Pregenerated sensors for SNRPD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000167088Ensembl transcript IDs: ENST00000300413.10, ENST00000582475.1
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCATACATCACTTTCCTTCTGTCCATAAATCTTCAACTATGCAGCTaGGCTGAAGCCTCTGAGCCTATTATGGTTCAGGGGCTACCTGAT | + |
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Preference number: 1 (lower is better) Translates to: PYITFLLSINLQLCS*AEASEPIMVQGLPD Trigger: ATCAGGTAGCCCCTGAACCATAATAGGCTCAGAGGCTTCAGCCCAGCTGCATAGTTGAAGATTTATGGACAGAAGGAAAGTGATGTATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR GCA 90 bp | TATAAGCTCCACGAGGACAGGAGCCAACTGTTTATTTCCTACTCTTaGAGGGTTTTGTTTGACCCCTTCAACAAATCTCTCCACTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: YKLHEDRSQLFISYS*RVLFDPFNKSLHLL Trigger: CAGCAAGTGGAGAGATTTGTTGAAGGGGTCAAACAAAACCCTGCAAGAGTAGGAAATAAACAGTTGGCTCCTGTCCTCGTGGAGCTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR TCA 90 bp | GATACAAGCAATAGGAGCACCAACAGGTCAGAAGATGGAAAAGAATaGAATCCAGTTATTTATTCCCCCAGCTTATTAATTAATGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: DTSNRSTNRSEDGKE*NPVIYSPSLLINER Trigger: CCTTTCATTAATTAATAAGCTGGGGGAATAAATAACTGGATTTCATTCTTTTCCATCTTCTGACCTGTTGGTGCTCCTATTGCTTGTATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCTTATTAATTAATGAAAGGTATAGGCCGGGGACGCACGGTGGCTCACGCACGCAGAGGTTGCAGTaGGCCAAGATCGCACCACTG | + |
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Preference number: 2 (lower is better) Translates to: PSLLINERYRPGTHGGSRTQRLQ*AKIAPL Trigger: CAGTGGTGCGATCTTGGCTCACTGCAACCTCTGCGT...GCGTGAGCCACCGTGCGTCCCCGGCCTATACCTTTCATTAATTAATAAGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR TCA 90 bp | AGGACAGGAGCCAACTGTTTATTTCCTACTCTTGCAGGGTTTTGTTTGACCCCTCTGGTCTTCAACTCCTaGCCTCGTGATCCACCTGCC | + |
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Preference number: 2 (lower is better) Translates to: RTGANCLFPTLAGFCLTPLVFNS*PRDPPA Trigger: GGCAGGTGGATCACGAGGTCAGGAGTTGAAGACCAG...AGGGGTCAAACAAAACCCTGCAAGAGTAGGAAATAAACAGTTGGCTCCTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR TCA 90 bp | GCAGGGACTACAAGTGTGCACCACGGCACTAAGCTCCAATTTTTATTTGTTATCAGGCAGAGCTTGCAGTaGGCCAAGATCGCGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: AGTTSVHHGTKLQFLFVIRQSLQ*AKIAPL Trigger: CAGTGGCGCGATCTTGGCTCACTGCAAGCTCTGCCT...GATAACAAATAAAAATTGGAGCTTAGTGCCGTGGTGCACACTTGTAGTCCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCTTATTAATTAATGAAAGGTATAGGCCGGGGACGCACGGTGGCTCACGCCCTCTGAGCCTATTATaGTTCAGGGGCTACCTGATT | + |
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Preference number: 2 (lower is better) Translates to: PSLLINERYRPGTHGGSRPLSLL*FRGYLI Trigger: AATCAGGTAGCCCCTGAACCATAATAGGCTCAGAGG...GCGTGAGCCACCGTGCGTCCCCGGCCTATACCTTTCATTAATTAATAAGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR TCA 90 bp | AAACTGTTACTAGACTGGCTTCACACTGCAAACATCCTAGACACAAAAACTCTCGGCAGGAGAATGGCCTaGACCCGGGAGGCAGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: KLLLDWLHTANILDTKTLGRRMA*TREAEL Trigger: AAGCTCTGCCTCCCGGGTTCAGGCCATTCTCCTGCC...GAGAGTTTTTGTGTCTAGGATGTTTGCAGTGTGAAGCCAGTCTAGTAACAGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR CCA 90 bp | ACAAATCTCTCCACTTGCTGCATTACAGGGGTCTCTTGCCTTTTGCCTTCTACTGGCCTCATGAGTAGCTaGGATTACAGGCGCCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: TNLSTCCITGVSCLLPSTGLMSS*DYRRLS Trigger: TGACAGGCGCCTGTAATCCCAGCTACTCATGAGGCC...AGTAGAAGGCAAAAGGCAAGAGACCCCTGTAATGCAGCAAGTGGAGAGATTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR GCA 90 bp | AAACTGTTACTAGACTGGCTTCACACTGCAAACATCCTAGACACAAAAACTCTCCCGGGACGCAGAGGTTaGAGTGAGCCAAGATCGCAC | + |
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Preference number: 2 (lower is better) Translates to: KLLLDWLHTANILDTKTLPGRRG*SEPRSH Trigger: GTGCGATCTTGGCTCACTGCAACCTCTGCGTCCCGG...GAGAGTTTTTGTGTCTAGGATGTTTGCAGTGTGAAGCCAGTCTAGTAACAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR CCA 90 bp | AGGACAGGAGCCAACTGTTTATTTCCTACTCTTGCAGGGTTTTGTTTGACCCCTGGGGTTTCACCCTCTTaGCCAAGCTGGTCTTCAACT | + |
