RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNUPN (Homo sapiens)

Ensembl gene IDs: ENSG00000169371

Ensembl transcript IDs: ENST00000308588.10, ENST00000563793.1, ENST00000564086.5, ENST00000564644.5, ENST00000564675.5, ENST00000567134.5, ENST00000567437.1, ENST00000568078.5, ENST00000568162.5, ENST00000569817.5

Found 276 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTTGGACGAGCTGTCCATTAAGGGCCCTTCCAGTGCCAGCATTCTaGCTTATCCAGCATGGGTGGAGCTCAGGCTCTGAAGGGCAGCAA +
Preference number: 1 (lower is better)
Translates to: SWTSCPLRALPVPAF*LIQHGWSSGSEGQQ
Trigger: TTGCTGCCCTTCAGAGCCTGAGCTCCACCCATGCTGGATAAGTCAGAATGCTGGCACTGGAAGGGCCCTTAATGGACAGCTCGTCCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
3UTR GCA 90 bp CTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATaGTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCAGCAT +
Preference number: 1 (lower is better)
Translates to: LGYTYHSRSCSNQSE*YAIWEPPHNCLSQH
Trigger: ATGCTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
3UTR GCA 90 bp TATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTaGTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCAT +
Preference number: 1 (lower is better)
Translates to: YIYIVDLGYTYHSRS*SNQSECYAIWEPPH
Trigger: ATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
3UTR-3UTR TCA 90 bp TTCCAGTGCCAGCATTCTGACTTATCCAGCATGGGTGGAGCTCAGGCTCTGAAGAGCTTTGTCCCATTCTaGTGCTTTGACACAGCACAA +
Preference number: 2 (lower is better)
Translates to: FQCQHSDLSSMGGAQALKSFVPF*CFDTAQ
Trigger: TTGTGCTGTGTCAAAGCATCAGAATGGGACAAAGCT...CTTCAGAGCCTGAGCTCCACCCATGCTGGATAAGTCAGAATGCTGGCACTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
3UTR-3UTR CCA 90 bp AGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACCCAGGTACCATCCTGTaGCTCCTTAAGGAGGCTTCT +
Preference number: 2 (lower is better)
Translates to: RSCSNQSECYAIWEPPHNPGTIL*LLKEAS
Trigger: AGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGG...GTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
3UTR-3UTR TCA 90 bp AGAGGCACACAAGAAGGATCTAGGCATGCAAGTCTTGCTCCTATCTGGGCCTCACCCATTCTGATGCTTTaGCACAGCACAATCAAGGAA +
Preference number: 2 (lower is better)
Translates to: RGTQEGSRHASLAPIWASPILML*HSTIKE
Trigger: TTCCTTGATTGTGCTGTGTCAAAGCATCAGAATGGG...TGAGGCCCAGATAGGAGCAAGACTTGCATGCCTAGATCCTTCTTGTGTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
3UTR-3UTR CCA 90 bp AATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCAGCCAGGTACCATCCTGTaGCTCCTTAAGGAGGCTTCT +
Preference number: 2 (lower is better)
Translates to: NQSECYAIWEPPHNCLSQPGTIL*LLKEAS
Trigger: AGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGG...CTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
3UTR-3UTR CCA 90 bp CTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCCAGGTACCATCCTGTaGCTCCTTAAGGAGGCTTCT +
Preference number: 2 (lower is better)
Translates to: LITVGAAQINLNATQSGNPGTIL*LLKEAS
Trigger: AGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGG...GTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
3UTR-3UTR CCA 90 bp GTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCCTCCAGGATTCCTTTTaGGGCCAGGTACCATCCTGT +
Preference number: 2 (lower is better)
Translates to: VDLGYTYHSRSCSNQSECLQDSF*GQVPSC
Trigger: ACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAG...GCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
3UTR-3UTR CCA 90 bp CACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCTGTTTCCAGCTGGACTaGGTTTGGAAAGTTCACTCT +
Preference number: 2 (lower is better)
Translates to: HSRSCSNQSECYAIWEPPCFQLD*VWKVHS
Trigger: AGAGTGAACTTTCCAAACCCAGTCCAGCTGGAAACA...GGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
3UTR-3UTR CCA 90 bp GATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACCTCCAGGATTCCTTTTaGGGCCAGGTACCATCCTGT +
Preference number: 2 (lower is better)
Translates to: DLGYTYHSRSCSNQSECYLQDSF*GQVPSC
Trigger: ACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAG...GTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
3UTR-3UTR CCA 90 bp CACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCAGCTGGACTGGGTTTaGAAAGTTCACTCTAAAGAA +
Preference number: 2 (lower is better)
Translates to: HSRSCSNQSECYAIWEPPQLDWV*KVHSKE
Trigger: TTCTTTAGAGTGAACTTTCCAAACCCAGTCCAGCTG...GGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
3UTR-3UTR CCA 90 bp GGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTCAGCTGGACTGGGTTTaGAAAGTTCACTCTAAAGAA +
Preference number: 2 (lower is better)
Translates to: GAAQINLNATQSGNLPITQLDWV*KVHSKE
Trigger: TTCTTTAGAGTGAACTTTCCAAACCCAGTCCAGCTG...AGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
3UTR-3UTR CCA 90 bp AGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTGTTTCCAGCTGGACTaGGTTTGGAAAGTTCACTCT +
Preference number: 2 (lower is better)
Translates to: SCSNQSECYAIWEPPHNCCFQLD*VWKVHS
Trigger: AGAGTGAACTTTCCAAACCCAGTCCAGCTGGAAACA...ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
3UTR-3UTR TCA 90 bp ATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCGTTCACTCTAAAGAATaGAGTCACCTGTTGTCACTG +
Preference number: 2 (lower is better)
Translates to: ITVGAAQINLNATQSGNLVHSKE*SHLLSL
Trigger: CAGTGACAACAGGTGACTTCATTCTTTAGAGTGAAC...GAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
3UTR-3UTR TCA 90 bp AATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCAGGTTCACTCTAAAGAATaGAGTCACCTGTTGTCACTG +
Preference number: 2 (lower is better)
Translates to: NQSECYAIWEPPHNCLSQVHSKE*SHLLSL
Trigger: CAGTGACAACAGGTGACTTCATTCTTTAGAGTGAAC...CTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
3UTR-3UTR CCA 90 bp ATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCGAATGCTACGCAATCTaGGAACCTCCCCATAACTGT +
Preference number: 2 (lower is better)
Translates to: IFTLWIWDTLITVGAAQIECYAI*EPPHNC
Trigger: ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTC...GATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
3UTR-3UTR CCA 90 bp ACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCATGTTTCCAGCTGGACTaGGTTTGGAAAGTTCACTCT +
Preference number: 2 (lower is better)
Translates to: TYIYIVDLGYTYHSRSCSCFQLD*VWKVHS
Trigger: AGAGTGAACTTTCCAAACCCAGTCCAGCTGGAAACA...TGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
3UTR TCA 72 bp AGCTGTCCATTAAGGGCCCTTCCAGTGCCAGCATTCTaGCTTATCCAGCATGGGTGGAGCTCAGGCTCTGAA +
Preference number: 3 (lower is better)
Translates to: SCPLRALPVPAF*LIQHGWSSGSE
Trigger: TTCAGAGCCTGAGCTCCACCCATGCTGGATAAGTCAGAATGCTGGCACTGGAAGGGCCCTTAATGGACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
3UTR-3UTR CAA 90 bp TGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGTCTCCAGGATTCCTTTaGGGGCCAGGTACCATCCTG +
Preference number: 3 (lower is better)
Translates to: CSNQSECYAIWEPPHNCLSPGFL*GPGTIL
Trigger: CAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA...CAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
3UTR CCA 72 bp AGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTaGGAACCTCCCCATAACTGTTTGAGCCAGCATTTC +
Preference number: 3 (lower is better)
Translates to: RSCSNQSECYAI*EPPHNCLSQHF
Trigger: GAAATGCTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
3UTR-3UTR CAA 90 bp ACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCATCTCCAGGATTCCTTTaGGGGCCAGGTACCATCCTG +
Preference number: 3 (lower is better)
Translates to: TYIYIVDLGYTYHSRSCSSPGFL*GPGTIL
Trigger: CAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA...TGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
3UTR GCA 72 bp ACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATaGTACGCAATCTGGGAACCTCCCCATAACTGTTTG +
Preference number: 3 (lower is better)
Translates to: TYHSRSCSNQSE*YAIWEPPHNCL
Trigger: CAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
3UTR GCA 72 bp ATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTaGTCAAATCAATCTGAATGCTACGCAATCTGGGAA +
Preference number: 3 (lower is better)
Translates to: IVDLGYTYHSRS*SNQSECYAIWE
Trigger: TTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR GCA 90 bp GTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCACAACGCCCGGCCCTaGTACCGGGCTCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: VTVLLSRIPFGARYHPVAHNARP*YRAPAP
Trigger: CGGGGCTGGAGCCCGGTAGCAGGGCCGGGCGTTGTG...AGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564644.5
CDS-3UTR TCA 90 bp GTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCCCACAGAAGTCCCTaGGGGGTCCTGGCCGGACAG +
Preference number: 4 (lower is better)
Translates to: VTVLLSRIPFGARYHPVAPHRSP*GVLAGQ
Trigger: CTGTCCGGCCAGGACCCCTCAGGGACTTCTGTGGGG...AGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000564644.5
ENST00000564675.5
CDS-3UTR GCA 90 bp TCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTCCCGGGGACGCTATCTaGTTCACTCGGCCGTGCGCG +
Preference number: 4 (lower is better)
Translates to: SPGFLLGPGTILWLLKEAPGDAI*FTRPCA
Trigger: CGCGCACGGCCGAGTGAAGCAGATAGCGTCCCCGGG...AGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564644.5
ENST00000564675.5
CDS-3UTR CCA 90 bp TGTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCCATAGTCTGGCTTGGTaGTCAGCGGGCCAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: CHCPPLQDSFWGQVPSCGHSLAW*SAGQPA
Trigger: TGCCGGCTGGCCCGCTGACCACCAAGCCAGACTATG...GCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp ACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTCAGCATAGTCTGGCTTaGTGGTCAGCGGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: TVLLSRIPFGARYHPVAPQHSLA*WSAGQP
Trigger: CGGCTGGCCCGCTGACCACCAAGCCAGACTATGCTG...AGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp GGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTCTCCAGCATAGTCTGGCTTaGTGGTCAGCGGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GFLLGPGTILWLLKEASLQHSLA*WSAGQP
Trigger: CGGCTGGCCCGCTGACCACCAAGCCAGACTATGCTG...GAGAGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp CCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTGTGCCCAGCATAGTCTaGCTTGGTGGTCAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: PGFLLGPGTILWLLKEASVPSIV*LGGQRA
Trigger: GGCCCGCTGACCACCAAGCCAGACTATGCTGGGCAC...AGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp GGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTCTCGTGCCCAGCATAGTCTaGCTTGGTGGTCAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GFLLGPGTILWLLKEASLVPSIV*LGGQRA
Trigger: GGCCCGCTGACCACCAAGCCAGACTATGCTGGGCAC...GAGAGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp ATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCGACCCCAAACCGAGGTaGCCGTCGCACGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: ITVGAAQINLNATQSGNLDPKPR*PSHAPP
Trigger: CGGCGGCGCGTGCGACGGTCACCTCGGTTTGGGGTC...GAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567134.5
