGCCCACACTTCTAAATaGTCCTTTTCTTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: MFNLQTSAQYLFPWKRHKAHTSK*SFSSLG
Trigger: TCCCAGTGAAGAAAAGGACCATTTAGAAGTGTGGGC...CTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp TGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGATGGAGGTTCCCTCTTTaGGTCTTCCAAAATCACAGC +
Preference number: 4 (lower is better)
Translates to: CVLCLTYKHLHSICSHGRWRFPL*VFQNHS
Trigger: GCTGTGATTTTGGAAGACCCAAAGAGGGAACCTCCA...TCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp TGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGCCCACACTTCTAAATaGTCCTTTTCTTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: CVLCLTYKHLHSICSHGRAHTSK*SFSSLG
Trigger: TCCCAGTGAAGAAAAGGACCATTTAGAAGTGTGGGC...TCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CCA 90 bp TTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATACATAACCACTCCCAGTaGGATGATGTTCAATATGGC +
Preference number: 4 (lower is better)
Translates to: LCLTYKHLHSICSHGRGIHNHSQ*DDVQYG
Trigger: GCCATATTGAACATCATCCCACTGGGAGTGGTTATG...TATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp CTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATATTCAGTGGTATCAGTaGAAGAAAAAGCAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LMFNLQTSAQYLFPWKRHIQWYQ*KKKQGG
Trigger: ACCTCCTTGCTTTTTCTTTCACTGATACCACTGAAT...ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR TCA 90 bp TGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGATACAGAGCACAGTTCTaGAGCATTATTTCCACACTG +
Preference number: 4 (lower is better)
Translates to: CVLCLTYKHLHSICSHGRYRAQF*SIISTL
Trigger: CAGTGTGGAAATAATGCTTCAGAACTGTGCTCTGTA...TCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR GCA 90 bp TGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGATACATACAAATGACCTaGAGAAACTCAGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: CVLCLTYKHLHSICSHGRYIQMT*RNSDPR
Trigger: CCTGGGATCTGAGTTTCTGCAGGTCATTTGTATGTA...TCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR GCA 90 bp ATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGTTTCTATCCTCGCCTTaGTCTGCTGCATCATATAAA +
Preference number: 4 (lower is better)
Translates to: MFNLQTSAQYLFPWKRHKFLSSP*SAASYK
Trigger: TTTATATGATGCAGCAGAGCAAGGCGAGGATAGAAA...CTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS CCA 90 bp CCCGGGTGCCCGGGACGCCCCGCCCCTACAGGCCCGGGCTCTGAGTaGGATTCCCGCTTCCGAATAGCGCGGCTCCGCTGGCCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: PGCPGRPAPTGPGSE*DSRFRIARLRWPRP
Trigger: GGGCCTTGGCCAGCGGAGCCGCGCTATTCGGAAGCGGGAATCCCACTCAGAGCCCGGGCCTGTAGGGGCGGGGCGTCCCGGGCACCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000580875.1
ENST00000581705.5
ENST00000583320.5
CDS TCA 90 bp CAATCCCGGGTGCCCGGGACGCCCCGCCCCTACAGGCCCGGGCTCTaGGTGGGATTCCCGCTTCCGAATAGCGCGGCTCCGCTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: QSRVPGTPRPYRPGL*VGFPLPNSAAPLAK
Trigger: CTTGGCCAGCGGAGCCGCGCTATTCGGAAGCGGGAATCCCACTCAGAGCCCGGGCCTGTAGGGGCGGGGCGTCCCGGGCACCCGGGATTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000580875.1
ENST00000581705.5
ENST00000583320.5
CDS-3UTR CAA 90 bp CACCCCACTGCACTGCGCAACACAGCAGAGACGCTGGTGGCGGAAGCCCTGGAGCTGAAGGAGAGCGTGTaGTTTCTCATCTCCATCCCC +
Preference number: 5 (lower is better)
Translates to: HPTALRNTAETLVAEALELKESV*FLISIP
Trigger: GGGGATGGAGATGAGAAACAACACGCTCTCCTTCAG...CTCCAGGGCTTCCGCCACCAGCGTCTCTGCTGTGTTGCGCAGTGCAGTGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CAA 90 bp CTGCTTTCTCAGCCACACGAACTCACGGTAGCGGCGCCGCACACAGGAAGTCTTCGCACACAGGAAGTCTaGGCAGTAAAGGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LLSQPHELTVAAPHTGSLRTQEV*AVKALL