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Preference number: 2 (lower is better) Translates to: RTGANCLFPTLAGFCLTPGVSPS*PSWSST Trigger: AGTTGAAGACCAGCTTGGCCAAGAGGGTGAAACCCC...AGGGGTCAAACAAAACCCTGCAAGAGTAGGAAATAAACAGTTGGCTCCTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR CAA 90 bp | TCAACAAATCTCTCCACTTGCTGCATTACAGGGGTCTCTTGCCTTTaGCCTTCTACTTGGATACAAGCAATAGGAGCACCAACAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: STNLSTCCITGVSCL*PSTWIQAIGAPTGQ Trigger: CTGACCTGTTGGTGCTCCTATTGCTTGTATCCAAGTAGAAGGCAAAAGGCAAGAGACCCCTGTAATGCAGCAAGTGGAGAGATTTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR CAA 90 bp | CACGAGGACAGGAGCCAACTGTTTATTTCCTACTCTTGCAGGGTTTaGTTTGACCCCTTCAACAAATCTCTCCACTTGCTGCATTACAGG | + |
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Preference number: 2 (lower is better) Translates to: HEDRSQLFISYSCRV*FDPFNKSLHLLHYR Trigger: CCTGTAATGCAGCAAGTGGAGAGATTTGTTGAAGGGGTCAAACAAAACCCTGCAAGAGTAGGAAATAAACAGTTGGCTCCTGTCCTCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCTTATTAATTAATGAAAGGTATAGGCCGGGGACGCACGGTGGCTCACGCAGCTTTACAAAGAACTaGTGCACTGAGAGACATTTT | + |
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Preference number: 2 (lower is better) Translates to: PSLLINERYRPGTHGGSRSFTKN*CTERHF Trigger: AAAATGTCTCTCAGTGCATCAGTTCTTTGTAAAGCT...GCGTGAGCCACCGTGCGTCCCCGGCCTATACCTTTCATTAATTAATAAGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR TCA 90 bp | AGGACAGGAGCCAACTGTTTATTTCCTACTCTTGCAGGGTTTTGTTTGACCCCTACTGTGGTAATTTCGTaGATGTGGAGGAAACTACTA | + |
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Preference number: 2 (lower is better) Translates to: RTGANCLFPTLAGFCLTPTVVIS*MWRKLL Trigger: TAGTAGTTTCCTCCACATTCACGAAATTACCACAGT...AGGGGTCAAACAAAACCCTGCAAGAGTAGGAAATAAACAGTTGGCTCCTGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR TCA 90 bp | AGGACAGGAGCCAACTGTTTATTTCCTACTCTTGCAGGGTTTTGTTTGACCCCTTGTAATACAACTGGGTaGCCACTGCCAATAATTTGT | + |
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Preference number: 2 (lower is better) Translates to: RTGANCLFPTLAGFCLTPCNTTG*PLPIIC Trigger: ACAAATTATTGGCAGTGGTCACCCAGTTGTATTACA...AGGGGTCAAACAAAACCCTGCAAGAGTAGGAAATAAACAGTTGGCTCCTGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTCAGAAGATGGAAAAGAATGAAATCCAGTTATTTATTCCCCCAGCTTATCTTCAACTATGCAGCTaGGCTGAAGCCTCTGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: TGQKMEKNEIQLFIPPAYLQLCS*AEASEP Trigger: AGGCTCAGAGGCTTCAGCCCAGCTGCATAGTTGAAG...ATAAGCTGGGGGAATAAATAACTGGATTTCATTCTTTTCCATCTTCTGACCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR CCA 90 bp | ACAAATCTCTCCACTTGCTGCATTACAGGGGTCTCTTGCCTTTTGCCTTCTACTGCCTGTCACTGCACCTaGCTAACTTTTGTATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: TNLSTCCITGVSCLLPSTACHCT*LTFVFL Trigger: TAAAAATACAAAAGTTAGCCAGGTGCAGTGACAGGC...AGTAGAAGGCAAAAGGCAAGAGACCCCTGTAATGCAGCAAGTGGAGAGATTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR GCA 90 bp | AAACTGTTACTAGACTGGCTTCACACTGCAAACATCCTAGACACAAAAACTCTCATTACAGGGGTCTCTTaGCTTTTGCCTTCTACTTGG | + |
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Preference number: 2 (lower is better) Translates to: KLLLDWLHTANILDTKTLITGVS*LLPSTW Trigger: CCAAGTAGAAGGCAAAAGGCAAGAGACCCCTGTAAT...GAGAGTTTTTGTGTCTAGGATGTTTGCAGTGTGAAGCCAGTCTAGTAACAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR GCA 90 bp | AAACTGTTACTAGACTGGCTTCACACTGCAAACATCCTAGACACAAAAACTCTCACAAATCTCTCCACTTaGTGCATTACAGGGGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: KLLLDWLHTANILDTKTLTNLST*CITGVS Trigger: AGAGACCCCTGTAATGCAGCAAGTGGAGAGATTTGT...GAGAGTTTTTGTGTCTAGGATGTTTGCAGTGTGAAGCCAGTCTAGTAACAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR CCA 90 bp | AAACTGTTACTAGACTGGCTTCACACTGCAAACATCCTAGACACAAAAACTCTCGTACCTAAGACTCCGTaGAGTAAAACTCAGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: KLLLDWLHTANILDTKTLVPKTP*SKTQER Trigger: CCTTTCCTGAGTTTTACTCCACGGAGTCTTAGGTAC...GAGAGTTTTTGTGTCTAGGATGTTTGCAGTGTGAAGCCAGTCTAGTAACAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR GCA 90 bp | AAACTGTTACTAGACTGGCTTCACACTGCAAACATCCTAGACACAAAAACTCTCATAAATCTTCAACTATaGAGCTGGGCTGAAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: KLLLDWLHTANILDTKTLINLQL*SWAEAS Trigger: AGAGGCTTCAGCCCAGCTGCATAGTTGAAGATTTAT...GAGAGTTTTTGTGTCTAGGATGTTTGCAGTGTGAAGCCAGTCTAGTAACAGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR TCA 90 bp | CTTTTTCTTCACCCAATTTTAGCCCTTTCACATGGAAATGAAATAATGACCTCTGGGCTACCTGATTTGTaGATTGTCCTTTGCTCAATT | + |
