Pregenerated sensors for SNRPB (Homo sapiens)
Ensembl gene IDs: ENSG00000125835Ensembl transcript IDs: ENST00000438552.6, ENST00000474384.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCGAGCAATACCAGTATCTTTGGGAGGAGGTCCCTCTACTGTCATTaGGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCG | + |
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Preference number: 1 (lower is better) Translates to: SSNTSIFGRRSLYCH*DQILPSQQHQTEDS Trigger: CGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGACAGTAGAGGGACCTCCTCCCAAAGATACTGGTATTGCTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCATCATGCCTGGAGGGGGTGCTCCTCGGCCCATAGGTGGGGGAGGACCCCCCTCTGCCAGCAGCCCTaGCGATCCCTGGGCCCCCGG | + |
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Preference number: 2 (lower is better) Translates to: AHHAWRGCSSAHRWGRTPLCQQP*RSLGPR Trigger: CCGGGGGCCCAGGGATCGGCAGGGCTGCTGGCAGAG...GGGGGTCCTCCCCCACCTATGGGCCGAGGAGCACCCCCTCCAGGCATGATGGGC 73% GC, longest homopolymer 6 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCATCATGCCTGGAGGGGGTGCTCCTCGGCCCATAGGTGGGGGAGGACCCCCGAGCCCCGGCAATACTaGCTGTGGCAGCAGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: AHHAWRGCSSAHRWGRTPEPRQY*LWQQLQ Trigger: CTGCAGCTGCTGCCACAGCCAGTATTGCCGGGGCTC...GGGGGTCCTCCCCCACCTATGGGCCGAGGAGCACCCCCTCCAGGCATGATGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCATCATGCCTGGAGGGGGTGCTCCTCGGCCCATAGGTGGGGGAGGACCCCCCGGCCAGGTGGGTACTaGGTTGGAGCCCCGGCAATA | + |
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Preference number: 2 (lower is better) Translates to: AHHAWRGCSSAHRWGRTPRPGGY*VGAPAI Trigger: TATTGCCGGGGCTCCAACCCAGTACCCACCTGGCCG...GGGGGTCCTCCCCCACCTATGGGCCGAGGAGCACCCCCTCCAGGCATGATGGGC 69% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTGGGCCCATCATGCCTGGAGGGGGTGCTCCTCGGCCCATAGGTGGGGGAAGTCCTGCAGGAGCCTaGGGCATGGGAACCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GGGPIMPGGGAPRPIGGGSPAGA*GMGTPA Trigger: AGCTGGGGTTCCCATGCCCCAGGCTCCTGCAGGACT...TCCCCCACCTATGGGCCGAGGAGCACCCCCTCCAGGCATGATGGGCCCACCTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTGGGATGGCCCGCCAACCCCACGGACTGGCCCAGCAAGTCCTGCAGGAGCCCAGCTGGGATTCCTCTaGCAGCAGCCCTGCCGATCC | + |
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Preference number: 2 (lower is better) Translates to: CWDGPPTPRTGPASPAGAQLGFL*QQPCRS Trigger: GGATCGGCAGGGCTGCTGGCAGAGGAATCCCAGCTG...GGCTCCTGCAGGACTTGCTGGGCCAGTCCGTGGGGTTGGCGGGCCATCCCAACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGTGGGGTCATCACCTGTTGGGATGGCCCGCCAACCCCACGGACTGGCCCAGTCTAGGGCCTTGGTaGGCGCATTCCCGGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SLWGHHLLGWPANPTDWPSLGPW*AHSRGR Trigger: CCTCCCCCGGGAATGCGCCCACCAAGGCCCTAGACT...GGGCCAGTCCGTGGGGTTGGCGGGCCATCCCAACAGGTGATGACCCCACAAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTGGGATGGCCCGCCAACCCCACGGACTGGCCCAGCAAGTCCTGCAGGAGCCTCCCTCTACTGTCATTaGGACCAGATTCTCCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: CWDGPPTPRTGPASPAGASLYCH*DQILPS Trigger: CGAGGGGAGAATCTGGTCTCAATGACAGTAGAGGGA...GGCTCCTGCAGGACTTGCTGGGCCAGTCCGTGGGGTTGGCGGGCCATCCCAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| 3UTR-3UTR TCA 90 bp | GACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTTCTCTTCCCTGGAGTTCTTTGGCCCTaGAGAGGGTCAGAGGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: DQILPSQQHQTEDSLLFPGVLWP*RGSEAS Trigger: AGAAGCCTCTGACCCTCTTCAGGGCCAAAGAACTCC...AGGGAAGAGAAGCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGTGGGGTCATCACCTGTTGGGATGGCCCGCCAACCCCACGGACTGGCCCCCCTTTCTGCTTGTTTaGAGTTCTTTGGCCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SLWGHHLLGWPANPTDWPPFLLV*SSLALK Trigger: CTTCAGGGCCAAAGAACTCCAAACAAGCAGAAAGGG...GGGCCAGTCCGTGGGGTTGGCGGGCCATCCCAACAGGTGATGACCCCACAAGGA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTGGGATGGCCCGCCAACCCCACGGACTGGCCCAGCAAGTCCTGCAGGAGCCCTTCTCTTCCCTTTCTaGTTGTTTGGAGTTCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: CWDGPPTPRTGPASPAGALLFPF*LFGVLW Trigger: CCAAAGAACTCCAAACAAGCAGAAAGGGAAGAGAAG...GGCTCCTGCAGGACTTGCTGGGCCAGTCCGTGGGGTTGGCGGGCCATCCCAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| 3UTR CAA 90 bp | CTCGAGCAATACCAGTATCTTTGGGAGGAGGTCCCTCTACTGTCATaGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTC | + |
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Preference number: 2 (lower is better) Translates to: LEQYQYLWEEVPLLS*RPDSPLAAAPDRGL Trigger: GAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGACAGTAGAGGGACCTCCTCCCAAAGATACTGGTATTGCTCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGGTGGGCCCATCATGCCTGGAGGGGGTGCTCCTCGGCCCATAGGTGGGGGAGCAATACCAGTATCTTaGGGAGGAGGTCCCTCTACT | + |
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Preference number: 3 (lower is better) Translates to: GGGPIMPGGGAPRPIGGGAIPVS*GGGPST Trigger: AGTAGAGGGACCTCCTCCCAAAGATACTGGTATTGC...TCCCCCACCTATGGGCCGAGGAGCACCCCCTCCAGGCATGATGGGCCCACCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| 3UTR TCA 72 bp | ACCAGTATCTTTGGGAGGAGGTCCCTCTACTGTCATTaGGACCAGATTCTCCCCTCGCAGCAGCACCAGACC | + |
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Preference number: 3 (lower is better) Translates to: TSIFGRRSLYCH*DQILPSQQHQT Trigger: GGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGACAGTAGAGGGACCTCCTCCCAAAGATACTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | TCCTTGTGGGGTCATCACCTGTTGGGATGGCCCGCCAACCCCACGGACTGGCCCTGGGCCCATCATGCCTaGAGGGGGTGCTCCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SLWGHHLLGWPANPTDWPWAHHA*RGCSSA Trigger: GGCCGAGGAGCACCCCCTCCAGGCATGATGGGCCCA...GGGCCAGTCCGTGGGGTTGGCGGGCCATCCCAACAGGTGATGACCCCACAAGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR GCA 90 bp | ACTGTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCCTCTGCCAGCAGCCCTaGCGATCCCTGGGCCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: TVIETRFSPRSSTRPRTRLCQQP*RSLGPR Trigger: CCGGGGGCCCAGGGATCGGCAGGGCTGCTGGCAGAG...GCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGACAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR GCA 90 bp | TCCTTGTGGGGTCATCACCTGTTGGGATGGCCCGCCAACCCCACGGACTGGCCCGGCTGTGGCAGCAGCTaGAGCGGCTGCAACAGTACC | + |
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Preference number: 4 (lower is better) Translates to: SLWGHHLLGWPANPTDWPGCGSS*SGCNST Trigger: GGTACTGTTGCAGCCGCTGCAGCTGCTGCCACAGCC...GGGCCAGTCCGTGGGGTTGGCGGGCCATCCCAACAGGTGATGACCCCACAAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | GGAGGTGGGCCCATCATGCCTGGAGGGGGTGCTCCTCGGCCCATAGGTGGGGGATCTCATACCAGGAGGTaGGCCCATCATGCCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GGGPIMPGGGAPRPIGGGSHTRR*AHHAWR Trigger: CCTCCAGGCATGATGGGCCCACCTCCTGGTATGAGA...TCCCCCACCTATGGGCCGAGGAGCACCCCCTCCAGGCATGATGGGCCCACCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR TCA 90 bp | GGAGGTGGGCCCATCATGCCTGGAGGGGGTGCTCCTCGGCCCATAGGTGGGGGAGGAGTTCTTTGGCCCTaGAGAGGGTCAGAGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GGGPIMPGGGAPRPIGGGGVLWP*RGSEAS Trigger: AGAAGCCTCTGACCCTCTTCAGGGCCAAAGAACTCC...TCCCCCACCTATGGGCCGAGGAGCACCCCCTCCAGGCATGATGGGCCCACCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | GTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTTCTCCTCGGCCCATAGGTaGGGGAGGACCCCCACGGCC | + |