Trigger: CAGCAAAGCCTTTACTGCCAAGACTTCCTGTGTGCG...AAGACTTCCTGTGTGCGGCGCCGCTACCGTGAGTTCGTGTGGCTGAGAAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583320.5
CDS-3UTR CAA 90 bp TACCTGCCCTGTGCCCAGTCCCACCTGAGTAAGTCTCCTGGCCCGCATCTTCTCGAAGTGCTGCAGACCTaGTCGTCGCTTCTCAATGAA +
Preference number: 5 (lower is better)
Translates to: YLPCAQSHLSKSPGPHLLEVLQT*SSLLNE
Trigger: TTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTC...GAGAAGATGCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCACAGGGCAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp TACCTGCCCTGTGCCCAGTCCCACCTGAGTAAGTCTCCTGGCCCGCATCTTCTCTCCTCCTACCCGATCTaGGAAGAAAGCAGCAACTCT +
Preference number: 5 (lower is better)
Translates to: YLPCAQSHLSKSPGPHLLSSYPI*EESSNS
Trigger: AGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGGA...GAGAAGATGCGGGCCAGGAGACTTACTCAGGTGGGACTGGGCACAGGGCAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp CACCCCACTGCACTGCGCAACACAGCAGAGACGCTGGTGGCGGAAGCCCTGGAGGCACCATTTGGAGCATaGGGCTCATTAATATTCATG +
Preference number: 5 (lower is better)
Translates to: HPTALRNTAETLVAEALEAPFGA*GSLIFM
Trigger: CATGAATATTAATGAGCCCAATGCTCCAAATGGTGC...CTCCAGGGCTTCCGCCACCAGCGTCTCTGCTGTGTTGCGCAGTGCAGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR CAA 90 bp GAGGCGGTGAGGGAGAGCTCCTCCTACCCGATCTTGGAAGAAAGCAGCAACTCTAGGTGCCGAAGAAGGTaGACTTCCCAGGAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: EAVRESSSYPILEESSNSRCRRR*TSQEVQ
Trigger: CTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACCT...AGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGGAGCTCTCCCTCACCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR CAA 90 bp CTGCTTTCTCAGCCACACGAACTCACGGTAGCGGCGCCGCACACAGGAAGTCTTGAAGTGCTGCAGACCTaGTCGTCGCTTCTCAATGAA +
Preference number: 5 (lower is better)
Translates to: LLSQPHELTVAAPHTGSLEVLQT*SSLLNE
Trigger: TTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTC...AAGACTTCCTGTGTGCGGCGCCGCTACCGTGAGTTCGTGTGGCTGAGAAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583320.5
CDS-3UTR CAA 90 bp GAGCCCTCTCTTTCAGGCAGGCAGAAACAAAGCCCTTGCACCCCACTGCACTGCATCACATCCATGTCTTaGAATGGCTCCTGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: EPSLSGRQKQSPCTPLHCITSMS*NGSCCP
Trigger: GGGACAGCAGGAGCCATTCAAAGACATGGATGTGAT...GCAGTGCAGTGGGGTGCAAGGGCTTTGTTTCTGCCTGCCTGAAAGAGAGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR CAA 90 bp CTGCTTTCTCAGCCACACGAACTCACGGTAGCGGCGCCGCACACAGGAAGTCTTGTAAAGGCTTTGCTGTaGGTCTGTAATCCCAGCTAC +
Preference number: 5 (lower is better)
Translates to: LLSQPHELTVAAPHTGSLVKALL*VCNPSY
Trigger: GTAGCTGGGATTACAGACCAACAGCAAAGCCTTTAC...AAGACTTCCTGTGTGCGGCGCCGCTACCGTGAGTTCGTGTGGCTGAGAAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583320.5
CDS-3UTR CAA 90 bp CCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATCGCACACAGGAAGTCTaGGCAGTAAAGGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: PHTGPQNWSPEEILLVLHRTQEV*AVKALL
Trigger: CAGCAAAGCCTTTACTGCCAAGACTTCCTGTGTGCG...ATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000582104.5
CDS-3UTR CAA 90 bp GACAATCCTTCCTCCAGTGGTGAACTTGAGCTGCACACACAATGCAGGAGGGCTAGGTGCCGAAGAAGGTaGACTTCCCAGGAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: DNPSSSGELELHTQCRRARCRRR*TSQEVQ
Trigger: CTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACCT...AGCCCTCCTGCATTGTGTGTGCAGCTCAAGTTCACCACTGGAGGAAGGATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CAA 90 bp ACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTGGCACTCGGCTCCTACCAGCACCTCCTCCTGTTCTaGGTTCTCCGACATCCTACA +
Preference number: 5 (lower is better)