CDS-3UTR GCA 90 bp CAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTCGGGTCATCTAGGCCATaGATGATTCGCCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: QDSFWGQVPSCGSLRRLLGSSRP*MIRPCP
Trigger: GGGGCAGGGGCGAATCATGCATGGCCTAGATGACCC...GAGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564644.5
ENST00000564675.5
CDS-3UTR CCA 90 bp AGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTCTGCTGCCTCACCGCTaGGCCCACAGGCCTCGCGCC +
Preference number: 4 (lower is better)
Translates to: SCSNQSECYAIWEPPHNCLLPHR*AHRPRA
Trigger: GGCGCGAGGCCTGTGGGCCCAGCGGTGAGGCAGCAG...ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567134.5
CDS-3UTR TCA 90 bp ACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTACACCAAGGACATCTaGCACCATGTAGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: TVLLSRIPFGARYHPVAPYTKDI*HHVGAQ
Trigger: CTGCGCCCCTACATGGTGTCAGATGTCCTTGGTGTA...AGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp ACCTGTTGTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTACACCAAGGACATCTaGCACCATGTAGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: TCCHCPPLQDSFWGQVPSYTKDI*HHVGAQ
Trigger: CTGCGCCCCTACATGGTGTCAGATGTCCTTGGTGTA...GGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGACAACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp CAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTCTACACCAAGGACATCTaGCACCATGTAGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: QDSFWGQVPSCGSLRRLLYTKDI*HHVGAQ
Trigger: CTGCGCCCCTACATGGTGTCAGATGTCCTTGGTGTA...GAGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp AGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTCCCCACAGAAGTCCCTaGGGGGTCCTGGCCGGACAG +
Preference number: 4 (lower is better)
Translates to: SCSNQSECYAIWEPPHNCPHRSP*GVLAGQ
Trigger: CTGTCCGGCCAGGACCCCTCAGGGACTTCTGTGGGG...ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564644.5
ENST00000564675.5
CDS-3UTR GCA 90 bp TGTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCGGTGTGGGGCAGCTGTaGTGTTCAGATCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: CHCPPLQDSFWGQVPSCGGVGQL*CSDLET
Trigger: TGTCTCAAGATCTGAACAGCACAGCTGCCCCACACC...GCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp CACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCAGCCCACCAAGGGAGTaGTTCCGGGGCTGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: HSRSCSNQSECYAIWEPPSPPRE*FRGCSG
Trigger: CCCACTACAGCCCCGGAAGCACTCCCTTGGTGGGCT...GGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp CACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCGCCACCGCCCCGCACTaGCTTTTTCTAGGCATGGGG +
Preference number: 4 (lower is better)
Translates to: HSRSCSNQSECYAIWEPPATAPH*LFLGMG
Trigger: CCCCATGCCTAGAAAAAGGCAGTGCGGGGCGGTGGC...GGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564644.5
ENST00000564675.5
CDS-3UTR GCA 90 bp GGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTCTTCCATCTTCCCCCTaGTACCGGGCTCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GAAQINLNATQSGNLPITLPSSP*YRAPAP
Trigger: CGGGGCTGGAGCCCGGTAGCAGGGGGAAGATGGAAG...AGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564675.5
CDS-3UTR CCA 90 bp CCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTGCATCCAGGGTGGTCTaGGCTATGGGAAGAACCCTT +
Preference number: 4 (lower is better)
Translates to: PGFLLGPGTILWLLKEASASRVV*AMGRTL
Trigger: AAGGGTTCTTCCCATAGCCCAGACCACCCTGGATGC...AGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp CAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTCGCATCCAGGGTGGTCTaGGCTATGGGAAGAACCCTT +
Preference number: 4 (lower is better)
Translates to: QDSFWGQVPSCGSLRRLLASRVV*AMGRTL
Trigger: AAGGGTTCTTCCCATAGCCCAGACCACCCTGGATGC...GAGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp ACCTGTTGTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCGCATCCAGGGTGGTCTaGGCTATGGGAAGAACCCTT +
Preference number: 4 (lower is better)
Translates to: TCCHCPPLQDSFWGQVPSASRVV*AMGRTL
Trigger: AAGGGTTCTTCCCATAGCCCAGACCACCCTGGATGC...GGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGACAACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp ACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTCCAGGTACCATCCTGTaGCTCCTTAAGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TVLLSRIPFGARYHPVAPPGTIL*LLKEAS
Trigger: AGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGG...AGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TGTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCCTTCAAGGCTGTTCTTaGCGGGTTCCTGCTGTTTCG +
Preference number: 4 (lower is better)
Translates to: CHCPPLQDSFWGQVPSCGLQGCS*RVPAVS
Trigger: CGAAACAGCAGGAACCCGCCAAGAACAGCCTTGAAG...GCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564644.5
CDS-3UTR CCA 90 bp TGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGGCAACTCGGCAGCTaGCGGGGCCCGGGCTCGAAC +
Preference number: 4 (lower is better)
Translates to: CSNQSECYAIWEPPHNCLRQLGS*RGPGSN
Trigger: GTTCGAGCCCGGGCCCCGCCAGCTGCCGAGTTGCCT...CAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564644.5
ENST00000564675.5
CDS-3UTR TCA 90 bp TGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTTTCCCCAAACCGAGGTaGCCGTCGCACGCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: WIWDTLITVGAAQINLNAFPKPR*PSHAPP
Trigger: CGGCGGCGCGTGCGACGGTCACCTCGGTTTGGGGAA...AGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308588.10
CDS-3UTR TCA 90 bp GTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCTCTTTAATTCTCCATaGGGCATCCAGGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VTVLLSRIPFGARYHPVALFNSP*GIQGGL
Trigger: CAGACCACCCTGGATGCCTCATGGAGAATTAAAGAG...AGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp TCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGGTGTGGGGCAGCTGTaGTGTTCAGATCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: SSSPGFLLGPGTILWLLKGVGQL*CSDLET
Trigger: TGTCTCAAGATCTGAACAGCACAGCTGCCCCACACC...CTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp TCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTAGCCGCTTGGATTTCTaGAGTTCCAGTAACCTCCGG +
Preference number: 4 (lower is better)
Translates to: SPGFLLGPGTILWLLKEASRLDF*SSSNLR
Trigger: CCGGAGGTTACTGGAACTGCAGAAATCCAAGCGGCT...AGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp CCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTAGCCGCTTGGATTTCTaGAGTTCCAGTAACCTCCGG +
Preference number: 4 (lower is better)
Translates to: PGFLLGPGTILWLLKEASSRLDF*SSSNLR
Trigger: CCGGAGGTTACTGGAACTGCAGAAATCCAAGCGGCT...AGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp ACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTACAGGCTTTCGGGAGTaGAAGGGAAGTTCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: TVLLSRIPFGARYHPVAPTGFRE*KGSSLA
Trigger: GGCTAAAGAACTTCCCTTGCACTCCCGAAAGCCTGT...AGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp GGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTAGCCCACCAAGGGAGTaGTTCCGGGGCTGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: GAAQINLNATQSGNLPITSPPRE*FRGCSG
Trigger: CCCACTACAGCCCCGGAAGCACTCCCTTGGTGGGCT...AGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp TCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGTTGTGCTCCATAATCTaGTGGAGCTGGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSSPGFLLGPGTILWLLKLCSII*WSWCPA
Trigger: TGCTGGGCACCAGCTCCAGCAGATTATGGAGCACAA...CTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCAGCATTTCCATAGTCTGGCTTGGTaGTCAGCGGGCCAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SECYAIWEPPHNCLSQHFHSLAW*SAGQPA
Trigger: TGCCGGCTGGCCCGCTGACCACCAAGCCAGACTATG...GAAATGCTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp GGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTGCCCAGCATAGTCTaGCTTGGTGGTCAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GAAQINLNATQSGNLPITVPSIV*LGGQRA
Trigger: GGCCCGCTGACCACCAAGCCAGACTATGCTGGGCAC...AGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTGGGTGGTCTGGGCTATaGGAAGAACCCTTCAACTTG +
Preference number: 4 (lower is better)
Translates to: SPGFLLGPGTILWLLKEAGWSGL*EEPFNL
Trigger: CAAGTTGAAGGGTTCTTCCCATAGCCCAGACCACCC...AGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTCCAGGTACCATCCTGTaGCTCCTTAAGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPGFLLGPGTILWLLKEAPGTIL*LLKEAS
Trigger: AGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGG...AGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp GGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTCTCCTCCAGGATTCCTTTTaGGGCCAGGTACCATCCTGT +
Preference number: 4 (lower is better)
Translates to: GFLLGPGTILWLLKEASLLQDSF*GQVPSC
Trigger: ACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAG...GAGAGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TCCATTAAGGGCCCTTCCAGTGCCAGCATTCTGACTTATCCAGCATGGGTGGAGCTTATCCAGCATGGGTaGAGCTCAGGCTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SIKGPSSASILTYPAWVELIQHG*SSGSEG
Trigger: CCCTTCAGAGCCTGAGCTCCACCCATGCTGGATAAG...CTCCACCCATGCTGGATAAGTCAGAATGCTGGCACTGGAAGGGCCCTTAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR TCA 90 bp ACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTGTGAAGAAAACCTGTTaGCACAGTAGCCACTCTTGG +
Preference number: 4 (lower is better)
Translates to: TVLLSRIPFGARYHPVAPVKKTC*HSSHSW
Trigger: CCAAGAGTGGCTACTGTGTCAACAGGTTTTCTTCAC...AGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp TCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTGTAGTCTTTTGCTGTTaGGTTTCGCCTGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPGFLLGPGTILWLLKEAVVFCC*VSPVAS
Trigger: GGAGGCAACAGGCGAAACTCAACAGCAAAAGACTAC...AGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp ACCTGTTGTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCGTAGTCTTTTGCTGTTaGGTTTCGCCTGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TCCHCPPLQDSFWGQVPSVVFCC*VSPVAS
Trigger: GGAGGCAACAGGCGAAACTCAACAGCAAAAGACTAC...GGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGACAACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp TCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGCTCTTTAATTCTCCATaGGGCATCCAGGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SSSPGFLLGPGTILWLLKLFNSP*GIQGGL
Trigger: CAGACCACCCTGGATGCCTCATGGAGAATTAAAGAG...CTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp GGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTCTCTTGAGTTTCGCCTGTTaGCTCCTGGCAGAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: GFLLGPGTILWLLKEASLLSFAC*LLAEVK
Trigger: CTTCACTTCTGCCAGGAGGCAACAGGCGAAACTCAA...GAGAGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp ACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTTCTGGCTCTTCTTGTaGTCCATAATCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TVLLSRIPFGARYHPVAPFWLFL*SIICWS
Trigger: GCTCCAGCAGATTATGGAGCACAAGAAGAGCCAGAA...AGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp AGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTGCCACCGCCCCGCACTaGCTTTTTCTAGGCATGGGG +