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Preference number: 4 (lower is better) Translates to: VIETRFSPRSSTRPRTRFSSAHR*GRTPTA Trigger: GGCCGTGGGGGTCCTCCCCCACCTATGGGCCGAGGA...GAAGCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | GACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTTCTCTTCCCTGCCAACCCCACGGACTaGCCCAGCAAGTCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: DQILPSQQHQTEDSLLFPANPTD*PSKSCR Trigger: CCTGCAGGACTTGCTGGGCCAGTCCGTGGGGTTGGC...AGGGAAGAGAAGCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR GCA 90 bp | GTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTTCCATGCCTGGAGGGGGTaGTCCTCGGCCCATAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VIETRFSPRSSTRPRTRFHAWRG*SSAHRW Trigger: CCACCTATGGGCCGAGGAGCACCCCCTCCAGGCATG...GAAGCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | GACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTTCTCTTCCCTAGGGGGCATGCCCATTaGAGTCCCTCTTCCAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: DQILPSQQHQTEDSLLFPRGHAH*SPSSRG Trigger: CCCCCTGGAAGAGGGACTCCAATGGGCATGCCCCCT...AGGGAAGAGAAGCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR GCA 90 bp | ACTGTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCCAGCTGGGATTCCTCTaGCAGCAGCCCTGCCGATCC | + |
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Preference number: 4 (lower is better) Translates to: TVIETRFSPRSSTRPRTRQLGFL*QQPCRS Trigger: GGATCGGCAGGGCTGCTGGCAGAGGAATCCCAGCTG...GCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | ACTGTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCCATCACCTGTTGGGATaGCCCGCCAACCCCACGGAC | + |
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Preference number: 4 (lower is better) Translates to: TVIETRFSPRSSTRPRTRHHLLG*PANPTD Trigger: GTCCGTGGGGTTGGCGGGCCATCCCAACAGGTGATG...GCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | ACTGTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCGAGCCCCGGCAATACTaGCTGTGGCAGCAGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TVIETRFSPRSSTRPRTREPRQY*LWQQLQ Trigger: CTGCAGCTGCTGCCACAGCCAGTATTGCCGGGGCTC...GCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | GTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTTCCGGCCAGGTGGGTACTaGGTTGGAGCCCCGGCAATA | + |
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Preference number: 4 (lower is better) Translates to: VIETRFSPRSSTRPRTRFRPGGY*VGAPAI Trigger: TATTGCCGGGGCTCCAACCCAGTACCCACCTGGCCG...GAAGCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | AGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTTCTCTTCCCTTTCTAGTCTAGGGCCTTGGTaGGCGCATTCCCGGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RFSPRSSTRPRTRFSSLSSLGPW*AHSRGR Trigger: CCTCCCCCGGGAATGCGCCCACCAAGGCCCTAGACT...AGAAAGGGAAGAGAAGCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR GCA 90 bp | ACTGTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCGCATCTTGCTGCTCTTaGCCACCGTCATGGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: TVIETRFSPRSSTRPRTRASCCS*PPSWWR Trigger: CCGCCACCATGACGGTGGGCAAGAGCAGCAAGATGC...GCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | AGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTTCTCTTCCCTTTCTAGTCCTGCAGGAGCCTaGGGCATGGGAACCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RFSPRSSTRPRTRFSSLSSPAGA*GMGTPA Trigger: AGCTGGGGTTCCCATGCCCCAGGCTCCTGCAGGACT...AGAAAGGGAAGAGAAGCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | TCCTTGTGGGGTCATCACCTGTTGGGATGGCCCGCCAACCCCACGGACTGGCCCAGTACCTCTTCCTTGTaGGGTCATCACCTGTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SLWGHHLLGWPANPTDWPSTSSL*GHHLLG Trigger: TCCCAACAGGTGATGACCCCACAAGGAAGAGGTACT...GGGCCAGTCCGTGGGGTTGGCGGGCCATCCCAACAGGTGATGACCCCACAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR GCA 90 bp | GTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTTCAAGATCCGGCCGTCCTaGAGGATGCACCTCATCCTG | + |
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Preference number: 4 (lower is better) Translates to: VIETRFSPRSSTRPRTRFKIRPS*RMHLIL Trigger: CAGGATGAGGTGCATCCTGCAGGACGGCCGGATCTT...GAAGCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | TCTACTGTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTGGGGTCATCACCTGTTaGGATGGCCCGCCAACCCCA | + |
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Preference number: 4 (lower is better) Translates to: STVIETRFSPRSSTRPRTGVITC*DGPPTP Trigger: TGGGGTTGGCGGGCCATCCCAACAGGTGATGACCCC...AGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGACAGTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR GCA 90 bp | GACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTTCTCTTCCCTGGCCGTCCTGCAGGATaGACCTCATCCTGTAATCAA | + |
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Preference number: 4 (lower is better) Translates to: DQILPSQQHQTEDSLLFPGRPAG*TSSCNQ Trigger: TTGATTACAGGATGAGGTGCATCCTGCAGGACGGCC...AGGGAAGAGAAGCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR TCA 90 bp | AGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTTCTCTTCCCTTTCTTCCCTCTACTGTCATTaGGACCAGATTCTCCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: RFSPRSSTRPRTRFSSLSSLYCH*DQILPS Trigger: CGAGGGGAGAATCTGGTCTCAATGACAGTAGAGGGA...AGAAAGGGAAGAGAAGCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | GACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTTCTCTTCCCTCAATACCAGTATCTTTaGGAGGAGGTCCCTCTACTG | + |
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Preference number: 4 (lower is better) Translates to: DQILPSQQHQTEDSLLFPQYQYL*EEVPLL Trigger: CAGTAGAGGGACCTCCTCCCAAAGATACTGGTATTG...AGGGAAGAGAAGCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | TCTACTGTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCAGACCAGGCTGCATTaGGAGAGCCCTTTAGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: STVIETRFSPRSSTRPRTQTRLH*ESPLGY Trigger: GTAGCCTAAAGGGCTCTCCCAATGCAGCCTGGTCTG...AGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGACAGTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CCA 90 bp | ACTGTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCCCCTTTCTGCTTGTTTaGAGTTCTTTGGCCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: TVIETRFSPRSSTRPRTRPFLLV*SSLALK Trigger: CTTCAGGGCCAAAGAACTCCAAACAAGCAGAAAGGG...GCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| 3UTR CAA 72 bp | TACCAGTATCTTTGGGAGGAGGTCCCTCTACTGTCATaGAGACCAGATTCTCCCCTCGCAGCAGCACCAGAC | + |