Translates to: TNLRVEQCRMPVALGSYQHLLLF*VLRHPT
Trigger: TGTAGGATGTCGGAGAACCAAGAACAGGAGGAGGTG...CTGGTAGGAGCCGAGTGCCACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CAA 90 bp GGAATAGGTGCAACTGGCTGTCTGACAGGAGAACCACACTCTGCAGGACCTTTTCACCTCCTCCTGTTCTaGGTTCTCCGACATCCTACA +
Preference number: 5 (lower is better)
Translates to: GIGATGCLTGEPHSAGPFHLLLF*VLRHPT
Trigger: TGTAGGATGTCGGAGAACCAAGAACAGGAGGAGGTG...AAAAGGTCCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR CAA 90 bp CCCCTCCACTCTGAACTAAATGCCATGACAGTCCCACAGCATAGGCTGGTAGTAAGGTGCCGAAGAAGGTaGACTTCCCAGGAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: PLHSELNAMTVPQHRLVVRCRRR*TSQEVQ
Trigger: CTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACCT...TACTACCAGCCTATGCTGTGGGACTGTCATGGCATTTAGTTCAGAGTGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CAA 90 bp CATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAGGTGCCGAAGAAGGTaGACTTCCCAGGAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: HTGPQNWSPEEILLVLHTRCRRR*TSQEVQ
Trigger: CTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACCT...TGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp CTTTGCAGGAATAGGTGCAACTGGCTGTCTGACAGGAGAACCACACTCTGCAGGGAAGTGCTGCAGACCTaGTCGTCGCTTCTCAATGAA +
Preference number: 5 (lower is better)
Translates to: LCRNRCNWLSDRRTTLCREVLQT*SSLLNE
Trigger: TTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTC...CCTGCAGAGTGTGGTTCTCCTGTCAGACAGCCAGTTGCACCTATTCCTGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR CAA 90 bp TTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTAGAAGTGCTGCAGACCTaGTCGTCGCTTCTCAATGAA +
Preference number: 5 (lower is better)
Translates to: LPHTGPQNWSPEEILLVLEVLQT*SSLLNE
Trigger: TTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTC...TAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp TTCTCTTTCAGCACCTGGCACCTCAGACAGACTGCGAGGATGGAAGCAGCATCAGGACAGAATGCCTCATaGTCTGAAGGAGAGCGTGTT +
Preference number: 5 (lower is better)
Translates to: FSFSTWHLRQTARMEAASGQNAS*SEGERV
Trigger: AACACGCTCTCCTTCAGACAATGAGGCATTCTGTCC...TGATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTGCTGAAAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CAA 90 bp CCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGAGGTGCCGAAGAAGGTaGACTTCCCAGGAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: PQNWSPEEILLVLHTNDLRCRRR*TSQEVQ
Trigger: CTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACCT...CAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp CATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACATCCTCCTACCCGATCTaGGAAGAAAGCAGCAACTCT +
Preference number: 5 (lower is better)
Translates to: HTGPQNWSPEEILLVLHTSSYPI*EESSNS
Trigger: AGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGGA...TGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp ACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGAAACCATGACCATGAGCTGTaGTGCAGGTCTCAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: TGHLRRYSWSYIQMTCRNHDHEL*CRSQAP
Trigger: TGGAGCCTGAGACCTGCACAACAGCTCATGGTCATG...GTTTCTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CAA 90 bp GAAGAGTTGGATCCCAGCTCTTTGGAAGACAATCCTTCCTCCAGTGGTGAACTTCGCACACAGGAAGTCTaGGCAGTAAAGGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: EELDPSSLEDNPSSSGELRTQEV*AVKALL
Trigger: CAGCAAAGCCTTTACTGCCAAGACTTCCTGTGTGCG...AAGTTCACCACTGGAGGAAGGATTGTCTTCCAAAGAGCTGGGATCCAACTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CAA 90 bp CAAAACTGGTCACCTGAGGAGATACTCCTGGTCCTACATACAAATGACCTGCAGCGCACACAGGAAGTCTaGGCAGTAAAGGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: QNWSPEEILLVLHTNDLQRTQEV*AVKALL