Preference number: 4 (lower is better)
Translates to: SCSNQSECYAIWEPPHNCATAPH*LFLGMG
Trigger: CCCCATGCCTAGAAAAAGGCAGTGCGGGGCGGTGGC...ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564644.5
ENST00000564675.5
CDS-3UTR GCA 90 bp TACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGCCCGGGGACGCTATCTaGTTCACTCGGCCGTGCGCG +
Preference number: 4 (lower is better)
Translates to: YTYHSRSCSNQSECYAIWPGDAI*FTRPCA
Trigger: CGCGCACGGCCGAGTGAAGCAGATAGCGTCCCCGGG...CCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564644.5
ENST00000564675.5
CDS-3UTR CCA 90 bp AGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTCATAGTCTGGCTTGGTaGTCAGCGGGCCAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SCSNQSECYAIWEPPHNCHSLAW*SAGQPA
Trigger: TGCCGGCTGGCCCGCTGACCACCAAGCCAGACTATG...ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp CAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTCGTGAAGAAAACCTGTTaGCACAGTAGCCACTCTTGG +
Preference number: 4 (lower is better)
Translates to: QDSFWGQVPSCGSLRRLLVKKTC*HSSHSW
Trigger: CCAAGAGTGGCTACTGTGTCAACAGGTTTTCTTCAC...GAGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp CACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCTACACCAAGGACATCTaGCACCATGTAGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: HSRSCSNQSECYAIWEPPYTKDI*HHVGAQ
Trigger: CTGCGCCCCTACATGGTGTCAGATGTCCTTGGTGTA...GGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp TTCCAGTGCCAGCATTCTGACTTATCCAGCATGGGTGGAGCTCAGGCTCTGAAGTTGAGTTTCGCCTGTTaGCTCCTGGCAGAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: FQCQHSDLSSMGGAQALKLSFAC*LLAEVK
Trigger: CTTCACTTCTGCCAGGAGGCAACAGGCGAAACTCAA...CTTCAGAGCCTGAGCTCCACCCATGCTGGATAAGTCAGAATGCTGGCACTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR GCA 90 bp TTCCAGTGCCAGCATTCTGACTTATCCAGCATGGGTGGAGCTCAGGCTCTGAAGACAGGCTTTCGGGAGTaGAAGGGAAGTTCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: FQCQHSDLSSMGGAQALKTGFRE*KGSSLA
Trigger: GGCTAAAGAACTTCCCTTGCACTCCCGAAAGCCTGT...CTTCAGAGCCTGAGCTCCACCCATGCTGGATAAGTCAGAATGCTGGCACTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR GCA 90 bp TGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCCACCAAGGGAGTaGTTCCGGGGCTGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: CSNQSECYAIWEPPHNCLSPPRE*FRGCSG
Trigger: CCCACTACAGCCCCGGAAGCACTCCCTTGGTGGGCT...CAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp ACCTGTTGTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTTCTGGCTCTTCTTGTaGTCCATAATCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TCCHCPPLQDSFWGQVPSFWLFL*SIICWS
Trigger: GCTCCAGCAGATTATGGAGCACAAGAAGAGCCAGAA...GGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGACAACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp GGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTTGCATGATTCGCCCCTaGCCCACAGAAGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GAAQINLNATQSGNLPITCMIRP*PTEVPE
Trigger: CTCAGGGACTTCTGTGGGGCAGGGGCGAATCATGCA...AGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564644.5
ENST00000564675.5
CDS-3UTR GCA 90 bp CTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACGGCCGACGAATCACCTaGCCTGGGAAGCTAGGTCCG +
Preference number: 4 (lower is better)
Translates to: LITVGAAQINLNATQSGNGRRIT*PGKLGP
Trigger: CGGACCTAGCTTCCCAGGGCAGGTGATTCGTCGGCC...GTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567134.5
CDS-3UTR CCA 90 bp TGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGCATAGTCTGGCTTGGTaGTCAGCGGGCCAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: CSNQSECYAIWEPPHNCLHSLAW*SAGQPA
Trigger: TGCCGGCTGGCCCGCTGACCACCAAGCCAGACTATG...CAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp ATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAGGCAACTCGGCAGCTaGCGGGGCCCGGGCTCGAAC +
Preference number: 4 (lower is better)
Translates to: IFTLWIWDTLITVGAAQIRQLGS*RGPGSN
Trigger: GTTCGAGCCCGGGCCCCGCCAGCTGCCGAGTTGCCT...GATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564644.5
CDS-3UTR TCA 90 bp GTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTGTTCACTCTAAAGAATaGAGTCACCTGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: VTVLLSRIPFGARYHPVAVHSKE*SHLLSL
Trigger: CAGTGACAACAGGTGACTTCATTCTTTAGAGTGAAC...AGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp GGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTCTCCTGCTCAAATCAATCTaGATGCTACGCAATCTGGGA +
Preference number: 4 (lower is better)
Translates to: GFLLGPGTILWLLKEASLLLKSI*MLRNLG
Trigger: TCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAG...GAGAGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp CAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTCCATAATCCAGCCGCTTaGATTTCTGCAGTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: QDSFWGQVPSCGSLRRLLHNPAA*ISAVPV
Trigger: TACTGGAACTGCAGAAATCCAAGCGGCTGGATTATG...GAGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTCTTCAGCCAGTCTTCTaGCATGGTTCACATAATCCA +
Preference number: 4 (lower is better)
Translates to: SPGFLLGPGTILWLLKEALQPVF*HGSHNP
Trigger: TGGATTATGTGAACCATGCCAGAAGACTGGCTGAAG...AGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp CACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCGGGTGGTCTGGGCTATaGGAAGAACCCTTCAACTTG +
Preference number: 4 (lower is better)
Translates to: HSRSCSNQSECYAIWEPPGWSGL*EEPFNL
Trigger: CAAGTTGAAGGGTTCTTCCCATAGCCCAGACCACCC...GGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCAGCATTTCGCATCCAGGGTGGTCTaGGCTATGGGAAGAACCCTT +
Preference number: 4 (lower is better)
Translates to: SECYAIWEPPHNCLSQHFASRVV*AMGRTL
Trigger: AAGGGTTCTTCCCATAGCCCAGACCACCCTGGATGC...GAAATGCTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGTGTTTCCAGCTGGACTaGGTTTGGAAAGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: SSSPGFLLGPGTILWLLKCFQLD*VWKVHS
Trigger: AGAGTGAACTTTCCAAACCCAGTCCAGCTGGAAACA...CTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp CAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTCCTCTTCCATCTTCCTTaGAAAAGAGCTAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: QDSFWGQVPSCGSLRRLLLFHLP*KRARMW
Trigger: CCACATCCTAGCTCTTTTCCAAGGAAGATGGAAGAG...GAGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567134.5
CDS-3UTR TCA 90 bp CACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCGCCTCCTGGCAGAAGTaGAGAAAACCTGTTGACACA +
Preference number: 4 (lower is better)
Translates to: HSRSCSNQSECYAIWEPPASWQK*RKPVDT
Trigger: TGTGTCAACAGGTTTTCTTCACTTCTGCCAGGAGGC...GGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp CACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCTCTTTAATTCTCCATaGGGCATCCAGGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: HSRSCSNQSECYAIWEPPLFNSP*GIQGGL
Trigger: CAGACCACCCTGGATGCCTCATGGAGAATTAAAGAG...GGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp ACCTGTTGTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCGTTCACTCTAAAGAATaGAGTCACCTGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: TCCHCPPLQDSFWGQVPSVHSKE*SHLLSL
Trigger: CAGTGACAACAGGTGACTTCATTCTTTAGAGTGAAC...GGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGACAACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp TCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTGTTCACTCTAAAGAATaGAGTCACCTGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: SPGFLLGPGTILWLLKEAVHSKE*SHLLSL
Trigger: CAGTGACAACAGGTGACTTCATTCTTTAGAGTGAAC...AGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp AGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATTTGTGCTCCATAATCTaGTGGAGCTGGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SRSCSNQSECYAIWEPPHLCSII*WSWCPA
Trigger: TGCTGGGCACCAGCTCCAGCAGATTATGGAGCACAA...ATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCAGCATTTCCCAGGTACCATCCTGTaGCTCCTTAAGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SECYAIWEPPHNCLSQHFPGTIL*LLKEAS
Trigger: AGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGG...GAAATGCTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCAGCATTTCCTCCAGGATTCCTTTTaGGGCCAGGTACCATCCTGT +
Preference number: 4 (lower is better)
Translates to: SECYAIWEPPHNCLSQHFLQDSF*GQVPSC
Trigger: ACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAG...GAAATGCTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTCAGCTGGACTGGGTTTaGAAAGTTCACTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: SPGFLLGPGTILWLLKEAQLDWV*KVHSKE
Trigger: TTCTTTAGAGTGAACTTTCCAAACCCAGTCCAGCTG...AGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGAATCACCTGCCCTaGGAAGCTAGGTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: WIWDTLITVGAAQINLNATNHLP*EARSAL
Trigger: GAGGGCGGACCTAGCTTCCCAGGGCAGGTGATTCGT...AGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567134.5
CDS-3UTR TCA 90 bp CACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCGTGAAGAAAACCTGTTaGCACAGTAGCCACTCTTGG +
Preference number: 4 (lower is better)
Translates to: HSRSCSNQSECYAIWEPPVKKTC*HSSHSW
Trigger: CCAAGAGTGGCTACTGTGTCAACAGGTTTTCTTCAC...GGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp AGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACGTAGTCTTTTGCTGTTaGGTTTCGCCTGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RSCSNQSECYAIWEPPHNVVFCC*VSPVAS
Trigger: GGAGGCAACAGGCGAAACTCAACAGCAAAAGACTAC...GTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp AAGTACATCCTTTCTCCAGAATCAGCTTTGTCCCATTCTGATGCTTTGACACAGGTGGAGCTCAGGCTCTaGAGGGCAGCAAGTACATCC +
Preference number: 4 (lower is better)
Translates to: KYILSPESALSHSDALTQVELRL*RAASTS
Trigger: GGATGTACTTGCTGCCCTTCAGAGCCTGAGCTCCAC...CTGTGTCAAAGCATCAGAATGGGACAAAGCTGATTCTGGAGAAAGGATGTACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR GCA 90 bp AGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTGGTGTGGGGCAGCTGTaGTGTTCAGATCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: SCSNQSECYAIWEPPHNCGVGQL*CSDLET
Trigger: TGTCTCAAGATCTGAACAGCACAGCTGCCCCACACC...ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp ATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCGGTGTGGGGCAGCTGTaGTGTTCAGATCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: ITVGAAQINLNATQSGNLGVGQL*CSDLET
Trigger: TGTCTCAAGATCTGAACAGCACAGCTGCCCCACACC...GAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp AGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATTTGAGTTTCGCCTGTTaGCTCCTGGCAGAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: SRSCSNQSECYAIWEPPHLSFAC*LLAEVK
Trigger: CTTCACTTCTGCCAGGAGGCAACAGGCGAAACTCAA...ATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp GGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTACAGGCTTTCGGGAGTaGAAGGGAAGTTCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: GAAQINLNATQSGNLPITTGFRE*KGSSLA