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Preference number: 2 (lower is better) Translates to: LFLHPILALSHGNEIMTSGLPDL*IVLCSI Trigger: AATTGAGCAAAGGACAATTCACAAATCAGGTAGCCC...AGAGGTCATTATTTCATTTCCATGTGAAAGGGCTAAAATTGGGTGAAGAAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR CAA 90 bp | GCAGGGACTACAAGTGTGCACCACGGCACTAAGCTCCAATTTTTATTTGTTATCTGTAATCCCAGCACATaGGGAGGCCTCGTGCAGATC | + |
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Preference number: 3 (lower is better) Translates to: AGTTSVHHGTKLQFLFVICNPST*GGLVQI Trigger: GATCTGCACGAGGCCTCCCAATGTGCTGGGATTACA...GATAACAAATAAAAATTGGAGCTTAGTGCCGTGGTGCACACTTGTAGTCCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR CAA 90 bp | AGGACAGGAGCCAACTGTTTATTTCCTACTCTTGCAGGGTTTTGTTTGACCCCTAACAAATCTCTCCACTaGCTGCATTACAGGGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: RTGANCLFPTLAGFCLTPNKSLH*LHYRGL Trigger: GAGACCCCTGTAATGCAGCAAGTGGAGAGATTTGTT...AGGGGTCAAACAAAACCCTGCAAGAGTAGGAAATAAACAGTTGGCTCCTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR CCA 72 bp | AACTATGCAGCTGGGCTGAAGCCTCTGAGCCTATTATaGTTCAGGGGCTACCTGATTTGTGAATTGTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: NYAAGLKPLSLL*FRGYLICELSF Trigger: AAAGGACAATTCACAAATCAGGTAGCCCCTGAACCATAATAGGCTCAGAGGCTTCAGCCCAGCTGCATAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR CCA 72 bp | ACTTTCCTTCTGTCCATAAATCTTCAACTATGCAGCTaGGCTGAAGCCTCTGAGCCTATTATGGTTCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: TFLLSINLQLCS*AEASEPIMVQG Trigger: CCCCTGAACCATAATAGGCTCAGAGGCTTCAGCCCAGCTGCATAGTTGAAGATTTATGGACAGAAGGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR CAA 90 bp | GCAGGGACTACAAGTGTGCACCACGGCACTAAGCTCCAATTTTTATTTGTTATCCATTACAGGGGTCTCTaGCCTTTTGCCTTCTACTTG | + |
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Preference number: 3 (lower is better) Translates to: AGTTSVHHGTKLQFLFVIHYRGL*PFAFYL Trigger: CAAGTAGAAGGCAAAAGGCAAGAGACCCCTGTAATG...GATAACAAATAAAAATTGGAGCTTAGTGCCGTGGTGCACACTTGTAGTCCCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR CAA 90 bp | ACAGGTCAGAAGATGGAAAAGAATGAAATCCAGTTATTTATTCCCCCAGCTTATTGGGGTTTCACCCTCTaGGCCAAGCTGGTCTTCAAC | + |
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Preference number: 3 (lower is better) Translates to: TGQKMEKNEIQLFIPPAYWGFTL*AKLVFN Trigger: GTTGAAGACCAGCTTGGCCAAGAGGGTGAAACCCCA...ATAAGCTGGGGGAATAAATAACTGGATTTCATTCTTTTCCATCTTCTGACCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR CAA 90 bp | GCAGGGACTACAAGTGTGCACCACGGCACTAAGCTCCAATTTTTATTTGTTATCCTTGCAGGGTTTTGTTaGACCCCTTCAACAAATCTC | + |
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Preference number: 3 (lower is better) Translates to: AGTTSVHHGTKLQFLFVILAGFC*TPSTNL Trigger: GAGATTTGTTGAAGGGGTCAAACAAAACCCTGCAAG...GATAACAAATAAAAATTGGAGCTTAGTGCCGTGGTGCACACTTGTAGTCCCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR GCA 72 bp | ACAAATCTCTCCACTTGCTGCATTACAGGGGTCTCTTaGCTTTTGCCTTCTACTTGGATACAAGCAATAGGA | + |
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Preference number: 3 (lower is better) Translates to: TNLSTCCITGVS*LLPSTWIQAIG Trigger: TCCTATTGCTTGTATCCAAGTAGAAGGCAAAAGGCAAGAGACCCCTGTAATGCAGCAAGTGGAGAGATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR GCA 72 bp | TACATCACTTTCCTTCTGTCCATAAATCTTCAACTATaGAGCTGGGCTGAAGCCTCTGAGCCTATTATGGTT | + |