Trigger: CAGCAAAGCCTTTACTGCCAAGACTTCCTGTGTGCG...CTGCAGGTCATTTGTATGTAGGACCAGGAGTATCTCCTCAGGTGACCAGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000582104.5
CDS-3UTR CAA 90 bp ACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACAAGGTGCCGAAGAAGGTaGACTTCCCAGGAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: TKCSRATAKTEASQDGDTRCRRR*TSQEVQ
Trigger: CTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACCT...TGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CAA 90 bp CACAAACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGGAAGTGCTGCAGACCTaGTCGTCGCTTCTCAATGAA +
Preference number: 5 (lower is better)
Translates to: HKQSALGLQQKLKPAKMGEVLQT*SSLLNE
Trigger: TTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTC...CCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGTTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CAA 90 bp GCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGACACGTGGAGGTTCCCTCTTaGGGTCTTCCAAAATCACAG +
Preference number: 5 (lower is better)
Translates to: AVMTDLCQSAQAEVTRRHVEVPS*GLPKSQ
Trigger: CTGTGATTTTGGAAGACCCAAAGAGGGAACCTCCAC...GTGTCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp ATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGAGATACTCCTGGTCCACATCTGCACAGTATTaGTTCCCATGGAAGAGGCAT +
Preference number: 5 (lower is better)
Translates to: ICHIRVPKTGHLRRYSWSTSAQY*FPWKRH
Trigger: ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGT...GGACCAGGAGTATCTCCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp GCTGTAATGACTGACCTCTGTCAATCAGCCCAAGCAGAGGTGACTAGAAGACACGGACAGAATGCCTCATaGTCTGAAGGAGAGCGTGTT +
Preference number: 5 (lower is better)
Translates to: AVMTDLCQSAQAEVTRRHGQNAS*SEGERV
Trigger: AACACGCTCTCCTTCAGACAATGAGGCATTCTGTCC...GTGTCTTCTAGTCACCTCTGCTTGGGCTGATTGACAGAGGTCAGTCATTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS CCA 90 bp CTCCTCCTGTTCTTGGTTCTCCGACATCCTACACCAAAAGCCCATTaGAAGGAAACATCTGATGAGGGACAGAGGATACAGGATCAAGGT +
Preference number: 5 (lower is better)
Translates to: LLLFLVLRHPTPKAH*KETSDEGQRIQDQG
Trigger: ACCTTGATCCTGTATCCTCTGTCCCTCATCAGATGTTTCCTTCCAATGGGCTTTTGGTGTAGGATGTCGGAGAACCAAGAACAGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582481.1
CDS-3UTR CAA 90 bp CTCAGATCCCAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCCTCCTACCCGATCTaGGAAGAAAGCAGCAACTCT +
Preference number: 5 (lower is better)
Translates to: LRSQESNIGFCSKATAPVSSYPI*EESSNS
Trigger: AGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGGA...CACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTGGGATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp GACCTTTTCAAGGAAGTGCTGCAGACCTTGTCGTCGCTTCTCAATGAACTCATCTCCTCCTACCCGATCTaGGAAGAAAGCAGCAACTCT +
Preference number: 5 (lower is better)
Translates to: DLFKEVLQTLSSLLNELISSYPI*EESSNS
Trigger: AGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGGA...GATGAGTTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTCCTTGAAAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581705.5
ENST00000583320.5
CDS-3UTR CAA 90 bp GAGGGGAAGGATCACACACACAAACCTAAGAGTAGAGCAATGCAGAATGCCTGTGTGGAGGTTCCCTCTTaGGGTCTTCCAAAATCACAG +
Preference number: 5 (lower is better)
Translates to: EGKDHTHKPKSRAMQNACVEVPS*GLPKSQ
Trigger: CTGTGATTTTGGAAGACCCAAAGAGGGAACCTCCAC...ACAGGCATTCTGCATTGCTCTACTCTTAGGTTTGTGTGTGTGATCCTTCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CAA 90 bp ACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGGCTGTCATGACCATGAGCTGTaGTGCAGGTCTCAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: TYKHLHSICSHGRGIRGCHDHEL*CRSQAP