Trigger: GGCTAAAGAACTTCCCTTGCACTCCCGAAAGCCTGT...AGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp ATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAGCCCACCAAGGGAGTaGTTCCGGGGCTGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: IFTLWIWDTLITVGAAQISPPRE*FRGCSG
Trigger: CCCACTACAGCCCCGGAAGCACTCCCTTGGTGGGCT...GATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR GCA 90 bp TCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCAAATCAATCTGAATaGTACGCAATCTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: SPGFLLGPGTILWLLKEASNQSE*YAIWEP
Trigger: AGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGA...AGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp ACCTGTTGTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTATCACAGTAGGAGCTaGTCAAATCAATCTGAATGC +
Preference number: 4 (lower is better)
Translates to: TCCHCPPLQDSFWGQVPSYHSRS*SNQSEC
Trigger: GCATTCAGATTGATTTGAGCAGCTCCTACTGTGATA...GGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGACAACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TCACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAGCATAGTCTGGCTTaGTGGTCAGCGGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SHIFTLWIWDTLITVGAAQHSLA*WSAGQP
Trigger: CGGCTGGCCCGCTGACCACCAAGCCAGACTATGCTG...AGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR CCA 90 bp ATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCGTGCCCAGCATAGTCTaGCTTGGTGGTCAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: IFTLWIWDTLITVGAAQIVPSIV*LGGQRA
Trigger: GGCCCGCTGACCACCAAGCCAGACTATGCTGGGCAC...GATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR CCA 90 bp AGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTGGGTGGTCTGGGCTATaGGAAGAACCCTTCAACTTG +
Preference number: 4 (lower is better)
Translates to: SCSNQSECYAIWEPPHNCGWSGL*EEPFNL
Trigger: CAAGTTGAAGGGTTCTTCCCATAGCCCAGACCACCC...ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp TCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGTTTTGGTAACTTCTTaGCAGTGTCAATGTCCATTT +
Preference number: 4 (lower is better)
Translates to: SSSPGFLLGPGTILWLLKVLVTS*QCQCPF
Trigger: AAATGGACATTGACACTGTCAAGAAGTTACCAAAAC...CTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp ATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCGCCTCCTGGCAGAAGTaGAGAAAACCTGTTGACACA +
Preference number: 4 (lower is better)
Translates to: ITVGAAQINLNATQSGNLASWQK*RKPVDT
Trigger: TGTGTCAACAGGTTTTCTTCACTTCTGCCAGGAGGC...GAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp TCAGGCTCTGAAGGGCAGCAAGTACATCCTTTCTCCAGAATCAGCTTTGTCCCACCCATTCTGATGCTTTaGCACAGCACAATCAAGGAA +
Preference number: 4 (lower is better)
Translates to: SGSEGQQVHPFSRISFVPPILML*HSTIKE
Trigger: TTCCTTGATTGTGCTGTGTCAAAGCATCAGAATGGG...TGGGACAAAGCTGATTCTGGAGAAAGGATGTACTTGCTGCCCTTCAGAGCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR GCA 90 bp CTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACAGCCGCTTGGATTTCTaGAGTTCCAGTAACCTCCGG +
Preference number: 4 (lower is better)
Translates to: LITVGAAQINLNATQSGNSRLDF*SSSNLR
Trigger: CCGGAGGTTACTGGAACTGCAGAAATCCAAGCGGCT...GTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp ATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCTTGAGTTTCGCCTGTTaGCTCCTGGCAGAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: ITVGAAQINLNATQSGNLLSFAC*LLAEVK
Trigger: CTTCACTTCTGCCAGGAGGCAACAGGCGAAACTCAA...GAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp AGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTACAGGCTTTCGGGAGTaGAAGGGAAGTTCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: SCSNQSECYAIWEPPHNCTGFRE*KGSSLA
Trigger: GGCTAAAGAACTTCCCTTGCACTCCCGAAAGCCTGT...ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp AATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCAGACAGGCTTTCGGGAGTaGAAGGGAAGTTCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: NQSECYAIWEPPHNCLSQTGFRE*KGSSLA
Trigger: GGCTAAAGAACTTCCCTTGCACTCCCGAAAGCCTGT...CTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp TGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGTTGTGCTCCATAATCTaGTGGAGCTGGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CSNQSECYAIWEPPHNCLLCSII*WSWCPA
Trigger: TGCTGGGCACCAGCTCCAGCAGATTATGGAGCACAA...CAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp TCACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTGGGTCATCTAGGCCATaGATGATTCGCCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SHIFTLWIWDTLITVGAAGSSRP*MIRPCP
Trigger: GGGGCAGGGGCGAATCATGCATGGCCTAGATGACCC...AGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564644.5
CDS-3UTR GCA 90 bp TCCATTAAGGGCCCTTCCAGTGCCAGCATTCTGACTTATCCAGCATGGGTGGAGGTAACTAAGTCTCTCTaGAGCCTATCATCATGTCAA +
Preference number: 4 (lower is better)
Translates to: SIKGPSSASILTYPAWVEVTKSL*SLSSCQ
Trigger: TTGACATGATGATAGGCTGCAGAGAGACTTAGTTAC...CTCCACCCATGCTGGATAAGTCAGAATGCTGGCACTGGAAGGGCCCTTAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR CCA 90 bp AGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACCCAAGGAACTGTACTTaGACTTGTACTGGGATAGGC +
Preference number: 4 (lower is better)
Translates to: RSCSNQSECYAIWEPPHNPRNCT*TCTGIG
Trigger: GCCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGG...GTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp CTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCAGGATTCCTTTTaGGGCCAGGTACCATCCTGT +
Preference number: 4 (lower is better)
Translates to: LITVGAAQINLNATQSGNLQDSF*GQVPSC
Trigger: ACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAG...GTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp AGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATGAATGCTACGCAATCTaGGAACCTCCCCATAACTGT +
Preference number: 4 (lower is better)
Translates to: SRSCSNQSECYAIWEPPHECYAI*EPPHNC
Trigger: ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTC...ATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCAGCATTTCGAATGCTACGCAATCTaGGAACCTCCCCATAACTGT +
Preference number: 4 (lower is better)
Translates to: SECYAIWEPPHNCLSQHFECYAI*EPPHNC
Trigger: ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTC...GAAATGCTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TGTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTTTACATTGTGGATCTaGGATACACTTATCACAGTA +
Preference number: 4 (lower is better)
Translates to: CHCPPLQDSFWGQVPSCGFTLWI*DTLITV
Trigger: TACTGTGATAAGTGTATCCCAGATCCACAATGTAAA...GCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR TCA 90 bp GTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCGCCTCCTGGCAGAAGTaGAGAAAACCTGTTGACACA +
Preference number: 4 (lower is better)
Translates to: VDLGYTYHSRSCSNQSECASWQK*RKPVDT
Trigger: TGTGTCAACAGGTTTTCTTCACTTCTGCCAGGAGGC...GCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR TCA 90 bp TCTCCAGAATCAGCTTTGTCCCATTCTGATGCTTTGACACAGCACAATCAAGGAGTAGTCTTTTGCTGTTaGGTTTCGCCTGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPESALSHSDALTQHNQGVVFCC*VSPVAS
Trigger: GGAGGCAACAGGCGAAACTCAACAGCAAAAGACTAC...TCCTTGATTGTGCTGTGTCAAAGCATCAGAATGGGACAAAGCTGATTCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR TCA 90 bp GTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCCTCTTTAATTCTCCATaGGGCATCCAGGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VDLGYTYHSRSCSNQSECLFNSP*GIQGGL
Trigger: CAGACCACCCTGGATGCCTCATGGAGAATTAAAGAG...GCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR GCA 90 bp ACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCACGGCGGCGCTCACTCTaGTCCAAGGAACTGTACTTG +
Preference number: 4 (lower is better)
Translates to: TYIYIVDLGYTYHSRSCSRRRSL*SKELYL
Trigger: CAAGTACAGTTCCTTGGAGCAGAGTGAGCGCCGCCG...TGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR GCA 90 bp CTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACTTGAGTTTCGCCTGTTaGCTCCTGGCAGAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: LITVGAAQINLNATQSGNLSFAC*LLAEVK
Trigger: CTTCACTTCTGCCAGGAGGCAACAGGCGAAACTCAA...GTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp GATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACTTGTGCTCCATAATCTaGTGGAGCTGGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: DLGYTYHSRSCSNQSECYLCSII*WSWCPA
Trigger: TGCTGGGCACCAGCTCCAGCAGATTATGGAGCACAA...GTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR GCA 90 bp TCACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTTGCATGATTCGCCCCTaGCCCACAGAAGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SHIFTLWIWDTLITVGAACMIRP*PTEVPE
Trigger: CTCAGGGACTTCTGTGGGGCAGGGGCGAATCATGCA...AGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564644.5
CDS-3UTR CCA 90 bp TCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCAGCATTTCCTTCAGCCAGTCTTCTaGCATGGTTCACATAATCCA +
Preference number: 4 (lower is better)
Translates to: SECYAIWEPPHNCLSQHFLQPVF*HGSHNP
Trigger: TGGATTATGTGAACCATGCCAGAAGACTGGCTGAAG...GAAATGCTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp GATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGGGTGGTCTGGGCTATaGGAAGAACCCTTCAACTTG +
Preference number: 4 (lower is better)
Translates to: DLGYTYHSRSCSNQSECYGWSGL*EEPFNL
Trigger: CAAGTTGAAGGGTTCTTCCCATAGCCCAGACCACCC...GTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR CCA 90 bp AGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTCCAGCTGGACTaGGTTTGGAAAGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: RSCSNQSECYAIWEPPHNCFQLD*VWKVHS
Trigger: AGAGTGAACTTTCCAAACCCAGTCCAGCTGGAAACA...GTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp GGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTTGTTTCCAGCTGGACTaGGTTTGGAAAGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: GAAQINLNATQSGNLPITCFQLD*VWKVHS
Trigger: AGAGTGAACTTTCCAAACCCAGTCCAGCTGGAAACA...AGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp AGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTGAATGCTACGCAATCTaGGAACCTCCCCATAACTGT +
Preference number: 4 (lower is better)
Translates to: SCSNQSECYAIWEPPHNCECYAI*EPPHNC
Trigger: ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTC...ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTTTACATTGTGGATCTaGGATACACTTATCACAGTA +
Preference number: 4 (lower is better)
Translates to: SPGFLLGPGTILWLLKEAFTLWI*DTLITV
Trigger: TACTGTGATAAGTGTATCCCAGATCCACAATGTAAA...AGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACTTCCCACTTTAGGTaGACCCCAAACCGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: WIWDTLITVGAAQINLNATSHFR*TPNRGD
Trigger: GTCACCTCGGTTTGGGGTCCACCTAAAGTGGGAAGT...AGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567134.5
CDS-3UTR TCA 90 bp AGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACGTGCTGTTCAGATCTTaGGACACAGAAAAGCTACTA +
Preference number: 4 (lower is better)
Translates to: RSCSNQSECYAIWEPPHNVLFRS*DTEKLL
