Pregenerated sensors for SNRNP48 (Homo sapiens)
Ensembl gene IDs: ENSG00000168566Ensembl transcript IDs: ENST00000342415.6, ENST00000496946.1, ENST00000634363.1
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCTACTACAATTCACCAGTGTAGTGGTAAACAGTAGTCACCACTaGGGTGAGGACAGAACCGCAGGTGGTGTTCTAAGGGTTATTAGC | + |
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Preference number: 1 (lower is better) Translates to: SLLQFTSVVVNSSHH*GEDRTAGGVLRVIS Trigger: GCTAATAACCCTTAGAACACCACCTGCGGTTCTGTCCTCACCCCAGTGGTGACTACTGTTTACCACTACACTGGTGAATTGTAGTAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR TCA 90 bp | CCTGGTGATTTCCAATTTATAAATCTGAGAGCTGTTTCCCATACCTaGAGCCTAACAGCCAATCTGATCCAAATCCAATCTTTCTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: PGDFQFINLRAVSHT*SLTANLIQIQSFCH Trigger: GTGACAGAAAGATTGGATTTGGATCAGATTGGCTGTTAGGCTTCAGGTATGGGAAACAGCTCTCAGATTTATAAATTGGAAATCACCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR CCA 90 bp | CCAGCCAGTAGATTAGAAATGTTTGTGAGAAGGTACCTTAATGGATaGGCAAGATGGACAGCAGCTATAGTAATTATTCATAGCAGCACT | + |
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Preference number: 1 (lower is better) Translates to: PASRLEMFVRRYLNG*ARWTAAIVIIHSST Trigger: AGTGCTGCTATGAATAATTACTATAGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCTTCTCACAAACATTTCTAATCTACTGGCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR TCA 90 bp | TTGGCAGCCAAGTCTACAAAGAGATCGCTGTCATTTTCAATAATTTaGGAATCAGAGCGCTTTTTCTTTGTCTCCTCAACTACGAAATCA | + |
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Preference number: 1 (lower is better) Translates to: LAAKSTKRSLSFSII*ESERFFFVSSTTKS Trigger: TGATTTCGTAGTTGAGGAGACAAAGAAAAAGCGCTCTGATTCTCAAATTATTGAAAATGACAGCGATCTCTTTGTAGACTTGGCTGCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| 3UTR CCA 90 bp | CTCGAATCACCTCAGTATATGATTTCTTGGTTATGTGAACATTCTTaGCTCTATAGGACTGGCGTCTTCTTTTATAATCTCGTACTTCTG | + |
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Preference number: 1 (lower is better) Translates to: LESPQYMISWLCEHS*LYRTGVFFYNLVLL Trigger: CAGAAGTACGAGATTATAAAAGAAGACGCCAGTCCTATAGAGCCAAGAATGTTCACATAACCAAGAAATCATATACTGAGGTGATTCGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| 3UTR CCA 90 bp | AGATTAGAAATGTTTGTGAGAAGGTACCTTAATGGATGGGCAAGATaGACAGCAGCTATAGTAATTATTCATAGCAGCACTCTAGAAATA | + |
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Preference number: 1 (lower is better) Translates to: RLEMFVRRYLNGWAR*TAAIVIIHSSTLEI Trigger: TATTTCTAGAGTGCTGCTATGAATAATTACTATAGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCTTCTCACAAACATTTCTAATCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR TCA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGCCACCCTCCCAATCCTaGTTTGCACCCCTAATCTCT | + |
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Preference number: 2 (lower is better) Translates to: RRRAGRGGRPMNMFIELMPPSQS*FAPLIS Trigger: AGAGATTAGGGGTGCAAATCAGGATTGGGAGGGTGG...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR TCA 90 bp | TTCCTACTGAATATAACCAGTGCCCTGGGCTCTGCATGGCAGTTGACTTGCCAAGCTGTTTCCCATACCTaGAGCCTAACAGCCAATCTG | + |
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Preference number: 2 (lower is better) Translates to: FLLNITSALGSAWQLTCQAVSHT*SLTANL Trigger: CAGATTGGCTGTTAGGCTTCAGGTATGGGAAACAGC...TTGGCAAGTCAACTGCCATGCAGAGCCCAGGGCACTGGTTATATTCAGTAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR CCA 90 bp | ATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAAACATTCATGAACTCGTGGTAGATCACACCTaGTGCCTGGTGGCTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: MLRMQESFAPEPLNIHELVVDHT*CLVAPS Trigger: GCTGGGAGCCACCAGGCACCAGGTGTGATCTACCAC...GAGTTCATGAATGTTTAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAAACATTCATGAACTCCAGTGCCCTGGGCTCTaGATGGCAGTTGACTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: MLRMQESFAPEPLNIHELQCPGL*MAVDLP Trigger: TGGCAAGTCAACTGCCATGCAGAGCCCAGGGCACTG...GAGTTCATGAATGTTTAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR CCA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGAGGTACCTTAATGGATaGGCAAGATGGACAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RRRAGRGGRPMNMFIELMRYLNG*ARWTAA Trigger: AGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCT...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAAACATTCATGAACTCAGCATTTTGGGAGGCTaGGGACAGGAGGATCATCTG | + |
