Pregenerated sensors for SNRPG (Homo sapiens)

Ensembl gene IDs: ENSG00000143977

Ensembl transcript IDs: ENST00000438261.5, ENST00000454893.1, ENST00000480370.1, ENST00000482975.6, ENST00000488400.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TATGCAACTAAAAAGGAGATGGAAAGTCTAATCTTGCCTGTTATTTaGCATTTCTGGGGGTTACTAACCAGGAAAGTTAATACACATTCC	+
Preference number: 5 (lower is better) Translates to: YATKKEMESLILPVI*HFWGLLTRKVNTHS Trigger: GGAATGTGTATTAACTTTCCTGGTTAGTAACCCCCAGAAATGGCAAATAACAGGCAAGATTAGACTTTCCATCTCCTTTTTAGTTGCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000480370.1
CDS TCA 90 bp	GTTAAGTCCACTCAAAAAGTATTTGAGGAATTCAAAGCTTTACGTTaGGTCCTACCTAAAGTAAGGCTCTCCTACTTAAAGTTGTTTGAC	+
Preference number: 5 (lower is better) Translates to: VKSTQKVFEEFKALR*VLPKVRLSYLKLFD Trigger: GTCAAACAACTTTAAGTAGGAGAGCCTTACTTTAGGTAGGACTCAACGTAAAGCTTTGAATTCCTCAAATACTTTTTGAGTGGACTTAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482975.6
CDS CCA 72 bp	GGGACCTGGAGACTAGTCGGCCGGAAGGAGGTGCCGTaGCTGCCGGCTGTAACCACACCGACGCGCGAGCTC	+
Preference number: 6 (lower is better) Translates to: GTWRLVGRKEVP*LPAVTTPTREL Trigger: GAGCTCGCGCGTCGGTGTGGTTACAGCCGGCAGCCACGGCACCTCCTTCCGGCCGACTAGTCTCCAGGTCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438261.5
CDS CAA 72 bp	CCGTATGCAACTAAAAAGGAGATGGAAAGTCTAATCTaGCCTGTTATTTGCCATTTCTGGGGGTTACTAACC	+
Preference number: 6 (lower is better) Translates to: PYATKKEMESLI*PVICHFWGLLT Trigger: GGTTAGTAACCCCCAGAAATGGCAAATAACAGGCAAGATTAGACTTTCCATCTCCTTTTTAGTTGCATACGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000480370.1
CDS CCA 72 bp	AAGTTGTCCTTTTTGGTTCACCTTTTTCAAGAACTTTaGGCTTACCGCTTTATTAGGTATGTTGTCCACCAT	+
Preference number: 6 (lower is better) Translates to: KLSFLVHLFQEL*AYRFIRYVVHH Trigger: ATGGTGGACAACATACCTAATAAAGCGGTAAGCCCAAAGTTCTTGAAAAAGGTGAACCAAAAAGGACAACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000454893.1
CDS CCA 72 bp	CTCAAACACCTACAAACACATTTGCTAAGACTAAAGTaGCTTTCGGATTCTGATGCCTCACGTAGTTTTAAA	+
Preference number: 6 (lower is better) Translates to: LKHLQTHLLRLK*LSDSDASRSFK Trigger: TTTAAAACTACGTGAGGCATCAGAATCCGAAAGCCACTTTAGTCTTAGCAAATGTGTTTGTAGGTGTTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482975.6
CDS GCA 72 bp	AAAAAGGAGATGGAAAGTCTAATCTTGCCTGTTATTTaGCATTTCTGGGGGTTACTAACCAGGAAAGTTAAT	+
Preference number: 6 (lower is better) Translates to: KKEMESLILPVI*HFWGLLTRKVN Trigger: ATTAACTTTCCTGGTTAGTAACCCCCAGAAATGGCAAATAACAGGCAAGATTAGACTTTCCATCTCCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000480370.1 ENST00000488400.1
CDS TCA 72 bp	ACTCAAAAAGTATTTGAGGAATTCAAAGCTTTACGTTaGGTCCTACCTAAAGTAAGGCTCTCCTACTTAAAG	+
Preference number: 6 (lower is better) Translates to: TQKVFEEFKALR*VLPKVRLSYLK Trigger: CTTTAAGTAGGAGAGCCTTACTTTAGGTAGGACTCAACGTAAAGCTTTGAATTCCTCAAATACTTTTTGAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482975.6
CDS CAA 72 bp	GAAACACATAACCTGTTAAGTCCACTCAAAAAGTATTaGAGGAATTCAAAGCTTTACGTTGAGTCCTACCTA	+
Preference number: 6 (lower is better) Translates to: ETHNLLSPLKKY*RNSKLYVESYL Trigger: TAGGTAGGACTCAACGTAAAGCTTTGAATTCCTCAAATACTTTTTGAGTGGACTTAACAGGTTATGTGTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000482975.6