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Preference number: 3 (lower is better) Translates to: YITFLLSINLQL*SWAEASEPIMV Trigger: AACCATAATAGGCTCAGAGGCTTCAGCCCAGCTGCATAGTTGAAGATTTATGGACAGAAGGAAAGTGATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR CAA 90 bp | CTTTTTCTTCACCCAATTTTAGCCCTTTCACATGGAAATGAAATAATGACCTCTAGGCACAATAATCTCTaGAACCCGGGACGCAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: LFLHPILALSHGNEIMTSRHNNL*NPGRRG Trigger: ACCTCTGCGTCCCGGGTTCAAGAGATTATTGTGCCT...AGAGGTCATTATTTCATTTCCATGTGAAAGGGCTAAAATTGGGTGAAGAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR-3UTR CAA 90 bp | CTTTTTCTTCACCCAATTTTAGCCCTTTCACATGGAAATGAAATAATGACCTCTCATATTGGTTGTATCTaGTCAAGCCAACTCACCTTT | + |
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Preference number: 3 (lower is better) Translates to: LFLHPILALSHGNEIMTSHIGCI*SSQLTF Trigger: AAAGGTGAGTTGGCTTGACAAGATACAACCAATATG...AGAGGTCATTATTTCATTTCCATGTGAAAGGGCTAAAATTGGGTGAAGAAAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR TCA 72 bp | AATAGGAGCACCAACAGGTCAGAAGATGGAAAAGAATaGAATCCAGTTATTTATTCCCCCAGCTTATTAATT | + |
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Preference number: 3 (lower is better) Translates to: NRSTNRSEDGKE*NPVIYSPSLLI Trigger: AATTAATAAGCTGGGGGAATAAATAACTGGATTTCATTCTTTTCCATCTTCTGACCTGTTGGTGCTCCTATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR TCA 90 bp | ACAAATCTCTCCACTTGCTGCATTACAGGGGTCTCTTGCCTTTTGCCTTCTACTGGCAGGAGAATGGCCTaGACCCGGGAGGCAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: TNLSTCCITGVSCLLPSTGRRMA*TREAEL Trigger: AAGCTCTGCCTCCCGGGTTCAGGCCATTCTCCTGCC...AGTAGAAGGCAAAAGGCAAGAGACCCCTGTAATGCAGCAAGTGGAGAGATTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CCA 90 bp | AACTGCCCAGTAGAAATGCTTAGCTCTCACTGTGGTAATTTCGTGAATGTGGAGGGCGCCGTCACCCTCTaGGTCCGACAGCACACAGAA | + |
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Preference number: 4 (lower is better) Translates to: NCPVEMLSSHCGNFVNVEGAVTL*VRQHTE Trigger: TTCTGTGTGCTGTCGGACCCAGAGGGTGACGGCGCC...CTCCACATTCACGAAATTACCACAGTGAGAGCTAAGCATTTCTACTGGGCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300413.10 ENST00000582475.1 |
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| CDS-3UTR TCA 90 bp | ACAAATCTCTCCACTTGCTGCATTACAGGGGTCTCTTGCCTTTTGCCTTCTACTCTGGTCTTCAACTCCTaGCCTCGTGATCCACCTGCC | + |
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Preference number: 4 (lower is better) Translates to: TNLSTCCITGVSCLLPSTLVFNS*PRDPPA Trigger: GGCAGGTGGATCACGAGGTCAGGAGTTGAAGACCAG...AGTAGAAGGCAAAAGGCAAGAGACCCCTGTAATGCAGCAAGTGGAGAGATTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR TCA 90 bp | AACTGCCCAGTAGAAATGCTTAGCTCTCACTGTGGTAATTTCGTGAATGTGGAGCTGGTCTCGAACTCCTaGCCTCAAGTGATTCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: NCPVEMLSSHCGNFVNVELVSNS*PQVIRP Trigger: TGGGCGAATCACTTGAGGTCAGGAGTTCGAGACCAG...CTCCACATTCACGAAATTACCACAGTGAGAGCTAAGCATTTCTACTGGGCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CCA 90 bp | AACTGCCCAGTAGAAATGCTTAGCTCTCACTGTGGTAATTTCGTGAATGTGGAGCGACTGCAGTATGAATaGCCGGAAGCGCCTACTCCA | + |
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Preference number: 4 (lower is better) Translates to: NCPVEMLSSHCGNFVNVERLQYE*PEAPTP Trigger: TGGAGTAGGCGCTTCCGGCCATTCATACTGCAGTCG...CTCCACATTCACGAAATTACCACAGTGAGAGCTAAGCATTTCTACTGGGCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300413.10 ENST00000582475.1 |
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| CDS-3UTR CCA 90 bp | TCAAAGAACCCCTTAATAAAGGAGGCACTGACAGGTACATTACACATTAATAGGGGCGCCGTCACCCTCTaGGTCCGACAGCACACAGAA | + |
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Preference number: 4 (lower is better) Translates to: SKNPLIKEALTGTLHINRGAVTL*VRQHTE Trigger: TTCTGTGTGCTGTCGGACCCAGAGGGTGACGGCGCC...CCTATTAATGTGTAATGTACCTGTCAGTGCCTCCTTTATTAAGGGGTTCTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CCA 90 bp | GCAGGGACTACAAGTGTGCACCACGGCACTAAGCTCCAATTTTTATTTGTTATCGGCCTCATGAGTAGCTaGGATTACAGGCGCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: AGTTSVHHGTKLQFLFVIGLMSS*DYRRLS Trigger: TGACAGGCGCCTGTAATCCCAGCTACTCATGAGGCC...GATAACAAATAAAAATTGGAGCTTAGTGCCGTGGTGCACACTTGTAGTCCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CCA 90 bp | ACAAATCTCTCCACTTGCTGCATTACAGGGGTCTCTTGCCTTTTGCCTTCTACTGTAATCCCAGCACATTaGGAGGCCTCGTGCAGATCA | + |