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Preference number: 2 (lower is better) Translates to: MLRMQESFAPEPLNIHELSILGG*GQEDHL Trigger: CAGATGATCCTCCTGTCCTCAGCCTCCCAAAATGCT...GAGTTCATGAATGTTTAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAAACATTCATGAACTCAAGCAAATCTGTGGCTaGCTAGGGCTAGGGGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: MLRMQESFAPEPLNIHELKQICG*LGLGVE Trigger: CTCTACCCCTAGCCCTAGGCAGCCACAGATTTGCTT...GAGTTCATGAATGTTTAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR CCA 90 bp | ATGTTTGTGAGAAGGTACCTTAATGGATGGGCAAGATGGACAGCAGCTATAGTAAACAGTAGTCACCACTaGGGTGAGGACAGAACCGCA | + |
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Preference number: 2 (lower is better) Translates to: MFVRRYLNGWARWTAAIVNSSHH*GEDRTA Trigger: TGCGGTTCTGTCCTCACCCCAGTGGTGACTACTGTT...TACTATAGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCTTCTCACAAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAAACATTCATGAACTCACTGAATATAACCAGTaGCCTGGGCTCTGCATGGCA | + |
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Preference number: 2 (lower is better) Translates to: MLRMQESFAPEPLNIHELTEYNQ*PGLCMA Trigger: TGCCATGCAGAGCCCAGGGCACTGGTTATATTCAGT...GAGTTCATGAATGTTTAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR TCA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGTATGTGGCAGGGCTGTaGAAATGCTTTTGTCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: RRRAGRGGRPMNMFIELMYVAGL*KCFCQN Trigger: ATTTTGACAAAAGCATTTTCACAGCCCTGCCACATA...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTACTGAGCCTAGGAGTTTaGGGCTGCAGTGAGCTACAG | + |
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Preference number: 2 (lower is better) Translates to: GFIIFMLRMQESFAPEPLLSLGV*GCSELQ Trigger: CTGTAGCTCACTGCAGCCTCAAACTCCTAGGCTCAG...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR GCA 90 bp | TTCCTACTGAATATAACCAGTGCCCTGGGCTCTGCATGGCAGTTGACTTGCCAACCTCTTTTCACCCGATaGCACATTTCATTAAATAGT | + |
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Preference number: 2 (lower is better) Translates to: FLLNITSALGSAWQLTCQPLFTR*HISLNS Trigger: ACTATTTAATGAAATGTGGCATCGGGTGAAAAGAGG...TTGGCAAGTCAACTGCCATGCAGAGCCCAGGGCACTGGTTATATTCAGTAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR CCA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGAAACTAGATCTTATGTaGCAGGGCTGTGAAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: RRRAGRGGRPMNMFIELMKLDLM*QGCENA Trigger: AGCATTTTCACAGCCCTGCCACATAAGATCTAGTTT...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAATCACACCTGGTGCCTaGTGGCTCCCAGCATTTTGG | + |
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Preference number: 2 (lower is better) Translates to: GFIIFMLRMQESFAPEPLITPGA*WLPAFW Trigger: CCAAAATGCTGGGAGCCACCAGGCACCAGGTGTGAT...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR GCA 90 bp | CACCACTGCACTCCAGCCAGTAGATTAGAAATGTTTGTGAGAAGGTACCTTAATCTCCCAATCCTGATTTaGACCCCTAATCTCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: HHCTPASRLEMFVRRYLNLPILI*TPNLSS Trigger: AGATGAGAGATTAGGGGTGCAAATCAGGATTGGGAG...ATTAAGGTACCTTCTCACAAACATTTCTAATCTACTGGCTGGAGTGCAGTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTGTGAGAAGGTACCTTAATGGATGGGCAAGATGGACAGCAGCTATAGTAAAAGCAGCAATTTCATaGTTCATCAGTCACTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: MFVRRYLNGWARWTAAIVKAAIS*FISHSQ Trigger: TTGGGAGTGACTGATGAATCATGAAATTGCTGCTTT...TACTATAGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCTTCTCACAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR GCA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTACAAGGATCAAACAAATaGCTCTTTTCACCCGATGCC | + |
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Preference number: 2 (lower is better) Translates to: GFIIFMLRMQESFAPEPLQGSNK*LFSPDA Trigger: GGCATCGGGTGAAAAGAGGCATTTGTTTGATCCTTG...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR CAA 90 bp | TTTGGCAGCCAAGTCTACAAAGAGATCGCTGTCATTTTCAATAATTaGAGAATCAGAGCGCTTTTTCTTTGTCTCCTCAACTACGAAATC | + |
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Preference number: 2 (lower is better) Translates to: FGSQVYKEIAVIFNN*RIRALFLCLLNYEI Trigger: GATTTCGTAGTTGAGGAGACAAAGAAAAAGCGCTCTGATTCTCAAATTATTGAAAATGACAGCGATCTCTTTGTAGACTTGGCTGCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| 3UTR-3UTR TCA 90 bp | AATTTGAGAATCAGAGCGCTTTTTCTTTGTCTCCTCAACTACGAAATCATAGAGGCAAGACGATCAGCTTaGGTTAGATCACAAACAAAC | + |
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Preference number: 2 (lower is better) Translates to: NLRIRALFLCLLNYEIIEARRSA*VRSQTN Trigger: GTTTGTTTGTGATCTAACTCAAGCTGATCGTCTTGC...CTCTATGATTTCGTAGTTGAGGAGACAAAGAAAAAGCGCTCTGATTCTCAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| 3UTR-3UTR CCA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAAATGGATGGGCAAGATaGACAGCAGCTATAGTAATT | + |