Trigger: TAGTAGCTTTTCTGTGTCTCAAGATCTGAACAGCAC...GTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp TCTCCAGAATCAGCTTTGTCCCATTCTGATGCTTTGACACAGCACAATCAAGGAGTGAAGAAAACCTGTTaGCACAGTAGCCACTCTTGG +
Preference number: 4 (lower is better)
Translates to: SPESALSHSDALTQHNQGVKKTC*HSSHSW
Trigger: CCAAGAGTGGCTACTGTGTCAACAGGTTTTCTTCAC...TCCTTGATTGTGCTGTGTCAAAGCATCAGAATGGGACAAAGCTGATTCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR TCA 90 bp AGCAAGTACATCCTTTCTCCAGAATCAGCTTTGTCCCATTCTGATGCTTTGACAGCCTCCTGGCAGAAGTaGAGAAAACCTGTTGACACA +
Preference number: 4 (lower is better)
Translates to: SKYILSPESALSHSDALTASWQK*RKPVDT
Trigger: TGTGTCAACAGGTTTTCTTCACTTCTGCCAGGAGGC...TGTCAAAGCATCAGAATGGGACAAAGCTGATTCTGGAGAAAGGATGTACTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR TCA 90 bp GATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGTAGTCTTTTGCTGTTaGGTTTCGCCTGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: DLGYTYHSRSCSNQSECYVVFCC*VSPVAS
Trigger: GGAGGCAACAGGCGAAACTCAACAGCAAAAGACTAC...GTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR TCA 90 bp ATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCTGCTCAAATCAATCTaGATGCTACGCAATCTGGGA +
Preference number: 4 (lower is better)
Translates to: ITVGAAQINLNATQSGNLLLKSI*MLRNLG
Trigger: TCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAG...GAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR GCA 90 bp CACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCTATCACAGTAGGAGCTaGTCAAATCAATCTGAATGC +
Preference number: 4 (lower is better)
Translates to: HSRSCSNQSECYAIWEPPYHSRS*SNQSEC
Trigger: GCATTCAGATTGATTTGAGCAGCTCCTACTGTGATA...GGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGCCAAGGAACTGTACTTaGACTTGTACTGGGATAGGC +
Preference number: 4 (lower is better)
Translates to: CSNQSECYAIWEPPHNCLPRNCT*TCTGIG
Trigger: GCCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGG...CAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp AGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTCTTCAGCCAGTCTTCTaGCATGGTTCACATAATCCA +
Preference number: 4 (lower is better)
Translates to: SCSNQSECYAIWEPPHNCLQPVF*HGSHNP
Trigger: TGGATTATGTGAACCATGCCAGAAGACTGGCTGAAG...ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp TACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGTGAAGAAAACCTGTTaGCACAGTAGCCACTCTTGG +
Preference number: 4 (lower is better)
Translates to: YTYHSRSCSNQSECYAIWVKKTC*HSSHSW
Trigger: CCAAGAGTGGCTACTGTGTCAACAGGTTTTCTTCAC...CCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp CTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTGCTCAAATCAATCTaGATGCTACGCAATCTGGGA +
Preference number: 4 (lower is better)
Translates to: LITVGAAQINLNATQSGNLLKSI*MLRNLG
Trigger: TCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAG...GTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp TACATCCTTTCTCCAGAATCAGCTTTGTCCCATTCTGATGCTTTGACACAGCACAGCTTTGTCCCATTCTaGTGCTTTGACACAGCACAA +
Preference number: 4 (lower is better)
Translates to: YILSPESALSHSDALTQHSFVPF*CFDTAQ
Trigger: TTGTGCTGTGTCAAAGCATCAGAATGGGACAAAGCT...GTGCTGTGTCAAAGCATCAGAATGGGACAAAGCTGATTCTGGAGAAAGGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR GCA 90 bp ATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAGCCGCTTGGATTTCTaGAGTTCCAGTAACCTCCGG +
Preference number: 4 (lower is better)
Translates to: IFTLWIWDTLITVGAAQISRLDF*SSSNLR
Trigger: CCGGAGGTTACTGGAACTGCAGAAATCCAAGCGGCT...GATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR GCA 90 bp AGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTATCACAGTAGGAGCTaGTCAAATCAATCTGAATGC +
Preference number: 4 (lower is better)
Translates to: RSCSNQSECYAIWEPPHNYHSRS*SNQSEC
Trigger: GCATTCAGATTGATTTGAGCAGCTCCTACTGTGATA...GTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp GATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACCCAAGGAACTGTACTTaGACTTGTACTGGGATAGGC +
Preference number: 4 (lower is better)
Translates to: DLGYTYHSRSCSNQSECYPRNCT*TCTGIG
Trigger: GCCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGG...GTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGCCAAGGAACTGTACTTaGACTTGTACTGGGATAGGC +
Preference number: 4 (lower is better)
Translates to: YTYHSRSCSNQSECYAIWPRNCT*TCTGIG
Trigger: GCCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGG...CCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp ACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCACCAGGTACCATCCTGTaGCTCCTTAAGGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TYIYIVDLGYTYHSRSCSPGTIL*LLKEAS
Trigger: AGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGG...TGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR CCA 90 bp ATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCAGCTGGACTGGGTTTaGAAAGTTCACTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: ITVGAAQINLNATQSGNLQLDWV*KVHSKE
Trigger: TTCTTTAGAGTGAACTTTCCAAACCCAGTCCAGCTG...GAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAATGCTACGCAATCTaGGAACCTCCCCATAACTGT +
Preference number: 4 (lower is better)
Translates to: YTYHSRSCSNQSECYAIWECYAI*EPPHNC
Trigger: ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTC...CCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp GTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCGTGCTGTTCAGATCTTaGGACACAGAAAAGCTACTA +
Preference number: 4 (lower is better)
Translates to: VDLGYTYHSRSCSNQSECVLFRS*DTEKLL
Trigger: TAGTAGCTTTTCTGTGTCTCAAGATCTGAACAGCAC...GCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR TCA 90 bp ATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCGCCTCCTGGCAGAAGTaGAGAAAACCTGTTGACACA +
Preference number: 4 (lower is better)
Translates to: IFTLWIWDTLITVGAAQIASWQK*RKPVDT
Trigger: TGTGTCAACAGGTTTTCTTCACTTCTGCCAGGAGGC...GATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR GCA 90 bp ATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCTATCACAGTAGGAGCTaGTCAAATCAATCTGAATGC +
Preference number: 4 (lower is better)
Translates to: ITVGAAQINLNATQSGNLYHSRS*SNQSEC
Trigger: GCATTCAGATTGATTTGAGCAGCTCCTACTGTGATA...GAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGCTTCAGCCAGTCTTCTaGCATGGTTCACATAATCCA +
Preference number: 4 (lower is better)
Translates to: YTYHSRSCSNQSECYAIWLQPVF*HGSHNP
Trigger: TGGATTATGTGAACCATGCCAGAAGACTGGCTGAAG...CCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CCA 90 bp TGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGCAGCTGGACTGGGTTTaGAAAGTTCACTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: CSNQSECYAIWEPPHNCLQLDWV*KVHSKE
Trigger: TTCTTTAGAGTGAACTTTCCAAACCCAGTCCAGCTG...CAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR TCA 90 bp CTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACAATGCTCCAGTAGTGTaGAGAACTTCCATAAAGTAC +
Preference number: 4 (lower is better)
Translates to: LITVGAAQINLNATQSGNNAPVV*RTSIKY
Trigger: GTACTTTATGGAAGTTCTTCACACTACTGGAGCATT...GTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567134.5
CDS-3UTR GCA 90 bp ACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCATTCTGGCTCTTCTTGTaGTCCATAATCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TYIYIVDLGYTYHSRSCSFWLFL*SIICWS
Trigger: GCTCCAGCAGATTATGGAGCACAAGAAGAGCCAGAA...TGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR CCA 90 bp GGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTTTTACATTGTGGATCTaGGATACACTTATCACAGTA +
Preference number: 4 (lower is better)
Translates to: GAAQINLNATQSGNLPITFTLWI*DTLITV
Trigger: TACTGTGATAAGTGTATCCCAGATCCACAATGTAAA...AGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR TCA 90 bp TCACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCTGCTCAAATCAATCTaGATGCTACGCAATCTGGGA +
Preference number: 4 (lower is better)
Translates to: SHIFTLWIWDTLITVGAALLKSI*MLRNLG
Trigger: TCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAG...AGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR GCA 90 bp TGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTTCAAATCAATCTGAATaGTACGCAATCTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: WIWDTLITVGAAQINLNASNQSE*YAIWEP
Trigger: AGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGA...AGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR TCA 90 bp ATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCGTGCTGTTCAGATCTTaGGACACAGAAAAGCTACTA +
Preference number: 4 (lower is better)
Translates to: IFTLWIWDTLITVGAAQIVLFRS*DTEKLL
Trigger: TAGTAGCTTTTCTGTGTCTCAAGATCTGAACAGCAC...GATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR TCA 90 bp TCACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTGTTCACTCTAAAGAATaGAGTCACCTGTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: SHIFTLWIWDTLITVGAAVHSKE*SHLLSL
Trigger: CAGTGACAACAGGTGACTTCATTCTTTAGAGTGAAC...AGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR GCA 90 bp ATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCTCAAATCAATCTGAATaGTACGCAATCTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: IFTLWIWDTLITVGAAQISNQSE*YAIWEP
Trigger: AGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGA...GATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR GCA 90 bp TCACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTTCAAATCAATCTGAATaGTACGCAATCTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: SHIFTLWIWDTLITVGAASNQSE*YAIWEP
Trigger: AGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGA...AGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS CCA 90 bp GGCCAGAGGGAGTCACAGTCCGGCACCGAGAGGCAACTCGGCAGCTaGCGGGGCCCGGGCTCGAACCCAGGGACTCACCCAAACCGAGGT +
Preference number: 5 (lower is better)
Translates to: GQRESQSGTERQLGS*RGPGSNPGTHPNRG
Trigger: ACCTCGGTTTGGGTGAGTCCCTGGGTTCGAGCCCGGGCCCCGCCAGCTGCCGAGTTGCCTCTCGGTGCCGGACTGTGACTCCCTCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564644.5
ENST00000564675.5
CDS GCA 90 bp GGGAGGAGGCTGATCTTGTGGCCGGGCATTCAACGCCCTGGGCCCTaGCGCCTCCCGCAGATCTTCCCGGGCCTTAGGGCTTCACCTGGA +
Preference number: 5 (lower is better)
Translates to: GRRLILWPGIQRPGP*RLPQIFPGLRASPG
Trigger: TCCAGGTGAAGCCCTAAGGCCCGGGAAGATCTGCGGGAGGCGGCAGGGCCCAGGGCGTTGAATGCCCGGCCACAAGATCAGCCTCCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS TCA 90 bp CTTGGTGGTCAGCGGGCCAGCCGGCACAGCTACACCAAGGACATCTaGCACCATGTAGGGGCGCAGCCAGCCCACCAAGGGAGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: LGGQRASRHSYTKDI*HHVGAQPAHQGSAS
Trigger: GGAAGCACTCCCTTGGTGGGCTGGCTGCGCCCCTACATGGTGTCAGATGTCCTTGGTGTAGCTGTGCCGGCTGGCCCGCTGACCACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
ENST00000567437.1
CDS TCA 90 bp CTGAACACAAGCTCTTCGGGGCTCCTTTCGCCAATGGGAGGAGGCTaGTCTTGTGGCCGGGCATTCAACGCCCTGGGCCCTGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: LNTSSSGLLSPMGGG*SCGRAFNALGPAAS