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Preference number: 4 (lower is better) Translates to: YQYLWEEVPLLS*RPDSPLAAAPD Trigger: GTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGACAGTAGAGGGACCTCCTCCCAAAGATACTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR GCA 90 bp | ACTGTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCCTTCTCTTCCCTTTCTaGTTGTTTGGAGTTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: TVIETRFSPRSSTRPRTRLLFPF*LFGVLW Trigger: CCAAAGAACTCCAAACAAGCAGAAAGGGAAGAGAAG...GCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CAA 90 bp | GCCCATCATGCCTGGAGGGGGTGCTCCTCGGCCCATAGGTGGGGGAGGACCCCCGTCCCTCTACTGTCATaGAGACCAGATTCTCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: AHHAWRGCSSAHRWGRTPVPLLS*RPDSPL Trigger: GAGGGGAGAATCTGGTCTCAATGACAGTAGAGGGAC...GGGGGTCCTCCCCCACCTATGGGCCGAGGAGCACCCCCTCCAGGCATGATGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CAA 90 bp | ACTGTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTGGGGTCATCACCTGTaGGGATGGCCCGCCAACCCC | + |
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Preference number: 5 (lower is better) Translates to: TVIETRFSPRSSTRPRTRWGHHL*GWPANP Trigger: GGGGTTGGCGGGCCATCCCAACAGGTGATGACCCCA...GCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGACAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CAA 90 bp | GTCATTGAGACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTTCGAGGGGGCATGCCCATaGGAGTCCCTCTTCCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: VIETRFSPRSSTRPRTRFEGACP*ESLFQG Trigger: CCCCTGGAAGAGGGACTCCAATGGGCATGCCCCCTC...GAAGCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTCTCAATGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS GCA 90 bp | GCCGATTTCCCGCCGCCGCTACCGGAAATGCAGCACCACGTAAAATaGGGTCGGGTAGAAACCTACTTCCGGTCCAGCTCACTAGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: ADFPPPLPEMQHHVK*GRVETYFRSSSLAL Trigger: CAGGGCTAGTGAGCTGGACCGGAAGTAGGTTTCTACCCGACCGCATTTTACGTGGTGCTGCATTTCCGGTAGCGGCGGCGGGAAATCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438552.6 |
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| CDS-3UTR CAA 90 bp | TCCTTGTGGGGTCATCACCTGTTGGGATGGCCCGCCAACCCCACGGACTGGCCCGCAATACCAGTATCTTaGGGAGGAGGTCCCTCTACT | + |
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Preference number: 5 (lower is better) Translates to: SLWGHHLLGWPANPTDWPAIPVS*GGGPST Trigger: AGTAGAGGGACCTCCTCCCAAAGATACTGGTATTGC...GGGCCAGTCCGTGGGGTTGGCGGGCCATCCCAACAGGTGATGACCCCACAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CAA 90 bp | TCCTTGTGGGGTCATCACCTGTTGGGATGGCCCGCCAACCCCACGGACTGGCCCAACAGTACCTCTTCCTaGTGGGGTCATCACCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: SLWGHHLLGWPANPTDWPNSTSS*WGHHLL Trigger: CAACAGGTGATGACCCCACAAGGAAGAGGTACTGTT...GGGCCAGTCCGTGGGGTTGGCGGGCCATCCCAACAGGTGATGACCCCACAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS-3UTR CAA 90 bp | GACCAGATTCTCCCCTCGCAGCAGCACCAGACCGAGGACTCGCTTCTCTTCCCTTCAGACCAGGCTGCATaGGGAGAGCCCTTTAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: DQILPSQQHQTEDSLLFPSDQAA*GEPFRL Trigger: TAGCCTAAAGGGCTCTCCCAATGCAGCCTGGTCTGA...AGGGAAGAGAAGCGAGTCCTCGGTCTGGTGCTGCTGCGAGGGGAGAATCTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474384.2 |
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| CDS GCA 72 bp | CCGCCGCCGCTACCGGAAATGCAGCACCACGTAAAATaGGGTCGGGTAGAAACCTACTTCCGGTCCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PPPLPEMQHHVK*GRVETYFRSSS Trigger: TGAGCTGGACCGGAAGTAGGTTTCTACCCGACCGCATTTTACGTGGTGCTGCATTTCCGGTAGCGGCGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438552.6 |
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