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Preference number: 2 (lower is better) Translates to: GFIIFMLRMQESFAPEPLNGWAR*TAAIVI Trigger: AATTACTATAGCTGCTGTCCATCTTGCCCATCCATT...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR TCA 72 bp | AGGCCAGGGCAAGAGGATCGCCTGAGCCTAGGAGTTTaGGGCTGCAGTGAGCTACAGACTGCACCACTGCAC | + |
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Preference number: 3 (lower is better) Translates to: RPGQEDRLSLGV*GCSELQTAPLH Trigger: GTGCAGTGGTGCAGTCTGTAGCTCACTGCAGCCTCAAACTCCTAGGCTCAGGCGATCCTCTTGCCCTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR GCA 72 bp | CTAAAGTTCCCTCTGACCACCCTCCCAATCCTGATTTaGACCCCTAATCTCTCATCTATACCTCCTACTCGC | + |
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Preference number: 3 (lower is better) Translates to: LKFPLTTLPILI*TPNLSSIPPTR Trigger: GCGAGTAGGAGGTATAGATGAGAGATTAGGGGTGCAAATCAGGATTGGGAGGGTGGTCAGAGGGAACTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR GCA 72 bp | ATAGATCTAATCGGTAACCAAAAGCAAATCTGTGGCTaGCTAGGGCTAGGGGTAGAGGAATTGATTGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: IDLIGNQKQICG*LGLGVEELIGK Trigger: TTTCCCAATCAATTCCTCTACCCCTAGCCCTAGGCAGCCACAGATTTGCTTTTGGTTACCGATTAGATCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR CAA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGCTGAGCATTATGTTTTaGAGACCAATCCAGGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: RRRAGRGGRPMNMFIELMLSIMF*RPIQVN Trigger: ATTAACCTGGATTGGTCTCAAAAACATAATGCTCAG...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR CAA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTACTAGGGGTAGAGGAATaGATTGGGAAAGGGGGTATG | + |
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Preference number: 3 (lower is better) Translates to: GFIIFMLRMQESFAPEPLLGVEE*IGKGGM Trigger: CATACCCCCTTTCCCAATCAATTCCTCTACCCCTAG...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR CAA 90 bp | ATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAAACATTCATGAACTCTGCATGGCAGTTGACTaGCCAATATCTCAATTAAAG | + |
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Preference number: 3 (lower is better) Translates to: MLRMQESFAPEPLNIHELCMAVD*PISQLK Trigger: CTTTAATTGAGATATTGGCAAGTCAACTGCCATGCA...GAGTTCATGAATGTTTAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR CAA 90 bp | ATGTTTGTGAGAAGGTACCTTAATGGATGGGCAAGATGGACAGCAGCTATAGTAGAAAATATTTGTATCTaGATCGTGATAGTGGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: MFVRRYLNGWARWTAAIVENICI*IVIVAA Trigger: TGCAGCCACTATCACGATCAAGATACAAATATTTTC...TACTATAGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCTTCTCACAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR CCA 72 bp | ATGTTTGTGAGAAGGTACCTTAATGGATGGGCAAGATaGACAGCAGCTATAGTAATTATTCATAGCAGCACT | + |
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Preference number: 3 (lower is better) Translates to: MFVRRYLNGWAR*TAAIVIIHSST Trigger: AGTGCTGCTATGAATAATTACTATAGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCTTCTCACAAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR-3UTR CAA 90 bp | TATGTGAACATTCTTGGCTCTATAGGACTGGCGTCTTCTTTTATAATCTCGTACTTTTCGACTATTGTCTaGATTGATTTTGGCAGCCAA | + |
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Preference number: 3 (lower is better) Translates to: YVNILGSIGLASSFIISYFSTIV*IDFGSQ Trigger: TTGGCTGCCAAAATCAATCAAGACAATAGTCGAAAA...GTACGAGATTATAAAAGAAGACGCCAGTCCTATAGAGCCAAGAATGTTCACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| 3UTR TCA 72 bp | TTGTATCTTGATCGTGATAGTGGCTGCACAGAGGTATaGATCTGTCAAAACCCAATAAAATACACACGTAAA | + |
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Preference number: 3 (lower is better) Translates to: LYLDRDSGCTEV*ICQNPIKYTRK Trigger: TTTACGTGTGTATTTTATTGGGTTTTGACAGATTCATACCTCTGTGCAGCCACTATCACGATCAAGATACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| 3UTR CCA 72 bp | CCTCAGTATATGATTTCTTGGTTATGTGAACATTCTTaGCTCTATAGGACTGGCGTCTTCTTTTATAATCTC | + |
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Preference number: 3 (lower is better) Translates to: PQYMISWLCEHS*LYRTGVFFYNL Trigger: GAGATTATAAAAGAAGACGCCAGTCCTATAGAGCCAAGAATGTTCACATAACCAAGAAATCATATACTGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| 3UTR TCA 72 bp | AAGTCTACAAAGAGATCGCTGTCATTTTCAATAATTTaGGAATCAGAGCGCTTTTTCTTTGTCTCCTCAACT | + |