Trigger: GGAGGCGGCAGGGCCCAGGGCGTTGAATGCCCGGCCACAAGATCAGCCTCCTCCCATTGGCGAAAGGAGCCCCGAAGAGCTTGTGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS TCA 90 bp ACTCAACTCTTCCATCTTCCCGCTGGGCCCACAGGCCTCGCGCCCTaGGTTTCCGGCTCCTCCCTCCTTTGCGAACGCTGGGAGTTCCGT +
Preference number: 5 (lower is better)
Translates to: TQLFHLPAGPTGLAP*VSGSSLLCERWEFR
Trigger: ACGGAACTCCCAGCGTTCGCAAAGGAGGGAGGAGCCGGAAACTCAGGGCGCGAGGCCTGTGGGCCCAGCGGGAAGATGGAAGAGTTGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS CCA 90 bp GAGCCACTGCGCCCCGCCGGGCTCCTGCTGTTTCAACCCATTCCTTaGATGGTGCTGCCTCCAAGTGTTCGGACCTTAGCCCCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: EPLRPAGLLLFQPIP*MVLPPSVRTLAPGG
Trigger: ACCACCTGGGGCTAAGGTCCGAACACTTGGAGGCAGCACCATCCAAGGAATGGGTTGAAACAGCAGGAGCCCGGCGGGGCGCAGTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563793.1
CDS CCA 90 bp CCAGTAACCTCCGGCGGCGCTCACTCTGCTCCAAGGAACTGTACTTaGACTTGTACTGGGATAGGCGGGGGTGTGGGGCAGCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: PVTSGGAHSAPRNCT*TCTGIGGGVGQLCC
Trigger: ACAGCACAGCTGCCCCACACCCCCGCCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGGAGCAGAGTGAGCGCCGCCGGAGGTTACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308588.10
ENST00000563793.1
ENST00000564086.5
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
ENST00000568162.5
ENST00000569817.5
CDS TCA 90 bp GGACTCTTCCTGCTAGATGACTTGACCAGGCCGAGGCCTCCCTCCTaGACACAAGCTCTTCGGGGCTCCTTTCGCCAATGGGAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: GLFLLDDLTRPRPPS*TQALRGSFRQWEEA
Trigger: AGCCTCCTCCCATTGGCGAAAGGAGCCCCGAAGAGCTTGTGTTCAGGAGGGAGGCCTCGGCCTGGTCAAGTCATCTAGCAGGAAGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS CCA 90 bp CTTCTTGTGCTCCATAATCTGCTGGAGCTGGTGCCCAGCATAGTCTaGCTTGGTGGTCAGCGGGCCAGCCGGCACAGCTACACCAAGGAC +
Preference number: 5 (lower is better)
Translates to: LLVLHNLLELVPSIV*LGGQRASRHSYTKD
Trigger: GTCCTTGGTGTAGCTGTGCCGGCTGGCCCGCTGACCACCAAGCCAGACTATGCTGGGCACCAGCTCCAGCAGATTATGGAGCACAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS GCA 90 bp GGACATCTGACACCATGTAGGGGCGCAGCCAGCCCACCAAGGGAGTaGTTCCGGGGCTGTAGTGGGTCTGTTTGTGGTAGAAGAGAAGTC +
Preference number: 5 (lower is better)
Translates to: GHLTPCRGAASPPRE*FRGCSGSVCGRREV
Trigger: GACTTCTCTTCTACCACAAACAGACCCACTACAGCCCCGGAAGCACTCCCTTGGTGGGCTGGCTGCGCCCCTACATGGTGTCAGATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
ENST00000567437.1
CDS GCA 90 bp CGCTTGGATTTCTGCAGTTCCAGTAACCTCCGGCGGCGCTCACTCTaGTCCAAGGAACTGTACTTGGACTTGTACTGGGATAGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: RLDFCSSSNLRRRSL*SKELYLDLYWDRRG
Trigger: CCCCCGCCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGGAGCAGAGTGAGCGCCGCCGGAGGTTACTGGAACTGCAGAAATCCAAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308588.10
ENST00000563793.1
ENST00000564086.5
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
ENST00000568162.5
ENST00000569817.5
CDS CCA 90 bp TGGGAGTTCCGTTGCCTACAGGCCGTTATTTCCGCCTTCAACGGCTaGGGCATTTCCCATCGGCTAGGGAGGGGGTCTTCTTGCATTTGC +
Preference number: 5 (lower is better)
Translates to: WEFRCLQAVISAFNG*GISHRLGRGSSCIC
Trigger: GCAAATGCAAGAAGACCCCCTCCCTAGCCGATGGGAAATGCCCCAGCCGTTGAAGGCGGAAATAACGGCCTGTAGGCAACGGAACTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS-3UTR CAA 90 bp ACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTCTCCAGGATTCCTTTaGGGGCCAGGTACCATCCTG +
Preference number: 5 (lower is better)
Translates to: TVLLSRIPFGARYHPVAPSPGFL*GPGTIL
Trigger: CAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA...AGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTGAACTGTACTTGGACTaGTACTGGGATAGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: SPGFLLGPGTILWLLKEAELYLD*YWDRRG
Trigger: CCCCCGCCTATCCCAGTACAAGTCCAAGTACAGTTC...AGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS TCA 90 bp TCTTCTTGCATTTGCTTTGCACTGTCCGGGACTCTTCCTGCTAGATaGCTTGACCAGGCCGAGGCCTCCCTCCTGAACACAAGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: SSCICFALSGTLPAR*LDQAEASLLNTSSS
Trigger: CGAAGAGCTTGTGTTCAGGAGGGAGGCCTCGGCCTGGTCAAGTCATCTAGCAGGAAGAGTCCCGGACAGTGCAAAGCAAATGCAAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS-3UTR CAA 90 bp CCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTGTTGAGTTTCGCCTGTaGCCTCCTGGCAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: PGFLLGPGTILWLLKEASVEFRL*PPGRSE
Trigger: TTCACTTCTGCCAGGAGGCAACAGGCGAAACTCAAC...AGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGTTGAGTTTCGCCTGTaGCCTCCTGGCAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: SSSPGFLLGPGTILWLLKVEFRL*PPGRSE
Trigger: TTCACTTCTGCCAGGAGGCAACAGGCGAAACTCAAC...CTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp CCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTGAAGAACCCTTCAACTaGGGAGTAGACAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: PGFLLGPGTILWLLKEASEEPFN*GVDRCS
Trigger: GGAGCACCTGTCTACTCCCAAGTTGAAGGGTTCTTC...AGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TGTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCAAGGAACTGTACTaGGACTTGTACTGGGATAGG +
Preference number: 5 (lower is better)
Translates to: CHCPPLQDSFWGQVPSCGSKELY*DLYWDR
Trigger: CCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGGA...GCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp GTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTTGTAGTCTTTTGCTGTaGAGTTTCGCCTGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: VTVLLSRIPFGARYHPVACSLLL*SFACCL
Trigger: GAGGCAACAGGCGAAACTCAACAGCAAAAGACTACA...AGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS CCA 90 bp AGGAGGCTTCTCTCTTTAATTCTCCATGAGGCATCCAGGGTGGTCTaGGCTATGGGAAGAACCCTTCAACTTGGGAGTAGACAGGTGCTC +
Preference number: 5 (lower is better)
Translates to: RRLLSLILHEASRVV*AMGRTLQLGSRQVL
Trigger: GAGCACCTGTCTACTCCCAAGTTGAAGGGTTCTTCCCATAGCCCAGACCACCCTGGATGCCTCATGGAGAATTAAAGAGAGAAGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp CAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTCTCCAAGGAACTGTACTaGGACTTGTACTGGGATAGG +
Preference number: 5 (lower is better)
Translates to: QDSFWGQVPSCGSLRRLLSKELY*DLYWDR
Trigger: CCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGGA...GAGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TGTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCGAATGGTGTAGTCTTTaGCTGTTGAGTTTCGCCTGT +
Preference number: 5 (lower is better)
Translates to: CHCPPLQDSFWGQVPSCGEWCSL*LLSFAC
Trigger: ACAGGCGAAACTCAACAGCAAAAGACTACACCATTC...GCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp CACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCTCTCCAGGATTCCTTTaGGGGCCAGGTACCATCCTG +
Preference number: 5 (lower is better)
Translates to: HSRSCSNQSECYAIWEPPSPGFL*GPGTIL
Trigger: CAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA...GGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS TCA 90 bp ACCATCCTGTGGCTCCTTAAGGAGGCTTCTCTCTTTAATTCTCCATaGGGCATCCAGGGTGGTCTGGGCTATGGGAAGAACCCTTCAACT +
Preference number: 5 (lower is better)
Translates to: TILWLLKEASLFNSP*GIQGGLGYGKNPST
Trigger: AGTTGAAGGGTTCTTCCCATAGCCCAGACCACCCTGGATGCCTCATGGAGAATTAAAGAGAGAAGCCTCCTTAAGGAGCCACAGGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCAGCATTTCGAACTGTACTTGGACTaGTACTGGGATAGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: SECYAIWEPPHNCLSQHFELYLD*YWDRRG
Trigger: CCCCCGCCTATCCCAGTACAAGTCCAAGTACAGTTC...GAAATGCTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp CACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCGTTGAGTTTCGCCTGTaGCCTCCTGGCAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: HSRSCSNQSECYAIWEPPVEFRL*PPGRSE
Trigger: TTCACTTCTGCCAGGAGGCAACAGGCGAAACTCAAC...GGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAATGGTGTAGTCTTTaGCTGTTGAGTTTCGCCTGT +
Preference number: 5 (lower is better)
Translates to: SSSPGFLLGPGTILWLLKEWCSL*LLSFAC
Trigger: ACAGGCGAAACTCAACAGCAAAAGACTACACCATTC...CTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp CACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCGAAGAACCCTTCAACTaGGGAGTAGACAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: HSRSCSNQSECYAIWEPPEEPFN*GVDRCS
Trigger: GGAGCACCTGTCTACTCCCAAGTTGAAGGGTTCTTC...GGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TCCATTAAGGGCCCTTCCAGTGCCAGCATTCTGACTTATCCAGCATGGGTGGAGTGTAAGATGAGGGAGTaGGACGAGCTGTCCATTAAG +
Preference number: 5 (lower is better)
Translates to: SIKGPSSASILTYPAWVECKMRE*DELSIK
Trigger: CTTAATGGACAGCTCGTCCAACTCCCTCATCTTACA...CTCCACCCATGCTGGATAAGTCAGAATGCTGGCACTGGAAGGGCCCTTAATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR CAA 90 bp CCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTTGTGCTGTTCAGATCTaGAGACACAGAAAAGCTACT +
Preference number: 5 (lower is better)
Translates to: PGFLLGPGTILWLLKEASCAVQI*RHRKAT
Trigger: AGTAGCTTTTCTGTGTCTCAAGATCTGAACAGCACA...AGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp ATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCTTCAAGGCTGTTCTaGGCGGGTTCCTGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: ITVGAAQINLNATQSGNLPSRLF*AGSCCF
Trigger: GAAACAGCAGGAACCCGCCAAGAACAGCCTTGAAGG...GAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564644.5
CDS-3UTR CAA 90 bp TCCATTAAGGGCCCTTCCAGTGCCAGCATTCTGACTTATCCAGCATGGGTGGAGTCTCCAGAATCAGCTTaGTCCCATTCTGATGCTTTG +
Preference number: 5 (lower is better)
Translates to: SIKGPSSASILTYPAWVESPESA*SHSDAL
Trigger: CAAAGCATCAGAATGGGACAAAGCTGATTCTGGAGA...CTCCACCCATGCTGGATAAGTCAGAATGCTGGCACTGGAAGGGCCCTTAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR CAA 90 bp TGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGGAACTGTACTTGGACTaGTACTGGGATAGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: CSNQSECYAIWEPPHNCLELYLD*YWDRRG
Trigger: CCCCCGCCTATCCCAGTACAAGTCCAAGTACAGTTC...CAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TGTCACTGTCCTCCTCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCCTCAGAAAGCATCAATaGATTAGCATAGTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: CHCPPLQDSFWGQVPSCGLRKHQ*ISIVFW
Trigger: CCAAAACACTATGCTAATCAATTGATGCTTTCTGAG...GCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGAGGAGGACAGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp AGTTTCTCCATCTGTAAGATGAGGGAGTTGGACGAGCTGTCCATTAAGGGCCCTTGTAGTCTTTTGCTGTaGAGTTTCGCCTGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: SFSICKMRELDELSIKGPCSLLL*SFACCL
Trigger: GAGGCAACAGGCGAAACTCAACAGCAAAAGACTACA...AGGGCCCTTAATGGACAGCTCGTCCAACTCCCTCATCTTACAGATGGAGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR CAA 90 bp CTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACTCTCCAGGATTCCTTTaGGGGCCAGGTACCATCCTG +
Preference number: 5 (lower is better)
Translates to: LITVGAAQINLNATQSGNSPGFL*GPGTIL
Trigger: CAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA...GTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTGTTTTGGTAACTTCTaGACAGTGTCAATGTCCATT +
Preference number: 5 (lower is better)