Trigger: TGGAGCCTGAGACCTGCACAACAGCTCATGGTCATG...ACAGCCCCTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS GCA 90 bp TCTTTCCTCCTAAATCCCCTCTCCAACTTTTACCCACCTGTTCTCTaGAGACCATACTCTTACCTCCTGTTCTTGGTTCTCCGACATCCT +
Preference number: 5 (lower is better)
Translates to: SFLLNPLSNFYPPVL*RPYSYLLFLVLRHP
Trigger: AGGATGTCGGAGAACCAAGAACAGGAGGTAAGAGTATGGTCTGCAGAGAACAGGTGGGTAAAAGTTGGAGAGGGGATTTAGGAGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580875.1
CDS-3UTR CAA 90 bp CAGCAGCAGGAGTCACAGCACCAGTTCCATTCAGTGGTATCAGTGAAAGAAAAAGTGGAGGTTCCCTCTTaGGGTCTTCCAAAATCACAG +
Preference number: 5 (lower is better)
Translates to: QQQESQHQFHSVVSVKEKVEVPS*GLPKSQ
Trigger: CTGTGATTTTGGAAGACCCAAAGAGGGAACCTCCAC...TTTTTCTTTCACTGATACCACTGAATGGAACTGGTGCTGTGACTCCTGCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CAA 90 bp ATATGGCAGCTTAGAATTTGCCACATACGGGTCCCCAAAACTGGTCACCTGAGGACATCTGCACAGTATTaGTTCCCATGGAAGAGGCAT +
Preference number: 5 (lower is better)
Translates to: IWQLRICHIRVPKTGHLRTSAQY*FPWKRH
Trigger: ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGT...CCTCAGGTGACCAGTTTTGGGGACCCGTATGTGGCAAATTCTAAGCTGCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp ACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGGCTGTCTGAAGGAGAGCGTGTaGTTTCTCATCTCCATCCCC +
Preference number: 5 (lower is better)
Translates to: TYKHLHSICSHGRGIRGCLKESV*FLISIP
Trigger: GGGGATGGAGATGAGAAACAACACGCTCTCCTTCAG...ACAGCCCCTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS CCA 90 bp AATCACCTCCTGTTCTCTGCAGACCATACTCTTACCTCCTGTTCTTaGTTCTCCGACATCCTACACCAAAAGCCCATTGGAAGGAAACAT +
Preference number: 5 (lower is better)
Translates to: NHLLFSADHTLTSCS*FSDILHQKPIGRKH
Trigger: ATGTTTCCTTCCAATGGGCTTTTGGTGTAGGATGTCGGAGAACCAAGAACAGGAGGTAAGAGTATGGTCTGCAGAGAACAGGAGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578861.5
ENST00000580219.5
ENST00000582104.5
CDS CCA 90 bp TTTACCCACCTGTTCTCTGCAGACCATACTCTTACCTCCTGTTCTTaGTTCTCCGACATCCTACACCAAAAGCCCATTGGAAGGAAACAT +
Preference number: 5 (lower is better)
Translates to: FTHLFSADHTLTSCS*FSDILHQKPIGRKH
Trigger: ATGTTTCCTTCCAATGGGCTTTTGGTGTAGGATGTCGGAGAACCAAGAACAGGAGGTAAGAGTATGGTCTGCAGAGAACAGGTGGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580875.1
CDS-3UTR CAA 90 bp ACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGGCTGTTCCTCCTACCCGATCTaGGAAGAAAGCAGCAACTCT +
Preference number: 5 (lower is better)
Translates to: TYKHLHSICSHGRGIRGCSSYPI*EESSNS
Trigger: AGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGGA...ACAGCCCCTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp CATCTGCCTGTTGACAAACTTTATTTCTCTTTCAGCACCTGGCACCTCAGACAGTTGGCAGTAAAGGCTTaGCTGTTGGTATGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: HLPVDKLYFSFSTWHLRQLAVKA*LLVWRN
Trigger: ATTCCTCCATACCAACAGCAAAGCCTTTACTGCCAA...CTGTCTGAGGTGCCAGGTGCTGAAAGAGAAATAAAGTTTGTCAACAGGCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359238.7
ENST00000393405.6
CDS-3UTR CAA 90 bp CAGCAGCAGGAGTCACAGCACCAGTTCCATTCAGTGGTATCAGTGAAAGAAAAAACATCTGCACAGTATTaGTTCCCATGGAAGAGGCAT +
Preference number: 5 (lower is better)
Translates to: QQQESQHQFHSVVSVKEKTSAQY*FPWKRH
Trigger: ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGT...TTTTTCTTTCACTGATACCACTGAATGGAACTGGTGCTGTGACTCCTGCTGCTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
CDS-3UTR CAA 90 bp ACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGGGCTGTTCTTACCTCCTGTTCTaGGTTCTCCGACATCCTACA +
Preference number: 5 (lower is better)
Translates to: TYKHLHSICSHGRGIRGCSYLLF*VLRHPT
Trigger: TGTAGGATGTCGGAGAACCAAGAACAGGAGGTAAGA...ACAGCCCCTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580219.5