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Preference number: 3 (lower is better) Translates to: KSTKRSLSFSII*ESERFFFVSST Trigger: AGTTGAGGAGACAAAGAAAAAGCGCTCTGATTCTCAAATTATTGAAAATGACAGCGATCTCTTTGTAGACTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| CDS-3UTR GCA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGTCGTTCAGCTCCTCCTaGAGCCGCCGCCGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RRRAGRGGRPMNMFIELMSFSSS*SRRRSS Trigger: GGAGGAGCGGCGGCGGCTGCAGGAGGAGCTGAACGA...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR TCA 90 bp | TTCCTACTGAATATAACCAGTGCCCTGGGCTCTGCATGGCAGTTGACTTGCCAACTGAGCCTAGGAGTTTaGGGCTGCAGTGAGCTACAG | + |
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Preference number: 4 (lower is better) Translates to: FLLNITSALGSAWQLTCQLSLGV*GCSELQ Trigger: CTGTAGCTCACTGCAGCCTCAAACTCCTAGGCTCAG...TTGGCAAGTCAACTGCCATGCAGAGCCCAGGGCACTGGTTATATTCAGTAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR GCA 90 bp | ATTCTTGGCTCTATAGGACTGGCGTCTTCTTTTATAATCTCGTACTTCTGCCAGCTCGCCCTCCATAGCTaGAGCCCACCCGCCAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: ILGSIGLASSFIISYFCQLALHS*SPPAKR Trigger: CCTCTTGGCGGGTGGGCTGCAGCTATGGAGGGCGAG...CTGGCAGAAGTACGAGATTATAAAAGAAGACGCCAGTCCTATAGAGCCAAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| CDS-3UTR GCA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAAGGAAGCGGCCGAACTaGAGACCGCACGCGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: GFIIFMLRMQESFAPEPLRKRPN*RPHAQA Trigger: GGCCTGCGCGTGCGGTCTGCAGTTCGGCCGCTTCCT...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR GCA 90 bp | AATTTGAGAATCAGAGCGCTTTTTCTTTGTCTCCTCAACTACGAAATCATAGAGTCGTTCAGCTCCTCCTaGAGCCGCCGCCGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: NLRIRALFLCLLNYEIIESFSSS*SRRRSS Trigger: GGAGGAGCGGCGGCGGCTGCAGGAGGAGCTGAACGA...CTCTATGATTTCGTAGTTGAGGAGACAAAGAAAAAGCGCTCTGATTCTCAAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| CDS-3UTR GCA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGAAGCAAATCTGTGGCTaGCTAGGGCTAGGGGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: RRRAGRGGRPMNMFIELMKQICG*LGLGVE Trigger: CTCTACCCCTAGCCCTAGGCAGCCACAGATTTGCTT...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR CCA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGAACAGTAGTCACCACTaGGGTGAGGACAGAACCGCA | + |
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Preference number: 4 (lower is better) Translates to: RRRAGRGGRPMNMFIELMNSSHH*GEDRTA Trigger: TGCGGTTCTGTCCTCACCCCAGTGGTGACTACTGTT...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR GCA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTACTCGCCCTCCATAGCTaGAGCCCACCCGCCAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GFIIFMLRMQESFAPEPLLALHS*SPPAKR Trigger: CCTCTTGGCGGGTGGGCTGCAGCTATGGAGGGCGAG...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR GCA 90 bp | TTCCTACTGAATATAACCAGTGCCCTGGGCTCTGCATGGCAGTTGACTTGCCAACAAGGATCAAACAAATaGCTCTTTTCACCCGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLNITSALGSAWQLTCQQGSNK*LFSPDA Trigger: GGCATCGGGTGAAAAGAGGCATTTGTTTGATCCTTG...TTGGCAAGTCAACTGCCATGCAGAGCCCAGGGCACTGGTTATATTCAGTAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR GCA 90 bp | ATGTTTGTGAGAAGGTACCTTAATGGATGGGCAAGATGGACAGCAGCTATAGTAGTAGATCACACCTGGTaGCTGGTGGCTCCCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: MFVRRYLNGWARWTAAIVVDHTW*LVAPSI Trigger: AATGCTGGGAGCCACCAGGCACCAGGTGTGATCTAC...TACTATAGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCTTCTCACAAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR CCA 90 bp | CACCACTGCACTCCAGCCAGTAGATTAGAAATGTTTGTGAGAAGGTACCTTAATATCACACCTGGTGCCTaGTGGCTCCCAGCATTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HHCTPASRLEMFVRRYLNITPGA*WLPAFW Trigger: CCAAAATGCTGGGAGCCACCAGGCACCAGGTGTGAT...ATTAAGGTACCTTCTCACAAACATTTCTAATCTACTGGCTGGAGTGCAGTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR TCA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGTGCTCTTCTTGCCAATaGTTGCTGAGTTCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RRRAGRGGRPMNMFIELMCSSCQ*LLSSSM Trigger: CATGGAAGAACTCAGCAATCATTGGCAAGAAGAGCA...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR CCA 90 bp | TTCCTACTGAATATAACCAGTGCCCTGGGCTCTGCATGGCAGTTGACTTGCCAATTATGTGAACATTCTTaGCTCTATAGGACTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLLNITSALGSAWQLTCQLCEHS*LYRTGV Trigger: GACGCCAGTCCTATAGAGCCAAGAATGTTCACATAA...TTGGCAAGTCAACTGCCATGCAGAGCCCAGGGCACTGGTTATATTCAGTAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR CCA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAGTGGTAGATCACACCTaGTGCCTGGTGGCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFIIFMLRMQESFAPEPLVVDHT*CLVAPS Trigger: GCTGGGAGCCACCAGGCACCAGGTGTGATCTACCAC...