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Preference number: 4 (lower is better) Translates to: TNLSTCCITGVSCLLPSTVIPAH*EASCRS Trigger: TGATCTGCACGAGGCCTCCCAATGTGCTGGGATTAC...AGTAGAAGGCAAAAGGCAAGAGACCCCTGTAATGCAGCAAGTGGAGAGATTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR TCA 90 bp | CCCAGCTTATTAATTAATGAAAGGTATAGGCCGGGGACGCACGGTGGCTCACGCACTGTGGTAATTTCGTaGATGTGGAGGAAACTACTA | + |
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Preference number: 4 (lower is better) Translates to: PSLLINERYRPGTHGGSRTVVIS*MWRKLL Trigger: TAGTAGTTTCCTCCACATTCACGAAATTACCACAGT...GCGTGAGCCACCGTGCGTCCCCGGCCTATACCTTTCATTAATTAATAAGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR TCA 90 bp | AAACTGTTACTAGACTGGCTTCACACTGCAAACATCCTAGACACAAAAACTCTCACGCAGAGGTTGCAGTaGGCCAAGATCGCACCACTG | + |
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Preference number: 4 (lower is better) Translates to: KLLLDWLHTANILDTKTLTQRLQ*AKIAPL Trigger: CAGTGGTGCGATCTTGGCTCACTGCAACCTCTGCGT...GAGAGTTTTTGTGTCTAGGATGTTTGCAGTGTGAAGCCAGTCTAGTAACAGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR GCA 90 bp | TCAAAGAACCCCTTAATAAAGGAGGCACTGACAGGTACATTACACATTAATAGGCCGGGACGCAGAGGTTaGAGTGAGCCAAGATCGCAC | + |
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Preference number: 4 (lower is better) Translates to: SKNPLIKEALTGTLHINRPGRRG*SEPRSH Trigger: GTGCGATCTTGGCTCACTGCAACCTCTGCGTCCCGG...CCTATTAATGTGTAATGTACCTGTCAGTGCCTCCTTTATTAAGGGGTTCTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR GCA 90 bp | AACTGCCCAGTAGAAATGCTTAGCTCTCACTGTGGTAATTTCGTGAATGTGGAGCTCTTCCTCTTCCTCTaGCTCTTCCTGCAACAGCTT | + |
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Preference number: 4 (lower is better) Translates to: NCPVEMLSSHCGNFVNVELFLFL*LFLQQL Trigger: AAGCTGTTGCAGGAAGAGGCAGAGGAAGAGGAAGAG...CTCCACATTCACGAAATTACCACAGTGAGAGCTAAGCATTTCTACTGGGCAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300413.10 ENST00000582475.1 |
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| CDS-3UTR GCA 90 bp | AGGACAGGAGCCAACTGTTTATTTCCTACTCTTGCAGGGTTTTGTTTGACCCCTTCCCCTGTGGGTAGGTaGCACAGAATGAAGAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: RTGANCLFPTLAGFCLTPSPVGR*HRMKSK Trigger: TTTACTCTTCATTCTGTGGCACCTACCCACAGGGGA...AGGGGTCAAACAAAACCCTGCAAGAGTAGGAAATAAACAGTTGGCTCCTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR GCA 90 bp | GCAGGGACTACAAGTGTGCACCACGGCACTAAGCTCCAATTTTTATTTGTTATCTTCAAGCAATTCTCCTaGCTCGGCCTCATGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: AGTTSVHHGTKLQFLFVIFKQFS*LGLMSS Trigger: GCTACTCATGAGGCCGAGGCAGGAGAATTGCTTGAA...GATAACAAATAAAAATTGGAGCTTAGTGCCGTGGTGCACACTTGTAGTCCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR TCA 90 bp | ACAGGTCAGAAGATGGAAAAGAATGAAATCCAGTTATTTATTCCCCCAGCTTATACTCCTGACCTCAAGTaGTTCGCCCATCTCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TGQKMEKNEIQLFIPPAYTPDLK*FAHLGL Trigger: GAGGCCGAGATGGGCGAATCACTTGAGGTCAGGAGT...ATAAGCTGGGGGAATAAATAACTGGATTTCATTCTTTTCCATCTTCTGACCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR GCA 90 bp | AGGACAGGAGCCAACTGTTTATTTCCTACTCTTGCAGGGTTTTGTTTGACCCCTATTACAGGGGTCTCTTaGCTTTTGCCTTCTACTTGG | + |
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Preference number: 4 (lower is better) Translates to: RTGANCLFPTLAGFCLTPITGVS*LLPSTW Trigger: CCAAGTAGAAGGCAAAAGGCAAGAGACCCCTGTAAT...AGGGGTCAAACAAAACCCTGCAAGAGTAGGAAATAAACAGTTGGCTCCTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CCA 90 bp | TCAAAGAACCCCTTAATAAAGGAGGCACTGACAGGTACATTACACATTAATAGGCCCTCTTGGCCAAGCTaGTCTTCAACTCCTGACCTC | + |