ENST00000582104.5
CDS-3UTR CAA 90 bp GTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACCTCCTCCTGTTCTaGGTTCTCCGACATCCTACA +
Preference number: 5 (lower is better)
Translates to: VLFKSNSPCVLCLTYKHLHLLLF*VLRHPT
Trigger: TGTAGGATGTCGGAGAACCAAGAACAGGAGGAGGTG...CAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000581705.5
CDS-3UTR CAA 90 bp GGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTCACCTCCTCCTGTTCTaGGTTCTCCGACATCCTACA +
Preference number: 5 (lower is better)
Translates to: GSVQKQQPLCLMFNLQTSHLLLF*VLRHPT
Trigger: TGTAGGATGTCGGAGAACCAAGAACAGGAGGAGGTG...AGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000581705.5
CDS-3UTR CAA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCGCACACAGGAAGTCTaGGCAGTAAAGGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFRTQEV*AVKALL
Trigger: CAGCAAAGCCTTTACTGCCAAGACTTCCTGTGTGCG...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000582104.5
CDS-3UTR CAA 90 bp CTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACGTGGAGGTTCCCTCTTaGGGTCTTCCAAAATCACAG +
Preference number: 5 (lower is better)
Translates to: LFKSNSPCVLCLTYKHLHVEVPS*GLPKSQ
Trigger: CTGTGATTTTGGAAGACCCAAAGAGGGAACCTCCAC...GTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCATTGGAAGGAAACATTaGGGACGCCGGAGAGTGCAC +
Preference number: 5 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFIGRKH*GRRRVH
Trigger: GTGCACTCTCCGGCGTCCCAAATGTTTCCTTCCAAT...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580219.5
CDS-3UTR CAA 90 bp TCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCAGAAGTGCTGCAGACCTaGTCGTCGCTTCTCAATGAA +
Preference number: 5 (lower is better)
Translates to: SVQKQQPLCLMFNLQTSAEVLQT*SSLLNE
Trigger: TTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTC...TGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp GGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTTCCTCCTACCCGATCTaGGAAGAAAGCAGCAACTCT +
Preference number: 5 (lower is better)
Translates to: GSVQKQQPLCLMFNLQTSSSYPI*EESSNS
Trigger: AGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGGA...AGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp TCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCAGTGGAGGTTCCCTCTTaGGGTCTTCCAAAATCACAG +
Preference number: 5 (lower is better)
Translates to: SVQKQQPLCLMFNLQTSAVEVPS*GLPKSQ
Trigger: CTGTGATTTTGGAAGACCCAAAGAGGGAACCTCCAC...TGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp GGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGTGGAGGTTCCCTCTTaGGGTCTTCCAAAATCACAG +
Preference number: 5 (lower is better)
Translates to: GSVQKQQPLCLMFNLQTSVEVPS*GLPKSQ
Trigger: CTGTGATTTTGGAAGACCCAAAGAGGGAACCTCCAC...AGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp CAGGAGAGTAATATAGGGTTCTGTTCAAAAGCAACAGCCCCTGTGTCTTATGTTACATCTGCACAGTATTaGTTCCCATGGAAGAGGCAT +
Preference number: 5 (lower is better)
Translates to: QESNIGFCSKATAPVSYVTSAQY*FPWKRH
Trigger: ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGT...AACATAAGACACAGGGGCTGTTGCTTTTGAACAGAACCCTATATTACTCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp ACAAAGTGCTCTAGGGCTACAGCAAAAACTGAAGCCAGCCAAGATGGGGATACACTTTGCATCTGCCTGTaGACAAACTTTATTTCTCTT +
Preference number: 5 (lower is better)
Translates to: TKCSRATAKTEASQDGDTLCICL*TNFISL
Trigger: AAGAGAAATAAAGTTTGTCAACAGGCAGATGCAAAG...TGTATCCCCATCTTGGCTGGCTTCAGTTTTTGCTGTAGCCCTAGAGCACTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR CAA 90 bp TTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGGTGCCGAAGAAGGTaGACTTCCCAGGAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: LCLTYKHLHSICSHGRGIRCRRR*TSQEVQ