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR CCA 90 bp | ATGTTTGTGAGAAGGTACCTTAATGGATGGGCAAGATGGACAGCAGCTATAGTAGCCCTGGGCTCTGCATaGCAGTTGACTTGCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: MFVRRYLNGWARWTAAIVALGSA*QLTCQY Trigger: ATATTGGCAAGTCAACTGCCATGCAGAGCCCAGGGC...TACTATAGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCTTCTCACAAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS-3UTR TCA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGGCAAGACGATCAGCTTaGGTTAGATCACAAACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RRRAGRGGRPMNMFIELMARRSA*VRSQTN Trigger: GTTTGTTTGTGATCTAACTCAAGCTGATCGTCTTGC...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS-3UTR TCA 90 bp | CACCACTGCACTCCAGCCAGTAGATTAGAAATGTTTGTGAGAAGGTACCTTAATGCTGTTTCCCATACCTaGAGCCTAACAGCCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HHCTPASRLEMFVRRYLNAVSHT*SLTANL Trigger: CAGATTGGCTGTTAGGCTTCAGGTATGGGAAACAGC...ATTAAGGTACCTTCTCACAAACATTTCTAATCTACTGGCTGGAGTGCAGTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR TCA 90 bp | TTCCTACTGAATATAACCAGTGCCCTGGGCTCTGCATGGCAGTTGACTTGCCAATATGTGGCAGGGCTGTaGAAATGCTTTTGTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLNITSALGSAWQLTCQYVAGL*KCFCQN Trigger: ATTTTGACAAAAGCATTTTCACAGCCCTGCCACATA...TTGGCAAGTCAACTGCCATGCAGAGCCCAGGGCACTGGTTATATTCAGTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS-3UTR TCA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTACCGAGGCCAGGAGCTTaGGACCAGCTGGAGAACATA | + |
|
Preference number: 4 (lower is better) Translates to: GFIIFMLRMQESFAPEPLPRPGA*DQLENI Trigger: TATGTTCTCCAGCTGGTCTCAAGCTCCTGGCCTCGG...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS-3UTR GCA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTACAGTGCCCTGGGCTCTaGATGGCAGTTGACTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFIIFMLRMQESFAPEPLQCPGL*MAVDLP Trigger: TGGCAAGTCAACTGCCATGCAGAGCCCAGGGCACTG...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR GCA 90 bp | TTCCTACTGAATATAACCAGTGCCCTGGGCTCTGCATGGCAGTTGACTTGCCAAAATGCAAGAAAGCTTTaGGCCAGAACCGTTAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLNITSALGSAWQLTCQNARKL*ARTVKH Trigger: ATGTTTAACGGTTCTGGCGCAAAGCTTTCTTGCATT...TTGGCAAGTCAACTGCCATGCAGAGCCCAGGGCACTGGTTATATTCAGTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS-3UTR CCA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAACACCTGGTGCCTGGTaGCTCCCAGCATTTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFIIFMLRMQESFAPEPLTPGAW*LPAFWE Trigger: CTCCCAAAATGCTGGGAGCCACCAGGCACCAGGTGT...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS-3UTR TCA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGGTGCTTTGCCAAAGATaGTTTAGGCATGTGATGATT | + |
|
Preference number: 4 (lower is better) Translates to: RRRAGRGGRPMNMFIELMVLCQR*FRHVMI Trigger: AATCATCACATGCCTAAATCATCTTTGGCAAAGCAC...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS-3UTR GCA 90 bp | TTCCTACTGAATATAACCAGTGCCCTGGGCTCTGCATGGCAGTTGACTTGCCAAACTGTCTTTCCCAACTaGAGTTCTAGCTTGTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLNITSALGSAWQLTCQTVFPN*SSSLFN Trigger: ATTAAACAAGCTAGAACTGCAGTTGGGAAAGACAGT...TTGGCAAGTCAACTGCCATGCAGAGCCCAGGGCACTGGTTATATTCAGTAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR GCA 90 bp | CACCACTGCACTCCAGCCAGTAGATTAGAAATGTTTGTGAGAAGGTACCTTAATTACAGACTGCACCACTaGACTCCAGCCAGTAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: HHCTPASRLEMFVRRYLNYRLHH*TPASRL Trigger: TAATCTACTGGCTGGAGTGCAGTGGTGCAGTCTGTA...ATTAAGGTACCTTCTCACAAACATTTCTAATCTACTGGCTGGAGTGCAGTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR GCA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGTTTTTATGCTCAGAATaGAAGAAAGCTTTGCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRRAGRGGRPMNMFIELMFLCSE*KKALRQ Trigger: CTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAA...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR TCA 90 bp | GCGCTTTTTCTTTGTCTCCTCAACTACGAAATCATAGAGGGCAAGACGATCAGCGTGCTTTGCCAAAGATaGTTTAGGCATGTGATGATT | + |
|