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Preference number: 4 (lower is better) Translates to: SKNPLIKEALTGTLHINRPSWPS*SSTPDL Trigger: GAGGTCAGGAGTTGAAGACCAGCTTGGCCAAGAGGG...CCTATTAATGTGTAATGTACCTGTCAGTGCCTCCTTTATTAAGGGGTTCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR TCA 90 bp | TCTCTTTTATTCTCAAAGAACCCCTTAATAAAGGAGGCACTGACAGGTACATTAAGCCTCCTGAGTAACTaGGATTACAGGCACCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: SLLFSKNPLIKEALTGTLSLLSN*DYRHPP Trigger: TGGCGGGTGCCTGTAATCTCAGTTACTCAGGAGGCT...TAATGTACCTGTCAGTGCCTCCTTTATTAAGGGGTTCTTTGAGAATAAAAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR TCA 90 bp | ACAGGTCAGAAGATGGAAAAGAATGAAATCCAGTTATTTATTCCCCCAGCTTATCCTCCAGGGTTCAAGTaGTTCTCCTGCCTAAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TGQKMEKNEIQLFIPPAYPPGFK*FSCLSL Trigger: GAGGCTTAGGCAGGAGAATCACTTGAACCCTGGAGG...ATAAGCTGGGGGAATAAATAACTGGATTTCATTCTTTTCCATCTTCTGACCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CCA 90 bp | ACAGGTCAGAAGATGGAAAAGAATGAAATCCAGTTATTTATTCCCCCAGCTTATCGACTGCAGTATGAATaGCCGGAAGCGCCTACTCCA | + |
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Preference number: 4 (lower is better) Translates to: TGQKMEKNEIQLFIPPAYRLQYE*PEAPTP Trigger: TGGAGTAGGCGCTTCCGGCCATTCATACTGCAGTCG...ATAAGCTGGGGGAATAAATAACTGGATTTCATTCTTTTCCATCTTCTGACCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR CAA 72 bp | AACAAATCTCTCCACTTGCTGCATTACAGGGGTCTCTaGCCTTTTGCCTTCTACTTGGATACAAGCAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKSLHLLHYRGL*PFAFYLDTSNR Trigger: CCTATTGCTTGTATCCAAGTAGAAGGCAAAAGGCAAGAGACCCCTGTAATGCAGCAAGTGGAGAGATTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR CAA 72 bp | AGGAGCCAACTGTTTATTTCCTACTCTTGCAGGGTTTaGTTTGACCCCTTCAACAAATCTCTCCACTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RSQLFISYSCRV*FDPFNKSLHLL Trigger: CAGCAAGTGGAGAGATTTGTTGAAGGGGTCAAACAAAACCCTGCAAGAGTAGGAAATAAACAGTTGGCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR TCA 90 bp | AACTGCCCAGTAGAAATGCTTAGCTCTCACTGTGGTAATTTCGTGAATGTGGAGGGGCTACCTGATTTGTaGATTGTCCTTTGCTCAATT | + |
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Preference number: 4 (lower is better) Translates to: NCPVEMLSSHCGNFVNVEGLPDL*IVLCSI Trigger: AATTGAGCAAAGGACAATTCACAAATCAGGTAGCCC...CTCCACATTCACGAAATTACCACAGTGAGAGCTAAGCATTTCTACTGGGCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300413.10 ENST00000582475.1 |
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| CDS-3UTR GCA 90 bp | CTAAGTTTCAGCCAACCAAAGACAGCGAACTGTTCAAACCATATTCAAATAAGGCTCTTCCTCTTCCTCTaGCTCTTCCTGCAACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSFSQPKTANCSNHIQIRLFLFL*LFLQQL Trigger: AAGCTGTTGCAGGAAGAGGCAGAGGAAGAGGAAGAG...CCTTATTTGAATATGGTTTGAACAGTTCGCTGTCTTTGGTTGGCTGAAACTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR GCA 90 bp | TCAAAGAACCCCTTAATAAAGGAGGCACTGACAGGTACATTACACATTAATAGGTCACTCAGGCTGAAGTaGAGTGGTGTGATCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKNPLIKEALTGTLHINRSLRLK*SGVISA Trigger: AGCTGAGATCACACCACTGCACTTCAGCCTGAGTGA...CCTATTAATGTGTAATGTACCTGTCAGTGCCTCCTTTATTAAGGGGTTCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR GCA 90 bp | AACTGCCCAGTAGAAATGCTTAGCTCTCACTGTGGTAATTTCGTGAATGTGGAGAGACTGGCTTCACACTaGAAACATCCTAGACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: NCPVEMLSSHCGNFVNVERLASH*KHPRHK Trigger: TTTGTGTCTAGGATGTTTGCAGTGTGAAGCCAGTCT...CTCCACATTCACGAAATTACCACAGTGAGAGCTAAGCATTTCTACTGGGCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CCA 90 bp | TCTCTTTTATTCTCAAAGAACCCCTTAATAAAGGAGGCACTGACAGGTACATTAGGGGTTTCACCCTCTTaGCCAAGCTGGTCTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SLLFSKNPLIKEALTGTLGVSPS*PSWSST Trigger: AGTTGAAGACCAGCTTGGCCAAGAGGGTGAAACCCC...TAATGTACCTGTCAGTGCCTCCTTTATTAAGGGGTTCTTTGAGAATAAAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR TCA 90 bp | AACTGCCCAGTAGAAATGCTTAGCTCTCACTGTGGTAATTTCGTGAATGTGGAGACTGTGGTAATTTCGTaGATGTGGAGGAAACTACTA | + |
|
Preference number: 4 (lower is better) Translates to: NCPVEMLSSHCGNFVNVETVVIS*MWRKLL Trigger: TAGTAGTTTCCTCCACATTCACGAAATTACCACAGT...CTCCACATTCACGAAATTACCACAGTGAGAGCTAAGCATTTCTACTGGGCAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300413.10 ENST00000582475.1 |
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| CDS-3UTR TCA 90 bp | ACAAATCTCTCCACTTGCTGCATTACAGGGGTCTCTTGCCTTTTGCCTTCTACTCATATTCAGTGCATGTaGAGTAGAAGGGTATATATC | + |
|