Trigger: CTGAACTTCCTGGGAAGTCAACCTTCTTCGGCACCT...TATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp ATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATAAGTCCTCCTACCCGATCTaGGAAGAAAGCAGCAACTCT +
Preference number: 5 (lower is better)
Translates to: MFNLQTSAQYLFPWKRHKSSYPI*EESSNS
Trigger: AGAGTTGCTGCTTTCTTCCAAGATCGGGTAGGAGGA...CTTATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp CAACAGCCCCTGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCTCTTACCTCCTGTTCTaGGTTCTCCGACATCCTACA +
Preference number: 5 (lower is better)
Translates to: QQPLCLMFNLQTSAQYLFSYLLF*VLRHPT
Trigger: TGTAGGATGTCGGAGAACCAAGAACAGGAGGTAAGA...GAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACAGGGGCTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580219.5
ENST00000582104.5
CDS-3UTR CAA 90 bp TGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGAAGTGCTGCAGACCTaGTCGTCGCTTCTCAATGAA +
Preference number: 5 (lower is better)
Translates to: CVLCLTYKHLHSICSHGREVLQT*SSLLNE
Trigger: TTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTC...TCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp TGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAATACCAGCCAGGGCTTaGCATCTGCCTGTTGACAAA +
Preference number: 5 (lower is better)
Translates to: CVLCLTYKHLHSICSHGRIPARA*HLPVDK
Trigger: TTTGTCAACAGGCAGATGCAAAGCCCTGGCTGGTAT...TCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359238.7
CDS-3UTR CAA 90 bp CTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAGGCATACATCTGCACAGTATTaGTTCCCATGGAAGAGGCAT +
Preference number: 5 (lower is better)
Translates to: LMFNLQTSAQYLFPWKRHTSAQY*FPWKRH
Trigger: ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGT...ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS-3UTR CAA 90 bp TGTGTCTTATGTTTAACTTACAAACATCTGCACAGTATTTGTTCCCATGGAAGAACATCTGCACAGTATTaGTTCCCATGGAAGAGGCAT +
Preference number: 5 (lower is better)
Translates to: CVLCLTYKHLHSICSHGRTSAQY*FPWKRH
Trigger: ATGCCTCTTCCATGGGAACAAATACTGTGCAGATGT...TCTTCCATGGGAACAAATACTGTGCAGATGTTTGTAAGTTAAACATAAGACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000452859.6
ENST00000580219.5
ENST00000581705.5
ENST00000582104.5
CDS GCA 72 bp CGGCTTCTCCTTCCGGGTGAGTCGCCGGTGCCCCGGTaGACGACGGGAGACGCCCCAATCCCGGGTGCCCGG +
Preference number: 6 (lower is better)
Translates to: RLLLPGESPVPR*TTGDAPIPGAR
Trigger: CCGGGCACCCGGGATTGGGGCGTCTCCCGTCGTGCACCGGGGCACCGGCGACTCACCCGGAAGGAGAAGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000580875.1
ENST00000581705.5
ENST00000583320.5
CDS TCA 72 bp GTGCCCGGGACGCCCCGCCCCTACAGGCCCGGGCTCTaGGTGGGATTCCCGCTTCCGAATAGCGCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: VPGTPRPYRPGL*VGFPLPNSAAP
Trigger: CGGAGCCGCGCTATTCGGAAGCGGGAATCCCACTCAGAGCCCGGGCCTGTAGGGGCGGGGCGTCCCGGGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000580875.1
ENST00000581705.5
ENST00000583320.5
CDS CCA 72 bp CCGGGACGCCCCGCCCCTACAGGCCCGGGCTCTGAGTaGGATTCCCGCTTCCGAATAGCGCGGCTCCGCTGG +
Preference number: 6 (lower is better)
Translates to: PGRPAPTGPGSE*DSRFRIARLRW
Trigger: CCAGCGGAGCCGCGCTATTCGGAAGCGGGAATCCCACTCAGAGCCCGGGCCTGTAGGGGCGGGGCGTCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000580875.1
ENST00000581705.5
ENST00000583320.5
CDS GCA 72 bp CCAGATCACGGCTTCTCCTTCCGGGTGAGTCGCCGGTaGCCCGGTGCACGACGGGAGACGCCCCAATCCCGG +
Preference number: 6 (lower is better)
Translates to: PDHGFSFRVSRR*PGARRETPQSR
Trigger: CCGGGATTGGGGCGTCTCCCGTCGTGCACCGGGGCACCGGCGACTCACCCGGAAGGAGAAGCCGTGATCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000580875.1