Preference number: 4 (lower is better) Translates to: ALFLCLLNYEIIEGKTISVLCQR*FRHVMI Trigger: AATCATCACATGCCTAAATCATCTTTGGCAAAGCAC...GCTGATCGTCTTGCCCTCTATGATTTCGTAGTTGAGGAGACAAAGAAAAAGCGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| CDS-3UTR TCA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGCAAACAAACCGTTTGTaGTTCAAAGGAACTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: RRRAGRGGRPMNMFIELMQTNRL*FKGTST Trigger: TGTTGAAGTTCCTTTGAATCACAAACGGTTTGTTTG...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR TCA 90 bp | ATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAAACATTCATGAACTCCTTGCCAATGATTGCTaGGTTCTTCCATGTGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: MLRMQESFAPEPLNIHELLANDC*VLPCAH Trigger: ATGTGCACATGGAAGAACTCAGCAATCATTGGCAAG...GAGTTCATGAATGTTTAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS-3UTR TCA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAAGCATTTTGGGAGGCTaGGGACAGGAGGATCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GFIIFMLRMQESFAPEPLSILGG*GQEDHL Trigger: CAGATGATCCTCCTGTCCTCAGCCTCCCAAAATGCT...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR GCA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGCCTCTTTTCACCCGATaGCACATTTCATTAAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRRAGRGGRPMNMFIELMPLFTR*HISLNS Trigger: ACTATTTAATGAAATGTGGCATCGGGTGAAAAGAGG...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR CCA 90 bp | TTCCTACTGAATATAACCAGTGCCCTGGGCTCTGCATGGCAGTTGACTTGCCAAATGATTGGAATCGTATaGACATATCACAACTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: FLLNITSALGSAWQLTCQMIGIV*TYHNFI Trigger: GATGAAGTTGTGATATGTCCATACGATTCCAATCAT...TTGGCAAGTCAACTGCCATGCAGAGCCCAGGGCACTGGTTATATTCAGTAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR TCA 90 bp | ATGTTTGTGAGAAGGTACCTTAATGGATGGGCAAGATGGACAGCAGCTATAGTAATCCCTTCTATGTCGTaGACACTCAGCATCCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: MFVRRYLNGWARWTAAIVIPSMS*TLSIQI Trigger: TATTTGGATGCTGAGTGTTCACGACATAGAAGGGAT...TACTATAGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCTTCTCACAAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR TCA 90 bp | CACCACTGCACTCCAGCCAGTAGATTAGAAATGTTTGTGAGAAGGTACCTTAATAAAGCAGCAATTTCATaGTTCATCAGTCACTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HHCTPASRLEMFVRRYLNKAAIS*FISHSQ Trigger: TTGGGAGTGACTGATGAATCATGAAATTGCTGCTTT...ATTAAGGTACCTTCTCACAAACATTTCTAATCTACTGGCTGGAGTGCAGTGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR CCA 90 bp | GCGCTTTTTCTTTGTCTCCTCAACTACGAAATCATAGAGGGCAAGACGATCAGCATGATTGGAATCGTATaGACATATCACAACTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ALFLCLLNYEIIEGKTISMIGIV*TYHNFI Trigger: GATGAAGTTGTGATATGTCCATACGATTCCAATCAT...GCTGATCGTCTTGCCCTCTATGATTTCGTAGTTGAGGAGACAAAGAAAAAGCGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| CDS-3UTR CCA 90 bp | ATGTTTGTGAGAAGGTACCTTAATGGATGGGCAAGATGGACAGCAGCTATAGTAAAACTAGATCTTATGTaGCAGGGCTGTGAAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: MFVRRYLNGWARWTAAIVKLDLM*QGCENA Trigger: AGCATTTTCACAGCCCTGCCACATAAGATCTAGTTT...TACTATAGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCTTCTCACAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR CCA 90 bp | ATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAAACATTCATGAACTCAATGGATGGGCAAGATaGACAGCAGCTATAGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: MLRMQESFAPEPLNIHELNGWAR*TAAIVI Trigger: AATTACTATAGCTGCTGTCCATCTTGCCCATCCATT...GAGTTCATGAATGTTTAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR CCA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAAGGTACCTTAATGGATaGGCAAGATGGACAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GFIIFMLRMQESFAPEPLRYLNG*ARWTAA Trigger: AGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCT...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR TCA 90 bp | TTGTCTCCTCAACTACGAAATCATAGAGGGCAAGACGATCAGCTTGAGTTAGATCAAACAAACCGTTTGTaGTTCAAAGGAACTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LSPQLRNHRGQDDQLELDQTNRL*FKGTST Trigger: TGTTGAAGTTCCTTTGAATCACAAACGGTTTGTTTG...ATCTAACTCAAGCTGATCGTCTTGCCCTCTATGATTTCGTAGTTGAGGAGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| CDS-3UTR GCA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTACTCCCAATCCTGATTTaGACCCCTAATCTCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GFIIFMLRMQESFAPEPLLPILI*TPNLSS Trigger: AGATGAGAGATTAGGGGTGCAAATCAGGATTGGGAG...