Preference number: 4 (lower is better) Translates to: TNLSTCCITGVSCLLPSTHIQCM*SRRVYI Trigger: GATATATACCCTTCTACTTCACATGCACTGAATATG...AGTAGAAGGCAAAAGGCAAGAGACCCCTGTAATGCAGCAAGTGGAGAGATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR GCA 90 bp | AAACTGTTACTAGACTGGCTTCACACTGCAAACATCCTAGACACAAAAACTCTCGGGTCTCTTGCCTTTTaGCTTCTACTTGGATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLLLDWLHTANILDTKTLGSLAF*LLLGYK Trigger: CTTGTATCCAAGTAGAAGGCAAAAGGCAAGAGACCC...GAGAGTTTTTGTGTCTAGGATGTTTGCAGTGTGAAGCCAGTCTAGTAACAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CCA 90 bp | CTAAGTTTCAGCCAACCAAAGACAGCGAACTGTTCAAACCATATTCAAATAAGGCCTCTGAGCCTATTATaGTTCAGGGGCTACCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LSFSQPKTANCSNHIQIRPLSLL*FRGYLI Trigger: AATCAGGTAGCCCCTGAACCATAATAGGCTCAGAGG...CCTTATTTGAATATGGTTTGAACAGTTCGCTGTCTTTGGTTGGCTGAAACTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CCA 90 bp | CTTTTTCTTCACCCAATTTTAGCCCTTTCACATGGAAATGAAATAATGACCTCTCTTCAACTATGCAGCTaGGCTGAAGCCTCTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPILALSHGNEIMTSLQLCS*AEASEP Trigger: AGGCTCAGAGGCTTCAGCCCAGCTGCATAGTTGAAG...AGAGGTCATTATTTCATTTCCATGTGAAAGGGCTAAAATTGGGTGAAGAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR TCA 90 bp | GCAGGGACTACAAGTGTGCACCACGGCACTAAGCTCCAATTTTTATTTGTTATCAGCTTTACAAAGAACTaGTGCACTGAGAGACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGTTSVHHGTKLQFLFVISFTKN*CTERHF Trigger: AAAATGTCTCTCAGTGCATCAGTTCTTTGTAAAGCT...GATAACAAATAAAAATTGGAGCTTAGTGCCGTGGTGCACACTTGTAGTCCCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR GCA 90 bp | TCAAAGAACCCCTTAATAAAGGAGGCACTGACAGGTACATTACACATTAATAGGACAAATCTCTCCACTTaGTGCATTACAGGGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKNPLIKEALTGTLHINRTNLST*CITGVS Trigger: AGAGACCCCTGTAATGCAGCAAGTGGAGAGATTTGT...CCTATTAATGTGTAATGTACCTGTCAGTGCCTCCTTTATTAAGGGGTTCTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR TCA 90 bp | CTAAGTTTCAGCCAACCAAAGACAGCGAACTGTTCAAACCATATTCAAATAAGGGGGCTACCTGATTTGTaGATTGTCCTTTGCTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LSFSQPKTANCSNHIQIRGLPDL*IVLCSI Trigger: AATTGAGCAAAGGACAATTCACAAATCAGGTAGCCC...CCTTATTTGAATATGGTTTGAACAGTTCGCTGTCTTTGGTTGGCTGAAACTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR TCA 90 bp | CTAAGTTTCAGCCAACCAAAGACAGCGAACTGTTCAAACCATATTCAAATAAGGTTGCAGGGTTTTGTTTaGCCCCTTCAACAAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSFSQPKTANCSNHIQIRLQGFV*PLQQIS Trigger: AGAGATTTGTTGAAGGGGTCAAACAAAACCCTGCAA...CCTTATTTGAATATGGTTTGAACAGTTCGCTGTCTTTGGTTGGCTGAAACTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR GCA 90 bp | TCAAAGAACCCCTTAATAAAGGAGGCACTGACAGGTACATTACACATTAATAGGCAGATGTGTACAAAATaGTGCAGTCCTAAGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKNPLIKEALTGTLHINRQMCTK*CSPKIP Trigger: TGGGATCTTAGGACTGCAGCATTTTGTACACATCTG...CCTATTAATGTGTAATGTACCTGTCAGTGCCTCCTTTATTAAGGGGTTCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR TCA 90 bp | CTAAGTTTCAGCCAACCAAAGACAGCGAACTGTTCAAACCATATTCAAATAAGGTGTAATACAACTGGGTaGCCACTGCCAATAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSFSQPKTANCSNHIQIRCNTTG*PLPIIC Trigger: ACAAATTATTGGCAGTGGTCACCCAGTTGTATTACA...CCTTATTTGAATATGGTTTGAACAGTTCGCTGTCTTTGGTTGGCTGAAACTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR GCA 90 bp | TCTCTTTTATTCTCAAAGAACCCCTTAATAAAGGAGGCACTGACAGGTACATTAATAAATCTTCAACTATaGAGCTGGGCTGAAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLFSKNPLIKEALTGTLINLQL*SWAEAS Trigger: AGAGGCTTCAGCCCAGCTGCATAGTTGAAGATTTAT...TAATGTACCTGTCAGTGCCTCCTTTATTAAGGGGTTCTTTGAGAATAAAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR GCA 90 bp | TCAAAGAACCCCTTAATAAAGGAGGCACTGACAGGTACATTACACATTAATAGGATGTGTACAAAATGCTaGAGTCCTAAGATCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SKNPLIKEALTGTLHINRMCTKC*SPKIPS Trigger: AGATGGGATCTTAGGACTGCAGCATTTTGTACACAT...CCTATTAATGTGTAATGTACCTGTCAGTGCCTCCTTTATTAAGGGGTTCTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CCA 90 bp | CTAAGTTTCAGCCAACCAAAGACAGCGAACTGTTCAAACCATATTCAAATAAGGCTTTTGCCTTCTACTTaGATACAAGCAATAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSFSQPKTANCSNHIQIRLLPST*IQAIGA Trigger: TGCTCCTATTGCTTGTATCCAAGTAGAAGGCAAAAG...CCTTATTTGAATATGGTTTGAACAGTTCGCTGTCTTTGGTTGGCTGAAACTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CCA 90 bp | CTAAGTTTCAGCCAACCAAAGACAGCGAACTGTTCAAACCATATTCAAATAAGGAAACTGTTACTAGACTaGCTTCACACTGCAAACATC | + |