Translates to: SPGFLLGPGTILWLLKEACFGNF*TVSMSI
Trigger: AATGGACATTGACACTGTCAAGAAGTTACCAAAACA...AGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp CAGGATTCCTTTTGGGGCCAGGTACCATCCTGTGGCTCCTTAAGGAGGCTTCTCCTCAGAAAGCATCAATaGATTAGCATAGTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: QDSFWGQVPSCGSLRRLLLRKHQ*ISIVFW
Trigger: CCAAAACACTATGCTAATCAATTGATGCTTTCTGAG...GAGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp AGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTAGTCTTTTGCTGTaGAGTTTCGCCTGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: RSCSNQSECYAIWEPPHNCSLLL*SFACCL
Trigger: GAGGCAACAGGCGAAACTCAACAGCAAAAGACTACA...GTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp AGTTTCTCCATCTGTAAGATGAGGGAGTTGGACGAGCTGTCCATTAAGGGCCCTGAATGGTGTAGTCTTTaGCTGTTGAGTTTCGCCTGT +
Preference number: 5 (lower is better)
Translates to: SFSICKMRELDELSIKGPEWCSL*LLSFAC
Trigger: ACAGGCGAAACTCAACAGCAAAAGACTACACCATTC...AGGGCCCTTAATGGACAGCTCGTCCAACTCCCTCATCTTACAGATGGAGAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR CAA 90 bp GCAGTAGGAAGAGGCACACAAGAAGGATCTAGGCATGCAAGTCTTGCTCCTATCTCCCATTCTGATGCTTaGACACAGCACAATCAAGGA +
Preference number: 5 (lower is better)
Translates to: AVGRGTQEGSRHASLAPISHSDA*TQHNQG
Trigger: TCCTTGATTGTGCTGTGTCAAAGCATCAGAATGGGA...GATAGGAGCAAGACTTGCATGCCTAGATCCTTCTTGTGTGCCTCTTCCTACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS GCA 90 bp ATAAGGGCTCTTTTTCCAACAGGGCACACGACCACAATCCATTCCTaGCCCAAATCTGAAGGAACGTCAATTAACCACTCAGAAAGCATC +
Preference number: 5 (lower is better)
Translates to: IRALFPTGHTTTIHS*PKSEGTSINHSESI
Trigger: GATGCTTTCTGAGTGGTTAATTGACGTTCCTTCAGATTTGGGGCAGGAATGGATTGTGGTCGTGTGCCCTGTTGGAAAAAGAGCCCTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000308588.10
ENST00000564086.5
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
ENST00000568078.5
ENST00000569817.5
CDS-3UTR CAA 90 bp TTCCAGTGCCAGCATTCTGACTTATCCAGCATGGGTGGAGCTCAGGCTCTGAAGCTCAGAAAGCATCAATaGATTAGCATAGTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: FQCQHSDLSSMGGAQALKLRKHQ*ISIVFW
Trigger: CCAAAACACTATGCTAATCAATTGATGCTTTCTGAG...CTTCAGAGCCTGAGCTCCACCCATGCTGGATAAGTCAGAATGCTGGCACTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR CAA 90 bp AAGTACATCCTTTCTCCAGAATCAGCTTTGTCCCATTCTGATGCTTTGACACAGGTTGAGTTTCGCCTGTaGCCTCCTGGCAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: KYILSPESALSHSDALTQVEFRL*PPGRSE
Trigger: TTCACTTCTGCCAGGAGGCAACAGGCGAAACTCAAC...CTGTGTCAAAGCATCAGAATGGGACAAAGCTGATTCTGGAGAAAGGATGTACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR CAA 90 bp AATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCAGTGTAGTCTTTTGCTGTaGAGTTTCGCCTGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: NQSECYAIWEPPHNCLSQCSLLL*SFACCL
Trigger: GAGGCAACAGGCGAAACTCAACAGCAAAAGACTACA...CTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp AGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATGAATGGTGTAGTCTTTaGCTGTTGAGTTTCGCCTGT +
Preference number: 5 (lower is better)
Translates to: SRSCSNQSECYAIWEPPHEWCSL*LLSFAC
Trigger: ACAGGCGAAACTCAACAGCAAAAGACTACACCATTC...ATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTGAAGAACCCTTCAACTaGGGAGTAGACAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: WIWDTLITVGAAQINLNAEEPFN*GVDRCS
Trigger: GGAGCACCTGTCTACTCCCAAGTTGAAGGGTTCTTC...AGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGTGTAGTCTTTTGCTGTaGAGTTTCGCCTGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: CSNQSECYAIWEPPHNCLCSLLL*SFACCL
Trigger: GAGGCAACAGGCGAAACTCAACAGCAAAAGACTACA...CAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TCAGGCTCTGAAGGGCAGCAAGTACATCCTTTCTCCAGAATCAGCTTTGTCCCACTTCTTCTGGTAACTTaGAATGCATCCAGTAGAATC +
Preference number: 5 (lower is better)
Translates to: SGSEGQQVHPFSRISFVPLLLVT*NASSRI
Trigger: GATTCTACTGGATGCATTCAAAGTTACCAGAAGAAG...TGGGACAAAGCTGATTCTGGAGAAAGGATGTACTTGCTGCCCTTCAGAGCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR CAA 90 bp AGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTGTGCTGTTCAGATCTaGAGACACAGAAAAGCTACT +
Preference number: 5 (lower is better)
Translates to: SCSNQSECYAIWEPPHNCCAVQI*RHRKAT
Trigger: AGTAGCTTTTCTGTGTCTCAAGATCTGAACAGCACA...ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTTCCAAGGAACTGTACTaGGACTTGTACTGGGATAGG +
Preference number: 5 (lower is better)
Translates to: WIWDTLITVGAAQINLNASKELY*DLYWDR
Trigger: CCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGGA...AGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR CAA 90 bp AGTTTCTCCATCTGTAAGATGAGGGAGTTGGACGAGCTGTCCATTAAGGGCCCTTGTTTTGGTAACTTCTaGACAGTGTCAATGTCCATT +
Preference number: 5 (lower is better)
Translates to: SFSICKMRELDELSIKGPCFGNF*TVSMSI
Trigger: AATGGACATTGACACTGTCAAGAAGTTACCAAAACA...AGGGCCCTTAATGGACAGCTCGTCCAACTCCCTCATCTTACAGATGGAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568078.5
CDS-3UTR CAA 90 bp ACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAGTTGAGTTTCGCCTGTaGCCTCCTGGCAGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: TYIYIVDLGYTYHSRSCSVEFRL*PPGRSE
Trigger: TTCACTTCTGCCAGGAGGCAACAGGCGAAACTCAAC...TGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR CAA 90 bp GTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCGAATGGTGTAGTCTTTaGCTGTTGAGTTTCGCCTGT +
Preference number: 5 (lower is better)
Translates to: VDLGYTYHSRSCSNQSECEWCSL*LLSFAC
Trigger: ACAGGCGAAACTCAACAGCAAAAGACTACACCATTC...GCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR CAA 90 bp AGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACCTTCTTCTGGTAACTTaGAATGCATCCAGTAGAATC +
Preference number: 5 (lower is better)
Translates to: RSCSNQSECYAIWEPPHNLLLVT*NASSRI
Trigger: GATTCTACTGGATGCATTCAAAGTTACCAGAAGAAG...GTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCAGCATTTCCTTCTTCTGGTAACTTaGAATGCATCCAGTAGAATC +
Preference number: 5 (lower is better)
Translates to: SECYAIWEPPHNCLSQHFLLLVT*NASSRI
Trigger: GATTCTACTGGATGCATTCAAAGTTACCAGAAGAAG...GAAATGCTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp ACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTCAGAAGAACCCTTCAACTaGGGAGTAGACAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: TYIYIVDLGYTYHSRSCSEEPFN*GVDRCS
Trigger: GGAGCACCTGTCTACTCCCAAGTTGAAGGGTTCTTC...TGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS TCA 90 bp GATGTGGAAGGCTGCTTAACAAGTAACGTCAATGCTCCAGTAGTGTaGAGAACTTCCATAAAGTACATTAGGGAAACAAGACAGGCATGG +
Preference number: 5 (lower is better)
Translates to: DVEGCLTSNVNAPVV*RTSIKYIRETRQAW
Trigger: CCATGCCTGTCTTGTTTCCCTAATGTACTTTATGGAAGTTCTTCACACTACTGGAGCATTGACGTTACTTGTTAAGCAGCCTTCCACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567134.5
ENST00000568162.5
CDS-3UTR CAA 90 bp AATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGAGCCAGCTTCTTCTGGTAACTTaGAATGCATCCAGTAGAATC +
Preference number: 5 (lower is better)
Translates to: NQSECYAIWEPPHNCLSQLLLVT*NASSRI
Trigger: GATTCTACTGGATGCATTCAAAGTTACCAGAAGAAG...CTGGCTCAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TCACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTTCCAAGGAACTGTACTaGGACTTGTACTGGGATAGG +
Preference number: 5 (lower is better)
Translates to: SHIFTLWIWDTLITVGAASKELY*DLYWDR
Trigger: CCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGGA...AGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR CAA 90 bp AGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTGTTTTGGTAACTTCTaGACAGTGTCAATGTCCATT +
Preference number: 5 (lower is better)
Translates to: SCSNQSECYAIWEPPHNCCFGNF*TVSMSI
Trigger: AATGGACATTGACACTGTCAAGAAGTTACCAAAACA...ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp ATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCTGTTTTGGTAACTTCTaGACAGTGTCAATGTCCATT +
Preference number: 5 (lower is better)
Translates to: ITVGAAQINLNATQSGNLCFGNF*TVSMSI
Trigger: AATGGACATTGACACTGTCAAGAAGTTACCAAAACA...GAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp AGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTCTCAGAAAGCATCAATaGATTAGCATAGTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: SCSNQSECYAIWEPPHNCLRKHQ*ISIVFW
Trigger: CCAAAACACTATGCTAATCAATTGATGCTTTCTGAG...ACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TGCTCAAATCAATCTGAATGCTACGCAATCTGGGAACCTCCCCATAACTGTTTGGGAGTAGATGTCATTTaGAAAACAGACTTCCCACTT +
Preference number: 5 (lower is better)
Translates to: CSNQSECYAIWEPPHNCLGVDVI*KTDFPL
Trigger: AAGTGGGAAGTCTGTTTTCAAAATGACATCTACTCC...CAAACAGTTATGGGGAGGTTCCCAGATTGCGTAGCATTCAGATTGATTTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567134.5
CDS-3UTR CAA 90 bp GATCTGGGATACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACCTTCTTCTGGTAACTTaGAATGCATCCAGTAGAATC +
Preference number: 5 (lower is better)
Translates to: DLGYTYHSRSCSNQSECYLLLVT*NASSRI
Trigger: GATTCTACTGGATGCATTCAAAGTTACCAGAAGAAG...GTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTATCCCAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TACACTTATCACAGTAGGAGCTGCTCAAATCAATCTGAATGCTACGCAATCTGGCTCAGAAAGCATCAATaGATTAGCATAGTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: YTYHSRSCSNQSECYAIWLRKHQ*ISIVFW
Trigger: CCAAAACACTATGCTAATCAATTGATGCTTTCTGAG...CCAGATTGCGTAGCATTCAGATTGATTTGAGCAGCTCCTACTGTGATAAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS-3UTR CAA 90 bp TCACATATATTTACATTGTGGATCTGGGATACACTTATCACAGTAGGAGCTGCTTGTTTTGGTAACTTCTaGACAGTGTCAATGTCCATT +
Preference number: 5 (lower is better)
Translates to: SHIFTLWIWDTLITVGAACFGNF*TVSMSI
Trigger: AATGGACATTGACACTGTCAAGAAGTTACCAAAACA...AGCAGCTCCTACTGTGATAAGTGTATCCCAGATCCACAATGTAAATATATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000567134.5
CDS CCA 72 bp GAGTCACAGTCCGGCACCGAGAGGCAACTCGGCAGCTaGCGGGGCCCGGGCTCGAACCCAGGGACTCACCCA +
Preference number: 6 (lower is better)
Translates to: ESQSGTERQLGS*RGPGSNPGTHP
Trigger: TGGGTGAGTCCCTGGGTTCGAGCCCGGGCCCCGCCAGCTGCCGAGTTGCCTCTCGGTGCCGGACTGTGACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564644.5
ENST00000564675.5
CDS GCA 72 bp CTGATCTTGTGGCCGGGCATTCAACGCCCTGGGCCCTaGCGCCTCCCGCAGATCTTCCCGGGCCTTAGGGCT +
Preference number: 6 (lower is better)
Translates to: LILWPGIQRPGP*RLPQIFPGLRA
Trigger: AGCCCTAAGGCCCGGGAAGATCTGCGGGAGGCGGCAGGGCCCAGGGCGTTGAATGCCCGGCCACAAGATCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS CCA 72 bp GGGGCTCCTTTCGCCAATGGGAGGAGGCTGATCTTGTaGCCGGGCATTCAACGCCCTGGGCCCTGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: GAPFANGRRLIL*PGIQRPGPCRL
Trigger: GAGGCGGCAGGGCCCAGGGCGTTGAATGCCCGGCCACAAGATCAGCCTCCTCCCATTGGCGAAAGGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS TCA 72 bp CAGCGGGCCAGCCGGCACAGCTACACCAAGGACATCTaGCACCATGTAGGGGCGCAGCCAGCCCACCAAGGG +
Preference number: 6 (lower is better)
Translates to: QRASRHSYTKDI*HHVGAQPAHQG