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR CCA 90 bp | TATATGATTTCTTGGTTATGTGAACATTCTTGGCTCTATAGGACTGGCGTCTTCTTATGTGAACATTCTTaGCTCTATAGGACTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: YMISWLCEHSWLYRTGVFLCEHS*LYRTGV Trigger: GACGCCAGTCCTATAGAGCCAAGAATGTTCACATAA...GAAGACGCCAGTCCTATAGAGCCAAGAATGTTCACATAACCAAGAAATCATATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| CDS-3UTR CCA 90 bp | ATGTTTGTGAGAAGGTACCTTAATGGATGGGCAAGATGGACAGCAGCTATAGTAAGCTGTACTCGAAAGTaGCAAATACTTGAAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: MFVRRYLNGWARWTAAIVSCTRK*QILEDH Trigger: ATGATCTTCAAGTATTTGCCACTTTCGAGTACAGCT...TACTATAGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCTTCTCACAAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR GCA 90 bp | GGTTTTATTATTTTTATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTACCTCAATCTACAAGATaGCATGTGCTTTGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFIIFMLRMQESFAPEPLPQSTR*HVLCQR Trigger: TCTTTGGCAAAGCACATGGCATCTTGTAGATTGAGG...TAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCATAAAAATAATAAAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS-3UTR GCA 90 bp | TTATGTGAACATTCTTGGCTCTATAGGACTGGCGTCTTCTTTTATAATCTCGTACCTCAATCTACAAGATaGCATGTGCTTTGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCEHSWLYRTGVFFYNLVPQSTR*HVLCQR Trigger: TCTTTGGCAAAGCACATGGCATCTTGTAGATTGAGG...TACGAGATTATAAAAGAAGACGCCAGTCCTATAGAGCCAAGAATGTTCACATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| CDS-3UTR GCA 90 bp | ATGATTTCTTGGTTATGTGAACATTCTTGGCTCTATAGGACTGGCGTCTTCTTTACTGTCTTTCCCAACTaGAGTTCTAGCTTGTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: MISWLCEHSWLYRTGVFFTVFPN*SSSLFN Trigger: ATTAAACAAGCTAGAACTGCAGTTGGGAAAGACAGT...AAAGAAGACGCCAGTCCTATAGAGCCAAGAATGTTCACATAACCAAGAAATCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| 3UTR CAA 72 bp | CAAGTCTACAAAGAGATCGCTGTCATTTTCAATAATTaGAGAATCAGAGCGCTTTTTCTTTGTCTCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVYKEIAVIFNN*RIRALFLCLLN Trigger: GTTGAGGAGACAAAGAAAAAGCGCTCTGATTCTCAAATTATTGAAAATGACAGCGATCTCTTTGTAGACTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| CDS GCA 90 bp | TCCAACGTCCGGCAGCCGCTCTCCACGAACTCGTTCAGCTCCTCCTaGAGCCGCCGCCGCTCCTCCACAGGTGGAGGCTCGCCCTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: SNVRQPLSTNSFSSS*SRRRSSTGGGSPSI Trigger: TATGGAGGGCGAGCCTCCACCTGTGGAGGAGCGGCGGCGGCTGCAGGAGGAGCTGAACGAGTTCGTGGAGAGCGGCTGCCGGACGTTGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000342415.6 ENST00000634363.1 |
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| CDS-3UTR CAA 90 bp | ATGTTTGTGAGAAGGTACCTTAATGGATGGGCAAGATGGACAGCAGCTATAGTAGCCGAGGCCAGGAGCTaGAGACCAGCTGGAGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: MFVRRYLNGWARWTAAIVAEARS*RPAGEH Trigger: ATGTTCTCCAGCTGGTCTCAAGCTCCTGGCCTCGGC...TACTATAGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCTTCTCACAAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS-3UTR CAA 90 bp | TTCCTACTGAATATAACCAGTGCCCTGGGCTCTGCATGGCAGTTGACTTGCCAAATCCTCTGCCTTCTCTaGCTCTTCTTGCCAATGATT | + |
|
Preference number: 5 (lower is better) Translates to: FLLNITSALGSAWQLTCQILCLL*LFLPMI Trigger: AATCATTGGCAAGAAGAGCAAGAGAAGGCAGAGGAT...TTGGCAAGTCAACTGCCATGCAGAGCCCAGGGCACTGGTTATATTCAGTAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS-3UTR CAA 90 bp | ATGTTTGTGAGAAGGTACCTTAATGGATGGGCAAGATGGACAGCAGCTATAGTACTAGGGGTAGAGGAATaGATTGGGAAAGGGGGTATG | + |
|
Preference number: 5 (lower is better) Translates to: MFVRRYLNGWARWTAAIVLGVEE*IGKGGM Trigger: CATACCCCCTTTCCCAATCAATTCCTCTACCCCTAG...TACTATAGCTGCTGTCCATCTTGCCCATCCATTAAGGTACCTTCTCACAAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS-3UTR CAA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGTTTTCGACTATTGTCTaGATTGATTTTGGCAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RRRAGRGGRPMNMFIELMFSTIV*IDFGSQ Trigger: TTGGCTGCCAAAATCAATCAAGACAATAGTCGAAAA...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS-3UTR CAA 90 bp | CACCACTGCACTCCAGCCAGTAGATTAGAAATGTTTGTGAGAAGGTACCTTAATCTTCTCTTGCTCTTCTaGCCAATGATTGCTGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HHCTPASRLEMFVRRYLNLLLLF*PMIAEF Trigger: GAACTCAGCAATCATTGGCAAGAAGAGCAAGAGAAG...ATTAAGGTACCTTCTCACAAACATTTCTAATCTACTGGCTGGAGTGCAGTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS-3UTR CAA 90 bp | AGAAGACGGGCGGGGCGAGGGGGAAGACCTATGAACATGTTTATAGAATTAATGGAAAATATTTGTATCTaGATCGTGATAGTGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRRAGRGGRPMNMFIELMENICI*IVIVAA Trigger: TGCAGCCACTATCACGATCAAGATACAAATATTTTC...CATTAATTCTATAAACATGTTCATAGGTCTTCCCCCTCGCCCCGCCCGTCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS-3UTR CAA 90 bp | CACCACTGCACTCCAGCCAGTAGATTAGAAATGTTTGTGAGAAGGTACCTTAATCAGAGCGCTTTTTCTTaGTCTCCTCAACTACGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HHCTPASRLEMFVRRYLNQSAFS*SPQLRN Trigger: ATTTCGTAGTTGAGGAGACAAAGAAAAAGCGCTCTG...ATTAAGGTACCTTCTCACAAACATTTCTAATCTACTGGCTGGAGTGCAGTGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000342415.6 |