|
Preference number: 4 (lower is better) Translates to: LSFSQPKTANCSNHIQIRKLLLD*LHTANI Trigger: GATGTTTGCAGTGTGAAGCCAGTCTAGTAACAGTTT...CCTTATTTGAATATGGTTTGAACAGTTCGCTGTCTTTGGTTGGCTGAAACTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| 3UTR CAA 72 bp | AGCCTATTATGGTTCAGGGGCTACCTGATTTGTGAATaGTCCTTTGCTCAATTAAACTCTGCCAAATTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLWFRGYLICE*SFAQLNSAKFN Trigger: ATTAAATTTGGCAGAGTTTAATTGAGCAAAGGACAATTCACAAATCAGGTAGCCCCTGAACCATAATAGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CCA 90 bp | CTTTTTCTTCACCCAATTTTAGCCCTTTCACATGGAAATGAAATAATGACCTCTGCCTGTCACTGCACCTaGCTAACTTTTGTATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LFLHPILALSHGNEIMTSACHCT*LTFVFL Trigger: TAAAAATACAAAAGTTAGCCAGGTGCAGTGACAGGC...AGAGGTCATTATTTCATTTCCATGTGAAAGGGCTAAAATTGGGTGAAGAAAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CAA 90 bp | AACTGCCCAGTAGAAATGCTTAGCTCTCACTGTGGTAATTTCGTGAATGTGGAGTGGGGTTTCACCCTCTaGGCCAAGCTGGTCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: NCPVEMLSSHCGNFVNVEWGFTL*AKLVFN Trigger: GTTGAAGACCAGCTTGGCCAAGAGGGTGAAACCCCA...CTCCACATTCACGAAATTACCACAGTGAGAGCTAAGCATTTCTACTGGGCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CAA 90 bp | TCAAAGAACCCCTTAATAAAGGAGGCACTGACAGGTACATTACACATTAATAGGTGTAATCCCAGCACATaGGGAGGCCTCGTGCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SKNPLIKEALTGTLHINRCNPST*GGLVQI Trigger: GATCTGCACGAGGCCTCCCAATGTGCTGGGATTACA...CCTATTAATGTGTAATGTACCTGTCAGTGCCTCCTTTATTAAGGGGTTCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CAA 90 bp | CTAAGTTTCAGCCAACCAAAGACAGCGAACTGTTCAAACCATATTCAAATAAGGAGGCACAATAATCTCTaGAACCCGGGACGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSFSQPKTANCSNHIQIRRHNNL*NPGRRG Trigger: ACCTCTGCGTCCCGGGTTCAAGAGATTATTGTGCCT...CCTTATTTGAATATGGTTTGAACAGTTCGCTGTCTTTGGTTGGCTGAAACTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CAA 90 bp | ACAAATCTCTCCACTTGCTGCATTACAGGGGTCTCTTGCCTTTTGCCTTCTACTCATATTGGTTGTATCTaGTCAAGCCAACTCACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TNLSTCCITGVSCLLPSTHIGCI*SSQLTF Trigger: AAAGGTGAGTTGGCTTGACAAGATACAACCAATATG...AGTAGAAGGCAAAAGGCAAGAGACCCCTGTAATGCAGCAAGTGGAGAGATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CAA 90 bp | GCAGGGACTACAAGTGTGCACCACGGCACTAAGCTCCAATTTTTATTTGTTATCTACTCTTGCAGGGTTTaGTTTGACCCCTTCAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: AGTTSVHHGTKLQFLFVIYSCRV*FDPFNK Trigger: TTTGTTGAAGGGGTCAAACAAAACCCTGCAAGAGTA...GATAACAAATAAAAATTGGAGCTTAGTGCCGTGGTGCACACTTGTAGTCCCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CAA 90 bp | TCTCTTTTATTCTCAAAGAACCCCTTAATAAAGGAGGCACTGACAGGTACATTACATTACAGGGGTCTCTaGCCTTTTGCCTTCTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLFSKNPLIKEALTGTLHYRGL*PFAFYL Trigger: CAAGTAGAAGGCAAAAGGCAAGAGACCCCTGTAATG...TAATGTACCTGTCAGTGCCTCCTTTATTAAGGGGTTCTTTGAGAATAAAAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CAA 90 bp | TCAAAGAACCCCTTAATAAAGGAGGCACTGACAGGTACATTACACATTAATAGGCTTGCAGGGTTTTGTTaGACCCCTTCAACAAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SKNPLIKEALTGTLHINRLAGFC*TPSTNL Trigger: GAGATTTGTTGAAGGGGTCAAACAAAACCCTGCAAG...CCTATTAATGTGTAATGTACCTGTCAGTGCCTCCTTTATTAAGGGGTTCTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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| CDS-3UTR CAA 90 bp | CTTTTTCTTCACCCAATTTTAGCCCTTTCACATGGAAATGAAATAATGACCTCTAACAAATCTCTCCACTaGCTGCATTACAGGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LFLHPILALSHGNEIMTSNKSLH*LHYRGL Trigger: GAGACCCCTGTAATGCAGCAAGTGGAGAGATTTGTT...AGAGGTCATTATTTCATTTCCATGTGAAAGGGCTAAAATTGGGTGAAGAAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300413.10 |
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