Trigger: CCCTTGGTGGGCTGGCTGCGCCCCTACATGGTGTCAGATGTCCTTGGTGTAGCTGTGCCGGCTGGCCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
ENST00000567437.1
CDS TCA 72 bp TTCCATCTTCCCGCTGGGCCCACAGGCCTCGCGCCCTaGGTTTCCGGCTCCTCCCTCCTTTGCGAACGCTGG +
Preference number: 6 (lower is better)
Translates to: FHLPAGPTGLAP*VSGSSLLCERW
Trigger: CCAGCGTTCGCAAAGGAGGGAGGAGCCGGAAACTCAGGGCGCGAGGCCTGTGGGCCCAGCGGGAAGATGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS CAA 72 bp AGGCCTCGCGCCCTGAGTTTCCGGCTCCTCCCTCCTTaGCGAACGCTGGGAGTTCCGTTGCCTACAGGCCGT +
Preference number: 6 (lower is better)
Translates to: RPRALSFRLLPP*RTLGVPLPTGR
Trigger: ACGGCCTGTAGGCAACGGAACTCCCAGCGTTCGCAAAGGAGGGAGGAGCCGGAAACTCAGGGCGCGAGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS CAA 90 bp TGGGCCCACAGGCCTCGCGCCCTGAGTTTCCGGCTCCTCCCTCCTTaGCGAACGCTGGGAGTTCCGTTGCCTACAGGCCGTTATTTCCGC +
Preference number: 6 (lower is better)
Translates to: WAHRPRALSFRLLPP*RTLGVPLPTGRYFR
Trigger: GCGGAAATAACGGCCTGTAGGCAACGGAACTCCCAGCGTTCGCAAAGGAGGGAGGAGCCGGAAACTCAGGGCGCGAGGCCTGTGGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS TCA 72 bp AGCTCTTCGGGGCTCCTTTCGCCAATGGGAGGAGGCTaGTCTTGTGGCCGGGCATTCAACGCCCTGGGCCCT +
Preference number: 6 (lower is better)
Translates to: SSSGLLSPMGGG*SCGRAFNALGP
Trigger: AGGGCCCAGGGCGTTGAATGCCCGGCCACAAGATCAGCCTCCTCCCATTGGCGAAAGGAGCCCCGAAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS CCA 72 bp TCTGCTGGAGCTGGTGCCCAGCATAGTCTGGCTTGGTaGTCAGCGGGCCAGCCGGCACAGCTACACCAAGGA +
Preference number: 6 (lower is better)
Translates to: SAGAGAQHSLAW*SAGQPAQLHQG
Trigger: TCCTTGGTGTAGCTGTGCCGGCTGGCCCGCTGACCACCAAGCCAGACTATGCTGGGCACCAGCTCCAGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
ENST00000567437.1
CDS CCA 72 bp TCCGGCGGCGCTCACTCTGCTCCAAGGAACTGTACTTaGACTTGTACTGGGATAGGCGGGGGTGTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: SGGAHSAPRNCT*TCTGIGGGVGQ
Trigger: CTGCCCCACACCCCCGCCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGGAGCAGAGTGAGCGCCGCCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308588.10
ENST00000563793.1
ENST00000564086.5
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
ENST00000568162.5
ENST00000569817.5
CDS CCA 72 bp CTCCATAATCTGCTGGAGCTGGTGCCCAGCATAGTCTaGCTTGGTGGTCAGCGGGCCAGCCGGCACAGCTAC +
Preference number: 6 (lower is better)
Translates to: LHNLLELVPSIV*LGGQRASRHSY
Trigger: GTAGCTGTGCCGGCTGGCCCGCTGACCACCAAGCCAGACTATGCTGGGCACCAGCTCCAGCAGATTATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
ENST00000567437.1
CDS CCA 72 bp GGCCTTAGGGCTTCACCTGGAGTCCCCTTCCCCTCTTaGGCCCGTGCTCTTAAACGGGCAGTGCCAATTGCC +
Preference number: 6 (lower is better)
Translates to: GLRASPGVPFPS*ARALKRAVPIA
Trigger: GGCAATTGGCACTGCCCGTTTAAGAGCACGGGCCCAAGAGGGGAAGGGGACTCCAGGTGAAGCCCTAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS CAA 72 bp CTCCGGCGGCGCTCACTCTGCTCCAAGGAACTGTACTaGGACTTGTACTGGGATAGGCGGGGGTGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: LRRRSLCSKELY*DLYWDRRGCGA
Trigger: TGCCCCACACCCCCGCCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGGAGCAGAGTGAGCGCCGCCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308588.10
ENST00000563793.1
ENST00000564086.5
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
ENST00000568162.5
ENST00000569817.5
CDS CAA 72 bp GCGCCCCGCCGGGCTCCTGCTGTTTCAACCCATTCCTaGGATGGTGCTGCCTCCAAGTGTTCGGACCTTAGC +
Preference number: 6 (lower is better)
Translates to: APRRAPAVSTHS*DGAASKCSDLS
Trigger: GCTAAGGTCCGAACACTTGGAGGCAGCACCATCCAAGGAATGGGTTGAAACAGCAGGAGCCCGGCGGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563793.1
CDS CAA 90 bp TCCAGTAACCTCCGGCGGCGCTCACTCTGCTCCAAGGAACTGTACTaGGACTTGTACTGGGATAGGCGGGGGTGTGGGGCAGCTGTGCTG +
Preference number: 6 (lower is better)
Translates to: SSNLRRRSLCSKELY*DLYWDRRGCGAAVL
Trigger: CAGCACAGCTGCCCCACACCCCCGCCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGGAGCAGAGTGAGCGCCGCCGGAGGTTACTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308588.10
ENST00000563793.1
ENST00000564086.5
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
ENST00000568162.5
ENST00000569817.5
CDS GCA 72 bp ACACCATGTAGGGGCGCAGCCAGCCCACCAAGGGAGTaGTTCCGGGGCTGTAGTGGGTCTGTTTGTGGTAGA +
Preference number: 6 (lower is better)
Translates to: TPCRGAASPPRE*FRGCSGSVCGR
Trigger: TCTACCACAAACAGACCCACTACAGCCCCGGAAGCACTCCCTTGGTGGGCTGGCTGCGCCCCTACATGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
ENST00000567437.1
CDS GCA 72 bp GGCTCCTCCCTCCTTTGCGAACGCTGGGAGTTCCGTTaGCTACAGGCCGTTATTTCCGCCTTCAACGGCTGG +
Preference number: 6 (lower is better)
Translates to: GSSLLCERWEFR*LQAVISAFNGW
Trigger: CCAGCCGTTGAAGGCGGAAATAACGGCCTGTAGGCAACGGAACTCCCAGCGTTCGCAAAGGAGGGAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS CAA 72 bp CGGCGCTCACTCTGCTCCAAGGAACTGTACTTGGACTaGTACTGGGATAGGCGGGGGTGTGGGGCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: RRSLCSKELYLD*YWDRRGCGAAV
Trigger: CACAGCTGCCCCACACCCCCGCCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGGAGCAGAGTGAGCGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308588.10
ENST00000563793.1
ENST00000564086.5
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
ENST00000568162.5
ENST00000569817.5
CDS CAA 72 bp CGGCTCCTCCCTCCTTTGCGAACGCTGGGAGTTCCGTaGCCTACAGGCCGTTATTTCCGCCTTCAACGGCTG +
Preference number: 6 (lower is better)
Translates to: RLLPPLRTLGVP*PTGRYFRLQRL
Trigger: CAGCCGTTGAAGGCGGAAATAACGGCCTGTAGGCAACGGAACTCCCAGCGTTCGCAAAGGAGGGAGGAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS TCA 72 bp CTGCTAGATGACTTGACCAGGCCGAGGCCTCCCTCCTaGACACAAGCTCTTCGGGGCTCCTTTCGCCAATGG +
Preference number: 6 (lower is better)
Translates to: LLDDLTRPRPPS*TQALRGSFRQW
Trigger: CCATTGGCGAAAGGAGCCCCGAAGAGCTTGTGTTCAGGAGGGAGGCCTCGGCCTGGTCAAGTCATCTAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS CCA 72 bp CGTTGCCTACAGGCCGTTATTTCCGCCTTCAACGGCTaGGGCATTTCCCATCGGCTAGGGAGGGGGTCTTCT +
Preference number: 6 (lower is better)
Translates to: RCLQAVISAFNG*GISHRLGRGSS
Trigger: AGAAGACCCCCTCCCTAGCCGATGGGAAATGCCCCAGCCGTTGAAGGCGGAAATAACGGCCTGTAGGCAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS CAA 90 bp CTGAGTTTCCGGCTCCTCCCTCCTTTGCGAACGCTGGGAGTTCCGTaGCCTACAGGCCGTTATTTCCGCCTTCAACGGCTGGGGCATTTC +
Preference number: 6 (lower is better)
Translates to: LSFRLLPPLRTLGVP*PTGRYFRLQRLGHF
Trigger: GAAATGCCCCAGCCGTTGAAGGCGGAAATAACGGCCTGTAGGCAACGGAACTCCCAGCGTTCGCAAAGGAGGGAGGAGCCGGAAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS CAA 72 bp CTGGGGCATTTCCCATCGGCTAGGGAGGGGGTCTTCTaGCATTTGCTTTGCACTGTCCGGGACTCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: LGHFPSAREGVF*HLLCTVRDSSC
Trigger: GCAGGAAGAGTCCCGGACAGTGCAAAGCAAATGCAAGAAGACCCCCTCCCTAGCCGATGGGAAATGCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS CAA 90 bp CAGGGCCTGACTCAACTCTTCCATCTTCCCTCGATTACTGCCTGTTaGCTGCTTTTGCGAGCTTCTTTCCCACTCGGCTGCGGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: QGLTQLFHLPSITAC*LLLRASFPLGCGLS
Trigger: GCTCAGCCCGCAGCCGAGTGGGAAAGAAGCTCGCAAAAGCAGCAAACAGGCAGTAATCGAGGGAAGATGGAAGAGTTGAGTCAGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564086.5
CDS GCA 72 bp TGGGGCATTTCCCATCGGCTAGGGAGGGGGTCTTCTTaGATTTGCTTTGCACTGTCCGGGACTCTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: WGISHRLGRGSS*ICFALSGTLPA
Trigger: AGCAGGAAGAGTCCCGGACAGTGCAAAGCAAATGCAAGAAGACCCCCTCCCTAGCCGATGGGAAATGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS TCA 72 bp ATTTGCTTTGCACTGTCCGGGACTCTTCCTGCTAGATaGCTTGACCAGGCCGAGGCCTCCCTCCTGAACACA +
Preference number: 6 (lower is better)
Translates to: ICFALSGTLPAR*LDQAEASLLNT
Trigger: TGTGTTCAGGAGGGAGGCCTCGGCCTGGTCAAGTCATCTAGCAGGAAGAGTCCCGGACAGTGCAAAGCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569817.5
CDS CAA 72 bp TTCCATCTTCCCTCGATTACTGCCTGTTTGCTGCTTTaGCGAGCTTCTTTCCCACTCGGCTGCGGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: FHLPSITACLLL*RASFPLGCGLS
Trigger: GCTCAGCCCGCAGCCGAGTGGGAAAGAAGCTCGCAAAAGCAGCAAACAGGCAGTAATCGAGGGAAGATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564086.5
CDS GCA 72 bp TTCTGCAGTTCCAGTAACCTCCGGCGGCGCTCACTCTaGTCCAAGGAACTGTACTTGGACTTGTACTGGGAT +
Preference number: 6 (lower is better)
Translates to: FCSSSNLRRRSL*SKELYLDLYWD
Trigger: ATCCCAGTACAAGTCCAAGTACAGTTCCTTGGAGCAGAGTGAGCGCCGCCGGAGGTTACTGGAACTGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308588.10
ENST00000563793.1
ENST00000564086.5
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
ENST00000568162.5
ENST00000569817.5
CDS CAA 90 bp ACTCAACTCTTCCATCTTCCCTCGATTACTGCCTGTTTGCTGCTTTaGCGAGCTTCTTTCCCACTCGGCTGCGGGCTGAGCAATGGTAGG +
Preference number: 6 (lower is better)
Translates to: TQLFHLPSITACLLL*RASFPLGCGLSNGR
Trigger: CCTACCATTGCTCAGCCCGCAGCCGAGTGGGAAAGAAGCTCGCAAAAGCAGCAAACAGGCAGTAATCGAGGGAAGATGGAAGAGTTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564086.5
CDS TCA 72 bp TGCTTTTGCGAGCTTCTTTCCCACTCGGCTGCGGGCTaGGCAATGGTAGGGACCTGGCTTGATTCCTATTTA +
Preference number: 6 (lower is better)
Translates to: CFCELLSHSAAG*AMVGTWLDSYL
Trigger: TAAATAGGAATCAAGCCAGGTCCCTACCATTGCTCAGCCCGCAGCCGAGTGGGAAAGAAGCTCGCAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564086.5
CDS GCA 72 bp CTCAACTCTTCCATCTTCCCTCGATTACTGCCTGTTTaGTGCTTTTGCGAGCTTCTTTCCCACTCGGCTGCG +
Preference number: 6 (lower is better)
Translates to: LNSSIFPRLLPV*CFCELLSHSAA
Trigger: CGCAGCCGAGTGGGAAAGAAGCTCGCAAAAGCAGCAAACAGGCAGTAATCGAGGGAAGATGGAAGAGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564086.5
CDS CAA 72 bp ACTCAACTCTTCCATCTTCCCTCGATTACTGCCTGTTaGCTGCTTTTGCGAGCTTCTTTCCCACTCGGCTGC +
Preference number: 6 (lower is better)
Translates to: TQLFHLPSITAC*LLLRASFPLGC
Trigger: GCAGCCGAGTGGGAAAGAAGCTCGCAAAAGCAGCAAACAGGCAGTAATCGAGGGAAGATGGAAGAGTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564086.5
CDS CCA 72 bp CTCTCTTTAATTCTCCATGAGGCATCCAGGGTGGTCTaGGCTATGGGAAGAACCCTTCAACTTGGGAGTAGA +
Preference number: 6 (lower is better)
Translates to: LSLILHEASRVV*AMGRTLQLGSR
Trigger: TCTACTCCCAAGTTGAAGGGTTCTTCCCATAGCCCAGACCACCCTGGATGCCTCATGGAGAATTAAAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS CCA 72 bp TCTCCAGGATTCCTTTTGGGGCCAGGTACCATCCTGTaGCTCCTTAAGGAGGCTTCTCTCTTTAATTCTCCA +
Preference number: 6 (lower is better)
Translates to: SPGFLLGPGTIL*LLKEASLFNSP
Trigger: TGGAGAATTAAAGAGAGAAGCCTCCTTAAGGAGCCACAGGATGGTACCTGGCCCCAAAAGGAATCCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308588.10
ENST00000564644.5
ENST00000564675.5
ENST00000567134.5
CDS TCA 72 bp GGCTGCTTAACAAGTAACGTCAATGCTCCAGTAGTGTaGAGAACTTCCATAAAGTACATTAGGGAAACAAGA +
Preference number: 6 (lower is better)
Translates to: GCLTSNVNAPVV*RTSIKYIRETR
Trigger: TCTTGTTTCCCTAATGTACTTTATGGAAGTTCTTCACACTACTGGAGCATTGACGTTACTTGTTAAGCAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567134.5
ENST00000568162.5