||
| CDS TCA 90 bp | GCCCATTTTCCTCAATCTACAAGATGCCATGTGCTTTGCCAAAGATaGTTTAGGCATGTGATGATTGGAATCGTATGGACATATCACAAC | + |
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Preference number: 5 (lower is better) Translates to: AHFPQSTRCHVLCQR*FRHVMIGIVWTYHN Trigger: GTTGTGATATGTCCATACGATTCCAATCATCACATGCCTAAATCATCTTTGGCAAAGCACATGGCATCTTGTAGATTGAGGAAAATGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000342415.6 ENST00000634363.1 |
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| CDS-3UTR CAA 90 bp | ATGCTCAGAATGCAAGAAAGCTTTGCGCCAGAACCGTTAAACATTCATGAACTCCTGAGCATTATGTTTTaGAGACCAATCCAGGTTAAT | + |
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Preference number: 5 (lower is better) Translates to: MLRMQESFAPEPLNIHELLSIMF*RPIQVN Trigger: ATTAACCTGGATTGGTCTCAAAAACATAATGCTCAG...GAGTTCATGAATGTTTAACGGTTCTGGCGCAAAGCTTTCTTGCATTCTGAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS CCA 90 bp | ACTTGTCTACATATTAAGAGGAGAGCTGCAGTGAATCTGAGGCCATaGTTTAACACGGCTATACATAACAATATATGGCCATTTTTACTC | + |
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Preference number: 5 (lower is better) Translates to: TCLHIKRRAAVNLRP*FNTAIHNNIWPFLL Trigger: GAGTAAAAATGGCCATATATTGTTATGTATAGCCGTGTTAAACCATGGCCTCAGATTCACTGCAGCTCTCCTCTTAATATGTAGACAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000496946.1 |
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| CDS-3UTR CAA 90 bp | TCTTGGTTATGTGAACATTCTTGGCTCTATAGGACTGGCGTCTTCTTTTATAATCAGAGCGCTTTTTCTTaGTCTCCTCAACTACGAAAT | + |
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Preference number: 5 (lower is better) Translates to: SWLCEHSWLYRTGVFFYNQSAFS*SPQLRN Trigger: ATTTCGTAGTTGAGGAGACAAAGAAAAAGCGCTCTG...ATTATAAAAGAAGACGCCAGTCCTATAGAGCCAAGAATGTTCACATAACCAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| CDS-3UTR CAA 90 bp | TATATGATTTCTTGGTTATGTGAACATTCTTGGCTCTATAGGACTGGCGTCTTCTTTTCGACTATTGTCTaGATTGATTTTGGCAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: YMISWLCEHSWLYRTGVFFSTIV*IDFGSQ Trigger: TTGGCTGCCAAAATCAATCAAGACAATAGTCGAAAA...GAAGACGCCAGTCCTATAGAGCCAAGAATGTTCACATAACCAAGAAATCATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634363.1 |
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| CDS GCA 72 bp | CGGCAGCCGCTCTCCACGAACTCGTTCAGCTCCTCCTaGAGCCGCCGCCGCTCCTCCACAGGTGGAGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: RQPLSTNSFSSS*SRRRSSTGGGS Trigger: CGAGCCTCCACCTGTGGAGGAGCGGCGGCGGCTGCAGGAGGAGCTGAACGAGTTCGTGGAGAGCGGCTGCCG 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000342415.6 ENST00000634363.1 |
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| CDS GCA 72 bp | CCGCTCCTCCACAGGTGGAGGCTCGCCCTCCATAGCTaGAGCCCACCCGCCAAGAGGAAGCGGCCGAACTGC | + |
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Preference number: 6 (lower is better) Translates to: PLLHRWRLALHS*SPPAKRKRPNC Trigger: GCAGTTCGGCCGCTTCCTCTTGGCGGGTGGGCTGCAGCTATGGAGGGCGAGCCTCCACCTGTGGAGGAGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000342415.6 |
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| CDS TCA 72 bp | TTTATGTGGGCTTCTACTCCTATCCCTTCTATGTCGTaGACACTCAGCATCCAAATAGCTTCCACCAGACTG | + |
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Preference number: 6 (lower is better) Translates to: FMWASTPIPSMS*TLSIQIASTRL Trigger: CAGTCTGGTGGAAGCTATTTGGATGCTGAGTGTTCACGACATAGAAGGGATAGGAGTAGAAGCCCACATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000342415.6 ENST00000496946.1 |
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| CDS TCA 72 bp | CCTCAATCTACAAGATGCCATGTGCTTTGCCAAAGATaGTTTAGGCATGTGATGATTGGAATCGTATGGACA | + |
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Preference number: 6 (lower is better) Translates to: PQSTRCHVLCQR*FRHVMIGIVWT Trigger: TGTCCATACGATTCCAATCATCACATGCCTAAATCATCTTTGGCAAAGCACATGGCATCTTGTAGATTGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000342415.6 ENST00000634363.1 |
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| CDS CCA 72 bp | CATATTAAGAGGAGAGCTGCAGTGAATCTGAGGCCATaGTTTAACACGGCTATACATAACAATATATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: HIKRRAAVNLRP*FNTAIHNNIWP Trigger: TGGCCATATATTGTTATGTATAGCCGTGTTAAACCATGGCCTCAGATTCACTGCAGCTCTCCTCTTAATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496946.1 |
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