ENST00000581705.5
ENST00000583320.5
CDS TCA 72 bp CCACCATATAGCCAGATCACGGCTTCTCCTTCCGGGTaGGTCGCCGGTGCCCCGGTGCACGACGGGAGACGC +
Preference number: 6 (lower is better)
Translates to: PPYSQITASPSG*VAGAPVHDGRR
Trigger: GCGTCTCCCGTCGTGCACCGGGGCACCGGCGACTCACCCGGAAGGAGAAGCCGTGATCTGGCTATATGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393405.6
ENST00000452859.6
ENST00000580875.1
ENST00000581705.5
ENST00000583320.5
CDS TCA 72 bp GAGTTCCAGGAGCCCTCATTCTGCACTCGGGGGTCCTaGACACGCACTGTAATCACCTCCTCCTGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: EFQEPSFCTRGS*TRTVITSSCSW
Trigger: CCAAGAACAGGAGGAGGTGATTACAGTGCGTGTTCAGGACCCCCGAGTGCAGAATGAGGGCTCCTGGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359238.7
ENST00000393405.6
ENST00000581298.5
ENST00000581705.5
ENST00000582481.1
ENST00000583320.5
ENST00000584335.5
CDS TCA 72 bp GAGTTCCAGGAGCCCTCATTCTGCACTCGGGGGTCCTaGACACGCACTGTAATCACCTCCTGTTCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: EFQEPSFCTRGS*TRTVITSCSLQ
Trigger: CTGCAGAGAACAGGAGGTGATTACAGTGCGTGTTCAGGACCCCCGAGTGCAGAATGAGGGCTCCTGGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578861.5
ENST00000580219.5
ENST00000582104.5
CDS CCA 72 bp TTCTTGGTTCTCCGACATCCTACACCAAAAGCCCATTaGAAGGAAACATCTGAGCAGGTTGCTGCTGCGGGC +
Preference number: 6 (lower is better)
Translates to: FLVLRHPTPKAH*KETSEQVAAAG
Trigger: GCCCGCAGCAGCAACCTGCTCAGATGTTTCCTTCCAATGGGCTTTTGGTGTAGGATGTCGGAGAACCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581298.5
CDS CAA 72 bp CCTGTTCTCTGCAGACCATACTCTTACCTCCTGTTCTaGGTTCTCCGACATCCTACACCAAAAGCCCATTGG +
Preference number: 6 (lower is better)
Translates to: PVLCRPYSYLLF*VLRHPTPKAHW
Trigger: CCAATGGGCTTTTGGTGTAGGATGTCGGAGAACCAAGAACAGGAGGTAAGAGTATGGTCTGCAGAGAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578861.5
ENST00000580219.5
ENST00000580875.1
ENST00000582104.5
CDS CCA 72 bp CTGTTCTCTGCAGACCATACTCTTACCTCCTGTTCTTaGTTCTCCGACATCCTACACCAAAAGCCCATTGGA +
Preference number: 6 (lower is better)
Translates to: LFSADHTLTSCS*FSDILHQKPIG
Trigger: TCCAATGGGCTTTTGGTGTAGGATGTCGGAGAACCAAGAACAGGAGGTAAGAGTATGGTCTGCAGAGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578861.5
ENST00000580219.5
ENST00000580875.1
ENST00000582104.5
CDS CAA 90 bp TTTTACCCACCTGTTCTCTGCAGACCATACTCTTACCTCCTGTTCTaGGTTCTCCGACATCCTACACCAAAAGCCCATTGGAAGGAAACA +
Preference number: 6 (lower is better)
Translates to: FYPPVLCRPYSYLLF*VLRHPTPKAHWKET
Trigger: TGTTTCCTTCCAATGGGCTTTTGGTGTAGGATGTCGGAGAACCAAGAACAGGAGGTAAGAGTATGGTCTGCAGAGAACAGGTGGGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580875.1
CDS CCA 72 bp TTCTTGGTTCTCCGACATCCTACACCAAAAGCCCATTaGAAGGAAACATCTGATGAGGGACAGAGGATACAG +
Preference number: 6 (lower is better)
Translates to: FLVLRHPTPKAH*KETSDEGQRIQ
Trigger: CTGTATCCTCTGTCCCTCATCAGATGTTTCCTTCCAATGGGCTTTTGGTGTAGGATGTCGGAGAACCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582481.1
CDS CAA 90 bp CTCATCAGAACCACCAAAGTAATACTGCAGGTAATAATTAATGATTaGCATCTCTATGTCCTCTTTCCTCCTAAATCCCCTCTCCAACTT +
Preference number: 6 (lower is better)
Translates to: LIRTTKVILQVIIND*HLYVLFPPKSPLQL
Trigger: AAGTTGGAGAGGGGATTTAGGAGGAAAGAGGACATAGAGATGCAAATCATTAATTATTACCTGCAGTATTACTTTGGTGGTTCTGATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580875.1
CDS CCA 72 bp AAAAGAAACAACATATTTCCCAATTTCCTTAGTGCCTaGTATGTTGCAAGTTCTCTTCATTGTCAACTCCAG +
Preference number: 6 (lower is better)
Translates to: KRNNIFPNFLSA*YVASSLHCQLQ
Trigger: CTGGAGTTGACAATGAAGAGAACTTGCAACATACCAGGCACTAAGGAAATTGGGAAATATGTTGTTTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577310.1